Organism,Resistance gene,Identity,Query/HSP,Contig,Position in contig,Phenotype,Accession no.,Feature,Group Escherichia_coli_5_172_05_S3_C3_Strain_5_172_05_S3_C3_3,sul1,100.00,927/927,3,6289..7215,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_5_172_05_S3_C3_Strain_5_172_05_S3_C3_3,dfrA5,100.00,474/474,3,5378..5851,Trimethoprim resistance,X12868,prophage,E. coli GI Cluster Escherichia_coli_Strain_702324_10,blaTEM-1B,100.00,861/861,10,87..947,Beta-lactam resistance,JF910132,prophage,E. coli GI Cluster Escherichia_coli_Strain_702324_10,sul1,100.00,927/927,10,6051..6977,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_Strain_702324_10,dfrA7,98.78,570/574,10,7361..7934,Trimethoprim resistance,AJ419170,prophage,E. coli GI Cluster Escherichia_coli_O104_H4_str__Ec11_5603_Strain_Ec11_5603_12,blaTEM-1B,100.00,861/861,12,10906..11766,Beta-lactam resistance,JF910132,prophage,E. coli GI Cluster Escherichia_coli_O104_H4_str__Ec11_5603_Strain_Ec11_5603_13,blaCTX-M-15,100.00,876/876,13,3189..4064,Beta-lactam resistance,DQ302097,prophage,E. coli GI Cluster Escherichia_coli_O104_H4_str__Ec11_5603_Strain_Ec11_5603_13,blaTEM-1B,99.88,861/861,13,6886..7746,Beta-lactam resistance,JF910132,prophage,E. coli GI Cluster Escherichia_coli_O104_H4_str__Ec11_5603_Strain_Ec11_5603_12,sul2,100.00,816/816,12,16484..17299,Sulphonamide resistance,HQ840942,prophage,E. coli GI Cluster Escherichia_coli_O104_H4_str__Ec11_5603_Strain_Ec11_5603_12,sul1,100.00,927/848,12,8802..9649,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_O104_H4_str__Ec11_5603_Strain_Ec11_5603_12,dfrA7,98.78,570/574,12,7845..8418,Trimethoprim resistance,AJ419170,prophage,E. coli GI Cluster Escherichia_coli_O104_H4_str__C227_11_Strain_C227_11_8,strB,100.00,837/837,8,16272..17108,Aminoglycoside resistance,M96392,prophage,E. coli GI Cluster Escherichia_coli_O104_H4_str__C227_11_Strain_C227_11_14,blaCTX-M-15,100.00,876/876,14,3189..4064,Beta-lactam resistance,DQ302097,prophage,E. coli GI Cluster Escherichia_coli_O104_H4_str__C227_11_Strain_C227_11_14,blaTEM-1B,100.00,861/861,14,6886..7746,Beta-lactam resistance,JF910132,prophage,E. coli GI Cluster Escherichia_coli_O104_H4_str__C227_11_Strain_C227_11_8,sul2,100.00,816/816,8,14593..15408,Sulphonamide resistance,HQ840942,prophage,E. coli GI Cluster Escherichia_coli_O104_H4_str__C227_11_Strain_C227_11_8,sul1,100.00,927/848,8,8803..9650,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_O104_H4_str__C227_11_Strain_C227_11_8,dfrA7,98.78,570/574,8,7846..8419,Trimethoprim resistance,AJ419170,prophage,E. coli GI Cluster Escherichia_coli_2871950_Strain_2871950_3,sul1,99.89,927/927,3,8294..9220,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_O104_H4_str__Ec11_4988_Strain_Ec11_4988_13,strB,100.00,837/837,13,16662..17498,Aminoglycoside resistance,M96392,prophage,E. coli GI Cluster Escherichia_coli_O104_H4_str__Ec11_4988_Strain_Ec11_4988_13,blaTEM-1B,100.00,861/861,13,10906..11766,Beta-lactam resistance,JF910132,prophage,E. coli GI Cluster Escherichia_coli_O104_H4_str__Ec11_4988_Strain_Ec11_4988_14,blaCTX-M-15,100.00,876/876,14,3189..4064,Beta-lactam resistance,DQ302097,prophage,E. coli GI Cluster Escherichia_coli_O104_H4_str__Ec11_4988_Strain_Ec11_4988_14,blaTEM-1B,99.88,861/861,14,6886..7746,Beta-lactam resistance,JF910132,prophage,E. coli GI Cluster Escherichia_coli_O104_H4_str__Ec11_4988_Strain_Ec11_4988_13,sul2,100.00,816/816,13,14983..15798,Sulphonamide resistance,HQ840942,prophage,E. coli GI Cluster Escherichia_coli_O104_H4_str__Ec11_4988_Strain_Ec11_4988_13,sul1,100.00,927/848,13,8802..9649,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_O104_H4_str__Ec11_4988_Strain_Ec11_4988_13,dfrA7,98.78,570/574,13,7845..8418,Trimethoprim resistance,AJ419170,prophage,E. coli GI Cluster Escherichia_coli_Strain_102536_12,dfrA15,100.00,474/474,12,7545..8018,Trimethoprim resistance,HM449019,prophage,E. coli GI Cluster Escherichia_coli_Strain_703533_5,blaCTX-M-15,100.00,876/876,5,11561..12436,Beta-lactam resistance,DQ302097,prophage,E. coli GI Cluster Escherichia_coli_LAU_EC8_Strain_LAU_EC8_9,aadA2,100.00,792/792,9,8630..9421,Aminoglycoside resistance,JQ364967,prophage,E. coli GI Cluster Escherichia_coli_LAU_EC8_Strain_LAU_EC8_9,catA1,99.85,660/660,9,1055..1714,Phenicol resistance,V00622,prophage,E. coli GI Cluster Escherichia_coli_LAU_EC8_Strain_LAU_EC8_9,sul1,100.00,927/927,9,9839..10765,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_LAU_EC8_Strain_LAU_EC8_9,dfrA12,100.00,498/498,9,7725..8222,Trimethoprim resistance,AB571791,prophage,E. coli GI Cluster