#NEXUS [written Wed Feb 28 22:13:52 CET 2018 by Mesquite version 3.31 (build 859) at GEOSPC08/134.21.31.114] BEGIN TAXA; TITLE Taxa; DIMENSIONS NTAX=154; TAXLABELS Apalone_spinifera Caretta_caretta Carettochelys_insculpta Chelodina_colliei Chelodina_longicollis Chelonia_mydas Chelonoidis_chilensis Chelus_fimbriatus Chelydra_serpentina Chrysemys_picta Dermatemys_mawii Dermochelys_coriacea Elseya_dentata Emys_orbicularis Eretmochelys_imbricata Erymnochelys_madagascariensis Testudo_hermanni Geoclemys_hamiltonii Gopherus_polyphemus Kinosternon_flavescens Lepidochelys_kempii Lepidochelys_olivacea Lissemys_punctata Macroclemys_temminckii Myuchelys_latisternum Natator_depressus Pelodiscus_sinensis Pelomedusa_subrufa Phrynops_geoffroanus Platysternon_megacephalum Staurotypus_triporcatus Sternotherus_odoratus Trachemys_scripta Podocnemis_expansa Odontochelys_semitestacea Proganochelys_quenstedti Adocus_beatus Annemys_levensis Araripemys_barretoi Archelon_ischyros Baena_arenosa Baptemys_wyomingensis Boremys_pulchra Bouliachelys_suteri Chisternon_undatum Desmatochelys_padillaii Desmatochelys_lowi Dracochelys_bicuspis Emarginachelys_cretacea Glyptops_plicatulus Judithemys_sukhanovi Kallokibotion_bajazidi Kayentachelys_aprix Kirgizemys_hoburensis Meiolania_platyceps Mesodermochelys_undulatus Ordosemys_leios Ordosemys_skull Palaeochersis_talampayensis Plesiobaena_antiqua Plesiochelys_etalloni Pleurosternon_bullockii Protostega_gigas Puppigerus_camperi Rhinochelys_nammourensis Santanachelys_gaffneyi Sinemys_lens Solnhofia_parsonsi Jurassichelon_oleronensis Toxochelys_latiremis Trinitichelys_hiatti Xinjiangchelys_radiplicatoides Xinjiangchelys_wusu Annemys_latiens Basilochelys_macrobios Changmachelys_bohlini Eileanchelys_waldmani Chubutemys_copelloi Liaochelys_jianchangensis Manchurochelys_manchoukuoensis Otwayemys_cunicularius Plastomenus_aff._thomassii Sinemys_brevispinus Stylemys_nebrascensis Xenochelys_formosa Adocus_amtgai Alienochelys_selloumi Allopleuron_hoffmanni Angolachelys_mbaxi Argillochelys_africana Argillochelys_cuneiceps Ashleychelys_palmeri Australochelys_africanus Basilemys_variolosa Brachyopsemys_tingitana Calcarichelys_gemma Carolinochelys_wilsoni Chelonoidis_gringorum Chelosphargis_advena Chengyuchelys Chitracephalus_dumonii Condorchelys_antiqua Corsochelys_haliniches Ctenochelys_stenoporus Dinochelys_whitei Dorsetochelys_delairi Echmatemys_wyomingensis Eochelone_brabantica Erquelinnesia_gosseleti Euclastes_acutirostris Euclastes_platyops Euclastes_wielandi Heckerochelys_romani Helochelydra_nopcsai Hoplochelys_crassa Hoyasemys_jimenezi Indochelys_spatulata Itilochelys_rasstrigin Lophochelys Macroclemys_schmidti Mexichelys_coahuilaensis Mongolemys_elegans Mongolochelys_efremovi Neurankylus_eximius Nichollsemys_bareri Ninjemys_oweni Niolamia_argentina Notoemys_laticentralis Notoemys_oxfordiensis Notoemys_zapatocaensis Ocepechelon_bouyai Pacifichelys_spp. Patagoniaemys_gasparinae Peligrochelys_walshae Platychelys_oberndorferi Portlandemys_macdowelli Prochelidella_cerrobarcinae Procolpochelys_grandaeva Proterochersis_robusta Protochelydra_zangerli Rhinochelys_pulchriceps Rhinochelys_sp. Sandownia_harrisi Shachemys_laosiana Siamochelys_peninsularis Sinemys_gamera Syllomus_aegyptiacus Tasbacka_aldabergeni Tasbacka_ouledabdounensis Terlinguachelys_fischbecki Warkalania_carinaminor Xinjiangchelys_junggarensis Yaminuechelys_maior Yehguia_tatsuensis ; END; BEGIN CHARACTERS; TITLE Character_Matrix; DIMENSIONS NCHAR=263; FORMAT DATATYPE = STANDARD GAP = - MISSING = ? SYMBOLS = " 0 1 2 3 4 5"; CHARSTATELABELS 1 'NA, presence/absence', 2 NA_medial_contact, 3 NA_size_of_nasals, 4 PF_medial_contact, 5 'PF pref-vomer contact', 6 'PR pref-palatine contact', 7 PF_dorsal_exposure, 8 PF_cranial_scutes, 9 'LA presence/absence', 10 FR_orbit_contribution, 11 FR_medially_fused, 12 FR_direction_orbits, 13 'PA parieta-squamosal contact', 14 PA_foramen_nervi_trigemini, 15 PA_posterodorsal_margin, 16 PA_contribution_proc._troch._otic., 17 'PA foramen stap-tempor.', 18 PA_pineal_foramen, 19 'JU jugal-squamosal contact', 20 JU_participation_upp._temp._emargination, 21 'JU jugal-quadrate contact', 22 JU_medial_process, 23 QJ_lower_temp._emarg., 24 'QJ qj-maxilla contact', 25 'QJ qj-squamosal contact', 26 'SQ sq-postorbital contact', 27 'SQ sq-supraoccip. contact', 28 SQ_posterolateral_protub., 29 SQ_posterior_process, 30 'SQ sq-qudrate contact', 31 'PO po-palatine contact', 32 postorb._recess, 33 position_notch, 34 ST_supratemporal, 35 PM_apertura_narium_externa, 36 PM_fusion_pm, 37 PM_foramen_prepalatinum, 38 PM_apertue_narium_externa, 39 PM_medial_premax._hook, 40 PL_contribution_braincase_wall, 41 PL_contribution_upp._triturating_surf, 42 PL_secondary_palate, 43 'PL palatine-vomer contact', 44 MX_triturating_surface_definition, 45 MX_accessory_ridges, 46 'VO number of vomer(s)', 47 'VO vomer-pterygoid contact', 48 VO_vomerine_teeth, 49 'VO vo-premaxila contact', 50 VO_ventral_crest, 51 VO_shape_palate_roof, 52 VO_vomerine_pillar, 53 VO_upper_triturating_surface, 54 'QU cavum acustico-jugulare', 55 QU_caum_tympani, 56 QU_precolumellar_fossa, 57 QU_antrum_postoticum, 58 'QU arrangement qu,op,stape, E. tube', 59 QU_proc._trochlerais_oticum, 60 QU_musculatory_facet_of_proc.t.O, 61 'QU qu-basiphenoid', 62 process._epipterygoideus, 63 'EPt absence/presence', 64 parti._F.nervi.Trig., 65 PT_teeth, 66 PT_basipterygpod_process, 67 PT_interpterygoid_vacuity, 68 'PT pt-basioccipital', 69 PT_proces._troch._pteryg, 70 PT_foramen_palat._post., 71 PT_medial_contact, 72 PT_contribution_foram._palat._post., 73 PT_vertical_flange, 74 'PT pterygoid-exoccipital', 75 PT_fossa_podocnemidoidea, 76 PT_proc._pteryg._externus, 77 PT_position_pt_respec_bs, 78 PT_medial_ridge, 79 PT_posterolateral_extension, 80 SO_crista_supraoccip., 81 SO_dorsal_exposure, 82 SO_horizontal_crest, 83 EX_medial_contact, 84 BO_anterior_morphology, 85 'BO deep C-shaped', 86 PR_dorsal_exposure, 87 extent_suture, 88 dors._process, 89 OP_transverse_plane, 90 OP_ventral_ridge, 91 OP_procesus_interfenestralis, 92 OP_parti.form.stap.temp, 93 BS_rostrum_basisphenoidale, 94 BS_paired_of_ventral_pits, 95 BS_ventral_surface_shape, 96 'BS rough surface between bs-bo', 97 BS_dorsum_sellae, 98 BS_foramen_carotic_laterale, 99 BS_foramen_ant._can._car._int, 100 HY_facil_nerve_path, 101 SA_size_of_foramen_stap._temp., 102 SA_position_of_foramen_st._temp, 103 RS_recessus_scalae_tympani, 104 FJ_foramen_jugulare_posterius, 105 'FN foramen nervi hypoglossi (XII)', 106 IC_internal_carotid_artery_splitting, 107 IC_foramen_post._canc._carot._intern., 108 PAr_palatine_artery, 109 FP_fenestra_perilymphatica, 110 CS_cranial_scute_D, 111 CS_cranial_scute_X_vs_D, 112 CS_cranial_scute_X_vs_G, 113 'CS cranial scutes A,B, C', 114 CS_cranial_scute_O, 115 CS_cranial_scute_P, 116 DE_medial_contact, 117 DE_width_triturating_surface, 118 DE_symphyseal_ridge, 119 DE_lingual_ridge, 120 'DE dentary-surangular arrangement', 121 SP_splenial, 122 CA_carapacial_scutes, 123 CA_parallel_keels, 124 'CA+PLA sculpturing of surface', 125 'CA+PLA pattern of sculpturing', 126 CA_carapacial_sutures, 127 NU_nuchal_articulation_with_neural, 128 NU_costiform_process, 129 NU_length_vs_width, 130 NU_posteriomedial_fontanelles, 131 NE_neural_formula, 132 NE_shape_of_neurals, 133 NE_number_of_neurals, 134 PE_peripheral_gutter, 135 PE_number_of_peripherals, 136 PE_anterior_musk_ducts, 137 CO_costals_1_contact, 138 CO_posterior_costals_contact, 139 CO_distal_rib_end, 140 CO_rib_free_peripherals, 141 CO_alternative_lateral_ends, 142 'CO costal 9 abs/pres', 143 CO_shape_of_costal_3, 144 SUP_number_of_suprapygals, 145 SUP__sup1_vs_sup2, 146 'CE cervical abs/pres', 147 PY_pygal_notch, 148 SPR_supramarginals, 149 VE_shape_of_vertebrals, 150 VE_position_of_ver._3_and_4, 151 'VE vertebrals 3-4 sulcus embayment', 152 VE_vertebral_1_anterior_carapace, 153 MA_marginal, 154 PLR_extrapleurals, 155 PLA_connection_with_carapace, 156 PLA_central_plastral_fontanella, 157 PLA_posterior_plastral_fontanella, 158 PLA_plastral_kinesis, 159 PLA_plastral_kinesis_hyop_vs_hypo, 160 'PLA hyo-hypo contact and shape', 161 'EN absence/presence', 162 EN_anterior_process, 163 EN_size_of_posterior_process, 164 EN_distinct_posterolateral_process, 165 EN_shape_in_ventral_view, 166 EN_suture_with_hyop, 167 EPI_shape_and_contacts, 168 EPI_anterior_lip, 169 HYO_ax._buttress_contact, 170 HYO_termination_ax._buttress, 171 'ME absence/presence', 172 ME_medial_contact, 173 HYPO_inguinal_buttress_contact, 174 HYPO_termination_inguinal_buttress, 175 XI_anal_notch, 176 XI_shape_of_xiphiplastron, 177 PLAS_plastral_scutes, 178 PLAS_midline_sulcus, 179 GU_number_of_gulars, 180 EXT_extragulars, 181 EXT_extragulars_medial_contact, 182 EXT_anterior_plastral_tuberosities, 