GeneID	Length	R-Expression	S-Expression	log2FoldChange(S/R)	Padj	Up/Down-Regulation	Pvalue	Cellular Component	Molecular Function	Biological Process	Kegg Orthology	Nr Description
Solyc02g084420.3.1	1593	113.855145144122	289.688872136366	1.34730477848587	0.0152753460274257	Up	0.000283930501469252	GO:0005634//nucleus;GO:0044464//cell part	GO:0000989//transcription factor activity, transcription factor binding;GO:0046914//transition metal ion binding;GO:0008270//zinc ion binding	GO:0006355//regulation of transcription, DNA-templated;GO:0009640//photomorphogenesis	K12135//zinc finger protein CONSTANS	gi|970010568|ref|XP_015066178.1|//PREDICTED: B-box zinc finger protein 19-like [Solanum pennellii]
Solyc07g054080.2.1	1032	819.521745739906	2177.55106262883	1.40985241341081	0.0404530772327349	Up	0.00105025485534812	GO:0043231//intracellular membrane-bounded organelle;GO:0031224//intrinsic component of membrane;GO:0031090//organelle membrane	GO:0019787//ubiquitin-like protein transferase activity;GO:0046914//transition metal ion binding	GO:0006511//ubiquitin-dependent protein catabolic process;GO:0006950//response to stress;GO:0032446//protein modification by small protein conjugation;GO:0009725//response to hormone	K10666//E3 ubiquitin-protein ligase RNF5 [EC:2.3.2.27]	gi|971568736|ref|XP_006357485.2|//PREDICTED: E3 ubiquitin-protein ligase RMA1H1, partial [Solanum tuberosum]
Solyc02g089640.3.1	4776	1011.05148984149	311.482982964733	-1.69863121852361	9.62148249643071e-05	Down	6.91463730600996e-07	NA	GO:0016759//cellulose synthase activity	NA	K20887	gi|460372585|ref|XP_004232109.1|//PREDICTED: xyloglucan glycosyltransferase 4 [Solanum lycopersicum]
Solyc06g082070.3.1	3985	250.267342507649	106.032986555011	-1.23895689255171	0.0326691899183296	Down	0.000766768244089224	NA	NA	NA	K16573//gamma-tubulin complex component 6	gi|460393844|ref|XP_004242518.1|//PREDICTED: protein PMR5 [Solanum lycopersicum]
Solyc12g008650.2.1	1266	114.527640833306	692.008998316956	2.59509496801191	0.00883108669397614	Up	0.000139558882171426	GO:0044424//intracellular part	GO:0016701//oxidoreductase activity, acting on single donors with incorporation of molecular oxygen;GO:0046914//transition metal ion binding	GO:0006020//inositol metabolic process	K00469//inositol oxygenase [EC:1.13.99.1]	gi|350538319|ref|NP_001234593.1|//myo-inositol oxygenase [Solanum lycopersicum]
BGI_novel_G000226	7589	1806.71986787624	6.2882948202256	-8.16648825971885	6.09305499023104e-39	Down	2.75112540477753e-42	NA	NA	NA	K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6];K03549//KUP system potassium uptake protein	gi|970007609|ref|XP_015064694.1|//PREDICTED: uncharacterized protein LOC107009904 [Solanum pennellii]
Solyc06g033980.2.1	1031	16.0828257942113	1.63650562303539	-3.29683044944372	0.00108412442186959	Down	1.11361691376151e-05	NA	NA	NA	K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1];K01184//polygalacturonase [EC:3.2.1.15];K03469//ribonuclease HI [EC:3.1.26.4];K20667	gi|923929203|ref|XP_013733415.1|//PREDICTED: uncharacterized protein LOC106437020 [Brassica napus]
Solyc03g093130.3.1	1789	147.341811114153	21.9254911621543	-2.7484858147788	0.000474380691825493	Down	4.30167990104014e-06	GO:0030312//external encapsulating structure;GO:0005576//extracellular region	GO:0016758//transferase activity, transferring hexosyl groups;GO:0016798//hydrolase activity, acting on glycosyl bonds	GO:0044042//glucan metabolic process	K08235//xyloglucan:xyloglucosyl transferase [EC:2.4.1.207]	gi|350535843|ref|NP_001234472.1|//xyloglucan endotransglucosylase-hydrolase XTH3 precursor [Solanum lycopersicum]
Solyc01g109800.2.1	1195	77.017829334443	261.599442030555	1.76409509569688	0.0286576125172407	Up	0.000642658579233001	NA	NA	NA	NA	gi|723665897|ref|XP_010315310.1|//PREDICTED: uncharacterized protein LOC104645424 [Solanum lycopersicum]
Solyc04g016380.3.1	1316	1645.13766247634	771.161446251299	-1.09310347959474	0.0496169157158679	Down	0.00140690693634168	NA	GO:0016876//ligase activity, forming aminoacyl-tRNA and related compounds;GO:0032559//adenyl ribonucleotide binding	GO:0010467//gene expression	K14820//ribosome biogenesis protein BRX1	gi|460381699|ref|XP_004236581.1|//PREDICTED: ribosome biogenesis protein BRX1-like [Solanum lycopersicum]
Solyc02g078150.3.1	1211	88.2624956273596	1436.82899950214	4.0249440229772	4.72193054960512e-09	Up	1.61679527416212e-11	NA	NA	NA	NA	gi|460374167|ref|XP_004232883.1|//PREDICTED: uncharacterized protein LOC101251740 [Solanum lycopersicum]
Solyc07g044920.1.1	1098	78.0990597019494	7.46832072745678	-3.38644938806632	0.000801656328011998	Down	7.87268320770334e-06	NA	NA	NA	K11649//SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C;K08955//ATP-dependent metalloprotease [EC:3.4.24.-];K04079//molecular chaperone HtpG	gi|723717412|ref|XP_010324105.1|//PREDICTED: F-box protein CPR30-like [Solanum lycopersicum]
BGI_novel_G000236	1466	2.11520331025504	13.1337017025193	2.63440534883812	0.0264498538248935	Up	0.000582201320222849	NA	NA	NA	K03549//KUP system potassium uptake protein;K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|970033999|ref|XP_015078301.1|//PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Solanum pennellii]
Solyc12g038430.2.1	2228	3.20391127202811	711.779152531728	7.79545167298448	2.08026270304588e-43	Up	5.47911311333904e-47	NA	NA	NA	K13459//disease resistance protein RPS2;K11548//kinetochore protein Nuf2;K20283//golgin subfamily A member 4;K09291//nucleoprotein TPR	gi|723750383|ref|XP_004252246.2|//PREDICTED: myosin-2 heavy chain [Solanum lycopersicum]
Solyc02g084163.1.1	8859	28.1571082647696	147.075495549062	2.38498581530226	4.36532147127442e-06	Up	2.5193665042029e-08	NA	NA	NA	K08739//DNA mismatch repair protein MLH3;K17263//cullin-associated NEDD8-dissociated protein 1;K03544//ATP-dependent Clp protease ATP-binding subunit ClpX	gi|565347858|ref|XP_006340938.1|//PREDICTED: zinc finger CCCH domain-containing protein 45-like [Solanum tuberosum];gi|723672622|ref|XP_010316418.1|//PREDICTED: uncharacterized protein LOC104645757 [Solanum lycopersicum]
Solyc05g053540.3.1	2159	1152.84522585306	574.959771348824	-1.00366591577939	0.00735843342057886	Down	0.000112133255647155	NA	NA	NA	K01687//dihydroxy-acid dehydratase [EC:4.2.1.9]	gi|460389135|ref|XP_004240214.1|//PREDICTED: dihydroxy-acid dehydratase, chloroplastic [Solanum lycopersicum]
Solyc01g100910.3.1	1833	31.9871187795537	135.929729363955	2.0872980707505	0.0113020906338979	Up	0.000192642023447182	NA	NA	NA	K07874//Ras-related protein Rab-1A;K00801//farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21];K01623//fructose-bisphosphate aldolase, class I [EC:4.1.2.13]	gi|460368963|ref|XP_004230334.1|//PREDICTED: WAT1-related protein At1g09380-like [Solanum lycopersicum]
Solyc03g025430.1.1	720	98.4179373447232	424.207797152215	2.10777795285427	0.0147598979156468	Up	0.000272005373541089	NA	NA	NA	K12600//superkiller protein 3	gi|460377264|ref|XP_004234413.1|//PREDICTED: uncharacterized protein LOC101256847 [Solanum lycopersicum]
Solyc02g065060.3.1	1682	482.485559105554	84.4167832514461	-2.51488400210296	1.71528481356089e-06	Down	9.16470796273646e-09	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K04708//3-dehydrosphinganine reductase [EC:1.1.1.102]	gi|460375281|ref|XP_004233435.1|//PREDICTED: 3-ketodihydrosphingosine reductase-like isoform X1 [Solanum lycopersicum]
Solyc02g089620.3.1	1940	2068.57016324238	489.26081063972	-2.07995825885676	0.017482919298396	Down	0.000341409305635231	NA	GO:0016645//oxidoreductase activity, acting on the CH-NH group of donors	GO:0006536//glutamate metabolic process;GO:0006560//proline metabolic process	K00318//proline dehydrogenase [EC:1.5.-.-]	gi|460372587|ref|XP_004232110.1|//PREDICTED: proline dehydrogenase 2, mitochondrial [Solanum lycopersicum]
Solyc04g081810.3.1	2571	22.7749728135306	77.235125766373	1.76180778819702	0.0390058828352026	Up	0.000981861595242147	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13199//plasminogen activator inhibitor 1 RNA-binding protein	gi|460385373|ref|XP_004238378.1|//PREDICTED: CO(2)-response secreted protease [Solanum lycopersicum]
Solyc04g056507.1.1	6188	8.43681830669087	625.350153162039	6.21182138371406	1.7440907200089e-25	Up	1.77184969862063e-28	NA	NA	NA	NA	gi|565367549|ref|XP_006350426.1|//PREDICTED: bZIP transcription factor 17-like [Solanum tuberosum];gi|971555804|ref|XP_015165531.1|//PREDICTED: bZIP transcription factor 17-like [Solanum tuberosum]
Solyc12g039100.1.1	3595	6.49856859480235	61.6523292425633	3.24596151761764	0.000591980134312309	Up	5.57744289899697e-06	NA	NA	NA	K16224//senescence-induced receptor-like serine/threonine-protein kinase	gi|970053435|ref|XP_015088357.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g67720 isoform X1 [Solanum pennellii];gi|969997145|ref|XP_015066341.1|//PREDICTED: ACT domain-containing protein ACR4-like isoform X2 [Solanum pennellii]
Solyc05g015715.1.1	1365	24.2896223646066	1.90168272971282	-3.67499158324609	9.69896998399876e-05	Down	7.04331266475434e-07	NA	NA	NA	NA	gi|113205226|gb|ABI34306.1|//Polyprotein, putative [Solanum demissum];gi|970033776|ref|XP_015078191.1|//PREDICTED: uncharacterized protein LOC107022001 [Solanum pennellii]
Solyc02g092090.2.1	567	49.2027279133854	214.702816563655	2.12553090795863	0.00357983598383423	Up	4.44588086233676e-05	NA	NA	NA	K09060//plant G-box-binding factor	gi|723669661|ref|XP_010316032.1|//PREDICTED: basic leucine zipper 63 [Solanum lycopersicum]
Solyc02g070910.3.1	3787	191.667175129592	718.810515201926	1.90700823104743	0.00069286575115243	Up	6.59574199652198e-06	NA	NA	NA	K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|723675666|ref|XP_004233867.2|//PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2 [Solanum lycopersicum]
Solyc09g075320.1.1	597	282.640327332278	111.191099885054	-1.34592601071035	0.00306639749817063	Down	3.73824280169803e-05	NA	NA	NA	K19040//E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:2.3.2.27];K19041//E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27];K10664//E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:2.3.2.27]	gi|723731809|ref|XP_010326655.1|//PREDICTED: RING-H2 finger protein ATL2-like [Solanum lycopersicum]
Solyc08g007800.3.1	2898	218.879572352322	39.0185267292264	-2.48790610612964	0.0177408824090421	Down	0.000348449434380102	NA	NA	GO:0006810//transport	NA	gi|460398092|ref|XP_004244598.1|//PREDICTED: SPX domain-containing membrane protein At4g22990-like [Solanum lycopersicum]
Solyc12g010900.1.1	2169	293.436448544882	799.91906174945	1.44680594785621	0.00401399575016033	Up	5.23504353851683e-05	NA	NA	NA	K10268//F-box and leucine-rich repeat protein 2/20	gi|460412841|ref|XP_004251806.1|//PREDICTED: F-box/LRR-repeat MAX2 homolog A-like [Solanum lycopersicum]
BGI_novel_G000081	279	10.9101664980571	1.98705058976156	-2.4569726097481	0.0443870886936815	Down	0.00120583504672604	NA	NA	NA	K07466//replication factor A1	gi|723668359|ref|XP_010315728.1|//PREDICTED: replication protein A 70 kDa DNA-binding subunit B-like [Solanum lycopersicum]
Solyc12g056980.1.1	924	160.433449027804	611.143850554568	1.92953703746668	1.70015279756891e-05	Up	1.10029830749088e-07	NA	NA	NA	K09286//EREBP-like factor	gi|460414357|ref|XP_004252538.1|//PREDICTED: ethylene-responsive transcription factor RAP2-13-like [Solanum lycopersicum]
Solyc11g020210.2.1	1731	109.383117101108	389.33288900436	1.83161414148428	1.54608212512597e-05	Up	9.79963826447295e-08	NA	NA	NA	K05387//glutamate receptor, ionotropic, plant;K15227//arogenate dehydrogenase (NADP+), plant [EC:1.3.1.78]	gi|147794801|emb|CAN71427.1|//hypothetical protein VITISV_027864 [Vitis vinifera]
Solyc08g067750.1.1	1000	2.09011613901636	15.9240421394049	2.92955158013722	0.00779257275709305	Up	0.000120508236564144	NA	NA	NA	K14568//rRNA small subunit pseudouridine methyltransferase Nep1 [EC:2.1.1.260]	gi|970069371|ref|XP_015061820.1|//PREDICTED: ribosomal RNA small subunit methyltransferase NEP1 [Solanum pennellii];gi|970045733|ref|XP_015084345.1|//PREDICTED: ribosomal RNA small subunit methyltransferase NEP1-like [Solanum pennellii]
Solyc02g091430.3.1	4426	345.958636019952	786.49875931472	1.18484493512798	0.015535049362688	Up	0.000291095856666239	NA	NA	NA	K08332//vacuolar protein 8	gi|460372345|ref|XP_004231991.1|//PREDICTED: U-box domain-containing protein 2 isoform X1 [Solanum lycopersicum]
Solyc03g026120.3.1	2270	767.194615251983	331.621246457229	-1.21005615345317	0.0203783547931301	Down	0.000412520407822703	NA	NA	NA	K16302//metal transporter CNNM;K15449//tRNA wybutosine-synthesizing protein 1 [EC:4.1.3.44]	gi|460377167|ref|XP_004234366.1|//PREDICTED: probable methyltransferase PMT16 [Solanum lycopersicum]
Solyc04g063380.3.1	1694	290.894265168843	864.664943533033	1.57164634398086	1.12067335569342e-06	Up	5.73471710028616e-09	NA	NA	NA	K03875//F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)	gi|460384010|ref|XP_004237708.1|//PREDICTED: F-box protein SKP2B-like [Solanum lycopersicum]
Solyc03g117740.3.1	2150	4769.03932270102	2195.91665292794	-1.11887538119988	0.00672196672785439	Down	9.96521387204964e-05	NA	NA	NA	NA	gi|460380272|ref|XP_004235881.1|//PREDICTED: uncharacterized protein LOC101253367 [Solanum lycopersicum]
Solyc01g095320.3.1	4039	21450.2322971259	3145.07510788166	-2.76982689581259	0.000452859717954031	Down	4.07244883135844e-06	NA	NA	NA	K01555//fumarylacetoacetase [EC:3.7.1.2];K20478//golgin subfamily B member 1	gi|460368215|ref|XP_004229963.1|//PREDICTED: BAG family molecular chaperone regulator 6 [Solanum lycopersicum]
Solyc02g092790.3.1	3937	11928.290841291	3067.80177274396	-1.95911016900341	0.00359390022614219	Down	4.51654692226922e-05	GO:0044464//cell part	NA	GO:0051234//establishment of localization	K12347//natural resistance-associated macrophage protein	gi|697124709|ref|XP_009616361.1|//PREDICTED: metal transporter Nramp3-like [Nicotiana tomentosiformis];gi|350535300|ref|NP_001234443.1|//Arabinogalactan 1 precursor [Solanum lycopersicum]
Solyc07g007150.1.1	417	125.14677507188	317.021610427386	1.34096007352298	0.0362641815626849	Up	0.000900566649033828	NA	NA	NA	NA	gi|723713982|ref|XP_010323473.1|//PREDICTED: uncharacterized protein LOC104648246 [Solanum lycopersicum]
Solyc00g006820.3.1	3055	742.341942913925	2057.84976067699	1.47098186823599	0.000138603600648793	Up	1.03260386531441e-06	GO:0016021//integral component of membrane	GO:0005215//transporter activity	GO:0006857//oligopeptide transport	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460415780|ref|XP_004253233.1|//PREDICTED: protein NRT1/ PTR FAMILY 6.1 [Solanum lycopersicum]
Solyc12g005850.2.1	2082	535.899581752267	234.360550224493	-1.19323294790757	0.0496169157158679	Down	0.00140948550087358	NA	NA	NA	K03327//multidrug resistance protein, MATE family	gi|460412251|ref|XP_004251515.1|//PREDICTED: protein TRANSPARENT TESTA 12 [Solanum lycopersicum]
Solyc06g075680.1.1	582	24.0301642189448	75.446838112289	1.65061393268939	0.0347583282505602	Up	0.000846169183057246	NA	NA	NA	NA	gi|970001921|ref|XP_015060073.1|//PREDICTED: uncharacterized protein LOC107005912 isoform X4 [Solanum pennellii]
Solyc11g071420.2.1	4057	13.2683446087011	51.2109113746093	1.94846284647231	0.0144482870386773	Up	0.000263664793383697	NA	NA	NA	K19613//leucine-rich repeat protein SHOC2	gi|970061776|ref|XP_015057754.1|//PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC107004051 [Solanum pennellii]
Solyc08g078870.2.1	327	1407.41660043933	4343.49471934335	1.62580684877662	0.00441019137405743	Up	5.8967645843258e-05	NA	NA	NA	K02883//large subunit ribosomal protein L18e;K11855//ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12]	gi|460400459|ref|XP_004245752.1|//PREDICTED: 14 kDa proline-rich protein DC2.15-like [Solanum lycopersicum]
Solyc12g007120.2.1	1337	928.948389278175	393.262491336143	-1.24010585405797	0.0287964671954239	Down	0.00065010649498643	GO:0016020//membrane	GO:0016787//hydrolase activity	NA	K03100//signal peptidase I [EC:3.4.21.89]	gi|460412441|ref|XP_004251609.1|//PREDICTED: chloroplast processing peptidase [Solanum lycopersicum]
Solyc01g106620.2.1	896	158.36797659713	3.84626183188924	-5.36367985241918	7.7874624611685e-12	Down	2.0804072496631e-14	NA	NA	GO:0006950//response to stress	K13449//pathogenesis-related protein 1	gi|350538759|ref|NP_001234358.1|//PR1 protein precursor [Solanum lycopersicum]
Solyc08g005050.3.1	1833	1977.01241179592	776.645491638359	-1.34799380841043	0.0236093451157625	Down	0.000503687349235706	NA	NA	NA	K13422//transcription factor MYC2	gi|667667721|ref|NP_001288107.1|//transcription factor MYC2 [Solanum lycopersicum]
Solyc04g005380.3.1	1844	91.5612162279201	409.63350383953	2.16152518612123	0.000532327697910632	Up	4.94732066764218e-06	NA	NA	NA	K05747//Wiskott-Aldrich syndrome protein	gi|460382999|ref|XP_004237223.1|//PREDICTED: ninja-family protein AFP3 isoform X1 [Solanum lycopersicum]
Solyc02g062890.2.1	1746	37.6331871405728	119.717457375791	1.66955616253825	0.0290025736170167	Up	0.000656942067104792	GO:0031224//intrinsic component of membrane	GO:0022857//transmembrane transporter activity	GO:0006810//transport	K08150//MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13	gi|460375438|ref|XP_004233513.1|//PREDICTED: probable polyol transporter 6 isoform X2 [Solanum lycopersicum]
Solyc03g025600.3.1	1551	677.727554525114	94.1624734808958	-2.84748130560631	2.61785197612843e-10	Down	8.07705392040229e-13	NA	NA	NA	K01280//tripeptidyl-peptidase II [EC:3.4.14.10];K19882//O-palmitoleoyl-L-serine hydrolase [EC:3.1.1.98]	gi|460377239|ref|XP_004234401.1|//PREDICTED: uncharacterized protein LOC101253061 [Solanum lycopersicum]
Solyc05g006707.1.1	777	5.04353815262212	229.555987006368	5.50826607787207	1.80978363846925e-19	Up	2.51954677440502e-22	NA	GO:0003824//catalytic activity	NA	NA	gi|971568197|ref|XP_015168811.1|//PREDICTED: HIPL1 protein-like isoform X1 [Solanum tuberosum]
BGI_novel_G000125	5177	485.939040420933	118.053443022229	-2.04133522516149	0.0446628458042923	Down	0.00121836788230846	NA	NA	NA	NA	gi|970014769|ref|XP_015068383.1|//PREDICTED: uncharacterized protein LOC107012923 [Solanum pennellii]
Solyc07g045090.3.1	1460	98.0930029571958	6.06199129247078	-4.01628654673495	2.11396153875893e-07	Down	9.30629868061837e-10	NA	GO:0003824//catalytic activity;GO:0005488//binding	GO:0008152//metabolic process	K07119//uncharacterized protein	gi|460396077|ref|XP_004243606.1|//PREDICTED: 2-alkenal reductase (NADP(+)-dependent)-like [Solanum lycopersicum]
Solyc01g087580.3.1	375	296.937948439132	59.4508216015635	-2.32039282735907	0.0116382782132705	Down	0.000199686001627398	NA	NA	NA	NA	gi|697139518|ref|XP_009623848.1|//PREDICTED: uncharacterized protein LOC104114990 [Nicotiana tomentosiformis]
Solyc03g113410.2.1	2034	193.73286199206	722.890195067122	1.89970783035094	0.0105686888993596	Up	0.000176562361113582	NA	NA	NA	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460380875|ref|XP_004236179.1|//PREDICTED: protein NRT1/ PTR FAMILY 2.11-like [Solanum lycopersicum]
Solyc00g010750.2.1	2550	22.5245116302281	2.7221288666161	-3.0486885549892	0.00465353321899476	Down	6.3245950576159e-05	NA	NA	NA	NA	gi|970015294|ref|XP_015068675.1|//PREDICTED: guanylate-binding protein 2-like [Solanum pennellii]
Solyc06g009810.3.1	825	39.9591976474085	170.500534556961	2.09317674219341	0.0267525097685942	Up	0.00059087644332185	NA	NA	NA	NA	gi|460390052|ref|XP_004240656.1|//PREDICTED: uncharacterized protein LOC101250021 [Solanum lycopersicum]
Solyc12g082720.1.1	810	1.67247437060203	10.8495780423084	2.69758292706585	0.0204348801279338	Up	0.000415656625534762	NA	NA	NA	NA	gi|971575837|ref|XP_015170828.1|//PREDICTED: uncharacterized protein LOC102582469 isoform X1 [Solanum tuberosum]
Solyc09g091510.3.1	1452	6778.28432258201	408.220105517628	-4.05350100916146	5.76681047845604e-11	Down	1.73588004017189e-13	NA	GO:0016747//transferase activity, transferring acyl groups other than amino-acyl groups	GO:0009699//phenylpropanoid biosynthetic process	K00660//chalcone synthase [EC:2.3.1.74]	gi|807066326|ref|NP_001234033.2|//chalcone synthase 1 [Solanum lycopersicum]
Solyc11g016930.1.1	3284	174.342460790441	620.801204476015	1.83220737861787	0.00992233956301063	Up	0.000161284219107521	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13415//protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1]	gi|460410328|ref|XP_004250582.1|//PREDICTED: F-box protein At3g07870-like [Solanum lycopersicum];gi|723742568|ref|XP_010312813.1|//PREDICTED: F-box protein At3g07870-like [Solanum lycopersicum];gi|970061270|ref|XP_015057425.1|//PREDICTED: F-box protein At3g07870-like [Solanum pennellii];gi|460409877|ref|XP_004250363.1|//PREDICTED: F-box protein CPR30-like [Solanum lycopersicum]
Solyc11g007980.2.1	1566	64.5727388756182	14.5529426333712	-2.14961432242475	0.00841021443277696	Down	0.000132274885536395	NA	GO:0005506//iron ion binding;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30];K15472//premnaspirodiene oxygenase [EC:1.14.13.121]	gi|460409200|ref|XP_004250027.1|//PREDICTED: cytochrome P450 71D7 [Solanum lycopersicum]
Solyc07g008360.2.1	2194	21.3549398680568	4.55964655338042	-2.22757593404405	0.0339496331160689	Down	0.000816824207355387	NA	GO:0032559//adenyl ribonucleotide binding;GO:0016703//oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases);GO:0016405//CoA-ligase activity	GO:0006725//cellular aromatic compound metabolic process	K01904//4-coumarate--CoA ligase [EC:6.2.1.12]	gi|460394398|ref|XP_004242790.1|//PREDICTED: 4-coumarate--CoA ligase 2 [Solanum lycopersicum]
Solyc10g086150.2.1	1367	19825.8807450888	7160.47881747198	-1.46925698955883	0.000427682326871523	Down	3.79775855595739e-06	GO:0009536//plastid	GO:0003676//nucleic acid binding	NA	K11294//nucleolin	gi|723739866|ref|XP_010312344.1|//PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like [Solanum lycopersicum]
Solyc01g095680.2.1	1154	469.836128261146	179.54530127026	-1.38780975636923	0.00441019137405743	Down	5.90746935005623e-05	NA	NA	NA	NA	gi|460370741|ref|XP_004231208.1|//PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Solanum lycopersicum]
BGI_novel_G000446	11021	4.12412195321981	1103.94676503172	8.06436789337521	5.66709183627254e-43	Up	1.70586351695753e-46	NA	NA	NA	K05909//laccase [EC:1.10.3.2];K00620//glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1];K18195//rhamnogalacturonan endolyase [EC:4.2.2.23]	gi|970022456|ref|XP_015072526.1|//PREDICTED: uncharacterized protein LOC107016627 [Solanum pennellii]
Solyc03g113780.3.1	2041	2146.30957358915	949.29869723243	-1.17692417025446	0.016778657343621	Down	0.000322605783293462	NA	NA	NA	K00275//pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5];K17759//NAD(P)H-hydrate epimerase [EC:5.1.99.6]	gi|460380816|ref|XP_004236150.1|//PREDICTED: pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic-like [Solanum lycopersicum]
Solyc06g051830.2.1	4274	737.726850943288	275.461083229828	-1.42123823500073	0.0391617222450277	Down	0.000991678484061543	GO:0044464//cell part	NA	NA	K03549//KUP system potassium uptake protein	gi|723706296|ref|XP_010322206.1|//PREDICTED: potassium transporter 26-like [Solanum lycopersicum]
Solyc03g044028.1.1	2753	184.427769535044	27.6823729920757	-2.73601637635279	5.82687092534229e-05	Down	4.01218113157106e-07	GO:0005739//mitochondrion	NA	NA	NA	gi|57013998|ref|YP_173469.1|//hypothetical protein NitaMp132 [Nicotiana tabacum]
Solyc12g013900.2.1	1592	5565.26998260627	17569.4461248483	1.65854512877774	0.000296861776227641	Up	2.46854244445606e-06	NA	GO:0009055//electron carrier activity	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6];K14306//nuclear pore complex protein Nup62	gi|460412959|ref|XP_004251863.1|//PREDICTED: early nodulin-like protein 2 [Solanum lycopersicum]
Solyc05g023730.1.1	258	702.010321539559	2299.81573684148	1.71195412836713	0.000395448471511898	Up	3.46688843218844e-06	GO:0030529//intracellular ribonucleoprotein complex;GO:0009536//plastid	GO:0005198//structural molecule activity;GO:0003824//catalytic activity;GO:0003676//nucleic acid binding	GO:0010467//gene expression	K02886//large subunit ribosomal protein L2	gi|827346437|gb|AKJ77629.1|//ribosomal protein L2 (chloroplast) [Fagopyrum cymosum]
Solyc04g009620.3.1	1781	40.4999746471166	125.053252237291	1.62654966792884	0.0127300191180319	Up	0.000224165592325655	GO:0005730//nucleolus;GO:0005829//cytosol;GO:0009536//plastid;GO:0009570//chloroplast stroma	GO:0010181//FMN binding;GO:0016838//carbon-oxygen lyase activity, acting on phosphates;GO:0004107//chorismate synthase activity	GO:0008652//cellular amino acid biosynthetic process;GO:0009423//chorismate biosynthetic process;GO:0009073//aromatic amino acid family biosynthetic process	K01736//chorismate synthase [EC:4.2.3.5]	gi|350534710|ref|NP_001234411.1|//chorismate synthase 2, chloroplastic precursor [Solanum lycopersicum];gi|747074712|ref|XP_011084359.1|//PREDICTED: chorismate synthase 1, chloroplastic [Sesamum indicum]
Solyc06g084320.1.1	834	254.828452319483	556.875470739799	1.12782837859802	0.00809101159415933	Up	0.000125732316980389	NA	NA	NA	NA	gi|460393464|ref|XP_004242329.1|//PREDICTED: EID1-like F-box protein 3 [Solanum lycopersicum]
Solyc02g090970.1.1	1083	271.659838590867	63.9787780705431	-2.08613595361451	0.00225497145971094	Down	2.63437734107523e-05	NA	NA	NA	K20716	gi|460372409|ref|XP_004232023.1|//PREDICTED: mitogen-activated protein kinase kinase kinase NPK1-like [Solanum lycopersicum]
Solyc04g056503.1.1	682	1.71380523891685	29.4225431010508	4.10164687710882	2.13075047719668e-06	Up	1.186556310438e-08	GO:0032991//macromolecular complex;GO:0005874//microtubule;GO:0015630//microtubule cytoskeleton;GO:0005737//cytoplasm	GO:0032561//guanyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity;GO:0005525//GTP binding;GO:0005200//structural constituent of cytoskeleton;GO:0003924//GTPase activity	GO:0007017//microtubule-based process;GO:0009207//purine ribonucleoside triphosphate catabolic process;GO:0043623//cellular protein complex assembly	K07375//tubulin beta	gi|728845993|gb|KHG25436.1|//Tubulin beta-8 chain -like protein [Gossypium arboreum];gi|728831583|gb|KHG11026.1|//Tubulin beta-8 chain -like protein [Gossypium arboreum]
Solyc06g076400.3.1	4216	700.159441153466	2658.07399938841	1.92462587220799	1.73660731258482e-08	Up	6.45244787025096e-11	NA	NA	NA	K14497//protein phosphatase 2C [EC:3.1.3.16]	gi|460391200|ref|XP_004241211.1|//PREDICTED: probable protein phosphatase 2C 24 [Solanum lycopersicum]
Solyc01g110960.3.1	2550	2127.26546251714	593.027282402281	-1.84282969612673	0.00351988673614104	Down	4.34406761280152e-05	NA	NA	NA	K10352//myosin heavy chain;K14488//SAUR family protein;K20478//golgin subfamily B member 1	gi|460370114|ref|XP_004230899.1|//PREDICTED: cingulin-like protein 1 [Solanum lycopersicum]
Solyc11g069640.2.1	1414	78.962333701351	19.0163676494678	-2.05392292797705	0.0145350004518679	Down	0.000266887918896471	NA	GO:0016836//hydro-lyase activity;GO:0046914//transition metal ion binding	GO:0044237//cellular metabolic process	K01674//carbonic anhydrase [EC:4.2.1.1]	gi|460411510|ref|XP_004251153.1|//PREDICTED: alpha carbonic anhydrase 7 [Solanum lycopersicum]
Solyc04g080880.3.1	1772	5181.50116324385	2251.30540119941	-1.20260835105662	0.0438954077865124	Down	0.00118091645284857	NA	GO:0004175//endopeptidase activity	GO:0019538//protein metabolic process	K16290//xylem cysteine proteinase [EC:3.4.22.-];K16292//KDEL-tailed cysteine endopeptidase [EC:3.4.22.-]	gi|460385224|ref|XP_004238304.1|//PREDICTED: zingipain-2 [Solanum lycopersicum]
Solyc12g035620.2.1	897	1.89939327808542	41.542389655492	4.45097364900291	7.94426017158333e-08	Up	3.34784640560384e-10	NA	NA	NA	K07447//putative holliday junction resolvase [EC:3.1.-.-]	gi|565362331|ref|XP_006347901.1|//PREDICTED: putative pre-16S rRNA nuclease [Solanum tuberosum];gi|969996073|ref|XP_015056498.1|//PREDICTED: putative pre-16S rRNA nuclease [Solanum pennellii]
Solyc02g079290.3.1	926	32.8233690144223	90.7492896286527	1.46716302424195	0.0224553576292225	Up	0.000474186589782262	NA	NA	NA	K16223//protein FLOWERING LOCUS T	gi|460373975|ref|XP_004232787.1|//PREDICTED: protein MOTHER of FT and TF 1 [Solanum lycopersicum];gi|970008899|ref|XP_015065328.1|//PREDICTED: protein MOTHER of FT and TF 1-like [Solanum pennellii]
Solyc09g011510.2.1	839	129.224691627618	9.91990225755742	-3.70341204375198	1.58671079954174e-05	Down	1.02091111382638e-07	NA	GO:0016765//transferase activity, transferring alkyl or aryl (other than methyl) groups	GO:0009755//hormone-mediated signaling pathway	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|723727223|ref|XP_010325822.1|//PREDICTED: LOW QUALITY PROTEIN: probable glutathione S-transferase [Solanum lycopersicum]
Solyc12g006140.2.1	944	6960.53266860377	21241.0077225046	1.60958259203501	0.00115660322710856	Up	1.21417880258603e-05	GO:0031224//intrinsic component of membrane;GO:0009521//photosystem;GO:0009534//chloroplast thylakoid	GO:0043169//cation binding;GO:0046906//tetrapyrrole binding	GO:0006464//cellular protein modification process;GO:0006091//generation of precursor metabolites and energy	K08913//light-harvesting complex II chlorophyll a/b binding protein 2	gi|822092488|ref|NP_001295874.1|//chlorophyll a-b binding protein 5, chloroplastic [Solanum lycopersicum]