Escherichia_coli_O104_H4_str__Ec11_6006_Strain_Ec11_6006_5,strB,100.00,837/837,5,16389..17225,Aminoglycoside resistance,M96392,prophage,E. coli GI Cluster Escherichia_coli_O104_H4_str__Ec11_6006_Strain_Ec11_6006_5,sul2,100.00,816/816,5,14710..15525,Sulphonamide resistance,HQ840942,prophage,E. coli GI Cluster Escherichia_coli_O104_H4_str__Ec11_6006_Strain_Ec11_6006_5,sul1,100.00,927/848,5,8802..9649,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_O104_H4_str__Ec11_6006_Strain_Ec11_6006_5,dfrA7,98.78,570/574,5,7845..8418,Trimethoprim resistance,AJ419170,prophage,E. coli GI Cluster Escherichia_coli_Strain_S7438_8,blaTEM-1B,100.00,861/861,8,1..861,Beta-lactam resistance,JF910132,prophage,E. coli GI Cluster Escherichia_coli_Strain_S7438_8,catA1,99.85,660/660,8,9946..10605,Phenicol resistance,V00622,prophage,E. coli GI Cluster Escherichia_coli_Strain_S7438_8,sul1,100.00,927/848,8,2118..2965,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_Strain_S7438_8,dfrA7,98.78,570/574,8,3349..3922,Trimethoprim resistance,AJ419170,prophage,E. coli GI Cluster Escherichia_coli_Strain_302312_8,dfrA15,100.00,474/474,8,7545..8018,Trimethoprim resistance,HM449019,prophage,E. coli GI Cluster Escherichia_coli_Strain_100290_PHASTER_9,sul1,100.00,927/927,9,10530..11456,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_Strain_100290_PHASTER_9,dfrA7,98.78,570/574,9,9573..10146,Trimethoprim resistance,AJ419170,prophage,E. coli GI Cluster Escherichia_coli_Strain_200244_PHASTER_5,sul1,100.00,927/927,5,796..1722,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_Strain_200244_PHASTER_5,dfrA15,100.00,474/474,5,3033..3506,Trimethoprim resistance,HM449019,prophage,E. coli GI Cluster Escherichia_coli_O104_H4_str__H112180282_Strain_H112180282_3,sul1,100.00,927/848,3,8802..9649,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_O104_H4_str__H112180282_Strain_H112180282_3,dfrA7,98.78,570/574,3,7845..8418,Trimethoprim resistance,AJ419170,prophage,E. coli GI Cluster Escherichia_coli_1_392_07_S3_C2_Strain_1_392_07_S3_C2_5,dfrA1,100.00,474/474,5,3580..4053,Trimethoprim resistance,X00926,prophage,E. coli GI Cluster Escherichia_coli_P0299917_1_Strain_P0299917_1_1,catA1,99.85,660/660,1,7587..8246,Phenicol resistance,V00622,prophage,E. coli GI Cluster Escherichia_coli_P0299917_1_Strain_P0299917_1_13,sul1,100.00,927/927,13,16350..17276,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_6_319_05_S1_C2_Strain_6_319_05_S1_C2_6,catA1,99.85,660/660,6,4214..4873,Phenicol resistance,V00622,prophage,E. coli GI Cluster Escherichia_coli_6_319_05_S1_C2_Strain_6_319_05_S1_C2_6,sul1,100.00,927/848,6,11854..12701,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_6_319_05_S1_C2_Strain_6_319_05_S1_C2_6,dfrA7,98.78,570/574,6,10897..11470,Trimethoprim resistance,AJ419170,prophage,E. coli GI Cluster Escherichia_coli_1_176_05_S1_C3_Strain_1_176_05_S1_C3_6,catA1,99.83,660/600,6,8598..9197,Phenicol resistance,V00622,prophage,E. coli GI Cluster Escherichia_coli_1_176_05_S1_C3_Strain_1_176_05_S1_C3_6,sul1,100.00,927/848,6,770..1617,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_1_176_05_S1_C3_Strain_1_176_05_S1_C3_6,dfrA7,97.74,570/574,6,2001..2574,Trimethoprim resistance,AJ419170,prophage,E. coli GI Cluster Escherichia_coli_1_250_04_S1_C1_Strain_1_250_04_S1_C1_6,blaTEM-1B,100.00,861/861,6,1601..2461,Beta-lactam resistance,JF910132,prophage,E. coli GI Cluster Escherichia_coli_Strain_VACI_14_1,aadA2,100.00,792/792,1,4609..5400,Aminoglycoside resistance,JQ364967,prophage,E. coli GI Cluster Escherichia_coli_Strain_VACI_14_1,sul1,100.00,927/927,1,5818..6744,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_Strain_VACI_14_1,dfrA12,100.00,498/498,1,3704..4201,Trimethoprim resistance,AB571791,prophage,E. coli GI Cluster Escherichia_coli_Strain_700283_3,blaTEM-1B,100.00,861/861,3,9944..10804,Beta-lactam resistance,JF910132,prophage,E. coli GI Cluster Escherichia_coli_Strain_401031_5,sul1,100.00,927/927,5,9007..9933,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_Strain_401031_5,dfrA7,98.78,570/574,5,8050..8623,Trimethoprim resistance,AJ419170,prophage,E. coli GI Cluster Escherichia_coli_Strain_103447_9,dfrA15,100.00,474/474,9,7545..8018,Trimethoprim resistance,HM449019,prophage,E. coli GI Cluster Escherichia_coli_LAU_EC6_Strain_LAU_EC6_1,blaCTX-M-15,100.00,876/876,1,81779..82654,Beta-lactam resistance,DQ302097,prophage,E. coli GI Cluster Escherichia_coli_O104_H4_str__Ec11_4986_Strain_Ec11_4986_11,sul2,100.00,816/816,11,14983..15798,Sulphonamide resistance,HQ840942,prophage,E. coli GI Cluster