183 EXT_restricted_to_epiplastron, 184 'IN intergular absence/presence', 185 HU_number_of_pairs, 186 'HU humero-pectoral sulcus', 187 'PEC pectorals abs/pres', 188 'PEC anterior-posteriorl developed', 189 'ABD abdominals abs/pres', 190 AN_anal_vs_xiphiplastron, 191 'INF inframarginal absence/presence', 192 CER_cervical_rib_size, 193 CEV_transverse_process, 194 CEV_ventral_keels, 195 CEV_cervicals_8_vs_7, 196 CEV_diapophyses, 197 CEV_central_articulation, 198 CEV__cervical_8_vs_dorsal_cerv._1, 199 CEV_biconvex_middle_neck, 200 'CEV biconvex absence/presence', 201 CEV_biconvex_position, 202 CEV_cervicals_5_and_6, 203 CEV_cervicals_6_and_7_double, 204 CEV_cervicals_6_and_7_central, 205 CEV_cervicals_7_and_8_double, 206 CEV_heigth_vs_lenght, 207 CEV_cervical_8_neural_arch, 208 CEV_postzygapophyses, 209 CEV_cervical_8_ventral_process, 210 CEV_cervicals_7_and_8_shape_art., 211 DR_dorsal_rib_1_length, 212 DR_dorsal_ribs_9_and_10, 213 DR_dorsal_rib_10, 214 DV_dorsal_vert._articulation, 215 CA_tail_club, 216 CA_caudal_centra, 217 CA_anterior_caudal_centra, 218 CA_posterior_caudal_centra, 219 CA_chevrons, 220 CA_caudal_tail_ring, 221 SCA_anterodorsal_ridge, 222 SCA_ventral_ridge, 223 SCA_horizontal_ridge, 224 SCA_glenoid_neck, 225 'SCA lamina between sc/acromion', 226 SCA_internal_angle, 227 COR_coracoid_vs_humerus_lenght, 228 COR_coracoid_foramen, 229 CLE_cleithrum, 230 PEL_pelvis_shell_attachment, 231 PEL_thryoid_fenestra, 232 IL_iliac_neck, 233 IL_iliac_scar, 234 IL_shape_of_articular_site, 235 IL_posterior_notch_in_acetabul., 236 IL_thelial_process, 237 PUP_pubis_lateral_process, 238 PUB_epipubics, 239 ISC_ischium_contact_with_plastron, 240 ISC_metischial_process, 241 'HYS hypoischium absence/presence', 242 HUM_ectepicondylar_foramen, 243 HUM_proximal_articular_surface, 244 HUM_lateral_process, 245 HUM_lateral_proc._visible_dorsal_v., 246 HUM_lateral_process_shape, 247 HUM_expansion_lateral_process, 248 HUM_medial_concavity, 249 HUM_anterior_projection_lateral_proc., 250 HUM_length_vs_width, 251 HUM_scar_for_muscle_latissimus, 252 'HUM-FEM length', 253 ULN_contact_with_radius, 254 RAD_curves_towards_anterior, 255 MAN_phalangeal_formula, 256 MAN_paddles, 257 MAN_flippers, 258 ULNR_ulnare_vs_intermedium, 259 PES_number_of_digits, 260 'MAN-PES flattening of carpals and tarsals', 261 'MAN-PES hyperphalangy', 262 FEM_femoral_trochanters, 263 TIB_tibial_pit ; MATRIX Apalone_spinifera 1--1010011011101201100000100100??11121010001-1112000022022110?1?1221002111020021010100??021?00000000001112120------000001201201000011-3001000103----------11(0 1)0-201114111032-0-001----1---------11010120-0010111000201-111110111020012001--001110111010---1?00010110010? Caretta_caretta 1--1000110000100001002000000010??11010001111-1012002122011210?1?1221020-11010101000110??021?101011100011021?0------010101030-020000110000032010101121100011110-101112111032-0-020001---(0 1)0(0 1)0000011110111200011100012011111110111020112001--00111011120100011110120101020 Carettochelys_insculpta 1--1010011001101201000010100100??11120010000-1112000022022110?1?1221002111020021010100??021?0000???0001112120------00000110120100001102001000100--12------1000-201111011022-01001----1--------?11010110-00101110002011111110111020012001--011110100000---1?00010220000? Chelodina_colliei 011011101111110-20100?1--100001??11000001000-101?0000320230-1?2?12201010-00-0000001100??001?00000??1011122320------10010000130101000?01?12000100-1121-00000000-201111011112-01100010110000000021000111131000010100201011111011112001210111000110111000---1?000100100?0? Chelodina_longicollis 011011101111110-20100?1--100001??11000001000-10110000320230-1?2?12201010-00-0000001100??001?00000001011122320------1001000013010100-201112000100-1121-00000000-201111011112-01100010110000000021000111131000010100201011111011112001210111000110111000---1?00010010000? Chelonia_mydas 1--1000111000100001002000000010??1101010111201010002122011100?1?1221020-11010001000110??021?10101110001102120------002011030-0200(0 1)0120100031010111121100001110-101112111032-0-020001---10(0 1)0000011110111200011100(0 1)12011111110111021112001--00111011120100011110120101?10 Chelonoidis_chilensis 1--1000011001101201000000100000??1100000000201010110022022100?1?12210011100100?1000100??021?00000??0001002120------000001000-010100010100000110102121000000000-201111010002-1?100001-1-0000100111010111210101110102011111110111020012011--0001101(0 1)0010---1?0??00011000? Chelus_fimbriatus 1--010101101010-2010001--100001??11100001000-10100000320230-0?2?12201010-00-0000001100??001?00000001011122320------100100021(0 3)0101000101100000100-1021100000000-201111011112-31100010211001000021011111131000010100201011111011112001210111000110110000---1?00010010000? Chelydra_serpentina 1--10000100011002010010000000001111000100001-1010000022022100111122100011101000100010011021000000010001002120??????00????000-0120000101000200102-1021100001100-(1 2)01112111032-0-010001-1-0010?11011110111200101110102011111200111020012001--00011?110000---1?0001001????? Chrysemys_picta 1--1000011001101201000000100000??1100000000201010000022021100?1?1220001110010001000101??021?000000?0001002120------000001000-0101001101000000100-1021100000000-201111011112-10100001-1-0000100111110111211101110102011111110111020012011--000111110010---1?00010010000? Dermatemys_mawii 1--100001(0 1)001100201000000100000??110000100?201010000022021100?1?1221001110010001000110??021?000000?02-1002120------000001000-0110001101101000100-1121100000000-20111101?112-00100001-1-1001000011110110-0010111010201111??10111020012011--00101?110010---1?000100?0000? Dermochelys_coriacea 1--101001000000-0000100000000100011000000000-101000002201110012-1221021-0003000100010000021010000000001102220------0001112--?020-00---300-----0-----------111-?41-----11032-0-021--------------111101112000110000120-0111110111021112011--0011-0111301001101001202?1?10 Elseya_dentata 011011101101010-0010001--100001??11000001002010110000320230-0?2?12201010-00-00010-0100??001?000000010111?2320------00010000??010100-201?1200010??2121-00000000-20111101?102-1010001001?00?0000210?0111131000010?00201011??101111200121?11100??101??0?0---??0001001???0? Emys_orbicularis 1--1000010001101201000000?00000??1100000?000-1010000022021100?1?1220001110010001000101??021?00000000001002120------000001000-0101001101000000100-10211000010010201011011012?01000001-1-0010000?1111011121010111010201111111?111020012011--00?11?110010---1?00010010000? Eretmochelys_imbricata 1--100011100010000100200000001000110100011121101100212201110011-1221020-1101010100011000021010101110001102110??????000011000-0200(0 1)0120100022010111021100001110-101112111032-0-020001---10(0 1)0000011110111200011100012011111110111021112001--00111011120100011110120101020 Erymnochelys_madagascariensis 1--111001101110-001012000100001??1100000100202111-000321230-1?2?12201010-01-000100010???001?000000010?112--20------000001000-0101001101101000100-2121100000000-001111011101110100010011001000021000111100000010000201011??101110200121011100011?110000---1?00010010000? Testudo_hermanni 1--1000011001101201000000100000??1100000000201010110022022100?1?1221001110010001000101??021?00000??0001002120------000001000-010100010100000110101121100000000-201111010102-00100001-1-0000100111110111210101110102011111110111020012011--000111110010---1?00000011000? Geoclemys_hamiltonii 1--1000010001101201100000100000??11000000000-1010110022021100?1?1221001111010001000101??021?000000?0001002120------000001010-010100110110000010101121100000000-201111010112-11100001-1-0010100111110111210101110102011111110111020012011--000111110010---1?00010010000? Gopherus_polyphemus 1--1000011001101201000000100000??1100000000201010110022022100?1?1221001110010001000100??021?00000000001002120------000001000-010100010100000110101121100000000-201111010102-10100001-1-0000100111110111210101110102011111110111020012011--000111100010---1?00000011000? Kinosternon_flavescens 1--1000010001101201000010100000??11000010000-1010000022021110?1?1221001100010001000100??021?000000?0101?02120------00000101010110001102011000100-1121100000001121---?