Solyc01g087570.2.1	548	1080.25657457886	292.330269844071	-1.88570288303186	0.0395442603027263	Down	0.00100731701188794	NA	NA	NA	NA	gi|697139518|ref|XP_009623848.1|//PREDICTED: uncharacterized protein LOC104114990 [Nicotiana tomentosiformis]
Solyc09g065760.3.1	2253	121.041831497195	418.882981520399	1.79104154882133	3.66538224845151e-05	Up	2.49627191545217e-07	NA	NA	NA	NA	gi|460403455|ref|XP_004247206.1|//PREDICTED: uncharacterized protein LOC101268222 [Solanum lycopersicum]
Solyc07g017610.3.1	3868	354.725827391529	1297.01518668285	1.87041909109026	0.000147120209310418	Up	1.1071242752035e-06	NA	GO:0004753//saccharopine dehydrogenase activity	GO:0008152//metabolic process	K14157//alpha-aminoadipic semialdehyde synthase [EC:1.5.1.8 1.5.1.9]	gi|460394627|ref|XP_004242902.1|//PREDICTED: alpha-aminoadipic semialdehyde synthase [Solanum lycopersicum]
Solyc02g005070.2.1	1169	310.34975410209	5.77328798424587	-5.74835800068251	3.09603624710123e-17	Down	5.35868109141952e-20	NA	NA	NA	K07466//replication factor A1	gi|723726857|ref|XP_010325772.1|//PREDICTED: uncharacterized protein LOC101258482 [Solanum lycopersicum]
Solyc11g071740.2.1	606	303.042700283917	61.9905674916992	-2.28940047492867	0.0429704347240481	Down	0.00113224151891616	NA	NA	NA	K13448//calcium-binding protein CML	gi|460411634|ref|XP_004251211.1|//PREDICTED: putative calcium-binding protein CML19 [Solanum lycopersicum]
Solyc09g011230.3.1	1251	232.206553384751	500.896964982023	1.10910518125638	0.00162731308904055	Up	1.78179669981864e-05	NA	NA	NA	NA	gi|460401891|ref|XP_004246449.1|//PREDICTED: CASP-like protein 5B2 [Solanum lycopersicum]
Solyc03g005775.1.1	243	20.2018303904332	81.4927698616532	2.01218605281074	0.0120799707775852	Up	0.00020953706319249	GO:0031224//intrinsic component of membrane;GO:0009521//photosystem;GO:0009534//chloroplast thylakoid	GO:0043169//cation binding;GO:0046906//tetrapyrrole binding	GO:0006464//cellular protein modification process;GO:0006091//generation of precursor metabolites and energy	K08912//light-harvesting complex II chlorophyll a/b binding protein 1	gi|475604137|gb|EMT25652.1|//hypothetical protein F775_43704 [Aegilops tauschii]
Solyc03g111050.3.1	2406	2089.82580311022	734.092959540719	-1.50934802097145	0.00465353321899476	Down	6.31588169022181e-05	NA	NA	NA	NA	gi|460381218|ref|XP_004236349.1|//PREDICTED: uncharacterized protein LOC778252 [Solanum lycopersicum]
Solyc06g048530.3.1	1108	1047.65508713591	3.80885323699767	-8.10359141138925	5.72210153371416e-44	Down	1.07651381527527e-47	NA	GO:0016790//thiolester hydrolase activity;GO:0004416//hydroxyacylglutathione hydrolase activity;GO:0046914//transition metal ion binding	GO:0019243//methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	K01069//hydroxyacylglutathione hydrolase [EC:3.1.2.6]	gi|460390439|ref|XP_004240841.1|//PREDICTED: hydroxyacylglutathione hydrolase cytoplasmic [Solanum lycopersicum]
Solyc02g022830.3.1	3042	601.619019903843	252.808061738213	-1.25080770784593	0.0256838292403678	Down	0.000557437725970013	NA	NA	NA	K17680//twinkle protein [EC:3.6.4.12]	gi|460371463|ref|XP_004231556.1|//PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial isoform X1 [Solanum lycopersicum];gi|723667798|ref|XP_010315627.1|//PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial isoform X3 [Solanum lycopersicum];gi|723667795|ref|XP_010315626.1|//PREDICTED: twinkle homolog protein, chloroplastic/mitochondrial isoform X2 [Solanum lycopersicum]
Solyc07g042440.3.1	1050	9510.42838886479	4097.60479005493	-1.21472948293244	9.69418957879843e-05	Down	7.00336531259848e-07	NA	GO:0016209//antioxidant activity;GO:0016705//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	GO:0019725//cellular homeostasis;GO:0008152//metabolic process	K03564//peroxiredoxin Q/BCP [EC:1.11.1.15]	gi|840083088|ref|NP_001296952.1|//peroxiredoxin Q, chloroplastic [Solanum lycopersicum]
Solyc09g008840.3.1	2066	1608.05226533171	460.281365198052	-1.80472635775359	0.000155692717462823	Down	1.19506770374444e-06	NA	NA	NA	K00873//pyruvate kinase [EC:2.7.1.40]	gi|460402152|ref|XP_004246578.1|//PREDICTED: pyruvate kinase, cytosolic isozyme [Solanum lycopersicum]
Solyc02g090990.1.1	1071	54.5733440157604	14.926907618275	-1.87028113267705	0.0413481336586631	Down	0.0010797157225839	NA	NA	NA	K20716	gi|460375668|ref|XP_004233626.1|//PREDICTED: mitogen-activated protein kinase kinase kinase NPK1-like [Solanum lycopersicum]
Solyc09g007430.1.1	1164	310.078292657107	121.366642059727	-1.35326058461091	0.0108038004980666	Down	0.000180896685917885	GO:0000229//cytoplasmic chromosome	GO:0043566//structure-specific DNA binding	NA	K01810//glucose-6-phosphate isomerase [EC:5.3.1.9]	gi|460402362|ref|XP_004246681.1|//PREDICTED: protein OSB2, chloroplastic-like [Solanum lycopersicum]
Solyc04g074400.1.1	930	2.98284676918792	19.9287679227619	2.74009074718637	0.0133773121382063	Up	0.000240093986903126	NA	NA	NA	K14299//nucleoporin SEH1	gi|460384461|ref|XP_004237930.1|//PREDICTED: protein EXORDIUM-like [Solanum lycopersicum]
BGI_novel_G000340	942	118.843968347578	3.04203797827569	-5.28788670976409	1.14792976196254e-11	Down	3.15305988724331e-14	NA	NA	NA	K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6];K03549//KUP system potassium uptake protein;K12447//UDP-sugar pyrophosphorylase [EC:2.7.7.64];K05658//ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:3.6.3.44]	gi|147789747|emb|CAN67403.1|//hypothetical protein VITISV_025614 [Vitis vinifera]
Solyc02g077430.3.1	1280	122.267284205929	387.353496077871	1.66361233595023	0.00430397425083317	Up	5.68421929503873e-05	NA	NA	NA	K00145//N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]	gi|723674942|ref|XP_004232942.2|//PREDICTED: phospholipase A1-IIgamma-like [Solanum lycopersicum]
Solyc01g109810.2.1	1052	101.646958057063	345.564059545573	1.765386136596	0.0169844775232726	Up	0.00032975845287311	NA	NA	NA	NA	gi|460370258|ref|XP_004230971.1|//PREDICTED: uncharacterized protein LOC101244426 [Solanum lycopersicum]
Solyc10g085280.1.1	1428	268.553496766381	62.3971929366626	-2.10565647345954	0.0073463161926723	Down	0.000111672188051308	NA	NA	NA	K04628//2-hydroxyacylsphingosine 1-beta-galactosyltransferase [EC:2.4.1.45];K13493//cytokinin-N-glucosyltransferase [EC:2.4.1.-];K00699//glucuronosyltransferase [EC:2.4.1.17]	gi|723739608|ref|XP_004249643.2|//PREDICTED: UDP-glucose iridoid glucosyltransferase-like [Solanum lycopersicum]
BGI_novel_G000200	571	135.438923893869	475.601943155741	1.8121121937688	0.0360416116066822	Up	0.000893683337050969	NA	NA	NA	K02183//calmodulin	gi|697148846|ref|XP_009628614.1|//PREDICTED: probable calcium-binding protein CML10 [Nicotiana tomentosiformis]
Solyc01g065530.3.1	2764	1578.36638278483	370.794271910831	-2.08974127165012	0.0422129612412933	Down	0.00110706377639242	NA	NA	NA	K10956//protein transport protein SEC61 subunit alpha	gi|970001999|ref|XP_015060324.1|//PREDICTED: COBRA-like protein 7 [Solanum pennellii]
Solyc12g042240.2.1	2094	188.977275135873	2.45352385419663	-6.26721364995943	3.93507384470601e-19	Down	5.77446212678386e-22	GO:0031224//intrinsic component of membrane	NA	GO:0015833//peptide transport	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|971549174|ref|XP_015163861.1|//PREDICTED: protein NRT1/ PTR FAMILY 8.3-like [Solanum tuberosum]
Solyc11g012195.1.1	859	89.5536770120496	26.6720696282238	-1.74742289384828	0.00357983598383423	Down	4.46307558441843e-05	NA	GO:0005515//protein binding;GO:0034062//RNA polymerase activity;GO:0003676//nucleic acid binding	GO:0010467//gene expression	K03020//DNA-directed RNA polymerases I and III subunit RPAC2	gi|723742134|ref|XP_010312738.1|//PREDICTED: DNA-directed RNA polymerases I and III subunit RPAC2-like [Solanum lycopersicum]
Solyc02g085150.3.1	1330	613.026120637046	136.455445067504	-2.16751858297719	0.00673499398535516	Down	0.000100838767861569	NA	NA	NA	K20254//perilipin-4	gi|460373212|ref|XP_004232415.1|//PREDICTED: protein RADIALIS-like 5 [Solanum lycopersicum];gi|460375861|ref|XP_004233722.1|//PREDICTED: embryonic protein DC-8 [Solanum lycopersicum]
Solyc06g009890.2.1	1408	70.2268570219976	3.36472491099376	-4.38346240461488	4.08307087188344e-07	Down	1.9203968054537e-09	NA	NA	NA	NA	NA
BGI_novel_G000098	1367	1.66316289555781	16.7004130790195	3.32788240482974	0.000880126855197834	Up	8.74265303729647e-06	NA	NA	NA	NA	NA
Solyc06g066760.3.1	2260	282.387769925927	583.898473371903	1.04803993158968	0.0431789989340371	Up	0.00115473445958007	NA	GO:0004721//phosphoprotein phosphatase activity	GO:0006796//phosphate-containing compound metabolic process	K14165//atypical dual specificity phosphatase [EC:3.1.3.16 3.1.3.48]	gi|460392240|ref|XP_004241725.1|//PREDICTED: putative dual specificity protein phosphatase DSP8 [Solanum lycopersicum]
Solyc07g008103.1.1	514	39.1329157995174	4.53999674059143	-3.10761944279854	0.00222304998468926	Down	2.57628549228391e-05	NA	GO:0046914//transition metal ion binding	NA	K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6];K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|350535054|ref|NP_001234429.1|//dicyanin precursor [Solanum lycopersicum]
Solyc07g006870.3.1	1357	28.5359640637115	106.257181394707	1.89670713993457	0.00040410845699524	Up	3.55801553737766e-06	NA	NA	NA	K08235//xyloglucan:xyloglucosyl transferase [EC:2.4.1.207]	gi|460394190|ref|XP_004242687.1|//PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 25 [Solanum lycopersicum]
Solyc07g056000.2.1	1215	597.82477856359	117.615319794618	-2.34564670655187	0.026176421151587	Down	0.000572433743960812	GO:0030312//external encapsulating structure;GO:0005576//extracellular region	GO:0016758//transferase activity, transferring hexosyl groups;GO:0016798//hydrolase activity, acting on glycosyl bonds	GO:0044042//glucan metabolic process	K08235//xyloglucan:xyloglucosyl transferase [EC:2.4.1.207]	gi|350535681|ref|NP_001234207.1|//xyloglycan endo-transglycosylase precursor [Solanum lycopersicum]
Solyc01g057170.3.1	1291	8.52636691270399	109.479554458731	3.68258651864734	3.57227005601278e-10	Up	1.1290615370624e-12	NA	NA	NA	K07466//replication factor A1	gi|723657262|ref|XP_010319453.1|//PREDICTED: uncharacterized protein LOC104646748 [Solanum lycopersicum]
Solyc10g045310.2.1	1700	876.351618596846	292.567529083826	-1.58274017924748	0.00225497145971094	Down	2.6472178779765e-05	NA	NA	NA	NA	gi|971537397|ref|XP_015169041.1|//PREDICTED: uncharacterized protein LOC102588626 isoform X3 [Solanum tuberosum];gi|460406759|ref|XP_004248827.1|//PREDICTED: uncharacterized protein LOC101254246 [Solanum lycopersicum]
Solyc10g008240.3.1	2957	205.239866415898	499.685446422884	1.28370920786612	0.000902362090257168	Up	9.03143003380392e-06	NA	NA	NA	K13453;K13457//disease resistance protein RPM1	gi|460405421|ref|XP_004248174.1|//PREDICTED: putative late blight resistance protein homolog R1B-12 [Solanum lycopersicum]
Solyc07g006530.3.1	2565	957.739415183366	458.29525358003	-1.06335583200123	0.0179837797610394	Down	0.000355926859852757	NA	GO:0016842//amidine-lyase activity;GO:0070626//(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate AMP-lyase (fumarate-forming) activity;GO:0004018//N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity	GO:0044208//'de novo' AMP biosynthetic process;GO:0051262//protein tetramerization;GO:0009168//purine ribonucleoside monophosphate biosynthetic process;GO:0006189//'de novo' IMP biosynthetic process	K01756//adenylosuccinate lyase [EC:4.3.2.2]	gi|698570342|ref|XP_009774577.1|//PREDICTED: adenylosuccinate lyase-like [Nicotiana sylvestris];gi|460394136|ref|XP_004242661.1|//PREDICTED: adenylosuccinate lyase-like [Solanum lycopersicum]
Solyc09g011560.2.1	1043	5.78560019086661	244.790026817047	5.40293434056945	5.39195145640509e-13	Up	1.27814629850442e-15	NA	NA	NA	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|460401759|ref|XP_004246384.1|//PREDICTED: probable glutathione S-transferase [Solanum lycopersicum]
Solyc12g042800.2.1	1078	255.717198708593	20.9976984540468	-3.60624608615202	2.57469597013151e-09	Down	8.62203940782272e-12	NA	NA	NA	NA	gi|723726297|ref|XP_010325663.1|//PREDICTED: coiled-coil domain-containing protein 18 [Solanum lycopersicum]
Solyc05g053550.3.1	1334	10582.0449778948	638.547684543501	-4.05068028522124	1.34264866631995e-15	Down	2.72803657227217e-18	NA	GO:0016747//transferase activity, transferring acyl groups other than amino-acyl groups	GO:0009699//phenylpropanoid biosynthetic process	K00660//chalcone synthase [EC:2.3.1.74]	gi|922304303|ref|NP_001234036.2|//chalcone synthase 2 [Solanum lycopersicum]
Solyc01g111275.1.1	757	49.7699642648374	195.641620515015	1.97486606353156	0.00241822822580128	Up	2.86616958696393e-05	NA	NA	NA	K09250//cellular nucleic acid-binding protein;K18754//protein lin-28	gi|460370351|ref|XP_004231016.1|//PREDICTED: glycine-rich protein 2-like [Solanum lycopersicum];gi|971572600|ref|XP_015170000.1|//PREDICTED: glycine-rich protein 2-like [Solanum tuberosum]
Solyc07g007800.3.1	1891	402.969600235285	989.983882882691	1.29673403116415	0.0475791055521895	Up	0.00133730638700702	NA	NA	NA	K07297//adiponectin receptor	gi|460394321|ref|XP_004242752.1|//PREDICTED: heptahelical transmembrane protein 1 [Solanum lycopersicum]
Solyc05g052270.2.1	1840	674.752168784351	1543.93991999175	1.19418699956229	0.0108669699141014	Up	0.000182363268303015	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process;GO:0023052//signaling	K07198//5'-AMP-activated protein kinase, catalytic alpha subunit [EC:2.7.11.11]	gi|525313892|ref|NP_001265903.1|//CBL-interacting protein kinase [Solanum lycopersicum]
Solyc03g115380.2.1	1898	960.782505945495	121.751773964273	-2.98026708948878	0.00114486105410456	Down	1.18892896464183e-05	NA	GO:0016616//oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;GO:0000166//nucleotide binding;GO:0003979//UDP-glucose 6-dehydrogenase activity;GO:0051287//NAD binding	GO:0008152//metabolic process;GO:0055114//oxidation-reduction process	K00012//UDPglucose 6-dehydrogenase [EC:1.1.1.22]	gi|460380492|ref|XP_004235990.1|//PREDICTED: UDP-glucose 6-dehydrogenase 1-like [Solanum lycopersicum];gi|697152079|ref|XP_009630273.1|//PREDICTED: UDP-glucose 6-dehydrogenase 5-like [Nicotiana tomentosiformis]
Solyc12g005400.2.1	2064	5171.77633270845	2545.60853711359	-1.02264930419104	0.0152753460274257	Down	0.000283490098298088	NA	NA	NA	K05391//cyclic nucleotide gated channel, other eukaryote	gi|460412202|ref|XP_004251491.1|//PREDICTED: cyclic nucleotide-gated ion channel 4 [Solanum lycopersicum]
Solyc04g051660.3.1	1118	701.201571429167	210.843850689975	-1.73365428356199	0.0341696526847731	Down	0.000828162902532585	NA	NA	NA	K02918//large subunit ribosomal protein L35e	gi|460383521|ref|XP_004237470.1|//PREDICTED: uncharacterized protein LOC101259237 [Solanum lycopersicum]
Solyc06g062520.1.1	579	95.4845891916652	242.662325140529	1.34561032617379	0.00761062743576564	Up	0.000116262736159869	NA	NA	NA	K16222//Dof zinc finger protein DOF5.5	gi|460392677|ref|XP_004241941.1|//PREDICTED: dof zinc finger protein DOF3.1-like [Solanum lycopersicum]
Solyc03g121090.3.1	2067	970.350512606196	4230.976960345	2.12441294884692	0.0356679786640509	Up	0.000877708471471169	NA	NA	NA	NA	gi|460379781|ref|XP_004235639.1|//PREDICTED: uncharacterized protein LOC101254072 [Solanum lycopersicum]
Solyc11g018850.1.1	2052	34.9842635819407	174.868531401499	2.32149266295965	6.25823019836992e-06	Up	3.69696407097896e-08	NA	NA	NA	K01051//pectinesterase [EC:3.1.1.11]	gi|970054842|ref|XP_015089065.1|//PREDICTED: uncharacterized protein LOC107032025 [Solanum pennellii];gi|723742795|ref|XP_010312851.1|//PREDICTED: uncharacterized protein LOC101247089 [Solanum lycopersicum]
Solyc09g010566.1.1	1266	1.9515732992054	22.8014991690122	3.54641912769983	0.000235963814666227	Up	1.9088768541686e-06	NA	NA	NA	NA	gi|723727530|ref|XP_004246876.2|//PREDICTED: uncharacterized protein LOC101256621 [Solanum lycopersicum]
Solyc12g056600.3.1	1118	859.390209518491	129.585319849831	-2.72941105059406	1.54608212512597e-05	Down	9.83135339377238e-08	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K09841//xanthoxin dehydrogenase [EC:1.1.1.288]	gi|982742413|ref|NP_001238797.2|//short-chain dehydrogenase-reductase [Solanum lycopersicum]
Solyc06g051140.3.1	2972	6.82193080444748	829.098674647628	6.92521988152018	1.69465466534493e-43	Up	3.8258373752002e-47	NA	NA	NA	K00278//L-aspartate oxidase [EC:1.4.3.16];K10581//ubiquitin-conjugating enzyme E2 O [EC:2.3.2.24]	gi|698465802|ref|XP_009782760.1|//PREDICTED: probable ubiquitin-conjugating enzyme E2 23 [Nicotiana sylvestris];gi|460381606|ref|XP_004236539.1|//PREDICTED: putative pentatricopeptide repeat-containing protein At1g64310 [Solanum lycopersicum];gi|723666410|ref|XP_010315388.1|//PREDICTED: probable ubiquitin-conjugating enzyme E2 23 isoform X2 [Solanum lycopersicum];gi|723666392|ref|XP_010315382.1|//PREDICTED: probable ubiquitin-conjugating enzyme E2 23 isoform X1 [Solanum lycopersicum]
Solyc09g010680.3.1	2005	371.38072433781	812.82078720667	1.13003836084268	0.0278058701143837	Up	0.00061832672000605	NA	NA	NA	K16222//Dof zinc finger protein DOF5.5	gi|460401853|ref|XP_004246430.1|//PREDICTED: dof zinc finger protein DOF2.4 [Solanum lycopersicum]
Solyc02g084250.3.1	2412	7.64559219696124	147.27320518639	4.26772290951055	1.61792594010083e-15	Up	3.34823067710974e-18	NA	NA	NA	K08739//DNA mismatch repair protein MLH3	gi|723673080|ref|XP_010316474.1|//PREDICTED: DNA mismatch repair protein MLH3 isoform X3 [Solanum lycopersicum];gi|971539165|ref|XP_015160674.1|//PREDICTED: DNA mismatch repair protein MLH3 isoform X9 [Solanum tuberosum];gi|971539159|ref|XP_015160667.1|//PREDICTED: DNA mismatch repair protein MLH3 isoform X7 [Solanum tuberosum]
Solyc07g065500.2.1	1086	921.432035431474	4202.63134171082	2.18934324552954	0.00210445281787997	Up	2.38162891281688e-05	NA	NA	NA	K08065//nuclear transcription Y subunit beta	gi|460397021|ref|XP_004244067.1|//PREDICTED: nuclear transcription factor Y subunit B-3-like [Solanum lycopersicum]
Solyc05g051900.3.1	1829	311.173738949998	817.967574635974	1.39432334254171	0.00232244217636827	Up	2.73516349175328e-05	NA	NA	NA	K08193//MFS transporter, ACS family, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), other;K13783//MFS transporter, OPA family, solute carrier family 37 (glycerol-3-phosphate transporter), member 1/2	gi|698510019|ref|XP_009800196.1|//PREDICTED: uncharacterized protein LOC104246138 isoform X1 [Nicotiana sylvestris];gi|460388672|ref|XP_004239990.1|//PREDICTED: uncharacterized protein LOC101247024 [Solanum lycopersicum]
Solyc11g017373.1.1	1664	2.00434781051667	19.1338330696635	3.25492113350599	0.00147844885083143	Up	1.57986030641579e-05	NA	NA	NA	K12448//UDP-arabinose 4-epimerase [EC:5.1.3.5]	gi|723678370|ref|XP_010317364.1|//PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Solanum lycopersicum];gi|970045743|ref|XP_015084351.1|//PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Solanum pennellii]
Solyc06g008220.3.1	1338	2671.54543449405	1041.00186479383	-1.35970190002046	0.00214996598807394	Down	2.47319098508424e-05	NA	NA	NA	K00655//1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51];K00434//L-ascorbate peroxidase [EC:1.11.1.11]	gi|460389688|ref|XP_004240482.1|//PREDICTED: DAG protein, chloroplastic-like [Solanum lycopersicum]
Solyc10g074440.2.1	1143	33.9415185274149	545.600525093557	4.00672201590469	1.02281495976268e-06	Up	5.19547050336611e-09	GO:0043231//intracellular membrane-bounded organelle;GO:0030312//external encapsulating structure	GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0030247//polysaccharide binding	GO:0033554//cellular response to stress;GO:0006026//aminoglycan catabolic process	K20547;K01183//chitinase [EC:3.2.1.14]	gi|460407111|ref|XP_004249000.1|//PREDICTED: endochitinase [Solanum lycopersicum]
Solyc06g075370.3.1	1118	152.006432021252	399.622016025284	1.39450369509397	0.0176306387423207	Up	0.000344957374647506	NA	NA	NA	K16222//Dof zinc finger protein DOF5.5	gi|460391308|ref|XP_004241265.1|//PREDICTED: dof zinc finger protein DOF2.1 [Solanum lycopersicum]
Solyc02g037550.3.1	1441	492.640661165801	141.924993626589	-1.79540703189067	0.0461189711002589	Down	0.00127636134548867	NA	NA	NA	K07088//uncharacterized protein	gi|460371622|ref|XP_004231634.1|//PREDICTED: uncharacterized protein LOC101264385 [Solanum lycopersicum]
Solyc03g116830.3.1	4065	168.070740889168	638.808079930345	1.92631397027824	1.9571850677643e-06	Up	1.07517409750381e-08	NA	NA	NA	K03106//signal recognition particle subunit SRP54 [EC:3.6.5.4]	gi|723686471|ref|XP_010318754.1|//PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101255783 [Solanum lycopersicum]
Solyc10g007840.3.1	2377	1635.27173546338	778.516566570581	-1.07073074555169	0.0116873198121705	Down	0.000200967195475859	NA	GO:0016884//carbon-nitrogen ligase activity, with glutamine as amido-N-donor	GO:0010467//gene expression	K02433//aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]	gi|460405481|ref|XP_004248204.1|//PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial [Solanum lycopersicum]
Solyc05g025900.3.1	1329	1379.39045149719	2813.14022572573	1.02815058280526	0.0496169157158679	Up	0.00140523051793683	NA	NA	NA	NA	gi|460387306|ref|XP_004239320.1|//PREDICTED: uncharacterized protein LOC101263316 [Solanum lycopersicum]
Solyc01g008160.3.1	462	261.501771562608	107.492649532362	-1.2825827100603	0.0172194048168379	Down	0.000335615445502579	NA	NA	NA	K02918//large subunit ribosomal protein L35e	gi|565363642|ref|XP_006348542.1|//PREDICTED: protein SLOW GREEN 1, chloroplastic [Solanum tuberosum]
Solyc04g063245.1.1	1462	59.8395683036922	192.577715723024	1.68626909784033	0.047810258708953	Up	0.00134740127828595	NA	NA	NA	K07418;K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30]	gi|970020957|ref|XP_015071727.1|//PREDICTED: premnaspirodiene oxygenase-like [Solanum pennellii]
Solyc02g079280.3.1	1274	25.986045714	114.042529226873	2.13376291942133	0.00210445281787997	Up	2.3755524564543e-05	NA	NA	NA	K09422//myb proto-oncogene protein, plant	gi|460373979|ref|XP_004232789.1|//PREDICTED: transcription factor MYB39 [Solanum lycopersicum]
Solyc08g021820.3.1	1183	9.64466210848249	41.4038435880729	2.10196210090507	0.049455788695018	Up	0.00139749773525825	NA	NA	NA	K14484//auxin-responsive protein IAA	gi|525343032|ref|NP_001266091.1|//IAA29 [Solanum lycopersicum]
Solyc03g059150.3.1	5209	442.828274020124	1167.33202798773	1.39839572537646	0.00673499398535516	Up	0.000100640234913874	GO:0016020//membrane;GO:0031965//nuclear membrane;GO:0016021//integral component of membrane;GO:0009536//plastid	NA	GO:0006812//cation transport;GO:0006811//ion transport	NA	gi|698519603|ref|XP_009804671.1|//PREDICTED: ion channel CASTOR-like isoform X7 [Nicotiana sylvestris];gi|565350701|ref|XP_006342304.1|//PREDICTED: ion channel CASTOR-like isoform X1 [Solanum tuberosum];gi|565350703|ref|XP_006342305.1|//PREDICTED: ion channel CASTOR-like isoform X2 [Solanum tuberosum]
Solyc12g044440.2.1	1621	178.108102108759	1.88274517926235	-6.56377158451969	4.28913339163843e-23	Down	4.84155479358667e-26	NA	NA	NA	NA	gi|460413991|ref|XP_004252358.1|//PREDICTED: uncharacterized protein LOC101247991 isoform X3 [Solanum lycopersicum];gi|723751025|ref|XP_010314294.1|//PREDICTED: uncharacterized protein LOC101247991 isoform X1 [Solanum lycopersicum]
Solyc02g091180.1.1	501	43.3236322726252	5.65190518314078	-2.9383450360034	0.00332264290525673	Down	4.06313332659231e-05	NA	NA	NA	NA	gi|723670004|ref|XP_010316076.1|//PREDICTED: uncharacterized protein LOC104645686 [Solanum lycopersicum]
Solyc01g096720.3.1	1612	4.4893303043304	29.0226779344686	2.6926084914588	0.0112838491131866	Up	0.000191478971918567	NA	NA	NA	K17866//diphthamide biosynthesis protein 2;K12818//ATP-dependent RNA helicase DHX8/PRP22 [EC:3.6.4.13]	gi|723661788|ref|XP_004230048.2|//PREDICTED: protein ZINC INDUCED FACILITATOR-LIKE 1-like [Solanum lycopersicum]
Solyc08g005680.3.1	1137	76.5879478671747	11.2839254602771	-2.76284834188161	0.00132733851017717	Down	1.4133905195475e-05	GO:0009536//plastid	GO:0043169//cation binding;GO:0004659//prenyltransferase activity	NA	K18114//dimethylallylcistransferase [EC:2.5.1.28];K11778//ditrans,polycis-polyprenyl diphosphate synthase [EC:2.5.1.87]	gi|350539149|ref|NP_001234633.1|//dimethylallylcistransferase, chloroplastic [Solanum lycopersicum]
Solyc10g047090.2.1	288	499.233870845371	1656.80306157931	1.73061440139316	7.15077965757584e-05	Up	5.08521411476778e-07	GO:0030529//intracellular ribonucleoprotein complex;GO:0009536//plastid	GO:0005198//structural molecule activity;GO:0003824//catalytic activity;GO:0003676//nucleic acid binding	GO:0010467//gene expression	K02886//large subunit ribosomal protein L2	gi|991820860|gb|AMF83998.1|//ribosomal protein L2 (chloroplast) [Gynostemma pentaphyllum]
Solyc09g065120.3.1	4512	1825.57866427147	768.310831298295	-1.24859183853599	0.01492482691525	Down	0.000276292088734733	GO:0044464//cell part;GO:0016021//integral component of membrane	GO:0008320//protein transmembrane transporter activity	GO:0006810//transport;GO:0015031//protein transport	K10752//histone-binding protein RBBP4;K10956//protein transport protein SEC61 subunit alpha	gi|698484993|ref|XP_009789286.1|//PREDICTED: preprotein translocase subunit SCY2, chloroplastic [Nicotiana sylvestris];gi|460403364|ref|XP_004247161.1|//PREDICTED: preprotein translocase subunit SCY2, chloroplastic [Solanum lycopersicum]
Solyc01g098690.2.1	3101	61.6633282924687	19.9860983610379	-1.62541590129883	0.0496169157158679	Down	0.00140951843193289	NA	NA	NA	K19613//leucine-rich repeat protein SHOC2;K10406//kinesin family member C2/C3	gi|723662501|ref|XP_004231263.2|//PREDICTED: receptor-like protein 12 [Solanum lycopersicum]
Solyc10g086570.3.1	586	994.074475061843	4829.38757241856	2.2804144024221	0.000480859106151751	Up	4.39661221337531e-06	NA	GO:0005515//protein binding	NA	NA	gi|350537805|ref|NP_001234311.1|//uncharacterized protein LOC778362 [Solanum lycopersicum]
Solyc06g083800.3.1	1036	66.9942877072145	166.105603315835	1.30999074720948	0.0347590910582531	Up	0.000847495616726794	NA	NA	NA	NA	gi|970034898|ref|XP_015078779.1|//PREDICTED: CRIB domain-containing protein RIC6 [Solanum pennellii];gi|460393546|ref|XP_004242370.1|//PREDICTED: CRIB domain-containing protein RIC6 [Solanum lycopersicum]
Solyc01g056370.3.1	1125	2.16708385677649	474.516276089574	7.7745587822882	3.33637420872878e-37	Up	1.63196992563021e-40	NA	NA	NA	NA	NA
Solyc12g077370.2.1	1464	3.11461996038383	24.6774275384764	2.98606396636347	0.00636444855640083	Up	9.17539683286345e-05	NA	NA	NA	K07198//5'-AMP-activated protein kinase, catalytic alpha subunit [EC:2.7.11.11]	gi|460414683|ref|XP_004252694.1|//PREDICTED: CBL-interacting serine/threonine-protein kinase 5-like [Solanum lycopersicum]
Solyc04g072400.3.1	3250	1997.16632467497	975.685696800731	-1.03346610175075	0.0326691899183296	Down	0.000765694181670121	NA	NA	NA	K20304//trafficking protein particle complex subunit 6	gi|460384320|ref|XP_004237860.1|//PREDICTED: uncharacterized protein At4g37920, chloroplastic [Solanum lycopersicum]
Solyc09g090990.2.1	775	68.1224191133512	11.7540622240614	-2.53497022700515	0.0104946431420578	Down	0.000174930462878865	NA	NA	GO:0006950//response to stress	K14496//abscisic acid receptor PYR/PYL family	gi|2887310|emb|CAA75803.1|//TSI-1 protein [Solanum lycopersicum]
Solyc09g092110.3.1	471	337.757457503826	1910.19075293129	2.49965718500111	0.000591980134312309	Up	5.590812119968e-06	NA	NA	NA	K12198//charged multivesicular body protein 5	gi|460404800|ref|XP_004247868.1|//PREDICTED: light-regulated protein [Solanum lycopersicum]
Solyc12g044200.2.1	5035	401.072798820163	71.0477261721646	-2.49700374139809	1.52629681828905e-06	Down	8.04009310909687e-09	NA	NA	NA	K13459//disease resistance protein RPS2	gi|723750945|ref|XP_004252495.2|//PREDICTED: probable disease resistance protein At1g61180 [Solanum lycopersicum]
Solyc10g012210.2.1	2447	140.060783958787	2.05707862671472	-6.0893123192024	3.03477311146312e-18	Down	4.79589384360353e-21	NA	NA	NA	K02470//DNA gyrase subunit B [EC:5.99.1.3]	gi|460405936|ref|XP_004248430.1|//PREDICTED: AT-rich interactive domain-containing protein 1-like [Solanum lycopersicum]
Solyc11g020180.2.1	3018	807.825854901216	61.7920152840077	-3.70855198965237	4.19828545415156e-17	Down	7.42444280186339e-20	NA	NA	NA	K14318//nuclear pore complex protein Nup88	gi|460410379|ref|XP_004250607.1|//PREDICTED: uncharacterized protein LOC101248262 [Solanum lycopersicum]
Solyc01g015050.1.1	285	2.28999326073518	16.0841458664496	2.81222406734517	0.0130835226254001	Up	0.0002338365220704	NA	NA	NA	NA	gi|970037656|ref|XP_015080174.1|//PREDICTED: factor of DNA methylation 4-like [Solanum pennellii]
Solyc10g009080.3.1	734	172.78676516738	637.101788489264	1.8825311708387	0.0271261587226744	Up	0.000601170466480612	NA	GO:0005488//binding	NA	K20641;K13415//protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1]	gi|460405288|ref|XP_004248108.1|//PREDICTED: squamosa promoter-binding protein 1-like [Solanum lycopersicum]
Solyc09g011080.3.1	1626	12407.0600854894	4865.55351785	-1.35048545806412	0.00214996598807394	Down	2.47540953587924e-05	GO:0009532//plastid stroma;GO:0009570//chloroplast stroma	GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding	NA	K14571//ribosome biogenesis ATPase	gi|723727338|ref|XP_010325843.1|//PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic isoform X2 [Solanum lycopersicum];gi|970053203|ref|XP_015088235.1|//PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic isoform X1 [Solanum pennellii]