Escherichia_coli_O104_H4_str__Ec11_4986_Strain_Ec11_4986_11,sul1,100.00,927/848,11,8802..9649,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_O104_H4_str__Ec11_4986_Strain_Ec11_4986_11,dfrA7,98.78,570/574,11,7845..8418,Trimethoprim resistance,AJ419170,prophage,E. coli GI Cluster Escherichia_coli_Strain_S7380_9,dfrA15,100.00,474/474,9,7545..8018,Trimethoprim resistance,HM449019,prophage,E. coli GI Cluster Escherichia_coli_Strain_703420_5,blaCTX-M-15,100.00,876/876,5,1..876,Beta-lactam resistance,DQ302097,prophage,E. coli GI Cluster Escherichia_coli_Strain_703420_6,blaTEM-1B,100.00,861/861,6,2986..3846,Beta-lactam resistance,JF910132,prophage,E. coli GI Cluster Escherichia_coli_Strain_703420_5,blaTEM-1B,100.00,861/861,5,3698..4558,Beta-lactam resistance,JF910132,prophage,E. coli GI Cluster Escherichia_coli_Strain_703420_6,sul1,100.00,927/927,6,8950..9876,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_Strain_703420_6,dfrA7,98.61,570/574,6,10260..10833,Trimethoprim resistance,AJ419170,prophage,E. coli GI Cluster Escherichia_coli_Strain_702251_11,blaCTX-M-15,100.00,876/876,11,11759..12634,Beta-lactam resistance,DQ302097,prophage,E. coli GI Cluster Escherichia_coli_Strain_702251_11,blaTEM-1B,99.88,861/861,11,8077..8937,Beta-lactam resistance,JF910132,prophage,E. coli GI Cluster Escherichia_coli_Strain_401624_7,sul1,100.00,927/927,7,10510..11436,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_Strain_401624_7,dfrA7,98.78,570/574,7,9553..10126,Trimethoprim resistance,AJ419170,prophage,E. coli GI Cluster Escherichia_coli_3431_Strain_3431_12,tet(A),100.00,1200/1200,12,12571..13770,Tetracycline resistance,AJ517790,prophage,E. coli GI Cluster Escherichia_coli_1_176_05_S1_C2_Strain_1_176_05_S1_C2_5,catA1,99.83,660/600,5,16464..17063,Phenicol resistance,V00622,prophage,E. coli GI Cluster Escherichia_coli_1_176_05_S1_C2_Strain_1_176_05_S1_C2_5,sul2,99.88,816/816,5,2641..3456,Sulphonamide resistance,HQ840942,prophage,E. coli GI Cluster Escherichia_coli_1_176_05_S1_C2_Strain_1_176_05_S1_C2_5,sul1,100.00,927/848,5,8636..9483,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_1_176_05_S1_C2_Strain_1_176_05_S1_C2_5,dfrA7,98.61,570/574,5,9867..10440,Trimethoprim resistance,AJ419170,prophage,E. coli GI Cluster Escherichia_coli_300059_Strain_300059_3,catA1,99.85,660/660,3,8598..9257,Phenicol resistance,V00622,prophage,E. coli GI Cluster Escherichia_coli_300059_Strain_300059_3,sul1,100.00,927/848,3,770..1617,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_300059_Strain_300059_3,dfrA7,98.78,570/574,3,2001..2574,Trimethoprim resistance,AJ419170,prophage,E. coli GI Cluster Escherichia_coli_Strain_SLK172_13,aadA1,100.00,792/792,13,6908..7699,Aminoglycoside resistance,JQ414041,prophage,E. coli GI Cluster Escherichia_coli_Strain_SLK172_13,aadA2,100.00,792/792,13,9313..10104,Aminoglycoside resistance,JQ364967,prophage,E. coli GI Cluster Escherichia_coli_Strain_SLK172_13,dfrA12,100.00,498/498,13,10512..11009,Trimethoprim resistance,AB571791,prophage,E. coli GI Cluster Escherichia_coli_3_020_07_S4_C1_Strain_3_020_07_S4_C1_4,catA1,99.85,660/660,4,8598..9257,Phenicol resistance,V00622,prophage,E. coli GI Cluster Escherichia_coli_3_020_07_S4_C1_Strain_3_020_07_S4_C1_4,sul1,100.00,927/848,4,770..1617,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_3_020_07_S4_C1_Strain_3_020_07_S4_C1_4,dfrA7,98.78,570/574,4,2001..2574,Trimethoprim resistance,AJ419170,prophage,E. coli GI Cluster Escherichia_coli_P0299483_1_Strain_P0299483_1_9,blaTEM-1B,100.00,861/861,9,27883..28743,Beta-lactam resistance,JF910132,prophage,E. coli GI Cluster Escherichia_coli_Strain_MN067_5,aadA2,100.00,792/792,5,16611..17402,Aminoglycoside resistance,JQ364967,prophage,E. coli GI Cluster Escherichia_coli_Strain_MN067_5,catA1,99.85,660/660,5,4041..4700,Phenicol resistance,V00622,prophage,E. coli GI Cluster Escherichia_coli_Strain_MN067_5,sul1,100.00,927/927,5,17820..18746,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_Strain_MN067_5,dfrA12,100.00,498/498,5,15706..16203,Trimethoprim resistance,AB571791,prophage,E. coli GI Cluster Escherichia_coli_str__Deng_Strain_Deng_11,dfrA14,99.59,483/483,11,1597..2079,Trimethoprim resistance,DQ388123,prophage,E. coli GI Cluster Escherichia_coli_Strain_702626_5,catA1,99.85,660/660,5,13371..14030,Phenicol resistance,V00622,prophage,E. coli GI Cluster Escherichia_coli_Strain_702626_5,sul1,100.00,927/927,5,3308..4234,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_Strain_702626_5,dfrA5,100.00,474/474,5,6048..6521,Trimethoprim resistance,X12868,prophage,E. coli GI Cluster Escherichia_coli_Strain_1_10_R8_5,sul1,100.00,927/927,5,6507..7433,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_Strain_1_10_R8_5,dfrA5,100.00,474/474,5,5596..6069,Trimethoprim