>Cottus_rhenanus_12S Alignment of 2 sequences: MF326941.1, NC_036147.1
-------------------------GCTAGCGTAGCTT-AAC-TAAAGCATAACACTGAAGATGTTAAGATGAACCCTAGAAA-GTTCCTCAAGCACAAAGGCTTGGTCCTGACTTTATTATCAACTTTAGCCAAACTTACACATGCAAGTATCCGCACCCCTGTGAGAATGCCCTAATAGTTCCCCG-C--CCGGGAACAAGGAGCTGGTATCAGGCAC----AACCCT----ATTGAGCCCACGACACCTTGCTTAGCCACACCCTCAAGGGAGCTCAGCAGTGATAGACATTAAGCCATAAGTGAAAACTTGACTTAGTTAAAG-CTAAGAGGGCCGGTAAAACTCGTGCCAGCCACCGCGGTTATACGAG-AGGCCCAAGTTGACAAA-CACCGGCGTAAAGCGTGGTTAAGT-TAAA-----AATCATAC---TAAAGCCAAACATCTTCAAGACTGTTATACGTAA-CCGAAG---ATAGGAAGTTCAA--CCACGAAAGTCGCTTTATCTGA----------TCTGAATCCACGAAAGCTAAGGAACAAACT-GGGATTAGATA-CCCCACTATGCCTAGCCCTAAACATTGATAGTA-CAATACAC-CCACTATCCGCCCGGGTACTACGAGCA-ATAGCTTAAAACCCAAAGGACTTGGCGGTGCTTTAGATCCACCTAGAGGAGCCTGTTCTAGAACCGATAACCCCCGTTCAACCTCACCCTTCCTT---GTTTTACCCGCCTATATACCGCCGTCGTCAGCTTACCCTGTGAGGGA-CTAATAGTAAGCAGAACTGGTACAACCT---AA-AACGTCAGGTCGAG-GTGTAGCGTATGGAGGGGGAAGAAATGGGCTACATTCGCTAC--CACAGCGAA-C--ACGAA--TGATGCACTGAAA-TACACAT--CTGAA-GGAGGATTTAGCAGTAAGCTGGAAATAGAGCGTCCCGCTGAAACTGGCCCTGAAGCGCGCACACACCGCCCGTCACTCTCCCCAAAAGCCCC----AA-TCAGTTAACTAAAACCTAATAA-TCAAAAAGGGGAGGCAAGTCGTAACATGGTAAGTGTACCGGAAGGTGCACTTGGTAAAA--TCAGAGCGTGGCTAAGATAGAAAAGCATCTCCC-TTACACTGAGAAGTCACCCGTGCAAGCCGG-GTCGCCCTGATGCCCAACAGCTAG----CCCACCTAAGCAAACACAACAAACCCCCATTAATAACCCCTAAGTACCCTAGTATTTAAATTAAACAAACCATTTTTCCCCCTTAGTATAGGCGATAGAAAAGGACAAAC----GGCGCAATAGAGAGAGTACCGCAAGGGAACGCTGAAAGAGAAATGAAACAACCCAGTGAAGCCTTAAAAAGCAGAGATTAAAGCTCGTACCTTTTGCATCATGATTTAGCAAGTGTACCTCAAGCAAAGCGAACTTTAGTTTGACGTCCCGAAACTACGTGAGCTACTCCAAGACAGCCTAT----TAATAGGGCGTACCCGTCTCTG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>Abramis_brama_12S Alignment of 4 sequences: denovo10, denovo11, AP009305, KC894466
-------------------------GCTAGCGTAGCTTAATA-CAAAGCATAACACTGAAGATGTTAAGATGGGCCCTGAGAA-GCTCCGCATGCATAAAGGCATGGTCCTGACCTTATTATTAGCTTTAACCCAACTTACACATGCAAGTCTCCGCAACCCCGTGAGTATGCCCT--TAATCCCCYACC--CCGGGGACGAGGAGCGGGCATCAGGCAC----AAG-TT-----TTTAGCCCAAGACGCCTGGCCGAGCCACACCCCCAAGGGAATTCAGCAGTGATAAATATTAAGCCATAAGTGAAAACKTGACTCAATCAGGG-TTAAGAGGGCCGGTAAAACTCGTGCCAGCCACCGCGGTTAAACGAG-AGGCCCCAGTTAATRATAC-ACGGCGTAAAGGGTGGTTAAGG-AAAR----TATTAACAA---TAAAGCCGAATGGCCCTTTGGCTGTCATACGC-TTCTAGGT---GTCCGAAGTTCAA-CATACGAAAGTAGCTTTA----ATAACGCCCA-CCTGACCCCACGAAARCTGAGAAACAAACT-GGGATTAGATA-CCCCACTATGCTCAGCCGTAAACCCAGACGTCC-AACTACAATTAGACGTCCGCCCGGGTACTACGAGCA-TTAGCTTGAAACCCAAAGGACCTGACGGTGCCTTAGACCCCCCTAGAGGAGCCTGTTCTAGAACCGATAACCCTCGTTAAACCTCACCACTTCTA---GCCACCCCAGCCTATATACCGCCGTCGTCAGCTTACCCTGTGAAGGTGATAAAAGTAAGCAAAATGGGCACAACCC---AG-AACGTCAGGTCGAG-GTGTAGCGTACGAAGCGGGAAGAAATGGGCTACATTTTCTAC--AATAGAATACT--ACGGA-CATGCAACATGAAA--TAGTGC--TCGAA-GGAGGATTTAGTAGTAAAAAGGAAGCAGAGTGTCCTTTTGAACCCGGCTCTGAGGCGCGTACACACCGCCCGTCACTCTCCCCTGTCAAAAT--GCAATAAAGTTACTTAACACCAACGCG-CTGACAAGGGGAGGCAAGTCGTAACATGGTAAGTGTACCGGAAGGTGTACTTGGACTAAATTCAGGGTGTGGCCGAGTTAGTTAAGCACCTCACNTTACACCGAGAAGACATCCATGCAAATTGGNATCGCCCTGA-GCCAACCAGCTAG-----CTTAATTATTTATA-TAATTTGACAATATTCATA-ACAACACATGGCCTAACACC-A--TAAATTAAACCATTCTTTTACCTAAGTACGGGAGACGGAAAAGGTTCAACCT--AAAGCAATAGAGAAAGTACCGCAAGGGAAAGCTGAAAGAGAAATGAAATAACCCATATAAGCAATGAAAAACAAAGACTAAACCTTGTACCTTTTGCATCATGATTTAGCCAGTA-CCCTCAAGCAAAGAGACCTTTAGTTTGAAACCCCGAAACCAGGTGAGCTACCCCGAGACAGCCTATATTAATTTAGGGCTAACCCGTCTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>Scardinius_erythrophthalmus_12S Scardinius erythrophthalmus mitochondrial DNA, complete genome
-------------------------GCTAGCGTAGCTTAATA-CAAAGCATAACACTGAAGATGTTAAGATGGGCCCTGAGAA-GCTCCGCATGCATAAAGGCATGGTCCTGACCTTATTATTAGCTCTAACCCAACTTACACATGCAAGTCTCCGCAGCCCCGTGAGTATGCCCT--TAATCCCCTG-C--CCGGGGACGAGGAGCGGGCATCAGGCAC----AAA-TT-----TTTAGCCCAAGACGCCTGGCCGAGCCACACCCCCAAGGGAATTCAGCAGTGATAAATATTAAGCCATGAGTGAAAACTTGACTCAGTCAGGG-TTAAGAGGGCCGGTAAAACTCGTGCCAGCCACCGCGGTTAAACGAG-AGGCCCCAGTTAATAATAC-ACGGCGTAAAGGGTGGTTAAGG-AAAG----CA-TAACGA---TAAAGCCGAATGGCCCTTTGGCTGTCATACGC-TTCTAGGT---GTCCGAAGCCCAA-TATACGAAAGTAGCTTTA----GTAAAGCCCA-CCTGACCCCACGAAAGCTGAGAAACAAACT-GGGATTAGATA-CCCCACTATGCTCAGCCATAAACCTAGACGTCC-AGCTACAATTAGACGTCCGCCCGGGTACTACGAGCA-TTAGCTTGAAACCCAAAGGACCTGACGGTGCCTTAGACCCCCCTAGAGGAGCCTGTTCTAGAACCGATAACCCCCGTTAAACCTCACCACTTCTA---GCCACCCCAGCCTATATACCGCCGTCGTCAGCTTACCCTGTGAAGGCAATAAAAGTAAGCAAGATGGGCACAGCCC---AG-AACGTCAGGTCGAG-GTGTAGCGTACGAAGCGGGAAGAAATGGGCTACATTTTCTAC--AATAGAACACT--ACGGA-CATGCAACATGAAA--TAGTGC--TTGAA-GGAGGATTTAGTAGTAAAGAGGAAGCAGAGTGTCCTTTTGAACCCGGCTCTGAGGCGCGTACACACCGCCCGTCACTCTCCCCTGTCAAAAT--GCAATAAAGCTACCTAACAACAGAGCG-CTGACAAGGGGAGGCAAGTCGTAACATGGTAAGTGTACCGGAAGGTGCACTTGGATTAAATTCAGGGCGTGGCTGAGTTAGTTAAGCATCTCAC-TTACACCGAGAAGACATCCATGCAAGTTGG-ATCACCCTGA-GCTAACCAGCTAG-----CTTAATTATTTATA-TAACTTAACAATATTTATA-ACAAAACATGGCCTAATACC-A--TAAACTAAACCATTTTTTTACCTAAGTACGGGAGACGGAAAAGGTTCAACCT--AGAGCAATAGAGAAAGTACCGCAAGGGAAAGCTGAAAGAGAAATGAAACAACCCATATAAGCAATGAAAAACAAAGACTAAGCCTTGTACCTTTTGCATCATGATTTAGCCAGTA-CCCTCGAGCAAAGAGACCTTTAGTTTGAAACCCCGAAACCAGGTGAGCTACCCCGAGACAGCCTATGTTAATTTAGGGCTAACCCGTCTCTGTGGCAAAAGAGTGGGAAGAGCTCCGGGTAGAAGTGACAGACCTA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>Tinca_tinca_12S Alignment of 3 sequences: AB218686, denovo27, denovo28
-------------------------GCTAGCGTAGCTTAATA-CAAAGCATAACACTGAAGATGTTAAGATGGGCCCTGAGAA-GCTCCGCATGCATAAAGGCATGGTCCTGACCTTACTATCAGCTCTTACCCAACTTACACATGCAAGTCTCCGCAGCCCCGTGAGTATGCCCT--TAATCCCCCA-C--CCGGGGACGAGGAGCGGGCATCAGGCAC----AAA-TT-----TTTAGCCCAAGACGCCTGGCCAAGCCACACCCCCAAGGGAATTCAGCAGTGATAAACATTAAGCCATAAGTGAAAACTTGACTCAGTCAGGG-TTAAGAGGGCCGGTAAAACTCGTGCCAGCCACCGCGGTTAAACGAG-AGGCCCTAGTTGATATTACTACGGCGTAAAGGGTGGTTAAGG-AAAG----CA-TTATAA---TAAAGCCRAATGGCCCCTTGGCCGTCATACGC-TTCTRGGT---GCCCGAAGCCCAACCACACGAAAGTAGCTTTA----ACAAAGCCCA-CCTGACCCCACGAAAGCTGAGAAACAAACT-GGGATTAGATA-CCCCACTATGCTCAGCCATAAACCTAGACATCC-ACCTACAATTAGACGTCCGCCCGGGTACTACGAGCA-TTAGCTTGAAACCCAAAGGACCTGACGGTGCCTTAGACCCCCCTAGAGGAGCCTGTTCTAGAACCGATAACCCCCGTTAAACCTCACCACTTCTA---GCCACCCCAGCCTATATACCGCCGTCGTCAGCTTACCCTGTGAAGGCAATAAAAGTAAGCAAAATGGGCACAACCC---AG-AACGTCAGGTCGAG-GTGTAGCGTACGAAGCGGAAAGAAATGGGCTACATTTTCTAT--AATAGAACACT--ACGGA-CATGCAACATGAAA--TAGTGC--TTGAA-GGAGGATTTAGTAGTAAAAAGGAAACAGAGTGTCCTTTTGAACCCGGCTCTGAGGCGCGTACACACCGCCCGTCACTCTCCCCTGTCAAAAC--GCAAAAAATATATTTAATACCAAAGCA-CTGWCAAGGGGAGGCAAGTCGTAACATGGTAAGTGTACCGGAAGGTGCACTTGGATAAAACTCAGGGCGTGGCTGAGTTAGCCAAGCATCTCAC-TTACACCGAGAAGACATCCATGCAAATTGG-ATCACCCTGA-GCCAAATAGCTAG-----CTTAACTACTTATA-TAACCCAACAATATACATA-ACAAAACATGACCTAATAAT-A--AAAACTAAACCATTTTTTTACCTGAGTATGGGAGACAGAAAAGGTTCAACCT--AAAGCAATAGAAAAAGTACCGCAAGGGAAAGCTGAAAGAGAAATGAAACAACCCATATAAGCACTAAAAAACAAAGACTAAACCTTGTACCTTTTGCATCATGATTTAGCCAGCA-CCCTCAAGCAAAGAGACCTTTAGTTTGAAACCCCGAAACCAGGTGAGCTACCCCGAGACAGCCTATA-TAACTTAGGGCTAACCCGTCTCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>Rutilus_rutilus_12S Assembly of 9 reads: FJ188382.1, FJ188384.1, FJ188383.1, DQ455036.1, KY798485.1, DQ447664.1, FJ710983.1, AJ002630.1, AJ002631.1
---------------------GGCCGCTAGCGTAGCTTAATA-CAAAGCATAACACTGAAGATGTTAAGATGGGCCCTGASAA-GCTCCGCATGCATAAAGGCATGGTCCTGACCTTATTATTAGCTCTAACCCAACTTACACATGCAAGYCTCCGCAACCCCGTGAGTATGCCCT--TAATCCCCTG-C--CCGGGGACGAGGAGCGGGCATCAGGCAC----AAA-TT-----TTTAGCCCAAGACGCCTGGCCGAGCCACACCCCCAAGGGAATTCAGCAGTGATAAATATTAAGCCATGAGTGAAAACTTGACTCAGTCAGGG-TTAAGAGGGCCGGTAAAACTCGTGCCAGCCACCGCGGTTAAACGAG-AGGCCCTAGTTAATAATAC-ACGGCGTAAAGGGTGGTTAAGG-GAAG----CA-CAATAA---TAAAGCCAAATGGCCCTTTGGCTGTCATACGC-TTCTAGGT---GTCCGAAGCCCAA-TATACGAAAGTAGCTTTA----ATAAAGCCCA-CCTGACCCCACGAAAGCTGAGAAACAAACT-GGGATTAGATA-CCCCACTATGCTCAGCTATWAACCTAGACGTTC-AGCTACAATTAGACGTCCGCCCGGGTACTACGAGCA-TTAGCTTGAAACCCAAAGGACCTGACGGTGCCTTAGACCCCCCTAGAGGAGCCTGTTCTAGAACCGATAACCCCCGTTAAACCTCACCACTTCTA---GCCACCCCAGCCTATATACCGCCGTCGTCAGCTTACCCTGTGAAGGCAATAAAAGTAAGCAAAATGGGCACAACCC---AG-AACGTCAGGTCGAG-GTGTAGCGTACGAAGCGGGAAGAAATGGGCTACATTTTCTATC-AATAGAACACT--ACGGA-TATGCAACATGAAA--TAGTGC--TTGAA-GGAGGATTTAGTAGTAAAAAGGAAGCAGAGTGTCCTTTTGAACCCGGCTCTGAGGCGCGTACACACCGCCCGTCACTCTCCCCTGTCAAAAT--GCAATGAAGTTACCTAACACTAAAGCG-CTGACGAGGGGAGGCAAGTCGTAACATGGTAAGTGTACCGGAAGGTGCACTTGGATTAAATTCAGGGTGTGGCTGAGTCAGTTAAGCATCTCAC-TTACACCGAGAAGACGTCCATGCAAATTGG-ATCGCCCTGA-GCCA-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>Carassius_auratus_12S Alignment of 12 sequences
-------------------------GCTAGCGTAGCTTAATA-YAAAGCATAGCACTGAAGATGCTAAGATGAGACCTAAAAA-TCTCCGCATGCACAAAGGCATGGTCCCGACCTTATTATCAGCTYTAACTCAACTTACACATGCAAGTCTCCGCACCCCAGTGAATATGCCCT--CAATCCCCCTAC--CCGGGGACGAGGAGCGGGCATCAGGCAC----AAA--T----ATT-AGCCCAAGACGCCTAGCCGAGCCACACCCCCAAGGGAATTCAGCAGTGATAAACATTAAGCCATAAGTGAAAACTTGACTCAGTTAGTG-TTAAGAGGGCCGGTAAAACTCGTGCCAGCCACCGCGGTTAGACGAG-AGGCCCTAGTTGATATTACAACGGCGTAAAGGGTGGTTAAGGATAAA----TAA--A-AA---TAAAGTCAAATGGCCCCTTGGCCGTCATACGC-TTCTAGGC---GTCCGAAGCCCTA--ATACGAAAGTAACTTTA----ATRAA-CCCA-CCTGACCCCACGAAAGCTGAGGAACAAACT-GGGATTAGATA-CCCCACTATGCTCAGCCGTAAACTTAGACATCC-AACTACAA-TAGATGTCCGCCAGGGTACTACGAGCA-TTAGCTTAAAACCCAAAGGACCTGACGGTGTCTCAGATCCCCCTAGAGGAGCCTGTTCTAGAACCGATAACCCCCGTTCAACCTCACCACTTCTA---GCCAACCCAGCCTATATACCGCCGTCGTCAGCTTACCCTGTGAAGGTAATAAAAGTAAGCAAAATGGGTACAACCC---AA-AACGTCAGGTCGAG-GTGTAGCGCATGAAGTGGGAAGAAATGGGCTACATTTTCTAA--CATAGAATATT--ACGAA-CATGCACCATGAAA--CAGTGC--TTGAA-GGAGGATTTAGTAGTAAAAGGGAAATAGAGTGTCCCTTTGAACCCGGCTCTGAGACGCGTACACACCGCCCGTCACTCTCCCCTGTCAAAAT--GCACCAAAAATATCTAATATAATAGCA-CTGACAAGGGGAGGCAAGTCGTAACACGGTAAGTGTACCGGAAGGTGCACTTGGATCAAACCCAGGGTGTGGCTGAGTTAGTCAAGCATCTCAC-TTACACCGAGAAGACATCCATGCAAGTTGG-ATCGCCCTGA-GCCAAACAGCTAG-----CTTAACTACCTA-A-TAACTAAACAATATAAATA-AAATAAGATAGACCTAACACTA--AAAATTAAATCATTCTTTTACCTGAGTATGGGCGACAGAAAAGGTTCCA-C---AAAGCAATAGAAATAGTACCGCAAGGGAAAGCTGAAAGAGAAATGAAATAACCCATATAAGCAATAAAAAGCAAAGATTAAACCTTGTACCTTTTGCATCATGATTTAGCCAGTA-CACCCAAGCAAAGAGACCTTTAGTTTGAAACCCCGAAACCAGGTGAGCTACCCCGAGACAGCCTAT------TGAGGGCCAACCCGTCTCTGTGGCAAAAGAGTGGGAAGAGCT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>Cyprinus_carpio_12S Cyprinus carpio 'wananensis' mitochondrion, complete genome
-------------------------GCTAGCGTAGCTTAACA-CAAAGCATAGCACTGAAGATGCTAAGATGAGTCCTAAAAA-ACTCCGCATGCACAAAGGCATGGTCCCGACCTTATTATCAGCTCTAACTCAACTTACACATGCAAGTCTCCGCAACCCAGTGAATATGCCCT--CAATCCCCCCAC--CCGGGGACGAGGAGCGGGCATCAGGCAC----AAA--C----ATT-AGCCCAAGACGCCTAGCCAAGCCACACCCCCAAGGGAATTCAGCAGTGATAAACATTAAGCCATAAGTGAAAACTTGACCCAGTTAGTG-TTAAGAGGGCCGGTAAAACTCGTGCCAGCCACCGCGGTTAGACGAG-AGGCCCTAGTTGATATTACAACGGCGTAAAGGGTGGTTAAGGATAAA-------CAAAAA---TAAAGTCAAATGGCCCCTTGGCCGTCATACGC-TTCTAGGA---GTCCGAAGCCCTA--ATACGAAAGTAACTTTA----ATAAA-CCCA-CCTGACCCCACGAAAGCTGAGAAACAAACT-GGGATTAGATA-CCCCACTATGCTCAGCCGTAAACTCAGACATCC-AGCTACAATTAGATGTCCGCCAGGGTACTACGAGCA-TTAGCTTAAAACCCAAAGGACCTGACGGTGTCTCAGACCCCCCTAGAGGAGCCTGTTCTAGAACCGATAACCCCCGTTCAACCTCACCACTTCTA---GCCACCCCAGCCTATATACCGCCGTCGTCAGCTTACCCTGTGAAGGTAATAAAAGTAAGCAAAATGGGCACAACCC---AA-AACGTCAGGTCGAG-GTGTAGCGCATGAAGTGGGAAGAAATGGGCTACATTTTCTAA--TATAGAATATT--ACGAA-CATGCACCATGAAA--CAATGC--TTGAA-GGAGGATTTAGTAGTAAAAGGGAAATAGAGTGTCCCTTTGAACCCGGCTCTGAGACGCGTACACACCGCCCGTCACTCTCCCCTGTCAAAAC--GCACCAAAAATACATAATACAACAGCA-CTGACAAGGGGAGGCAAGTCGTAACACGGTAAGTGTACCGGAAGGTGCACTTGGATCAAACCCAGGGTGTGGCTGAGTTAGTCAAGCATCTCAC-TTACACCGAGAAGACATCCATGCAAGTTGG-ATCGCCCTGA-GCCAAACAGCTAG-----CTTAACTACTTA-A-TAACTAAACAATATAAATA-AAACAAAATAAGCCTAACACCA--AAAACTAAACCATTTTTTTACCTGAGTATGGGAGACAGAAAAGGTTCCA-C---AAAGCGATAGAAATAGTACCGCAAGGGAAAGCTGAAAGAGAAATGAAATAACCCATATAAGCACTAAAAAGCAAAGATTAAACCTCGTACCTTTTGCATCATGATTTAGCCAGTA-CACCCAAGCAAAGAGACCTTTAGTTTGAAACCCCGAAACCAGGTGAGCTACCCCGAGACAGCCTAT------TAAGGGCCAACCCGTCTCTGTGGCAAAAGAGTGGGAAGAGCTCCGGGTAGAAGTGACAGACCTACCGAACCTGGTGATAGCTGGTTGCCTAAGAAATGAATAGAAGTTCA--------------------------------------------------------------------------------------------------------------------------------------