-11022-01000001-1-11-1-2011111011110???11101021-1111110111020012011--111110110010---1?000100100?0? Lepidochelys_kempii 1--1000111000100001002000000010??11010001111-1010002122011210?1?1221020-11010101000110??021?10101110001102110??????01(0 1)111000-020000120(0 1)00022010111121100011110-101112111032-0-020001---00(0 1)0000011110111200011100012011111110111020112001--00111011120100011110120101020 Lepidochelys_olivacea 1--1000111000100001002000000010??11010001111-1010002122011210?1?1221020-11010101000110??021?10101110001102110??????01(0 1)1110(0 3)0-020000120(0 1)00022010111121100?11110-101112111032-0-020001---00(0 1)0000011110111200011100012011111110111020112001--00111011120100011110120101020 Lissemys_punctata 1--1010?110?1101201100000100100??11121010000-1112000022022110?1?1221002101020021010100??021?0000???0001012120------000001201201000011-3001000103----------1110-201114111032-0-0-1----1---------11010120-0010111000201-11--10111020012001--011110111010---1?0??101?001?? Macroclemys_temminckii 1--1000010001100201001000000000??11000100000-1010000022022100?1?1221001111010001000100??021?00000010001002120??????00????000-0110000101000000100-1011100001100-201112111032-01000001-1-00?0011011110111200101110102011112200111020012001--000011110000---1?000100110?0? Myuchelys_latisternum 011011101101010-0010001--100001??11000001000-10110000320230-0?2?12201010-00-00010-0100??001?01000??1011102320------00010?00??010100-201?12000100-2121-00000000-201111011102-111000100100000000210001111310000100002010111110111120012101110001101?0000---1?0001001???0? Natator_depressus 1--1000011000100001002000000010??11010001111-1010002122011100?1?1221020-11010101000110??021?101011?0001102110??????000111000-020000110100022010111021100001110-101112111032-0-020001---10(0 1)0000011110111200011100012011111110111021112001--0011101112010001?110120101011 Pelodiscus_sinensis 1--1010011011101201100000100100??11?2??10000-1112000022022110?1?1221002011020021010100??021?0000???000111212?------??????201201000011-3001000103----------1110-201114111-32---001--------------110?0120-00?011100020--11??10???????????????????????0??????????????0010? Pelomedusa_subrufa 1--111001101110-201000000100001??1100000100202111-000321230-(0 1)?2?12201010-00-0001000100??001?00000001011102320------000001000-0101001101101000100-2121100000000-001111011111110100010010000000021000111100000010000201011111011102001210111000110110000---1?00010010000? Phrynops_geoffroanus 011011101101010-2010001--100001??11000001000-10110000320230-0?2?12201010-00-0000001100??001?00000001011122320------100100000-0101001111101000100-1121100000000-201111011112-10100010010000000021000111131000010000201011111011112001210111000110110000---1?00010010000? Platysternon_megacephalum 1--1000010001100001001010000000??11000100000-10100?0022022100?1?1221000111010001000100??021?100000?0001002120------000001000-010000010110000010101021100001000-201111011032-02100001-1-0000000011010111210101110002011111200111020012001--000111100000---1?000100100?0? Staurotypus_triporcatus 1--1000010001101201100010100000??11000110000-1010000022021110?1?1221001100010001000100??021?000000?0101002120------0000010201011000110210(0 1)000100-11211?00000011201111111022-01010001-1-00-1-201111101111001011101021-1111?10111020012001--111010110010---1?0001001???0? Sternotherus_odoratus 1--1000010001101201000010100000??11000010000-1010000022021110?1?1221001110010001000100??021?000000?0101002120------00000101010110001102111000100-1121100000001121---?-11022-01000001-1-11-1-201111101111001011101021-1111110111020012011--111010110010---1?00010010000? Trachemys_scripta 1--1000011000101201000000100000??1100000000211010000022021100?1?1221001110010001000101??021?000000?0001002120------000001000-0101001101000001100-1021100000000-201111011112-10100001-1-0000000111?-0--1211101110??2011--??-0-???2?0?-011--000111110010---1?00010010000? Podocnemis_expansa 1--111001101110-001000000100001??11000001002121110000321230-1?2?12201011-01-0001000100??001?0000000101112--20------00000100(0 1)30101001101101000100-2121100000000-00111101111111010001001(0 1)001000021000111100000010000201011111011112001210111000110111000---1?00010010000? Odontochelys_semitestacea 0000??0??0000?0-00?0??0??0?000???00??00?-0?--??0????00000?0-0???00000?1??00?-??00-?00?????????00??????0-???????????00????----0----0000--------0-----------1000-000??000?--00--00???????????????000?00--------?00??----10000000?00000-01?--??00??0??000---1?0??1000?01?? Proganochelys_quenstedti 0000?00?0000000-000000000000000??00000000001-00000100000000-0???000000100000-0000-0001??000?000000?0?00-0000001110000000000(0 1)0000?0?000000000??0??-000-00?00000-00000000?0?100?0000000010000000?010000--------000000000000000000000000010--00000?000000---0?00000000000? Adocus_beatus 1--1000?110?110120100?000100100??1100001000211010000022021110?1?122100111101?0010101?0??021?000????0001112110??????000?0?000-0101011101?0(0 1)00010??1121100100000-201111011002-00000100010001010001111?100-00101110102?111?????111020012011--010111100010---1?0??1001????? Annemys_levensis 00?1??0?110??10020100?000000000??11000000--0-1?10000?22021100?1?112000101?010001000000??021??00?????00?101?10011?0?000001000-010000111110100010101121010101000-201111011002-0000010001000000010???????????????????0?00??????1110200110?1--?0?????00000---1?0??????????? Araripemys_barretoi 1--1??0?1101110-201102000100001??110000?0001-?11??0003212?0-0?2?12201020-00-000???0100??001???00????01110232???????10??0101140101001101001200100-2121101001110-001111111112-01100011---00000102100?1111000000101002??0111110111?200121??????????11?000---1?0??10010000? Archelon_ischyros 1--0??0010000?0?001010000?00010??110?0?00001-1110000022021??0?1?1221020-?1030111000100??021??000????001?0211???????000101230-0100001201000200000--1----0--1110-301113121032-0-021--------------111?011?????????0??201?111110111021112001--0011101112001101111112020101? Baena_arenosa ???0002?11010100001000000000000??11000000001-1010000022021100?2?12210010100100000-011???021?0000???00?11?2221??????0000010013?101001101?000001?0-0-21100000000-00111101?11101?00000021100000010?10?10--------000?01010112200111020012011--000011100000---1?0?????????0? Baptemys_wyomingensis 1--1000?110?1100201000000100000??11000010002?1010000022021100?1?1221001(0 1)?001?0010001?0??021??00????02-1?02120------00??01010-0110001101?0000010??1121100000000-201111011112-1?000001-1-0011000011?1?111???????????2?1111??1?111020?12011--1???1?1??????????0??1001????? Boremys_pulchra 0010002?11011100101000000000000??11000000?0??101?0???22021100?2?12210011?00?00000001?0??021?0000???0001??2221------00000000130100001101?0000010100-21100000000-00111101?1?101??0000021?000000?0010010--------?????1010112100???????120??--????????????????????????????? Bouliachelys_suteri 001(0 1)?0001000110000100000?0??0?0??11110000001-11100?0022021210?1?1221010111010111000100??021?1000001?001102110??????001101?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? Chisternon_undatum 001000201101010?101000000000000??11000000001-1010000022021100?2?122100111001000000011???021?0000???0001102221------00000100??0100001101?0000010??0?21-?0?00000-00111101?1?101?00000021100000010?000?1112?0000??0?0101011??00????2????011--0000111?0000---1?0?????????0? Desmatochelys_padillaii 0010??001100110001101000000001???110?0?0?0???1110???022021210???1??1010111010111000100??021??000????00110211???????00??0?000-010000110?00?2?0?0??1?2???0001????????????????????????????????????11110111200000100002?10??????1110211??????????????112001101??11?202?1??? Desmatochelys_lowi 0010001?110011000010000010000101111000000001-11100000220112100101221010111010011000?0011021100001?1?0-1122?1???????001101000-010010110?00020010??1?2?100001110-301112111032-0-0000?????????????1111011120??0010000201???????1110211120?1--001110111200110101111202?1?1? Dracochelys_bicuspis ????0???110??10??0??01000?000????110000?00?1-10100000220{1 2}1100?1?112100101101000?0?010???021??000???0001?0111?------00000100??1100001101?00100111020?1101?01100-20???211?002-00000??????????????0111?110-000001000?0010?????01110200??0???????????0?000---1?0???00?????? Emarginachelys_cretacea 1--1000?11??1100?0100?0001000?0??1100001?????1010???0220211???1?122100111?????010?01????021?00?????00????????------??????01??011??0??01?0000?10????21100001000-201111?1?0?2-0?000001-1-00???10?11???111?????????????1???????11102????0?1--01????1??????????0??100?????? Glyptops_plicatulus 01100?1?1101?1??0010010?0??00????110?0100001-1?1??000220211?0?1?1121001010010000?-?01???021?0000???000112201?------00000000100100001101?0000010101120100100000-00111101111101000000001000000000?00010--------??0?0001010???01111200110?1--00??1?100000---1?0??????????? Judithemys_sukhanovi ???1??0?1101?10?101001000000000??11???0??00??101?0000220211?0???12210010?101000100000???021?0100???000110111???????00000?000?0100001101?0000010101?21100001000-20111211?002-00000001-1?000000(0 1)0?111011120(0 1)0001(0 1)0102?101112101110200?20?1--00??1?100000---1?0??100?00?0? Kallokibotion_bajazidi 00?0??0?1?0?01?00?100?0000?000???100?000?00??111?1??022023100?1?1121??1??00?100100?011???1??0000????00110001?????????????000-00000011??0000001011?1?00?000?000-001?1101??011?200000001000?00000?00000--------0?0???????0--00111010011011--0000???00000---0????????????? Kayentachelys_aprix 001000101100000-001000000000000???10?0000001-10100000120110-0?0?01000010000100000-0010??012?010000??000-00000??????100000000-000000000(0 1)100000000-1120000001000-00001000?001000000000010000000000?0?00--------??00000001?00001010?0011011--00001?10?000---??????00????0? Kirgizemys_hoburensis 0011000?110?0100101001000000000??11000000000-1010000022?21100?1?112{0 1}0010100100010000?0??021?0100???000100111?