Solyc09g015030.1.1	219	1.79764387756136	35.9342297406464	4.32117961284475	2.80650294306371e-07	Up	1.27774713515712e-09	NA	NA	NA	NA	NA
Solyc05g043410.1.1	2305	304.919366301073	3.15417938455072	-6.59501926127892	3.95687122415579e-26	Down	3.8709655652651e-29	NA	NA	NA	K10875//DNA repair and recombination protein RAD54 and RAD54-like protein [EC:3.6.4.-]	gi|723726394|ref|XP_010325684.1|//PREDICTED: SNF2 domain-containing protein CLASSY 4-like [Solanum lycopersicum]
Solyc04g063360.3.1	3815	2377.5525155521	1144.88931067564	-1.05426908427912	0.0322994246119874	Down	0.000753495250006856	GO:0009941//chloroplast envelope	GO:0005524//ATP binding	GO:0009793//embryo development ending in seed dormancy	K03798//cell division protease FtsH [EC:3.4.24.-]	gi|460384008|ref|XP_004237707.1|//PREDICTED: ATP-dependent zinc metalloprotease FtsH [Solanum lycopersicum];gi|565379852|ref|XP_006356331.1|//PREDICTED: probable inactive ATP-dependent zinc metalloprotease FTSHI 4, chloroplastic isoform X1 [Solanum tuberosum]
Solyc07g062930.3.1	1515	429.271454133371	170.393840612657	-1.33301705301367	0.0279078854022857	Down	0.00062164533838105	NA	NA	NA	NA	gi|460397376|ref|XP_004244243.1|//PREDICTED: uncharacterized protein LOC101259352 [Solanum lycopersicum]
Solyc03g093110.3.1	1226	304.897287086523	40.8489332842386	-2.89995300369413	0.000985386018947885	Down	1.00343234359346e-05	GO:0048046//apoplast;GO:0005618//cell wall;GO:0030312//external encapsulating structure;GO:0005576//extracellular region	GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0016762//xyloglucan:xyloglucosyl transferase activity;GO:0016758//transferase activity, transferring hexosyl groups;GO:0016798//hydrolase activity, acting on glycosyl bonds	GO:0010411//xyloglucan metabolic process;GO:0042546//cell wall biogenesis;GO:0071555//cell wall organization;GO:0044042//glucan metabolic process	K08235//xyloglucan:xyloglucosyl transferase [EC:2.4.1.207]	gi|350535843|ref|NP_001234472.1|//xyloglucan endotransglucosylase-hydrolase XTH3 precursor [Solanum lycopersicum];gi|460378802|ref|XP_004235157.1|//PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 23 [Solanum lycopersicum]
Solyc05g023990.2.1	785	4.80832937629777	113.822220196469	4.5651026898261	6.89646037057634e-10	Up	2.23161226575447e-12	NA	NA	NA	K08286//protein-serine/threonine kinase [EC:2.7.11.-];K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|970063328|ref|XP_015058591.1|//PREDICTED: receptor-like protein kinase HAIKU2 isoform X2 [Solanum pennellii];gi|970063326|ref|XP_015058589.1|//PREDICTED: receptor-like protein kinase HAIKU2 isoform X1 [Solanum pennellii]
Solyc05g006130.3.1	1994	809.129700716569	392.521651698395	-1.04359874425265	0.0259888374740704	Down	0.000566186435545274	NA	GO:0017111//nucleoside-triphosphatase activity;GO:0005488//binding	NA	K11594//ATP-dependent RNA helicase DDX3X [EC:3.6.4.13];K12858//ATP-dependent RNA helicase DDX23/PRP28 [EC:3.6.4.13];K14805//ATP-dependent RNA helicase DDX24/MAK5 [EC:3.6.4.13]	gi|460386046|ref|XP_004238711.1|//PREDICTED: DEAD-box ATP-dependent RNA helicase 22 [Solanum lycopersicum]
Solyc01g066613.1.1	3874	1770.84916321051	11.0852897424323	-7.31965104248178	1.60147809515081e-65	Down	1.20516092497333e-69	NA	NA	NA	K07466//replication factor A1;K15255//ATP-dependent DNA helicase PIF1 [EC:3.6.4.12]	gi|723726857|ref|XP_010325772.1|//PREDICTED: uncharacterized protein LOC101258482 [Solanum lycopersicum];gi|971570010|ref|XP_015169312.1|//PREDICTED: uncharacterized protein LOC107062781 [Solanum tuberosum]
Solyc03g097030.3.1	2256	995.180418055504	283.98793588715	-1.80912845436204	5.35898640180307e-05	Down	3.66984808341107e-07	NA	GO:0016703//oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)	GO:0008152//metabolic process	K01904//4-coumarate--CoA ligase [EC:6.2.1.12]	gi|460379083|ref|XP_004235294.1|//PREDICTED: 4-coumarate--CoA ligase 2 [Solanum lycopersicum]
Solyc09g011030.3.1	2414	872.025659096896	1998.40496499534	1.19640647479468	0.0233772606673493	Up	0.000497856399808846	NA	NA	NA	K09562//hsp70-interacting protein	gi|460401839|ref|XP_004246423.1|//PREDICTED: hsp70-binding protein 1 [Solanum lycopersicum]
Solyc04g008950.3.1	2578	59.6063611835563	304.865418819862	2.35463430507648	0.00200115683942092	Up	2.23787218692018e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K03868//RING-box protein 1	gi|970021679|ref|XP_015072112.1|//PREDICTED: putative GEM-like protein 8 [Solanum pennellii]
Solyc07g032670.2.1	1243	53.4375653699489	10.4534472288251	-2.35387550203421	0.0101138875955148	Down	0.000166231602707069	NA	NA	NA	NA	gi|565403999|ref|XP_006367438.1|//PREDICTED: uncharacterized protein LOC102587704 [Solanum tuberosum]
Solyc01g111570.3.1	3117	946.434908521284	320.633258543364	-1.56157920669162	0.0440677864104853	Down	0.00119218641792298	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723666367|ref|XP_010315381.1|//PREDICTED: probable receptor-like serine/threonine-protein kinase At5g57670 [Solanum lycopersicum]
Solyc07g041920.3.1	3242	29234.3161421059	2244.88272214234	-3.70295086142935	3.48310091108712e-18	Down	5.63544941779532e-21	GO:0043231//intracellular membrane-bounded organelle	GO:0004175//endopeptidase activity	GO:0019538//protein metabolic process	K01366//cathepsin H [EC:3.4.22.16]	gi|460396286|ref|XP_004243707.1|//PREDICTED: cysteine proteinase 3-like [Solanum lycopersicum]
Solyc04g082210.3.1	2639	171.565601492771	381.806114320189	1.15407988173202	0.0217863271380557	Up	0.000452498497957134	GO:0016020//membrane	NA	NA	K19476//vacuolar protein sorting-associated protein IST1;K14209//solute carrier family 36 (proton-coupled amino acid transporter)	gi|723696230|ref|XP_004238627.2|//PREDICTED: lysine histidine transporter-like 8 [Solanum lycopersicum]
Solyc08g080710.2.1	1167	3.90902694399447	29.0163595187281	2.89198509189468	0.00373716218930294	Up	4.8090810427874e-05	NA	NA	NA	K05609//ubiquitin carboxyl-terminal hydrolase L3 [EC:3.4.19.12]	gi|970045859|ref|XP_015084415.1|//PREDICTED: uncharacterized protein LOC107027883 [Solanum pennellii]
Solyc04g081670.3.1	10106	308.815220891246	671.51399490718	1.12067360498157	0.0339402477683006	Up	0.000813483005170165	NA	GO:0004175//endopeptidase activity	GO:0019538//protein metabolic process	K01369//legumain [EC:3.4.22.34];K05868//cyclin B	gi|170676258|gb|ACB30368.1|//vascular processing enzyme-3 [Capsicum annuum];gi|565350348|ref|XP_006342132.1|//PREDICTED: G2/mitotic-specific cyclin-2-like [Solanum tuberosum]
Solyc11g021360.2.1	1835	72.7356404847742	206.04371185258	1.50221607188968	0.00929376173360876	Up	0.000147919675407928	NA	NA	NA	NA	gi|460390052|ref|XP_004240656.1|//PREDICTED: uncharacterized protein LOC101250021 [Solanum lycopersicum]
Solyc09g090350.3.1	2465	130.712586049115	48.1302520688759	-1.44138217784228	0.0202976852425141	Down	0.000409359946193609	NA	NA	NA	K17756//long-chain-alcohol oxidase [EC:1.1.3.20]	gi|460404552|ref|XP_004247745.1|//PREDICTED: long-chain-alcohol oxidase FAO1 [Solanum lycopersicum]
Solyc04g078840.3.1	3193	716.314519077098	2028.7971678024	1.50195954694885	0.0350074782906927	Up	0.000856417532226372	GO:0043231//intracellular membrane-bounded organelle	GO:0003677//DNA binding;GO:0005515//protein binding;GO:0043565//sequence-specific DNA binding;GO:0003700//transcription factor activity, sequence-specific DNA binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0009738//abscisic acid-activated signaling pathway;GO:0009414//response to water deprivation;GO:0006355//regulation of transcription, DNA-templated;GO:0009651//response to salt stress;GO:0006351//transcription, DNA-templated	K14432//ABA responsive element binding factor	gi|350538377|ref|NP_001234596.1|//AREB-like protein [Solanum lycopersicum]
Solyc04g080270.3.1	5244	197.142415965054	450.151174790682	1.19117137348104	0.0100063417586341	Up	0.000163779157354323	NA	NA	NA	NA	gi|460385826|ref|XP_004238602.1|//PREDICTED: uncharacterized protein LOC101268101 [Solanum lycopersicum]
Solyc04g081610.1.1	567	650.385357037048	2.8568100356596	-7.8307458592277	8.29268849687187e-40	Down	3.43227502974717e-43	NA	NA	NA	NA	gi|970022990|ref|XP_015072832.1|//PREDICTED: uncharacterized protein LOC107017067 [Solanum pennellii]
Solyc00g020020.2.1	859	141.472925529646	29.8228277143143	-2.24603702140661	0.0341696526847731	Down	0.00082926688421111	GO:0043231//intracellular membrane-bounded organelle	NA	NA	NA	gi|763742283|gb|KJB09782.1|//hypothetical protein B456_001G165500 [Gossypium raimondii]
Solyc08g061230.3.1	1258	14.2182148487717	52.7536444642495	1.89153042481778	0.0167289803541106	Up	0.000319446544374016	NA	NA	NA	NA	gi|460398999|ref|XP_004245033.1|//PREDICTED: epoxide hydrolase 4-like isoform X1 [Solanum lycopersicum]
BGI_novel_G000107	1118	14.0950575362673	2.26634649443743	-2.63674901488074	0.0263160313001665	Down	0.000578047464534182	NA	NA	NA	K10268//F-box and leucine-rich repeat protein 2/20	gi|970007879|ref|XP_015064855.1|//PREDICTED: uncharacterized protein LOC107010111 [Solanum pennellii]
Solyc09g010740.3.1	1582	2.12913176573125	196.528414135041	6.52832886588041	2.27724986848915e-22	Up	2.82760453249585e-25	NA	NA	NA	K14826//FK506-binding nuclear protein [EC:5.2.1.8]	gi|460401885|ref|XP_004246446.1|//PREDICTED: uncharacterized protein LOC101259474 [Solanum lycopersicum]
Solyc02g031920.3.1	1088	59.8302708994987	13.1369923959085	-2.18724057469347	0.0103783069759888	Down	0.000171819809212292	NA	NA	NA	NA	gi|460371526|ref|XP_004231587.1|//PREDICTED: pathogen-related protein-like [Solanum lycopersicum]
Solyc01g007000.3.1	1475	136.030284338828	32.4397346630874	-2.06809394918108	0.0231175801993562	Down	0.000491456252121618	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K10260//F-box and WD-40 domain protein 7;K01876//aspartyl-tRNA synthetase [EC:6.1.1.12];K08332//vacuolar protein 8	gi|460365615|ref|XP_004228696.1|//PREDICTED: E3 ubiquitin-protein ligase PUB22-like [Solanum lycopersicum]
Solyc07g055490.3.1	1693	17.6919557727227	2.21879130125403	-2.99524766119893	0.00441019137405743	Down	5.86916683129055e-05	NA	NA	NA	K07428//cytochrome P450, family 4, subfamily X [EC:1.14.14.1];K07426//cytochrome P450, family 4, subfamily B, polypeptide 1 [EC:1.14.14.1]	gi|460395372|ref|XP_004243257.1|//PREDICTED: cytochrome P450 CYP72A219-like [Solanum lycopersicum]
Solyc06g007180.3.1	2413	65.7909153666489	400.952771102913	2.6074720186398	0.00659425558063047	Up	9.72626025362962e-05	NA	NA	NA	K01953//asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]	gi|1000232056|ref|NP_001306778.1|//asparagine synthetase [Solanum lycopersicum]
Solyc10g055780.1.1	889	169.58314989574	494.57597469734	1.5441993307005	0.0177992922092402	Up	0.000350266389187367	GO:0043231//intracellular membrane-bounded organelle;GO:0005618//cell wall;GO:0030312//external encapsulating structure;GO:0005576//extracellular region;GO:0005773//vacuole	GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0008061//chitin binding;GO:0030247//polysaccharide binding;GO:0004568//chitinase activity	GO:0033554//cellular response to stress;GO:0009626//plant-type hypersensitive response;GO:0006032//chitin catabolic process;GO:0016998//cell wall macromolecule catabolic process;GO:0000272//polysaccharide catabolic process;GO:0006026//aminoglycan catabolic process;GO:0009607//response to biotic stimulus	K20547;K01183//chitinase [EC:3.2.1.14]	gi|460406368|ref|XP_004248637.1|//PREDICTED: endochitinase 4 [Solanum lycopersicum]
Solyc06g006040.2.1	3231	116.786159636774	745.724003492032	2.67477246986573	0.000434238489462928	Up	3.87231523507973e-06	NA	NA	NA	K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|460389978|ref|XP_004240621.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Solanum lycopersicum]
Solyc03g025810.3.1	2059	1.5385531406262	9.38364906383444	2.60857478519159	0.0287964671954239	Up	0.000649397769083211	NA	NA	NA	NA	gi|460377332|ref|XP_004234447.1|//PREDICTED: low-temperature-induced 65 kDa protein-like [Solanum lycopersicum]
Solyc08g015960.3.1	1363	2100.90186117495	1034.37549485213	-1.02224876927105	0.00611609739733518	Down	8.74484332688929e-05	NA	NA	NA	K15437//aminoacyl tRNA synthase complex-interacting multifunctional protein 1	gi|460398484|ref|XP_004244789.1|//PREDICTED: aminoacyl tRNA synthase complex-interacting multifunctional protein 1 [Solanum lycopersicum]
Solyc02g093230.3.1	1999	458.802483868875	150.099352889037	-1.61195544464999	0.0127921457202257	Down	0.000226222240603006	NA	GO:0043169//cation binding;GO:0046872//metal ion binding;GO:0008171//O-methyltransferase activity;GO:0042409//caffeoyl-CoA O-methyltransferase activity	GO:0009699//phenylpropanoid biosynthetic process;GO:0009809//lignin biosynthetic process;GO:0006730//one-carbon metabolic process;GO:0032259//methylation	K00588//caffeoyl-CoA O-methyltransferase [EC:2.1.1.104]	gi|460372071|ref|XP_004231857.1|//PREDICTED: caffeoyl-CoA O-methyltransferase-like [Solanum lycopersicum]
Solyc06g066420.3.1	976	105.161753090491	1018.29145700611	3.27546854828439	0.000147563444835697	Up	1.11795726109625e-06	NA	NA	NA	NA	gi|723709361|ref|XP_004241752.2|//PREDICTED: uncharacterized protein LOC101254600 [Solanum lycopersicum]
Solyc03g025927.1.1	610	7.98346613287756	75.2079834890162	3.23579866151638	0.000245313429506566	Up	2.02089671096865e-06	NA	NA	NA	K17278//membrane-associated progesterone receptor component	gi|723679557|ref|XP_010317593.1|//PREDICTED: uncharacterized protein LOC101247404 isoform X2 [Solanum lycopersicum];gi|723679554|ref|XP_010317592.1|//PREDICTED: uncharacterized protein LOC101247404 isoform X1 [Solanum lycopersicum]
Solyc07g018144.1.1	1578	3.40763246940906	111.679726590619	5.03445376258165	4.00054719273571e-12	Up	1.02358132635748e-14	NA	NA	NA	K00430//peroxidase [EC:1.11.1.7];K17086//transmembrane 9 superfamily member 2/4;K14808//ATP-dependent RNA helicase DDX54/DBP10 [EC:3.6.4.13];K11275//histone H1/5;K01051//pectinesterase [EC:3.1.1.11]	gi|723721428|ref|XP_010324936.1|//PREDICTED: WW domain-binding protein 11-like [Solanum lycopersicum]
Solyc09g092330.2.1	1347	1974.01098390185	4801.44059237777	1.28233731008955	0.0255290144256997	Up	0.00055136600370063	NA	NA	NA	K08679//UDP-glucuronate 4-epimerase [EC:5.1.3.6]	gi|460404830|ref|XP_004247883.1|//PREDICTED: UDP-glucuronate 4-epimerase 6 [Solanum lycopersicum]
Solyc05g009840.3.1	1778	520.585013226926	1047.30917062759	1.00848171088093	0.0204348801279338	Up	0.000415054793748488	NA	GO:0003676//nucleic acid binding	NA	NA	gi|460386560|ref|XP_004238966.1|//PREDICTED: NAC domain-containing protein 8 [Solanum lycopersicum]
BGI_novel_G000051	2322	2.68559793353686	175.535957496496	6.03037944602184	4.33186169228662e-17	Up	7.82365809646529e-20	NA	NA	NA	NA	NA
Solyc12g096810.2.1	2901	311.339007818495	41.2694279959572	-2.91534099660645	0.00035760044164722	Down	3.08125451093853e-06	NA	NA	NA	K17800//LETM1 and EF-hand domain-containing protein 1, mitochondrial	gi|723753341|ref|XP_010314779.1|//PREDICTED: LETM1 and EF-hand domain-containing protein 1, mitochondrial-like isoform X1 [Solanum lycopersicum];gi|723753347|ref|XP_010314781.1|//PREDICTED: LETM1 and EF-hand domain-containing protein 1, mitochondrial-like isoform X2 [Solanum lycopersicum]
Solyc06g007110.3.1	3347	1105.79267122584	2219.24003782786	1.00498480580825	0.0454380386679853	Up	0.00125490162103703	NA	NA	NA	K08740//DNA mismatch repair protein MSH4	gi|460389522|ref|XP_004240401.1|//PREDICTED: uncharacterized protein LOC101265645 [Solanum lycopersicum]
Solyc10g006400.3.1	1869	3163.35517129703	1520.62481193237	-1.05679130935255	0.0326691899183296	Down	0.000767038210070274	NA	NA	NA	K01696//tryptophan synthase beta chain [EC:4.2.1.20]	gi|460405699|ref|XP_004248313.1|//PREDICTED: tryptophan synthase beta chain 1 [Solanum lycopersicum]
Solyc09g014590.3.1	969	251.678645241972	12.5304992483478	-4.32806700830384	1.55876967359527e-07	Down	6.74487385571947e-10	NA	NA	NA	K20718;K01188//beta-glucosidase [EC:3.2.1.21];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|723726987|ref|XP_010325793.1|//PREDICTED: LOW QUALITY PROTEIN: polygalacturonase inhibitor 2-like [Solanum lycopersicum]
Solyc05g016180.3.1	3559	34.7266427411982	146.692100722145	2.07867633736462	0.000194078651450252	Up	1.51161834857968e-06	NA	NA	NA	K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|971578596|ref|XP_015158764.1|//PREDICTED: uncharacterized protein LOC107058020 [Solanum tuberosum]
Solyc10g086780.2.1	2111	3.38391627293858	675.256450572215	7.64059783351568	6.0833232618384e-40	Up	2.28894279333198e-43	NA	NA	NA	K05278//flavonol synthase [EC:1.14.11.23]	gi|723740026|ref|XP_010312366.1|//PREDICTED: codeine O-demethylase-like [Solanum lycopersicum]
Solyc02g083250.3.1	1072	968.063639144034	3554.55605684783	1.87649559049179	0.00200115683942092	Up	2.24383767222573e-05	NA	NA	NA	K18470//Rho GTPase-activating protein 1	gi|460373458|ref|XP_004232536.1|//PREDICTED: ganglioside-induced differentiation-associated protein 2 [Solanum lycopersicum]
Solyc07g052135.1.1	1228	24.5436173714847	4.64782761022774	-2.4007194321787	0.0356876294354134	Down	0.000879534833886284	NA	NA	NA	K15803//(-)-germacrene D synthase [EC:4.2.3.22 4.2.3.75]	gi|723715797|ref|XP_004243482.2|//PREDICTED: (-)-germacrene D synthase [Solanum lycopersicum]
BGI_novel_G000015	458	15.8319010648544	2.69584061095111	-2.55402739581744	0.0220222674341183	Down	0.000459056182356983	GO:0048046//apoplast;GO:0005618//cell wall	GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0016762//xyloglucan:xyloglucosyl transferase activity	GO:0010411//xyloglucan metabolic process;GO:0042546//cell wall biogenesis;GO:0071555//cell wall organization	K08235//xyloglucan:xyloglucosyl transferase [EC:2.4.1.207]	gi|350535953|ref|NP_001234478.1|//xyloglucan endotransglucosylase-hydrolase XTH9 precursor [Solanum lycopersicum]
Solyc03g007770.3.1	2793	985.958356448106	457.796642371404	-1.10681983158221	0.0123123936693719	Down	0.000214499236245909	NA	NA	NA	K20716	gi|460376848|ref|XP_004234208.1|//PREDICTED: S-type anion channel SLAH2 [Solanum lycopersicum]
Solyc02g093890.1.1	828	14.4924739295402	75.8826337731864	2.38846586305851	0.00233732027011626	Up	2.76148009488094e-05	NA	NA	NA	NA	gi|723668992|ref|XP_010315933.1|//PREDICTED: uncharacterized protein LOC104645665 [Solanum lycopersicum]
Solyc02g070550.3.1	1767	1694.19300571917	3544.93877407267	1.06516247174812	0.00836886324742786	Up	0.000131309627654642	NA	GO:0005488//binding	NA	K15191//La-related protein 7	gi|460374638|ref|XP_004233117.1|//PREDICTED: uncharacterized protein LOC101246207 [Solanum lycopersicum];gi|460374636|ref|XP_004233116.1|//PREDICTED: la-related protein 6A [Solanum lycopersicum]
BGI_novel_G000138	3527	6.46915382563305	184.579477014121	4.83452132355924	5.47314360350428e-10	Up	1.75045041313114e-12	NA	NA	NA	NA	NA
Solyc09g014510.3.1	853	626.892801492565	179.151286590857	-1.80704035920945	0.000160171524063622	Down	1.2354728687603e-06	GO:0016020//membrane	GO:0008233//peptidase activity;GO:0008236//serine-type peptidase activity	GO:0006508//proteolysis	K09648//mitochondrial inner membrane protease subunit 2 [EC:3.4.21.-]	gi|460401642|ref|XP_004246326.1|//PREDICTED: mitochondrial inner membrane protease subunit 2 [Solanum lycopersicum]
BGI_novel_G000155	1111	19.3459401750966	115.870998678935	2.58241677199943	3.82626661744862e-06	Up	2.17393332292863e-08	NA	NA	NA	K13495//cis-zeatin O-glucosyltransferase [EC:2.4.1.215]	gi|565380170|ref|XP_006356483.1|//PREDICTED: zeatin O-glucosyltransferase-like [Solanum tuberosum]
Solyc06g008300.3.1	3651	11.3025243261583	191.397263759332	4.0818532771601	2.46002537951902e-07	Up	1.10149008602462e-09	NA	NA	NA	K10406//kinesin family member C2/C3;K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|3894387|gb|AAC78593.1|//Hcr2-0B [Solanum lycopersicum];gi|723704218|ref|XP_010321824.1|//PREDICTED: LOW QUALITY PROTEIN: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Solanum lycopersicum]
Solyc12g036793.1.1	1827	350.518719889652	4.99695409716218	-6.13229871969515	5.49952107552785e-20	Down	7.44940206641091e-23	NA	NA	NA	K19613//leucine-rich repeat protein SHOC2;K13023//carboxypeptidase N regulatory subunit;K02146//V-type H+-transporting ATPase subunit d;K10406//kinesin family member C2/C3	gi|565374551|ref|XP_006353825.1|//PREDICTED: receptor-like protein 12 [Solanum tuberosum];gi|971554571|ref|XP_015165207.1|//PREDICTED: receptor-like protein 12 [Solanum tuberosum]
Solyc08g065940.3.1	963	881.457610288868	2959.32951585207	1.74730725044957	0.0144482870386773	Up	0.000263475911813431	NA	NA	NA	K15172//transcription elongation factor SPT5;K07560//D-tyrosyl-tRNA(Tyr) deacylase [EC:3.1.-.-]	gi|460399199|ref|XP_004245129.1|//PREDICTED: zinc finger CCCH domain-containing protein 20-like [Solanum lycopersicum]
Solyc10g083440.1.1	1344	922.848744865589	235.438584332764	-1.97074343653279	3.55087892690763e-07	Down	1.65672945380045e-09	NA	GO:0035251//UDP-glucosyltransferase activity	NA	K13269//kaempferol 3-O-beta-D-galactosyltransferase [EC:2.4.1.234];K10757//flavonol 3-O-glucosyltransferase [EC:2.4.1.91];K12930//anthocyanidin 3-O-glucosyltransferase [EC:2.4.1.115]	gi|460408022|ref|XP_004249447.1|//PREDICTED: anthocyanidin 3-O-glucosyltransferase-like [Solanum lycopersicum]
Solyc03g119540.3.1	1484	1896.1742797625	4682.25048763302	1.3041105465194	0.00462841279241976	Up	6.25202314963575e-05	NA	NA	NA	K12135//zinc finger protein CONSTANS	gi|460380118|ref|XP_004235805.1|//PREDICTED: zinc finger protein CONSTANS-LIKE 16-like [Solanum lycopersicum]
Solyc02g089150.3.1	1635	90.2674261852759	28.4632829649909	-1.66510339969085	0.00553792049297348	Down	7.77230065048391e-05	NA	GO:0004620//phospholipase activity;GO:0042578//phosphoric ester hydrolase activity	GO:0007165//signal transduction;GO:0044238//primary metabolic process	NA	gi|460372646|ref|XP_004232139.1|//PREDICTED: PI-PLC X domain-containing protein At5g67130 [Solanum lycopersicum]
BGI_novel_G000170	638	202.820178392061	34.0013953985729	-2.57653533177583	0.00357983598383423	Down	4.44609663396214e-05	NA	NA	NA	K14827//pre-rRNA-processing protein IPI1;K00430//peroxidase [EC:1.11.1.7]	gi|971549389|ref|XP_015163938.1|//PREDICTED: protein app1-like [Solanum tuberosum]
Solyc01g110340.3.1	1550	183.745118070671	673.664373284703	1.87432408501693	0.000479147874068917	Up	4.36293733396087e-06	NA	NA	NA	K01179//endoglucanase [EC:3.2.1.4]	gi|460370084|ref|XP_004230884.1|//PREDICTED: endoglucanase 24-like [Solanum lycopersicum]
Solyc03g124110.2.1	867	200.688531490314	23.9517609357603	-3.06675454302121	0.000382169583517312	Down	3.32171327811638e-06	GO:0043231//intracellular membrane-bounded organelle	GO:0001071//nucleic acid binding transcription factor activity;GO:0003676//nucleic acid binding	GO:0006351//transcription, DNA-templated	K09286//EREBP-like factor	gi|460377135|ref|XP_004234350.1|//PREDICTED: dehydration-responsive element-binding protein 1A [Solanum lycopersicum]
Solyc04g008990.3.1	1234	738.086502842999	355.331410726339	-1.05462468207157	0.0288348857340231	Down	0.000652058784894754	NA	NA	NA	NA	gi|460382255|ref|XP_004236855.1|//PREDICTED: FAD synthetase 1, chloroplastic [Solanum lycopersicum]
Solyc00g019990.1.1	216	38.3150027130417	7.0384642547027	-2.44457682584598	0.0322994246119874	Down	0.000752669995072615	NA	NA	NA	NA	gi|548830281|gb|ERM93378.1|//hypothetical protein AMTR_s05716p00004100, partial [Amborella trichopoda]
Solyc09g010630.3.1	2421	26206.6506470624	67022.4169911756	1.35471073341812	0.00673499398535516	Up	0.000101365752121837	NA	GO:0032559//adenyl ribonucleotide binding;GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	GO:0008152//metabolic process;GO:0050896//response to stimulus	K03283//heat shock 70kDa protein 1/8	gi|460401797|ref|XP_004246402.1|//PREDICTED: heat shock cognate 70 kDa protein 2-like [Solanum lycopersicum]
Solyc12g087830.2.1	1242	1780.22243015459	407.810056411085	-2.12608825308747	0.0118357466842697	Down	0.00020441011882755	NA	NA	NA	K09264//MADS-box transcription factor, plant	gi|460414721|ref|XP_004252712.1|//PREDICTED: protein MADS AFFECTING FLOWERING 5-like [Solanum lycopersicum]
Solyc03g006490.3.1	1308	761.17276699313	4056.58600387639	2.41397022402849	0.00640346146117005	Up	9.32437666204918e-05	NA	NA	NA	K13783//MFS transporter, OPA family, solute carrier family 37 (glycerol-3-phosphate transporter), member 1/2	gi|807066298|ref|NP_001234039.2|//expressed predominantly in leaves [Solanum lycopersicum];gi|970013053|ref|XP_015067481.1|//PREDICTED: stem-specific protein TSJT1-like [Solanum pennellii]
Solyc03g006840.3.1	2818	346.620862414784	1325.44402206958	1.9350453465129	0.000282016628288328	Up	2.33448689556504e-06	NA	NA	NA	NA	gi|723678987|ref|XP_010317454.1|//PREDICTED: uncharacterized protein LOC101266997 [Solanum lycopersicum]
Solyc06g066380.1.1	1326	231.284440161902	101.706776668404	-1.18525240242264	0.0461838703776888	Down	0.00128888878339481	NA	NA	NA	K01074//palmitoyl-protein thioesterase [EC:3.1.2.22];K19589//release factor glutamine methyltransferase [EC:2.1.1.297];K11000//callose synthase [EC:2.4.1.-]	gi|723709374|ref|XP_010322701.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Solanum lycopersicum]
Solyc04g078340.3.1	1989	378.419037605247	10.7813691281287	-5.13337236703139	5.81536159663328e-13	Down	1.40039561344219e-15	NA	NA	NA	K00517;K07408//cytochrome P450, family 1, subfamily A, polypeptide 1 [EC:1.14.14.1]	gi|970021025|ref|XP_015071767.1|//PREDICTED: cytochrome P450 81F1-like [Solanum pennellii]
Solyc09g015470.3.1	648	111.277201536287	2.22397707948519	-5.64487231390203	1.53393669367115e-14	Down	3.2898518094313e-17	GO:0009526//plastid envelope	NA	NA	NA	gi|460401684|ref|XP_004246347.1|//PREDICTED: uncharacterized protein LOC101255724 [Solanum lycopersicum]
BGI_novel_G000447	6842	2.60993923033682	199.018134145933	6.25273986653936	5.59547575851716e-19	Up	8.42153103588389e-22	NA	NA	NA	NA	gi|970034191|ref|XP_015078408.1|//PREDICTED: uncharacterized protein LOC107022255 [Solanum pennellii]
Solyc01g014470.1.1	432	2.78068095975469	16.4824471336415	2.56742032172687	0.0204348801279338	Up	0.000415971334206726	NA	NA	NA	NA	NA
Solyc02g084090.2.1	3469	12.4375253357386	57.5680106342569	2.21056789371704	0.0102384279148128	Up	0.000168733545046017	NA	NA	NA	K03544//ATP-dependent Clp protease ATP-binding subunit ClpX	gi|723672590|ref|XP_010316415.1|//PREDICTED: uncharacterized protein LOC104645754 isoform X1 [Solanum lycopersicum];gi|723672593|ref|XP_010316416.1|//PREDICTED: uncharacterized protein LOC104645754 isoform X2 [Solanum lycopersicum]
Solyc11g013750.2.1	4115	263.419744110171	583.660346551423	1.14776557190083	0.00598657761666715	Up	8.5146041280061e-05	NA	NA	NA	K03283//heat shock 70kDa protein 1/8;K19613//leucine-rich repeat protein SHOC2;K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460410316|ref|XP_004250576.1|//PREDICTED: TMV resistance protein N-like isoform X1 [Solanum lycopersicum]
BGI_novel_G000437	7049	41.1885617497053	489.683830401671	3.5715349031522	4.45052888176501e-23	Up	5.19119521897563e-26	NA	GO:0016787//hydrolase activity	NA	K01181//endo-1,4-beta-xylanase [EC:3.2.1.8]	gi|723664953|ref|XP_010315176.1|//PREDICTED: endo-1,4-beta-xylanase C-like [Solanum lycopersicum]
Solyc11g013110.2.1	1647	9689.53906130821	2076.27780386249	-2.22242854943732	5.42997226290583e-08	Down	2.14526503218991e-10	GO:0044424//intracellular part	GO:0016701//oxidoreductase activity, acting on single donors with incorporation of molecular oxygen;GO:0016706//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;GO:0019842//vitamin binding;GO:0046914//transition metal ion binding	GO:0051553//flavone biosynthetic process	K05278//flavonol synthase [EC:1.14.11.23]	gi|460409806|ref|XP_004250329.1|//PREDICTED: flavonol synthase/flavanone 3-hydroxylase [Solanum lycopersicum]
Solyc07g052203.1.1	1116	217.148967598372	585.541323165008	1.43108589530353	0.0390472366549826	Up	0.00098584098263511	NA	NA	NA	K02184//formin 2	gi|970038445|ref|XP_015080563.1|//PREDICTED: glycine-rich cell wall structural protein 1-like isoform X1 [Solanum pennellii];gi|723715785|ref|XP_010323834.1|//PREDICTED: glycine-rich cell wall structural protein 1-like [Solanum lycopersicum]
Solyc02g090930.3.1	1726	93.6798335748574	5.05035278383278	-4.21328243933514	1.52676413104287e-06	Down	8.10000159826333e-09	NA	NA	NA	K03147//phosphomethylpyrimidine synthase [EC:4.1.99.17]	gi|460372415|ref|XP_004232026.1|//PREDICTED: uncharacterized protein LOC101267367 [Solanum lycopersicum]
Solyc07g064830.3.1	4037	728.120798368524	324.320658414572	-1.16675689680048	0.014843469528048	Down	0.000274227472561673	NA	GO:0043167//ion binding;GO:0016798//hydrolase activity, acting on glycosyl bonds	GO:0044238//primary metabolic process	K00700//1,4-alpha-glucan branching enzyme [EC:2.4.1.18]	gi|460397086|ref|XP_004244099.1|//PREDICTED: 1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic [Solanum lycopersicum]
Solyc01g099980.3.1	3496	112.523160338349	606.578995820079	2.4304735641916	1.01308050859872e-06	Up	5.06978619270909e-09	NA	NA	NA	NA	gi|723662980|ref|XP_010313233.1|//PREDICTED: uncharacterized protein LOC101261459 isoform X1 [Solanum lycopersicum];gi|460368823|ref|XP_004230264.1|//PREDICTED: uncharacterized protein LOC101261459 isoform X2 [Solanum lycopersicum]