>Esox_lucius_12S Alignment of 10 sequences: AY430273, Esox, AP004103, denovo18, denovo19, FJ425098, HM177472, HM177473, HM177474, HM177475
-------------------------GCCCATGTAGTCT-ACT-TAAGATTTAACACTGAAGATGTTAAGATGGGCCCTAGAAA-GTCCCATGAGCACAAAGGCTTGGTCCTGACCTTACTATCAGCTTTAACTAAATTTACACATGCMAGTCTCCGCACCCCTGTGAGGATGCCCT--TAATCCCCTG-C--CCGGGGCTGAGGAGCTGGCATCAGGCAC----ACATT-------GTAGCCCAAGACGCCTTGCTAAGCCACACCCCTACGGGTACTCAGCAGTGATAAATATTAAGTGATAAGCGAAAGCTTGACTTAGTTATTG-TTAAAAGGGCCGGTAAAACTCGTGCCAGCCACCGCGGTTATACGAG-AGGCCCTAGTTGATAAT-TGTCGGCGTAAAGAGTGGTTTAGAAAATA-------ATTTAA---TAAAGCCGAACACCTCCTCAGTTGTTATACACATT-TGAAG---ATATGAAGCCCTR--CCGCGAAAGCAGCTTTAAGTAT----------CCTGAACCCACGACAGCTATGGTACAAACT-GGGATTAGATA-CCCCACTATGCATRGCCATAAATTTTGATAAAA-ATATACAATTT--TATCCGCCAGGGAACTACAAGCA-TCAGCTTAAAACCCAAAGGACTTGGCGGTGCTTCAGACCCACCTAGAGGAGCCTGTTCTATAACCGATAACCCCCGCTTAACCTCACCAGCCCTT---GTTCACCCCGCCTATATACCACCGTCGCCAGCTTATCCTGTGAAGGT-CYCATAATAAGCAAAATGGGTAAAACCC---AG-AACGTCAGGTCGAG-GTGTAGCGCATGAGCTGGGAAGAAATGGGCTACATTTTCTAA--TTCAGAATAT---ACGAA--CTRCACTGTGAAA-CCAGTGC--CCAAA-GGTGGATTTAGCAGTAAACAGAAAATAGAGTGTTCTCTTGAAACTGGCTCTGAAGCGCGCACACACCGCCCGTCACYCTMYCCAAGTTCAAC----CCTATTATTAAATAAAAAATATATC-GAACAAAGGAGAGGCAAGTCGTAACATGGTAAGTGTACCGGAAGGTGCACTTAGTTTAA--TCAGAGTGTAGCTAA-ATAGAAAAGCACCTCCC-TTACACTGAGAAGACACCTGTGCAAATCAG-GTCACCCTGA-GCTGATTAGCTCG-----CCGACACACCCGGATTAAAACCCCRACATATATA-CCCCAACAAACCTTTAAAAAA---ATCAACAAACCATTTTTCCTCCTTAGTATAGGCGATAGAAAAGGAAATAC----CGAGCAATAGAAAAAGTACCGTAAGGGAAAGCTGAAAAAGAAGTGAAACAAGTCATNCAAGCCTKRAAAAGCAGAGACAGAACCTCGTACCTTTTGCATCATGATTTAGCTAGTA-AATCCGAGCAAAGAGCACTTTAGTCCGGACCCCCGAAACTAGACGAGCTACTCCGGGACAGCCTAA-----CATAGGGCCAACCCATCTCTGTGGCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>Perca_fluviatilis_12S Alignment of 9 sequences: PFU87416, AY264822S2, FJ710973, FJ710974, JQ999988, AY141372, FJ620130, KM410088, denovo8
-------------------------GCTAGCGTAGCTT-AAT-TAAAGCATAACACTGAAGATGTTAAGATGGGCCCTAGAAA-GCTNCGCNAGCACNAAGGCTTGGTCCTGACTTTACTATCAACTCTAGCTAAACTTACACATGCAAGTATCCGCATCCCCGTGAGAATGCCCT-ACAGTTCCCTG-C--CCGGGAACAAGGAGCTGGTATCAGGCAC----ACTTCG----ACTAGCCNCATGACACCTTGCTTAGCCACACCCCCAAGGGAACTCAGCAGTGATAGACATTWAGCCRTAAGTGANAACTTGACTTAGTCAAAG-CTAAGAGGGCCGGTAAAACTCGTGCCAGCCACCGCGGTTATACGAG-AGGCCCAAGTTGATAGA-CATCGGCGTAAAGCGTGGTTAAGATTAAA-----GACAATAC---TAAAGCCGAACACCTTCAGAGCTGTTATACGCAT-CCGAAG---GTAAGAAGTTCAA--CCACGAAAGTGGCTTTATAGCC----------CCTGAACCCACGAAAGCTACGATACAAACT-GGGATTAGATA-CCCCACTATGCCTAGCCATAAACATTGGTAGCA-CACTACAC-CCACTACCCGCCTGGGAACTACGAGCA-TCAGCTTGAAACCCAAAGGACTTGGCGGTGCTTTAGATCCACCTAGAGGAGCCTGTTCTAGAACCGATAACCCCCGTTCAACCTCACCTTTCCTT---GTCTCTCCCGCCTATATACCGCCGTCGTCAGCTTACCCTGTGAAGGT-TAAATAGTAAGCAAAATTGGTACAACCT---AA-AACGTCAGGTCGAG-GTGTAGCGTATGGGAAGGGAAGAAATGGGCTACATTTCCTAT--TACAGGAAA-T--ACGAA--TGGTGTACTGAAA-CGTACGC--CTGAA-GGAGGATTTAGCAGTAAGCAGGAAATAGAGCGTCCCGCTGAAATKGGCCCTGAAGCGCGCACACACCGCCCGTCACTCTCCCCAAGCCTACC----AACTAAAATAATTAAAACCCTATAA-TCGCGAAGGGGAGGCAAGTCGTAACATGGTAAGTGTACCGGAAGGTGCACTKNNNNAAA--TCAGAGCGTAGCTAAGACAGAAAAGCATCTCCC-TTACACTGAGAAGTCACCCGTGCAAATCGG-GTCGCCCTKATGCCCAACAGCTAG----CCCCCCTAAACAAAAACAACAACCCCTTATTAAT-ACCMCTAAATACACTAATATTTATATTAAACAAACCATTTTTCCCCCTAAGTATGTGCGACAGAAAAGGGCCTGT----GGAGCGATAGAGAAAGTACCGCAAGGGAACGCTGAAAGAGAAGTGAAATAACCCAGTGAAGCCTAAAAAAGCAGAGATTTTACCTCGTACCTTTTGCATCATGATTTAGCCAGTGTACCCCAAGCAAAGAGCACTTTAGTTTGATAACCCGAAACTAAGTGAGCTACTCCAAGACAGCCTAT----TAATAGGGCAAACCCGTCTCTGTGGCAAAAGAGTGGGAAGAGCTTTGAGTAGAGGTGACAGACCTACCGAACTTAGTTATAGCTGGTTGCCTGGGAATTGGATAGA--------------------------------------------------------------------------------------------------------------------------------------------
>Gasterosteus_aculeatus_12S Alignment of 6 sequences: AY283316, AY283317, AY283318, AP002944, KM273828, KM282418
-------------------------GCTAGCGTAGCTT-AAC-TAAAGCATAACACTGAAGATGTTAAGATGGGCCCTAGAAA-GCCTCGCAAGCACAAAGGCTTGGTCCTGACTTTGACATCAACTTTAGCCAAACTTACACATGCAAGTATCCGCACCCCTGTGAGGATGCCCT-ACAGTTCCCCG-C--CCGGGAACAAGGAGCTGGTATCAGGCAC----ATCTTT-----TTGAGCCCACGACACCTTGCTTAGCCACACCCCCAAGGGAATTCAGCAGTGACAAACATTAAGCTATAAGTGAAAACTTGACTTAGTTAAAG-CTAAGAGGGCCGGTAAAACTCGTGCCAGCCACCGCGGTTATACGAG-AGGCCCAAGTTGATGAA-TTMCGGCGTAAAGAGTGGTTAAGC-TAAA-----ATTAAAAC---TAAAGCCGAACRCCCCCAAAGCTGTTATACGCAT-CCGGAG---GTGAGAAGTTCAA--CCACGAAGGTGGCTTTATYTAA----------CCTGAACCCACGAAAGCTAMGGCACAAACT-GGGATTAGATA-CCCCACTATGCCTAGCCCTAAACATTGATAGAA-TTTTACAA-CCACTATCCGCCCGGGGACTACAAGCA-TCAGCTTGAAACCCAAAGGACTTGGCGGTGCTTTAGATCCACCTAGAGGAGCCTGTTCTAGAACCGATAACCCCCGTTTAACCTCACCTCCCCTT---GTTAATACCGCCTATATACCACCGTCGTCAGCTTACCCTGTGAGGGA-CTAATAGTAAGCTAAACTGGTATAACCC---TA-AACGTCAGGTCGAG-GTGTAGCGTATGAGGAGGGAAGAAATGGGCTACATTCGCTACA-AATAGCGAA-C--ACGAA--TGATGTCCTGAAA-YGTACAT--CTGAA-GGAGGATTTAGCAGTAAGTAGAAAATAGAGTGTTCTACTGAAATTGGCCCTGAAGCGCGCACACATCGCCCGTCACTCTCCCCAAGCCTAAC----AACATAATTACTTAAAAACTAATAA-TTGCAAAGGGGAGGCAAGTCGTAACATAGTAAGTGTACCGGAA-GTGCACTTGGAAAAG---CAGAGCGTAGCTAAGATAGCAAAGCATCTCCC-TTACACTGAGAAGTCATCCGTGCAAATCGG-ATCGCCCTGATGCCTAACAGCTAG----CCCGCCCAAACAATTTCAACGATTCAATCTTGATAACCCCAAAGGACACTTAACTTAAA-TTAAACAAACCATTTTTCCACCTTAGTATAGGCGATAGAAAAGGACATAT----GGCGCTATAGAGAAAGTACCGCAAGGGAACGCTGAAAGAGAAATGAAACAACCCAGACAAGCTAAGAGAAGCAGAGATTTAACCTCGTACCTTTTGCATCATGATTTAGCAAGTGTAACTTAAGCAAAGAGACCTATAGTTTAATGCCCCGAAACTACGTGAGCTACTCCAAGACAGCCTAT----TAATAGGGCACACCCGTCTCTGTTGCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>Gymnocephalus_cernua_12S Alignment of 3 sequences: KM978956, AY141373, denovo3
-------------------------GCTAGCGTAGCTT-AAT-TAAAGCATAACACTGAAGATGTTAAGATGAGCCCTAGAAA-GCTCCGCAAGCACAAAGGCTTGGTCCTGACTTTACTATCAACTCTAGCTAAACTTACACATGCAAGTATCCGCACCCCCGTGAGAATGCCCT-ACAGTTCCCCG-C--CCGGGAACAAGGAGCTGGTATCAGGCAC----ATTCCT----ACTTAGCCCATGACACCTTGCTTAGCCACACCCTCAAGGGAACTCAGCAGTGATAAACATTAAGCCATAAGTGAAAACTTGACTTAGTCAAAG-CTAAAAGGGCCGGTAAAACTCGTGCCAGCCACCGCGGTTATACGAG-AGGCCCAAGCTGATAGA-TATCGGCGTAAAGCGTGGTTAAGATTTTA-----ATATAAAC---TAAAGCCGAACACCTTCAAAGCTGTTATACGCAC-CCGAAG---RTAAGAAGTTCAA--CCACGAAAGTGGCTTTATAACC----------CCTGAACCCACGAAAGCTACGACACAAACT-GGGATTAGATA-CCCCACTATGCYTAGCCGTAAACATTGGTAGCA-CACTACCC-CTACTACCCGCCTGGGAACTACGAGCA-TCAGCTTGAAACCCAAAGGACTNGGCGGTGCTTTAGATCCACCTAGAGGAGCCTGNTCTAGAACCGANAACCCCCGTTCAACCTCACCTTTCCTT---GTYTTTCCCGCCTATATACCGCCGTCGTCAGCTTACCCTGTGAAGGA-TTTATAGTAAGCAAAATTGGTACAACCT---AA-AACGTCAGGTCGAG-GTGTAGCGTATGGGAAGGGAAGAAATGGGCTACATTTCCTAA--AACAGGAAATT--ACGGA--CGATGTACTGAAA-CGTAYAT--CTGAA-GGAGGATTTAGCAGTAAGCAGGAAATAGAGCGTCCAGCTGAAATTGGCCCTGAAGCGCGCACACACCGCCCGTCACTCTCCCCAAGCCTATC----AACTAATATAACTAAAACCTTATAA-TCGCGAAGGGGAGGCAAGTCGTAACATGGTAAGTGTACCGGAAGGTGCACTTGGAAAAA--TCAGAGCGTAGCTAAGATAGAAAAGCATCTCCC-TTACACTGAGAAGTCACCCGTGCAAGTCGG-GTCGCCCTGATGCCCAACAGCTAG-----CCCCTCAACTAGAAACAATAARTCCATATAAAT-ACCCCTTAATACACTAATATTAAT-TTAAACAAACCATTTTTCCCCCTTAGTATGTGCGACAGAAAAGGGMCTGT----GGAGCGATAGAGAAAGTACCGCAAGGGAACGCTGAAAGAGYAATGAAATAACCCAGTGAAGCAGAGAAAWGCAGAGATTTTTCCTCGTACCTTTTGCATCATGATTTAGCCAGTGTAACCCAAGCAAAGCGTACTTTAGTTTGATAACCCGAAACTAAGTGAGCTACTCCAAGACAGCCTAT----TAATAGGGCAAACCCGTCTCTGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>Alburnoides_bipunctatus_12S Alburnoides bipunctatus mitochondrial 12S rRNA gene, partial
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GCTCAGCTATAAACCTAGACGTCC-AGCTACAATTAGACGTCCGCCCGGGTACTACGAGCA-TTAGCTTGAAACCCAAAGGACCTGACGGTGCCTTAGACCCCCCTAGAGGAGCCTGTTCTAGAACCGATAACCCCCGTTAAACCTCACCCCTTCTA---GTCACCCCAGCCTATATACCGCCGTCGTCAGCTTACCCTGTGAAGGCAATAAAAGTAAGCAAAATGGGCACAACCC---AG-AACGTCAGGTCGAG-GTGTAGCGTACGAAGCGGGAAGAAATGGGCTACATTTTCTAC--AATAGAATACT--ACGGA-CATGCAACATGAAA--TAGTGC--TTGAA-GGAGGATTTAGTAGTAAAAAGGAAGCAGCGTGTCCTTTTGAACCCGGCTCTGAGGCGG--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>Blicca_bjoerkna_12S Alignment of 2 sequences: Abramis bjoerkna , Blicca bjoerkna
-------------------------GCTAGCGTAGCTTAATA-CAAAGCATAACACTGAAGATGTTAAGATGGGCCCTGAGAA-GCTCCGCATGCATAAAGGCATGGTCCTGACCTTATTATNNNNTTTAACCCAACTTACACATGCAAGTCTCCGCAACCCCGTGAGTACGCCCT--TAATCCCCCACC--CCGGGGACGAGGAGCGGGCATCAGGCAC----AAG-TT-----TTTAGCCCAAGACGCCTGGCCGAGCCACACCCCCAAGGGAATTCAGCAGTGATAAATATTAAGCCATAAGTGAAAGCTTGACTCAATCAGGG-TTAAGAGGGCCGGTAAAACTCGTGCCAGCCACCGCGGTTAAACGAG-AGGCCCCAGTTAATAATAC-ACGGCGTAAAGGGTGGTTAAGG-AAAG----TA-TAACGA---TAAAGCCGAATRRCCCTTTGGCTGTCATACGC-TTCTAGGT---GTCCGAAGTCCAA-TATACGAAAGTAGCTTTA----ATAGAGCCCA-CCTGACCCCACGAAAGCTGAGAAACAAACT-GGGATTAGATA-CCCCACTATGCTCAGCCGTAAACCCAGACATCC-AACTACAATTAGACGTCCGCCCGGGTACTACGAGCA-TTAGCTTGAAACCCAAAGGACCTGACGGTGCCTTAGACCCCCCTAGAGGAGCCTGTTCTAGAACCGATAACCCTCGTTAAACCTCACCACTTCTA---GCCATCCCAGCCTATATACCGCCGTCGTCRRCTTACCCTGTGAAGGTGATAAAAGTAAGCAAAATGGGCACAACCC---AG-AACGTCAGGTCGAG-GTGTAGCGTACGAAGCGGGAAGAAATGGGCTACATTTTCTAC--AATAGAACACT--ACGGA-CATGCAACATGAAA--TAGTGC--TTGAA-GGAGGATTTAGTAGTAAAAAGGAAGCAGAGTGTCCTTTTGAACCCGGCTCTGAGGCGCGTACACACCGCCCGTCACTCTCCCCTGTCAAAAT--GCAATAAAGTTACTTAACACCAAAGCG-CTGACAAGGGGAGGCAAGTCGTAACATGGTAAGTGTACCGGAAGNTGCACTTGGACTAAATTCAGGGTGTGGCCGAGTTAGTTAAGCACCTCAC-TTACACCGAGAAGACATCCATGCAAATTGG-ATCACCCTGA-GCCAACCAGCTAG-----CTTAACTATTTATA-TAATTTGACAATATTCATA-ACAATACATGGCCTAACACC-A--TAAACTAAACCATTCTTTTACCTAAGTACGGGAGACGGAAAAGGTTCAACCT--AAAGCAATAGAGAAAGTACCGCAAGNGAAAGCTGAAAGAGAAGTGAAACAACCCATATAAGCAATGAAAAACAAAGACTAAACCTTGTACCTTTTGCATCATGATTTAGCCAGCA-CCCTCAAGCGAAGAGACCTTTAGTTTGAAACCCCGAAACCAGGTGAGCTACCCCGAGACAGCCTATGTTAATTTAGGG----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>Leucaspius_delineatus_12S Leucaspius delineatus mitochondrial DNA, complete genome
-------------------------GCTAGCGTAGCTTAATA-CAAAGCATAACACTGAAGATGTTAAGATGGGTCCTGAGAG-GCTCCGCATGCATAAAGGCATGGTCCCGACCTTATTATTAGCTCTAACCCGACTTACACATGCAAGTCTCCGCAACCCCGTGAGTATGCCCT--TAATCCCCTG-C--CCGGGGACGAGGAGCGGGCATCAGGCAC----AAG-TT-----TTTAGCCCAAGACGCCTGGCCAAGCCACACCCCCAAGGGAATTCAGCAGTGATAAATATTAAGCCATGAGTGAAAACTTGACTCAGTCAGGG-TTAAGAGGGCCGGTAAAACTCGTGCCAGCCACCGCGGTTAAACGAG-GGGCCCTAGTTAATGATAC-ACGGCGTAAAGGGTGGTTAAGG-AACG----CA-TTATAA---TAAAGCCGAATGGCCCTTTGGCTGTCATACGC-TTCTAGGT---GTCCGAAGCCCGA-TATACGAAAGTAGCTTTA----ATAGCGCCCA-CCTGACCCCACGAAAGCTGAGAAACAAACT-GGGATTAGATA-CCCCACTATGCCCAGCTATAAACCTAGACGTCC-AGCTACAATTAGACGTCCGCCCGGGTACTACGAGCA-TTAGCTTGAAACCCAAAGGACCTGACGGTGCCTTAGACCCCCCTAGAGGAGCCTGTTCTAGAACCGATAACCCCCGTTAAACCTCACCACTTCTA---GCCACCCCAGCCTATATACCGCCGTCGTCAGCTTACCCTGTGAAGGCAATAAAAGTAAGCAAAATGGGCACAACCC---AG-AACGTCAGGTCGAG-GTGTAGCGTACGAAGCGGGAAGAAATGGGCTACATTTTCTAC--AATAGAACACT--ACGAA-TATGCAACATGAAA--TAGTGC--TTGAA-GGAGGATTTAGTAGTAAAAAGGAAGCAGAGTGTCCTTTTGAACCCGGCTCTGAGGCGCGTACACACCGCCCGTCACTCTCCCCTGTCAAAAT--GCAACAAGGCTACTTAACAACAAAGCG-CTGACAAGGGGAGGCAAGTCGTAACATGGTAAGCGTACCGGAAGGTGCGCTTGGATTAAATTCAGGGCGTGGCTGAGTTAGTTAAGCATCTCAC-TTACACCGAGAAGACATCCATGCAAATTGG-GTCACCCTGA-GCCGACCAGCTAG-----CTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>Leuciscus_idus_12S UNVERIFIED: Leuciscus idus mitochondrion sequence