-???????????000-0100001111?0000010??1121100001000-201112111002-0?000001-1?000000(0 1)0?111?111200000110??2?10?1????????2???20?1?????????0?000---1????????????? Meiolania_platyceps 0000000010000100001000001012000??1100000000211010110022003100?0?1211001(0 1)00001001100010??011?00000??1001(0 1)00100111111000000000-?0000???0100000?1???1020?00101100-00101001?012-0000000001000??????010001112000000000000?0012201111000011011--00001??00000---0?00000010000? Mesodermochelys_undulatus ???????1???????????????????????????????????????????????????????????????????????10??????????????????????????????????002011100-02000011?10002?0100-?12??00--1110-10111211?032-0-021--------------11100111200000000002010111110111021112011--0011101112010011010??202?1?1? Ordosemys_leios 0???????110??10?{1 2}???01?00???????????????0??0-?????????2??111????11???0?0?????00??????????????10?????0???0????????????????000-010000111110000010101?2010000111?-10???????002-000000???1??0?0?0(0 1)0011?0111210000?00??0??01112101110200??001--000?1?10?000---1?0??????????? Ordosemys_skull 0010000?????????1?10??0?0?000?0??1100000???0-1?1000?02202?1?0?1??1210010110?0???0?00?0??021??100???0001101?1???????????????????????????????????????????????????????????????????????????????????????????????????0??????????????????????????????????????????????????????? Palaeochersis_talampayensis 0000?00?000?001-0?10??000000000??000?000?000-0?1?0??0110000-0???1100001000000?000-000???110??000??????0-00?0???????00??00000-0?0?????0?0??00??0??-0???????00?0-?0001000?0???0?0?00???0???????0?110000--------0000000?0100000000000000110???000??00?000---1?0??0000?000? Plesiobaena_antiqua 0010002?11011100101000000000000??11000000000-1010000022021100?2?122100101001000000011???021?0000???00011?2221------??????00130100001101?00000(0 1)0??1-21100000000-00111101?1?101?00000021?000000100000?11????????????101010??001111?0???0?1--0???1?1?????????????100?????? Plesiochelys_etalloni 001100001100(0 1)1001010000000000?0??11000000001-10100?0022021100?1?12210110100100010001?0??011?0000???000??02120??????000000000?0100001101?0020010100020100000(0 1)00-00111101?1?2-1000000001000000000???????????????????0010??????1110?????0?1--0?????1??000---10?00100?????? Pleurosternon_bullockii 0110??1?1100110?00100100000000???1100000??00-1?10????220211?0?1?112?00101?0100??0?0?????011?0000????0????2011------??????00130?00?01101?00000100-2120100100000-001??101??110100000100100000000000???0--------??0?000?????????????????0?1--00??????????????????????????? Protostega_gigas 1--0??001000??0?0010100000?0??0??110?0?00001-1110000022021210???1?2102?-11030111000100??021??000????001?0211???????000100230-0100001101000200000--1----0--1110-301113121032-0-021--------------111?011120????100002010111110111021112001--0011101112001101111112020101? Puppigerus_camperi 1--1??0011000?00001002000000010??11010001111-10100?2122021100?1?12?1020-11030101000110??021??01011??00110211???????011101000-010000110100021010111121100001110-101112111032-0-02000?????????00?1111011120001110001201???????1110211120???????????1120000010110?201?1?11 Rhinochelys_nammourensis 0010??0011001?0?001???000000?????1?0?0??????????????????2???????????0???1??????100???????????????????????????????????????230-0100001101?00200000-???1100?01110-301112111032-0-02???????????????????????????????????01????????????????0???????????1?200???1?1111202?1??? Santanachelys_gaffneyi 0010000?1100110?0010120000000?0??110?0001001-1110000022021100???12210100?00100110?01????02???00????00?1?022????????00??01000?0?00001101?00200100-?020000?01100-30111211?012-0?00?0?????????????11???????????0?????0?1?1?????111021???0??--0???1?1??2?0---?01011102?1??? Sinemys_lens 0010??1?11011100201001000?0000???11??00????0-???????022{0 1}22100???1?200010?00100010??000??021??100???0001?0111?------00000100??010000110110020010102-21101001(0 1)00-201112101002-000100???1??0?000?0?1?0?????0?????????0???1??????????????0????????????????????????100?000?? Solnhofia_parsonsi 0011000?1101(0 1)100101000000?00000??11000000100-1110--0022021100?1?1221001001020001000110??021?0000???0001102120??????011100000-0??0?01101?00200102-1?20100?01100-10???111?002-000000??????000?00?110?00--------???????1?10????111020???0??--??0?1?1??000---1?0?0100?0000? Jurassichelon_oleronensis 0010001?110?010010100?000000000??1100000?001-1110000022021100?1?12210110?10100?00001?1??021?000????0001102120????????????00??010000110??0????10????????0???1?0-1????1?1?102-????00??????0?0?0??11??00--------0?0??1???????????????????????????1???????????????????????? Toxochelys_latiremis 1011000011011100101000000000010??11000001010-1010001022021100???1221000011010101000100??021?0010001000110212?------00(0 1)101000-0200101101000200101111211000011(0 1)0-101112111032-0-0200???1??0???01011?10111200??0????1?01011??001110?00??00?--0???111??100---?0110110??1?00 Trinitichelys_hiatti 0010002?1101110?101001000000000??11000000000-101?00002202110??2?122100101001000000010???021?0000???0001102221------0000000013010?00110??0?00?10??1121100?00000-00111101?1?101??00000011000000?0??00?0--------???????10???????????????0????????????????????????????????? Xinjiangchelys_radiplicatoides 01?0??1?1101?100{1 2}??0??????0??????11??0?0????????????0220?1100?1?11200?????0?0???000000??02???00????000?12?21?????????????000-010000??11?0000010101121100???000-201?11011002-0000010001000000010???????????????????0?????????111?20011????????????00000---1????????????? Xinjiangchelys_wusu 0110?01011010?0020100?000000000??110?00??--??1?1?0?0022021100???11200010110100?1000000??021??00?????00?12111?011???00??01000-0??000111110(0 1)00010101121100101000-201?11011002-000000000100000001000???0?-------1?0?????????????????????????????????0?000---1?0??10000000? Annemys_latiens 01?0??1?1101?1002010?0?0??0??????11????0????????????02???1100?1?11200?1???0?0???0???00??02???00?????00?????1?????????????000-0100001111?0(0 1)00010101121(0 1)10101000-201111011002-0000010001000000010??????????????????????????????????????0??--???????00000---1?0??????????? Basilochelys_macrobios ?????????????1002??????????????????????0?????101?0???2????110?1?11200?1??10?000????010??0????100????00??2111?????????????001?0??0011111?0?0?010??1?211001?0000-20111101?0{0 1}2-??000????1??01???0??11??0--------1?0??0??1???????????????011--?001??1?????????????????????? Changmachelys_bohlini ???1??0?110?0???1?100?000000000??11?????0??0-????????22021??0???1???00?01?0?000100?0?0??02???100???0001?0??1?????????????000-0?00?01111?0000010?01?21??0?01??0-201?121??002-0000????????????????11??1???0???01?0??????1????0????2????0?1--?????????0?????1????100?000?? Eileanchelys_waldmani 00000?1?110?0?0-0?100?0000?0000???10000??0???1?1000001202?0-0???1??00????00?0??0?-?000??011??100????00110????????????????0?0-0??0000111?0000010101?20000????00-001??00????????0?0?00???00?0???0???????????????????????????????????????????????????????????????????????? Chubutemys_copelloi ???00000100?010?00?00?00?00?00???11??????00??11100000120211?0???112000100000?001?-?00???011?0000??????1100???????????????0???0???????0??0?????0????????0???????????????????????????????????????????1?1?????????0?????0??????1110?0????????????????????????????????????? Liaochelys_jianchangensis 0011??0?110?1?002?10?????0000????110?0????????????????????10?????????0?????????100???0??0???????????00???????????????????000?1?????1?(0 1)1?011?011101?201?00?1110-20???211???2-0?010??????????????011??1????????1?0??????11???0???????????????????????????????????????0??? Manchurochelys_manchoukuoensis ???1??0?110?1?002010??????0000???110??00?0???101?0??02????100???11210?10?1010??10000?0??0????100????00?10221?------??????000-0??0001111?0020010101121100001?0??????????????????0????????????????11??1?0-0????1?0??????1?1200????2????????????????0?0?????1?????????0?0? Otwayemys_cunicularius ????????????????(0 1)??????????????????????????0-???????????2?1??????????????????????-???????????????????0?????????????00010000????0???????00?0?0??????20?????1100-00111101?112-02000000010000001?000??011??10???000?01??0?12?0???????????????????????????????????????????? Plastomenus_aff._thomassii 1--10?0?110?110120110?000100?0???11----?0000-1112000022022110?1?1221002111020021010100??021??000????00101212?------00??0?201201000011-3001000103----------1010-2???????1-32---??1--------------???????????????????20??????????????????????????????????????????????????? Sinemys_brevispinus ????????????????????????0?0000???1????0??????????????2212?100???11?0?????00?0???0?00?0??021??100????001?0??1???????????????1?0?00????0??0?2?0?0??2?2???1???110?2?11121????2?0001?0???1??0?0001?1????1?0-?????1?0???????112??????2???20????????????1000---1????????????? Stylemys_nebrascensis 1--1??0?110?110?20100000010000???11??????0?????1??????202?1?0???122?0???1?0?????????????0?????0???????????12?????????????000-0?0?00?10100000010101121100000000-201111011112-2?100001-1-00001001?????????????????????????????11102????01?