resistance,X12868,prophage,E. coli GI Cluster Escherichia_coli_BCE001_MS16_Strain_BCE001_MS16_6,aadA1,100.00,792/792,6,2576..3367,Aminoglycoside resistance,JX185132,prophage,E. coli GI Cluster Escherichia_coli_BCE001_MS16_Strain_BCE001_MS16_6,dfrA1,100.00,474/474,6,3460..3933,Trimethoprim resistance,JQ690541,prophage,E. coli GI Cluster Escherichia_coli_3_105_05_S3_C2_Strain_3_105_05_S3_C2_10,catA1,99.85,660/660,10,9946..10605,Phenicol resistance,V00622,prophage,E. coli GI Cluster Escherichia_coli_3_105_05_S3_C2_Strain_3_105_05_S3_C2_10,sul1,100.00,927/848,10,2118..2965,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_3_105_05_S3_C2_Strain_3_105_05_S3_C2_10,dfrA7,98.78,570/574,10,3349..3922,Trimethoprim resistance,AJ419170,prophage,E. coli GI Cluster Escherichia_coli_Strain_203153_8,sul1,100.00,927/927,8,9982..10908,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_Strain_203153_8,dfrA7,98.78,570/574,8,11292..11865,Trimethoprim resistance,AJ419170,prophage,E. coli GI Cluster Escherichia_coli_Strain_14_2_R3_PHASTER_2,tet(A),100.00,1200/1200,2,6471..7670,Tetracycline resistance,AJ517790,prophage,E. coli GI Cluster Escherichia_coli_3_105_05_S3_C1_Strain_3_105_05_S3_C1_9,catA1,99.85,660/660,9,6498..7157,Phenicol resistance,V00622,prophage,E. coli GI Cluster Escherichia_coli_3_105_05_S3_C1_Strain_3_105_05_S3_C1_9,dfrA7,100.00,474/474,9,1..474,Trimethoprim resistance,JF806498,prophage,E. coli GI Cluster Escherichia_coli_3_373_03_S3_C3_Strain_3_373_03_S3_C3_6,strB,100.00,837/837,6,9112..9948,Aminoglycoside resistance,M96392,prophage,E. coli GI Cluster Escherichia_coli_3_373_03_S3_C3_Strain_3_373_03_S3_C3_6,blaTEM-1B,99.88,861/861,6,10669..11529,Beta-lactam resistance,JF910132,prophage,E. coli GI Cluster Escherichia_coli_3_373_03_S3_C3_Strain_3_373_03_S3_C3_6,sul2,100.00,816/816,6,7433..8248,Sulphonamide resistance,GQ421466,prophage,E. coli GI Cluster Escherichia_coli_3_373_03_S3_C3_Strain_3_373_03_S3_C3_6,dfrA14,99.59,483/483,6,952..1434,Trimethoprim resistance,DQ388123,prophage,E. coli GI Cluster Escherichia_coli_Strain_303301_10,aadA1,96.46,792/792,10,21544..22335,Aminoglycoside resistance,JN815078,prophage,E. coli GI Cluster Escherichia_coli_Strain_303301_10,dfrA15,100.00,474/474,10,20969..21442,Trimethoprim resistance,HM449019,prophage,E. coli GI Cluster Escherichia_coli_O104_H4_str__Ec11_4984_Strain_Ec11_4984_7,blaTEM-1B,100.00,861/861,7,10906..11766,Beta-lactam resistance,JF910132,prophage,E. coli GI Cluster Escherichia_coli_O104_H4_str__Ec11_4984_Strain_Ec11_4984_7,sul1,100.00,927/848,7,8802..9649,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_O104_H4_str__Ec11_4984_Strain_Ec11_4984_7,dfrA7,98.78,570/574,7,7845..8418,Trimethoprim resistance,AJ419170,prophage,E. coli GI Cluster Escherichia_coli_2_005_03_S3_C3_Strain_2_005_03_S3_C3_8,aadA2,100.00,792/792,8,12149..12940,Aminoglycoside resistance,JQ364967,prophage,E. coli GI Cluster Escherichia_coli_2_005_03_S3_C3_Strain_2_005_03_S3_C3_8,mph(A),100.00,906/906,8,19595..20500,Macrolide resistance,D16251,prophage,E. coli GI Cluster Escherichia_coli_2_005_03_S3_C3_Strain_2_005_03_S3_C3_8,sul1,100.00,927/927,8,13358..14284,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_2_005_03_S3_C3_Strain_2_005_03_S3_C3_8,dfrA12,100.00,498/498,8,11244..11741,Trimethoprim resistance,AB571791,prophage,E. coli GI Cluster Escherichia_coli_Strain_703200_2,blaTEM-1B,100.00,861/861,2,10818..11678,Beta-lactam resistance,JF910132,prophage,E. coli GI Cluster Escherichia_coli_Strain_703200_2,blaCTX-M-15,100.00,876/876,2,7121..7996,Beta-lactam resistance,DQ302097,prophage,E. coli GI Cluster Escherichia_coli_Strain_102713_12,catA1,99.85,660/660,12,3761..4420,Phenicol resistance,V00622,prophage,E. coli GI Cluster Escherichia_coli_Strain_102713_12,dfrA7,98.78,570/574,12,10444..11017,Trimethoprim resistance,AJ419170,prophage,E. coli GI Cluster Escherichia_coli_Strain_102598_12,blaTEM-1B,100.00,861/861,12,3694..4554,Beta-lactam resistance,JF910132,prophage,E. coli GI Cluster Escherichia_coli_Strain_102598_13,sul1,100.00,927/927,13,4888..5814,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_Strain_102598_13,dfrA7,98.78,570/574,13,6198..6771,Trimethoprim resistance,AJ419170,prophage,E. coli GI Cluster Escherichia_coli_Strain_2009C_3133_6,aadA1,100.00,792/792,6,12509..13300,Aminoglycoside resistance,JN815078,prophage,E. coli GI Cluster Escherichia_coli_Strain_2009C_3133_13,strB,100.00,837/837,13,5486..6322,Aminoglycoside resistance,M96392,prophage,E. coli GI Cluster