-------------------------GCTAGCGTAGCTTAATA-CAAAGCATAACACTGAAGATGTTAAGATGGGCCCTGAGAA-GCTCCGCATGCATAAAGGCATGGTCCTGACCTTATTATTAGCTTTAACCCAGCTTACACATGCAAGTCTCCGCAGCCCCGTGAGTATGCCCT--TAATCCCCTG-C--CCGGGGACGAGGAGCGGGCATCAGGCAC----AAA-CT-----TTTAGCCCAAGACGCCTGGCCGAGCCACACCCCCAAGGGAATTCAGCAGTGATAAATATTAAGCCATAAGTGAAAACTTGACTCAGTCAGGGTTTAAGAGGGCCGGTAAAACTCGTGCCAGCCACCGCGGTTAAACGAG-AGGCCCTAGTTAATAATAC-ACGGCGTAAAGGGTGGTTAAGG-AAAG----CA-TAACAA---TAAAGCCGAATGGCCCTTTGGCTGTCATACGC-TTCTAGGT---GTCCGAAGCCCAA-TATACGAAAGTAGCTTTA----ATAAAGCCCA-CCTGACCCCACGAAAGCTGAGAAACAAACT-GGGATTAGATA-CCCCACTATGCTCGGCCATAAACCTAGACGTCC-AGCTACAATTAGACGTCCGCCCGGGTACTACGAGCA-TTAGCTTGAAACCCAAAGGACCTGACGGTGCCTTAGACCCCCCTAGAGGAGCCTGTTCTAGAACCGATAACCCCCGTTAAACCTCACCACTTCTA---GCCACCCCAGCCTATATACCGCCGTCGTCAGCTTACCCTGTGAAGGCAATAAAAGTAAGCAAGATGGGCACAGCCC---AG-AACGTCAGGTCGAG-GTGTAGCGTACGAAGCGGGAAGAAATGGGCTACATTTTCTAC--AATAGAACACT--ACGGA-TATGCAACATGAAA--TAGTGC--TTGAA-GGAGGATCTAGCAGTAAAAAGGAAGCAGAGTGTCCTTTTGAACCCGGCTCTGAGGCGCGTACACACCGCCCGTCACTCTCCCCTGTCAAAAT--GCAATAAAGATATCTAACACCAAAGCG-CTGACAAGGGGAGGCAAGTCGTAACATGGTAAGTGTACCGGAAGGTGCACTTGGATTAAATTCAGGGCGTGGCTGAGTTAGTTAAGCATCTCAC-TTACACCGAGAAGACATCCATGCAAATTGG-ATCGCCCTGA-GCCAACCAGCTA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>Leuciscus_leuciscus_12S Leuciscus leuciscus Dace
--------------------------------------------------------------------------------------------------AAGGCATGGTCCTGACCTTATTATTAGCTTTAACCCAGCTTACACATGCAAGTCTCCGCAACCCCGTGAGTATGCCCT--TAATCCCCTG-C--CCGGGGACGAGGAGCGGGCATCAGGCAC----AAACTT-----TTTAGCCCAAGACGCCTGGCCGAGCCACACCCCCAAGGGAATTCAGCAGTGATAAATATTAAGCCATAAGTGAAAACTTGACTCAGTCAGGGTTTAAGAGGGCCGGTAAAACTCGTGCCAGCCACCGCGGTTAAACGAG-AGGCCCTAGTTAATAATAC-ACGGCGTAAAGGGTGGTTAAGG-AGAG----CA-TAACAA---TAAAGCCGAATGGCCCTTTGGCTGTCATACGC-TTCTAGGT---GTCCGAAGCCCAA-TATACGAAAGTAGCTTTA----ATAAAGCCCA-CCTGACCCCACGAAAGCTGAGAAACAAACT-GGGATTAGATA-CCCCACTATGCTCGGCCGTAAACCTAGACGTCC-AGCTACAATTAGACGTCCGCCCGGGTACTACGAGCA-TTAGCTTGAAACCCAAAGGACCTGACGGTGCCTTAGACCCCCCTAGAGGAGCCTGTTCTAGAACCGATAACCCCCGTTAAACCTCACCACTTCTA---GCCACCCCAGCCTATATACCGCCGTCGTCAGCTTACCCTGTGAAGGCAATAAAAGTAAGCAAGATGGGCACAGCCC---AG-AACGTCAGGTCGAG-GTGTAGCGTACGAAGCGGGAAGAAATGGGCTACATTTTCTAC--AATAGAACACT--ACGGA-CATGCAACATGAAA--TAGTGC--TTGAA-GGAGGATTTAGTAGTAAAAAGGAAGCAGAGTGTCCTTTTGAACCCGGCTCTGAGGCGCGTACACACCGCCCGTCACTCTCCCCTGTCAAAAT--GCAATAAAGATATCTAACACCAAAGCG-CTGACAAGGGGAGGCAAGTCGTAACATGGTAAGTGTACCGGAAGGTGCACTTGGATTAAATTCAGGGTGTGGCTGAGTTAGTTAAGCATCTCAC-TTACACCGAGAAGACATCCATGCAAATTGG-ATCGCCCTGA-GCCAACCAGCTAG-----CTTAATTATTTATA-TAATTTAACACTATTTATA-ACAAAACATGGCCTAACACC-A--TAAACTAAACCATTTTTTTACCTAAGTACGGGAGACGGAAAAGGTCCTACCC--AAAGCAATAGAGAAAGTACCGCAAGGGAAAGCTGAAAGAGAAGTGAAATAACCCATATAAGCAATG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>Alburnus_alburnus_12S Alignment of 3 sequences: denovo12, AJ002629, AB239593
-------------------------GCTAGCGTAGCTTAATA-CAAAGCATAACACTGAAGATGTTAAGATGGGCCCTGAGAA-GCTCCGCATGCATAAAGGCATGGTCCTGACCTTATTATTAGCTCTAACCCAACTTACACATGCAAGTCTCCGCAACCCCGTGAGTATGCCCT--TAATCCCCTG-C--CCGGGGACGAGGAGCGGGCATCAGGCAC----AAA-TT-----TTTAGCCCAAGACGCCTGGCCGAGCCACACCCCCAAGGGAATTCAGCAGTGATAAATATTAAGCCATGAGTGAAAACTTGACTCAGTCAGGG-TTAAGAGGGCCGGTAAAACTCGTGCCAGCCACCGCGGTTAAACGAG-RGGCCCYAGTTAATAATAC-RCGGCGTAAAGGGTGGTTAAGG-AAAG----CA-TAACRA---TAAAGCCGAATGGCCCTTTGGCTGTCATACGC-TTCTAGGT---GTCCGAAGCCCAA-TATACGAAAGTAGCTTTA----ATAAGGCCCA-CCTGACCCCACGAAAGCTGAGGAACAAACT-GGGATTAGATA-CCCCACTATGCTCAGCTATWAACCTAGACGTCC-AGCTACAATTAGACGTCCGCCCGGGTACTACGAGCA-TTAGCTTGAAACCCAAAGGACCTGACGGTGCCTTAGACCCCCCTAGAGGAGCCTGTTCTAGAACCGATAACCCCCGTTAAACCTCACCACTTCTA---GCCACCCCAGCCTATATACCGCCGTCGTCAGCTTACCCTGTGAAGGCAATAAAAGTAAGCAAAATGGGTACAACCC---AGNAACGTCAGGTCGAG-GTGTAGCGTACGAAGCGGGAAGAAATGGGCTACATTTTCTAC--ARTAGAACACT--ACGWA-TATGCAACATGAAA--TAGTGC--TTGAA-GGAGGATTTAGTAGTAAAAAGGAAGCAGAGTGTCCTTTTGANCCCGGCTCTGAGGCGCGTACACACCNCCCGTCACTCTCCCCTGTCAAAAT--GCNATACAGCTACCTAACAACAAAGCG-CTGACAAGGGGAGGCAAGTCGTAACATGGTAAGTGTACCGGAAGGTGCACTTGGATTAAATTCAGGGTGKGGCTGAGTCAGTTAAGCATCTCAC-TTWCACCGAGAAGACATCCATGCAAATTGG-ATCGCCCTGA-GCCAACCAGCTAG-----CTTGATTATTTACG-TAACATAACAATATTCATA-ACAGAACATGGCCTAACACC-A--TAAATTAAACCATTTTCTTGCCCGAGTACGGGAGACGGAAAAGGCTCAACCC--AAAGCAATAGAGAAAGTACCGCAAGGGAAAGCTGAAAGAGAAGTGAAATAACCCATATAAGCAAAAAGAAACAAAGACTAAACCTTGTACCTTTTGCATCATGATTTAGCCAGCA-CCCTCAAGCAAAGAGACCTTTAGTTTGAAACCCCGAAACCAGGTGAGCTACCCCGAGACAGCCTATGTTAATTTAGGGCTAACCCGTCTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>Pimephales_promelas_12S Alignment of 8 sequences: KM282445, AF126355, AF126357, AF126358, AF126360, AF126362, AF126363, AF126364
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG-AGGCCCTAGTTGATATTACAACGGCGTAAAGGGTGGTTAAGG-ACAG----CA-AATCAA---TAAAGTCGAATGGCCCTTTGGCTGTCATACGC-TTCTAGGA---GTCCGAAGCCCAA-TATACGAAAGTAACTTTA----AGAATGCCCA-CCTGACCCCACGAAAGCTGAGAAACAAACT-GGGATTAGATA-CCCCACTATGCTCAGCCATAAACCYAGACGTCC-AACTACAATTAGACGTCCGCCCGGGTACTACGAGCA-TTAGCTTGAAACCCRAAGGACCTGACGGTGCCTYAGACCCCCCTAGAGGAGCCTGTTCTAGAACCGATAACCCYCGTTAAACCTCACCRCTTCTA---GCCAYCCCAGCCTATATACCGCCGTCGTCAGCTTACCCTGTGAAGGCAATAAAAGTAAGCARAATGGGCACARCCC---AG-AACGTCAGGTCGAG-GTGTAGCGTACGAAGCGGGAAGAAATGGGCTACATTTTCTAT--TATAGAAYACT--ACGGA-CATGYAACATGAAA--TAGTRC--TTGAA-GGAGGATTTAGTAGTAAAAAGGAAGCAGMGTGTCCTTTTGAACCCGGCTCTGAGGCGCGTACACACCGCCCGTCACCCTCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>Chondrostoma_nasus_1_12S Chondrostoma nasus 12S ribosomal RNA gene, partial sequence; mitochondrial
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATAC---------T--------------------------------------------------GGGATAGATA-CCCCACTATGCTCAGCTGTAAACCTAGACGTTC-AGCTACAATTAAACGTCCGCCCGGGTACTACGAGCA-TTAGCTTGAAACCCAAAGGACCTGACGGTGCCTTAGACCCCCCTAGAGGAGCCTGTTCTAGAACCGATAACCCCCGTTAAACCTCACCGCTTCTA---GCCACCCCAGCCTATATACCGCCGTCGTCAGCTTACCCTGTGAAGGCAATAAAAGTAAGCAAAATGGGCACAACCC---AG-AACGTCAGGTCGAG-GTGTAGCGTACGGAGCGGGAAGAAATGGGCTACATTTTCTACT-AGCAGAACACT--ACGGA-CATGCAACATGAAA--TAGTGC--TTGAA-GGAGGATTTAGTAGTAAAAAGGAAGCAGAGTGTCCTTTTGAACCCGGCTCTGAGGCGCGTACACACCGCCC-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>Leuciscus_rutilus_12S Leuciscus rutilus 12S ribosomal RNA, tRNA-Val and 16S ribosomal RNA genes, mitochondrial genes for mitochondrial RNAs, complete sequence
------------------------------------------------------------------------------------------------TAAAGGCATGGTCCTGACCTTATTATTAGCTCTAACCCAACTTACACATGCAAGTCTCCGCAACCCCGTGAGTATGCCCT--TAATCCCCTG-C--CCGGGGACGAGGAGCGGGCATCAGGCAC----AAA-TT-----TTTAGCCCAAGACGCCTGGCCGAGCCACACCCCCAAGGGAATTCAGCAGTGATAAATATTAAGCCATGAGTGAAAACTTGACTCAGTCAGGG-TTAAGAGGGCCGGTAAAACTCGTGCCAGCCACCGCGGTTAAACGAG-AGGCCCTAGTTAATAATAC-ACGGCGTAAAGGGTGGTTAAGG-GAAG----CA-CAATAA---TAAAGCCAAATGGCCCTTTGGCTGTCATACGC-TTCTAGGT---GTCCGAAGCCCAA-TATACGAAAGTAGCTTTA----ATAAAGCCCA-CCTGACCCCACGAAAGCTGAGAAACAAACT-GGGATTAGATA-CCCCACTATGCTCAGCTATAAACCTAGACGTTC-AGCTACAATTAGACGTCCGCCCGGGTACTACGAGCA-TTAGCTTGAAACCCAAAGGACCTGACGGTGCCTTAGACCCCCCTAGAGGAGCCTGTTCTAGAACCGATAACCCCCGTTAAACCTCACCACTTCTA---GCCACCCCAGCCTATATACCGCCGTCGTCAGCTTACCCTGTGAAGGCAATAAAAGTAAGCAAAATGGGCACAACCC---AG-AACGTCAGGTCGAG-GTGTAGCGTACGAAGCGGGAAGAAATGGGCTACATTTTCTATC-AATAGAACACT--ACGGA-TATGCAACATGAAA--TAGTGC--TTGAA-GGAGGATTTAGTAGTAAAAAGGAAGCAGAGTGTCCTTTTGAACCCGGCTCTGAGGCGCGTACACACCGCCCGTCACTCTCCCCTGTCAAAAT--GCAATGAAGTTACCTAACACTAAAGCG-CTGACGAGGGGAGGCAAGTCGTAACATGGTAAGTGTACCGGAA-GTGCACTTGGATTAAATTCAGGGTGTGGCTGAGTCAGTTAAGCATCTCAC-TTACACCGAGAAGACGTCCATGTAAATTGG-ATCGCCCTGA-GCCAACCAGCTAG-----CTTAATTATTTATA-TAATTTTACAGTATTTATA-ACAAGACATGGCCTAACACC-A--TAAACTAAACCATTTTTTTACCTAAGTACGGGAGACGGAAAAGGTTCAACCC--AAAGCAATAGAGAAAGTACCGCAA-GGAAAGCTGAAAGAGAAGTGAAACAACCCATATAAGCAATGAAAAACAAAGACTAAACCTTGTACCTTTTGCATCATGATTTAGCCAGCA-CCCTCAAGCAAAGAGACCTTTAGTTTGAAACCCCGAAACCAGGTGAGCTACCCCGAGACAGCCTAT--TAATTTAGGGCTAACCCGTCTCTGTGGCAAAAGAGTGGGAAGAGCTCCGGGTAGAAGTGACAGACCTACCGAACCTGGTGATAGCTGGTTGCCTGAGAAGTGGATAGAAGTTCAGCCTCGTATACCCCAAACCAAAGAATACACTACCAAGGTGCTCAGGGAAATACACGAGAGTTAGTTGAAGGGGGTACAGCCCCTTTAACAAAGGATACAACCTTTACAGGAGGATAAAGATCATAA--------
>Leuciscus_cephalus_12S Alignment of 3 sequences: denovo5, denovo6, Y12667
-----------------------------------------------------------------------------------------------------GCATGGTCCTGACCTTATTATTAGCTCTAACCCAACTTACACATGC-AGTCTCCGCAACCCCGTGAGTATGCCCT--TAATCCCCTA-C--CCGGGGACGAGGAGCGGGCATCAGGCAC----AAA-TT-----TTTAGCCCAAGACGCCTGGCCAAGCCACACCCCCAAGGGAATTCAGCAGTGATAAATATTAAGCCATAAGTGAAAACTTGACTCAGTCAGGG-TTAAGAGGGCCGGTAAAACTCGTGCCAGCCACCGCGGTTAAACGAG-AGGCCCTAGTTAATAATAC-ACGGCGTAAAGGGTGGTTAAGG-GAAA----CA-TAACAA---TAAAGCCGAATGGCCCTTTGGCTGTCATACGC-TTCTAGGT---GTCCGAAGCCCAA-TATACGAAAGTAGCTTTA----ATAAAGTCCA-CCTGACCCCACGAAAGCTGAGRAACAAACT-GGGATTAGATA-CCCCACTATGCTCAGCCATAAACCTCGACGTCC-AACTACAATTAGACGTCCGCCCGGGTACTACGAGCA-TTAGCTTGAAACCTAAAGGACCTGACGGTGCCTTAGACCCCCCTAGAGGAGCCTGTTCTAGAACCGATAACCCCCGTTAAACCTCACCACTTCTA---GCCACCCCAGCCTATATACCGCCGTCGTCAGCTTACCCTGTGAAGGCAATAAAAGTAAGCAAAATGGGCACAACCC---AG-AACGTCAGGTCGAG-GTGTAGCGTACGAAGCGGGAAGAAATGGGCTACATTTTCTACT-AACAGAACACT--ACGGA-CATGCAACATGAAA--TAGTGC--TTGAA-GGAGGATTTAGTAGTAAAAAGGAAGCAGAGTGTCCTTTTGAACCCGGCTCTGAGGCGSGTACACACCGCCCGTCACTCTCCCCTGTCAAAAT--GCAATAAAGTTACCTAACACCAAAGCG-CTGACAAGGGGAGGCAAGTCGTAACATGGTAAGTGTACCGGAAGGTGCACTTGGATTAAATTCAGGGCGTGGCTGAGTCAGTCAAGCATCTCAC-TTACACCGAGAAGACATCCATGCAAATTGG-GTCGCCCTGA-GCCAACCAGCTAG-----CTTAATTATTTATA-TAATTTTACAATATTTATA-ACAAAACATGGCCTAACACC-A--TAAACTAAACCATTTTTTTACCTAAGTACGGGAGACGGAAAAGGTTCAGCCCT-AAAGCAATAGAAAAAGTACCGCAAGGGAAAGCTGAAAGAGAACTGAAATAACCCATATAAGCA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>Aristichthys_nobilis_12S Aristichthys nobilis 12S ribosomal RNA gene, complete sequence; mitochondrial gene for mitochondrial product
------------------------------------------------------------------------------------------------TAAAGGCATGGTCCTGACCTTATTATCAGCTCTTACCCGACTTACACATGCAAGTCTCCGCAATCCCGTGAGTATGCCCT--CAATCCCCCG-C--CCGGGGACGAGGAGCGGGCATCAGGCAC----AAA--T-----TTTAGCCCAAGACGCCTGGCCAAGCCACACCCCCAAGGGAATTCAGCAGTGATAAACATTAAGCCATAAGTGAAAACTTGACTCAGTCAGGG-TTAAGAGGGCCGGTAAAACTCGTGCCAGCCACCGCGGTTAAACGAG-AGGCCCTAGTTGATAAAACCACGGCGTAAAGGGTGGTTAAGG-AAAG----CA-AAACAAA-TTAAAGCCAAATGGCCCTTTGGCCGTCATACGC-TTCTAGGT---GTCCGAAGCCCAATTATACGAAAGTAGCTTTA----TTAAAGCCCACCCTGACCCCACGAAAGCTGAGAAACAAACT-GGGATTAGATACCCCCACTATGCTCAGCCATAAACCTAGACATCC-AACTACAATTAGACGTCCGCCTGGGTACTACGAGCA-TTAGCTTGAAACCCAAAGGA-CTGACGGTGCCTTAGACCCCCCTAGAGGAGCCTGTTCTAGAACCGATAACCCCCGTTAAACCTCACCACTTCTA---GCCATCCCAGCCTATATACCGCCGTCGTCAGCTTACCCTGTGAAGGCAATAAAAGTAAGCAAAATGGGCACAACCC---AG-AACGTCAGGTCGAG-GTGTAGCGTACGAAGTGGGAAGAAATGGGCTACATTTTCTAT--CACAGAACACT--ACGAA-CATGCAACATGAAA--TAGTGC--TTGAA-GGAGGATTTAGTAGTAAAAAGGAAGCAGAGTGTCCTTTTGAACTCGGCTCTGAGGCGCGTACACACCGCCCGTCACTCTCCCCTGTCAAAAC--GCAACAAAGATACATAACACTAAAGCA-CTGACAAGGGGAGGCAAGTCGTAACATGGTAAGTGTACCGGAAGGTGCACTTGGA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>Ctenopharyngodon_idella_12S Alignment of 6 sequences: AY897013, KC292921, KC292922, EU391390, HQ891005, JQ231115