--??0011110010---1?0??00010000? Xenochelys_formosa 1--10?0?100??1012?????????00??????10?01?0000-1?10??002????1?0?1?122?021-???10????????0???????00?????10????12?------??????010-01?1001102101000100-1121100000000-201111011022-01100001-1-00-1-201???????????????????????????????????????????????????????????????????????? Adocus_amtgai 1--1??0011001?0100100?000000000??11000000?00-101?0?0022021100???1??1001111010001000??0??021??000????001???11???????000001??????????????????????????????????????????????????????????????????????111?011?????0?110????????????1110200??????????????10000---1?0???0??????? Alienochelys_selloumi 0010??101001??00001000010000000??11110001000-10100?00220210-0???1??1020-?101001000?000??02??1000?????????2???------000101?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? Allopleuron_hoffmanni 1--1000010001?00001000000000010??11000000101-10100?0022021210???1?21000111010101000110??021?1010111?00110211???????001101230-01000011010002001011-021100001110-101112111032-0-021--------------11110111200011100012010111110111021112001--0011101112000001011012010101? Angolachelys_mbaxi 1--1?00011010?00101002000000000??110?0000000-101?000022021100???1??00?1?1?02000?0?010???021??000??????1?02?1??????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? Argillochelys_africana 1--1??0011000?00001002000000010??11010001111-10100?2122021100???1221020-?101010100?110??021??010????001?02110??????010101?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? Argillochelys_cuneiceps 1--1??001100??0?001?0000?0000????11010001111-101000?1220?1100???1??1020-1101010100?11?????????10??????1??2?????????????????????????????????????????????????????????????????????????????????????1111011120001110001?010????????????????????????????????????????????????? Ashleychelys_palmeri 1--1??0011000?00001000000000000??110100001?1-1010002122021100???1??1020-?101010100?11???021??010??????1??2???????????????000-0?00001101?00210101111201000011100101????1?032-0-02????????????????????????????????????????????1110211???????????????????????????????????? Australochelys_africanus ????????0???0?1-00?00?0?00?0?0????0??00?00?1-?0??01?0110000-0????1000010?00?0000?-??????110??00???????0-0??0??????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? Basilemys_variolosa 1--1??0?11??1?0??0100?000100?00??110?00????????1??????20?21?????122?0???????????????????0??????????????????????????00????00120101011101?0(0 1)000100-1?211001?0000-2011110110?2-0?000100(0 2)110010000111?1?1?0-0??????????????????????????12011--00011?1?????????????000?000?? Brachyopsemys_tingitana 1--1?00011010100?01001000000000??11110000000-1012000022021200???1?21000110020001000100??021??000????00100211???????010101?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? Calcarichelys_gemma 1--1??????0???00???????0?000?????1?01000?????1???0???22021210???1??10?0??1?30111000110??02??1?001?????1??????????????????030-?1000011?10002001?0-1?2110?0011?0-301112111032-0-020001---?0?000?????????????????????201????????????????0????????1???????????????????????? Carolinochelys_wilsoni 1--1??0011000?00001000000000000??110100000?1-101000?122021100???1??0020-11010?0100010???0????010??????1??2???????????????000-0?00001101?00?00101111211000011100101????1?032-0-02???????????????111??1?????11?1???1??????????1110211??????????????112000001????????????? Chelonoidis_gringorum ?????????????????????0????????????????????0???????????????????????????????????0???????????????????????????1??????????????000-0??100010100000110102101100000000-201111010??2-??100001-1-00001001??????????????????????????????????????01??????????1?0?????1????????????? Chelosphargis_advena 0011??0?11001?0?00100?000000??0??110?00??????1???????22021??????1??????????????????????????????????????????????????011101030-?100001??10002001?11?02110?0?11?00301112111032-0-02?????????????????????????????????????????????????????0????????????????????????????????? Chengyuchelys ?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????000-0?0000?11??0000010??0121010101000-201?1101?0010????0000000000000?0???????????????????????????????????????????????????????????????????????? Chitracephalus_dumonii ?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????021001000???0????20??0???1????0??11?0-1011110110?2-0?0000?????????????111?00?0-???????0??2???1???1??????????0?1--0001101??000---1?0???00?????? Condorchelys_antiqua ??????????????0-0??????????000???????????????????????120?10-0???11000?1?000(0 1)0?0??-?01???012??100??????0-0000?????????????000-0?????010?1?00000010?0?0000???1?0-?0001000?????????0???????0?0????010?00?-??----0?000?0??1?00?01110?0???01????0001?100000---?????????????? Corsochelys_haliniches ???1?????10?1?0000???????00001???????????????????????22021100?1???210????1010??1000100??021?1000????001?02?????????????????????????????????????????????????????????????????????????????????????1111011120001110001??????????1110210????1--0011?0111200000?0?10?20??1??? Ctenochelys_stenoporus 1--10?001100?10000100200?0??0???????10001100-10100?0022021210???1??1000111010101000110??021?101011??001?2??????????001101030-010010110100020010111121100001110-101112111032-0-020001---?00000?0111101?120001110001201???????1110211120??--???????1120000010110?201?1??? Dinochelys_whitei 0?10??1?1101??0?00100?0000?00?????10?01???0???????0???20?11???????2???????0?000?????????0???0???????0??????????????00000000130??0?01101?0000010101120100100000-00111101??0???0000000010000000(0 1)200???0--------?????0?1?1????????????110????????????????????????100?????? Dorsetochelys_delairi 0010001?110?010?00100100000000???110?00?0000-10100??0220211?0?1?12210010100100000-000???011??100????0?110202?------???????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? Echmatemys_wyomingensis ?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????000-0101001101?0000010?-1121100000000-201111011102-11100001-1-00100001???????????????????201???????1110???120?1--?0??????????????????????????? Eochelone_brabantica 1--1??0011000?000010020000000????110100000?0-10100?1022021100???1??1020-11010101000110??021??01001????1?0211?????????????000-0?0000110100021010111021100001110-10111211?032-0-02000???????????????????????????????201???????111021112001-???11101112000001?110?201?1?11 Erquelinnesia_gosseleti 1--1??0011010?000010000000000????111100001?1-10100?2122021210???1?21020-1103000?00?110??021??010????001?0211???????000???000-0?0010110100021010111021100001110-101112111032-0-02000???????????????????????????????201???????111021112001-???11101112000001?110?201?1?11 Euclastes_acutirostris 1--100001101??00?010020000000?0??11010001111-10100?2122021210?1?1221020-11010101000110??021??010??????110211??????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? Euclastes_platyops ??????????????00?0100????000??0??11010001111-10100?21220211???1?1??1020-???????100?1??????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? Euclastes_wielandi 1--100001101??00?0100?0000000?0??11010001111-10100?2122021210?1?12?1020-?1010101000110??021?1010????001???11???????0101???????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? Heckerochelys_romani 0??00???110?0?0-?????????0??0?????1??????????1?1?????12??1??0???11000?1?10010?00?-??1???011?0?00??????110000?????????????000-0000000?0?10?000?01011?0??0001100-?011020??00100000000001000000000?????0--------????????0?????01110?00110??--????1?1?????????????????????? Helochelydra_nopcsai 00100?1?1100010000100?010000?00??110000000?0-?????0??22021100???1??10???10000000000000??021?1000????00111211?------000001??15???0?????????????????????????????????????????????00????????????????????????????????????????????111?20????????????????00?0---1????????????? Hoplochelys_crassa ?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????020-011??0?101?0000?10??1121100000000-201111010002-0?000001-1-00-1-100???????????????????201???????111020012?????????????????????????????????? Hoyasemys_jimenezi ???????????????????????????????????0??0?????????????????????????1??10????00?00??????????????1000????????0??????????00???100100?00001101?0?200?0111?211?0?01100000111000?1?2-110000???????????0?11?????????????????????11??1??????????00???????11???00?---??0?01??000??? Indochelys_spatulata ?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????000-0??000010??000001010??20000?0???0-000??000???10??000????1????????????????????????????????????????????????????????????????????????????????? Itilochelys_rasstrigin 1--100001100?1000010020000000?0??11010?01111-10100?2122021100???1??1020-1?010001000100??021??010????001102?1???????010101??????????????????????????????????????????????????????????????????????111?01112?????100?????????????????????????????????112000001???????????1? Lophochelys ?