Escherichia_coli_Strain_2009C_3133_13,blaTEM-1B,100.00,861/861,13,15059..15919,Beta-lactam resistance,JF910132,prophage,E. coli GI Cluster Escherichia_coli_Strain_2009C_3133_6,sul1,100.00,927/927,6,13718..14644,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_Strain_2009C_3133_7,sul1,100.00,927/927,7,255..1181,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_Strain_2009C_3133_6,dfrA1,100.00,474/474,6,11943..12416,Trimethoprim resistance,JQ690541,prophage,E. coli GI Cluster Escherichia_coli_Strain_STEC_757_8,aadA1,100.00,792/792,8,10793..11584,Aminoglycoside resistance,JX185132,prophage,E. coli GI Cluster Escherichia_coli_Strain_STEC_757_8,sul1,100.00,927/927,8,12002..12928,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_Strain_STEC_757_8,dfrA1,100.00,474/474,8,10227..10700,Trimethoprim resistance,JQ690541,prophage,E. coli GI Cluster Escherichia_coli_Strain_702947_3,dfrA7,98.78,570/574,3,2488..3061,Trimethoprim resistance,AJ419170,prophage,E. coli GI Cluster Escherichia_coli_Envira_10_1_Strain_Envira_10_1_10,dfrA1,100.00,474/474,10,2922..3395,Trimethoprim resistance,X00926,prophage,E. coli GI Cluster Escherichia_coli_Strain_400791_8,sul1,100.00,927/848,8,13432..14279,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_Strain_400791_8,dfrA7,98.78,570/574,8,12475..13048,Trimethoprim resistance,AJ419170,prophage,E. coli GI Cluster Escherichia_coli_Strain_300214_12,sul1,100.00,927/848,12,770..1617,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_Strain_300214_12,dfrA7,98.78,570/574,12,2001..2574,Trimethoprim resistance,AJ419170,prophage,E. coli GI Cluster Escherichia_coli_Strain_100197_1,aadA1,96.34,792/792,1,10461..11252,Aminoglycoside resistance,JN815078,prophage,E. coli GI Cluster Escherichia_coli_Strain_100197_1,sul1,100.00,927/927,1,11670..12596,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_Strain_100197_1,tet(A),100.00,1200/770,1,16231..17000,Tetracycline resistance,AJ517790,prophage,E. coli GI Cluster Escherichia_coli_Strain_100197_1,dfrA15,100.00,474/474,1,9886..10359,Trimethoprim resistance,HM449019,prophage,E. coli GI Cluster Escherichia_coli_Strain_S6966_4,catA1,99.85,660/660,4,8598..9257,Phenicol resistance,V00622,prophage,E. coli GI Cluster Escherichia_coli_Strain_S6966_4,sul1,100.00,927/848,4,770..1617,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_Strain_S6966_4,dfrA7,98.78,570/574,4,2001..2574,Trimethoprim resistance,AJ419170,prophage,E. coli GI Cluster Escherichia_coli_5_366_08_S1_C3_Strain_5_366_08_S1_C3_10,sul1,100.00,927/927,10,9854..10780,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_5_366_08_S1_C3_Strain_5_366_08_S1_C3_10,dfrA7,98.61,570/574,10,8897..9470,Trimethoprim resistance,AJ419170,prophage,E. coli GI Cluster Escherichia_coli_3_105_05_S1_C1_Strain_3_105_05_S1_C1_2,sul1,100.00,927/927,2,2344..3270,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_3_105_05_S1_C1_Strain_3_105_05_S1_C1_2,dfrA5,100.00,474/474,2,3708..4181,Trimethoprim resistance,X12868,prophage,E. coli GI Cluster Escherichia_coli_Strain_302137_5,catA1,99.85,660/660,5,6498..7157,Phenicol resistance,V00622,prophage,E. coli GI Cluster Escherichia_coli_Strain_302137_5,dfrA7,100.00,474/474,5,1..474,Trimethoprim resistance,JF806498,prophage,E. coli GI Cluster Escherichia_coli_Strain_102667_9,sul1,100.00,927/927,9,4888..5814,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_Strain_102667_9,dfrA7,98.78,570/574,9,6198..6771,Trimethoprim resistance,AJ419170,prophage,E. coli GI Cluster Escherichia_coli_Strain_703427_2,strB,100.00,837/837,2,6036..6872,Aminoglycoside resistance,M96392,prophage,E. coli GI Cluster Escherichia_coli_Strain_703427_2,sul2,100.00,816/816,2,4357..5172,Sulphonamide resistance,GQ421466,prophage,E. coli GI Cluster Escherichia_coli_Strain_103414_7,blaTEM-1B,100.00,861/861,7,16560..17420,Beta-lactam resistance,JF910132,prophage,E. coli GI Cluster Escherichia_coli_Strain_103414_7,sul1,100.00,927/927,7,10530..11456,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_Strain_103414_7,dfrA7,98.78,570/574,7,9573..10146,Trimethoprim resistance,AJ419170,prophage,E. coli GI Cluster Escherichia_coli_1_392_07_S3_C1_Strain_1_392_07_S3_C1_5,dfrA1,100.00,474/474,5,1908..2381,Trimethoprim resistance,X00926,prophage,E. coli GI Cluster Escherichia_coli_Strain_602687_4,sul1,100.00,927/927,4,6487..7413,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_Strain_602687_4,dfrA7,98.78,570/574,4,5530..6103,Trimethoprim resistance,AJ419170,prophage,E. coli GI Cluster Escherichia_coli_Strain_401588_11,catA1,99.85,660/660,11,5792..6451,Phenicol resistance,V00622,prophage,E. coli