-------------------------GCTAGCGTAGCTTAATA-TAAAGCATAACACTGAAGATGTTAAGATGGGTCCTAAGAA-ACTCCGCATGCACAAAGGCATGGTCCTGACCTTATTATCAGCTCTTACCCAACTTACACATGCAAGTCTCCGCAATCCCGTGAGTATGCCCT--CAATCCCCCG-C--CCGGGGACGAGGAGCGGGCATCAGGCAC----AAA--T-----TTTAGCCCAAGACGCCTGGCCAAGCCACACCCCCAAGGGAATTCAGCAGTGATAAACATTAAGCCATAAGTGAAAACTTGACTCAGTCAGGG-TTAAGAGGGCCGGTAAAACTCGTGCCAGCCACCGCGGTTAAACGAG-AGGCCCCAGTTGATAACACCACGGCGTAAAGGGTGGTTAAGG-AAAG----CA-AAACAA---TAAAGCCAAATGGCCCTTTGGCCGTCATACGC-TTCTAGGT---GTCCGAAGCCCGATCATACGAAAGTAGCNTTA----ACAAAGCCCA-CCTGACCCCACGAAAGCTGAGAAACAAACT-GGGATTAGATA-CCCCACTATGCTCAGCCATAAACCTAGACATCC-AACTACAATTAAACGTCCGCCCGGGTACTACGAGCA-TTAGCTTGAAACCCAAAGGACCTGACGGTGCCTTAGACCCCCCTAGAGGAGCCTGTTCTAGAACCGATAACCCCCGTTAAACCTCACCACTTCTA---GCCATCCCAGCCTATATACCGCCGTCGTCAGCTTACCCTGTGAAGGCAATAAAAGTAAGCAAAATGGGCACAACCC---AG-AACGTCAGGTCGAG-GTGTAGCGTACGAAGTGGGAAGAAATGGGCTACATTTTCTAT--CACAGAACACT--ACGAA-CATGCAACATGAAA--TAGTGC--TTGAA-GGAGGATTTAGTAGTAAAAAGGAAGCAGAGTGTCCTTTTGAACCCGGCTCTGAGGCGCGTACACACCGCCCGTCACTCTCCCCTGTCAAAAC--GCAACAAAGATACTTAACACTAAAGCA-CTGACAAGGGGAGGCAAGTCGTAACATGGTAAGTGTACCGGAAGGTGCACTTGGATTAAACCCAGGGCGTGGCTGAGTCAGTTAAGCATCTCAC-TTACACCGAGAAGACATCCATGCAAATTGG-ATCACCCTGA-GCCAAACAGCTAG-----CTTAACCACTAATA-TAACCCAACAATGTTAATA-ACAAAACATGACCTAACATC-A--CAAACTAAACCATTTTTTTACCTGAGTATGGGAGACAGAAAAGGTTCAACTT--AAAGCAATAGAAAAAGTACCGCAAGGGAAAGCYGAAAGAGAAATGAAACAACCCATATAAGCACTAAAAAACAAAGAYTAAACCTTGTACCTTTTGCATCATGATTTAGCCAGCA-CCCTCAAGCAAAGAGACCTTTAGTTTGAAACCCCGAAACCAGGTGAGCTACCCCGAGACAGCCTATTTAAATTTAGGGCTAACCCGTCTCTGTGGCAAAAGAGTGGGAAGAGCTCCGGGTAGAAGTGACAGACCTACCGAACCTGGTGATAGCTGGTTGCCTGAGAAATGGATAGAAGTTCAGCCTCGCACACCCCAAATCAAAAACATAACATCAAGACAATRAGGGAAATATACGAGAGTTAGTTAAAGGGGGTACAGCCCCTCTAACAAAGGATACAACCTTTACAGGAGGATAA------------------
>Hypophthalmichthys_molitrix_12S Alignment of 22 sequences
------------------------------CGTAGCTTAATT-TAAAGCATAACACTGAAGATGTTAAGATGGGTCCTAAGAA-ACTCCGCATGCACAAAGGCATGGTCCTGACCTTATTATCAGCTCTTACCCGACTTACACATGCAAGTCTCCGCAATCCCGTGAGTATGCCCT--CAATCCCCTG-C--CCGGGGACGAGGAGCGGGCATCAGGCAC----AAA--T-----TTTAGCCCAAGACGCCTGGCCAAGCCACACCCCCAAGGGAATTCAGCAGTGATAAACATTAAGCCATAAGTGAAAACTTGACTCAGTCAAGG-TAAAGAGGGCCGGTAAAACTCGTGCCAGCCACCGCGGTTAAACGAG-AGGCCCTAGTTGATAAAACCACGGCGTAAAGGGTGGTTAAGG-AAAG----CA-AANCAAANTTAAAGCCAAATGGCCCTTTGGCCGTCATACGC-TTCTAGGT---GTCCGAAGCCCAATTATACGAAAGTAGCTTTA----TNAAAGCCCA-CCTGACCCCACGAAAGCTGAGAAACAAACT-GGGATTAGATA-CCCCACTATGCTCAGCCATAAACCTAGACATCC-AACTACAATTAGACGTCCGCCCGGGTACTACGAGCA-TTAGCTTGAAACCCAAAGGACCTGACGGTGCCTTAGACCCCCCTAGAGGAGCCTGTTCTAGAACCGATAACCCCCGTTAAACCTCACCACTTCTA---GCCATCCCAGCCTATATACCGCCGTCGTCAGCTTACCCTGTGAAGGCAATAAAAGTAAGCAAAATGGGCACAACCC---AG-AACGTCAGGTCGAG-GTGTAGCGTACGAAGTGGGAAGAAATGGGCTACATTTTCTAT--CACAGAACACT--ACGAA-CATGCAACATGAAA--TAGTGC--TTGAA-GGAGGATTTAGTAGTAAAAAGGAAGCAGAGTGTCCTTTTGAACYCGGCTCTGAGGCGCGTACACACCGCCCGTCACTCTCCCCTGTCAAAAC--GCAACAAAGATACTTAACACTAAAGCA-CTGACAAGGGGAGGCAAGTCGTAACATGGTAAGTGTACCGGAAGGTGCACTTGGATTAAACCCAGGGYGTGGCTGAGTCAGTCAAGCATCTCAC-TTACACCGAGAAGACATCCATGCAAATTGG-ATCRCCCTGA-GCCAAACAGCTAG-----CTTAACCACTAATA-TAACCCAACAATGTTAATA-ACAAAACATGACCTAACACC-A--TAAACTAAACCATTTTTTTACCTGAGTATGGGAGACAGAAAAGGTTCAACCT--AAAGCAATAGAAAAAGTACCGCAAGGGAAAGCTGAAAGAGAAATGAAACAACCCATATAAGCAYTAAAAAACAAAGACTAAACCTTGTACCTTTTGCATCATGATTTAGCCAGCA-CCCTCAAGCAAAGAGACCTTTAGTTTGAAACCCCGAAACCAGGTGAGCTACCCCGAGACAGCCTATTAAAATTTAGGGCTAACCCGTCTCTGTGGCAAAAGAGTGGGAAGAGCTCCGGGTAGAAGTGACAGACCTACCGAACCTGGTGATAGCTGGTTGCCTGAGAAATGGATAGAAGTTCAGCCTCGTACRCCCCAAATCAAAAAC-------------------------------------------------------------------------------------------------------------
>Hypophthalmichthys_nobilis_12S Alignment of 9 sequences: KJ729077, KJ729078, KJ679504, KJ756343, KC292939, KC292942, KC292943, EU343733, HM162839
-------------------------GCTAGCGTAGCTTAATT-TAAAGCATAACACTGAAGATGTTAAGATGGGTCCTAAGAA-ACTCCGCATGCATAAAGGCATGGTCCTGACCTTATTATCMGCTCTTACCCGACTTACACATGCAAGTCTCCGCAATCCCGTGAGTATGCCCT--CAATCCCCCG-C--CCGGGGACGAGGAGCGGGCATCAGGCAC----AAA--T-----TTTAGCCCAAGACGCCTGGCCAAGCCACACCCCCAAGGGAATTCAGCAGTGATAAACATTAAGCCATAAGTGAAAACTTGACTCAGTCAGGG-TTAAGAGGGCCGGTAAAACTCGTGCCAGCCACCGCGGTTAAACGAG-AGGCCCTAGTTGATAAAACCACGGCGTAAAGGGTGGTTAAGG-AAAG----CA-AARCAAA-TTAAAGCCAAATGGCCCTTTGGCCGTCATACGC-TTCTAGGT---GTCCGAAGCCCAATTATACGAAAGTAGCTTTA----TTAAAGCCCA-CCTGACCCCACGAAAGCTGAGAAACAAACT-GGGATTAGATA-CCCCACTATGCTCAGCCATAAACCTAGACATCC-AACTACAATTAGACGTCCGCCTGGGTACTACGAGCA-TTAGCTTGAAACCCAAAGGACCTGACGGTGCCTTAGACCCCCCTAGAGGAGCCTGTTCTAGAACCGATAACCCCCGTTAAACCTCACCACTTCTA---GCCATCCCAGCCTATATACCGCCGTCGTCAGCTTACCCTGTGAAGGCAATAAAAGTAAGCAAAATGGGCACAACCC---AG-AACGTCAGGTCGAG-GTGTAGCGTACGAAGTGGGAAGAAATGGGCTACATTTTCTAT--CACAGAACACT--ACGAA-CATGCAACATGAAA--TAGTGC--TTGAA-GGAGGATTTAGTAGTAAAAAGGAAGCAGAGTGTCCTTTTGAACTCGGCTCTGAGGCGCGTACACACCGCCCGTCACTCTCCCCTGTCAAAAC--GCAACAAAGATACATAACACTAAAGCA-CTGACAAGGGGAGGCAAGTCGTAACATGGTAAGTGTACCGGAAGGTGCACTTGGATTAAACCCAGGGCGTGGCTGAGTCAGTCAAGCATCTCAC-TTACACCGAGAAGACATCCATGCAAATTGG-ATCACCCTGA-GCCAAACAGCTAG-----CTTAACCACTAATA-TAACCCAACAATGTTAATA-ACAAAACATGACCTAACACC-A--TAAACTAAACCATTTTTTTACCTGAGTATGGGAGACAGAAAAGGTTCAACCT--AAAGCGATAGAAAAAGTACCGCAAGGGAAAGCTGAAAGAGAAATGAAACAACCCATATAAGCACTAAAAAACAAAGACTAAACCTTGTACCTTTTGCATCATGATTTAGCCAGCA-CCCTCAAGCAAAGAGACCTTTAGTTTGAAACCCCGAAACCAGGTGAGCTACCCCGAGACAGCCTATTAAAATTTAGGGCTAACCCGTCTCTGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>Gobio_gobio_12S Alignment of 3 sequences: denovo20, denovo21, AB239596
-------------------------GCTAGCGTAGCTTAATA-CAAAGCATAACACTGAAGATGTTAAGATGGGCCCTAGTAA-GCTCCGCATGCACAAAGGCATGGTCCTGACCTTATTATCAGCTCTAACCCAACTTACACATGCRAGTCTCCGCAGTCCCGTGAATATGCCCT--CAATCCCCTG-C--CCGGGGACGAGGAGCGGGCATCAGGCAC----AAR--C-----TTTAGCCCAAGACGCCCAGCCAAGCCACACCCCCAAGGGAATTCAGCAGTGATAGACATTAAGCCATAAGTGAAAACTTGACTCAGTCAGGG-TTAAGAGGGCCGGTAAAACTCGTGCCAGCCACCGCGGTTAAACGAG-AGGCCCTAGTTGATWTTATCACGGCGTAAAGGGTGGTTAAGG-AANNNNGACR-AAACAA---TAAAGCCGAATGGCCCTTTGGCCGTCATACGC-TTCTAGGT---GTCCGAAGCCCARTARTACGAAAGTAGCTTTA----ATAAAAYCCA-CCTGACCCCACGAAAGCTAAGAAACAAACT-GGGATTAGATA-CCCCACTATGCTCAGCTATAAACCTAGACGTCC-ACCTACAATTAGACGTCCGCCCGGGTACTACGAGCA-TCAGCTTGAAACCCAAAGGACCTGACGGTGCCTTAGACCCCCCTAGAGGAGCCTGTTCTAGAACCGATAACCCCCGTTAAACCTCACCACTTCTA---GCCACCCCAGCCTATATACCGCCGTCGCCAGCTTACCCTGTGAAGGCAATAAAAGTAAGCAAAATGGGCACARCCC---AG-AACGTCAGGTCGAG-GTGTAGCGTACGAAGTGGGAAGAAATGGGCTACATTTTCTACT-TAYAGAACACT--ACGAA-CATGCAACATGAAA--TAGTGC--TTGAA-GGAGGATTTAGTAGTAAAAAGGAAGCAGAGTGTCCTTTTGAACCCGGCTCTAAGGCGCGTACACACCGCCCGTCACTCTCCCCTGTCAAYAC--GCAATAAAGATTCATAACAMYAAAGCA-CTGACAAGGGGAGGCAAGTCGTAACATGGTAAGTGTACCGGAAGGTGCACTTGGATTAAACCCAGGGCGTGGCTGAGTYAGTTAAGCATCTCAC-TTACACCGAGAAGACATCCATGCAAATTGG-ATCACCCTGA-GCCAARCAGCTAG-----CCTAATTACTGATA-TAACACAACAATGTTTATA-ACAAAACACAACATAACACT-A--AAAACTAAACCATTTTTTTACCTGAGTATGGGAGACAGAAAAGGTTAAACCA--AGCGCAATAGAAAAAGTACCGCAAGGGAAAGCTGAAAGAGAAATGAAATAAACCATATAAGCACCAAAAAACAAAGACTAAACCTTGTACCTTTTGCATCATGATTTAGCCAGAA-CCCTCAAGCAAAGAGACCTTTAGTTTGAAACCCCGAAACCAGGTGAGCTACCCCGAGACAGCCTATA-TAACTTAGGGCTAAC-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>Phoxinus_phoxinus_12S Alignment of 3 sequences: AB671170, AP009309, KC992395
-------------------------GCTAGYGTAGCTTAATS-CAAAGCATAACACTGAAGATGTTAAGATGGGCCCTGAGAA-GCTCCGCATGCACAAAGGCATGGTCCCGACCTTATTATYAGCTCTAACTCAACTTACACATGCAAGTCTCCGCRAYCCTGTGAGTATGCCCT--TAATCCCCTG-C--CCGGGGACGAGGAGCGGGTATCAGGCAC----AAR-NT-----TTTTGCCCAAGACGCCTGGCCAAGCCACACCCCCAAGGGAATTCAGCAGTGATARATATTGAGCCATAAGTGAAARCTTGACTCAGTCAGAG-YTAARAGGGCCGGTAAAACTCGTGCCAGCCACCGCGGTTAAACGAG-AGGCCCTAGTTRATGATTG-MCGGCGTAAAGGGTGGTTAGGG-GGTG----TA-ATRTAA---TAAAGCCGAATGGCCCYTTGGCTGTCATACGC-TTCTRGGT---GYCCGAAGYCCAR-YATACGAAAGTAGCTTTA----ARARAGTCCA-CCTGACGCCACGAAAGCTGAGAAACAAACT-GGGATTAGATA-CCCCACTATGCTCAGTCATAAACCTAGACGTCC-TACTACAGCTAGACGTCCGCCCGGGTACTACGAGCGCTTGGCTTGAAACCCRAAGGACCTGACGGTGCCTCAGACCCCCCTAGAGGAGCCTGTTCTAGAACCGATAACCCCCGTTAAACCTCACCACTTCTA---GCCACCCCAGCCTATATACCGCCGTCGTCAGCTTACCCTGTGAAGGTAATAAAAGTAAGCARAATGGGCAYARCCC---AG-AACGTCAGGTCGAG-GTGTAGCGCACGRAGCGGGAAGAAATGGGCTACATTTTCTAT--ARTAGAATATT--ACGAA-TATGCAACATGAAA--TAGTGC--TTGAA-GGAGGATTTAGTAGTAAAAAGGAAGCAGAGTGTCCTTTTGAACCCGGCTCTGAGGCGCGTACACACCGCCCGTCACCCTCTCCTGTC-RAAT--GCAATRAARATACCTAATAYHAAMGCG-CTGACAAGGGGAGGCAAGTCGTAACATGGTAAGTGTACCGGAAGGTGCACTTGGATTAAATTCAGGRCGTGGCTGAGYTAGTTAAGCATCTCAC-TTACACCGAGAAGACAYCCATGCAAATTGG-RTCRCCCTGA-GCCAACCAGCTAG-----CTTAATTACTTATA-TAATTYAACAATGTTCTTA-ACAAAACATAAMYYAACAAT-A--CAAACTAAACCATTTTWTTACCTRAGTATGGGAGACAGAAAAGGTTCAACRC--AAAGCRATAGAAAAAGTACCGCAAGGGAAAGCTGAAARAGAKATGAAACAGCYCATRTAAGCRCCRARAAACAAAGACTARACCTTGTACCTTTTGCATCATGATTTAGCCAGCA-CCCTCAAGCRAAGAGCCCTTTAGTTT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>Pseudorasbora_parva_12S Alignment of 3 sequences: denovo23, denovo24, JF802126
-------------------------GCTAGCGTAGCTTAATA-GAAAGCATAACACTGAAGATGTTAAGACGGACCCTAGAAA-GTTCCGCATGCACAAAGGCATGGTNCCGACCTTATTATCAGCTGTAACCCAACTTACACATGCAAGTCTCCGCATCCCTGTGAATATGCCCT--MAATCCCCTG-C--CCGGGGATAAGGAGCGGGCATCAGGCAC----AAA--A-----TTTAGCCCAAGACGCCTAGCCAAGCCACACCCCCAAGGGAATTCAGCAGTGATAAACATTAAGCCATAAGTGAAAACTTGACTCAGTCAGGG-YTAAGAGGGCCGGTAAAACTCGTGCCAGCCACCGCGGTTAAACGAG-AGGCCCTAGTTGATAATATTACGGCGTAAAGGGTGGTTAAGG-AAAA----TA-AATTAA---TAAAGCCAAATGGCCCTTTGGCCGTCATACGC-TCCTAGGT---GTCCGAGGCCCGATTTTACGAAAGTAGCTTTA----ACATAATTWA-CCTGACCCCACGAAAGCTGAGAAACAAACT-GGGATTAGATA-CCCCACTATGCTCAGCCATAAACCTAGACGCCC-TAGTACAA-TAGGCGTCCGCCAGGGTACTACGAGCA-TCAGCTTGAAACCCAAAGGACCTGACGGTGCCTTAGACCCCCCTAGAGGAGCCTGTTCTAGAACCGATAACCCCCGTTAAACCTCACCACTTCTA---GCCATCCCAGCCTATATACCGCCGTCGCCAGCTTACCCTGTGAAGGCACCAAAAGTAAGCAAAATGGGCACAACCC---AG-AACGTCAGGTCGAG-GTGTAGCGTACGAAGTGGGAAGAAATGGGCTACATTTTCTAT--TATAGAATATT--ACGAATCATGCAACATGAAA--TAGTGT--TTGAA-GGAGGATTTAGTAGTAAAAAGGAAGCAGAGTGTCCTTTTGAACCCGGCTCTAAGGCGCGTACACACCGCCCGTCACTCTCCCCTGTCAAAAC--GCAGTAACGCTACRTAACACAAAAGCA-CTGACAAGGGGAGGCAAGTCGTAACATGGTAAGTGTACCGGAAGGTGCACTTGGATTAAACTCAGGGCGTGGCTGAGTCAGTCAAGCATCTCAC-TTACACCGAGAAGACATCCATGCAAATTGG-ATCACCCTGA-GCTAAATAGCTAG-----CTTAACCCTCAATA-TAACTTAACARTRTTTATA-ACAAAACATAAAATTAATAC-C--AAAACTAAACCATTTTTTTACCTAAGTATGGGAGACAGAAAAGGTTCCACCC--TAAGCGATAGAAAAAGTACCGCAAGGGAAAGCTGAAAGAGAAATGAAATAATTYATATAAGCA-CAAAAAACAAAGATTAAATCTTGTACCTTTTGCATCATGATTTAGCCAGTA-TCCTCAAGCAAAGAGACCTTTAGTTTGAAACCCCGAAACCAGGTGAGCTACCCCGAGACAGCCTATTAAAATAGGGCTA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>Barbus_barbus_12S Alignment of 3 sequences: denovo16, Y12666, AB238965
-------------------------GCTAGCGTAGCTTAATA-TAAAGCATAGCACTGAAGATGCTAAGATGGGTCCTAGAAA-ACTCCGCATGCATAAAGGCATGGTCCCGACCTTACTATCAGCTTTAACACAACTTACACATGCRAGTCTCCGCAACCCAGTGAGTATGCCCT--TAACCCCCT--C--CCGGGGGTAAGGAGCGGACATCAGGCAC----AAA--C----ATT-AGCCCAAGACGCCCAGCCTAGCCACACCCCCAAGGGAATTCAGCAGTGATAGACATTAAGCCATAAGTGAAAACTTGACTCAGTTAGTG-TTAAGAGGGCCGGTAAAACTCGTGCCAGCCACCGCGGTTAGACGAG-AGGCCCTAGTTGATATTATAACGGCGTAAAGGGTGGTTAGGG-ATAA-----A-TAATAA---TAAAGCCAAATGGCCCCTTGGCCGTCATACGC-TTCTAGGT---GTCCGAGGCCCTA-TATACGAAAGTAGCTTTA----ATTGA-CCCG-CCTGACCCCACGAAAACTGAGAAACAAACT-GGGATTAGATA-CCCCACTATGCTCAGCCGTAAACTTAGACATCC-NAATACAATTAGATGTCCGCCAGGGTACTACGAGCA-CCAGCTTAAAACCCAAAGGACCTGACGGTGTCTCAGACCCCCCTAGAGGAGCCTGTTCTAGAACCGATAACCCCCGTTTAACCTCACCACTTCTA---GCCACCCCAGCCTATATACCGCCGTCGTCAGCTTACCCTGTGAAGGAAACAAAAGTAAGCAAAATGGGCACAACCC---AG-AACGTCAGGTCGAG-GTGTAGCGCATGAAATGGAAAGAAATGGGCTACATTTTCTAT--TACAGAATATT--ACGAA-CGTGCACCATGAAA--TAGTGC--TTGAA-GGAGGATTTAGTAGTAAAAGGGAAATAGAGTGTCCCTTTGAACCCGGCYYTGAGACGSGTACACACCGCCCGTCACTCTCCCC-GTCAAAAT--GCACC-AAAATACCTAATGCAACAGCA-CTGACAAGGGGAGGCAAGTCGTAACATGGTAAGTGTACCGGAAGGTGCACTTGGATCAAACCCAGGGCGTGGCTGAGTTAGTTAAGCATCTCAC-TTACACCGAGAAGACATCCATGCAAGTTGG-ATCACCCTGA-GCCGAACAGCTAG-----CTTAATCACCAA-A-TAAATGAACAATATAGATA-AAATTGAGTAAACTAAATAC-A--AAAACTAAATCATTCTTTTGCCTGAGTATGGGAGACAGAAAGGGCTACGCC---GAAGCGATAGAAACAGTACCGCAAGGGAAAGCTGAAAGAGAAATGAAAAAACCCATATAAGCACAAAAAAGCAAAGATTAAATCTTGTACCTTTTGCATCATGATTTAGCCAGTA-CACCCAAGCAAAGAGACCTTTAGTTTGAAACCCCGAAACCAGGTGAGCTACCCCGAGACAGCCTAT------TAAGGGCCAACCCGTCTCTGTGGC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>Barbatula_barbatula_12S Alignment of 4 sequences: Barbatula, denovo13, denovo14, denovo15