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????030-?1001011???002(0 1)01?11?12110??011?00101????11032-0-02?????????????????????????????????????????????????????0????????????????????????????????? Macroclemys_schmidti 1??1??001000110020100100000000???110?01?0000-1010000022024100?1?1221001?11010001000100??02???00000??00100212???????000001?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? Mexichelys_coahuilaensis 1--1?0001101??00001001000?000????110?0?011???10100?2122021100???1??1020-11010?01000100??021??00000????1?0211???????010???000-?11?0??????0?2?0?????12????0?11?0-3??????????2-?????????????????????????????????????????????????????????001-??????01????????????????????10 Mongolemys_elegans 1--(0 1)00001101110?201000000000000??1100000000201010000022021100?1?12210010100100010??000??021?00000??0001?01110------000001000-010100?10100000?10??1121100000000-20111101?102-10100001-1-00?00000?????111210101110102?111???001110200120?1--0???1?1??????????0??100?????? Mongolochelys_efremovi 0010000?100001000010?1000011000??1100000000211010110012021100?0?11200010{0 1}0001001100011??011??001????00110001000000000????000-0000000001?000?0000-1020100001100-00101001?00??0000000001000000000000001111100000000000001112001010100110?1--000????00000---1?0??100?000?? Neurankylus_eximius ???0??1??10??1?01?????????000?0??1???????????????????220?1100?2?12210?1??00?0000000100???21?0000???00011??221????????????00130100001101?0000010101021100100000-00111101?1?101??0000001000000000???????????????????101????????????????0??--????????????????????????????? Nichollsemys_bareri 1--1??1?1101110??011010000000?0??110?000?001-1010000022021100?1?1221000111010111000110??021?10100??0001?02110??????00?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? Ninjemys_oweni 0???????1?????0?00?0???????20?????1??00?00?211?101100?2??????????????0?????????1?0???????????????????????????110011???????????????????????????????????????????????????????????????????????????????????????????????????0????1??????????????????????????????????????????? Niolamia_argentina 0000000?10000?000010000010120?0??110?0000001-101011002200?100?(0 1)?1211001?00001001100010??01???000???1?01?0?10?00001000??000?0-?????????????????????????????????????????????????????????????????????????????????????????0????1??????????????????????????????????????????? Notoemys_laticentralis ???????????????-???????????000???????????????????????3202?0-0????2?0?????00?00????0100???01??000????00110232?????????????000-010000010100000010101120000000110-0011?101?1111?010001001100000002110?11?-------1?0??201??????0??????0??1??11?0???????000---1?0?????1???0? Notoemys_oxfordiensis ?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????00??0??0000???0??000?0????2??????01?0-0011?10??111111??00??????00000?21????1????----??0???0???????0?????????11?10?000?????0?????1????????????? Notoemys_zapatocaensis ?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????010-010000010100000010101020000000100-00111101111111010001001100000002???????????????????2010?????????????1211111????1???????????????????????? Ocepechelon_bouyai 0010?010110101000010000?0000000??11110000000-111?0000220210-0?1?1221020-100100100?010???021??000????00112211??????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? Pacifichelys_spp. 1--1?00011000?0000100?0000000????110100011?1-10100?11220?1100???1??1020-1?0?01?100?110??021??0101???001?0??1???????01??????0-?1000?????????????????????????????????????????????????????????????111?01??????1?100????????????1110211??????????????112000001?11?????????? Patagoniaemys_gasparinae ?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????000-?0000?0????0?0?0????1??0?????11?0-0????????0???0???0???????0?00???010?01112100000?0??1??0112100?????????0?1--000???1?????????????????????? Peligrochelys_walshae ???0?????00????0???????????1?0?????????????1-?????????20?1100?(0 1)??220?????0??1??1???010??011??001???100110??1?????00???????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? Platychelys_oberndorferi ?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????01100100000101100000100-1010000000110-00111101?11111110001001100000002110??11???----1?0??0010?????0?????????1110000?11???????????????????????? Portlandemys_macdowelli 00110000110??1001????0????00000??11000000001-1010000022021100?1?122100101101000???0100??011?0000??10001102120??????001000?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? Prochelidella_cerrobarcinae ?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????000-0??1?01?01001000100-1121100001000-201111011??????10001001000000002????????????????????????????????????????????0??????????????????????????? Procolpochelys_grandaeva 1--1??0?11000?00001000000000000??110100000?1-10100?11220????0???1???020-?1010??100?11???0????010??????1?02???????????????000-0?00001?0??0?2???0????21??0????1?????????????????????????????????????????????????????????????????????????????????????????????????????????? Proterochersis_robusta ?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????000-0???????000??00??0??-010?00?00000-00001000?0?0?0?10000000000000000????????????????????????????????????001?1??000?0???????????????????????? Protochelydra_zangerli 1--10?0?10?0110???10010000000?0??110000???0??101????0220?21?????12210011????00010?0?????0????0?????00????21?0????????????????0???????0????0???0????????0001000-201112?1?0?2-0-0000?1-1-00?0?110????????????????????????????????????120?1--0???????????????????????????? Rhinochelys_pulchriceps ?010??001100110??010100000000?0??110?0?00001-1110000022021210???1??101011101011100?100??021??000????001?02?1?????????????230-?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? Rhinochelys_sp. 0010??0011001?0?00101?000000010??11000000001-11100?0022021210???1??10101?1010111000100??021??000????001?0211??????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? Sandownia_harrisi 1--10?101100?100001002000000000??110100001?1-10100021220210-0???1??1022-10000000000000??021?1000????00111211?------000101?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? Shachemys_laosiana 1--1??0?110?1?01(1 2)?????????00?????11?????????????????02??????????12210011??0?0??????101??0????000?????0???212?????????????000-0??100-301?(0 1)2000100-2120-?0001000-20111101?002-0100000001000100000???????????????????????1???????????????????????????????????????????????? Siamochelys_peninsularis ?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????001?0?0000111110000010101?21??00?1000-201?1101??12-01000100010000000?0???????????????????????????????????????????????????????????????????????? Sinemys_gamera 0110??1?1101110020100???0000??0??11?????0??0-????????2212?100?1?1120001?100?00010??0?0??021??100???000100??1?------??????001?0?????1???1002?010????2?10???1????2??????01?0??00??0????1??????0????????????????????????????????????????????????????0000????1????????????? Syllomus_aegyptiacus 1--1??0??0001?0??01???00?000?1???????????????????????22021??0???12210???110???????000???0???1000????00?????????????0010010313010000110??002?0(0 1)0???1211000011100??1??????032-0-0200?????????????11?1011????????0001???????????????????0?????0?????1130100010???????????? Tasbacka_aldabergeni 1--1?00011001?00011002000000?10??11010001111-10100?2122021210?1?1??1020-1101010100?010??021?1010????00???2???------011101000-010000110?000200101110211000011100101112111032-0-02000??????0?????11??01??????????0??????1?????1110211??0???????????112000001????????????? Tasbacka_ouledabdounensis 1--1?00011000?0000100200000001???11010001111-10100?2122021210?1?1221020-11010101000110??021??010????00110211???????011101?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? Terlinguachelys_fischbecki ???????????????????????????????????????????????????????????????????????????????????????????????????????????????????0000010?0-?1000?1???0??????????0???????11?00101??????032-0-020???????????????????????????????????????????1111211??????????????112000001?1?012?0?1?1? Warkalania_carinaminor ????????????????0?????????????????????????????????????20031??????????????????????????????????????????????????1110?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????? Xinjiangchelys_junggarensis ?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????00??010000111110000010101121100101000-201111011002-0000010001000000010?10010--------1????000011??00111?20?110?1--0?????1?????????????????????? Yaminuechelys_maior 0?1?????110?0?0-20????????1000???1????0??0????????0?0?????0-?????22?????-00-00?000?10???00???000??????11??32?