GI Cluster Escherichia_coli_Strain_401588_11,dfrA7,98.78,570/574,11,12475..13048,Trimethoprim resistance,AJ419170,prophage,E. coli GI Cluster Escherichia_coli_Strain_401817_11,catA1,99.85,660/660,11,8598..9257,Phenicol resistance,V00622,prophage,E. coli GI Cluster Escherichia_coli_Strain_401817_11,sul1,100.00,927/848,11,770..1617,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_Strain_401817_11,dfrA7,98.78,570/574,11,2001..2574,Trimethoprim resistance,AJ419170,prophage,E. coli GI Cluster Escherichia_coli_2872000_Strain_2872000_15,sul1,100.00,927/927,15,759..1685,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_6_319_05_S1_C1_Strain_6_319_05_S1_C1_6,catA1,99.85,660/660,6,6498..7157,Phenicol resistance,V00622,prophage,E. coli GI Cluster Escherichia_coli_6_319_05_S1_C1_Strain_6_319_05_S1_C1_6,dfrA7,100.00,474/474,6,1..474,Trimethoprim resistance,JF806498,prophage,E. coli GI Cluster Escherichia_coli_Strain_S6662_8,dfrA15,100.00,474/474,8,7545..8018,Trimethoprim resistance,HM449019,prophage,E. coli GI Cluster Escherichia_coli_2_177_06_S4_C3_Strain_2_177_06_S4_C3_16,sul1,100.00,927/848,16,770..1617,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_2_177_06_S4_C3_Strain_2_177_06_S4_C3_16,dfrA7,98.08,570/574,16,2001..2574,Trimethoprim resistance,AJ419170,prophage,E. coli GI Cluster Escherichia_coli_O104_H4_str__H112180280_Strain_H112180280_13,sul1,100.00,927/848,13,8802..9649,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_O104_H4_str__H112180280_Strain_H112180280_13,dfrA7,98.78,570/574,13,7845..8418,Trimethoprim resistance,AJ419170,prophage,E. coli GI Cluster Escherichia_coli_Strain_302042_3,sul2,100.00,816/816,3,46..861,Sulphonamide resistance,GQ421466,prophage,E. coli GI Cluster Escherichia_coli_Strain_203272_4,dfrA15,100.00,474/474,4,1..474,Trimethoprim resistance,HM449019,prophage,E. coli GI Cluster Escherichia_coli_Strain_603030_9,sul1,100.00,927/927,9,9163..10089,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_Strain_603030_9,dfrA7,98.78,570/574,9,8206..8779,Trimethoprim resistance,AJ419170,prophage,E. coli GI Cluster Escherichia_coli_Strain_102550_10,dfrA15,100.00,474/474,10,7545..8018,Trimethoprim resistance,HM449019,prophage,E. coli GI Cluster Escherichia_coli_Strain_401150_7,catA1,99.85,660/660,7,5792..6451,Phenicol resistance,V00622,prophage,E. coli GI Cluster Escherichia_coli_Strain_401150_7,sul1,100.00,927/848,7,13432..14279,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_Strain_401150_7,dfrA7,98.78,570/574,7,12475..13048,Trimethoprim resistance,AJ419170,prophage,E. coli GI Cluster Escherichia_coli_Strain_UC37_6,blaTEM-1B,99.88,861/861,6,3562..4422,Beta-lactam resistance,JF910132,prophage,E. coli GI Cluster Escherichia_coli_3_373_03_S3_C2_Strain_3_373_03_S3_C2_6,dfrA14,99.59,483/483,6,15718..16200,Trimethoprim resistance,DQ388123,prophage,E. coli GI Cluster Escherichia_coli_O104_H4_str__Ec11_5604_Strain_Ec11_5604_8,strB,100.00,837/837,8,16387..17223,Aminoglycoside resistance,M96392,prophage,E. coli GI Cluster Escherichia_coli_O104_H4_str__Ec11_5604_Strain_Ec11_5604_8,sul2,100.00,816/816,8,14708..15523,Sulphonamide resistance,HQ840942,prophage,E. coli GI Cluster Escherichia_coli_O104_H4_str__Ec11_5604_Strain_Ec11_5604_8,sul1,100.00,927/848,8,8527..9374,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_O104_H4_str__Ec11_5604_Strain_Ec11_5604_8,dfrA7,98.78,570/574,8,7570..8143,Trimethoprim resistance,AJ419170,prophage,E. coli GI Cluster Escherichia_coli_Strain_500487_14,strB,100.00,837/837,14,18106..18942,Aminoglycoside resistance,M96392,prophage,E. coli GI Cluster Escherichia_coli_Strain_O177_H21_10,aadA5,100.00,789/789,10,8267..9055,Aminoglycoside resistance,AF137361,prophage,E. coli GI Cluster Escherichia_coli_Strain_O177_H21_10,blaTEM-1B,100.00,861/861,10,19850..20710,Beta-lactam resistance,JF910132,prophage,E. coli GI Cluster Escherichia_coli_Strain_O177_H21_10,catA1,99.85,660/660,10,977..1636,Phenicol resistance,V00622,prophage,E. coli GI Cluster Escherichia_coli_Strain_O177_H21_10,sul1,100.00,927/927,10,9515..10441,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_Strain_O177_H21_10,dfrA17,100.00,474/474,10,7663..8136,Trimethoprim resistance,FJ460238,prophage,E. coli GI Cluster Escherichia_coli_Strain_403418_8,aadA1,96.46,792/792,8,10060..10851,Aminoglycoside resistance,JN815078,prophage,E. coli GI Cluster Escherichia_coli_Strain_403418_8,sul1,100.00,927/927,8,8716..9642,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_Strain_403418_8,tet(A),100.00,1200/1200,8,3950..5149,Tetracycline resistance,AJ517790,prophage,E. coli GI Cluster