----------------------------------------------------------------------------------------------------------GTCCTGAGTTTACTATCATCTTTAACACAATTTACACATGCGAGTATCCGCGCCCCTGTGAGAATGCCCT--TAATCCCCCG-C--CCGGGGACGAGGAGCAGGTATCAGGCAC----AACC-------CTTAGCCCAAGACACCTTGCCAAGCCACACCCCCAAGGGAATTCAGCAGTGATAGATATTAAGCCATAAGTGAAAACTTGACTTAGTTARTG-TTAAGAGGGCCGGTAAAACTCGTGCCAGCCACCGCGGTTATACGAG-AGGCCCAAGTTGATAG--GCACGGCGTAAAGGGTGGTTAAGG-AAAA-------CATAAA---TAAAGCCAAAGGGCCTCCCGGCCGTCATACGC-TCCCGAGT---GTCCGAAGCCCCC--AAACGAAAGTAGCTTTA----ATACCGCCCA-CCTGACCCCACGAAAACTGAGAAACAAACT-RGGATTAGATA-CCCCACTATGCTCAGCCGTAAACCTAGACGTTA-TACCACTA-TAAACGTCCGCCCGGGTACTACGAGCG-TTAGCTTAAAACCCAAAGGACTTGGCGGTGCCTTAGACCCCCCTAGAGGAGCCTGTCCTAGAACCGATARTCCCCGTTAAACCTCACCACTTCTA---GCCAACCCCGCCTATATACCGCCGTCGTCAGCTTACCCTGTGAAGGA-CTAACAGTAAGCTAAGTGGATATAATCC---AA-AACGTCAGGTCGAG-GTGTAGCGCACGAAGTGGGAAGAGATGGGCTACATTTTCTAT--AATAGAACATT-CACGAA--CAGTACCCTGAAA--AACAAC--TCGAA-GGAGGATTTAGTAGTAAAAAGGAAAAAGAGTGTCCTTTTGAACCCGGCTCTGAGGCGCGTACACACCGCCCGTCACTCTCTCCTGTCACACA--GCAATACATGTAATTAACACCAAAGCA-TAGACAAGGGGAGGCAAGTCGTAACATGGTAAGTGTACCGGAAGGTGCACTTGGATCAAACCCAGGGTGTGGCTGAGGCAGTTAAGCATCTCCC-TTACACCGAGAAGACACCCATGCAAATTGG-GTCGCCCTGA-GCCAAACAGCTAG-----CTTAACCACCAGAATTAACTCATCAACATAGATA-ATACAAAATCAACTAGTCCAA---TAAACTAAACCATTTTTCCACCTTAGTACGGGAGACGGAAAAGGTAACTT----TAAGCAATAGAGAAAGTACCGCAAGGGAAGGCTGAAAGAGTAATGAAACAACCCATATAAGCACAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>Cobitis_taenia_12S Alignment of 3 sequences: AJ001795, AJ001797, AJ001798
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TA-CCCCACTATGTTCAGCCATAAACTTAGACGTTR-TTRTACAA-TAAACGTCCGCCAGGGTACTACGAGCA-TTAGCTTAAAACCCAAAGGACTTGGCGGTGCCTCAGACCCCCCTAGAGGAGCCTGTTCTAGAACCGATAACCCCCGTTAAACCTCACCACTTCTG---GTCATCCCCGCCTATATACCGCCGTCGTCAGCTTACCCTGTGAAGGA-CTRATARTAAGCAAAATGAATADAAYCC---AA-AACGTCAGGTCGAG-GTGTAGCGAACGAAGTGGGAAGAAATGGGCTACATTTTYNTTA-ATAAGAATAAT--ACGAA--YARCACTATGAAAACTAGTGC--TCGAA-GGAGGATTTAGYAGTAAAAAGGAAATAGAGTGTCCTTTTGAAMCCGGCTCTGAG------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>Rhodeus_sericeus_12S Alignment of 2 sequences: Y12671, KM052222
---------------------AAATGCTAGCGTAGCTT-ACC-TAAAGCATAACACTGAAGATGTTAAGACGGGCCCTAGAAA-GCTCCGCATGCATAAAGGCATGGTCCTGACCTTACTGTCAGCTCTAGCCCAACTTACACATGCAAGTATCTGCACCCCCGTGAGTACGCCCT--CAATCCCCCG-C--CCGGAGATTAGGAGCAGGCATCAGGCACACTTAAA--C-----CCTAGCCCAAGACGCCCAGCCAAGCCACACCCCCAAGGGAATTCAGCAGTGATAAACATTAAGCCATGAGTGCAAGCTCGACTTAGTCAGGG-CTAATAGGGCCGGTAAAACTCGTGCCAGCCACCGCGGTTAAACGAGTAGGCCCCAGTTGACAGTACTGCGGCGTAAAGGGTGGTTAAAG-CCTG----CA-ACTTAA---TAAAGCTAAATAGTCCCCCGGCCGTCATACGC-TTCTAGGC---GCTAGAAACCCAA-TATACGAAAGTAGCTTTA----ATATCA-CCG-CCTGACCCCACGAAAGCTGAGGAACAAACT-GGGATTAGATA-CCCCACTATGCTCAGCCATMAWCCCAGACATTT-TTATACAACACATGTNCCGCCAGGGTACTACGAGCA-TTAGCTTAAAACCCAAAGGACCTGACGGTGCCTCAGACCCCCCTAGAGGAGCCTGTTCTAGAACCGATAACCCCCGTTAAACCTCACCACTTCTG---GTCATCCCAGCCTATATACCGCCGTCGCCAGCTTACCCTGTGAAGGTAATAAAAGTAAGCAAAATGGGCACAACCC---AG-AACGTCAGGTCGAG-GTGTAGCGCACGAAGTGGGAAGAAATGGGCTACATTTTCTTA--TRCAGAACACT--ACGGA-TGCGCAACATGAAA--TAGTGC--TTGAA-GGAGGATTTAGTAGTAAAAAGGAAAAAGAGTGTCCTTTTGAACCCGGCTCTGAGACGCGTACACACCGCCCGTCACTCTCCCCTGTCAAAAT--GCAATTAATATACATAATTCCACAGCA-CTGACAAGGGGAGGCAAGTCGTAACATGGTAAGTGTACCGGAAGGTGCACTTGGATAAACCCCGGGACGTGGCTGAGTAAGTTAAGCATCTCAC-TTACACCGAGAAAACATCTATGCAAGTTAG-GTCGTCCCGA-GCCAAACAGCTAG-----CTCTAACACAAACA------ACTCACAATATAGT-AATTAATATTATTTTAATAA-T--TAAACTAAACCATTCTTTTACCTAAGTATGGGAGACAGAAAGGGTAATAAACCTGAAGCCATAGAAAAAGTACCGCAAGGGAAAGCTGAAAGAGAAATGAAATAACCCATTAAAGCAATAAAAAACAAAGACTAAACCTTGTACCTTTTGCATCATGATTTAGCAAGAA-CCCCCAAGCAAAGAGCCCTTTAGTTTGGAGCCCCGAAACCAAGTGAGCTACCCCGAGACAGCCTAC-ACAAGGTAGGGCAAACCCGTCTCTGTGGCAAAAGAGTGGGAAGAACTCCGGGTAGAAGTGACAGACCTACCGAACTTGGTGATAGCTGGTTGCTTAAGAAATGGATAGAAGTTCAGCCCCGTGCTCCTCGAGCCAAAGAGAGTCTTTAAAATGACCAAGAGTAAA------------------------------------------------------------------------------------
>Ameiurus_melas_12S Alignment of 3 sequences: JN015532, DQ421854, DQ421855
------------------------------------------------------------------------------------------------CAAAGGCTTGGTCCTGACTTTACTATCAGCTTTAACCCAATTTATACATGCAAGTCTCCGCACCCCTGTGAGAATGCCCT--CAATCCCCTG-C--CCGGGGACGAGGAGCAGGCATCAGGCAC---ATCCTCTACAGATCGCGCCCAAGACGCCTTGCTACGCCACTCCCCCAAGGGAACTCAGCAGTAATAGACATTAAGCCATAAGTGCAAACTTGACTTAGTTAGGG-TTATTAGGGCCGGTAAAATTCGTGCCAGCCACCGCGGTTATACGAA-AGACCCTAGTTGCTAG--CCACGGCGTAAAGGGTGGTTAAGG-ACAA------CAACAAA---TAAAGCTAAAGATCCCCTAAGCCGTCATACGCATTCCGGGG---GCACGAAGCCCTA--ACACGAAAGTAGCTTTAAAAAATATA------CCTGACCCCACGAAAGCTAAGAAACAAACT-GGGATTAGATA-CCCCASTATGCTTAGCCTTAAACCCAGATGTAT-CCTTACA--CACACATCCGCCCGGGTACTACGAGCA--TAGCTTAAAACCCAAAGGACTTGGCGGTGTCTCAGACCCACCTAGAGGAGCCTGTTCTATAACCGATAACCCCCGTTAAACCTCACCACTTCTT---GTTAATACCGCCTATATACCGCCGTCGTCAGCTTACCCTGTGAAGGT-CTAACAGTAAGCAAAATGGGCCCGCCCA---AA-AACGTCAGGTCGAG-GTGTAGCGTACGAAGTGGGAAGAAATGGGCTACATTTTCTACA-ACTAGAATACTAAACGAA--CGGCATTATGAAAATTATTGC--CTGAA-GGTGGATTTAGTAGYAAAAAGCAAACAGAGTGTCCTTTTGAATTAGGCTCTGAGACGCGCACACACCGCCCGTCACTCTCCCCTACACATAA--CTATTCCACATATATAATACACTCCACATCAATACGGGGAGGCAAGTCGTAACATGGTAAGTGTACCGGAAGGTGCACTTGGAACAA--T--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>Ameiurus_nebulosus_12S Alignment of 3 sequences: AY430252, denovo0, JX899750
----------------------------------------------------------------------------------------------------GGCTTGGTCCTGACTTTACTATCAGCTTTAACCCAATTTATACATGCAAGTCTCCGCACCCCTGTGAGAATGCCCT--CAATCCCCTG-C--CCGGGGACGAGGAGCAGGCATCAGGCAC---ATCCTCTACAGATCGCGCCCAAGACGCCTTGCTACGCCACTCCCCCAAGGGAACTCAGCAGTAATAGACATTAAGCCATAAGTGTAAACTTGACTTAGTTAGGG-TTATTAGGGCCGGTAAAATTCGTGCCAGCCACCGCGGTTATACGAA-AGGCCCTAGTTGCTAG--CCACGGCGTAAAGGGTGGTTAAGG-ACAA------CAACAAA---TAAAGCTAAAGATCCCCTAAGCCGTCATACGCATTCCGGGG---GCACGAAGCCCTA--ACACGAAAGTAGCTTTAAAAAATATA------CCTGACCCCACGAAAGCTAAGAAACAAACT-GGGATTAGATA-CCCCACTATGCTTAGCCTTAAACCCAGATGTAT-TCTTACA--CACACATCCGCCCGGGTACTACGAGCA--TRGCTTAAAACCCAAAGGACTTGGCGGTGTCTCAGACCCACCTAGAGGAGCCTGTTCTATAACCGATAACCCCCGTTAAACCTCACCACTTCTT---GTTAATACCGCCTATATACCGCCGTCGTCAGCTTACCCTGTGAAGGT-CTAACAGTAAGCAAAATGGGCCCGCCCA---AA-AACGTCAGGTCGAG-GTGTAGCGTACGAAGTGGGAAGAAATGGGCTACATTTTCTACA-ACTAGAATATTAAACGAA--TGGCATTATGAAAATTATTGC--CTGAA-GGTGGATTTAGTAGTAAAAAGCRAACAGAGTGTCYTTTTGAATTAGGCTCTGAGACGCGCACACACCGCCCGTCACTCTCCCCTACACATAA--CTATTYCACATATATAATACACTCCACATCAATACGGGGAGGCAAGTCGTAACATGGTAAGTGTACCGGAAGGTGCACTTGGAACAA--TCAGGACGTGGCTGAGATAGCCAAGCATCTCCC-TTACACCGAGAAGACATCCATGCAAATTGG-ATCGCCCTGA-GCCAAAAAGCTAG-----CTTAACCCCCAGAATACCTAAAACAACATTAAAATACTCCAAAAAACCACAATATCC--CAAATTAAAACATTCTACCGCCCTAGTACGTGTGACAGAAAAGGCAATAAT---AAAGCAATAAATAAAGTACCGCAAGGGAACGCTGAAAGAGAAATGAAATAGATCATTAAAGCACAATAAAGCAGAGATTAAACCTCGTACCTTTTGCATCATGATTTAGCCAGT--CCTCCGAGCAAAGCGCACTTTAGTTCTAGACCCCGAAACTAAGTGAGCTACCCCGAGACAGCCTAT---AAATTAGGGCCAACCCGTCTCTGTGGCAAAAGAGTGGGAAGATCTCCGGGTAGAGGTGACAAGCCTACCGAACTTAGTTATAGCTGGTTGCCTAGGAAGTGAATAGAAGTTCAGCCTCGTACCCCTCACCTCACCAACACCTTTATACTACACGAGCCCGAGAGACCTACGAGAGTTAGTCAAAGGGGGTACAGCCCCTTTGATGCAGGACACAACCTCATCAGGAGGTTAAAGATTATACTAAACA
>Silurus_glanis_12S Silurus glanis complete mitochondrial genome
-------------------------GCTAGTGTAGCTTAAAT-CAAAGCATAACACTGAAGATGTTAAGACGAACCCTAGAAACGTTCCACGGGCATAAAGGCTTGGTCCTGACTTTACTATTAGCTTTAACCTAATTTATACATGCAAGTGTCCGCACCCCTGTGAGAATGCCCT--CAATCCCCCG-C--CCGGGGACGAGGAGCAGGCATCAGGCGC----GCCCCC------GCAGCCCAAGACGCCTTGCTACGCCACACCCCCAAGGGATTTCAGCAGTAATAAACATTAAGCCATAAGTGAAAACTTGACTTAGTTAAGGTCATACAGGGTCGGTAAAATTCGTGCCAGCCACCGCGGTTATACGAA-AGACCCTAGTTAATAG--CCACGGCGTAAAGGGTGGTTAAGG-AATA------TAACAAA---TAAAGCTAAAGACCCTTTAAGCCGTTATACGCACTCCGAGG---ACACGAAGCCCAA--ACACGAAAGTAGCTTTAAACCCCT--------CCTGACTCCACTAAAGCTAAGAAACAAACTGGGGATTAGATA-CCCCACTATGCTTAGCCATAAACCCAGATGTGC-TTTTACAA---CACATTCGCCAGGGTACTACGAGCA--CAGCTTAAAACCCAAAGGACTTGGCGGTGTCTCAGACCCACCTAGAGGAGCCTGTTCTAGAACCGATAACCCCCGTTAAGCCTCACCACTTCTT---GTTTTCCCCGCCTATATACCGCCGTCGTCAGCTTACCCTGTGAAGGC-CTAGCAGTAAGCAAAATGGATACATCCA---AA-AACGTCAGGTCGAG-GTGTAGCGTACGAAGTGGGAAGAAATGGGCTACATTTTCTAAATAACAGAATATT-TACGGA--CGGCACCTTGAAAGTAAGTGC--CCGAA-GGTGGATTTAGTAGTAAAAAGCAAATAGAGAGTCCTTTTGAATTAGGCTCTGAGACGCGCACACACCGCCCGTCACTCTCCCCTCCAATAAAAAATTTTATACATACATAATAACTCAACTACAAACACGGGGAGGCAAGTCGTAACATGGTAAGTGTACCGGAAGGTGCACTTGGAACAA--TCAGAGCGTGGCTGAGATAGTTAAGCATCTCCC-TTACACCGAGAAGACATCCATGCAAGTTGG-ATCGCCCTGA-GCTAAACAGCTAGCTTAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>Coregonus_lavaretus_12S Alignment of 6 sequences: JQ661382, JQ661474, JQ661479, JQ661480, JQ661446, JQ661390
-------------------------GCTGGCGTAGCTT-AAC-TAAAGCATAACACTGAAGCTGTTAAGATGGACCCTAGAAA-GTCCCGCAGGCACAAAGGCTTGGTCCTGACTTTATTATCAGCTTTAACTGAACTTACACATGCAAGTCTCCGCACTCCTGTGAGGATGCCCT--TAATCCCCTG-C--CCGGGGACGAGGAGCTGGCATCAGGCAC----GCCCCG------GCAGCCCAAGACGCCTTGCTAAGCCACACCCCCAAGGAAACTCAGCAGTGATAGATATTAAGCTATAAGCGAAAGCTTGACTTAGTTAAGG-TTAAGAGGGCCGGTAAAACTCGTGCCAGCCACCGCGGTTATACGAG-AGGCCCTAGTTGATAAT-CACCGGCGTAAAGAGTGGTTA-GG-AATT-----ATATTTAA---TAAAGCCGAACACCCCCTTGGCTGTCATACGCA-CCTGGGG---GCACGAAGCCCCA--CTGCGAAAGCAGCTTTAATCACCA--------CCTGAACCCACGACAGCTATGATACAAACT-GGGATTAGATA-CCCCACTATGCCTAGCCGTAAACTTTGATGGAA-ACATACAA-CTAACATCCGCCAGGGAACTACAAGCG-CCAGCTTAAAACCCAAAGGACTTGGCGGTGCCTCAGACCCACCTAGAGGAGCCTGTTCTAGAACCGATAACCCCCGTTCAACCTCACCACCTCTT---GTTTTCCCCGCCTATATACCACCGTCGTCAGCTTACCCTGTGAAGGA-TTTATAGTAAGCAAAATGGGCATGACCC---AA-AACGTCAGGTCGAG-GTGTAGCGCATGGGGTGGGAAGAAATGGGCTACATTCTCTAA--ATTAGAGCATT--ACGAA--CCACGCTGTGAAA-CCAGCGT--CCGAA-GGTGGATTTAGCAGTAAACAGAAAGCAGAGAGTTCTCTTGAAACTGGCTCTGAGGCGCGCACACACCGCCCGTCACTCTCCCCAAGTTCAAT---CTACCCTTCTAACTAAGAAGTTAACC-GAACAAAGGGGAGGCAAGTCGTAACATGGTAAGTGTACCGGAAGGTGCACTTGGAATAA--CCAGAGTGTAGCTAAGACAGAAGAGCACCTCCC-TTACACCGAGAAGACATCCGTGCAAATCGG-GTCACCCTGA-GCTGACTAGCTAG-----CCCACACATTTGGTCTAACACCACAACATATATA-MCCCCACAAAACTTAGAATTAA--GTCAACAAACCATTTTTCCCCCTTAGTATGGGCGACAGAAAAGGGAAT-AAT--TGAGCAACAGAGAAAGTACCGCAAGGGAAAGCTGAAAGAGAACTGAAACAACCCATTTAAGCCTAGAAAAGCAGAGATTAAATCTCGTACCTTTTGCATCATGATTTAGCCAGCA-AACCCGAGCAAAGAGAACTTTAGTTCAGGCCCCCGAAACTAGACGAGCTACTCCGGGACAGCCTAT-----TATAGGGCCAACCCGTCTCTGTGGCAAAAGAGTGGGAAGAGCCCCGAGTAGAGGTGATA------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>Coregonus_oxyrinchus_12S Coregonus oxyrinchus isolate V13 mitochondrion, complete genome