------100???00130100001101?01000100-1121100001100-20111101111111010001001000000002100?11113100001010020101????0111?2001?1??01??????1??0?????????0????????? Yehguia_tatsuensis ?????????????????????????????????????????????????????????????????????????????????????????????????????????????????????????00120?????1111???000100-??2???0100000-20111101???2-??00010001000000000??????????????????????????????????????0?????????11?????????????????????? ; END; BEGIN TREES; Title 'Trees from "SupInf2A.txt"'; ID 015fba48dc441; LINK Taxa = Taxa; TRANSLATE [0] 6 Apalone_spinifera, [1] 19 Caretta_caretta, [2] 27 Carettochelys_insculpta, [3] 52 Chelodina_colliei, [4] 40 Chelodina_longicollis, [5] 80 Chelonia_mydas, [6] 85 Chelonoidis_chilensis, [7] 104 Chelus_fimbriatus, [8] 112 Chelydra_serpentina, [9] 134 Chrysemys_picta, [10] 140 Dermatemys_mawii, [11] 150 Dermochelys_coriacea, [12] 1 Elseya_dentata, [13] 2 Emys_orbicularis, [14] 3 Eretmochelys_imbricata, [15] 4 Erymnochelys_madagascariensis, [16] 5 Testudo_hermanni, [17] 7 Geoclemys_hamiltonii, [18] 9 Gopherus_polyphemus, [19] 10 Kinosternon_flavescens, [20] 11 Lepidochelys_kempii, [21] 12 Lepidochelys_olivacea, [22] 13 Lissemys_punctata, [23] t24t Macroclemys_temminckii, [24] 15 Myuchelys_latisternum, [25] 16 Natator_depressus, [26] 17 Pelodiscus_sinensis, [27] 18 Pelomedusa_subrufa, [28] 20 Phrynops_geoffroanus, [29] 21 Platysternon_megacephalum, [30] 22 Staurotypus_triporcatus, [31] 23 Sternotherus_odoratus, [32] 24 Trachemys_scripta, [33] 25 Podocnemis_expansa, [34] 26 Odontochelys_semitestacea, [35] 28 Proganochelys_quenstedti, [36] 29 Adocus_beatus, [37] 30 Annemys_levensis, [38] 31 Araripemys_barretoi, [39] 32 Archelon_ischyros, [40] 33 Baena_arenosa, [41] 34 Baptemys_wyomingensis, [42] 35 Boremys_pulchra, [43] 36 Bouliachelys_suteri, [44] 37 Chisternon_undatum, [45] 38 Desmatochelys_padillaii, [46] 39 Desmatochelys_lowi, [47] 41 Dracochelys_bicuspis, [48] 42 Emarginachelys_cretacea, [49] 43 Glyptops_plicatulus, [50] 44 Judithemys_sukhanovi, [51] 45 Kallokibotion_bajazidi, [52] 46 Kayentachelys_aprix, [53] 47 Kirgizemys_hoburensis, [54] 48 Meiolania_platyceps, [55] 49 Mesodermochelys_undulatus, [56] 50 Ordosemys_leios, [57] 51 Ordosemys_skull, [58] 53 Palaeochersis_talampayensis, [59] 54 Plesiobaena_antiqua, [60] 55 Plesiochelys_etalloni, [61] 56 Pleurosternon_bullockii, [62] 57 Protostega_gigas, [63] 58 Puppigerus_camperi, [64] 59 Rhinochelys_nammourensis, [65] 60 Santanachelys_gaffneyi, [66] 61 Sinemys_lens, [67] 62 Solnhofia_parsonsi, [68] 63 Jurassichelon_oleronensis, [69] 64 Toxochelys_latiremis, [70] 65 Trinitichelys_hiatti, [71] 66 Xinjiangchelys_radiplicatoides, [72] 67 Xinjiangchelys_wusu, [73] 68 Annemys_latiens, [74] 69 Basilochelys_macrobios, [75] 70 Changmachelys_bohlini, [76] 71 Eileanchelys_waldmani, [77] 72 Chubutemys_copelloi, [78] 73 Liaochelys_jianchangensis, [79] 74 Manchurochelys_manchoukuoensis, [80] 75 Otwayemys_cunicularius, [81] 76 Plastomenus_aff._thomassii, [82] 77 Sinemys_brevispinus, [83] 78 Stylemys_nebrascensis, [84] 79 Xenochelys_formosa, [85] 81 Adocus_amtgai, [86] 82 Alienochelys_selloumi, [87] 83 Allopleuron_hoffmanni, [88] 84 Angolachelys_mbaxi, [89] 86 Argillochelys_africana, [90] 87 Argillochelys_cuneiceps, [91] 88 Ashleychelys_palmeri, [92] 89 Australochelys_africanus, [93] 90 Basilemys_variolosa, [94] 91 Brachyopsemys_tingitana, [95] 92 Calcarichelys_gemma, [96] 93 Carolinochelys_wilsoni, [97] 94 Chelonoidis_gringorum, [98] 95 Chelosphargis_advena, [99] 96 Chengyuchelys, [100] 97 Chitracephalus_dumonii, [101] 98 Condorchelys_antiqua, [102] 99 Corsochelys_haliniches, [103] 100 Ctenochelys_stenoporus, [104] 101 Dinochelys_whitei, [105] 102 Dorsetochelys_delairi, [106] 103 Echmatemys_wyomingensis, [107] 105 Eochelone_brabantica, [108] 106 Erquelinnesia_gosseleti, [109] 107 Euclastes_acutirostris, [110] 108 Euclastes_platyops, [111] 109 Euclastes_wielandi, [112] 110 Heckerochelys_romani, [113] 111 Helochelydra_nopcsai, [114] 113 Hoplochelys_crassa, [115] 114 Hoyasemys_jimenezi, [116] 115 Indochelys_spatulata, [117] 116 Itilochelys_rasstrigin, [118] 117 Lophochelys, [119] 118 Macroclemys_schmidti, [120] 119 Mexichelys_coahuilaensis, [121] 120 Mongolemys_elegans, [122] 121 Mongolochelys_efremovi, [123] 122 Neurankylus_eximius, [124] 123 Nichollsemys_bareri, [125] 124 Ninjemys_oweni, [126] 125 Niolamia_argentina, [127] 126 Notoemys_laticentralis, [128] 127 Notoemys_oxfordiensis, [129] 128 Notoemys_zapatocaensis, [130] 129 Ocepechelon_bouyai, [131] 130 Pacifichelys_spp., [132] 131 Patagoniaemys_gasparinae, [133] 132 Peligrochelys_walshae, [134] 133 Platychelys_oberndorferi, [135] 135 Portlandemys_macdowelli, [136] 136 Prochelidella_cerrobarcinae, [137] 137 Procolpochelys_grandaeva, [138] 138 Proterochersis_robusta, [139] 139 Protochelydra_zangerli, [140] 141 Rhinochelys_pulchriceps, [141] 142 Rhinochelys_sp., [142] 143 Sandownia_harrisi, [143] 144 Shachemys_laosiana, [144] 145 Siamochelys_peninsularis, [145] 146 Sinemys_gamera, [146] 147 Syllomus_aegyptiacus, [147] 148 Tasbacka_aldabergeni, [148] 149 Tasbacka_ouledabdounensis, [149] 151 Terlinguachelys_fischbecki, [150] 152 Warkalania_carinaminor, [151] 153 Xinjiangchelys_junggarensis, [152] 154 Yaminuechelys_maior, [153] 155 Yehguia_tatsuensis; TREE stored_1 = ((28,((((4,25),18),((104,20),((40,52),(1,15)))),((27,(13,(17,6))),(((21,((134,24),2)),(7,(9,(5,85)))),(((t24t,112),(140,(22,(10,23)))),(150,((80,16),(3,(19,(12,11)))))))))),26); END; BEGIN NOTES; SU C = 109 N = selected B = TRUE; TEXT TAXON = 54 CHARACTER = 206 TEXT = 1; END; BEGIN SETS; CHARSET Cranial = 1 - 31 34 - 61 63 65 - 86 89 - 91 93 - 115; CHARSET Lower_Jaw = 116 - 121; CHARSET Carapace = 122 - 125 127 - 133 135 - 142 144 - 151 153 - 154; CHARSET Plastron = 155 - 156 158 - 191; CHARSET Neck = 192 - 210; CHARSET Ribs = 211 - 213; CHARSET Vertebrae = 214; CHARSET Tail = 215 - 220; CHARSET Pectoral_Girdle = 221 - 229; CHARSET Pelvic_Girdle = 230 - 241; CHARSET Forelimb = 242 - 258; CHARSET Hindlimb = 259 - 263; TAXSET Outgroups = 35 - 36; TAXSET Exclude = 74 - 154; TAXSET Chelonioid_exclusion_set = 40 44 47 63 - 65 88 91 - 92 96 - 97 99 103 - 104 108 - 112 118 - 119 121 125 132 138 141 - 142 147 - 150; END; BEGIN MESQUITECHARMODELS; ProbModelSet * UNTITLED = 'Mk1 (est.)': 1 - 263; END; BEGIN ASSUMPTIONS; OPTIONS DEFTYPE = unord PolyTcount = MINSTEPS; TYPESET * UNTITLED = unord: 1 - 6 8 - 16 18 - 21 23 - 43 45 - 48 50 - 51 53 - 54 56 58 60 - 66 68 - 69 72 - 75 77 - 78 80 - 90 92 - 100 102 - 105 107 - 117 119 - 121 123 - 127 129 - 134 136 - 137 139 - 143 145 - 147 149 - 170 172 - 173 175 - 188 190 192 - 210 212 - 222 224 226 - 228 230 - 243 245 - 255 259 - 261 263, ord: 7 17 22 44 49 - 55\3 57 59 67 - 70\3 71 76 - 79\3 91 101 106 118 122 128 135 - 138\3 144 148 171 - 174\3 189 191 211 223 225 229 244 256 - 258 262; END; BEGIN MacClade; Version 4.0 75; LastModified 2092064106; FileSettings treewindow '1' '1' '1' '0'; Singles 010; Editor 000110011111111000100 '1' '24' Geneva '9' '100' '1' all; EditorPosition '40' '4' '920' '1276'; TreeWindowPosition '40' '2' '920' '1274'; ListWindow Characters open Geneva '9' '50' '25' '265' '495' 00; ListWindow Taxa open Geneva '9' '69' '321' '825' '360' 100; ListWindow Trees open Geneva '9' '50' '10' '185' '379'; ListWindow TypeSets closed Geneva '9' '50' '10' '276' '490'; ListWindow WtSets closed Geneva '9' '50' '10' '276' '490'; ListWindow ExSets closed Geneva '9' '50' '10' '276' '490'; ListWindow CharSets closed Geneva '9' '50' '10' '249' '188'; ListWindow TaxSets open Geneva '9' '151' '93' '153' '184'; ListWindow NexusBlocks closed Geneva '9' '50' '10' '276' '490'; ChartWindowPosition '52' '30' '878' '1220'; StateNamesSymbols closed Geneva '9' '10' '50' '30' '148' '220'; WindowOrder List TaxSets List Taxa Tree List Characters List Trees; OtherSymbols & / 00 ? -; Correlation '0' '0' '1000' '0' '0' 10011010; Salmo 00000001; EditorFile '2'; ExportHTML _ MOSS '100' 110000; PrettyPrint 10; CharLegendPosition '864' '1175' '77' '85'; TreeLegendPosition '877' '1077' '64' '93'; EditorToolsPosition '810' '419' '115' '165'; TreeToolsPosition '799' '5' '126' '138'; TreeWindowProgram 10; TreeWindow 0000; Continuous '0' '3' 1; Calculations 0000001; SummaryMode '0' '0' 0; Charts Geneva '9' ( normal ) 0010; NexusOptions '0' '0' '50' 001011011; TipLabel '1'; TreeFont Geneva '9' ( normal ); TreeShape 1.0 1.0 0100; TraceLabels 0101; ChartColors '0' '0' '-1' '9' 11; ChartBiggestSpot 1; ChartPercent 10; ChartBarWidth '10' 1; ChartVerticalAxis 10101; ChartMinMax '0'; TraceAllChangesDisplay '1' 1; BarsOnBranchesDisplay '0' '0' '-5536' '10000' '10000' '10000' '10000' '-5536' '-536' '-536' '-536' '6' '1' 0000101; ContinuousBranchLabels 0; AllStatesBranchLabels 1; IndexNotation '2' 1; PrintTree 10.00 '2' '2' '2' '2' '2' '2' '2' '2' '2' '2' '2' Geneva '9' ( normal ) Geneva '10' ( normal ) Geneva '9' ( normal ) Geneva '9' ( normal ) Geneva '9' ( bold ) Geneva '9' ( normal ) Geneva '9' ( normal ) '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '0' '1' '1' '1' '1' '81' '114' '-39' '4' '-40' '0' '1' '2' '1' '8' '0' '0' '0' '2' 