Solyc06g067950.3.1	2214	298.665333684862	146.239004478464	-1.03020163824218	0.0320106336836507	Down	0.0007431448614521	NA	GO:0016787//hydrolase activity;GO:0003824//catalytic activity	NA	K06130//lysophospholipase II [EC:3.1.1.5]	gi|697149580|ref|XP_009629002.1|//PREDICTED: acyl-protein thioesterase 1 homolog 1 [Nicotiana tomentosiformis];gi|723709213|ref|XP_010322678.1|//PREDICTED: acyl-protein thioesterase 2-like isoform X1 [Solanum lycopersicum]
Solyc11g011980.3.1	3042	124.457553451044	412.914190397724	1.73018820812924	0.0112838491131866	Up	0.000191481956204506	NA	NA	NA	K10143//E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]	gi|460409634|ref|XP_004250243.1|//PREDICTED: E3 ubiquitin-protein ligase COP1-like isoform X1 [Solanum lycopersicum]
Solyc05g043390.2.1	4246	399.855080012686	5.03368845214179	-6.31171747952483	6.3435512089864e-32	Down	4.77371502350634e-35	NA	NA	NA	K02886//large subunit ribosomal protein L2;K00670//peptide alpha-N-acetyltransferase [EC:2.3.1.88]	gi|698477662|ref|XP_009786038.1|//PREDICTED: uncharacterized protein LOC104234204 [Nicotiana sylvestris]
Solyc01g111075.1.1	365	4187.55887405354	743.295102098919	-2.49410246724793	1.12637912858182e-06	Down	5.80629644488501e-09	GO:0030312//external encapsulating structure	NA	GO:0006950//response to stress	K03860//phosphatidylinositol glycan, class Q;K20887	gi|995970146|ref|NP_001307142.1|//snakin-2 precursor [Solanum lycopersicum]
Solyc08g044265.1.1	1708	324.618509552808	1890.45248106795	2.54191441685247	1.47792920533586e-06	Up	7.72969708927587e-09	NA	NA	NA	K15404//aldehyde decarbonylase [EC:4.1.99.5]	gi|460378168|ref|XP_004234847.1|//PREDICTED: protein ECERIFERUM 1-like [Solanum lycopersicum];gi|970017748|ref|XP_015070019.1|//PREDICTED: protein ECERIFERUM 1-like [Solanum pennellii]
Solyc01g099150.4.1	2776	284.619317003779	111.245890122623	-1.35528154232735	0.0137436404924928	Down	0.000247703043831284	GO:0005737//cytoplasm	GO:0016702//oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen;GO:0046872//metal ion binding;GO:0046914//transition metal ion binding;GO:0051213//dioxygenase activity	GO:0046394//carboxylic acid biosynthetic process;GO:0006631//fatty acid metabolic process;GO:0006633//fatty acid biosynthetic process;GO:0055114//oxidation-reduction process;GO:0031408//oxylipin biosynthetic process	K15718//linoleate 9S-lipoxygenase [EC:1.13.11.58];K01206//alpha-L-fucosidase [EC:3.2.1.51]	gi|478246969|gb|ABF19102.2|//9-lipoxygenase [Capsicum annuum];gi|460368710|ref|XP_004230208.1|//PREDICTED: desiccation-related protein PCC13-62-like [Solanum lycopersicum];gi|970002949|ref|XP_015062237.1|//PREDICTED: probable linoleate 9S-lipoxygenase 5 [Solanum pennellii];gi|568214908|ref|NP_001274916.1|//probable linoleate 9S-lipoxygenase 5 [Solanum tuberosum]
Solyc08g042050.3.1	2936	15630.8152109833	7680.95270496027	-1.02503585129066	0.00372478398720081	Down	4.76271021519043e-05	GO:0043231//intracellular membrane-bounded organelle	GO:0032559//adenyl ribonucleotide binding;GO:0046914//transition metal ion binding;GO:0042623//ATPase activity, coupled;GO:0003676//nucleic acid binding	NA	K16911//ATP-dependent RNA helicase DDX21 [EC:3.6.4.13]	gi|460398817|ref|XP_004244948.1|//PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Solanum lycopersicum]
Solyc09g092260.3.1	2466	199.630598916773	916.619831992531	2.19899062962353	0.0123180589286654	Up	0.000215984327078228	NA	NA	NA	K03686//molecular chaperone DnaJ;K09531//DnaJ homolog subfamily C member 11	gi|460404820|ref|XP_004247878.1|//PREDICTED: protein ECERIFERUM 26-like [Solanum lycopersicum]
Solyc04g008960.3.1	947	124.111034970045	529.137008169011	2.09200993007043	0.00465353321899476	Up	6.33848449891298e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K03868//RING-box protein 1	gi|460382261|ref|XP_004236858.1|//PREDICTED: putative GEM-like protein 8 [Solanum lycopersicum]
Solyc07g064370.1.1	1578	8.70752025545224	67.4914690497165	2.95437132749426	0.00577145404165428	Up	8.14348973029444e-05	NA	NA	NA	K12448//UDP-arabinose 4-epimerase [EC:5.1.3.5]	gi|723718362|ref|XP_010324319.1|//PREDICTED: uncharacterized protein LOC101267913 [Solanum lycopersicum]
BGI_novel_G000027	3519	65.6047596603142	3.69294757632924	-4.15095579908058	3.42215316596709e-06	Down	1.93145567556558e-08	NA	NA	NA	NA	gi|969996579|ref|XP_015063847.1|//PREDICTED: poly(A) polymerase I-like [Solanum pennellii]
Solyc02g011980.1.1	231	397.500185918362	920.128324535288	1.21087954367107	0.0281688508659471	Up	0.000630638005239062	GO:0030529//intracellular ribonucleoprotein complex;GO:0009536//plastid	GO:0003723//RNA binding;GO:0005198//structural molecule activity	GO:0010467//gene expression	K02892//large subunit ribosomal protein L23	gi|675895186|ref|YP_009049660.1|//hypothetical protein (mitochondrion) [Capsicum annuum]
Solyc10g086280.2.1	1420	6053.60672109179	1280.48844434561	-2.24110071849303	0.00115107394374351	Down	1.20404318155057e-05	NA	NA	NA	NA	gi|460408362|ref|XP_004249614.1|//PREDICTED: uncharacterized protein LOC101259996 [Solanum lycopersicum]
Solyc01g012580.1.1	8032	58.2534525216298	380.44235333694	2.70726240343585	5.99021922350789e-16	Up	1.17203371194044e-18	NA	NA	NA	K11592//endoribonuclease Dicer [EC:3.1.26.-]	gi|971571018|ref|XP_015169591.1|//PREDICTED: endoribonuclease Dicer homolog 2-like isoform X2 [Solanum tuberosum];gi|970036731|ref|XP_015079707.1|//PREDICTED: endoribonuclease Dicer homolog 2-like [Solanum pennellii]
Solyc09g090840.3.1	2734	1815.44319434536	866.298197267823	-1.06738616835683	0.00916275758206589	Down	0.000145489848351274	NA	GO:0016884//carbon-nitrogen ligase activity, with glutamine as amido-N-donor	GO:0010467//gene expression	K02434//aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]	gi|723732663|ref|XP_010326798.1|//PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial [Solanum lycopersicum]
Solyc01g087800.2.1	2364	176.388951950682	940.210799405035	2.41422405052684	0.0021118153051805	Up	2.4076458496809e-05	NA	GO:0004175//endopeptidase activity;GO:0005515//protein binding	GO:0044092//negative regulation of molecular function;GO:0019538//protein metabolic process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13199//plasminogen activator inhibitor 1 RNA-binding protein;K12663//Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase [EC:5.3.3.-];K01183//chitinase [EC:3.2.1.14]	gi|723660040|ref|XP_004229664.2|//PREDICTED: subtilisin-like protease [Solanum lycopersicum]
Solyc06g067980.3.1	688	96.1112349547879	293.72730196873	1.61170038019197	0.00957639922714918	Up	0.000153859445008568	NA	NA	NA	NA	gi|460392200|ref|XP_004241705.1|//PREDICTED: uncharacterized protein LOC101265833 [Solanum lycopersicum]
Solyc03g116320.3.1	1485	397.398429810411	1053.03688486706	1.40589789335019	0.0260534809273789	Up	0.000568575043755117	NA	NA	NA	K16221//transcription factor TCP21 (protein CCA1 HIKING EXPEDITION)	gi|350539944|ref|NP_001234586.1|//TCP transcription factor 16 [Solanum lycopersicum]
Solyc04g054370.1.1	498	955.494664114742	2482.96690177978	1.37774530864014	0.0220222674341183	Up	0.000458972747517046	NA	NA	NA	K16282//E3 ubiquitin-protein ligase RHA2 [EC:2.3.2.27]	gi|460383440|ref|XP_004237431.1|//PREDICTED: probable E3 ubiquitin-protein ligase XERICO [Solanum lycopersicum]
Solyc04g079020.3.1	1278	432.488941063979	3.61462335553865	-6.90267410673478	1.67356301429224e-23	Down	1.82614017437916e-26	GO:0005829//cytosol;GO:0016021//integral component of membrane	GO:0008690//3-deoxy-manno-octulosonate cytidylyltransferase activity	GO:0009103//lipopolysaccharide biosynthetic process	K00979//3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]	gi|697105535|ref|XP_009606581.1|//PREDICTED: 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial [Nicotiana tomentosiformis];gi|698428232|ref|XP_009789468.1|//PREDICTED: 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial-like [Nicotiana sylvestris]
Solyc02g036370.3.1	2182	289.147461530592	649.712455294202	1.16799592605533	0.0404530772327349	Up	0.00104920747196643	GO:0043231//intracellular membrane-bounded organelle	GO:0003676//nucleic acid binding	NA	K12133//MYB-related transcription factor LHY	gi|460371602|ref|XP_004231624.1|//PREDICTED: protein REVEILLE 1 [Solanum lycopersicum]
Solyc02g085520.3.1	4113	2601.59286795812	1201.02581060592	-1.11512805193999	0.0128998876824937	Down	0.000229098355199497	GO:0009536//plastid	GO:0016879//ligase activity, forming carbon-nitrogen bonds;GO:0046872//metal ion binding;GO:0032561//guanyl ribonucleotide binding	GO:0006163//purine nucleotide metabolic process	K01939//adenylosuccinate synthase [EC:6.3.4.4]	gi|460373155|ref|XP_004232388.1|//PREDICTED: adenylosuccinate synthetase, chloroplastic [Solanum lycopersicum];gi|970011289|ref|XP_015066552.1|//PREDICTED: adenylosuccinate synthetase, chloroplastic [Solanum pennellii]
Solyc10g083760.2.1	3052	1490.61441195711	3007.08445878799	1.01245827539446	0.0431789989340371	Up	0.00115627009348439	NA	GO:0048037//cofactor binding;GO:0016841//ammonia-lyase activity	GO:0006549//isoleucine metabolic process	K01754//threonine dehydratase [EC:4.3.1.19]	gi|970058145|ref|XP_015055759.1|//PREDICTED: threonine dehydratase biosynthetic, chloroplastic-like [Solanum pennellii];gi|350536199|ref|NP_001234234.1|//chloroplast threonine deaminase 1 precursor [Solanum lycopersicum]
Solyc12g009000.1.1	1455	403.740448853647	83.8073082416807	-2.26828016914133	0.0330820267187041	Down	0.000782954991385968	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K07936//GTP-binding nuclear protein Ran	gi|460412584|ref|XP_004251678.1|//PREDICTED: uncharacterized protein LOC101246112 [Solanum lycopersicum]
Solyc02g078460.3.1	1986	360.619129095442	739.878756906616	1.03681295053501	0.0399678662583601	Up	0.00102562684984015	NA	GO:0046914//transition metal ion binding	NA	NA	gi|460374115|ref|XP_004232857.1|//PREDICTED: E3 ubiquitin-protein ligase RNF8 isoform X2 [Solanum lycopersicum]
Solyc11g007850.2.1	5711	690.979043867404	328.167484195284	-1.07420965752867	0.0368500765489878	Down	0.000919276094065505	NA	NA	NA	NA	gi|460409184|ref|XP_004250019.1|//PREDICTED: uncharacterized protein LOC101259105 [Solanum lycopersicum]
Solyc06g065820.3.1	1055	27.593602638707	6.565282517038	-2.07140482861545	0.0327091391742262	Down	0.000770437638675004	GO:0043231//intracellular membrane-bounded organelle	GO:0001071//nucleic acid binding transcription factor activity;GO:0003676//nucleic acid binding	GO:0003006//developmental process involved in reproduction;GO:0000160//phosphorelay signal transduction system;GO:0006950//response to stress;GO:0006351//transcription, DNA-templated	K13434//pathogenesis-related genes transcriptional activator PTI6;K09286//EREBP-like factor	gi|350539962|ref|NP_001234848.1|//ethylene response factor 3-like [Solanum lycopersicum]
Solyc06g053220.3.1	1140	266.109309061736	674.901926263012	1.34265889164619	0.00195025131552224	Up	2.16474447108049e-05	NA	NA	NA	K09338//homeobox-leucine zipper protein	gi|460390726|ref|XP_004240976.1|//PREDICTED: homeobox-leucine zipper protein ATHB-12-like [Solanum lycopersicum]
Solyc05g053090.2.1	3189	444.165666286887	1104.3774186672	1.31406351145568	0.0053049862429254	Up	7.40546297973933e-05	GO:0005634//nucleus	GO:0043565//sequence-specific DNA binding;GO:0003700//transcription factor activity, sequence-specific DNA binding	GO:0006355//regulation of transcription, DNA-templated	K14494//DELLA protein	gi|460388498|ref|XP_004239904.1|//PREDICTED: scarecrow-like protein 14 [Solanum lycopersicum]
BGI_novel_G000367	855	977.528489386069	4341.13084066989	2.15086025125161	0.0104882553532587	Up	0.000174429351173584	NA	NA	NA	NA	gi|723731731|ref|XP_010326644.1|//PREDICTED: uncharacterized protein LOC104649361 [Solanum lycopersicum]
Solyc07g040990.3.1	2716	631.5719392594	1650.04027924266	1.3854822638297	0.00673499398535516	Up	0.000100636907517488	NA	NA	NA	K14497//protein phosphatase 2C [EC:3.1.3.16]	gi|723717013|ref|XP_010324031.1|//PREDICTED: probable protein phosphatase 2C 50 isoform X1 [Solanum lycopersicum];gi|460396347|ref|XP_004243737.1|//PREDICTED: probable protein phosphatase 2C 50 isoform X2 [Solanum lycopersicum]
Solyc09g011480.3.1	2832	471.46648277807	1199.26665896437	1.34692536367785	0.0133349384839923	Up	0.000238831723609901	NA	NA	NA	K10418//dynein light chain LC8-type;K20826	gi|460401771|ref|XP_004246389.1|//PREDICTED: rop guanine nucleotide exchange factor 7-like [Solanum lycopersicum]
Solyc01g108500.3.1	1114	2360.70660902499	5882.01115229655	1.31709076645131	3.16172853975604e-05	Up	2.11757414334415e-07	NA	GO:0003676//nucleic acid binding	NA	K03231//elongation factor 1-alpha	gi|568214389|ref|NP_001275480.1|//DNA binding protein ACBF-like [Solanum tuberosum]
Solyc09g005430.2.1	1836	2.06534348042372	131.063243728076	5.9877376013747	1.45895817952304e-17	Up	2.47029830599905e-20	NA	NA	NA	K11323//histone arginine demethylase JMJD6 [EC:1.14.11.-]	gi|723728772|ref|XP_010326074.1|//PREDICTED: skin secretory protein xP2-like [Solanum lycopersicum]
Solyc09g014500.3.1	740	67.3980448942293	238.298842827809	1.82199329892979	0.00210445281787997	Up	2.39133367573372e-05	NA	NA	NA	K11968//ariadne-1 [EC:2.3.2.27]	gi|460401644|ref|XP_004246327.1|//PREDICTED: protein yippee-like [Solanum lycopersicum]
Solyc03g025930.3.1	1406	79.6659483412293	445.459546619675	2.48325931350794	2.77302056065765e-09	Up	9.39052001577262e-12	NA	NA	NA	K10269//F-box and leucine-rich repeat protein 3;K10268//F-box and leucine-rich repeat protein 2/20	gi|723679568|ref|XP_010317594.1|//PREDICTED: F-box/LRR-repeat protein At3g48880-like isoform X1 [Solanum lycopersicum]
Solyc09g065480.2.1	2917	144.071015117043	338.081630444641	1.23059151344882	0.0327969839786236	Up	0.00077497482554749	NA	GO:0016787//hydrolase activity;GO:0046030//inositol trisphosphate phosphatase activity	GO:0046856//phosphatidylinositol dephosphorylation	K20279//synaptojanin [EC:3.1.3.36]	gi|460403417|ref|XP_004247187.1|//PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2 [Solanum lycopersicum]
Solyc02g092080.2.1	6474	230.228536902608	709.454239564266	1.62364296508391	0.00438217816725846	Up	5.80399110085781e-05	GO:0005840//ribosome	GO:0000166//nucleotide binding;GO:0003735//structural constituent of ribosome	GO:0006412//translation	K02893//large subunit ribosomal protein L23Ae	gi|460372253|ref|XP_004231945.1|//PREDICTED: 60S ribosomal protein L23a-like isoform X1 [Solanum lycopersicum]
Solyc07g062440.1.1	1791	478.430213668127	138.401992262479	-1.78944379065486	0.0164104588168229	Down	0.000310586626965494	NA	NA	NA	NA	gi|723718867|ref|XP_010324394.1|//PREDICTED: uncharacterized protein LOC104648569 [Solanum lycopersicum]
Solyc03g044050.2.1	1829	60.7818943785238	17.174674963088	-1.82335884400317	0.0438968019487812	Down	0.00118425732766212	NA	NA	NA	K07466//replication factor A1	gi|971580444|ref|XP_015159231.1|//PREDICTED: replication protein A 70 kDa DNA-binding subunit D-like [Solanum tuberosum];gi|970022454|ref|XP_015072525.1|//PREDICTED: replication protein A 70 kDa DNA-binding subunit B-like [Solanum pennellii]
Solyc05g009170.2.1	639	24.91445022693	4.8364155529278	-2.36497262543735	0.0461838703776888	Down	0.00129635275997125	NA	NA	NA	K14664//IAA-amino acid hydrolase [EC:3.5.1.-];K10773//endonuclease III [EC:4.2.99.18]	gi|460386460|ref|XP_004238916.1|//PREDICTED: zinc finger protein 6 [Solanum lycopersicum]
Solyc10g024420.2.1	6432	69.0159554353307	406.050939844319	2.55665889290289	5.67322857438404e-08	Up	2.26271674336723e-10	NA	NA	NA	K05665//ATP-binding cassette, subfamily C (CFTR/MRP), member 1	gi|460406162|ref|XP_004248540.1|//PREDICTED: putative ABC transporter C family member 15 isoform X1 [Solanum lycopersicum]
Solyc08g062250.2.1	1188	168.600947939139	4.36368046989389	-5.27192337314613	4.90714765186625e-15	Down	1.03397775710016e-17	NA	NA	NA	K07466//replication factor A1	gi|723726857|ref|XP_010325772.1|//PREDICTED: uncharacterized protein LOC101258482 [Solanum lycopersicum]
Solyc11g071610.2.1	5757	32.1339011100344	217.10768550598	2.75624275538009	0.000239070395141795	Up	1.9430035500857e-06	GO:0005829//cytosol	GO:0016614//oxidoreductase activity, acting on CH-OH group of donors;GO:0009055//electron carrier activity;GO:0051537//2 iron, 2 sulfur cluster binding;GO:0016623//oxidoreductase activity, acting on the aldehyde or oxo group of donors, oxygen as acceptor;GO:0005506//iron ion binding;GO:0046914//transition metal ion binding;GO:0050660//flavin adenine dinucleotide binding;GO:0004854//xanthine dehydrogenase activity;GO:0051536//iron-sulfur cluster binding;GO:0004031//aldehyde oxidase activity;GO:0050662//coenzyme binding	GO:0055114//oxidation-reduction process;GO:0009850//auxin metabolic process;GO:0009115//xanthine catabolic process	K09842//abscisic-aldehyde oxidase [EC:1.2.3.14]	gi|926459517|ref|NP_001234449.2|//aldehyde oxidase [Solanum lycopersicum];gi|723746149|ref|XP_010313468.1|//PREDICTED: abscisic-aldehyde oxidase-like [Solanum lycopersicum]
Solyc03g013620.1.1	483	274.853011365637	1187.98884809209	2.11178910217136	0.0137622170999542	Up	0.000248555676260602	GO:0031224//intrinsic component of membrane;GO:0009534//chloroplast thylakoid	GO:0050136//NADH dehydrogenase (quinone) activity;GO:0048037//cofactor binding	GO:0022904//respiratory electron transport chain;GO:0051234//establishment of localization	K05577//NAD(P)H-quinone oxidoreductase subunit 5 [EC:1.6.5.3]	gi|757813385|gb|AJO25150.1|//NADH-plastoquinone oxidoreductase subunit 5 (chloroplast) [Solanum lycopersicum]
Solyc09g064820.1.1	819	9.79447879744419	111.725896056192	3.51185108207048	1.92000663763368e-08	Up	7.22431665588171e-11	NA	NA	NA	NA	gi|460403334|ref|XP_004247146.1|//PREDICTED: EID1-like F-box protein 3 [Solanum lycopersicum]
Solyc04g011710.1.1	2777	2.02161388786477	73.224252252412	5.17874217032953	1.01429767404872e-11	Up	2.74784334317296e-14	NA	NA	NA	NA	NA
Solyc07g039440.1.1	648	18.289587921559	1.63107500256477	-3.48712754154782	0.000326288405251628	Down	2.76234681046079e-06	NA	NA	NA	K14611//solute carrier family 23 (nucleobase transporter), member 1/2;K13457//disease resistance protein RPM1	gi|302594419|gb|ADL59399.1|//HJTR2GH1 protein [Solanum hjertingii]
BGI_novel_G000290	550	27.348398449077	1.91322813986643	-3.83737552881056	2.68640427926803e-05	Down	1.78911674542063e-07	NA	NA	NA	K07305//peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12];K03136//transcription initiation factor TFIIE subunit alpha;K03549//KUP system potassium uptake protein;K01265//methionyl aminopeptidase [EC:3.4.11.18];K01623//fructose-bisphosphate aldolase, class I [EC:4.1.2.13]	gi|969998394|ref|XP_015072593.1|//PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Solanum pennellii]
Solyc04g008940.3.1	3033	90.5639480802398	720.404597743758	2.99179863073057	2.9061103818659e-06	Up	1.62926758813267e-08	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K03868//RING-box protein 1	gi|985567250|ref|NP_001306602.1|//putative GEM-like protein 8 [Solanum lycopersicum];gi|984880733|ref|NP_001306175.1|//putative GEM-like protein 8 [Solanum lycopersicum];gi|970021679|ref|XP_015072112.1|//PREDICTED: putative GEM-like protein 8 [Solanum pennellii]
Solyc01g095460.3.1	1940	431.533857963813	1127.38222075934	1.3854310587292	0.016525668736419	Up	0.000313388909325928	NA	GO:0003677//DNA binding	GO:0006351//transcription, DNA-templated	K09060//plant G-box-binding factor	gi|460368237|ref|XP_004229974.1|//PREDICTED: transcriptional activator TAF-1 isoform X2 [Solanum lycopersicum]
Solyc03g025400.3.1	1180	87.8101875185318	1.86196556133239	-5.559490032984	2.23055449334933e-14	Down	4.86782408150887e-17	NA	NA	NA	K19329//WW domain-containing oxidoreductase	gi|460377274|ref|XP_004234418.1|//PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like isoform X1 [Solanum lycopersicum]
Solyc10g081810.2.1	1333	52.9554035954591	229.560049222135	2.1160217787057	0.00522993538722051	Up	7.28101777202689e-05	NA	NA	NA	NA	gi|460407926|ref|XP_004249400.1|//PREDICTED: putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0278295 [Solanum lycopersicum]
Solyc08g083140.3.1	1667	1279.5270228883	622.195523959083	-1.04017069525158	0.0191923823885702	Down	0.000383457690797712	NA	NA	NA	K07019//uncharacterized protein	gi|460399861|ref|XP_004245455.1|//PREDICTED: embryogenesis-associated protein EMB8 [Solanum lycopersicum]
Solyc07g008570.3.1	2438	9141.17683251106	2040.95926242552	-2.16313252294455	0.0161654510984605	Down	0.000305341327141031	NA	GO:0046872//metal ion binding;GO:0003993//acid phosphatase activity	GO:0016311//dephosphorylation	K14407//cleavage stimulation factor subunit 2	gi|723712984|ref|XP_010323338.1|//PREDICTED: LOW QUALITY PROTEIN: probable inactive purple acid phosphatase 27 [Solanum lycopersicum];gi|590670162|ref|XP_007037978.1|//Purple acid phosphatase 27 [Theobroma cacao]
Solyc03g116430.2.1	3518	780.804898593195	216.721634109931	-1.84911892726535	8.66924723304672e-06	Down	5.21909755535792e-08	NA	NA	NA	NA	gi|223524316|gb|EEF27435.1|//conserved hypothetical protein [Ricinus communis]
Solyc05g051480.2.1	444	27.5918588591914	4.25276200965264	-2.69777062694511	0.0101138875955148	Down	0.000166300518464837	NA	NA	NA	NA	gi|565401467|ref|XP_006366220.1|//PREDICTED: uncharacterized protein LOC102592896 [Solanum tuberosum]
Solyc10g054900.2.1	777	6.46455344337454	138.851188235152	4.42484499762398	2.83038226182268e-11	Up	8.20030229748829e-14	NA	NA	NA	NA	gi|460406453|ref|XP_004248679.1|//PREDICTED: proline-rich protein 4-like [Solanum lycopersicum]
Solyc09g011060.2.1	2757	13.8056380221291	133.274710087208	3.27107357563026	2.2004940306679e-05	Up	1.44894628952433e-07	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|914726381|gb|AKV93711.1|//clade IV lectin receptor kinase [Solanum lycopersicum];gi|723727349|ref|XP_010325846.1|//PREDICTED: L-type lectin-domain containing receptor kinase IV.1 isoform X2 [Solanum lycopersicum]
Solyc04g078110.1.1	2301	169.314461852351	55.8559751578949	-1.59992167960666	0.00162731308904055	Down	1.77820203475855e-05	NA	GO:0004175//endopeptidase activity;GO:0005515//protein binding	GO:0044092//negative regulation of molecular function;GO:0019538//protein metabolic process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13199//plasminogen activator inhibitor 1 RNA-binding protein;K12663//Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase [EC:5.3.3.-];K01183//chitinase [EC:3.2.1.14];K00121//S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]	gi|350537151|ref|NP_001234282.1|//SBT1 protein precursor [Solanum lycopersicum]
Solyc07g052770.2.1	2899	91.4149749484847	23.1531254462769	-1.98122356024232	0.0431737663473365	Down	0.00114850633282789	NA	NA	NA	K03283//heat shock 70kDa protein 1/8;K19613//leucine-rich repeat protein SHOC2	gi|970068067|ref|XP_015061155.1|//PREDICTED: TMV resistance protein N-like [Solanum pennellii]
Solyc01g067440.3.1	381	37.2318731379173	158.166749087788	2.08683623311007	0.037506895864246	Up	0.000938483867619505	NA	GO:0015036//disulfide oxidoreductase activity	GO:0019725//cellular homeostasis	K03676//glutaredoxin 3	gi|460366689|ref|XP_004229212.1|//PREDICTED: monothiol glutaredoxin-S10 [Solanum lycopersicum]
Solyc01g087240.3.1	1655	793.752101239423	1714.77203254604	1.1112563814789	0.0447687453635823	Up	0.00122294123241753	NA	NA	NA	K08064//nuclear transcription factor Y, alpha	gi|970004423|ref|XP_015063007.1|//PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X1 [Solanum pennellii]
Solyc05g009370.3.1	1227	9715.27816141321	4055.72537263897	-1.26029533697381	0.016897958434992	Down	0.000326171226141057	GO:0030529//intracellular ribonucleoprotein complex	GO:0005198//structural molecule activity	GO:0010467//gene expression	K02876//large subunit ribosomal protein L15	gi|460386490|ref|XP_004238931.1|//PREDICTED: 50S ribosomal protein L15, chloroplastic [Solanum lycopersicum]
BGI_novel_G000159	1990	1.87938172100054	16.5927885713384	3.14222633764021	0.00268641955992071	Up	3.2372844608184e-05	NA	NA	NA	K10875//DNA repair and recombination protein RAD54 and RAD54-like protein [EC:3.6.4.-]	gi|970045817|ref|XP_015084392.1|//PREDICTED: SNF2 domain-containing protein CLASSY 3-like [Solanum pennellii]
Solyc08g016170.3.1	1881	2855.68356769883	1263.56521736737	-1.17633599707683	0.0431789989340371	Down	0.00115676890698854	NA	NA	NA	K09458//3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]	gi|460398498|ref|XP_004244796.1|//PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase I, chloroplastic [Solanum lycopersicum]
Solyc10g008040.3.1	2490	11.6417718685421	47.8146837805479	2.03814308260192	0.00405152472991519	Up	5.30507809764265e-05	NA	NA	NA	K20254//perilipin-4;K01835//phosphoglucomutase [EC:5.4.2.2]	gi|460406041|ref|XP_004248482.1|//PREDICTED: seed biotin-containing protein SBP65-like isoform X1 [Solanum lycopersicum]
Solyc05g010320.3.1	1077	2294.74811181854	769.387926042417	-1.57655270686787	0.000350350223074639	Down	3.00560073977566e-06	NA	GO:0016872//intramolecular lyase activity	GO:0009699//phenylpropanoid biosynthetic process;GO:0006575//cellular modified amino acid metabolic process	K01859//chalcone isomerase [EC:5.5.1.6]	gi|565363784|ref|XP_006348611.1|//PREDICTED: chalcone--flavonone isomerase B-like [Solanum tuberosum];gi|460386617|ref|XP_004238994.1|//PREDICTED: chalcone--flavonone isomerase [Solanum lycopersicum]
Solyc07g052070.2.1	1890	1152.48540373655	51.5060797779599	-4.48386193068891	2.83038226182268e-11	Down	8.1414286767983e-14	NA	GO:0005506//iron ion binding;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K07428//cytochrome P450, family 4, subfamily X [EC:1.14.14.1]	gi|460396572|ref|XP_004243845.1|//PREDICTED: cytochrome P450 CYP72A219-like [Solanum lycopersicum]
Solyc10g052470.1.1	708	516.511057389713	50.8984872970752	-3.34310454925823	4.75134748645218e-08	Down	1.84139967304276e-10	GO:0043231//intracellular membrane-bounded organelle;GO:0005634//nucleus	GO:0003677//DNA binding;GO:0003676//nucleic acid binding	NA	NA	gi|350540018|ref|NP_001233849.1|//SANT/MYB domain protein [Solanum lycopersicum]
Solyc10g050970.1.1	672	127.004654412081	23.6085004425297	-2.42750305630567	0.0323573019150559	Down	0.000756062929948817	NA	NA	NA	K09286//EREBP-like factor	gi|460406569|ref|XP_004248735.1|//PREDICTED: ethylene-responsive transcription factor ERF109-like [Solanum lycopersicum]
Solyc12g011030.2.1	1586	92.158975043742	18.8851044263758	-2.28687591050326	8.50402410195698e-05	Down	6.07955969210907e-07	GO:0030312//external encapsulating structure;GO:0005576//extracellular region	GO:0016758//transferase activity, transferring hexosyl groups;GO:0016798//hydrolase activity, acting on glycosyl bonds	GO:0044042//glucan metabolic process	K08235//xyloglucan:xyloglucosyl transferase [EC:2.4.1.207]	gi|849602898|ref|NP_001296988.1|//brassinosteroid-regulated protein BRU1-like precursor [Solanum lycopersicum]
Solyc11g071530.1.1	618	1.72698153367628	24.7227530294203	3.83951484351865	2.22582488053715e-05	Up	1.47400074867193e-07	NA	NA	NA	K02935//large subunit ribosomal protein L7/L12	gi|460411617|ref|XP_004251203.1|//PREDICTED: 54S ribosomal protein L12, mitochondrial-like [Solanum lycopersicum]
Solyc02g077770.3.1	518	154.129496926195	549.228339120402	1.83326307995585	0.0196723618894526	Up	0.000394527933441632	GO:0016021//integral component of membrane	NA	NA	K01183//chitinase [EC:3.2.1.14]	gi|590624256|ref|XP_007025554.1|//Uncharacterized protein TCM_029816 [Theobroma cacao];gi|970011328|ref|XP_015066573.1|//PREDICTED: MACPF domain-containing protein NSL1 [Solanum pennellii]
Solyc01g007960.3.1	2394	23.199633455994	2.83455435353162	-3.03290817288862	0.00505394498581466	Down	6.97534269325525e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460366034|ref|XP_004228898.1|//PREDICTED: cysteine-rich receptor-like protein kinase 2 isoform X1 [Solanum lycopersicum]
Solyc08g075160.3.1	2256	1777.54274724726	816.598039963677	-1.12218624506549	0.00547520236862187	Down	7.66367641617691e-05	NA	GO:0019238//cyclohydrolase activity;GO:0016742//hydroxymethyl-, formyl- and related transferase activity	GO:0009168//purine ribonucleoside monophosphate biosynthetic process	K00602//phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]	gi|350535392|ref|NP_001234704.1|//putative inosine monophosphate cyclohydrolase [Solanum lycopersicum]
BGI_novel_G000028	1360	2.81751571837249	179.671750994594	5.99479612887118	2.07190480479243e-21	Up	2.72854980500941e-24	NA	NA	NA	NA	NA
Solyc07g052720.3.1	1349	8.37505040098401	240.371353433564	4.84302328841314	3.55158531188442e-14	Up	8.01802756944221e-17	NA	NA	NA	K09260//MADS-box transcription enhancer factor 2A;K04454//MADS-box transcription enhancer factor 2C	gi|723715621|ref|XP_010323800.1|//PREDICTED: MADS-box transcription factor 50-like isoform X1 [Solanum lycopersicum]
Solyc09g092270.3.1	1660	2036.15947990656	6188.20241242382	1.60366982394694	0.0011157699186308	Up	1.15451980142029e-05	NA	NA	NA	K13065//shikimate O-hydroxycinnamoyltransferase [EC:2.3.1.133]	gi|460404820|ref|XP_004247878.1|//PREDICTED: protein ECERIFERUM 26-like [Solanum lycopersicum]
Solyc10g081240.2.1	1650	5363.78407698769	1610.31603013465	-1.73590731161999	0.0015194586103868	Down	1.6351174420387e-05	GO:0044429//mitochondrial part	GO:0030554//adenyl nucleotide binding;GO:0042802//identical protein binding;GO:0003824//catalytic activity	GO:0044267//cellular protein metabolic process	K03687//molecular chaperone GrpE	gi|460407825|ref|XP_004249350.1|//PREDICTED: grpE protein homolog, mitochondrial [Solanum lycopersicum]