-------------------------GCTGGCGTAGCTT-AAC-TAAAGCATAACACTGAAGCTGTTAAGATGGACCCTAGAAA-GTCCCGCAGGCACAAAGGCTTGGTCCTGACTTTATTATCAGCTTTAACTGAACTTACACATGCAAGTCTCCGCACTCCTGTGAGGATGCCCT--TAATCCCCTG-C--CCGGGGACGAGGAGCTGGCATCAGGCAC----GCCCCG------GCAGCCCAAGACGCCTTGCTAAGCCACACCCCCAAGGAAACTCAGCAGTGATAGATATTAAGCTATAAGCGAAAGCTTGACTTAGTTAAGG-TTAAGAGGGCCGGTAAAACTCGTGCCAGCCACCGCGGTTATACGAG-AGGCCCTAGTTGATAAT-CACCGGCGTAAAGAGTGGTTA-GG-AATT-----ATATTTAA---TAAAGCCGAACACCCCCTTGGCTGTCATACGCA-CCTGGGG---GCACGAAGCCCCA--CTGCGAAAGCAGCTTTAATCACCA--------CCTGAACCCACGACAGCTATGATACAAACT-GGGATTAGATA-CCCCACTATGCCTAGCCGTAAACTTTGATGGAA-ATATACAA-CTAACATCCGCCAGGGAACTACAAGCG-CCAGCTTAAAACCCAAAGGACTTGGCGGTGCCTCAGACCCACCTAGAGGAGCCTGTTCTAGAACCGATAACCCCCGTTCAACCTCACCACCTCTT---GTTTTCCCCGCCTATATACCACCGTCGTCAGCTTACCCTGTGAAGGA-TTTATAGTAAGCAAAATGGGCATGACCC---AA-AACGTCAGGTCGAG-GTGTAGCGCATGGGGTGGGAAGAAATGGGCTACATTCTCTAA--ATTAGAGCATT--ACGAA--CCACGCTGTGAAA-CCAGCGT--CCGAA-GGTGGATTTAGCAGTAAACAGAAAGCAGAGAGTTCTCTTGAAACTGGCTCTGAGGCGCGCACACACCGCCCGTCACTCTCCCCAAGTTCAAT---CTACCCTTCTAACTAAGAAGTTAACC-GAACAAAGGGGAGGCAAGTCGTAACATGGTAAGTGTACCGGAAGGTGCACTTGGAATAA--CCAGAGTGTAGCTAAGACAGAAGAGCACCTCCC-TTACACCGAGAAGACATCCGTGCAAATCGG-GTCACCC---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>Thymallus_thymallus_12S Alignment of 4 sequences: AY430255, GU233803, FJ620118, FJ853655
-----------------------------GCGTAGCTT-AAC-TAAAGCATAACACTGAAGCTGTTAAGATGGACCCTAGAAA-GTCCCACGAGCACAAAGGCTTGGTCCTGACTTTACTATCAGCTTTAACTGAACTTACACATGCAAGTCTCCGCACTCCTGTGAGGATGCCCT--TAATCCCCTG-C--CCGGGGACGAGGAGCCGGCATCAGGCAC----GCCTCG------GCAGCCCAAGACGCCTTGCTAAGCCACACCCCCAAGGAAACTCAGCAGTGATAGATATTAAGCCATAAGCGAAAGCTTGACTTAGTTAAGG-TTAAGAGGGCCGGTAAAACTCGTGCCAGCCACCGCGGTTATACGAG-AGGCCCAAGTTGACAAT-TACCGGCGTAAAGAGTGGTTATGG-AATA-----ATATTTRA---TAAAGCCGAACACCCCCTCAGCTGTCATACGCA-CCTGGGG---GCACGAAGCTCCA--CTGCGAAAGCAGCTTTAAT--ACC--------CCTGAACCCACGACAGCTATGAAACAAACT-GGGATTAGATA-CCCCACTATGCCTAGCCGTAAACTTTGATGAAA-ATATACAA-CTGACATCCGCCAGGGAACTACAAGCG-CCRGCTTAAAACCCAAAGGACTTGGCGGTGCCTCAGACCCACCTAGAGGAGCCTGTTCTAGAACCGATAACCCCCGTTCAACCTCACCACCTCTT---GTTTTCCCCGCCTATATACCACCGTCGTCAGCTTACCCTGTGAAGGT-TATATAGTAAGCAAAATGGGTATAACCC---AA-AACGTCAGGTCGAG-GTGTAGCGCATGGGGTGGGAAGAAATGGGCTACATTCTCTAA--AATAGAGCATT--ACGAA--CCACGCTGTGAAA-CCAGCGT--YCGAA-GGTGGATTTAGCAGTAAACAGAAAGCAGAGAGTTCTCTTGAAACTGGCTCTGAGGCGCGCACACACCGCCCGTCACTCTCCCCAAGTTCAAT---ACACCCTTCTAACTAAGAAGTTAACC-GAACAAAGGGGAGGCAAGTCGTAACATGGTAAGTGTACCGGAAGGTGCGCTTGGAATAA--CCAGAGTGTAGCTAAGATAGAAAAGCACCTCCC-TTACACCGAGAAGACATCCGTGCAAATCGG-GTCACCCTGA-GCTGACTAGCTAG-----CCAACACATTTGGTCTAACACCACAACATATATA-CCCCAATAAAACTTAGAATTAA--GTCAACAAACCATTTTTCCCCCTTAGTATGGGCGACAGAAAAGGGAAC--AT--TGAGCAACAGAGAAAGTACCGCAAGGGAAAGCTGAAAGAGAACTGAGACAACCCATTTAAGCCTAGAAAAGCAGAGATTAAATCTCGTACCTTTTGCATCATGATTTAGCCAGCA-AACCCGAGCAAAGAGAACTTTAGTTCTGGCCCCCGAAACTAGACGAGCTACTCCGGGACAGCCTAT-----TATAGGGCCAACCCGTCTCTGTGGCAAAAGAGTGGGACGAGCCCCGAGTAGAGGTGATAAACCTATCGAGCCTAGTTATAGCTGGTTGCTTAGGAAATGAATAGAAGTTCAGCCCCCTGGCTTTCTTAAGACATAAAGGTAAAACTAACCTAGTCCCAGA-------------------------------------------------------------------------------------
>Oncorhynchus_mykiss_12S Alignment of 14 sequences
-------------------------GCTGACGTAGCTT-AAC-TAAAGCATAACACTGAAGCTGTTAAGACGGACCCTAGAAA-GTCCCGCTAGCACAAAGGCTTGGTCCTGACTTTACTATCAGCTCTAACTGAACTTACACATGCAAGTCTCCGCATTCCTGTGAGGATGCCCT--TAATCCCCTG-C--CCGGGGACGAGGAGCCGGCATCAGGCAC----GCCCAG------GCAGCCCACGACGCCTTGCTAAGCCACACCCCCAAGGAAACTCAGCAGTGATAAATATTAAGCCATAAGCGAAAGCTTGACTTAGTTAAGG-TTAAGAGGGCCGGTAAAACTCGTGCCAGCCACCGCGGTTATACGAG-AGGCCCTAGTTGATAAC-TACCGGCGTAAAGAGTGGTTATGG-NAAA-----ATATTTAA---TAAAGCCGAACACCCCCTCAGCCGTCATACGCA-CCTGGGA---GCACGAAGACCTA--CTGCGAAAGCAGCTTTAACT-ATG--------CCTGACCCCACGACAGCTAAGAAACAAACT-GGGATTAGATA-CNCCACTATGCCTAGCCGTAAACCTTGATAGAA-ATATACAA-TTGATATCCGCCAGGGAACTACAAGCG-CCAGCTTAAAACCCAAAGGACTTGGCGGTGCCTCAGACCCACCTAGAGGAGCCTGTTCTAGAACCGATAACCCCCGTTCAACCTCACCACCCCTT---GTTTTACCCGCCTATATACCACCGTCGTCAGCTTACCCTGTGAAGGC-CCCATAGTAAGCAAAATGGGCAAAACCC---AA-AACGTCAGGTCGAG-GTGTAGCGCATGAGGTGGGAAGAAATGGGCTACATTCTCTAA--ATTAGAGCACT--ACGAA--CCACGCTGTGAAA-TCAGCGT--CCGAA-GGTGGATTTAGCAGTAAACAGAAAACAGAGAGTTCTCTTGAAACTGGCTCTGAGGCGCGCACACACCGCCCGTCACTCTCCCCAAGTTCAAC---CTGTCCTTCTAACTAAGAAGTTAACC-GAACAAAGGGGAGGCAAGTCGTAACATGGTAAGTGTACCGGAAGGTGCGCTTGGAATAA--CCAGAGTGTAGCTAAAATAGGAAAGCACCTCCC-TTACACCGAGAAGACATCCGTGCAAATCGG-GTCACCCTGA-GCTGACTAGCTAG-----CCAACATATTTGGTCCAACACCACAACATACATA-CCCCAATAAAACTTAGAATTAA--GTCAACAAACCATTTTTCCACCTTAGTAGGGGCGACCGAAAAGGAGAT-AAT--TGAGCAACAGAAAAAGTACCGCAAGGGAAAGCTGAAAGAGAATTGAAATAACCCATTTAAGCCTAGAGAAGCAGAGATTAAATCTCGTACCTTTTGCATCATGATTTAGCCAGCA-CACCTGAGCAAAGAGAACTTTAGTTTAGGCCCCCGAAACTAGACGAGCTACTCCGGGACAGCCTAT-----TGTAGGGCCAACCCGTCTCTGTGGCAAAAGAGTGGGACGAGCCCCGAGTAGAGGTGATAAACCTATCGAGCCTAGTTATAGCTGGTTGCTTAGGAAATGAATAGAAGTTCAGCCCCCCGGCTTTCTTAGGACCTTAAGGTAAAACTAATATTGTCCCAAAGAAACCAGGAGAGTTAGTCAAAGG-------------------------------------------------------------
>Salmo_salar_12S Alignment of 14 sequences
-------------------------GTTGGCGTAGCTT-AAC-TAAAGCATAACACTGAAGCTGTTAAGATGGACCCTAGAAA-GTCCCGCGAACACAAAGGCTTGGTCCTGACTTTACTATCAGCTCTAACTGAACTTACACATGCAAGTCTCCGCATTCCTGTGAGGATGCCCT--TAATCCCCTG-C--CCGGGGACGAGGAGCCGGCATCAGGCAC----GCCCAA------GCAGCCCAAGACGCCTTGCTAAGCCACACCCCCAAGGAAACCCAGCAGTGATAAATATTAAGCCATAAGCGAAAGCTTGACTTAGTTAAAG-TTAAGAGGGCCGGTAAAACTCGTGCCAGCCACCGCGGTTATACGAG-AGGCCCTAGTTGATAAC-TACCGGCGTAAAGAGTGGTTACGG-AAAA-----ATATTTAA---TAAAGCCGAACACCCCCTCAGCCGTCATACGCA-CCTGGGG---GCACGAAGATCTA--CTACGAAAGCAGCTTTAATT-ATA--------CCTGAACCCACGACAGCTACGACACAAACT-GGGATTAGATA-CCCCACTATGCCTAGCCGTAAACTTTGATGGAA-ACATACAA-CTGACATCCGCCAGGGGACTATAAGCG-CCAGCTTAAAACCCAAAGGACTTGGCGGTGCCTCAGACCCACCTAGAGGAGCCTGTTCTAGAACCGATAACCCCCGTTCAACCTCACCACCTCTT---GTTTTCCCCGCCTATATACCACCGTCGTCAGCTTACCCTGTGAAGGC-CTTATAGTAAGCAAAATGGGCAAAACCC---AA-AACGTCAGGTCGAG-GTGTAGCGCATGGGGTGGGAAGAAATGGGCTACATTCTCTAA--ATTAGAGCACT--ACGAA--CCACGCTGTGAAA-CCAGCGT--CCAAA-GGTGGATTTAGCAGTAAATAGAAAATAGAGAGTTCTCTTGAAACTGGCTCTGAGGCGCGCACACACCGCCCGYCMSTCWCCCCAAGTTCAAT---TAACCCTTCTAACTAAGAAATTAACC-GAACAAAGGGGAGGCAAGTCGTAACATGGTAAGTGTACCGGAAGGTGCAMTTGGAATAA--CCAGAGTGTAGCTAAAATAGGAAAGCACCTCCC-TTACACCGAGAAGACATCCGTGCAAATCGG-GTCACCCTGA-GCTGACTAGCTAG-----CCAACACACTTGGTCTAACACCACAACATACATA-CCCCTATAAAACTTAAAACTAA--GTCAACAAACCATTTTTCCACCTTAGTACGGGCGACGGAAAAGGAAACAATT--TGAGCAACAGAAAAAGTACCGCAANGGAAAGCTGAAAGAGAAATGAAACAACCCATTTAAGCCTAGAAAAGCAGAGATTAAATCTCGTACCTTTTGCATCATGATTTAGCCAGCA-AACCCGAGCAAAGAGAACTTTAGTTCAGGCCCCCGAAACTAGACGAGCTACTCCGGGACAGCCTAT-----TATAGGGCCAACCCGTCTCTGTGGCAAAAGAGTGGGACGAGCCCCGAGTAGAGGTGACAAACCTATCGAGCCTAGTTATAGCTGGTTGCTTAGGAAATGAATAGAAGTTCAGCCCCCTGGCCTTCTTAGGACCTCAAGGTAAAACTAACCTTG--------------------------------------------------------------------------------------------
>Salmo_trutta_12S Alignment of 8 sequences: KC441960, LC011387, GU233801, JN007557, JN007558, EU048341, denovo26, AM910409
-------------------------GTTGGCGTAGCTT-AAC-TAAAGCATAACACTGAAGCTGTTAAGATGGACCCTAGAAA-GTCCCGCGAGCACAAAGGCTTGGTCCTGACTTTACTATCAGCTCTAACTGAACTTACACATGCAAGTCTCCGCATTCCTGTGAGGATGCCCT--TAATCCCCTG-C--CCGGGGACGAGGAGCCGGCATCAGGCAC----GCCCCG------GCAGCCCAAGACGCCTTGCTAAGCCACACCCCCAAGGAAACTCAGCAGTGATAAATATTAAGCCATAAGCGAAAGCTTGACTTAGTTAAGG-TTAAGAGGGCCGGTAAAACTCGTGCCAGCCACCGCGGTTATACGAG-AGACCCTAGTTGATAAC-TACCGGCGTAAAGAGTGGTTACGG-AAAA-----ATATTCAA---TAAAGCCGAACACCCCCTCAGCCGTCATACGCA-CCTGGGG---GCACGAAGATCTA--CTGCGAAAGCAGCTTTAAYT-ATG--------CCTGAACCCACGACAGCTACGACAYAAACT-GGGATTAGATA-CCCCACTATGCCTAGCCGTAAACTTTGATGAAA-ACATACAA-CTGACATCCGCCAGGGAACTACAAGCG-CCAGCTTAAAACCCAAAGGACTTGGCGGTGCCTCAGACCCACCTAGAGGAGCCTGTTCTAGAACCGATAACCCCCGTTCAACCTCACCACCTCTT---GTTTCCCCCGCCTATATACCACCGTCGTCAGCTTACCCTGTGAAGGC-CTTATAGTAAGCAAAATGGGCAAAACCC---AA-AACGTCAGGTCGAG-GTGTAGCGCATGGGGTGGGAAGAAATGGGCTACATTCTCTAA--ATTAGAGCACT--ACGAA--CCACGCTGTGAAA-CCAGCGT--CCAAA-GGTGGATTTAGCAGTAAATAGAAAATAGAGAGTTCTCTTGAAACTGGCTCTGAGGCGCGCACACACCGCCCGYCMSTCWCCCYSAGTTCAAT---TAATCCTTCTAACTAAGAAGTTARCC-GAACAAAGGGGAGGCAAGTCGTAACATGGTAAGTGTACCGGAAGGTGCGCTTGGAATAA--CCAGAGTGTAGCTAAAATAGGAAAGCACCTCCC-TTACACCGAGAAGACATCCGTGCAAATCGG-GTCACCCTGA-GCTGACTAGCTAG-----CCAACACATTTGGTCTAACACCACAACATACATA-TCCCTATAAAACTTAAAATTAA--GTCAACAAACCATTTTTCCACCTTAGTACGGGCGACGGAAAAGGAAAC-ATT--CGAGCAACAGAAAAAGTACCGCAAGGGAAAGCTGAAAGAGAAATGAAACAACCCANTTAAGCCTAGAAAAGCAGAGATTAAATCTCGTACCTTTTGCATCATGATTTAGCCAGCA-AACCTGAGCAAAGAGAACTTTAGTTCAGGCCCCCGAAACTAGACGAGCTACTCCGGGACAGCCTRT-----TATAGGGCCAACCCGTCTCTGTGGCAAAAGAGT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>Salvelinus_alpinus_12S Alignment of 6 sequences: KP019987, KP019988, KP019994, KP019993, AJ319819, AF154851
-----------------------------GCGTAGCTT-AAT-TAAAGCATAACACTGAAGCTGTTAAGATGGACCCTAAAAA-GTCCCACAGGCACAAAGGCTTGGTCCTGACTTTACTATCAGCTTTAACTGAACTTACACATGCAAGTCTCCGCATTCCTGTGAGGATGCCCT--TAATCCCCTG-C--CCGGGGACGAGGAGCCGGCATCAGGCGC----GCCCAG------GCAGCCCAAGACGCCTTGCTAAGCCACACCCCCAAGGAAACTCAGCAGTGATAGATATTAAGCCATAAGCGAAAGCTTGACTTAGTTAAGG-TTAAGAGGGCCGGTAAAACTCGTGCCAGCCACCGCGGTTATACGAG-AGGCCCTAGTTGATAAC-TACCGGCGTAAAGAGTGGTTACGG-AAAA-----ATGTTTAA---TAAAGCCGAACACCCCCTCAGCCGTCATACGCA-CCTGGGG---GCACGAAGACCTA--CTGCGAAAGCAGCTTTAATT-GTA--------CCCGAACCCACGACAGCTACGACACAAACT-GGGATTAGATA-CCCCACTATGCCTAGCCGTAAACTTTGATAGAA-AAATACAA-CTGATATCCGCCAGGGAACTACAAGCG-CCAGCTTAAAACCCAAAGGACTTGGCGGTGCCTCAGACCCACCTAGAGGAGCCTGTTCTAGAACCGATAACCCCCGTTCAACCTCACCACCTCTT---GTTTTCCCCGCCTATATACCACCGTCGTCAGCTTNNNNNNNGAAGGC-CCGATAGTAAGCAAAATGGGTAAAACCC---AA-AACGTCAGGTCGAG-GTGTAGCGCATGGGGTGGGAAGAAATGGGCTACATTCTCTAA--ATTAGAGCACT--ACGAA--CCACGTTGTGAAA-CCAACGT--CCGAA-GGTGGATTTAGCAGTAAACAGAAAACAGAGAGTTCTCTTGAAACTGGCTCTGAGGCGCGCACACACCGCCCGTCACTCTCCCCAAGTTTAAT---TTATCCTTCTAACTAAGAAGTTAACC-AAACAAAGGGGAGGCAAGTCGTAACATGGTAAGTGTACCGGAAGGTGCGCTTGGAATAA--CCAGAGTGTAGCTAAAATAGGAAAGCACCTCCC-TTACACCGAGAAGACATCCGTGCAAATCGG-GTCACCCTGA-GCTGACTAGCTAG-----CCAACACATTTGGTCTAACACCACAACATATATA-ACCCCACAAAACTTAAAATTAA--GTCAACAAACCATTTTTCCACCTTAGTACGGGCGACAGAAAAGGAGAT-AAT--TGAGCAACAGAAAAAGTACCGCAAGGGAAAGCTGAAAGAGAACTGAAACAACCCATTTAAGCCTAGAAAAGCAGAGATTAAATCTCGTACCTTTTGCATCATGATTTAGCCAGCA-AACCAGAGCAAAGAGAACTTTAGTTCAGGCCCCCGAAACTAGACGAGCTACTCCGGGACAGCCTAT-----TATAGGGCCAACCCGTCTCTGTGGCAAAAGAGTGGGACGAGCCCCGAGTAGAGGTGATAAACCTATCGAGCCTAGTTATAGCTGGTTGCTTAGGAAATGAATAGAAGTTCAGCCCCCTGGCTTTCTTAAGACCCCAAGGTAAAACTAACCTTGTCCCAAAGAAACCAAGAGAGTTAATCAAAGGAGGTACAGCTCCTTTGAACAAGGACA-----------------------------------
>Salvelinus_fontinalis_12S Salvelinus fontinalis mitochondrion complete genome
TGGTTATAGGGAACCTCAGCCCAATGCTGGCGTAGCTT-AAT-TAAAGCATAACACTGAAGCTGTTAAGATGGACCCTAAAAA-GTCCCGCAGGCACAAAGGCTTGGTCCTGACTTTACTATCAGCTTTAACTGAACTTACACATGCAAGTCTCCGCACTCCTGTGAGGATGCCCT--TAATCCCCTG-C--CCGGGGACGAGGAGCCGGCATCAGGCGC----GCCCAG------GCAGCCCAAGACGCCTTGCTAAGCCACACCCCCAAGGAAACTCAGCAGTGATAGATATTAAGCCATAAGCGAAAGCTTGACTTAGTTAAGG-TTAAGAGGGCCGGTAAAACTCGTGCCAGCCACCGCGGTTATACGAG-AGGCCCTAGTTGATAAA-TACCGGCGTAAAGAGTGGTTACGA-AAAA-----ATGTTTAA---TAAAGCCGAACACCCCCTCAGCCGTCATACGCA-CCTGGAG---GCACGAAGACCTA--CTGCGAAAGCAGCTTTAATT-ATA--------CCCGAATCCACGACAGCTACGACACAAACT-GGGATTAGATA-CCCCACTATGCCTAGCCGTAAACTTTGATAGAA-AAATACAA-CTGATATCCGCCAGGGAACTACAAGCG-CCAGCTTAAAACCCAAAGGACTTGGCGGTGCCTCAGACCCACCTAGAGGAGCCTGTTCTAGAACCGATAACCCCCGTTCAACCTCACCACCTCTT---GTTTTCCCCGCCTATATACCACCGTCGTCAGCTTACCCTGTGAAGGC-CCTATAGTAAGCAAAATGGGCAAAACCC---AA-AACGTCAGGTCGAG-GTGTAGCGCATGGGGTGGGAAGAAATGGGCTACATTCTCTAA--ATTAGAGCACT--ACGAA--CCACGTTGTGAAA-CCAACGT--CCGAA-GGTGGATTTAGCAGTAAATAGAAAACAGAGAGTTCTCTTGAAACTGGCTCTGAGGCGCGCACACACCGCCCGTCACTCTCCCCAAGTTTAAT---TTATCCTTCTAACTAAGAAGTTAACC-AAACAAAGGGGAGGCAAGTCGTAACATGGTAAGTGTACCGGAAGGTGCGCTTGGAATAA--CCAGAGTGTAGCTAAAATAGGAAAGCACCTCCC-TTACACCGAGAAGACATCCGTGCAAATCGG-GTCACCCTGA-GCTGACTAGCTAG-----CCA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>Osmerus_eperlanus_12S Alignment of 2 sequences: KC441957, EU621493