Escherichia_coli_Strain_403418_8,dfrA15,100.00,474/474,8,10953..11426,Trimethoprim resistance,HM449019,prophage,E. coli GI Cluster Escherichia_coli_Strain_503647_2,sul2,100.00,816/816,2,19806..20621,Sulphonamide resistance,GQ421466,prophage,E. coli GI Cluster Escherichia_coli_Strain_401675_7,catA1,99.85,660/660,7,7214..7873,Phenicol resistance,V00622,prophage,E. coli GI Cluster Escherichia_coli_Strain_401675_7,dfrA7,98.78,570/574,7,624..1197,Trimethoprim resistance,AJ419170,prophage,E. coli GI Cluster Escherichia_coli_Strain_FHI29_2,blaTEM-1B,100.00,861/861,2,19293..20153,Beta-lactam resistance,JF910132,prophage,E. coli GI Cluster Escherichia_coli_Strain_FHI29_3,sul1,100.00,927/927,3,5780..6706,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_2_316_03_S4_C3_Strain_2_316_03_S4_C3_14,dfrA7,98.78,570/574,14,5380..5953,Trimethoprim resistance,AJ419170,prophage,E. coli GI Cluster Escherichia_coli_Strain_403116_9,sul1,100.00,927/848,9,6337..7184,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_Strain_403116_9,dfrA7,98.78,570/574,9,5380..5953,Trimethoprim resistance,AJ419170,prophage,E. coli GI Cluster Escherichia_coli_2_210_07_S3_C1_Strain_2_210_07_S3_C1_2,aadA5,100.00,789/789,2,3950..4738,Aminoglycoside resistance,AF137361,prophage,E. coli GI Cluster Escherichia_coli_2_210_07_S3_C1_Strain_2_210_07_S3_C1_2,catA1,99.85,660/660,2,11366..12025,Phenicol resistance,V00622,prophage,E. coli GI Cluster Escherichia_coli_2_210_07_S3_C1_Strain_2_210_07_S3_C1_2,sul1,100.00,927/927,2,2564..3490,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_2_210_07_S3_C1_Strain_2_210_07_S3_C1_2,dfrA17,100.00,474/474,2,4869..5342,Trimethoprim resistance,FJ460238,prophage,E. coli GI Cluster Escherichia_coli_Strain_ED073_2,strB,100.00,837/837,2,4167..5003,Aminoglycoside resistance,M96392,prophage,E. coli GI Cluster Escherichia_coli_Strain_100714_5,aadA1,96.46,792/792,5,2626..3417,Aminoglycoside resistance,JN815078,prophage,E. coli GI Cluster Escherichia_coli_Strain_100714_5,sul1,100.00,927/927,5,1282..2208,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_Strain_100714_5,dfrA15,100.00,474/474,5,3519..3992,Trimethoprim resistance,HM449019,prophage,E. coli GI Cluster Escherichia_coli_3_105_05_S3_C3_Strain_3_105_05_S3_C3_1,dfrA1,100.00,474/474,1,3580..4053,Trimethoprim resistance,X00926,prophage,E. coli GI Cluster Escherichia_coli_402290_Strain_402290_8,catA1,99.85,660/660,8,4007..4666,Phenicol resistance,V00622,prophage,E. coli GI Cluster Escherichia_coli_402290_Strain_402290_8,sul1,100.00,927/848,8,11647..12494,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_402290_Strain_402290_8,dfrA7,98.78,570/574,8,10690..11263,Trimethoprim resistance,AJ419170,prophage,E. coli GI Cluster Escherichia_coli_LAU_EC9_Strain_LAU_EC9_8,aadA2,100.00,792/792,8,8630..9421,Aminoglycoside resistance,JQ364967,prophage,E. coli GI Cluster Escherichia_coli_LAU_EC9_Strain_LAU_EC9_8,catA1,99.85,660/660,8,1055..1714,Phenicol resistance,V00622,prophage,E. coli GI Cluster Escherichia_coli_LAU_EC9_Strain_LAU_EC9_8,sul1,100.00,927/927,8,9839..10765,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_LAU_EC9_Strain_LAU_EC9_8,dfrA12,100.00,498/498,8,7725..8222,Trimethoprim resistance,AB571791,prophage,E. coli GI Cluster Escherichia_coli_2_005_03_S3_C1_Strain_2_005_03_S3_C1_4,aadA2,100.00,792/792,4,8399..9190,Aminoglycoside resistance,JQ364967,prophage,E. coli GI Cluster Escherichia_coli_2_005_03_S3_C1_Strain_2_005_03_S3_C1_4,mph(A),99.67,921/922,4,839..1760,Macrolide resistance,U36578,prophage,E. coli GI Cluster Escherichia_coli_2_005_03_S3_C1_Strain_2_005_03_S3_C1_4,sul1,100.00,927/927,4,7055..7981,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_Strain_10_1_R1_9,dfrA1,100.00,474/474,9,10453..10926,Trimethoprim resistance,X00926,prophage,E. coli GI Cluster Escherichia_coli_Strain_402310_12,catA1,99.85,660/660,12,8598..9257,Phenicol resistance,V00622,prophage,E. coli GI Cluster Escherichia_coli_Strain_402310_12,sul1,100.00,927/848,12,770..1617,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_Strain_402310_12,dfrA7,98.78,570/574,12,2001..2574,Trimethoprim resistance,AJ419170,prophage,E. coli GI Cluster Escherichia_coli_Strain_S7005_11,blaTEM-1B,100.00,861/861,11,12367..13227,Beta-lactam resistance,JF910132,prophage,E. coli GI Cluster Escherichia_coli_Strain_S7005_11,sul1,100.00,927/927,11,6337..7263,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_Strain_S7005_11,dfrA7,98.78,570/574,11,5380..5953,Trimethoprim resistance,AJ419170,prophage,E. coli GI Cluster Escherichia_coli_Strain_300262_3,catA1,99.85,660/660,3,5778..6437,Phenicol