Solyc02g069060.3.1	2056	716.082369079965	232.585407231587	-1.62236496373678	0.0044970449408275	Down	6.04073087209021e-05	NA	NA	NA	K12236//transcriptional repressor NF-X1	gi|723676287|ref|XP_010317009.1|//PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like isoform X1 [Solanum lycopersicum];gi|723676281|ref|XP_010317007.1|//PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like isoform X1 [Solanum lycopersicum];gi|723676290|ref|XP_010317010.1|//PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like isoform X2 [Solanum lycopersicum]
Solyc06g060610.2.1	1781	1046.63358953489	359.172017721978	-1.54300960264593	0.0297839220091111	Down	0.00068024384466006	NA	NA	NA	K00485//dimethylaniline monooxygenase (N-oxide forming) [EC:1.14.13.8]	gi|460392812|ref|XP_004242007.1|//PREDICTED: flavin-containing monooxygenase FMO GS-OX-like 4 [Solanum lycopersicum]
BGI_novel_G000233	1949	2.6025023740281	511.262047946354	7.61801964593109	2.0470508224839e-33	Up	1.23237435224978e-36	NA	NA	NA	NA	gi|970056132|ref|XP_015089713.1|//PREDICTED: uncharacterized protein LOC107032636 [Solanum pennellii]
Solyc06g062600.3.1	1809	188.190130798373	486.775881044935	1.37106671542054	0.0287886585390947	Up	0.000646982366761418	NA	NA	NA	K15403//fatty acid omega-hydroxy dehydrogenase [EC:1.1.-.-]	gi|460392531|ref|XP_004241869.1|//PREDICTED: protein HOTHEAD [Solanum lycopersicum];gi|697139294|ref|XP_009623734.1|//PREDICTED: protein HOTHEAD-like [Nicotiana tomentosiformis]
Solyc02g081920.3.1	3415	2269.64206438712	926.415380855239	-1.29273368309455	0.0238532878380487	Down	0.000510686713317896	GO:0009508//plastid chromosome;GO:0000427//plastid-encoded plastid RNA polymerase complex;GO:0009534//chloroplast thylakoid	GO:0016279//protein-lysine N-methyltransferase activity	GO:0018026//peptidyl-lysine monomethylation;GO:0042793//transcription from plastid promoter;GO:0009658//chloroplast organization;GO:0010027//thylakoid membrane organization	K00592//[ribulose-bisphosphate carboxylase]-lysine N-methyltransferase [EC:2.1.1.127];K19199//histone-lysine N-methyltransferase SETD3 [EC:2.1.1.43]	gi|460373641|ref|XP_004232623.1|//PREDICTED: uncharacterized protein LOC101252349 isoform X2 [Solanum lycopersicum];gi|565395071|ref|XP_006363171.1|//PREDICTED: protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X2 [Solanum tuberosum]
Solyc02g089770.3.1	1582	203.353913195022	18.3683720831942	-3.46869707642083	1.12894985262017e-05	Down	6.92398788339871e-08	NA	NA	NA	K09753//cinnamoyl-CoA reductase [EC:1.2.1.44]	gi|460372564|ref|XP_004232099.1|//PREDICTED: dihydroflavonol-4-reductase-like isoform X2 [Solanum lycopersicum]
Solyc02g083835.1.1	552	504.804961672819	2738.36657103348	2.43951759008557	6.99832811197841e-07	Up	3.4231954492877e-09	NA	GO:0005515//protein binding	NA	K03686//molecular chaperone DnaJ	gi|460373370|ref|XP_004232493.1|//PREDICTED: chaperone protein dnaJ 11, chloroplastic [Solanum lycopersicum]
Solyc09g011910.3.1	2216	37.9667125759785	151.383971489206	1.99540547025722	4.26669698223967e-06	Up	2.44022252812744e-08	NA	NA	NA	K01592//tyrosine decarboxylase [EC:4.1.1.25]	gi|460401706|ref|XP_004246358.1|//PREDICTED: uncharacterized protein LOC101258777 [Solanum lycopersicum]
Solyc06g036130.3.1	2031	2194.14494834033	704.921302593947	-1.63812472622221	8.66924723304672e-06	Down	5.19759462535557e-08	GO:0044464//cell part	GO:0015291//secondary active transmembrane transporter activity	GO:0015893//drug transport	K03327//multidrug resistance protein, MATE family	gi|460390191|ref|XP_004240722.1|//PREDICTED: protein TRANSPARENT TESTA 12 isoform X1 [Solanum lycopersicum];gi|970031924|ref|XP_015077259.1|//PREDICTED: protein DETOXIFICATION 35-like [Solanum pennellii]
Solyc05g012100.3.1	3315	2061.1675898407	795.610677549637	-1.37332726938751	0.0109656815082457	Down	0.000184432390193995	NA	NA	NA	K13941//2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase / dihydropteroate synthase [EC:2.7.6.3 2.5.1.15];K00847//fructokinase [EC:2.7.1.4]	gi|565363906|ref|XP_006348670.1|//PREDICTED: fructokinase-like 2, chloroplastic [Solanum tuberosum];gi|460386702|ref|XP_004239035.1|//PREDICTED: fructokinase-like 2, chloroplastic [Solanum lycopersicum]
Solyc04g063320.1.1	1566	71.3321115863425	12.8087497513485	-2.4774220185191	0.00214996598807394	Down	2.46904919335969e-05	NA	NA	NA	K00166//2-oxoisovalerate dehydrogenase E1 component alpha subunit [EC:1.2.4.4]	gi|723693453|ref|XP_010320010.1|//PREDICTED: 2-oxoisovalerate dehydrogenase subunit alpha 1, mitochondrial isoform X2 [Solanum lycopersicum]
Solyc06g083650.3.1	1403	340.28278883391	114.816851971522	-1.56739977736105	0.0298684732629967	Down	0.000683298782552658	NA	GO:0016787//hydrolase activity	GO:0044238//primary metabolic process	K21026;K01188//beta-glucosidase [EC:3.2.1.21];K00679//phospholipid:diacylglycerol acyltransferase [EC:2.3.1.158];K10960//geranylgeranyl reductase [EC:1.3.1.83]	gi|460393568|ref|XP_004242381.1|//PREDICTED: GDSL esterase/lipase At5g33370-like [Solanum lycopersicum]
Solyc10g082030.2.1	1206	40071.8889605793	18692.0158712749	-1.10016835169895	0.00610509376303514	Down	8.70613890277427e-05	NA	GO:0016209//antioxidant activity;GO:0016705//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen;GO:0004601//peroxidase activity;GO:0051920//peroxiredoxin activity	GO:0019725//cellular homeostasis;GO:0098869//cellular oxidant detoxification;GO:0055114//oxidation-reduction process	K03386//peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15]	gi|460407951|ref|XP_004249412.1|//PREDICTED: 2-Cys peroxiredoxin BAS1, chloroplastic [Solanum lycopersicum]
Solyc06g060260.3.1	1900	2696.92234777405	935.196186080292	-1.52797303140063	5.99477088488273e-05	Down	4.15034745388277e-07	GO:0009536//plastid	GO:0004601//peroxidase activity;GO:0005506//iron ion binding	GO:0008152//metabolic process;GO:0006950//response to stress	K00434//L-ascorbate peroxidase [EC:1.11.1.11]	gi|807201017|ref|NP_001293099.1|//stromal ascorbate peroxidase 7 [Solanum lycopersicum]
Solyc02g084167.1.1	5763	33.3094115223773	139.931422551488	2.0707181946083	0.00252809714264865	Up	3.01541481062431e-05	NA	NA	NA	K08739//DNA mismatch repair protein MLH3	gi|723672638|ref|XP_010316420.1|//PREDICTED: uncharacterized protein LOC104645760 [Solanum lycopersicum];gi|971539165|ref|XP_015160674.1|//PREDICTED: DNA mismatch repair protein MLH3 isoform X9 [Solanum tuberosum]
Solyc03g121080.3.1	3633	292.090285300456	1744.8452759009	2.57861283002633	0.000297654565351072	Up	2.48633455649388e-06	NA	NA	NA	NA	gi|723685101|ref|XP_004235638.2|//PREDICTED: uncharacterized protein LOC101253763 [Solanum lycopersicum]
Solyc08g016670.3.1	1285	1006.14855967349	481.238437950618	-1.06401955284187	0.0461838703776888	Down	0.0012877905637689	NA	NA	NA	K04507//calcyclin binding protein	gi|460398521|ref|XP_004244806.1|//PREDICTED: calcyclin-binding protein-like [Solanum lycopersicum]
Solyc06g083050.3.1	1776	37.0146559552291	7.8347845595929	-2.24013110982956	0.0167289803541106	Down	0.000319775193321773	NA	NA	NA	K16296//serine carboxypeptidase-like clade I [EC:3.4.16.-]	gi|460393680|ref|XP_004242437.1|//PREDICTED: serine carboxypeptidase-like 20 [Solanum lycopersicum]
Solyc10g085555.1.1	1861	3051.37905893338	1451.40975278826	-1.07200654107468	0.0461838703776888	Down	0.00128480648203884	GO:0016020//membrane;GO:0043234//protein complex;GO:0005576//extracellular region;GO:0000015//phosphopyruvate hydratase complex;GO:0009536//plastid;GO:0031967//organelle envelope	GO:0000287//magnesium ion binding;GO:0016836//hydro-lyase activity;GO:0004634//phosphopyruvate hydratase activity;GO:0046914//transition metal ion binding;GO:0003676//nucleic acid binding	GO:0006007//glucose catabolic process;GO:0009314//response to radiation;GO:0006970//response to osmotic stress;GO:0009725//response to hormone;GO:0006096//glycolytic process;GO:0010038//response to metal ion	K01689//enolase [EC:4.2.1.11]	gi|460408278|ref|XP_004249573.1|//PREDICTED: enolase-like [Solanum lycopersicum]
Solyc02g081910.2.1	4519	1132.05960390809	389.836542479169	-1.53800868197362	0.00427464042651347	Down	5.62939439846376e-05	NA	NA	NA	K03168//DNA topoisomerase I [EC:5.99.1.2]	gi|723673486|ref|XP_010316521.1|//PREDICTED: uncharacterized protein LOC101248941 isoform X1 [Solanum lycopersicum];gi|460375950|ref|XP_004233765.1|//PREDICTED: uncharacterized protein LOC101248941 isoform X2 [Solanum lycopersicum]
Solyc10g078580.1.1	183	1399.95024159359	407.05495249174	-1.78208007355573	0.000729860770201225	Down	7.03030278705323e-06	NA	NA	NA	NA	gi|970056954|ref|XP_015055121.1|//PREDICTED: arabinogalactan peptide 14-like [Solanum pennellii]
Solyc10g079150.2.1	4143	19.2152125970735	68.6235093186535	1.8364539669005	0.00245596801599859	Up	2.92014107331736e-05	NA	NA	NA	K08064//nuclear transcription factor Y, alpha;K00942//guanylate kinase [EC:2.7.4.8]	gi|723738178|ref|XP_010312081.1|//PREDICTED: nuclear transcription factor Y subunit A-7-like isoform X2 [Solanum lycopersicum]
Solyc05g051500.3.1	1695	229.617946698608	669.820277603628	1.54453864574589	0.0375631920034782	Up	0.000942719233409337	NA	NA	NA	NA	gi|723702299|ref|XP_004240249.2|//PREDICTED: WEB family protein At5g16730, chloroplastic-like [Solanum lycopersicum]
Solyc01g103540.3.1	2802	12364.0569542498	25858.1233772412	1.06446537205096	0.0394199222530642	Up	0.00100174314386874	NA	NA	NA	K20102//YTH domain-containing family protein	gi|723663823|ref|XP_010314509.1|//PREDICTED: YTH domain-containing family protein 1 isoform X3 [Solanum lycopersicum];gi|723663818|ref|XP_010314501.1|//PREDICTED: YTH domain-containing family protein 1 isoform X1 [Solanum lycopersicum];gi|460369202|ref|XP_004230452.1|//PREDICTED: YTH domain-containing family protein 1 isoform X2 [Solanum lycopersicum]
Solyc11g021060.2.1	849	12958.4917584776	5046.11020892267	-1.36065419165405	0.0135967447042918	Down	0.000244543927781596	NA	GO:0004866//endopeptidase inhibitor activity	GO:0051346//negative regulation of hydrolase activity	NA	gi|350534604|ref|NP_001234661.1|//proteinase inhibitor type-2 TR8 precursor [Solanum lycopersicum]
Solyc06g084760.2.1	1719	196.69889183313	745.499582242186	1.92221871431175	0.017055418415661	Up	0.000331777526466372	NA	GO:0005506//iron ion binding;GO:0016491//oxidoreductase activity	NA	K07428//cytochrome P450, family 4, subfamily X [EC:1.14.14.1];K07426//cytochrome P450, family 4, subfamily B, polypeptide 1 [EC:1.14.14.1]	gi|565388845|ref|XP_006360179.1|//PREDICTED: cytochrome P450 CYP72A219-like [Solanum tuberosum]
Solyc03g119930.1.1	1377	831.24109891038	2434.37205404406	1.55021078525714	0.0225533330323163	Up	0.000477763724167291	NA	NA	GO:0006810//transport	NA	gi|460379959|ref|XP_004235726.1|//PREDICTED: molybdate transporter 2 [Solanum lycopersicum]
Solyc03g013440.3.1	2167	200.002280240928	724.56462543065	1.85709792413409	0.000532004996093556	Up	4.92430406136941e-06	GO:0016020//membrane	NA	NA	K15015//solute carrier family 32 (vesicular inhibitory amino acid transporter)	gi|723681955|ref|XP_010317523.1|//PREDICTED: vacuolar amino acid transporter 1-like isoform X3 [Solanum lycopersicum];gi|723681958|ref|XP_010317524.1|//PREDICTED: vacuolar amino acid transporter 1-like isoform X4 [Solanum lycopersicum]
Solyc09g010650.1.1	453	18.6903304480807	94.8652637737933	2.34358784483712	0.000336929543520732	Up	2.87778930576085e-06	NA	NA	NA	K19041//E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27]	gi|723727502|ref|XP_004246875.2|//PREDICTED: RING-H2 finger protein ATL33 [Solanum lycopersicum]
Solyc12g005450.1.1	1032	69.3441284580662	19.5700129995082	-1.82512901681449	0.0367542436766891	Down	0.000915502476350536	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460412210|ref|XP_004251495.1|//PREDICTED: probable receptor-like protein kinase At4g10390 [Solanum lycopersicum]
Solyc04g076260.2.1	697	219.780687969772	59.8628529536958	-1.87633168110711	0.0431789989340371	Down	0.00115124923447788	NA	NA	NA	K02183//calmodulin	gi|460384584|ref|XP_004237990.1|//PREDICTED: uncharacterized protein At5g64816-like [Solanum lycopersicum]
Solyc01g066010.1.1	1167	6.57399786934073	39.5250171036941	2.58792319293478	0.00131153151287992	Up	1.38830242830302e-05	NA	NA	NA	NA	gi|723660099|ref|XP_010324874.1|//PREDICTED: zinc finger CCCH domain-containing protein 46 isoform X5 [Solanum lycopersicum];gi|970056579|ref|XP_015054900.1|//PREDICTED: zinc finger CCCH domain-containing protein 53-like [Solanum pennellii]
Solyc05g050590.3.1	2222	295.892502386101	2.22175427476334	-7.05723006636135	1.81833175658864e-27	Down	1.7104373674499e-30	NA	GO:0016301//kinase activity;GO:0016772//transferase activity, transferring phosphorus-containing groups	GO:0016310//phosphorylation	K08770//ubiquitin C;K14544//U3 small nucleolar RNA-associated protein 22	gi|460388834|ref|XP_004240069.1|//PREDICTED: phosphatidylinositol 4-kinase gamma 4-like [Solanum lycopersicum]
Solyc02g068040.3.1	3469	263.453078052524	2137.3826140328	3.0202272481039	8.21857623071671e-14	Up	1.9172657798263e-16	NA	NA	NA	NA	gi|723676655|ref|XP_010317064.1|//PREDICTED: uncharacterized protein LOC101250767 [Solanum lycopersicum]
Solyc04g007010.3.1	683	9.0021955921245	40.2415676819683	2.16033769315451	0.0310525329775333	Up	0.000717396818610282	NA	NA	GO:0006950//response to stress	NA	gi|460382591|ref|XP_004237022.1|//PREDICTED: kirola-like [Solanum lycopersicum]
Solyc10g079640.2.1	1846	2425.95749317806	695.082480252244	-1.80329818529229	0.035874570842553	Down	0.000885936606886805	NA	GO:0016811//hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	NA	K14664//IAA-amino acid hydrolase [EC:3.5.1.-]	gi|460407558|ref|XP_004249219.1|//PREDICTED: IAA-amino acid hydrolase ILR1-like 6 [Solanum lycopersicum]
Solyc01g096320.3.1	1157	172.151464825872	1150.9912981374	2.74112656440202	1.06470039070683e-07	Up	4.52688957180539e-10	NA	NA	NA	K09338//homeobox-leucine zipper protein	gi|460368324|ref|XP_004230017.1|//PREDICTED: homeobox-leucine zipper protein ATHB-12 [Solanum lycopersicum]
Solyc06g060570.3.1	1055	305.62039731828	46.3240934347822	-2.72190618504413	7.94426017158333e-08	Down	3.34682799886724e-10	NA	NA	NA	K02183//calmodulin	gi|460392818|ref|XP_004242010.1|//PREDICTED: dihydrofolate reductase-like [Solanum lycopersicum]
Solyc02g084265.1.1	2200	9.64772479267267	173.905453485784	4.17197061042016	2.14827168044346e-11	Up	6.06239891760769e-14	NA	NA	NA	K08739//DNA mismatch repair protein MLH3	gi|971539159|ref|XP_015160667.1|//PREDICTED: DNA mismatch repair protein MLH3 isoform X7 [Solanum tuberosum];gi|697105041|ref|XP_009606330.1|//PREDICTED: DNA mismatch repair protein MLH3 [Nicotiana tomentosiformis]
Solyc06g075170.1.1	492	125.683880570072	546.060076226278	2.11926005117883	0.00115107394374351	Up	1.20092983921151e-05	NA	NA	NA	NA	gi|460391328|ref|XP_004241275.1|//PREDICTED: uncharacterized protein LOC101262623 [Solanum lycopersicum]
Solyc08g075750.3.1	1486	5493.43623398659	2486.16822165561	-1.14378494407548	0.0259847042429877	Down	0.000565118676014858	NA	GO:0004175//endopeptidase activity;GO:0004252//serine-type endopeptidase activity	GO:0006508//proteolysis;GO:0019538//protein metabolic process	K01358//ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	gi|460400918|ref|XP_004245978.1|//PREDICTED: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Solanum lycopersicum]
Solyc01g010050.3.1	1875	1761.04481325915	3924.98152623922	1.15625424181159	0.0312321964566499	Up	0.000722722685812532	NA	GO:0016831//carboxy-lyase activity	GO:0006596//polyamine biosynthetic process	K01611//S-adenosylmethionine decarboxylase [EC:4.1.1.50]	gi|998614004|ref|NP_001307257.1|//S-adenosylmethionine decarboxylase proenzyme-like [Solanum lycopersicum]
Solyc08g076790.3.1	1409	171.509143882111	41.4818564282445	-2.04773312934172	0.0087765887159976	Down	0.000138367410618316	NA	NA	NA	K09753//cinnamoyl-CoA reductase [EC:1.2.1.44]	gi|460400772|ref|XP_004245906.1|//PREDICTED: cinnamoyl-CoA reductase 2-like isoform X2 [Solanum lycopersicum]
Solyc11g017470.2.1	1385	1309.94246373575	3091.18789536731	1.23865790388494	0.0415915546729766	Up	0.0010876370733235	NA	GO:0003676//nucleic acid binding	NA	K12581//CCR4-NOT transcription complex subunit 7/8;K03094//S-phase kinase-associated protein 1;K13126//polyadenylate-binding protein;K01054//acylglycerol lipase [EC:3.1.1.23]	gi|525313915|ref|NP_001265908.1|//NAC domain-containing protein 2-like [Solanum lycopersicum]
Solyc03g116280.3.1	974	125.695512892197	30.8183319313478	-2.02807246704096	0.000769278133643712	Down	7.46787667833381e-06	NA	GO:0016706//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	GO:0051553//flavone biosynthetic process	K04124//gibberellin 3-beta-dioxygenase [EC:1.14.11.15];K04125//gibberellin 2-oxidase [EC:1.14.11.13]	gi|565397290|ref|XP_006364232.1|//PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase 5-like isoform X1 [Solanum tuberosum]
Solyc09g011570.3.1	1129	727.175774804661	35.6474239810195	-4.35043440737202	1.01840847566822e-06	Down	5.13476824846828e-09	NA	GO:0003824//catalytic activity	NA	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|723727214|ref|XP_010325821.1|//PREDICTED: probable glutathione S-transferase [Solanum lycopersicum];gi|460401754|ref|XP_004246382.1|//PREDICTED: probable glutathione S-transferase [Solanum lycopersicum]
Solyc01g109140.3.1	1531	3.05048278823576	18.1020920488842	2.56904694274012	0.014512340476583	Up	0.000265379744576865	NA	GO:0005506//iron ion binding;GO:0016491//oxidoreductase activity	NA	K01723//hydroperoxide dehydratase [EC:4.2.1.92];K17874//9-divinyl ether synthase [EC:4.2.1.121]	gi|350536919|ref|NP_001234527.1|//9-divinyl ether synthase [Solanum lycopersicum]
Solyc09g011170.3.1	7434	495.782090591498	1744.9124939237	1.81537662594143	0.000104893841033832	Up	7.65677283386515e-07	NA	NA	NA	K08867//WNK lysine deficient protein kinase [EC:2.7.11.1]	gi|930425288|ref|NP_001234845.2|//Prf interactor 30137 [Solanum lycopersicum]
Solyc09g090430.3.1	854	835.058710113541	1826.5539656039	1.1291748416027	0.0287886585390947	Up	0.000647763773427349	NA	GO:0003677//DNA binding;GO:0016840//carbon-nitrogen lyase activity;GO:0016835//carbon-oxygen lyase activity	GO:0006082//organic acid metabolic process	K01725//cyanate lyase [EC:4.2.1.104]	gi|460404570|ref|XP_004247754.1|//PREDICTED: cyanate hydratase [Solanum lycopersicum]
Solyc09g011760.3.1	2111	820.750557813209	1722.86029515671	1.06978998933279	0.00974482301968967	Up	0.000156932093630853	GO:0005758//mitochondrial intermembrane space;GO:0019866//organelle inner membrane	GO:0043169//cation binding	GO:0006612//protein targeting to membrane	K14500//BR-signaling kinase [EC:2.7.11.1];K17778//mitochondrial import inner membrane translocase subunit TIM10	gi|350537255|ref|NP_001234286.1|//small zinc finger-like protein [Solanum lycopersicum]
Solyc11g005700.1.1	1263	211.005879693215	76.3924525660105	-1.46578118549384	0.0390472366549826	Down	0.000984646958994624	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K08332//vacuolar protein 8	gi|460408921|ref|XP_004249889.1|//PREDICTED: U-box domain-containing protein 27-like [Solanum lycopersicum]
Solyc09g010220.3.1	1542	219.230775109615	623.305041720729	1.50748804759707	0.0113847729109208	Up	0.000194479696788879	NA	GO:0008238//exopeptidase activity	GO:0019538//protein metabolic process	K01285//lysosomal Pro-X carboxypeptidase [EC:3.4.16.2]	gi|460401954|ref|XP_004246480.1|//PREDICTED: lysosomal Pro-X carboxypeptidase-like [Solanum lycopersicum]
Solyc10g087013.1.1	2226	200.674261558593	69.6793955957126	-1.52605157372424	0.016912630485686	Down	0.000327090795411168	NA	GO:0005506//iron ion binding;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30];K15472//premnaspirodiene oxygenase [EC:1.14.13.121]	gi|723739404|ref|XP_004249520.2|//PREDICTED: premnaspirodiene oxygenase-like [Solanum lycopersicum]
Solyc01g108087.1.1	1510	232.867011173295	676.413919275063	1.53840007153879	0.00372478398720081	Up	4.73057811147129e-05	NA	NA	NA	K14432//ABA responsive element binding factor	gi|460369867|ref|XP_004230778.1|//PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 7 [Solanum lycopersicum]
Solyc04g074030.3.1	3080	1380.13529272094	197.62873967933	-2.80394503158792	0.00479242839814778	Down	6.58176756339669e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K00924;K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1];K17422//large subunit ribosomal protein L41;K08286//protein-serine/threonine kinase [EC:2.7.11.-]	gi|971561990|ref|XP_015167090.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Solanum tuberosum];gi|723694299|ref|XP_010320169.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 isoform X2 [Solanum lycopersicum];gi|723696560|ref|XP_010320513.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Solanum lycopersicum]
Solyc12g098490.2.1	1803	592.452915010534	273.83952907871	-1.11336978441725	0.0272904929336847	Down	0.000605839290772999	NA	GO:0016742//hydroxymethyl-, formyl- and related transferase activity;GO:0048037//cofactor binding	GO:0009069//serine family amino acid metabolic process;GO:0006730//one-carbon metabolic process	K00600//glycine hydroxymethyltransferase [EC:2.1.2.1]	gi|460415278|ref|XP_004252986.1|//PREDICTED: serine hydroxymethyltransferase 4 [Solanum lycopersicum]
Solyc02g084740.3.1	2018	245.196588369903	568.176073370005	1.21239917333393	0.018359492359321	Up	0.000364053597974271	GO:0016021//integral component of membrane	GO:0008395//steroid hydroxylase activity;GO:0016709//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen;GO:0020037//heme binding;GO:0005506//iron ion binding	GO:0010268//brassinosteroid homeostasis;GO:0016132//brassinosteroid biosynthetic process;GO:0048443//stamen development;GO:0016125//sterol metabolic process;GO:0009965//leaf morphogenesis;GO:0055114//oxidation-reduction process;GO:0048441//petal development;GO:0042814//monopolar cell growth	K12637//3-epi-6-deoxocathasterone 23-monooxygenase [EC:1.14.13.112]	gi|460373274|ref|XP_004232446.1|//PREDICTED: 3-epi-6-deoxocathasterone 23-monooxygenase [Solanum lycopersicum]
Solyc08g081170.3.1	3119	1643.79229996693	669.231947881126	-1.29644979628705	6.23444361076421e-05	Down	4.35151483546856e-07	NA	NA	NA	NA	gi|723723640|ref|XP_010325293.1|//PREDICTED: hop-interacting protein THI138 isoform X1 [Solanum lycopersicum]
Solyc07g064860.2.1	1196	1.64321399479571	10.9154489889502	2.7317791954595	0.0176837378338221	Up	0.000346661677819968	NA	NA	NA	NA	gi|460397580|ref|XP_004244345.1|//PREDICTED: uncharacterized protein LOC101264953 [Solanum lycopersicum]
Solyc04g008140.2.1	3088	6.0665266105743	30.7063360365735	2.33959373327552	0.0263160313001665	Up	0.000578265503228251	NA	GO:0043531//ADP binding;GO:0005524//ATP binding;GO:0000166//nucleotide binding	GO:0006952//defense response	K13453;K13457//disease resistance protein RPM1	gi|723691071|ref|XP_010319557.1|//PREDICTED: putative late blight resistance protein homolog R1B-17 [Solanum lycopersicum];gi|460382388|ref|XP_004236921.1|//PREDICTED: putative late blight resistance protein homolog R1A-3 [Solanum lycopersicum]
Solyc01g095740.3.1	9937	2975.30907025328	1290.4165374794	-1.2052027082662	0.0129279850260184	Down	0.000230083791146732	NA	NA	NA	K01897//long-chain acyl-CoA synthetase [EC:6.2.1.3]	gi|723661531|ref|XP_010326994.1|//PREDICTED: long chain acyl-CoA synthetase 4-like [Solanum lycopersicum]
Solyc04g071150.3.1	6531	47.577867596014	157.817051930738	1.72989057730272	0.0320305139797541	Up	0.000744811590453702	NA	GO:0005506//iron ion binding;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K01590//histidine decarboxylase [EC:4.1.1.22];K07437//cytochrome P450, family 26, subfamily A	gi|970024423|ref|XP_015073523.1|//PREDICTED: abscisic acid 8'-hydroxylase 3-like [Solanum pennellii];gi|460384149|ref|XP_004237776.1|//PREDICTED: abscisic acid 8'-hydroxylase 3-like [Solanum lycopersicum]
Solyc03g117800.3.1	2712	1663.189047697	5485.9738041412	1.72179557022885	0.00641857690706162	Up	9.37053783323892e-05	GO:0031224//intrinsic component of membrane	GO:0046914//transition metal ion binding;GO:0003824//catalytic activity	GO:0006631//fatty acid metabolic process	K15404//aldehyde decarbonylase [EC:4.1.99.5]	gi|460380260|ref|XP_004235875.1|//PREDICTED: protein ECERIFERUM 3 isoform X1 [Solanum lycopersicum];gi|971540250|ref|XP_015161680.1|//PREDICTED: protein ECERIFERUM 3-like isoform X2 [Solanum tuberosum];gi|565349424|ref|XP_006341693.1|//PREDICTED: protein ECERIFERUM 3-like isoform X1 [Solanum tuberosum]
Solyc08g074705.1.1	3196	8.98250388337278	62.0801402030976	2.78894225668638	0.000743304921651738	Up	7.18777005924283e-06	NA	NA	NA	K10875//DNA repair and recombination protein RAD54 and RAD54-like protein [EC:3.6.4.-]	gi|971570642|ref|XP_015169470.1|//PREDICTED: SNF2 domain-containing protein CLASSY 3-like [Solanum tuberosum];gi|971546964|ref|XP_015163320.1|//PREDICTED: SNF2 domain-containing protein CLASSY 4-like [Solanum tuberosum]
Solyc01g095930.3.1	2424	253.368323117407	1535.18062839901	2.59910034146497	0.0015828570088008	Up	1.71525310808078e-05	NA	NA	NA	K15406//wax-ester synthase / diacylglycerol O-acyltransferase [EC:2.3.1.75 2.3.1.20]	gi|723666756|ref|XP_010315460.1|//PREDICTED: LOW QUALITY PROTEIN: O-acyltransferase WSD1 [Solanum lycopersicum]
Solyc01g099870.2.1	1819	86.6244290414992	12.0391825446989	-2.84703650114466	3.61967845728453e-05	Down	2.4515262155669e-07	GO:0016020//membrane	NA	GO:0006810//transport	K15382//solute carrier family 50 (sugar transporter)	gi|970000276|ref|XP_015087137.1|//PREDICTED: bidirectional sugar transporter SWEET16-like [Solanum pennellii]
Solyc05g010670.3.1	2957	13073.121457917	5017.18199977241	-1.38165447495634	0.00655706214799601	Down	9.64672950245115e-05	GO:0044424//intracellular part	GO:0005515//protein binding;GO:0032559//adenyl ribonucleotide binding	GO:0044267//cellular protein metabolic process;GO:0050896//response to stimulus	K09487//heat shock protein 90kDa beta	gi|970029549|ref|XP_015076099.1|//PREDICTED: heat shock protein 90-5, chloroplastic [Solanum pennellii];gi|460386650|ref|XP_004239010.1|//PREDICTED: heat shock protein 81-1 [Solanum lycopersicum]
Solyc05g052050.1.1	705	426.435198007471	1245.0368833026	1.54579005337715	0.0375459438801414	Up	0.000940873636007606	GO:0043231//intracellular membrane-bounded organelle	GO:0001071//nucleic acid binding transcription factor activity;GO:0003676//nucleic acid binding	GO:0050794//regulation of cellular process;GO:0050896//response to stimulus;GO:0006351//transcription, DNA-templated	K13432//pathogenesis-related genes transcriptional activator PTI4;K09286//EREBP-like factor	gi|460388658|ref|XP_004239983.1|//PREDICTED: ethylene-responsive transcription factor 1 [Solanum lycopersicum]
Solyc03g116930.3.1	1918	150.350751309041	3.33457146536168	-5.49468689816298	4.78591581094259e-17	Down	8.82379029748229e-20	NA	NA	NA	K11267//sister chromatid cohesion protein PDS5	gi|723688388|ref|XP_010319093.1|//PREDICTED: uncharacterized protein LOC101246231 [Solanum lycopersicum]
Solyc08g066900.1.1	691	526.104656218592	12.5696947481841	-5.38732829869078	2.43618095637163e-14	Down	5.40823555803612e-17	NA	NA	NA	NA	gi|723722784|ref|XP_010325109.1|//PREDICTED: bark storage protein A [Solanum lycopersicum]
BGI_novel_G000224	1292	2.14830768614803	398.724377649266	7.53604736826859	5.72443997293292e-34	Up	3.23086125574722e-37	NA	NA	NA	NA	NA
Solyc12g017240.2.1	1111	632.693236673157	37.5904411359708	-4.07306842281354	4.28290992010239e-07	Down	2.03050250191106e-09	GO:0030312//external encapsulating structure;GO:0005576//extracellular region	GO:0016758//transferase activity, transferring hexosyl groups;GO:0016798//hydrolase activity, acting on glycosyl bonds	GO:0044042//glucan metabolic process	K08235//xyloglucan:xyloglucosyl transferase [EC:2.4.1.207]	gi|936976332|ref|NP_001234213.2|//xyloglucan endo-transglycosylase precursor [Solanum lycopersicum]
Solyc09g010530.3.1	2599	1119.53807232579	140.686138142155	-2.99235149959843	7.07188455928767e-05	Down	5.00249951893021e-07	NA	NA	NA	NA	gi|460401817|ref|XP_004246412.1|//PREDICTED: cation/H(+) antiporter 20 [Solanum lycopersicum]
Solyc06g008050.3.1	1796	44.4240228238622	184.984678239794	2.05799383394782	0.0229046801671261	Up	0.000486068390497766	NA	GO:0016709//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen;GO:0000166//nucleotide binding;GO:0050662//coenzyme binding	GO:0008152//metabolic process	K11816//indole-3-pyruvate monooxygenase [EC:1.14.13.168]	gi|1001184382|ref|NP_001307429.1|//probable indole-3-pyruvate monooxygenase YUCCA8 [Solanum lycopersicum];gi|970051645|ref|XP_015087420.1|//PREDICTED: probable indole-3-pyruvate monooxygenase YUCCA5 [Solanum pennellii]
Solyc05g012110.3.1	1287	968.160182750534	4493.07493235153	2.21438545509636	4.53069896737887e-06	Up	2.65940113222374e-08	NA	NA	GO:0006007//glucose catabolic process	K01057//6-phosphogluconolactonase [EC:3.1.1.31]	gi|460386704|ref|XP_004239036.1|//PREDICTED: probable 6-phosphogluconolactonase 1 [Solanum lycopersicum]
Solyc11g020290.2.1	1931	5.60130504140077	850.477572360619	7.24636638323514	2.30718349112743e-40	Up	7.81301554733297e-44	GO:0043231//intracellular membrane-bounded organelle;GO:0005634//nucleus	NA	NA	K01595//phosphoenolpyruvate carboxylase [EC:4.1.1.31];K10752//histone-binding protein RBBP4	gi|970004273|ref|XP_015062931.1|//PREDICTED: WD-40 repeat-containing protein MSI1 [Solanum pennellii];gi|723742881|ref|XP_010312862.1|//PREDICTED: WD-40 repeat-containing protein MSI1-like [Solanum lycopersicum];gi|460382446|ref|XP_004236950.1|//PREDICTED: phosphoenolpyruvate carboxylase 4 [Solanum lycopersicum]