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AAACTTTGATATTA-ACTTACCT-CTAATATCCGCCAGGGGACTACAAGCG-TTAGCTTAAAACCCAAAGGACTTGGCGGTGCCTCACACCCACCTAGAGGAGCCTGTTCTTGAATCGATAATCCCCGTTCAACCTCACCACCCCTT---GTTAGACCCGCCTATATACCGCCGTCGTCAGCTCACCCTGTGAAGGA-CTTAAAGTGAGCAAAATGGGCAAAACCC---AA-AACGTCAGGTCAAG-GTGCAGCGTATGGGGTGGGAAGAAATGGGCTACATTACCTAT--AACAGGTTACT--ACGAA--TGGGGCCGTGAAA-CCGGTCC--CTGAA-GGTGGATTTAGCAGTAAGGGGGAAATAGAGAGTTCCCCTGAAGCCGGCTCTGAGGCGCGCACACACCGCCCGTCACCC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>Umbra_pygmaea_12S Alignment of 2 sequences: AY430270, AP013049
-------------------------GTTCACGTAGTTT-ACT-TAAAATACAACACTGAAGCTGTTGAGACGGACCCTAAAAA-GTCCCGAGGACACAAAGGCTTGGTCCTGACTTTACTATCTGCTTTAACTAAACTTACACATGCAAGTCTCCGCACCCCCGTGAAGATGCCCT--TAATCCCCTG-C--CCGGGGACGAGGAGCGGGTATCAGGCAC----GCACC-------GCAGCCCAAGACACCTTGCTAAGCCACATCCCCAAGGACACTCAGCAGTGATAAATATTAAATTATAAGCGAAAGCTTGACTTAGTTATAG-TTAAGAGAGCCGGTAAAACTCGTGCCAGCCACCGCGGTTATACGAG-AGGCCCTAGTTGATAGC-CGTCGGCGTAAAGAGTGGTTAAGG-AATT-----TAAATTTA---TAAAGTTGAATAACCCTTTAGCTGTTATACGCA-CCTTGGG---CTATGAAATTCTT--CCGCGAAAGCAGCTTTATGCC-----------CCTGAACCCACGACAGTTATGACACAAACT-GGGATTAGATA-CCCCACTATGCATAACTATAAACTTTGATAAAA-ACTTACAT-CTTACATCCGCCAGGGAACTACAAGCG-TAAGCTTAAAACCCAAAGGACTTGGCGGTGCCTCAGACCCACCTAGAGGAGCCTGTTCTARAACCGATAACCCCCGCTTAACCTCACCGCCCCTT---GTTTTTCCCGCCTATATACCACCGTCGCCAGCTTACCCTGTGAAGGG-CRCATAGTAAGCRAAATGGGCACAACCC---AA-AACGTCAGGTCGAG-GTGTAGCGAATGGGGCGGGAAGAAATGGGCTACATTCTCTAA--TAGAGAAA-----ACGAA--CTACGCTGTGAAA-CCAGCGT--CTGAA-GGTGGATTTAGCAGTAGATAGAAAATAGAGTGTTCTATCAAAATAGGCTCTGAAGCACGCACACACCGCCCGTCACTCTCTCCTAGTCCAGT----CTTTCCTATAATTAAAAAGTTAACA-GGACAAAGGAGAGGCAAGTCGTAACATGGTAAGTGTACCGGAAGGTGCACTTGGAATAA--CCAGAACGTAGCTAAGTTAGAAAAGCACCTCCC-TTACACCGAGGAAACATCCGTGCAAGTCGG-GTCGTCCTGA-GCTGACTAGCTCG-----CCACAACATTTAGATTAACCCTACAACATAAATA-CCCTAACAAAACCCAAACGTA---AAACATAAAACATTCTCCCTCCTTAGTATGGGCGACAGAAAAGGAAAAT-----TGAGCAATAGAAAAAGTACCGCAAGGGAAAGCTGAAAAAGAAATGAAACAACCCATTTAAGCCTAAAAAAGCAGAGATGAAATCTCGTACCTTTTGCATCATGATTTAGCCAGTA-AATTCGAGCAAAGAGCCCTTTAGTCCGAATCCCCGAAACTAGACGAGCTACTCCGGGACAGCCTAT------CTAGGGCCAACCCGTCTCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>Acipenser_sturio_1_12S Alignment of 3 sequences: AF004980, AY544145, Y12663
------------------------------------------------------------------------------------------------CAAAGGCTTGGTCCTGGCCTTACTATCAATTTTAACCCAATTTACACATGCAAGTCTCCGCACCCCCGTGAGAATGCCCT--TAATCCCCCAACCACAGGGGAAAAGGAGCAGGTATCAGGCAC----------GCACCCGCAGCCCAAGACGCCTTGCTAAGCCACACCCCCAAGGGAACTCAGCAGTGATAGACATTGAGCCATGAGCGTAAGCTCGACTCAGCCAGAG-TTAAGAGGGCCGGTAAAACTCGTGCCAGCCACCGCGGTTATACGAG-AGGCCCCAACTGATAGT-CCACGGCGTAAAGCGTGATTAAAGGATGT----CTACTACAC---TAGAGCCAAAAGCCCCCTAAGCTGTCATACGCA-CCTGAAG---GCCCGAAGCCCAA--CCACGAAAGTAGCTCTACCTAACGAGGACCC-CTTGAACCCACGACAACTGAGACACAAACT-GGGATTAGATA-CCCCACTATGCTCAGTCATAAACTTTGGTGATA-AATTACAC-ATATTACCCGCCAGGGTACTACGAGCG-CTAGCTTAAAACCCAAAGGACTTGGCGGTGCCCCAGACCCACCTAGAGGAGCCTGTKCTAGAACCGATAATCCCCGTTAAACCTCACCACTTCTT---GTCATTACCGCCTATATACCGCCGTCGTCAGCTTACCCTGTGAAAGA-CCAATAGTAAGCAAAAATGGCACACCCM---AA-AACGTCAGGTCGAG-GTGTAGCGAATGAAGTGGAAAGARATGGGCTACATTTTCTGA--CACAGAAAACA-CACGAA--TAATACTGTGAAA-CCAGTGA--TTGAA-GGTGGATTTAKCAGTAAAAAGAAAATAGAAAATTCTTTTGAAGCCGGCTATGGGGCGCGCACACACCGCCCGTCACTCTCCTCAAAGGA-----ACACACCAAGTATATAAATCTACAACC-CAAACAAGAGGAGGCAAGTCGTAACATGGTAAGTGTACCGGAAGGTGCACTTG-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>Acipenser_sturio_2_12S_(reversed) Acipenser sturio mitochondrial partial 12S rRNA gene, clone UGP-12
--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGAAAGAAATGGGCTACATTTTCTGA--CACAGAATACA-CACGAA--TAATACTGTGAAA-CCAGTGA--TTGAA-GGTGGATTTAGCAGTAAAAAGAAAATAGAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>Ambloplites_rupestris_12S Alignment of 2 sequences: KM273799, KM282394
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AG-AGGCCCAAGTTGATTAA-CCCCGGCGTAAAGAGTGGTTAAGA-TGAG-----CTATAAAC---TAAAGCCGAATGCCCTCAAAGCTGTTATACGCA-CCCGAAG---GTAAGAAGCTCAA--TCACGAAAGTGGCTTTACACCC----------CCTGAACCCACGAAAGCTATGATACAAACT-GGGATTAGATA-CCCCACTATGCCTAGCCCTAAACATTGATAGTATTTCTACAC-CTGCTATCCGCCCGGGAACTACGAGCA-TTAGCTTGAAACCCAAAGGACTTGGCGGTGCTTTAGATCCACCTAGAGGAGCCTGTTCTAGAACCGATAACCCCCGTTCAACCTCACCCTTCCTT---GTTTTTCCCGCCTATATACCGCCGTCGTCAGCTTACCCTGTGAAGGC-CTCATAGTAAGCAAAATTGGCATAACCC---AA-AACGTCAGGTCGAG-GTGTAGCGTATGGAGGGGGAAGAAATGGGCTACATTCCCTAA--TGCAGAGAA-T--ACGAA--CGACGTACTGAAA-TGTACAT--CCAAA-GGAGGATTTAGCAGTAAGCAGAAAATAGAGTGTTCTGCTGAAATTGGCCCTGAAGCGCGCAC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>Micropterus_salmoides_2_12S Alignment of 5 sequences: AY264823S2, KM273840, AP014537, DQ536425, HQ391896
-------------------------GCTAGCGTAGCTT-AAT-WAAAGCATRACACTGAAGATGTTAAGATGAGCCCTAGAAA-GCTCCGCAGGCACAAAGGCTTGGTCCTGACTTTATTRTCAACTTTAGCTAAACTTACACATGCAAGTATCCGCAYACCCGTGAGAATGCCCC-ACAGTCCCCTG-C--CCGGGGACAAGGAGCTGGTATCAGGCAC----ATTCTA----TTTGAGCCCATRACACCTTGCTTAGCCACACCCTCAAGGGAACTCAGCAGTGATAAACATTAAGCCATAAGTGAAAACTTGACTTAGTYAAMG-CTAAGAGGGCCGGTAAAACTCGTGCCAGCCACCGCGGTTATACGAG-AGGCCCAAGTTGACAAA-YCCCGGCGTAAAGAGTGGTTAAGA-AAAA-----TTTAAAAC---TAAAGCCGAATGCCCTCAAAGCTGTTATACGCA-CCCGAAG---GTAAGAAGCCCAA--TCACGAAAGTGGCTTTACRTTT----------CCYGAACCCACGAAAGCTATGAAACAAACT-GGGATTAGATA-CCCCACTATGCCTAGCCTTAAACATCGATGGYA-ACTTACAC-CTGCCATCCGCCTGGGAACTACGAGCA-TTAGCTTRAAACCCAAAGGACTTGGCGGTGCTTTAGATCCACCTAGAGGAGCCTGTTCTAGAACCGATAACCCCCGTTCAACCTCACCTTTCCTT---GTTTHTYCCGCCTATATACCACCGTCGTCAGCTTACCCTGTGAAGGT-CTAATAGTAAGCAAAATTGGCAYAACCC---AA-AACGTCAGGTCGAG-GTGTAGCGTATGGAAAGGGAAGAAATGGGCTACATTCCCTTR--YACAGGRAA-T--ACGRA--CGATAAACTGAAA-TGTTTTT--CCAAA-GGAGGATTTAGCAGTAAGYAGAAAATAGAGTGTTCTRCTGAAAATGGCCCTGAAGCGCGCACACACCGCCCGTCACTCTCCCCAAGCCCAAG----AACTTTAGTAATTAAAACCATACAA-TCGCAAAGGGGAGGCAAGTCGTAACATGGTAAGTGTACCGGAAGGTGCACTTGGTTAAA--TCAGAGTATAGCTAAGACAGAAAAGCATCTCCC-TTACACTGAGAAGTCATCCGTGCAAATCGG-ATTACCCTGACGCCCAATAGCTAGNNNNNCCCCCYRACCAAAAACAATTAAYCACCATTAAT-AAMCCCAAACACACTAGTGTTAAA-CTAAACAAAACATTTTCCCACCTCAGTACGGGCGACGGAAGAGGAACAGAC---GGCGCAATAGAGAAAGTACCGCAAGGGAACGCTGAAAGAGAAATGAAATAACCCAGTAAAGCCCTAAGAAGCAGAGATTTTAACTCGTACCTTTTGCATCATGATTTAGCTAGTAATACCCRGGCAAAGAGAACTTTAGTCTGACCCCCCGAAACTAWGTGAGCTACTCCAAGGCAGCCTAT----WAATAGGGCACACCCGTCTC----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>Sander_lucioperca_12S Sander lucioperca 12S ribosomal RNA gene, partial sequence; mitochondrial
--------------------------------------------------------------------------------------------AGCACAAGGCTTGTGTCCTGACTTTACTATCAATTCTAGCTAAACTTACACATGCAAGTATCCGCATCCCCGTGAGAATGCCCT-ACAGTTCCCTG-C--CCGGGAACAAGGAGCTGGTATCAGGCAC----ATCCCT-----ACTAGCCCATGACGCCTTGCTTAGCCACACCCTCAAGGGAACTCAGCAGTGATAGACATTAAGCCATAAGTGAAAACTTGACTTAGTTAAAG-CTAAGAGGGCCGGTAAAACTCGTGCCAGCCACCGCGGTTATACGAG-AGGCCCAAGTTGATAGA-CATCGGCGTAAAGCGTGGTTAAGA-CAAA-----AACAAAAC---TAAAGCCGAACACCTTCAGAGCTGTTATACGCA-CCCGAAG---GTAAGAAGTTCAA--CCACGAAAGTGGCTTTATTACC----------CCTGAACCCACGAAAGCTACGATACAAACT-GGGATTAGATA-CCCCACTATGCCTAGCCATAAACATTGGTAGCA-CACTACAC-CCACTACCCGCCTGGGAACTACGAGCA-TCAGCTTGAAACCCAAAGGACTTGGCGGTGCTTTAGATCCACCTAGAGGAGCCTGTTCTAGAACCGATAACCCCCGTTCAACCTCACCTTTCCTT---GTCTTTCCCGCCTATATACCGCCGTCGTCAGCTTACCCTGTGAAGGT-TTAATAGTAAGCAAAATTGGTACAACCT---AA-AACGTCAGGTCGAG-GTGTAGCGTATGGGAAGGGAAGAAATGGGCTACATTTCCTAC--CACAGGAAA-T--ACGAA--TGATGCACTGAAA-TGTGTAT--CTGAAGGGAGGATTTAGCAGTAAGCAGGAAATAGAGCGTCCCGCTGAAATTGGCCCTGAAGCGCGCACACACCGCCCGTCACTCTCCCCAAGCCTACC----AACTAAAATAACTAAAATCTTATAA-CCGCGAAGGGGAGGCAAGTCGTAACATGGTAAGTGTACCGGAAGGTGCACTGAA----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>Stizostedion_lucioperca_12S Stizostedion lucioperca 12S ribosomal RNA gene, partial sequence; mitochondrial
------------------------------------------------------------------------------------------------CAAAGGCTTGGTCCTGACTTTACTATCAATTCTAGCTAAACTTACACATGCAAGTATCCGCATCCCCGTGAGAATGCCCT-ACAGTTCCCTG-C--CCGGGAACAAGGAGCTGGTATCAGGCAC----ATCCCT-----ACTAGCCCATGACGCCTTGCTTAGCCACACCCTCAAGGGAACTCAGCAGTGATAGACATTAAGCCATAAGTGAAAACTTGACTTAGTTAAAG-CTAAGAGGGCCGGTAAAACTCGTGCCAGCCACCGCGGTTATACGAG-AGGCCCAAGTTGATAGA-CATCGGCGTAAAGCGTGGTTAAGA-CAAA-----AACAAAAC---TAAAGCCGAACACCTTCAGAGCTGTTATACGCA-CCCGAAG---GTAAGAAGTTCAA--CCACGAAAGTGGCTTTATTACC----------CCTGAACCCACGAAAGCTACGATACAAACT-GGGATTAGATA-CCCCACTATGCCTAGCCATAAACATTGGTAGCA--ACTACAC-CCACTACCCGCCTGGGAACTACGAGCA-TCAGCTTGAAACCCAAAGGACTTGGCGGTGCTTTAGATCCACCTAGAGGAGCCTGTTCTAGAACCGATAACCCCCGTTCAACCTCACCTTTCCTT---GTCTTTCCCGCCTATATACCGCCGTCGTCAGCTTACCCTGTGAAGGT-TTAATAGTAAGCAAAATTGGTACAACCT---AA-AACGTCAGGTCGAG-GTGTAGCGTATGGGAAGGGAAGAAATGGGCTACATTTCCTAC--CACAGGAAA-T--ACGAA--TGATGCACTGAAA-TGTGTAT--CTGAA-GGAGGATTTAGCAGTAAGCAGGAAATAGAGCGTCCCGCTGAAATTGGCCCTGAAGCGCGCACACACCGCCCGTCACTCTCCCCAAGCCTACC----AACTAAAATAACTAAAATCTTATAA-CCGCGAAGGGGAGGCAAGTCGTAACATGGTAAGTGTACCGGAAGGTGCACTTGGAAAAAT----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>Cottus_gobio_12S Alignment of 2 sequences: denovo2, AB188189
--------------------------------------------------------------------------------------------------AAGGCTTGGTCCTGACTTTATTATCAACTTTAGCCAAACTTACACATGCRAGTATCCGCACCCCTGTGAGAATGCCCTAATAGTTCCCCG-C--CCGGGAACAAGGAGCTGGTATCAGGCAC----AACCCT----AYTGAGCCCACGACACCTTGCTTAGCCACACCCTCAAGGGAGCTCAGCAGTGATAAACATTAAGCCATAAGTGAAAACTTGACTTAGTTAAAG-CTAAGAGGGCCGGTAAAACTCGTGCCAGCCACCGCGGTTATACGAG-AGGCCCAAGTTGACAAA-CACCGGCGTAAAGCGTGGTTAAGT-TAAA-----AATCMTAC---TAAAGCCAAACATCTTCAAGACTGTTATACGTAA-CCGAAG---ACAGGAAGTTCAA--CCACGAAAGTCGCTTTATCTGA----------TCTGAATCCACGAAAGCTAAGGAACAAACT-GGGATTAGATA-CCCCACTATGCCTAGCCCTAAACATTGATAGTA-CAATACAC-CCACTATCCGCCCGGGTACTACGAGCA-ATAGCTTAAAACCCAAAGGACTTGGCGGTGCTTTAGATCCACCTAGAGGAGCCTGTTCTAGAACCGATAACCCCCGTTCAACCTCACCCTTCCTT---GTTTTACCCGCCTATATACCGCCGTCGTCAGCTTACCCTGTGAGGGA-CTAATAGTAAGCAGAACTGGTACAACCT---AA-AACGTCAGGTCGAG-GTGTAGCGTATGGAGGGGGAAGAAATGGGCTACATTCGCTAC--CACAGCGAA-C--ACGAA--TGATGCACTGAAA-TACACAT--CTGAA-GGAGGATTTAGCAGTAAGCTGGAAATAGAGCGTCCCGCTGAAACTGGCCCTGAAGCGCGCACACACCGCCCGTCACTCTCCCCAAAAGCCCC----AA-TCAGTTAACTAAAACCTAATAA-TCAAAAAGGGGAGGCAAGTCGTAACATGGTAAGTGTACCGGAAGGTGCACTTGGTAAAA--TCAGAGCGTGGCTAAGATAGAAAAGCATCTCCC-TTACACTGAGAAGTCACCCGTGCAAGCCGG-GTCGCCCTGATGCCCAACAGCTAG----CCCACCTAAACAAACACAACAAACCCCTGTTAATAACCCCTAAATACCCTAGTATTTAAATTAAACAAACCATTTTTCCCCCTTAGTATAGGCGATAGAAAAGGACAAAC----GGCGCAATAGAGAGAGTACCGCAAGGGAACGCTGAAAGAGAAATGAAACAACCCAGTGAAGCCTAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>Pungitius_pungitius_12S Alignment of 6 sequences: AF354987, AY283319, AY283320, Pungitius, AB445130, denovo25