1000111000000000000100000111000; MatchChar 00 .; EntryInterpretation 01; ColorOptions 0; TreeTools '0' '5' '4' '0' '10' '4' '0' 00100111111101110; EditorTools '0' '0' '0' '1000' '0' '0' '6' '3' 000001011100001; PairAlign '2' '2' '3' '2' '1' '1' '2' '1' '3' 1010; BothTools '1'; END; Begin MESQUITE; MESQUITESCRIPTVERSION 2; TITLE AUTO; tell ProjectCoordinator; timeSaved 1519852432070; getEmployee #mesquite.minimal.ManageTaxa.ManageTaxa; tell It; setID 0 5796436637487034368; tell It; setDefaultOrder 18 32 33 35 36 37 38 41 42 46 51 52 58 60 62 64 68 69 71 81 83 84 85 88 94 102 119 120 121 123 160 161 146 127 112 131 13 17 19 20 25 26 28 29 44 47 53 56 59 70 78 79 80 82 89 90 113 114 116 124 125 126 134 135 136 140 158 159 162 163 147 150 151 0 1 2 3 4 5 6 7 8 9 10 11 12 14 15 16 21 22 23 24 27 30 31 34 39 40 43 45 48 49 50 54 55 57 61 63 65 66 67 72 73 74 75 76 77 86 87 91 92 93 103 105 106 107 108 109 110 111 115 117 118 122 128 129 130 132 133 137 138 139 141 156 157 162 171 162 143 148 162 152 162; attachments ; endTell; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; setID 0 4662462210488397264; tell It; setSelected 109; setDefaultOrder 0 1 2 3 4 5 6 8 9 10 11 12 13 14 15 16 17 18 19 20 21 22 23 24 25 26 27 28 29 30 35 31 32 34 35 36 37 38 39 40 41 42 43 44 45 46 47 48 49 50 51 52 53 54 55 56 57 58 59 60 63 61 65 63 65 66 67 68 69 70 71 72 73 74 75 76 77 78 79 80 81 82 83 84 85 90 86 87 90 95 96 91 95 96 97 98 99 100 101 102 104 105 106 107 109 110 111 112 113 114 115 116 117 129 130 132 133 136 137 138 139 140 141 145 146 126 146 147 148 149 150 151 154 134 154 155 156 159 160 161 162 163 143 163 164 165 166 167 169 170 171 152 171 172 173 174 157 174 176 177 178 179 180 181 182 183 184 185 186 187 188 189 190 191 192 193 194 195 196 197 198 199 200 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218 219 220 221 222 223 224 225 226 227 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getWindow; tell It; useTargetValue off; setTargetValue ; newAssistant #mesquite.lists.TaxonListCurrPartition.TaxonListCurrPartition; newAssistant #mesquite.lists.DefaultTaxaOrder.DefaultTaxaOrder; newAssistant #mesquite.lists.MarkTaxonInList.MarkTaxonInList; tell It; setName 'mark*.+'; endTell; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 2460 1249; setLocation -8 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.lists.TaxonList.TaxonListWindow.ibeam; endTell; endTell; showWindow; getEmployee #mesquite.lists.ColorTaxon.ColorTaxon; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.lists.TaxonListAnnotPanel.TaxonListAnnotPanel; tell It; togglePanel on; endTell; endTell; endTell; getEmployee #mesquite.trees.BasicTreeWindowCoord.BasicTreeWindowCoord; tell It; makeTreeWindow #5796436637487034368 #mesquite.trees.BasicTreeWindowMaker.BasicTreeWindowMaker; tell It; suppressEPCResponse; setTreeSource #mesquite.trees.StoredTrees.StoredTrees; tell It; setTreeBlock 1; setTreeBlockID 015fba48dc441; toggleUseWeights off; endTell; setAssignedID 1146.1510671822777.8732949086927355775; getTreeWindow; tell It; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 2460 1249; setLocation -8 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; getTreeDrawCoordinator #mesquite.trees.BasicTreeDrawCoordinator.BasicTreeDrawCoordinator; tell It; suppress; setTreeDrawer #mesquite.trees.SquareLineTree.SquareLineTree; tell It; setNodeLocs #mesquite.trees.NodeLocsStandard.NodeLocsStandard; tell It; branchLengthsToggle off; toggleScale on; toggleBroadScale off; toggleCenter on; toggleEven on; setFixedTaxonDistance 0; endTell; setEdgeWidth 4; showEdgeLines on; orientUp; endTell; setBackground White; setBranchColor Black; showNodeNumbers off; showBranchColors on; labelBranchLengths off; centerBrLenLabels on; showBrLensUnspecified on; showBrLenLabelsOnTerminals on; setBrLenLabelColor 0 0 255; setNumBrLenDecimals 6; desuppress; getEmployee #mesquite.trees.BasicDrawTaxonNames.BasicDrawTaxonNames; tell It; setColor Black; toggleColorPartition off; toggleColorAssigned on; toggleShadePartition off; toggleShowFootnotes on; toggleNodeLabels on; toggleCenterNodeNames off; toggleShowNames on; namesAngle ?; endTell; endTell; setTreeNumber 1; setTree '((36,((((16,34),28),((8,29),((5,4),(13,25)))),((3,(23,(27,1))),(((30,((10,33),14)),(18,(19,(17,7)))),(((24,9),(11,(31,(20,32)))),(12,((6,26),(15,(2,(22,21)))))))))),35);'; setDrawingSizeMode 0; toggleLegendFloat on; scale 0; toggleTextOnTree off; togglePrintName on; showWindow; endTell; desuppressEPCResponse; getEmployee #mesquite.trees.ColorBranches.ColorBranches; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.ornamental.BranchNotes.BranchNotes; tell It; setAlwaysOn off; endTell; getEmployee #mesquite.ornamental.ColorTreeByPartition.ColorTreeByPartition; tell It; colorByPartition off; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocDoubles.DrawTreeAssocDoubles; tell It; setOn on; toggleShow consensusFrequency; toggleShow posteriorProbability; toggleShow bootstrapFrequency; toggleShow consensusFrequency; toggleShow posteriorProbability; toggleShow bootstrapFrequency; setDigits 4; setThreshold ?; writeAsPercentage off; toggleCentred off; toggleHorizontal on; toggleWhiteEdges on; toggleShowOnTerminals on; setFontSize 10; setOffset 0 0; endTell; getEmployee #mesquite.ornamental.DrawTreeAssocStrings.DrawTreeAssocStrings; tell It; setOn on; toggleCentred on; toggleHorizontal on; setFontSize 10; setOffset 0 0; toggleShowOnTerminals on; endTell; getEmployee #mesquite.trees.TreeInfoValues.TreeInfoValues; tell It; panelOpen false; endTell; endTell; endTell; getEmployee #mesquite.charMatrices.BasicDataWindowCoord.BasicDataWindowCoord; tell It; showDataWindow #4662462210488397264 #mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindowMaker; tell It; getWindow; tell It; getTable; tell It; rowNamesWidth 109; endTell; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 2460 1249; setLocation -8 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.ibeam; endTell; setActive; setTool mesquite.charMatrices.BasicDataWindowMaker.BasicDataWindow.ibeam; colorCells #mesquite.charMatrices.ColorByState.ColorByState; tell It; setStateLimit 9; toggleUniformMaximum on; endTell; colorRowNames #mesquite.charMatrices.TaxonGroupColor.TaxonGroupColor; colorColumnNames #mesquite.charMatrices.CharGroupColor.CharGroupColor; colorText #mesquite.charMatrices.NoColor.NoColor; setBackground White; toggleShowNames on; toggleShowTaxonNames on; toggleTight off; toggleThinRows off; toggleShowChanges on; toggleSeparateLines on; toggleShowStates on; toggleAutoWCharNames on; toggleAutoTaxonNames off; toggleShowDefaultCharNames off; toggleConstrainCW on; toggleBirdsEye off; toggleShowPaleGrid off; toggleShowPaleCellColors off; toggleShowPaleExcluded off; togglePaleInapplicable on; toggleShowBoldCellText off; toggleAllowAutosize on; toggleColorsPanel off; toggleDiagonal on; setDiagonalHeight 80; toggleLinkedScrolling on; toggleScrollLinkedTables off; getInfoPanel; tell It; btspOpen true; apOpen true; fpOpen true; endTell; toggleInfoPanel on; endTell; showWindow; getWindow; tell It; forceAutosize; endTell; getEmployee #mesquite.charMatrices.AlterData.AlterData; tell It; toggleBySubmenus off; endTell; getEmployee #mesquite.charMatrices.ColorCells.ColorCells; tell It; setColor Red; removeColor off; endTell; getEmployee #mesquite.categ.StateNamesStrip.StateNamesStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.AnnotPanel.AnnotPanel; tell It; togglePanel off; endTell; getEmployee #mesquite.charMatrices.CharReferenceStrip.CharReferenceStrip; tell It; showStrip off; endTell; getEmployee #mesquite.charMatrices.QuickKeySelector.QuickKeySelector; tell It; autotabOff; endTell; getEmployee #mesquite.charMatrices.SelSummaryStrip.SelSummaryStrip; tell It; showStrip off; endTell; getEmployee #mesquite.categ.SmallStateNamesEditor.SmallStateNamesEditor; tell It; panelOpen true; endTell; endTell; endTell; getEmployee #mesquite.charMatrices.ManageCharacters.ManageCharacters; tell It; showCharacters #4662462210488397264 #mesquite.lists.CharacterList.CharacterList; tell It; setData 0; getWindow; tell It; useTargetValue off; setTargetValue ; newAssistant #mesquite.lists.DefaultCharOrder.DefaultCharOrder; newAssistant #mesquite.lists.CharListInclusion.CharListInclusion; newAssistant #mesquite.lists.CharListPartition.CharListPartition; newAssistant #mesquite.parsimony.CharListParsModels.CharListParsModels; setExplanationSize 30; setAnnotationSize 20; setFontIncAnnot 0; setFontIncExp 0; setSize 2460 1249; setLocation -8 0; setFont SanSerif; setFontSize 10; getToolPalette; tell It; endTell; endTell; showWindow; getEmployee #mesquite.lists.CharListAnnotPanel.CharListAnnotPanel; tell It; togglePanel off; endTell; endTell; endTell; endTell; end;