BGI_novel_G000011	665	24.3698103786681	3.29734312554428	-2.88571909696744	0.00907261418120373	Down	0.000143717145286781	NA	NA	NA	NA	NA
Solyc11g012480.2.1	1419	478.09139753347	227.226230021222	-1.07315706401815	0.0339835620908652	Down	0.000820914582621646	NA	NA	NA	K00857//thymidine kinase [EC:2.7.1.21]	gi|460409708|ref|XP_004250280.1|//PREDICTED: thymidine kinase-like [Solanum lycopersicum]
Solyc03g019950.3.1	2768	1192.21639611811	2894.62523291189	1.27973045518088	0.00522993538722051	Up	7.27217821414265e-05	NA	NA	NA	NA	gi|460377092|ref|XP_004234329.1|//PREDICTED: uncharacterized protein LOC101254569 isoform X1 [Solanum lycopersicum];gi|723684385|ref|XP_010317550.1|//PREDICTED: uncharacterized protein LOC101254569 isoform X2 [Solanum lycopersicum];gi|823157356|ref|XP_012478572.1|//PREDICTED: uncharacterized protein LOC105794121 isoform X1 [Gossypium raimondii]
Solyc05g006550.3.1	2736	225.951252623639	897.427382227925	1.98978364906169	0.0112838491131866	Up	0.00019082459264708	NA	NA	NA	K20221//importin-4	gi|460386096|ref|XP_004238736.1|//PREDICTED: microtubule-associated protein TORTIFOLIA1-like [Solanum lycopersicum]
Solyc05g012580.1.1	440	4201.60630194325	15613.8874417081	1.89381688430081	0.000114584167197731	Up	8.4072365592646e-07	NA	NA	NA	NA	gi|970031369|ref|XP_015076969.1|//PREDICTED: uncharacterized protein LOC107020943 [Solanum pennellii]
Solyc11g012120.2.1	2894	59.8930560955752	12.4483940748636	-2.26642911187181	0.0452034848905878	Down	0.00124659968693184	NA	NA	NA	NA	gi|460409658|ref|XP_004250255.1|//PREDICTED: uncharacterized protein LOC101253249 [Solanum lycopersicum]
Solyc09g065180.3.1	1406	22582.2431968473	8733.27065393093	-1.37059484594661	6.80553202701093e-08	Down	2.73993274970903e-10	NA	GO:0048037//cofactor binding	GO:0008152//metabolic process	NA	gi|936975812|ref|NP_001234656.2|//mRNA binding protein precursor [Solanum lycopersicum]
Solyc08g007060.3.1	3385	294.191278811795	78.5923357721249	-1.90429394447176	0.00944998448174266	Down	0.000151117259462717	GO:0044464//cell part	NA	GO:0015833//peptide transport	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460397987|ref|XP_004244546.1|//PREDICTED: protein NRT1/ PTR FAMILY 7.3 [Solanum lycopersicum]
Solyc12g009880.1.1	495	96.3492271670488	290.032190044793	1.58986803113896	0.047810258708953	Up	0.00134563216250255	NA	NA	NA	NA	gi|460412707|ref|XP_004251739.1|//PREDICTED: uncharacterized protein LOC101264293 [Solanum lycopersicum]
Solyc07g007720.3.1	520	58.5733677132394	1.99293531168159	-4.87727805762794	6.93135861014281e-10	Down	2.26898520932545e-12	NA	NA	NA	NA	gi|971572300|ref|XP_015169921.1|//PREDICTED: uncharacterized protein LOC107063036 [Solanum tuberosum]
Solyc04g009473.1.1	1767	259.344139528209	550.880222934493	1.08687090077381	0.0338486161842662	Up	0.000807465954051427	NA	NA	NA	K14972//PAX-interacting protein 1	gi|460382189|ref|XP_004236822.1|//PREDICTED: mediator of RNA polymerase II transcription subunit 15a isoform X2 [Solanum lycopersicum];gi|723689692|ref|XP_010319302.1|//PREDICTED: mediator of RNA polymerase II transcription subunit 15a isoform X1 [Solanum lycopersicum]
Solyc12g021230.2.1	3289	3982.42792946573	1775.42962576959	-1.1654800771919	0.00673949428143306	Down	0.00010219423544484	GO:0043232//intracellular non-membrane-bounded organelle;GO:0009536//plastid;GO:0005694//chromosome;GO:0005739//mitochondrion;GO:0009507//chloroplast	GO:0003677//DNA binding;GO:0046872//metal ion binding;GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0003918//DNA topoisomerase type II (ATP-hydrolyzing) activity;GO:0003916//DNA topoisomerase activity	GO:0006259//DNA metabolic process;GO:0006265//DNA topological change	K02470//DNA gyrase subunit B [EC:5.99.1.3]	gi|970068438|ref|XP_015061345.1|//PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial [Solanum pennellii];gi|460413275|ref|XP_004252016.1|//PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial [Solanum lycopersicum]
Solyc06g051940.3.1	1707	350.947153916551	830.305269208887	1.24238804984298	0.0183967141967035	Up	0.000365483880643393	NA	GO:0003824//catalytic activity	NA	K14497//protein phosphatase 2C [EC:3.1.3.16]	gi|460390679|ref|XP_004240955.1|//PREDICTED: probable protein phosphatase 2C 51 [Solanum lycopersicum]
Solyc06g068620.3.1	2666	635.109159157001	3698.32536292792	2.54179567149862	1.35829434164283e-05	Up	8.48390942215862e-08	NA	NA	NA	K08873//serine/threonine-protein kinase SMG1 [EC:2.7.11.1]	gi|460392127|ref|XP_004241669.1|//PREDICTED: uncharacterized protein LOC101254501 [Solanum lycopersicum]
Solyc10g085870.1.1	1461	608.132252655407	149.925005641749	-2.02014407865086	0.0439891958917742	Down	0.00118840511157369	NA	NA	NA	K13496//UDP-glucosyl transferase 73C [EC:2.4.1.-]	gi|460408374|ref|XP_004249620.1|//PREDICTED: UDP-glycosyltransferase 73C3-like [Solanum lycopersicum]
Solyc10g085880.1.1	1035	1349.67090932068	274.801973496911	-2.29614340731858	0.0200979636171643	Down	0.000404575781133421	NA	NA	NA	K13496//UDP-glucosyl transferase 73C [EC:2.4.1.-]	gi|460408370|ref|XP_004249618.1|//PREDICTED: UDP-glycosyltransferase 73C3-like [Solanum lycopersicum]
BGI_novel_G000506	3213	1.86692710295859	67.6485104649958	5.17932066669492	7.19150485307864e-12	Up	1.86707993702233e-14	NA	NA	NA	NA	NA
Solyc06g048637.1.1	2422	118.004088652948	382.931979649229	1.69825130091919	0.0205174121014206	Up	0.000420739345873282	NA	NA	NA	K12585//exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-]	gi|970008265|ref|XP_015065012.1|//PREDICTED: exosome complex exonuclease RRP44 [Solanum pennellii];gi|698525079|ref|XP_009759351.1|//PREDICTED: exosome complex exonuclease RRP44 [Nicotiana sylvestris]
Solyc12g013620.2.1	1557	1428.10955634257	6346.51680882897	2.15185834854692	0.000197291976226046	Up	1.54406934774495e-06	NA	GO:0003676//nucleic acid binding	NA	K12581//CCR4-NOT transcription complex subunit 7/8;K13126//polyadenylate-binding protein;K05941//glutathione gamma-glutamylcysteinyltransferase [EC:2.3.2.15];K01054//acylglycerol lipase [EC:3.1.1.23]	gi|350536069|ref|NP_001233972.1|//jasmonic acid 2 [Solanum lycopersicum]
Solyc03g097230.1.1	585	162.019449593527	55.694648436173	-1.54055639728679	0.0452034848905878	Down	0.00124527627529638	NA	NA	NA	K19761//gamma-glutamylaminecyclotransferase [EC:2.3.2.-]	gi|460379216|ref|XP_004235360.1|//PREDICTED: putative gamma-glutamylcyclotransferase At3g02910 [Solanum lycopersicum]
Solyc02g077970.3.1	1073	349.564613636933	69.2640211885266	-2.33538109636026	0.00332440487306111	Down	4.07779654821057e-05	NA	NA	NA	NA	gi|723674766|ref|XP_010316759.1|//PREDICTED: late embryogenesis abundant protein 76-like [Solanum lycopersicum]
Solyc03g115650.3.1	1100	503.393478736364	3412.9259099666	2.76125066361853	1.49646686343298e-08	Up	5.44091502482505e-11	NA	GO:0008135//translation factor activity, RNA binding;GO:0043021//ribonucleoprotein complex binding	GO:0018205//peptidyl-lysine modification;GO:0006449//regulation of translational termination;GO:0006448//regulation of translational elongation	K02180//cell cycle arrest protein BUB3;K03263//translation initiation factor 5A	gi|350536367|ref|NP_001234499.1|//eukaryotic translation initiation factor 5A-1 [Solanum lycopersicum]
Solyc09g011530.2.1	503	20.889064213029	2.7488152971776	-2.92586598875923	0.00505394498581466	Down	6.97895853480069e-05	NA	GO:0016765//transferase activity, transferring alkyl or aryl (other than methyl) groups;GO:0016740//transferase activity	GO:0009755//hormone-mediated signaling pathway	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|565404501|ref|XP_006367676.1|//PREDICTED: probable glutathione S-transferase [Solanum tuberosum];gi|723727223|ref|XP_010325822.1|//PREDICTED: LOW QUALITY PROTEIN: probable glutathione S-transferase [Solanum lycopersicum]
Solyc11g069960.2.1	2593	1325.36802099058	265.339400231437	-2.32048219273921	1.21021784175469e-05	Down	7.51348699588077e-08	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460411557|ref|XP_004251175.1|//PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g68400 [Solanum lycopersicum]
Solyc10g007440.3.1	1765	330.065939052945	126.385847624081	-1.38491934511186	0.0209800898367971	Down	0.000433384856093675	NA	NA	NA	K02350//DNA polymerase zeta [EC:2.7.7.7]	gi|460405541|ref|XP_004248234.1|//PREDICTED: uncharacterized protein LOC101258699 [Solanum lycopersicum]
Solyc04g057850.1.1	765	14.2315556637637	1.86360247599014	-2.93292731529402	0.00763622603464395	Down	0.000117193846961614	NA	NA	NA	K13459//disease resistance protein RPS2	gi|971555842|ref|XP_015165543.1|//PREDICTED: probable disease resistance protein At1g12280 isoform X6 [Solanum tuberosum]
Solyc09g005480.3.1	2700	347.598700123145	1102.42875091837	1.66519082639185	0.000245313429506566	Up	2.02143361033743e-06	NA	NA	NA	K08678//UDP-glucuronate decarboxylase [EC:4.1.1.35]	gi|460402512|ref|XP_004246756.1|//PREDICTED: putative F-box protein At3g16210 isoform X9 [Solanum lycopersicum];gi|723728736|ref|XP_010326064.1|//PREDICTED: putative F-box protein At3g16210 isoform X3 [Solanum lycopersicum]
Solyc02g077880.3.1	867	1671.77942032276	9265.26848673198	2.47044827653945	0.000169030438192708	Up	1.31016556675689e-06	NA	NA	NA	NA	gi|1000814558|ref|NP_001307367.1|//auxin repressed/dormancy associated protein [Solanum lycopersicum]
Solyc08g079600.3.1	590	628.146594713972	197.168987748718	-1.67166863825469	0.000781654887553494	Down	7.64684767896709e-06	NA	NA	NA	NA	gi|460400355|ref|XP_004245700.1|//PREDICTED: uncharacterized protein At4g22758-like [Solanum lycopersicum]
Solyc01g080580.3.1	3580	167.134921311087	382.450818457465	1.19426103249926	0.0406841614932843	Up	0.00106084674398337	NA	NA	NA	K14319//Ran GTPase-activating protein 1	gi|971582779|ref|XP_006365268.2|//PREDICTED: uncharacterized protein LOC102590399 [Solanum tuberosum];gi|460367246|ref|XP_004229486.1|//PREDICTED: uncharacterized protein LOC101245199 isoform X1 [Solanum lycopersicum]
Solyc05g051450.2.1	1040	23.0776488642889	2.59660951863993	-3.15179526947612	0.0011767590769731	Down	1.23976574313304e-05	NA	NA	NA	NA	gi|723702310|ref|XP_010321483.1|//PREDICTED: uncharacterized protein LOC101258372 [Solanum lycopersicum]
BGI_novel_G000421	2550	119.703699650802	18.6620310676603	-2.6812898275254	3.10567163927984e-07	Down	1.42563848437423e-09	NA	NA	NA	K06228//fused [EC:2.7.11.1];K16570//gamma-tubulin complex component 3;K14560//U3 small nucleolar ribonucleoprotein protein IMP3;K03549//KUP system potassium uptake protein;K17982//geranyllinalool synthase [EC:4.2.3.144]	gi|970056132|ref|XP_015089713.1|//PREDICTED: uncharacterized protein LOC107032636 [Solanum pennellii]
Solyc02g084037.1.1	4921	96.3721945665977	2648.99836738328	4.78068618612314	5.57665043229561e-16	Up	1.07013271643555e-18	NA	NA	NA	K05909//laccase [EC:1.10.3.2];K08739//DNA mismatch repair protein MLH3	gi|723672638|ref|XP_010316420.1|//PREDICTED: uncharacterized protein LOC104645760 [Solanum lycopersicum];gi|723673065|ref|XP_010316469.1|//PREDICTED: DNA mismatch repair protein MLH3 isoform X1 [Solanum lycopersicum];gi|971566366|ref|XP_015168279.1|//PREDICTED: uncharacterized protein LOC107062294 [Solanum tuberosum];gi|970008023|ref|XP_015064942.1|//PREDICTED: DNA mismatch repair protein MLH3-like isoform X2 [Solanum pennellii]
Solyc01g108790.2.1	1449	65.5137677149505	269.806528062435	2.04205522930142	0.0142667965112969	Up	0.000258517356181518	NA	NA	NA	K05605//3-hydroxyisobutyryl-CoA hydrolase [EC:3.1.2.4]	gi|971563168|ref|XP_006354604.2|//PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase 1-like [Solanum tuberosum];gi|698496693|ref|XP_009794379.1|//PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase 1-like isoform X2 [Nicotiana sylvestris]
Solyc02g071700.3.1	1299	244.40270389374	51.7673712677275	-2.23914528064259	0.0431789989340371	Down	0.00115471262481365	NA	NA	NA	K21026;K17604//zinc finger SWIM domain-containing protein 3;K01188//beta-glucosidase [EC:3.2.1.21];K00679//phospholipid:diacylglycerol acyltransferase [EC:2.3.1.158];K10960//geranylgeranyl reductase [EC:1.3.1.83]	gi|723678299|ref|XP_004233010.2|//PREDICTED: uncharacterized protein LOC101263269 [Solanum lycopersicum]
Solyc09g008320.3.1	1173	338.316776399925	845.315802657635	1.32111570141833	0.00988256564469686	Up	0.000160265861190667	GO:0030312//external encapsulating structure;GO:0005576//extracellular region	GO:0016758//transferase activity, transferring hexosyl groups;GO:0016798//hydrolase activity, acting on glycosyl bonds	GO:0044042//glucan metabolic process	K08235//xyloglucan:xyloglucosyl transferase [EC:2.4.1.207]	gi|460402227|ref|XP_004246615.1|//PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 32 [Solanum lycopersicum]
Solyc12g006225.1.1	591	23.7222246458329	98.9201838757975	2.06002561076949	0.000210982779471834	Up	1.66709499526226e-06	NA	NA	NA	NA	gi|970065279|ref|XP_015059600.1|//PREDICTED: uncharacterized protein LOC107005505 [Solanum pennellii]
Solyc07g051880.1.1	981	6.03058115082235	40.7690417783225	2.75710510604888	0.00571902436983343	Up	8.04799305533996e-05	NA	NA	NA	K20716	gi|460396588|ref|XP_004243853.1|//PREDICTED: mitogen-activated protein kinase kinase kinase A-like [Solanum lycopersicum]
Solyc07g009440.2.1	834	2.8085067100656	46.9035593192972	4.06182225221069	2.03692469079156e-06	Up	1.12664307313226e-08	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460394941|ref|XP_004243048.1|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 [Solanum lycopersicum]
Solyc04g081600.2.1	370	361.403535622132	2.42132339503776	-7.22167102958344	2.50364556506783e-33	Down	1.60145895346176e-36	NA	NA	NA	NA	NA
Solyc03g006780.2.1	1715	87.1756504871532	7.65081606752521	-3.51023967922682	1.88601456424152e-06	Down	1.02188394947052e-08	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1];K05349//beta-glucosidase [EC:3.2.1.21]	gi|970015108|ref|XP_015068563.1|//PREDICTED: uncharacterized protein LOC107013090 [Solanum pennellii]
Solyc09g075570.1.1	429	181.095616449374	386.648218170578	1.09426993931626	0.035874570842553	Up	0.000886841744499279	NA	NA	NA	NA	gi|723731234|ref|XP_010326563.1|//PREDICTED: uncharacterized protein LOC101262251 [Solanum lycopersicum]
Solyc02g071720.2.1	1423	430.723812667776	68.3869636223259	-2.65496984520813	0.00222304998468926	Down	2.57436317327967e-05	NA	NA	NA	K21026;K17604//zinc finger SWIM domain-containing protein 3;K00679//phospholipid:diacylglycerol acyltransferase [EC:2.3.1.158];K10960//geranylgeranyl reductase [EC:1.3.1.83]	gi|460374399|ref|XP_004232998.1|//PREDICTED: GDSL esterase/lipase At1g29670-like [Solanum lycopersicum]
Solyc10g086690.2.1	1850	68.3301912688626	211.030741972425	1.62685810901278	0.00512917222109201	Up	7.10213860617022e-05	NA	NA	NA	K07456//DNA mismatch repair protein MutS2;K04714//shingomyelin synthase [EC:2.7.8.27]	gi|460408344|ref|XP_004249605.1|//PREDICTED: phosphatidylinositol:ceramide inositolphosphotransferase 1-like [Solanum lycopersicum]
Solyc01g110920.3.1	261	17.3812714544696	1.73303644508431	-3.32615972110823	0.000929538679424578	Down	9.33840641932356e-06	NA	NA	NA	K14488//SAUR family protein	gi|723666182|ref|XP_010315351.1|//PREDICTED: auxin-induced protein 15A-like [Solanum lycopersicum]
Solyc06g068500.3.1	1679	508.520431296714	3125.70626313897	2.61980456322459	0.00268641955992071	Up	3.24468780800899e-05	NA	GO:0005515//protein binding	GO:0044267//cellular protein metabolic process;GO:0050896//response to stimulus	K03686//molecular chaperone DnaJ;K09506//DnaJ homolog subfamily A member 5	gi|460392142|ref|XP_004241676.1|//PREDICTED: chaperone protein dnaJ 8, chloroplastic-like [Solanum lycopersicum]
Solyc04g014330.1.1	327	144.292447230821	29.1299845530055	-2.30841894456143	0.0100063417586341	Down	0.000163736930645778	NA	NA	NA	NA	gi|723690973|ref|XP_010319535.1|//PREDICTED: RNA-binding protein 12-like [Solanum lycopersicum]
Solyc08g074650.3.1	1557	38.1041395518268	7.09776915702639	-2.42451017847031	0.0339402477683006	Down	0.000812760077560023	GO:0009579//thylakoid;GO:0009507//chloroplast	GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K00422//polyphenol oxidase [EC:1.10.3.1]	gi|970045032|ref|XP_015083938.1|//PREDICTED: polyphenol oxidase E, chloroplastic-like [Solanum pennellii]
Solyc06g063330.3.1	3477	967.566187972902	263.442547454968	-1.87687198679869	0.0168927232234252	Down	0.000325434559596406	GO:0033176//proton-transporting V-type ATPase complex	GO:0032559//adenyl ribonucleotide binding;GO:0019829//cation-transporting ATPase activity;GO:0015078//hydrogen ion transmembrane transporter activity	GO:0015988//energy coupled proton transmembrane transport, against electrochemical gradient;GO:0015986//ATP synthesis coupled proton transport	K02145//V-type H+-transporting ATPase subunit A [EC:3.6.3.14]	gi|928192543|ref|NP_001234287.2|//vacuolar H+-ATPase A2 subunit isoform [Solanum lycopersicum]
Solyc08g077510.3.1	1602	1174.09835094161	2810.66390645913	1.25935768541204	1.54954869780553e-05	Up	9.91170104326825e-08	NA	NA	NA	K14648//poly(U)-specific endoribonuclease [EC:3.1.-.-]	gi|460400650|ref|XP_004245846.1|//PREDICTED: poly(U)-specific endoribonuclease-B isoform X1 [Solanum lycopersicum];gi|460400652|ref|XP_004245847.1|//PREDICTED: poly(U)-specific endoribonuclease-B isoform X2 [Solanum lycopersicum]
Solyc03g117080.3.1	1182	226.427334261411	94.6224765049432	-1.25879330516834	0.0127541260245425	Down	0.000225069989295649	NA	NA	NA	K15414//complement component 1 Q subcomponent-binding protein, mitochondrial	gi|460380369|ref|XP_004235929.1|//PREDICTED: uncharacterized protein At2g39795, mitochondrial [Solanum lycopersicum]
Solyc02g071110.3.1	1459	584.549921657497	287.956515442911	-1.02147527335867	0.0419704211537582	Down	0.00109912379587672	NA	NA	NA	NA	gi|460374574|ref|XP_004233085.1|//PREDICTED: probable purine permease 10 [Solanum lycopersicum]
Solyc01g109690.1.1	673	426.003355048146	42.5036749996525	-3.32520530099283	4.36532147127442e-06	Down	2.52947852118847e-08	NA	NA	NA	NA	gi|460370277|ref|XP_004230980.1|//PREDICTED: protein RADIALIS-like 4 [Solanum lycopersicum]
Solyc01g015285.1.1	2334	2.13295769408968	299.310407322054	7.13264328244241	5.641930312945e-29	Up	4.8825825788364e-32	NA	NA	NA	NA	gi|565353569|ref|XP_006343702.1|//PREDICTED: uncharacterized protein LOC102605937 [Solanum tuberosum]
Solyc09g014710.3.1	3901	70.9550269355348	7.71324763265158	-3.20149456395643	0.000245313429506566	Down	2.01998333207152e-06	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460401629|ref|XP_004246320.1|//PREDICTED: wall-associated receptor kinase 2-like [Solanum lycopersicum]
Solyc04g071620.3.1	1183	3094.98416637421	18322.1244454604	2.56558285935102	1.21158192803585e-09	Up	4.01170973650732e-12	NA	NA	GO:0006950//response to stress	K12741//heterogeneous nuclear ribonucleoprotein A1/A3;K01640//hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4];K12813//pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:3.6.4.13]	gi|536291024|ref|NP_001269248.1|//Abscicic acid stress ripening protein 4 [Solanum lycopersicum]
Solyc03g005770.3.1	909	24652.4111536119	66475.5045162773	1.43109406373937	0.000454447918090565	Up	4.1038303925099e-06	GO:0031224//intrinsic component of membrane;GO:0009521//photosystem;GO:0009534//chloroplast thylakoid	GO:0043169//cation binding;GO:0046906//tetrapyrrole binding	GO:0006464//cellular protein modification process;GO:0006091//generation of precursor metabolites and energy	K08912//light-harvesting complex II chlorophyll a/b binding protein 1	gi|460376914|ref|XP_004234241.1|//PREDICTED: uncharacterized protein LOC101245729 [Solanum lycopersicum]
Solyc09g010800.4.1	850	12205.6298660481	79804.6813387593	2.70892663068158	1.1745922765852e-07	Up	5.03832334464812e-10	NA	GO:0046872//metal ion binding	NA	NA	gi|970052567|ref|XP_015087895.1|//PREDICTED: metallothionein-like protein type 2 B [Solanum pennellii];gi|914615145|ref|NP_001234046.2|//metallothionein-like protein type 2 B [Solanum lycopersicum]
Solyc04g009540.1.1	690	5329.15637601126	2477.25074882536	-1.10516726097326	0.0391617222450277	Down	0.00099137994232592	GO:0030529//intracellular ribonucleoprotein complex;GO:0009536//plastid	GO:0003723//RNA binding	GO:0022613//ribonucleoprotein complex biogenesis;GO:0010467//gene expression	K02864//large subunit ribosomal protein L10	gi|460382179|ref|XP_004236817.1|//PREDICTED: 50S ribosomal protein L10, chloroplastic [Solanum lycopersicum]
Solyc07g045140.3.1	2181	35.0134272473167	172.050544259907	2.29685226559946	3.7273116577758e-08	Up	1.43050678817448e-10	GO:0016021//integral component of membrane	NA	GO:0003006//developmental process involved in reproduction;GO:0010228//vegetative to reproductive phase transition of meristem	NA	gi|460396073|ref|XP_004243604.1|//PREDICTED: uncharacterized membrane protein At3g27390 [Solanum lycopersicum];gi|970039436|ref|XP_015081055.1|//PREDICTED: uncharacterized membrane protein At3g27390 [Solanum pennellii]
BGI_novel_G000173	1656	276.45953340001	1.98705300460767	-7.12029415509032	5.641930312945e-29	Down	4.84578421859308e-32	NA	NA	NA	K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6];K20093//DNA excision repair protein ERCC-6-like [EC:3.6.4.12];K03549//KUP system potassium uptake protein;K12447//UDP-sugar pyrophosphorylase [EC:2.7.7.64];K05658//ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:3.6.3.44]	gi|657950973|ref|XP_008350549.1|//PREDICTED: uncharacterized protein LOC103413885 [Malus domestica]
Solyc04g081710.2.1	712	3531.82203951286	5.82747485091999	-9.24332606208946	1.61072752677825e-71	Down	6.06060701651146e-76	NA	NA	NA	NA	NA
Solyc02g062350.3.1	2056	1426.71353632423	642.302931719426	-1.15136990476614	0.0112928918785616	Down	0.000192060320168185	NA	GO:0005515//protein binding	NA	K10523//speckle-type POZ protein;K02327//DNA polymerase delta subunit 1 [EC:2.7.7.7]	gi|460375511|ref|XP_004233549.1|//PREDICTED: uncharacterized protein LOC101249520 [Solanum lycopersicum]
Solyc06g082020.3.1	489	72.9202628634376	13.9851718172992	-2.38242178361509	0.0159393432596168	Down	0.000299871002363262	NA	NA	NA	NA	gi|460393848|ref|XP_004242520.1|//PREDICTED: protein PSY1 [Solanum lycopersicum]
Solyc10g005400.3.1	1342	1325.90334532516	102.851093406842	-3.68834657451412	1.17031457296012e-08	Down	4.18331205294845e-11	GO:0044424//intracellular part	GO:0016701//oxidoreductase activity, acting on single donors with incorporation of molecular oxygen;GO:0046914//transition metal ion binding	GO:0006020//inositol metabolic process	K00469//inositol oxygenase [EC:1.13.99.1]	gi|460405858|ref|XP_004248391.1|//PREDICTED: inositol oxygenase 1-like [Solanum lycopersicum]
Solyc01g015070.3.1	2697	2.32955213768739	504.434341515153	7.75847006663705	2.89388822069217e-36	Up	1.52441716859278e-39	NA	NA	NA	NA	NA
Solyc10g081590.2.1	1084	283.761245636742	135.49357648275	-1.06645311093729	0.039583770307697	Down	0.00100981285580083	NA	NA	NA	NA	gi|460407890|ref|XP_004249382.1|//PREDICTED: N(6)-adenine-specific DNA methyltransferase 2 [Solanum lycopersicum]
Solyc03g062745.1.1	654	55.6385286731111	10.4401537998851	-2.41394130396461	0.00937596664506231	Down	0.000149580835214901	NA	NA	GO:0006397//mRNA processing	K12621//U6 snRNA-associated Sm-like protein LSm2	gi|13785213|emb|CAC37358.1|//putative membrane protein [Solanum tuberosum];gi|723681832|ref|XP_010317952.1|//PREDICTED: U6 snRNA-associated Sm-like protein LSm2 [Solanum lycopersicum];gi|723681513|ref|XP_010317893.1|//PREDICTED: uncharacterized protein LOC104646294 [Solanum lycopersicum]
Solyc04g008970.3.1	3236	81.5532468478843	325.406478656552	1.99642875387502	0.0145184993771363	Up	0.000266038649835022	NA	NA	NA	K10268//F-box and leucine-rich repeat protein 2/20	gi|460382257|ref|XP_004236856.1|//PREDICTED: F-box/LRR-repeat protein 2 [Solanum lycopersicum]
Solyc02g084120.2.1	12066	148.829872747332	498.416859430486	1.74368874020672	0.00082962995006543	Up	8.20983093905287e-06	NA	NA	NA	K08739//DNA mismatch repair protein MLH3;K05658//ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:3.6.3.44];K03544//ATP-dependent Clp protease ATP-binding subunit ClpX	gi|971582564|ref|XP_006365142.2|//PREDICTED: uncharacterized protein LOC102600784 [Solanum tuberosum];gi|723672593|ref|XP_010316416.1|//PREDICTED: uncharacterized protein LOC104645754 isoform X2 [Solanum lycopersicum]
Solyc06g053640.1.1	855	37.1724480178884	8.5960529093094	-2.11248743323689	0.0214090970730082	Down	0.000443857940596288	NA	NA	NA	K19041//E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27]	gi|460390799|ref|XP_004241012.1|//PREDICTED: RING-H2 finger protein ATL16-like [Solanum lycopersicum]
Solyc12g017380.2.1	1572	187.507651393934	541.379315391516	1.52969030012228	0.039841878509471	Up	0.00102011059941222	NA	NA	NA	K08202//MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 4/5	gi|460413535|ref|XP_004252143.1|//PREDICTED: organic cation/carnitine transporter 3-like [Solanum lycopersicum]
Solyc05g051460.3.1	1680	403.294881626196	178.26279493241	-1.17782946525463	0.0372059947166073	Down	0.000929554896783957	NA	NA	NA	K09338//homeobox-leucine zipper protein	gi|460388744|ref|XP_004240025.1|//PREDICTED: homeobox-leucine zipper protein ATHB-6 [Solanum lycopersicum]
Solyc06g076670.3.1	7157	949.247624567876	2164.27779157474	1.18902929659595	0.039841878509471	Up	0.0010208947309685	NA	GO:0005488//binding	NA	K17362//acyl-coenzyme A thioesterase 13 [EC:3.1.2.-];K12897//transformer-2 protein	gi|460391142|ref|XP_004241182.1|//PREDICTED: serine/arginine-rich splicing factor SR45a [Solanum lycopersicum]
Solyc03g094020.3.1	2898	134.734220303483	22.0248729292787	-2.61291071767734	0.0123123936693719	Down	0.000214958447627217	NA	GO:0004558//alpha-1,4-glucosidase activity	GO:0008152//metabolic process	K01187//alpha-glucosidase [EC:3.2.1.20]	gi|460378890|ref|XP_004235201.1|//PREDICTED: putative alpha-xylosidase 2 [Solanum lycopersicum]
Solyc11g032133.1.1	3506	57.9250493244414	292.207230789035	2.33473260598034	5.3669762660664e-08	Up	2.10018260778457e-10	GO:0005622//intracellular	GO:0010181//FMN binding;GO:0003959//NADPH dehydrogenase activity	GO:0055114//oxidation-reduction process	K05894//12-oxophytodienoic acid reductase [EC:1.3.1.42]	gi|971564890|ref|XP_015167893.1|//PREDICTED: uncharacterized protein LOC107062130 [Solanum tuberosum];gi|460410474|ref|XP_004250653.1|//PREDICTED: 12-oxophytodienoate reductase 1-like isoform X1 [Solanum lycopersicum];gi|723743545|ref|XP_010312987.1|//PREDICTED: putative 12-oxophytodienoate reductase-like protein 1 isoform X2 [Solanum lycopersicum]
Solyc03g098240.3.1	2464	251.638830516064	779.611649869282	1.63140108679204	0.031731229652465	Up	0.000735464404030495	GO:0009506//plasmodesma	GO:0016831//carboxy-lyase activity;GO:0004351//glutamate decarboxylase activity;GO:0005515//protein binding;GO:0048037//cofactor binding;GO:0005516//calmodulin binding;GO:0030170//pyridoxal phosphate binding	GO:0009064//glutamine family amino acid metabolic process;GO:0006536//glutamate metabolic process	K01580//glutamate decarboxylase [EC:4.1.1.15]	gi|922959877|ref|NP_001234041.2|//glutamate decarboxylase [Solanum lycopersicum]
Solyc09g064790.3.1	1280	1253.83701780384	431.36529883869	-1.5393678003471	0.000946797518517956	Down	9.54741825498785e-06	NA	NA	NA	NA	gi|460403328|ref|XP_004247143.1|//PREDICTED: protein PALE CRESS, chloroplastic [Solanum lycopersicum]
Solyc07g054730.1.1	291	475.617886331414	1406.46936445655	1.56420325243834	0.000541663048826331	Up	5.07484287759177e-06	NA	NA	NA	NA	gi|970038680|ref|XP_015080672.1|//PREDICTED: uncharacterized protein LOC107024246 [Solanum pennellii]
Solyc08g062960.3.1	2558	136.678059282952	543.030162800696	1.99025066732543	1.93617990439903e-05	Up	1.26761975906021e-07	GO:0043231//intracellular membrane-bounded organelle;GO:0005634//nucleus	GO:0003677//DNA binding;GO:0043565//sequence-specific DNA binding;GO:0003700//transcription factor activity, sequence-specific DNA binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0006355//regulation of transcription, DNA-templated;GO:0050896//response to stimulus;GO:0006351//transcription, DNA-templated	K09419//heat shock transcription factor, other eukaryote	gi|723722314|ref|XP_010325031.1|//PREDICTED: heat shock factor protein HSF30 isoform X2 [Solanum lycopersicum];gi|723722307|ref|XP_010325030.1|//PREDICTED: heat shock factor protein HSF30 isoform X1 [Solanum lycopersicum]
Solyc06g008780.2.1	1311	24.55402522473	2.49763507573121	-3.29732494154185	0.000435877089881997	Down	3.9033279674875e-06	NA	GO:0043178//alcohol binding	GO:0009755//hormone-mediated signaling pathway	K14485//transport inhibitor response 1	gi|565394679|ref|XP_006362984.1|//PREDICTED: protein TRANSPORT INHIBITOR RESPONSE 1-like isoform X2 [Solanum tuberosum]
Solyc09g014410.3.1	3940	264.612200724568	897.996463772088	1.76283018092401	0.00225497145971094	Up	2.63912030692472e-05	NA	NA	NA	K18998//RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:3.1.3.16];K04688//p70 ribosomal S6 kinase [EC:2.7.11.1]	gi|460401652|ref|XP_004246331.1|//PREDICTED: BTB/POZ domain-containing protein At3g09030 [Solanum lycopersicum]
Solyc01g066260.2.1	542	45.3812897776674	195.614110383087	2.10784092365964	0.00763622603464395	Up	0.000117228438956042	NA	NA	NA	NA	NA