-------------------------GCTAGCGTAGCTT-AAT-TAAAGCATAACACTGAAGATGTTAAGATGGGCCCTAGAAA-GCCTCGCAAGCACAAAGGCTTGGTCCTGACTTTAACATCAACTTTAGCTATACTTACACATGCAAGTATCCGCACCCCTGTGAGAATGCCCC-CCAGTTCCCCG-T--CCGGGAACAAGGAGCTGGTATCAGGCAC----ACTT-------TGAAGCCCACGACGCCTTGCTTAGCCACACCCCCAAGGGAATTCAGCAGTGACAAACATTAAGCTATAAGTGAAAACTTGACTTAGTTAAAG-CTAAGAGGGCCGGTAAAACTCGTGCCAGCCACCGCGGTTATACGAG-AGGCCCAAGTTGATGAA-CATCGGCGTAAAGAGTGGTTAAGC-TAAA-----ATTAAAAC---TAAAGCCGAACGTCCCCAAAGCTGTTATACGCA-CCCGGGG---GTAAGAAGTTCAA--CCACGAAGGTGGCTTTATTAAA----------CCTGAACCCACGAAAGCTACGGCACAAACT-GGGATTAGATA-CCCCACTATGCCTAGCCCTAAACATTGATAGAA-TTTTACAA-CCTCTATCCGCCCGGGGACTACAAGCA-TCAGCTTGAAACCCAAAGGACTTGGCGGTGCTTTAGATCCACCTAGAGGAGCCTGTTCTAGAACCGATAACCCCCGTTCAACCTCACCCCTCTTT---GTTAATACCGCCTATATACCACCGTCGTCAGCTTACCCTGTGAGGGA-TCAATAGTAAGCTTAACTGGTACAACCC---TA-AACGTCAGGTCGAG-GTGTAGCGTATGGAGGGGGAAGAAATGGGCTACATTCGCTAC--AACAGCGAA-C--ACGAA--TGATGTCCTGAAA-CGTACAT--CTGAA-GGAGGATTTAGCAGTAAGTAGAAAATAGAGTGTTCTACTGAAATTGGCCCTGAAGCGCGCACACATCGCCCGTCACTCTCCCCAAGCCTAAT----AATACAATTAAMTAAAAACTAATAA-TTGCAAAGGGGAGGCAAGTCGTAACATAGTAAGTGTACCGGAAGNTGCACTTGGAAAAG---CAGAGCGTAGCTAAGATAGCAAAGCATCTCCC-TTACACTGAGAAGTCATCCGTGCAAATCGG-ATCGCCCTGATGCCTAACAGCTAG----CCCACTCAAACAACTTCAAYAAAACGATATTTATAACCCCAAAAGACACTAATTTTAAGTTTAAACAAACCATTTTTCCCCCTTAGTATAGGCGATAGAAAAGGATACA-----GGCGCAATAGAGAAAGTACCGCAAGGGAACGCTGAAAGAGAAGTGAAATAATCCAGAGAAGCTAAGAAAAGCAGAGATTAAACCTCGTACCTTTTGCATCATGATTTAGCAAGTGTAACTTAAGCAAAGAGAACTATAGTTTAATGCCCCGAAACTACGTGAGCTACTCCAAGACAGCCTAT----TAATAGGGCACACCCGTCTCTGT-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>Lepomis_gibbosus_12S Alignment of 4 sequences: JN655528, KM273834, KM282424, denovo4
-----------------------------------------------------------------------------------------------------------------------------------------------------------------------GAATGCCCTTACAGTTTCCCG-C--CCGGAAACAAGGAGCTGGTATCAGGCAC----ACCCAT----ATAAAGCCCACGACACCTTGCTAAGCCACACCCTCAAGGGAACTCAGCAGTGATAAACCTTAAGCCATAAGTGAAAACTTGACTTAGTTACAG-CTAAAAGAGCCGGTAAAACTCGTGCCAGCCACCGCGGTTATACGAG-AGGCTCAAGTTGATAAA-CCCCGGCGTAAAGAGTGGTTAAGG-AAGA-----TTAAAAAC---TAAAGCCGAATGCTTTCAAAGCTGTTATACGC-TTCCGAGA---GTAAGAAGATCAA--CTACGAAAGTGACTTTATAGCC----------CCTGACCCCACGAAAGCTATGGCACAAACT-GGGATTAGATA-CCCCACTATGCCTAGCCCTAAACATTGGCAACA-CCCTACAT-CTGTTGCCCGCCAGGAAACTACGAGCA-TTAGCTTAANACCCAAAGGACTTGGCGGTGCTTTAGATCCACCTAGAGGAGCCTGTTCTAGAACCGATAACCCCCGTTCAACCTCACCCTTCCTT---GTTAGACCCGCCTATATACCACCGTCGTCAGCTTACCCTGTGAAGGC-CCCATAGTAAGCATAATTGGCACAGCCC---AG-AACGTCAGGTCGAG-GTGTAGCGTATGGAGGGGGAAGAAATGGGCTACATTCTTTAA--CAGAAAGAA-T--ACGAA--TGATTGACTGAAA-TGTCTTT--CCGAA-GGAGGATTTAGCAGTAAGCAAGAAATAGAGAGTCCTGCTGAAATTGGCTCTGAAGCGCGCACACACCGCCCGTCACTCTCCCCAAGCCTAAA--AAACCTAAGATAATTAAAACTAAACCA-CTGCARAGGGGAGGCAAGTCGTAACATGGTAAGTGTACCGGAAGGTGTACTTGGTAAAA--TCAGAGTGTAGCTAAGACAGAAAAGCATCTCCC-TTACACCGAGAAGTCACCCGTGCAAATCGA-GTCACCCTGAAGCCCAACAGCTAG------CCCAATACCAAAAGCAACAAACCATCATTTAT-ACCCCCAAATACACTGATACCCT--TCAAACAAACCATTTTTCCCCCTAAGTACGGGCGACAGAAAAGGGACTATA---GGCGCTATAGAAAAAGTACCGCAAGGGA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>Platichthys_flesus_2_12S Platichthys flesus mitochondrial gene for 12S rRNA, partial sequence
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------CCACTATGCTTAGCCCTAAACATCGATTGCA-CCATACAC-TCCATATCCGCCCGGGAATTATGAACG-TCAGTTTAAAACCCAAAGGACTTGGCGGTGCTTAACATCCACCTAGAGGAGCCTGTTCTAGAACCGATAACCCCCGTTAAACCTCACCCTCTCTT---GTTTTATCCGCCTATATACCACCGTCGTCAGCTTACCCTGTGAAGGA-TTTACAGTAAGCAAAATTGGCACAGCCC---AA-AACGTCAGGTCGAG-GTGTAGTGAATGAGGGGGGAAGAAATGGGCTACATTTGCTAAG-TATAGCAAAC---ACGAA--TGTTGCATTGAAA-CATGCAG--CTGAA-GGAGGATTTAGCAGTAAGCAGGAAGTAGAGCGTCCCGCTGAAACTGGCCCTAAAGCGCGCACACACCGCCCGTCCACCCTCCCCAAGCCCCCTCCGAACTAATCTAATTAAAAGCCAACAACCCGCGAAGGGGAGGAAA-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>Lota_lota_1_12S_(reversed) Lota lota mitochondrial partial 12S rRNA gene
----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TGTATGGTTGTTAACATTGATGGTT-TTATACTT-AAACCATCCGCCTGGGTACTACGAGCA-TTAGCTTAAAACCCAAAGGACTTGGCGGTGCTTTAGACCCCCCTAGAGGAGCCTGTTCTAGAACTGATAACCCCCGTTAAACCTCACCATCCTTT---GTTTAACCCGCCTATATACCACCGTCGTCAGCTTACCCTGTGAAGGT-AAAATAGTAAGCATAAATGGCAAAGCCA---AA-AACGTCAGGTCGAG-GTGTAGCGAATGGGATGGGAAGAAATGGGCTACATTCTCTAC--TACAGAGAAT---ACGAA--TGGTATTTTGAAAAGAAATAC--CTGAA-GGAGGATTTAGCAGTAAGTAAGGAATAGAGCGCCGTAATGAAAACGGCCCTGAAGCT---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>Lota_lota_2_12S Alignment of 4 sequences: AP004412, KC844053, KM201364, KM363244
--------------------------CTATCGTAGCTT-AAT-TAAAGTATAATACTGAAGATATTAAGATGGGCCCTAGAAA-GTCCCGAAAGCACAAAGGTTTGGTCCTGACTTTACTATCAATTCTACCCCAATTTACACATGCAAGTCTCCGCATCCCCGTGAGAATGCCCT--TAATGTCCTG-C--CCGGAATTAAGGAGCAGGCATCAGGCAC----------RTCAAATCAGCCCATAACGCCTTGCTCAGCCACACCCCTACGGGTATTCAGCAGTGATAAAATTTAAGCCATAAGTGAAAGCTTGACTTAGTTAGGG-TTAAGAGGGCCGGTAAAACTCGTGCCAGCCACCGCGGTTATACGAG-AGGCCCAAGTTGATGAA-AAACGGCGTAAAGCGTGGTTAAGAAAACA------AGAAAAA---TAGGGCCGAACAGCCTCAAAGCAGTTATACGCATT-CGAGG---CCACGAAGCTCAA--TCACGAAAGTGGCCCTACAAATC---------TCTGATTCCACGAAAGCCATAAAACAAACT-GGGATTAGATA-CCCCACTATGTATGGTTGTTAACATTGATGGTT-TTATACTT-AAACCATCCGCCTGGGTACTACGAGCA-TTAGCTTAAAACCCAAAGGACTTGGCGGTGCTTTAGACCCCCCTAGAGGAGCCTGTTCTAGAACTGATAACCCCCGTTAAACCTCACCATCCTTT---GTTTAACCCGCCTATATACCACCGTCGTCAGCTTACCCTGTGAAGGT-AAAATAGTAAGCATAAATGGCAAAGCCA---AA-AACGTCAGGTCGAG-GTGTAGCGAATGGGATGGGAAGAAATGGGCTACATTCTCTAC--TACAGAGAAT---ACGAA--TGGTRTTTTGAAAAGAAAYAC--CTGAA-GGAGGATTTAGCAGTAAGTAAGGAATAGAGCGCCCTACTGAAAACGGCCCTGAAGCGCGCACACACCGCCCGTCACTCTCTCCAAATAGACC----CTAAATATTACCTAAAATGTTTTAT-ATAATAAGGGGAGGCAAGTCGTAACATGGTAAGCGTACCGGAAGGTGCGCTTGGATGAA--TCAGAGCATAGCCAAGTTAGTAAAGCATCTCCC-TTACACCGAGAAGTCGTCCGTGCAAATCGG-ACTGCCCTGATGCCTAACAGCTAGCCTCAACAATCAAATTTTATTATTG---------------TGAAACTAAAAACTCATAATATAATTAAATAAACCATTTTACCCCCTAAGTATGGGCGACAAAAAAGGAAAAA-----AGAGCAACAGATAAAGTACCGCAAGGGAACGCTGAAAAAGAAGTGAAATAAACCATTTAAGCACCGAACAGCAGAGTTTACCACTCGTACCTTTTGCATCATGATTTAGCAAGTAAACTACAAGCAAAGAGCCCTTTAGTTTGTAACCCCGAAACTGAGCGAGCTACTCCAAGACAGCCTAC------ATAGGGCAAACCCGTC------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>Alosa_alosa_12S Alosa alosa mitochondrial DNA, complete genome
-------------------------GATAGTGTAGCTTAGAG-TAAAGCATAACATTGAAGATGTTAGTACGGGTCGTAGAAA-GCCCCACGGTCACAAAAGTTTGGTCCTGACTTTATTATCAGCTCTAACCCAATTTACACATGCAAGCCTCCGCACCCCTGTGAGGATGCCCT--CAATCCCCCG-T--CCGGGGACGAGGAGCCGGTATCAGGCAC------------ACTTTTAGCCCAAGACGCCTTGCTTAGCCACACCCCCAAGGGAATTCAGCAGTGATAGACATTAAGCCATAAGTGAAAACTTGACTTAGTCAGGG-TTAAGAGGGCCGGTAAAACTCGTGCCAGCCACCGCGGTTATACGAG-AGGCCCTAGTTGATTC--ACTCGGCGTAAAGAGTGGTTATGG-AGAA-----TAAAATAC---TAAAGCCGAAGGCCCCTTAGGCCGTCATACGCA-CCTAGAG---GCTCGAATTATAG--ACACGAAAGTAGCTTTACCCCTTCCCA-----CCAGAACCCACGACAGCTGGGACACAAACT-GGGATTAGATA-CCCCACTATGCCCCGCCGTAAACTTAGATATTC-CAGTACAA-CAAATATCCGCCAGGGGACTACGAGCG-CCAGCTTAAAACCCAAAGGACTTGGCGGTGCTTCAGACCCCCCTAGAGGAGCCTGTTCTAGAACCGATAACCCCCGTTCAACCTCACTACTCCTT---GCTTTTCCCGCCTATATACCACCGTCGCCAGCTTACCCTGTGAAGGT-ACTACAGTAAGCAGAATGAGTAATACTC---AA-AACGTCAGGTCGAG-GTGTAGCGTACGAAGTAGGAAGAAATGGGCTACATTGTCTGA--TCCAGATTATT-CACGGA--AGATTGTCTGAAA-CGACAAT--CCGAA-GGTGGATTTAGCAGTAAAGGGGGAATAGAGTGCCCCCTTGAAGCCGGCTCTGAAGCGCGCACACACCGCCCGTCACTCTCCCCAACAACCGC-CCACACCAAGGTAAATAACACAATACCC-GTCACAAGGGGAGGCAAGTCGTAACATGGTAAGTGTACCGGAAGGTGCACTTGGAATAA--TCCGGGTGTGGCTGAGACAGT------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>Alosa_fallax_12S Alosa fallax voucher H49 12S ribosomal RNA gene, partial sequence; tRNA-Val gene, complete sequence; and 16S ribosomal RNA gene, partial sequence; mitochondrial
------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------TATTC-CAGTACAA-CAGATATCCGCCAGGGGACTACGAGCG-CCAGCTTAAAACCCAAAGGACTTGGCGGTGCTTCAGACCCCCCTAGAGGAGCCTGTTCTAGAACCGATAACCCCCGTTCAACCTCACTACTCCTT---GCTTTTCCCGCCTATATACCACCGTCGCCAGCTTACCCTGTGAAGGC-ACTACAGTAAGCAGAATGAGTAATACTC---AA-AACGTCAGGTCGAG-GTGTAGCGTACGAAGTAGGAAGAAATGGGCTACATTGTCTGA--TCCAGATTATT-CACGGA--AGATTGTCTGAAA-CGACAAT--CCAAA-GGTGGATTTAGCAGTAAAGGGGGAATAGAGTGCCCCCTTGAAGCCGGCTCTGAAGCGCGCACACACCGCCCGTCACTCTCCCCAACAACCGC-CCACACCAAGGTAGATAACACAACACCC-GTCACAAGGGGAGGCAAGTCGTAACATGGTAAGTGTACCGGAAGGTGCACTTGGAATAA--TCCGGGTGTGGCTGAGACAGTTAAGCGACTCCC-TTACACCGAGAATACATTCATGCAAGTTGG-ATCGCCCGGA-ACTAAACAGCTAG---CTCAAACTATAATGAACCAAGTTAATGATATAAATAGTCCTACAGAAAGCTGAAAGCA---CAAACTAAACCATTCGACCACCCCAGTACGGGCGACAGAAAAGGAAATAAA---GACGCTATAGACAAA---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>Ponticola_kessleri_12S Ponticola kessleri mitochondrion, complete genome
-------------------------GCTAATGTAGCTT-AAG-TAAAGCATAACACTGAAGATGTTAAGACAAGCCCTAGAAA-GCTTCAATAGCACAAAAGCTTGGTCCTGACTTTATTATCATCTTTGATTAAATTTATACATGCAAGTCTCCGCATCCCTGTGAGAATGCCCT--ACCTGCCCGC-C--ACGGGAAAGAGGAGCTGACATAAGGCAC----AACCCT--ACCGTTAGCCCAAAACGTCTTGCTTAGCCACACCCCTAAGGGAATACAGCAGTAATAAACATTAAGCAATAAGTGCAAACTTGACTTAGTTATAA-TCAAGAGGGCCGGTTAAACTCGTGCCAGCCACCGCGGTTATACGAG-AGGCCCGAGTTGACAAACATTCGGCGTAAAGCGTGGTTAATA-ACTT-------ATTTAC---TAAAGCCAAACACCTTTAAGGCTGTTATACGCC-CCCAAAG---GTAGGAAGACCCC--TCACGAAAGTAGCTTTAATTAC----------TATGAATCCACGAAAGCTAGGAAACAAACT-GGGATTAGATA-CCCCACTATGCCTAGCCATAAACACAAAGGGTG-TTTTAC---CCACCCTTCGCCAGGGAACAACGAGCC-CCAGCTTAAAACCCAAAGGACTTGGCGGTGCTTTAGACCCCCCTAGAGGAGCCTGTTCTAGAATCGATATTCCCCGTTCAACCTCACCCCCTCTT---GTTTTTCCCGTCTATATACCGCCGTCGTCAGCTTACCCTGTGAAGGG-TTAATAGTAAGCAAAATTGGTAAAACCT---AA-AACGTCAGGTCAAG-GTGTAGCATACGGGGGGGGAAGAAATGGGCTACATTTGCTGC--CCCAGCAAAA---ACGGA--CGTTGCACTGAAA-TAAGCAT--CTGAA-GGAGGATTTAGCAGTAAGAGGGGAATAGAGCGCCCCCCTGAAAATGGCCCTGAAGCGCGCACACACCGCCCGTCACTCTCCCCGAAACCTAA------AAAAGATAAATAATGAAACAACT-AAATAAAGGGGAGGCAAGTCGTAACATGGTAAGTGTACCGGAAGGTGTACTTGGAAAAC-CCCAGAACGTAGCTAA-ATAGCATAGCATCTCAC-TTACACCGAGAAGACGCCTGTGCAAATCAG-GCCGCCCT--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>Anguilla_anguilla_12S Alignment of 19 sequences
-------------------------GTTAACGTAGCTTAAACAAAAAGCATGGCACTGAAGATGCCAAGATGAGCCATAAAAA-GCTCCGATGACACAAAAGCCTGGTCCTGACTTTAACATCAGTTCTGGCCTGACTTACACATGCAAGTACCCGCGCACCCGTGAGAATGCCCT--ATATCCCCT--C--CCGGGGAAAAGGAGCCGGCATCAGGCAC----------ACCAACGTAGCCCAAAACGCCTTGCTCAGCCACRCCCACAAGGGAATTCAGCAGTGATAGATATTAAGCAATGAGCGAAAGCTCGACTTAGTCAAGG-CCAAAAGAGCCGGTAAAACTCGTGCCAGCCACCGCGGTTATACGAG-GGGCTCAAATTGATATT-ACACGGCGTAAAGCGTGATTAAAAAACAA-------AAAAAC---TAAAGCCAAACACTTCCCAAGCTGTCATACGCTA-CCGGAACATAAACGAAGCCCTA--TAACGAAAGTAGCTTTAACACC----------TTTGAACTCACGACAGTTGAGGAACAAACT-GGGATTAGATA-CCCCACTATGCTCAACCTTAAACAACGATGACA-MCATACAA-ATATCATCCGCCAGGGGACTACGAGCG-TTAGCTTAAAACCCAAAGGACTTGGCGGTGCCTCAAACCCACCTAGAGGAGCCTGTTCTATAACCGATAATCCACGTTAAACCTCACCATCTCTT---GCCTAAACCGCCTATATACCGCCGTCGCCAGCTTGCCTCTTGAGAGA-TTAAAAGCAAGCCTAATGGGTAYTACCC---AA-AACGTCAGGTCGAG-GTGTAGCGAATGAGATGGAATGAAATGGGCTACATTTTCTGG--TACAGAAAAAC--ACGAA--AAGTGCCATGAAA-TAAGCACGACTGAA-GGTGGATTTAGCAGTAAAAAGAAAATAGAGAGTTCTTTTGAAACAGGCTCTGAGGCGCGTACACACCGCCCGTCACTCTCCTCGAATAACAA---TAAAGACAATTCATAAAACAATAAGA-ACAAAAAGAGGAGGCAAGTCGTAACACGGTAAGTGTACCGGAAGGTGCACTTGGATAAA--TTAGAATGTAGCTAAAA-AGAACAGCATCTCCC-TTACACCGAGAAGACACTCGTGCAAATCGA-GTCATTCTAA-GCAAAACAGCTAG---CCTAACCATAATAAAACAAATGACCAACCATATATA-ACAAAACACACCCCAACA------TAAAATAAAACATTCTTCCCCCTAAGTATAGGTGATAGAAAAGGACAAACTTATAGCGCAATAGAAAAAGTACCGCAAGGGAAAGCTGAAAGAGAAATGAAACAACCCATACAAGCAAAAAAAAGCAGAGACTAAAACTCGTACCTTTTGCATCATGGTTTAGCAAGTAAAAATCAAGCAAAGAGAACTTTAGTTTGAAACCCCGAAACTAGACGAGCTACTCCGGGGCAGCCTAT-------TAGGGCCAACCCGTCTCTGTGGCAA--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
>Micropterus_salmoides_1_12S_(reversed) Micropterus salmoides 12S ribosomal RNA gene, mitochondrial gene for mitochondrial RNA, partial sequence
---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------GGTTTACGACCTCGATG--TTGGATCAGGATTAGATCCACCTAGAGGAGCCTGTTCTAGAACCGATAACCCCCGTTAAACCTCACCTNNTTCTTNGTTTATNCCCGCCTATATACCACCGTCGTCAGCTTACCCTGTGAAGGT-CTAATAGTAAGCAAAATTGGCATNAACCCAAAN-NACGTCAGGTCGAGNGTGTAGCCTANTGGAAGGGAAGAAATGGGCTACATTCCCTTGC-ANCAGGGNAAT--ACGAA---GATAAACTGAAAGTNTTTTT--CCAAA-GGAGGATTTAG-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------