resistance,V00622,prophage,E. coli GI Cluster Escherichia_coli_Strain_300262_3,sul1,99.88,927/848,3,13418..14265,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_Strain_100343_7,dfrA7,100.00,474/474,7,1..474,Trimethoprim resistance,JF806498,prophage,E. coli GI Cluster Escherichia_coli_6_319_05_S1_C3_Strain_6_319_05_S1_C3_4,catA1,99.85,660/660,4,9946..10605,Phenicol resistance,V00622,prophage,E. coli GI Cluster Escherichia_coli_6_319_05_S1_C3_Strain_6_319_05_S1_C3_4,sul1,100.00,927/848,4,2118..2965,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_6_319_05_S1_C3_Strain_6_319_05_S1_C3_4,dfrA7,98.43,570/574,4,3349..3922,Trimethoprim resistance,AJ419170,prophage,E. coli GI Cluster Escherichia_coli_Strain_ECONIH1_10,dfrA14,99.59,483/483,10,2123..2605,Trimethoprim resistance,DQ388123,prophage,E. coli GI Cluster Escherichia_coli_Strain_302555_8,sul1,100.00,927/927,8,16625..17551,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_Strain_302555_8,dfrA7,98.78,570/574,8,15668..16241,Trimethoprim resistance,AJ419170,prophage,E. coli GI Cluster Escherichia_coli_Strain_FHI102_2,blaTEM-1B,99.77,861/861,2,10000..10860,Beta-lactam resistance,JF910132,prophage,E. coli GI Cluster Escherichia_coli_Strain_FHI102_7,blaTEM-1B,100.00,861/861,7,10906..11766,Beta-lactam resistance,JF910132,prophage,E. coli GI Cluster Escherichia_coli_Strain_FHI102_2,blaCTX-M-15,100.00,876/876,2,13682..14557,Beta-lactam resistance,DQ302097,prophage,E. coli GI Cluster Escherichia_coli_Strain_FHI102_2,blaTEM-1B,99.88,861/861,2,8072..8932,Beta-lactam resistance,JF910132,prophage,E. coli GI Cluster Escherichia_coli_Strain_FHI102_7,sul1,100.00,927/848,7,8802..9649,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_Strain_FHI102_7,dfrA7,98.78,570/574,7,7845..8418,Trimethoprim resistance,AJ419170,prophage,E. coli GI Cluster Escherichia_coli_Envira_8_11_Strain_Envira_8_11_11,dfrA1,100.00,474/474,11,2922..3395,Trimethoprim resistance,X00926,prophage,E. coli GI Cluster Escherichia_coli_2_156_04_S3_C3_Strain_2_156_04_S3_C3_8,catA1,99.85,660/660,8,977..1636,Phenicol resistance,V00622,prophage,E. coli GI Cluster Escherichia_coli_2_156_04_S3_C3_Strain_2_156_04_S3_C3_8,sul1,100.00,927/685,8,8617..9301,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_2_156_04_S3_C3_Strain_2_156_04_S3_C3_8,dfrA7,98.78,570/574,8,7660..8233,Trimethoprim resistance,AJ419170,prophage,E. coli GI Cluster Escherichia_coli_2720900_Strain_2720900_13,aadA1,100.00,792/792,13,1737..2528,Aminoglycoside resistance,JX185132,prophage,E. coli GI Cluster Escherichia_coli_2720900_Strain_2720900_3,aadA1,100.00,792/792,3,17615..18406,Aminoglycoside resistance,JN815078,prophage,E. coli GI Cluster Escherichia_coli_2720900_Strain_2720900_12,aadA1,99.87,792/792,12,3999..4790,Aminoglycoside resistance,JQ414041,prophage,E. coli GI Cluster Escherichia_coli_2720900_Strain_2720900_3,sul1,100.00,927/927,3,16271..17197,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_2720900_Strain_2720900_13,dfrA1,99.79,474/474,13,1171..1644,Trimethoprim resistance,JQ690541,prophage,E. coli GI Cluster Escherichia_coli_2720900_Strain_2720900_3,dfrA1,99.79,474/474,3,18499..18972,Trimethoprim resistance,JQ690541,prophage,E. coli GI Cluster Escherichia_coli_2720900_Strain_2720900_12,dfrA1,100.00,474/474,12,3433..3906,Trimethoprim resistance,JQ690541,prophage,E. coli GI Cluster Escherichia_coli_MS_79_10_Strain_MS_79_10_1,catA1,99.85,660/660,1,5086..5745,Phenicol resistance,V00622,prophage,E. coli GI Cluster Escherichia_coli_1_182_04_S1_C1_Strain_1_182_04_S1_C1_4,dfrA5,100.00,474/474,4,7190..7663,Trimethoprim resistance,X12868,prophage,E. coli GI Cluster Escherichia_coli_O104_H4_str__Ec11_4987_Strain_Ec11_4987_7,sul2,100.00,816/816,7,14983..15798,Sulphonamide resistance,HQ840942,prophage,E. coli GI Cluster Escherichia_coli_O104_H4_str__Ec11_4987_Strain_Ec11_4987_7,sul1,100.00,927/848,7,8802..9649,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_O104_H4_str__Ec11_4987_Strain_Ec11_4987_7,dfrA7,98.78,570/574,7,7845..8418,Trimethoprim resistance,AJ419170,prophage,E. coli GI Cluster Escherichia_coli_5_366_08_S1_C1_Strain_5_366_08_S1_C1_7,sul1,99.89,927/927,7,7273..8199,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_5_366_08_S1_C1_Strain_5_366_08_S1_C1_7,dfrA7,98.78,570/574,7,8583..9156,Trimethoprim resistance,AJ419170,prophage,E. coli GI Cluster Escherichia_coli_Strain_402286_3,sul1,100.00,927/848,3,770..1617,Sulphonamide resistance,CP002151,prophage,E. coli GI Cluster Escherichia_coli_Strain_402286_3,dfrA7,98.78,570/574,3,2001..2574,Trimethoprim resistance,AJ419170,prophage,E. coli GI Cluster