Solyc07g041830.3.1	1216	628.044089242086	1745.04937426605	1.47433011025977	0.00455271362211998	Up	6.13263903645616e-05	NA	NA	NA	NA	gi|460396292|ref|XP_004243710.1|//PREDICTED: uncharacterized protein LOC101253102 [Solanum lycopersicum]
Solyc02g068170.1.1	501	13.5693063835635	81.4828677275497	2.58614977873634	0.0126425696804078	Up	0.000222149980838712	NA	NA	NA	NA	gi|802539270|ref|XP_012070196.1|//PREDICTED: uncharacterized protein LOC105632422 [Jatropha curcas]
BGI_novel_G000205	1028	1433.82596940433	218.063144769534	-2.71705206428462	0.0104057769545361	Down	0.000172666126235107	NA	NA	NA	NA	NA
Solyc09g005120.3.1	2261	122.387964829173	408.310594128405	1.73820530475674	0.0496218566767618	Up	0.00141152589260007	NA	NA	NA	K03686//molecular chaperone DnaJ;K10863//aprataxin [EC:3.-.-.-]	gi|460402555|ref|XP_004246777.1|//PREDICTED: dnaJ protein ERDJ3A [Solanum lycopersicum]
Solyc11g022590.1.1	678	19062.6603391806	4768.97420401018	-1.99899858821539	0.000723328681673192	Down	6.94016682946398e-06	NA	GO:0061135//endopeptidase regulator activity	GO:0010466//negative regulation of peptidase activity	NA	gi|350537105|ref|NP_001233769.1|//uncharacterized protein LOC544001 precursor [Solanum lycopersicum]
Solyc12g008380.1.1	654	56.2169424960528	218.341783693193	1.95751134656817	0.00210445281787997	Up	2.38951087090381e-05	NA	NA	NA	K03350//anaphase-promoting complex subunit 3	gi|460412486|ref|XP_004251629.1|//PREDICTED: uncharacterized protein LOC101257239 [Solanum lycopersicum]
Solyc02g094490.3.1	821	2609.49718755165	1132.91775803681	-1.20372871174352	0.0206951477030595	Down	0.000425162758997273	NA	NA	NA	K14822//rRNA-processing protein CGR1	gi|460371849|ref|XP_004231747.1|//PREDICTED: rRNA-processing protein CGR1 [Solanum lycopersicum]
Solyc09g009590.1.1	456	24.8718000743886	165.077527816687	2.73056090775819	0.00359390022614219	Up	4.50389874271666e-05	NA	GO:0046914//transition metal ion binding;GO:0003676//nucleic acid binding	NA	NA	gi|994310942|ref|NP_001307113.1|//A20/AN1 zinc finger protein [Solanum lycopersicum]
Solyc06g009370.3.1	3270	180.7914394155	428.56965273177	1.24520332866639	0.0326749353989924	Up	0.000768402551994968	NA	NA	NA	NA	gi|460389850|ref|XP_004240561.1|//PREDICTED: uncharacterized protein LOC101263710 [Solanum lycopersicum]
Solyc09g010470.3.1	1619	428.549414362323	1130.47278960152	1.39939279635899	0.0404530772327349	Up	0.00104611071819111	NA	NA	NA	NA	gi|460401916|ref|XP_004246461.1|//PREDICTED: UNC93-like protein 3 [Solanum lycopersicum]
Solyc06g051410.3.1	1470	86.7085352243672	250.171236880149	1.52867000861475	0.000985386018947885	Up	1.00477710477058e-05	NA	GO:0004640//phosphoribosylanthranilate isomerase activity	GO:0006520//cellular amino acid metabolic process;GO:0006568//tryptophan metabolic process	K01817//phosphoribosylanthranilate isomerase [EC:5.3.1.24]	gi|723706185|ref|XP_010322188.1|//PREDICTED: N-(5'-phosphoribosyl)anthranilate isomerase 1, chloroplastic isoform X1 [Solanum lycopersicum];gi|723706195|ref|XP_010322191.1|//PREDICTED: N-(5'-phosphoribosyl)anthranilate isomerase 1, chloroplastic isoform X2 [Solanum lycopersicum]
Solyc07g005370.3.1	1671	663.290271502974	280.463728230606	-1.24182616372347	0.0159536457538223	Down	0.000300740359057266	NA	NA	NA	NA	gi|460393958|ref|XP_004242574.1|//PREDICTED: S-norcoclaurine synthase-like [Solanum lycopersicum]
Solyc02g022880.1.1	1514	2.16269861223911	364.468300945341	7.39681690438709	3.88654950265674e-32	Up	2.77850925802303e-35	NA	NA	NA	NA	gi|697174643|ref|XP_009596253.1|//PREDICTED: uncharacterized protein LOC104092367 [Nicotiana tomentosiformis]
Solyc03g117675.1.1	1893	708.459180654088	2441.44190599879	1.78497681273787	1.04921413802287e-05	Up	6.35600241643832e-08	NA	NA	NA	NA	gi|460380280|ref|XP_004235885.1|//PREDICTED: uncharacterized protein LOC101254582 isoform X1 [Solanum lycopersicum];gi|723686171|ref|XP_010318696.1|//PREDICTED: uncharacterized protein LOC101254582 isoform X2 [Solanum lycopersicum]
Solyc04g007000.1.1	1119	211.941033555581	718.079484253179	1.76048061230044	0.0396995866896928	Up	0.00101426117930171	GO:0043231//intracellular membrane-bounded organelle	GO:0001071//nucleic acid binding transcription factor activity;GO:0003676//nucleic acid binding	GO:0006351//transcription, DNA-templated	K09287//RAV-like factor	gi|460382544|ref|XP_004236999.1|//PREDICTED: AP2/ERF and B3 domain-containing transcription factor RAV1 [Solanum lycopersicum]
Solyc12g088840.1.1	264	159.853494152514	508.079928373846	1.66830519222983	0.00165565698174263	Up	1.81906098757892e-05	NA	NA	NA	NA	gi|641865519|gb|KDO84204.1|//hypothetical protein CISIN_1g036018mg [Citrus sinensis]
Solyc04g081755.1.1	1704	146.914866585473	669.785325507193	2.18871837578252	0.000532004996093556	Up	4.9232896117236e-06	NA	NA	NA	K01188//beta-glucosidase [EC:3.2.1.21];K00679//phospholipid:diacylglycerol acyltransferase [EC:2.3.1.158];K10396//kinesin family member 5;K01206//alpha-L-fucosidase [EC:3.2.1.51];K10960//geranylgeranyl reductase [EC:1.3.1.83]	gi|970021019|ref|XP_015071763.1|//PREDICTED: GDSL esterase/lipase EXL3-like [Solanum pennellii];gi|723696123|ref|XP_010320438.1|//PREDICTED: GDSL esterase/lipase EXL3 isoform X1 [Solanum lycopersicum];gi|723696129|ref|XP_004238377.2|//PREDICTED: GDSL esterase/lipase EXL3-like [Solanum lycopersicum];gi|723696665|ref|XP_010320539.1|//PREDICTED: GDSL esterase/lipase EXL3-like [Solanum lycopersicum]
Solyc06g048540.3.1	1564	4128.7837089662	1850.16477753042	-1.15806307894127	0.000225582522019901	Down	1.79943163894416e-06	NA	GO:0032559//adenyl ribonucleotide binding;GO:0042626//ATPase activity, coupled to transmembrane movement of substances	GO:0051234//establishment of localization;GO:0009207//purine ribonucleoside triphosphate catabolic process	K09013//Fe-S cluster assembly ATP-binding protein	gi|460390441|ref|XP_004240842.1|//PREDICTED: ABC transporter I family member 6, chloroplastic [Solanum lycopersicum]
Solyc02g077750.3.1	1242	799.899334469903	1799.4507559183	1.16966626514619	0.00835442625679188	Up	0.000130768759559974	NA	NA	NA	K15697//RING finger protein 114 [EC:2.3.2.27]	gi|723674815|ref|XP_010316769.1|//PREDICTED: protein DEHYDRATION-INDUCED 19-like [Solanum lycopersicum]
Solyc11g005440.2.1	3420	161.854033738712	57.0600717918584	-1.50413985374831	0.0178254887637018	Down	0.000351452613620037	NA	NA	NA	K17573//meiosis arrest female protein 1	gi|460410050|ref|XP_004250444.1|//PREDICTED: uncharacterized protein LOC101261569 [Solanum lycopersicum]
Solyc08g079810.3.1	4115	447.822087916687	220.107178348725	-1.02471949138749	0.0356493579984091	Down	0.000875908897654406	NA	NA	NA	NA	gi|460400322|ref|XP_004245684.1|//PREDICTED: uncharacterized protein LOC101256314 [Solanum lycopersicum]
Solyc05g055160.3.1	2171	11059.3309265212	27469.2484188586	1.31255333038006	0.00372478398720081	Up	4.74272719836053e-05	GO:0044424//intracellular part	GO:0043169//cation binding;GO:0046872//metal ion binding;GO:0005515//protein binding;GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0031072//heat shock protein binding;GO:0051082//unfolded protein binding	GO:0044267//cellular protein metabolic process;GO:0006457//protein folding;GO:0006950//response to stress;GO:0009408//response to heat	K09503//DnaJ homolog subfamily A member 2	gi|460388160|ref|XP_004239737.1|//PREDICTED: dnaJ protein homolog [Solanum lycopersicum]
Solyc08g083500.2.1	1793	153.708234925618	9.62642588927568	-3.99705039735547	1.01291438279808e-06	Down	5.03084240242866e-09	NA	NA	NA	K20770;K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30];K05280//flavonoid 3'-monooxygenase [EC:1.14.13.21]	gi|460401254|ref|XP_004246141.1|//PREDICTED: flavonoid 3'-monooxygenase-like [Solanum lycopersicum]
Solyc12g035130.2.1	2848	10899.8393201229	23656.3980789221	1.117923558096	0.00038765406866515	Up	3.38396899312619e-06	NA	GO:0032559//adenyl ribonucleotide binding;GO:0042623//ATPase activity, coupled;GO:0003676//nucleic acid binding	NA	K12823//ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]	gi|460413678|ref|XP_004252209.1|//PREDICTED: ATP-dependent RNA helicase-like protein DB10 [Solanum lycopersicum]
Solyc02g079240.1.1	240	3.98545932374934	48.1729916799083	3.5954066128203	0.000229136079730168	Up	1.83639932959047e-06	NA	NA	NA	NA	gi|723674281|ref|XP_010316669.1|//PREDICTED: uncharacterized protein LOC104645811 [Solanum lycopersicum]
Solyc06g051620.3.1	2863	95.0488319514641	202.3452775556	1.09007837608125	0.0401472619994777	Up	0.00103174097699677	GO:0005622//intracellular	GO:0046872//metal ion binding;GO:0060089//molecular transducer activity;GO:0004435//phosphatidylinositol phospholipase C activity;GO:0004871//signal transducer activity;GO:0004629//phospholipase C activity	GO:0016042//lipid catabolic process;GO:0007165//signal transduction;GO:0044238//primary metabolic process;GO:0035556//intracellular signal transduction	K05857//phosphatidylinositol phospholipase C, delta [EC:3.1.4.11]	gi|350535487|ref|NP_001234197.1|//PI-phospholipase C PLC2 [Solanum lycopersicum];gi|970034313|ref|XP_015078474.1|//PREDICTED: uncharacterized protein LOC107022350 [Solanum pennellii];gi|723705640|ref|XP_010322097.1|//PREDICTED: PI-phospholipase C PLC2 isoform X1 [Solanum lycopersicum]
Solyc05g006810.3.1	2776	557.205278521351	160.937839034261	-1.79170535856253	0.0111992597333682	Down	0.0001887823441528	NA	GO:0016491//oxidoreductase activity;GO:0071949//FAD binding	GO:0055114//oxidation-reduction process	K03380//phenol 2-monooxygenase [EC:1.14.13.7]	gi|460387420|ref|XP_004239375.1|//PREDICTED: phenol 2-monooxygenase isoform X1 [Solanum lycopersicum]
Solyc05g041770.2.1	2195	58.0701890315749	2.45735186593413	-4.56262137457771	7.84052027790405e-09	Down	2.71410567621316e-11	NA	NA	NA	NA	gi|970015294|ref|XP_015068675.1|//PREDICTED: guanylate-binding protein 2-like [Solanum pennellii]
Solyc11g012040.2.1	1880	164.21601447795	508.574991670506	1.63086569488428	0.000151761286419081	Up	1.15918053742233e-06	NA	NA	NA	NA	gi|460409642|ref|XP_004250247.1|//PREDICTED: uncharacterized membrane protein At1g16860 [Solanum lycopersicum]
Solyc06g007580.1.1	900	54.396801056935	283.906664998057	2.38382300048534	1.41048211569924e-06	Up	7.32387146654986e-09	NA	NA	NA	NA	gi|460389594|ref|XP_004240436.1|//PREDICTED: uncharacterized protein LOC101250804 [Solanum lycopersicum]
Solyc02g084640.3.1	3896	1077.32444515638	2445.95962698654	1.18294779608681	0.0339835620908652	Up	0.00082019373640382	NA	NA	NA	K00128//aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]	gi|698459550|ref|XP_009781320.1|//PREDICTED: aldehyde dehydrogenase family 3 member F1-like isoform X2 [Nicotiana sylvestris];gi|723672446|ref|XP_010316396.1|//PREDICTED: aldehyde dehydrogenase family 3 member F1 [Solanum lycopersicum];gi|698459547|ref|XP_009781319.1|//PREDICTED: aldehyde dehydrogenase family 3 member F1-like isoform X1 [Nicotiana sylvestris]
BGI_novel_G000361	1639	2.55783294349338	53.9440088806764	4.39846879279289	2.40814415192496e-07	Up	1.06919896875925e-09	NA	NA	NA	K17604//zinc finger SWIM domain-containing protein 3;K17086//transmembrane 9 superfamily member 2/4;K14808//ATP-dependent RNA helicase DDX54/DBP10 [EC:3.6.4.13]	gi|970051250|ref|XP_015087207.1|//PREDICTED: uncharacterized protein LOC107030443 [Solanum pennellii]
Solyc03g113720.3.1	1213	158.428752069896	42.7521533786416	-1.88976518940551	0.026176421151587	Down	0.00057322787034743	NA	GO:0004871//signal transducer activity;GO:0016772//transferase activity, transferring phosphorus-containing groups	GO:0007165//signal transduction;GO:0006351//transcription, DNA-templated;GO:0006796//phosphate-containing compound metabolic process	K14492//two-component response regulator ARR-A family	gi|460380828|ref|XP_004236156.1|//PREDICTED: two-component response regulator ARR15-like [Solanum lycopersicum]
Solyc12g098900.2.1	1129	18.0313945905116	168.540471006132	3.22451217445508	6.27486534145136e-07	Up	3.04570729972241e-09	NA	NA	NA	NA	gi|460415216|ref|XP_004252956.1|//PREDICTED: late embryogenesis abundant protein D-29 [Solanum lycopersicum]
Solyc06g071000.3.1	2202	660.200108513893	1446.82069884897	1.13191086227757	0.0189542606556656	Up	0.000377986911521344	NA	GO:0016620//oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	GO:0055114//oxidation-reduction process	K00294//1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]	gi|460391926|ref|XP_004241569.1|//PREDICTED: probable aldehyde dehydrogenase [Solanum lycopersicum];gi|747051063|ref|XP_011071616.1|//PREDICTED: probable aldehyde dehydrogenase [Sesamum indicum]
Solyc03g031890.3.1	997	50.1133588738955	230.681323717068	2.20263406263357	0.0404530772327349	Up	0.00104605843972618	NA	NA	NA	NA	gi|460377424|ref|XP_004234493.1|//PREDICTED: uncharacterized protein LOC101258531 [Solanum lycopersicum]
Solyc04g080820.2.1	2072	3784.64460024873	1294.24524096331	-1.54804681595371	0.00832558622078865	Down	0.000130004074260725	NA	GO:0016645//oxidoreductase activity, acting on the CH-NH group of donors;GO:0050662//coenzyme binding	GO:0006725//cellular aromatic compound metabolic process	K00279//cytokinin dehydrogenase [EC:1.5.99.12]	gi|525314326|ref|NP_001266251.1|//cytokinin oxidase/dehydrogenase-like precursor [Solanum lycopersicum]
Solyc06g050320.3.1	1220	27.3156803884978	1108.17465628589	5.34231210954847	1.07080061449222e-30	Up	8.46100496833223e-34	NA	NA	NA	K11296//high mobility group protein B3	gi|723705928|ref|XP_010322145.1|//PREDICTED: high mobility group B protein 7 isoform X2 [Solanum lycopersicum];gi|460390523|ref|XP_004240880.1|//PREDICTED: high mobility group B protein 7 isoform X1 [Solanum lycopersicum]
Solyc03g115220.3.1	2291	2518.54104847626	386.122730128455	-2.70545685504857	1.80188907678617e-06	Down	9.69523038644023e-09	GO:0031224//intrinsic component of membrane;GO:0043231//intracellular membrane-bounded organelle;GO:0009505//plant-type cell wall;GO:0031090//organelle membrane;GO:0046658//anchored component of plasma membrane	GO:0016709//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen;GO:0001872//(1->3)-beta-D-glucan binding;GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0005506//iron ion binding	GO:0009699//phenylpropanoid biosynthetic process;GO:0052543//callose deposition in cell wall;GO:0009408//response to heat	K05280//flavonoid 3'-monooxygenase [EC:1.14.13.21];K19891//glucan endo-1,3-beta-glucosidase 1/2/3 [EC:3.2.1.39]	gi|726965361|ref|NP_001289844.1|//flavonoid 3'-monooxygenase [Solanum lycopersicum];gi|460380558|ref|XP_004236022.1|//PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Solanum lycopersicum]
Solyc03g062740.3.1	6396	118.706604952693	24.761020973599	-2.26125750251257	6.23444361076421e-05	Down	4.36319566392799e-07	NA	NA	NA	K12621//U6 snRNA-associated Sm-like protein LSm2	gi|970013142|ref|XP_015067530.1|//PREDICTED: NAC transcription factor 56-like [Solanum pennellii]
Solyc08g077140.1.1	813	2093.72515616409	857.17848162969	-1.28840453318494	3.23014697356961e-05	Down	2.17555144775166e-07	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial;K17710//pentatricopeptide repeat domain-containing protein 1	gi|460400717|ref|XP_004245879.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g46580, chloroplastic [Solanum lycopersicum]
Solyc01g103970.3.1	1701	189.433519235498	413.143272777278	1.12495054604404	0.02374356127339	Up	0.000507444136030611	NA	NA	NA	K15707//RING finger protein 170 [EC:2.3.2.27]	gi|460369252|ref|XP_004230477.1|//PREDICTED: E3 ubiquitin-protein ligase RNF170-like isoform X1 [Solanum lycopersicum];gi|460369254|ref|XP_004230478.1|//PREDICTED: E3 ubiquitin-protein ligase RNF170-like isoform X2 [Solanum lycopersicum]
BGI_novel_G000445	5340	1.78394714353537	35.1938988760056	4.30218057315067	3.34121434427024e-07	Up	1.54633466661113e-09	NA	NA	NA	NA	gi|970034191|ref|XP_015078408.1|//PREDICTED: uncharacterized protein LOC107022255 [Solanum pennellii]
Solyc02g005530.2.1	1522	2.43251228318946	30.1708346241859	3.63263561155491	0.000147563444835697	Up	1.12156435477333e-06	NA	NA	NA	K07466//replication factor A1;K15255//ATP-dependent DNA helicase PIF1 [EC:3.6.4.12]	gi|723667511|ref|XP_010315581.1|//PREDICTED: uncharacterized protein LOC104645518 [Solanum lycopersicum];gi|723667309|ref|XP_010315541.1|//PREDICTED: uncharacterized protein LOC101256635 [Solanum lycopersicum]
Solyc12g027540.2.1	1901	10.9400358242314	60.7994103422478	2.47443986949923	0.000902362090257168	Up	9.00708281549253e-06	NA	NA	NA	K06228//fused [EC:2.7.11.1];K20093//DNA excision repair protein ERCC-6-like [EC:3.6.4.12];K09422//myb proto-oncogene protein, plant;K05387//glutamate receptor, ionotropic, plant;K05658//ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:3.6.3.44]	gi|147805926|emb|CAN69998.1|//hypothetical protein VITISV_006839 [Vitis vinifera]
Solyc03g059435.1.1	575	1.6217149491104	13.3379736831016	3.03994734502984	0.00441019137405743	Up	5.88912972568268e-05	NA	NA	NA	K12471//epsin;K12448//UDP-arabinose 4-epimerase [EC:5.1.3.5];K04460//serine/threonine-protein phosphatase 5 [EC:3.1.3.16]	gi|970022858|ref|XP_015072759.1|//PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Solanum pennellii];gi|723700127|ref|XP_010321114.1|//PREDICTED: uncharacterized protein LOC104647420 [Solanum lycopersicum]
Solyc03g025480.3.1	819	249.83791194124	23.4466336441297	-3.41353970952981	3.4058638678247e-11	Down	9.99576256501212e-14	NA	NA	NA	NA	gi|734403254|gb|KHN32435.1|//Autophagy-related protein 3 [Glycine soja]
Solyc09g010160.2.1	1101	20.7995718936773	165.027992859567	2.98808502268088	4.50198820552113e-06	Up	2.62560925558105e-08	NA	NA	NA	K12581//CCR4-NOT transcription complex subunit 7/8	gi|723727673|ref|XP_004246880.2|//PREDICTED: NAC domain-containing protein 90-like [Solanum lycopersicum];gi|970051868|ref|XP_015087529.1|//PREDICTED: NAC domain-containing protein 90-like [Solanum pennellii]
Solyc05g050770.3.1	1700	782.589256336906	321.397683940444	-1.28389577185959	0.00636444855640083	Down	9.24362096087113e-05	NA	NA	NA	K16296//serine carboxypeptidase-like clade I [EC:3.4.16.-]	gi|723702441|ref|XP_010321497.1|//PREDICTED: serine carboxypeptidase-like 12 [Solanum lycopersicum]
Solyc07g008560.3.1	2419	139.390413206855	26.3372258323132	-2.40395604508272	1.10413760574258e-05	Down	6.73026647591144e-08	NA	NA	NA	K14407//cleavage stimulation factor subunit 2	gi|460394428|ref|XP_004242805.1|//PREDICTED: probable inactive purple acid phosphatase 27 [Solanum lycopersicum]
Solyc09g092580.3.1	3808	933.99508752114	140.651167156492	-2.73129343737158	0.000142264709419885	Down	1.0652322374443e-06	NA	NA	NA	K20617	gi|460404867|ref|XP_004247901.1|//PREDICTED: cytochrome P450 83B1-like [Solanum lycopersicum]
Solyc12g098370.2.1	1249	207.102252003919	448.353483299779	1.11429336488354	0.0098302801960325	Up	0.000158678188061028	NA	NA	NA	K12741//heterogeneous nuclear ribonucleoprotein A1/A3;K06236//collagen, type I, alpha;K01940//argininosuccinate synthase [EC:6.3.4.5];K14491//two-component response regulator ARR-B family;K14317//nuclear pore complex protein Nup214	gi|460415294|ref|XP_004252994.1|//PREDICTED: myb family transcription factor APL-like isoform X1 [Solanum lycopersicum];gi|460415296|ref|XP_004252995.1|//PREDICTED: myb family transcription factor APL-like isoform X2 [Solanum lycopersicum]
Solyc10g011920.2.1	2716	65.5343718086504	6.44416918748141	-3.34618550068355	0.000815739508495074	Down	8.04168082273054e-06	GO:0044424//intracellular part	GO:0016840//carbon-nitrogen lyase activity	GO:0006558//L-phenylalanine metabolic process	K10775//phenylalanine ammonia-lyase [EC:4.3.1.24]	gi|976902533|gb|KVH90475.1|//Aromatic amino acid lyase [Cynara cardunculus var. scolymus];gi|193290718|gb|ACF17667.1|//putative phenylalanine ammonia-lyase [Capsicum annuum]
Solyc01g079120.3.1	252	1.66191779656864	12.9961753254327	2.96716618267919	0.00636444855640083	Up	9.2427582070596e-05	NA	NA	NA	NA	NA
Solyc00g019980.2.1	869	188.129751283991	39.4073238101752	-2.25519233502384	0.0394199222530642	Down	0.00100266119564674	GO:0030529//intracellular ribonucleoprotein complex;GO:0009536//plastid	GO:0005198//structural molecule activity;GO:0003824//catalytic activity;GO:0003676//nucleic acid binding	GO:0010467//gene expression	K05577//NAD(P)H-quinone oxidoreductase subunit 5 [EC:1.6.5.3]	gi|323435148|ref|YP_004222366.1|//hypothetical protein BevumaM_p133 (mitochondrion) [Beta vulgaris subsp. maritima]
Solyc04g078640.2.1	2132	400.078427798178	1440.56437081975	1.84827938209163	0.00110464648015726	Up	1.13885365377239e-05	NA	NA	GO:0006351//transcription, DNA-templated	K09286//EREBP-like factor	gi|460384883|ref|XP_004238136.1|//PREDICTED: ethylene-responsive transcription factor ERF010-like [Solanum lycopersicum]
Solyc03g093080.3.1	1077	153.129335606694	17.8232776931838	-3.10291611486914	0.00031888703604698	Down	2.68768845522533e-06	GO:0030312//external encapsulating structure;GO:0005576//extracellular region	GO:0016758//transferase activity, transferring hexosyl groups;GO:0016798//hydrolase activity, acting on glycosyl bonds	GO:0044042//glucan metabolic process	K08235//xyloglucan:xyloglucosyl transferase [EC:2.4.1.207]	gi|460378800|ref|XP_004235156.1|//PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 23 [Solanum lycopersicum]
Solyc06g051820.3.1	1869	85.1997201063204	217.130741331064	1.34964340081154	0.0128998876824937	Up	0.000228658555190938	GO:0016459//myosin complex;GO:0015629//actin cytoskeleton	GO:0003774//motor activity;GO:0017111//nucleoside-triphosphatase activity	NA	NA	gi|970034315|ref|XP_015078475.1|//PREDICTED: myosin heavy chain IB-like [Solanum pennellii]
BGI_novel_G000289	1309	291.002370601789	4.00978696264119	-6.18136150635593	1.20880065183169e-24	Down	1.27352290519198e-27	NA	NA	NA	K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6];K03549//KUP system potassium uptake protein;K12447//UDP-sugar pyrophosphorylase [EC:2.7.7.64];K05658//ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:3.6.3.44]	gi|147789747|emb|CAN67403.1|//hypothetical protein VITISV_025614 [Vitis vinifera]
Solyc08g023660.3.1	756	7.43386955896284	48.4750726073684	2.70505778047156	0.000330641603721956	Up	2.81164173688385e-06	NA	NA	GO:0006950//response to stress	NA	gi|460398654|ref|XP_004244869.1|//PREDICTED: kirola-like [Solanum lycopersicum]
Solyc09g025260.3.1	3567	1026.39671325622	385.386622353477	-1.41321005733873	0.00050829493600903	Down	4.66659007360512e-06	NA	NA	NA	NA	gi|460402900|ref|XP_004246948.1|//PREDICTED: rho-N domain-containing protein 1, chloroplastic [Solanum lycopersicum]
Solyc03g117540.3.1	4865	400.850188335867	1120.28767061705	1.48273418195831	0.00425307856603888	Up	5.58499612276618e-05	NA	NA	NA	K05674//ATP-binding cassette, subfamily C (CFTR/MRP), member 10	gi|723686209|ref|XP_010318703.1|//PREDICTED: ABC transporter C family member 13 isoform X2 [Solanum lycopersicum];gi|971540192|ref|XP_015161665.1|//PREDICTED: ABC transporter C family member 13 isoform X2 [Solanum tuberosum];gi|460381416|ref|XP_004236445.1|//PREDICTED: ABC transporter C family member 13 isoform X1 [Solanum lycopersicum];gi|970017678|ref|XP_015069981.1|//PREDICTED: ABC transporter C family member 13 isoform X7 [Solanum pennellii]
Solyc07g064280.3.1	3723	977.815521076549	425.558183639368	-1.2002059105842	0.00396068678950603	Down	5.14142658080137e-05	NA	NA	NA	K01696//tryptophan synthase beta chain [EC:4.2.1.20]	gi|460397172|ref|XP_004244142.1|//PREDICTED: tryptophan synthase beta chain 1-like [Solanum lycopersicum]
Solyc03g116100.3.1	1642	393.373396227231	1273.19688470987	1.69448423524891	0.00673949428143306	Up	0.000102122190248996	NA	NA	NA	K09422//myb proto-oncogene protein, plant	gi|460380535|ref|XP_004236011.1|//PREDICTED: myb-related protein 306 [Solanum lycopersicum]
Solyc01g107430.2.1	1100	203.935590321538	693.420032225306	1.76561594238596	0.0155052341555926	Up	0.00028937036314008	NA	GO:0005488//binding	NA	K10773//endonuclease III [EC:4.2.99.18]	gi|723665087|ref|XP_010315203.1|//PREDICTED: zinc finger protein 4-like [Solanum lycopersicum]
Solyc11g065545.1.1	1278	753.104225369995	1826.96601371122	1.27852835168933	0.00673499398535516	Up	0.000100996436255495	NA	NA	NA	NA	gi|723744891|ref|XP_010313270.1|//PREDICTED: uncharacterized protein LOC101245915 [Solanum lycopersicum]
Solyc01g087810.2.1	2539	40.8660912985178	187.375415245394	2.19695550911729	0.00673499398535516	Up	0.000101278757527619	NA	GO:0004175//endopeptidase activity;GO:0005515//protein binding	GO:0044092//negative regulation of molecular function;GO:0019538//protein metabolic process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13199//plasminogen activator inhibitor 1 RNA-binding protein;K12663//Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase [EC:5.3.3.-];K01183//chitinase [EC:3.2.1.14]	gi|460367609|ref|XP_004229665.1|//PREDICTED: subtilisin-like protease [Solanum lycopersicum]
Solyc04g077745.1.1	2316	245.66930343559	59.7942932007302	-2.0386378986086	7.52853607072719e-06	Down	4.47570718732323e-08	GO:0043231//intracellular membrane-bounded organelle;GO:0019866//organelle inner membrane	GO:0016491//oxidoreductase activity	GO:0006091//generation of precursor metabolites and energy	K03937//NADH dehydrogenase (ubiquinone) Fe-S protein 4;K03549//KUP system potassium uptake protein;K12447//UDP-sugar pyrophosphorylase [EC:2.7.7.64];K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|697102004|ref|XP_009598759.1|//PREDICTED: uncharacterized protein LOC104094510 [Nicotiana tomentosiformis];gi|970066772|ref|XP_015060425.1|//PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Solanum pennellii];gi|698504029|ref|XP_009797569.1|//PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Nicotiana sylvestris];gi|970028100|ref|XP_015075346.1|//PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Solanum pennellii]
Solyc03g025830.3.1	4757	459.558696347217	195.240453039317	-1.23499713453284	0.00106743444007974	Down	1.09245651390936e-05	NA	NA	NA	K20478//golgin subfamily B member 1	gi|723679608|ref|XP_010317600.1|//PREDICTED: early endosome antigen 1 isoform X1 [Solanum lycopersicum]
Solyc02g065170.3.1	2560	2306.80115025099	894.780204760373	-1.36628840179293	0.0292127315982214	Down	0.000662801563522126	NA	NA	NA	K19791//iron transport multicopper oxidase	gi|460375269|ref|XP_004233429.1|//PREDICTED: L-ascorbate oxidase homolog [Solanum lycopersicum]
Solyc12g008660.1.1	1218	63.9286593264431	268.892038344523	2.0724922949835	0.00382645580255976	Up	4.93838409255371e-05	NA	NA	NA	K15172//transcription elongation factor SPT5;K07560//D-tyrosyl-tRNA(Tyr) deacylase [EC:3.1.-.-]	gi|460412528|ref|XP_004251650.1|//PREDICTED: zinc finger CCCH domain-containing protein 20 [Solanum lycopersicum]
Solyc02g065780.1.1	291	373.278518796842	940.47592680587	1.3331385281133	0.00984062611276554	Up	0.000159215458046024	NA	NA	NA	NA	gi|723677112|ref|XP_010317137.1|//PREDICTED: protein RALF-like 27 [Solanum lycopersicum]
Solyc12g095810.2.1	2477	34.110912157076	86.6174189847504	1.34442384934	0.0404530772327349	Up	0.00104598851115991	NA	NA	NA	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|723753667|ref|XP_004253108.2|//PREDICTED: protein NRT1/ PTR FAMILY 1.2-like isoform X1 [Solanum lycopersicum]
Solyc09g089580.3.1	1541	205.989087107707	766.133523927865	1.89502794273708	0.00343562222364542	Up	4.22714552858506e-05	NA	GO:0043169//cation binding;GO:0046872//metal ion binding;GO:0009815//1-aminocyclopropane-1-carboxylate oxidase activity;GO:0019842//vitamin binding;GO:0003824//catalytic activity;GO:0051213//dioxygenase activity;GO:0031418//L-ascorbic acid binding	GO:0009693//ethylene biosynthetic process;GO:0009835//fruit ripening;GO:0003006//developmental process involved in reproduction;GO:0009692//ethylene metabolic process;GO:0055114//oxidation-reduction process	K06892//feruloyl-CoA ortho-hydroxylase [EC:1.14.11.-];K13229//2,4-dihydroxy-1,4-benzoxazin-3-one-glucoside dioxygenase [EC:1.14.20.2]	gi|822606560|ref|NP_001296142.1|//1-aminocyclopropane-1-carboxylate oxidase homolog isoform 1 [Solanum lycopersicum]
Solyc03g116245.1.1	2748	153.699522485904	7.59899643838333	-4.33815997105466	1.85855544206873e-11	Down	5.17489192584137e-14	NA	NA	NA	K01363//cathepsin B [EC:3.4.22.1];K19986//exocyst complex component 8	gi|565393888|ref|XP_006362602.1|//PREDICTED: cathepsin B-like [Solanum tuberosum];gi|460374859|ref|XP_004233226.1|//PREDICTED: exocyst complex component EXO84C [Solanum lycopersicum]
Solyc09g007910.3.1	2283	6134.76965177701	1547.41659932789	-1.98714751960632	0.00822881228596849	Down	0.000128183327177294	GO:0044424//intracellular part	GO:0016840//carbon-nitrogen lyase activity	GO:0006558//L-phenylalanine metabolic process	K10775//phenylalanine ammonia-lyase [EC:4.3.1.24]	gi|987996569|ref|NP_001306969.1|//phenylalanine ammonia-lyase [Solanum lycopersicum]
Solyc01g110110.3.1	1334	271.943802141734	45.8558781686001	-2.56812995895286	2.79761749766595e-10	Down	8.7369624978844e-13	NA	GO:0004175//endopeptidase activity	GO:0019538//protein metabolic process	K01373//cathepsin F [EC:3.4.22.41]	gi|460370172|ref|XP_004230928.1|//PREDICTED: cysteine proteinase RD19a [Solanum lycopersicum]
BGI_novel_G000029	2347	2.13316204086689	193.466116617108	6.50294354576073	4.08015409406476e-22	Up	5.21974787215269e-25	NA	NA	NA	NA	NA
Solyc05g012510.3.1	3171	2673.19506870744	1271.52528943554	-1.07200496178245	0.0449735122777507	Down	0.00123321799170968	GO:0009536//plastid	GO:0016758//transferase activity, transferring hexosyl groups;GO:0048037//cofactor binding	GO:0044238//primary metabolic process	K00688//starch phosphorylase [EC:2.4.1.1]	gi|460386770|ref|XP_004239069.1|//PREDICTED: alpha-1,4 glucan phosphorylase L-2 isozyme, chloroplastic/amyloplastic [Solanum lycopersicum]
Solyc02g030655.1.1	1290	3.38800116253891	24.3301508500547	2.84423899037752	0.0117268261369664	Up	0.000202087758992009	NA	NA	NA	K05747//Wiskott-Aldrich syndrome protein	gi|460371696|ref|XP_004231671.1|//PREDICTED: ninja-family protein AFP3-like isoform X1 [Solanum lycopersicum]
Solyc04g015490.3.1	2767	5037.90017099112	2384.46436638814	-1.07915731133722	0.0205174121014206	Down	0.000420056525371097	GO:0009532//plastid stroma	GO:0051003//ligase activity, forming nitrogen-metal bonds, forming coordination complexes;GO:0032559//adenyl ribonucleotide binding;GO:0016462//pyrophosphatase activity	GO:0006779//porphyrin-containing compound biosynthetic process	K03404//magnesium chelatase subunit D [EC:6.6.1.1]	gi|460381795|ref|XP_004236627.1|//PREDICTED: magnesium-chelatase subunit ChlD, chloroplastic [Solanum lycopersicum]
Solyc12g100060.1.1	483	848.273144248816	2054.14698200976	1.2759386226364	0.00652104197015713	Up	9.54466390635182e-05	NA	GO:0046914//transition metal ion binding	NA	NA	gi|460415039|ref|XP_004252868.1|//PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 5-like [Solanum lycopersicum]
Solyc01g080620.3.1	3077	641.824449277793	273.433278742953	-1.23098990812159	0.00395143714076079	Down	5.11455159130719e-05	NA	NA	NA	K10485//BTB/POZ domain-containing protein 13 (germ cell-less protein-like 1)	gi|460367252|ref|XP_004229489.1|//PREDICTED: uncharacterized protein LOC101246086 [Solanum lycopersicum]
Solyc03g121240.1.1	1388	745.41214569444	1975.42432289392	1.40605234720436	0.0294846786158547	Up	0.000670081118409761	NA	GO:0046983//protein dimerization activity	NA	K16189//phytochrome-interacting factor 4;K10863//aprataxin [EC:3.-.-.-];K12126//phytochrome-interacting factor 3	gi|460379756|ref|XP_004235627.1|//PREDICTED: transcription factor bHLH87 [Solanum lycopersicum]
Solyc01g066290.2.1	606	189.38471415642	990.138221316892	2.38631004560258	8.78355527418145e-07	Up	4.329479402934e-09	NA	NA	NA	NA	NA
Solyc03g096670.3.1	1682	207.81584683876	834.843911009314	2.00620081513009	1.51799316412701e-05	Up	9.53850541480265e-08	NA	GO:0004721//phosphoprotein phosphatase activity	NA	K14497//protein phosphatase 2C [EC:3.1.3.16]	gi|910749435|ref|NP_001234692.2|//protein phosphatase 2C AHG3 homolog [Solanum lycopersicum]
Solyc01g094280.3.1	1749	1220.13613670898	468.769556825752	-1.38009134012909	0.00796250563332799	Down	0.000123435764794037	NA	GO:0004486//methylenetetrahydrofolate dehydrogenase [NAD(P)+] activity;GO:0019238//cyclohydrolase activity	GO:0006760//folic acid-containing compound metabolic process	K15710//E3 ubiquitin-protein ligase SHPRH [EC:3.6.4.- 2.3.2.27];K00288//methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase / formyltetrahydrofolate synthetase [EC:1.5.1.5 3.5.4.9 6.3.4.3]	gi|460368122|ref|XP_004229918.1|//PREDICTED: bifunctional protein FolD 4, chloroplastic [Solanum lycopersicum]
Solyc05g008120.3.1	3562	29.7039473381414	99.9183224730996	1.75009459320175	0.00267224611139822	Up	3.19740476135242e-05	NA	NA	NA	K09510//DnaJ homolog subfamily B member 4;K09512//DnaJ homolog subfamily B member 6;K09514//DnaJ homolog subfamily B member 8	gi|460386310|ref|XP_004238842.1|//PREDICTED: uncharacterized protein LOC101254087 [Solanum lycopersicum]
Solyc04g082910.1.1	264	2.61680448347626	390.828769484846	7.22258672354684	1.21532365143541e-28	Up	1.09748156806449e-31	NA	NA	NA	NA	gi|970021296|ref|XP_015071907.1|//PREDICTED: calvin cycle protein CP12-3, chloroplastic [Solanum pennellii]
BGI_novel_G000009	2702	596.27797806171	133.969656870418	-2.15407877764975	0.0339496331160689	Down	0.000815964197837242	GO:0005739//mitochondrion	NA	NA	NA	gi|763742283|gb|KJB09782.1|//hypothetical protein B456_001G165500 [Gossypium raimondii]
Solyc01g007010.2.1	1360	515.292006485833	129.501559132951	-1.99242074539494	0.0198156369046616	Down	0.00039814689796024	GO:0043234//protein complex	GO:0019787//ubiquitin-like protein transferase activity	GO:0032446//protein modification by small protein conjugation	K10260//F-box and WD-40 domain protein 7;K08332//vacuolar protein 8	gi|460365604|ref|XP_004228691.1|//PREDICTED: E3 ubiquitin-protein ligase PUB22-like [Solanum lycopersicum]
Solyc01g106630.2.1	893	2.43685068672868	114.900596378917	5.55922462048267	7.57264243129696e-14	Up	1.73808627124624e-16	NA	NA	GO:0006950//response to stress	K13449//pathogenesis-related protein 1	gi|350538759|ref|NP_001234358.1|//PR1 protein precursor [Solanum lycopersicum]
Solyc03g025740.3.1	1555	354.802142558459	124.489634553597	-1.51098909831541	0.0205174121014206	Down	0.000419594929364722	NA	NA	NA	K05765//cofilin;K17578//zinc finger CCHC domain-containing protein 9	gi|723679637|ref|XP_010317605.1|//PREDICTED: uncharacterized protein C683.02c [Solanum lycopersicum];gi|747060138|ref|XP_011076485.1|//PREDICTED: uncharacterized protein C683.02c [Sesamum indicum]
Solyc09g015475.1.1	665	40.8627223285043	3.19090882879665	-3.67874602813652	0.000125297049324233	Down	9.28754890201074e-07	NA	NA	NA	NA	gi|460401684|ref|XP_004246347.1|//PREDICTED: uncharacterized protein LOC101255724 [Solanum lycopersicum]
Solyc03g098640.3.1	1413	428.387043809828	122.290721450926	-1.80859990111079	0.00306639749817063	Down	3.73032788493166e-05	GO:0031224//intrinsic component of membrane	NA	NA	K13347//peroxisomal membrane protein 2	gi|460379311|ref|XP_004235407.1|//PREDICTED: protein sym-1 [Solanum lycopersicum];gi|970013378|ref|XP_015067657.1|//PREDICTED: protein sym-1 [Solanum pennellii]
Solyc03g006100.3.1	6199	1868.99867907826	209.070721454499	-3.16020260522498	1.06073905497809e-12	Down	2.59427469517161e-15	NA	NA	NA	K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|723678782|ref|XP_010317427.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Solanum lycopersicum]
Solyc02g082060.2.1	642	477.633069138343	2302.24014298052	2.26906369572001	0.000983328461527519	Up	9.95279211915952e-06	NA	NA	NA	K08825//dual specificity tyrosine-phosphorylation-regulated kinase 1 [EC:2.7.12.1]	gi|460373616|ref|XP_004232611.1|//PREDICTED: deSI-like protein At4g17486 [Solanum lycopersicum]
Solyc12g042250.2.1	1097	58.7095191862779	2.87869248305812	-4.35010885544752	4.69958113622571e-07	Down	2.24572677239969e-09	GO:0031224//intrinsic component of membrane	NA	GO:0015833//peptide transport	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|971549174|ref|XP_015163861.1|//PREDICTED: protein NRT1/ PTR FAMILY 8.3-like [Solanum tuberosum]
Solyc09g059170.2.1	1410	1411.31744609376	307.744062111943	-2.19723960281001	0.00672196672785439	Down	9.94425133867966e-05	NA	GO:0035251//UDP-glucosyltransferase activity	NA	K17193//anthocyanidin 3-O-glucoside 2'''-O-xylosyltransferase [EC:2.4.2.51]	gi|460403139|ref|XP_004247056.1|//PREDICTED: anthocyanidin 3-O-glucosyltransferase-like [Solanum lycopersicum]
Solyc01g100080.3.1	1517	351.902246775499	141.089412188163	-1.31856499779774	0.0209717447130762	Down	0.000432423377460426	NA	GO:0043566//structure-specific DNA binding	GO:0006259//DNA metabolic process	K03111//single-strand DNA-binding protein	gi|969997402|ref|XP_015067714.1|//PREDICTED: single-stranded DNA-binding protein, mitochondrial isoform X1 [Solanum pennellii]
Solyc00g282510.2.1	1749	69.6212413939534	7.29514310751959	-3.25451935389762	0.0018071636011569	Down	1.99911991097614e-05	GO:0044424//intracellular part	GO:0016840//carbon-nitrogen lyase activity	GO:0006558//L-phenylalanine metabolic process	K10775//phenylalanine ammonia-lyase [EC:4.3.1.24]	gi|460416376|ref|XP_004253518.1|//PREDICTED: phenylalanine ammonia-lyase-like, partial [Solanum lycopersicum]
Solyc03g113710.3.1	1998	2.6777550966703	31.1622824216307	3.54070497954522	6.35177571877826e-05	Up	4.46921044290753e-07	NA	NA	NA	K18875//enhanced disease susceptibility 1 protein;K05740;K19984//exocyst complex component 5;K02184//formin 2	gi|460381560|ref|XP_004236516.1|//PREDICTED: formin-like protein 4 [Solanum lycopersicum]
Solyc11g007000.2.1	1864	215.606101553196	67.9433604921544	-1.66599352519337	0.00466720849149171	Down	6.38547018494046e-05	GO:0016020//membrane	NA	GO:0065003//macromolecular complex assembly	K02259//cytochrome c oxidase assembly protein subunit 15	gi|460409080|ref|XP_004249968.1|//PREDICTED: cytochrome c oxidase assembly protein COX15 [Solanum lycopersicum]
Solyc09g072650.3.1	3181	309.144652893336	694.457662154706	1.16760469019465	0.0438428912578669	Up	0.00117620429193886	NA	NA	NA	K09667//protein O-GlcNAc transferase [EC:2.4.1.255];K12178//COP9 signalosome complex subunit 4;K14442//ATP-dependent RNA helicase DHX36 [EC:3.6.4.13]	gi|460404083|ref|XP_004247514.1|//PREDICTED: tetratricopeptide repeat protein 7A isoform X2 [Solanum lycopersicum];gi|698460759|ref|XP_009781614.1|//PREDICTED: tetratricopeptide repeat protein 7A-like [Nicotiana sylvestris]
Solyc01g101060.3.1	1787	10917.0402386673	22151.2602040179	1.02080700266882	0.0429704347240481	Up	0.00113204486695653	GO:0044424//intracellular part;GO:0005829//cytosol	GO:0016765//transferase activity, transferring alkyl or aryl (other than methyl) groups;GO:0046872//metal ion binding;GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0004478//methionine adenosyltransferase activity	GO:0006730//one-carbon metabolic process;GO:0044237//cellular metabolic process;GO:0006556//S-adenosylmethionine biosynthetic process	K00789//S-adenosylmethionine synthetase [EC:2.5.1.6]	gi|350534978|ref|NP_001234425.1|//S-adenosylmethionine synthase 1 [Solanum lycopersicum]
Solyc06g054010.3.1	2703	235.238851159598	717.508091832276	1.6088687522316	0.00131153151287992	Up	1.3916239102688e-05	NA	GO:0016791//phosphatase activity	NA	K20279//synaptojanin [EC:3.1.3.36]	gi|350537175|ref|NP_001233772.1|//inositol-1,4,5-triphosphate-5-phosphatase [Solanum lycopersicum]
BGI_novel_G000474	1029	843.208951117793	176.310885070073	-2.25776863562114	0.025645515858835	Down	0.000554847109110515	NA	NA	NA	NA	gi|723746607|ref|XP_010313549.1|//PREDICTED: zinc finger protein ZAT11-like [Solanum lycopersicum]
BGI_novel_G000227	3915	171.974835390894	14.1743331500294	-3.60084470632768	5.61410424310012e-07	Down	2.70386177189606e-09	NA	NA	NA	NA	NA
Solyc03g006030.3.1	4217	1170.5856532661	3539.53190779242	1.59632807876728	0.00401399575016033	Up	5.24083427514631e-05	NA	NA	NA	K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|723678757|ref|XP_010317425.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Solanum lycopersicum];gi|970015008|ref|XP_015068512.1|//PREDICTED: putative receptor-like protein kinase At3g47110 isoform X2 [Solanum pennellii]
Solyc09g082780.3.1	1093	1249.97082705207	2597.71900785401	1.05535096027438	0.0461838703776888	Up	0.00129429724618031	NA	NA	NA	K07904//Ras-related protein Rab-11A;K01953//asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4];K13783//MFS transporter, OPA family, solute carrier family 37 (glycerol-3-phosphate transporter), member 1/2	gi|460404279|ref|XP_004247611.1|//PREDICTED: stem-specific protein TSJT1 [Solanum lycopersicum]
Solyc07g042610.2.1	4628	2.59332371446968	67.3986816208281	4.69984616273204	1.05122098653478e-08	Up	3.71805594063549e-11	NA	NA	NA	K13963//serpin B;K17604//zinc finger SWIM domain-containing protein 3	gi|295841810|dbj|BAJ06702.1|//unnamed protein product [Solanum lycopersicum]
Solyc01g103920.3.1	423	121.817553087527	19.7175076128627	-2.6271729260353	0.00775243507920559	Down	0.000119304133175117	GO:0009536//plastid	GO:0043169//cation binding;GO:0051536//iron-sulfur cluster binding	GO:0006091//generation of precursor metabolites and energy;GO:0051234//establishment of localization	K02639//ferredoxin	gi|460369244|ref|XP_004230473.1|//PREDICTED: ferredoxin-like [Solanum lycopersicum]
Solyc10g017960.2.1	1118	16.9618568820666	145.054154845784	3.09622559860011	0.000216118137475853	Up	1.71580415424634e-06	NA	NA	NA	NA	gi|460406230|ref|XP_004248570.1|//PREDICTED: F-box protein PP2-A13-like [Solanum lycopersicum]
Solyc01g099840.3.1	907	2084.90228176763	6017.55806270483	1.52919839023535	0.0167746824533107	Up	0.000321898184565168	NA	NA	NA	NA	gi|460368807|ref|XP_004230256.1|//PREDICTED: auxin-repressed 12.5 kDa protein [Solanum lycopersicum]
Solyc08g006280.2.1	3305	775.716058793083	4.13726667171892	-7.55070690730973	1.95451872003207e-48	Down	2.20625208266403e-52	NA	NA	NA	K19519//transforming growth factor-beta-induced protein	gi|723719589|ref|XP_010324533.1|//PREDICTED: uncharacterized protein LOC104648601 [Solanum lycopersicum]
Solyc04g081700.3.1	704	73.3846737758123	453.584917973148	2.62782197440007	0.00372478398720081	Up	4.77913737304992e-05	NA	NA	NA	NA	NA
Solyc09g082690.3.1	8961	26666.876712741	1465.15651703303	-4.1859221673976	7.72987669021195e-12	Down	2.03593847430047e-14	NA	NA	NA	NA	gi|460404259|ref|XP_004247601.1|//PREDICTED: dymeclin [Solanum lycopersicum]
Solyc06g005880.3.1	3030	8.80413164145976	1.5638749845312	-2.49305552805188	0.0430615619390268	Down	0.00113963871417064	NA	NA	NA	K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|723704744|ref|XP_010321910.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Solanum lycopersicum]
Solyc06g018110.3.1	1393	536.218579633187	121.086242070931	-2.14678625463346	0.0154459243612765	Down	0.00028768230269902	NA	GO:0046914//transition metal ion binding	NA	K11294//nucleolin	gi|970414551|ref|NP_001305061.1|//RNA binding protein [Solanum lycopersicum]
Solyc12g057080.2.1	1678	1148.64617231766	366.579917931374	-1.64773480115934	0.00152225891306979	Down	1.64385862983418e-05	NA	GO:0016757//transferase activity, transferring glycosyl groups	NA	K00699//glucuronosyltransferase [EC:2.4.1.17];K13030//cyanohydrin beta-glucosyltransferase [EC:2.4.1.85]	gi|460414343|ref|XP_004252531.1|//PREDICTED: 7-deoxyloganetin glucosyltransferase-like [Solanum lycopersicum];gi|565389029|ref|XP_006360268.1|//PREDICTED: 7-deoxyloganetin glucosyltransferase-like [Solanum tuberosum]
BGI_novel_G000020	4180	34.9496311974686	199.960529436863	2.51636611507593	1.49646686343298e-08	Up	5.46176339515366e-11	NA	NA	NA	NA	NA
Solyc07g005870.3.1	2373	926.447025010918	260.275108155648	-1.83167114035214	0.000203029225137916	Down	1.5966101536601e-06	NA	NA	NA	NA	gi|565353388|ref|XP_006343614.1|//PREDICTED: uncharacterized protein Cbei_0202 [Solanum tuberosum];gi|723712206|ref|XP_010323197.1|//PREDICTED: uncharacterized protein LOC101247630 [Solanum lycopersicum]
Solyc00g102400.3.1	3299	72.928146064235	3.39383351671015	-4.42548801838292	2.33951565287629e-08	Down	8.89081088687606e-11	NA	GO:0032559//adenyl ribonucleotide binding	GO:0012501//programmed cell death;GO:0006950//response to stress	K13453;K13457//disease resistance protein RPM1	gi|723754589|ref|XP_010315011.1|//PREDICTED: LOW QUALITY PROTEIN: putative late blight resistance protein homolog R1B-14, partial [Solanum lycopersicum]
Solyc11g071450.2.1	349	3.24398937073632	19.7828327773211	2.60840802821457	0.024104897317881	Up	0.000517887510573431	NA	NA	NA	NA	NA
Solyc09g075180.3.1	3313	10326.8759612604	4727.9369296119	-1.12712118748162	0.00598657761666715	Down	8.51293223861958e-05	NA	GO:0003913//DNA photolyase activity	GO:0006259//DNA metabolic process	K19589//release factor glutamine methyltransferase [EC:2.1.1.297];K01669//deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]	gi|723731313|ref|XP_004247535.2|//PREDICTED: pentatricopeptide repeat-containing protein At3g62890 [Solanum lycopersicum]
Solyc04g015950.2.1	3028	780.119468749635	371.005076613903	-1.0722561495656	0.0194232819490178	Down	0.000388801821006037	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial	gi|698586533|ref|XP_009778941.1|//PREDICTED: pentatricopeptide repeat-containing protein At2g41720 [Nicotiana sylvestris];gi|723688862|ref|XP_004236606.2|//PREDICTED: pentatricopeptide repeat-containing protein At2g41720 isoform X1 [Solanum lycopersicum];gi|970024287|ref|XP_015073454.1|//PREDICTED: pentatricopeptide repeat-containing protein At2g41720 [Solanum pennellii];gi|697125986|ref|XP_009617024.1|//PREDICTED: pentatricopeptide repeat-containing protein At2g41720 isoform X1 [Nicotiana tomentosiformis]
Solyc09g010980.1.1	228	41.5567361815496	7.42397923586758	-2.48481777056667	0.00957639922714918	Down	0.00015374595816609	NA	NA	NA	NA	gi|697176544|ref|XP_009597230.1|//PREDICTED: uncharacterized protein LOC104093208 [Nicotiana tomentosiformis]
Solyc10g050325.1.1	2232	1.84894849989309	98.1586932860549	5.73033909761821	7.31877822580353e-16	Up	1.45951479086273e-18	NA	NA	NA	NA	gi|723750383|ref|XP_004252246.2|//PREDICTED: myosin-2 heavy chain [Solanum lycopersicum]
Solyc07g026710.2.1	2924	170.39878594646	3.98391738808605	-5.41858351500931	3.93507384470601e-19	Down	5.70505145360635e-22	NA	NA	NA	K17604//zinc finger SWIM domain-containing protein 3;K18789//xylogalacturonan beta-1,3-xylosyltransferase [EC:2.4.2.41];K14808//ATP-dependent RNA helicase DDX54/DBP10 [EC:3.6.4.13]	gi|565386601|ref|XP_006359098.1|//PREDICTED: uncharacterized protein LOC102578363 isoform X3 [Solanum tuberosum];gi|113205233|gb|AAT39304.2|//Transposon MuDR mudrA-like protein, putative [Solanum demissum]
Solyc02g083860.3.1	1311	2459.64973188481	271.194187431514	-3.18105471991222	1.74009469843122e-10	Down	5.30337022887944e-13	NA	GO:0043169//cation binding;GO:0016701//oxidoreductase activity, acting on single donors with incorporation of molecular oxygen;GO:0019842//vitamin binding;GO:0016706//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	GO:0009699//phenylpropanoid biosynthetic process	K00475//naringenin 3-dioxygenase [EC:1.14.11.9]	gi|460373360|ref|XP_004232488.1|//PREDICTED: naringenin,2-oxoglutarate 3-dioxygenase [Solanum lycopersicum]
Solyc02g049070.3.1	1415	2996.55875228896	1251.79853951734	-1.25930426231865	0.0142667965112969	Down	0.000258742368154611	NA	NA	NA	NA	gi|460371797|ref|XP_004231721.1|//PREDICTED: uncharacterized protein LOC101268332 [Solanum lycopersicum]
Solyc03g025390.3.1	1359	2485.6416651529	431.209596281581	-2.52715713993459	0.000421478188804342	Down	3.72680793050459e-06	NA	GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	GO:0008152//metabolic process	K19329//WW domain-containing oxidoreductase	gi|460377272|ref|XP_004234417.1|//PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Solanum lycopersicum]
Solyc04g081530.1.1	468	265.427939722126	1289.48837204935	2.28040661757692	0.001610075484071	Up	1.75080639235625e-05	NA	GO:0005515//protein binding	NA	K03686//molecular chaperone DnaJ	gi|934635627|ref|NP_001234377.2|//DNAJ-like protein [Solanum lycopersicum]
Solyc07g008920.3.1	1594	86.0750256236216	288.420465481996	1.74450692729515	0.0448182062215158	Up	0.00122597870049449	NA	NA	NA	K20464//oxysterol-binding protein-related protein 5/8	gi|723713085|ref|XP_010323355.1|//PREDICTED: oxysterol-binding protein-related protein 4C [Solanum lycopersicum]
Solyc07g042130.3.1	4413	624.731183769273	273.258048826993	-1.19297155338037	0.0438954077865124	Down	0.00118055794529964	NA	GO:0008270//zinc ion binding	NA	K15271//ATP-dependent DNA helicase HFM1/MER3 [EC:3.6.4.12];K03452//magnesium/proton exchanger;K11000//callose synthase [EC:2.4.1.-]	gi|747043438|ref|XP_011083787.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g50390, chloroplastic [Sesamum indicum];gi|460396269|ref|XP_004243699.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g50390, chloroplastic [Solanum lycopersicum]
Solyc05g056390.2.1	549	1685.82517115087	514.091753319447	-1.71335715431163	0.0379803880841794	Down	0.000954618626640775	NA	NA	NA	K04078//chaperonin GroES	gi|460387967|ref|XP_004239643.1|//PREDICTED: 10 kDa chaperonin [Solanum lycopersicum]
BGI_novel_G000464	759	1707.04508207756	4393.80934423802	1.36397111021779	0.00619990855091598	Up	8.90582079152102e-05	GO:0015934//large ribosomal subunit;GO:0005739//mitochondrion;GO:0009507//chloroplast	GO:0016740//transferase activity;GO:0003735//structural constituent of ribosome;GO:0019843//rRNA binding	GO:0006412//translation	K02886//large subunit ribosomal protein L2	gi|394831167|ref|YP_006503856.1|//ribosomal protein L2 (chloroplast) [Datura stramonium]
Solyc06g071230.3.1	2826	1866.64558626	4005.38450073796	1.10149270828619	0.0304197566584371	Up	0.000699966036813746	GO:0043231//intracellular membrane-bounded organelle	GO:0003676//nucleic acid binding	NA	K08869//aarF domain-containing kinase;K17613//calcineurin-binding protein cabin-1	gi|1001624551|ref|NP_001307462.1|//transcription factor MYB1R1 [Solanum lycopersicum]
Solyc02g091300.3.1	868	7.34279440833785	47.0242821845551	2.67900481000754	0.0100063417586341	Up	0.00016352728015638	NA	GO:0043169//cation binding	GO:0006812//cation transport	K07213//copper chaperone;K10752//histone-binding protein RBBP4	gi|460372369|ref|XP_004232003.1|//PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Solanum lycopersicum]
Solyc03g026280.3.1	897	748.138427178309	49.1697445561506	-3.92746246970437	6.95432608040821e-08	Down	2.84261323193181e-10	GO:0043231//intracellular membrane-bounded organelle	GO:0001071//nucleic acid binding transcription factor activity;GO:0003676//nucleic acid binding	GO:0006351//transcription, DNA-templated	K09286//EREBP-like factor	gi|350539177|ref|NP_001234123.1|//CBF1 protein [Solanum lycopersicum]
Solyc00g057880.3.1	1754	86.8580889440049	5.10030526758246	-4.09000470676531	8.2768613698353e-09	Down	2.8962941919505e-11	NA	NA	NA	K19983//exocyst complex component 1	gi|697161779|ref|XP_009589681.1|//PREDICTED: exocyst complex component SEC3A-like [Nicotiana tomentosiformis]
Solyc06g068570.3.1	1478	31.6066197071417	117.178915103578	1.89041434401078	0.0279279087211325	Up	0.000624193015778783	NA	NA	NA	K09285//AP2-like factor, ANT lineage	gi|460392132|ref|XP_004241671.1|//PREDICTED: AP2-like ethylene-responsive transcription factor At1g16060 [Solanum lycopersicum]
Solyc09g092520.3.1	1265	1376.26173846915	252.488032401817	-2.44646795617268	0.000534014013099839	Down	4.98308594832977e-06	GO:0030312//external encapsulating structure;GO:0005576//extracellular region	GO:0016758//transferase activity, transferring hexosyl groups;GO:0016798//hydrolase activity, acting on glycosyl bonds	GO:0044042//glucan metabolic process	K08235//xyloglucan:xyloglucosyl transferase [EC:2.4.1.207]	gi|836469025|ref|NP_001296797.1|//brassinosteroid-regulated protein BRU1 precursor [Solanum lycopersicum]
BGI_novel_G000487	2039	13.7852685608801	48.6230748962221	1.8185137576667	0.0443870886936815	Up	0.00120442262871302	NA	NA	NA	K14536//ribosome assembly protein 1 [EC:3.6.5.-]	gi|460413515|ref|XP_004252133.1|//PREDICTED: uncharacterized protein LOC101244932 [Solanum lycopersicum]
Solyc10g084180.2.1	2059	1545.54544580157	661.836815155108	-1.2235686264112	0.0129795641887051	Down	0.000231490139046778	NA	NA	NA	K14794//ribosomal RNA-processing protein 12;K12309//beta-galactosidase [EC:3.2.1.23]	gi|460408114|ref|XP_004249492.1|//PREDICTED: zinc finger protein JACKDAW [Solanum lycopersicum]
Solyc03g116680.3.1	1966	1214.35044131638	3352.84251710842	1.46519990194453	0.000310934303870507	Up	2.60896074662765e-06	NA	NA	NA	NA	gi|460380425|ref|XP_004235957.1|//PREDICTED: methyl-CpG-binding domain-containing protein 11-like [Solanum lycopersicum]
Solyc03g120320.1.1	1068	2.95864538961922	159.435675234363	5.75189388009753	1.69035203064017e-18	Up	2.60768458653147e-21	NA	NA	NA	NA	gi|723685332|ref|XP_010318559.1|//PREDICTED: F-box/kelch-repeat protein At1g80440-like [Solanum lycopersicum]
Solyc05g052980.3.1	1573	997.394611909203	4681.36534919172	2.23069304766358	2.61422606102988e-07	Up	1.18037072402297e-09	NA	GO:0004721//phosphoprotein phosphatase activity	NA	K14497//protein phosphatase 2C [EC:3.1.3.16]	gi|460388512|ref|XP_004239911.1|//PREDICTED: protein phosphatase 2C 37 [Solanum lycopersicum]
Solyc03g111310.3.1	2170	461.99458006283	1680.05726681755	1.86256257814916	0.000374154907617452	Up	3.23797376498528e-06	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	NA	gi|460381176|ref|XP_004236328.1|//PREDICTED: SNF1-related protein kinase regulatory subunit gamma-1 [Solanum lycopersicum];gi|970019912|ref|XP_015071163.1|//PREDICTED: SNF1-related protein kinase regulatory subunit gamma-1 [Solanum pennellii]
Solyc06g075510.3.1	2216	1369.32437166456	304.738654818476	-2.16781982256492	0.00225497145971094	Down	2.64616694616426e-05	NA	NA	NA	K09284//AP2-like factor, euAP2 lineage;K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|723706914|ref|XP_010322308.1|//PREDICTED: AP2 transcription factor SlAP2e isoform X1 [Solanum lycopersicum];gi|953953824|ref|NP_001233891.2|//AP2 transcription factor SlAP2e [Solanum lycopersicum]
Solyc09g011640.4.1	889	18.1690937585663	62.4127907637363	1.78035526032841	0.0425616800471991	Up	0.00111781061342307	NA	NA	NA	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|460401748|ref|XP_004246379.1|//PREDICTED: probable glutathione S-transferase [Solanum lycopersicum]
Solyc12g010400.2.1	758	235.424615520121	831.980836103745	1.82128512409619	1.91547130263681e-06	Up	1.04505150649937e-08	NA	NA	NA	K03768//peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]	gi|723748177|ref|XP_010313839.1|//PREDICTED: uncharacterized protein LOC101248846 [Solanum lycopersicum]
Solyc07g047790.3.1	2695	2894.33708823976	995.298074409182	-1.54003239729458	0.0247401020838299	Down	0.000532465605295959	GO:0044424//intracellular part	GO:0005515//protein binding;GO:0032559//adenyl ribonucleotide binding	GO:0044267//cellular protein metabolic process;GO:0050896//response to stimulus	K09487//heat shock protein 90kDa beta	gi|460395973|ref|XP_004243554.1|//PREDICTED: heat shock protein 83 [Solanum lycopersicum]
Solyc11g006465.1.1	1736	9279.5748277197	24885.9610270937	1.42320149052295	6.95432608040821e-08	Up	2.87833791942244e-10	NA	NA	NA	K09503//DnaJ homolog subfamily A member 2	gi|976925731|gb|KVI09623.1|//Chaperone DnaJ, C-terminal, partial [Cynara cardunculus var. scolymus];gi|806638830|ref|NP_001234241.2|//DnaJ-like protein [Solanum lycopersicum]
Solyc08g062760.1.1	540	174.182274823854	505.205318108432	1.53627200637302	0.0166091662586607	Up	0.000315597281883721	NA	NA	NA	NA	gi|460399088|ref|XP_004245075.1|//PREDICTED: proline-rich receptor-like protein kinase PERK8 [Solanum lycopersicum]
BGI_novel_G000416	4829	644.838983163242	4.45795818226242	-7.17641206960837	1.54450757366945e-32	Down	1.04605998893969e-35	NA	NA	NA	K17604//zinc finger SWIM domain-containing protein 3;K03549//KUP system potassium uptake protein;K14808//ATP-dependent RNA helicase DDX54/DBP10 [EC:3.6.4.13]	gi|970034293|ref|XP_015078464.1|//PREDICTED: uncharacterized protein LOC107022340 [Solanum pennellii]
Solyc03g121920.3.1	1851	1035.22356963887	3263.67373060173	1.65655446868749	0.00177452382081505	Up	1.9563362286895e-05	GO:0016020//membrane	NA	NA	K15121//solute carrier family 25, member 44	gi|723684859|ref|XP_010318490.1|//PREDICTED: solute carrier family 25 member 44 [Solanum lycopersicum]
Solyc09g018020.3.1	1339	98.016686270339	343.355166268881	1.80860239286286	0.0077914265574664	Up	0.000120197346899997	GO:0044464//cell part	NA	NA	K20628	gi|460401530|ref|XP_004246275.1|//PREDICTED: expansin-A10-like [Solanum lycopersicum]
Solyc03g113860.2.1	4210	67.963825171355	15.2236612076076	-2.1584516923658	0.00673949428143306	Down	0.000101743773553471	NA	NA	NA	K03501//16S rRNA (guanine527-N7)-methyltransferase [EC:2.1.1.170]	gi|723687481|ref|XP_010318938.1|//PREDICTED: LOW QUALITY PROTEIN: F-box/WD repeat-containing protein sel-10 [Solanum lycopersicum]
Solyc01g104900.3.1	984	45.5275436560375	147.1603276246	1.69257726435638	0.0144482870386773	Up	0.000263166682903948	NA	NA	NA	K13126//polyadenylate-binding protein;K05941//glutathione gamma-glutamylcysteinyltransferase [EC:2.3.2.15];K01054//acylglycerol lipase [EC:3.1.1.23]	gi|460369580|ref|XP_004230640.1|//PREDICTED: NAC transcription factor 25 [Solanum lycopersicum]
Solyc08g080390.3.1	3369	91.6923552483672	262.095923857323	1.51522155610214	0.00357983598383423	Up	4.47193267348822e-05	NA	GO:0046872//metal ion binding;GO:0016491//oxidoreductase activity	NA	K20556;K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30];K07408//cytochrome P450, family 1, subfamily A, polypeptide 1 [EC:1.14.14.1]	gi|460400245|ref|XP_004245646.1|//PREDICTED: probable (S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 [Solanum lycopersicum];gi|460400247|ref|XP_004245647.1|//PREDICTED: probable (S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 isoform X1 [Solanum lycopersicum]
Solyc02g076970.2.1	1131	6.97752214413298	33.2340498942972	2.25187540725172	0.0337671991192306	Up	0.000802982648280609	NA	NA	NA	K16292//KDEL-tailed cysteine endopeptidase [EC:3.4.22.-]	gi|460414501|ref|XP_004252607.1|//PREDICTED: senescence-specific cysteine protease SAG39-like [Solanum lycopersicum]
Solyc01g111280.2.1	837	115.688609756412	2.01166512710354	-5.84571285301716	2.50403120656062e-16	Down	4.71089890988565e-19	NA	GO:0046914//transition metal ion binding;GO:0003676//nucleic acid binding	GO:0006351//transcription, DNA-templated	K09250//cellular nucleic acid-binding protein;K18754//protein lin-28	gi|460370351|ref|XP_004231016.1|//PREDICTED: glycine-rich protein 2-like [Solanum lycopersicum]
Solyc08g082210.3.1	1754	205.468279194475	667.752819712687	1.70039847938996	0.01230385943198	Up	0.000213883548089504	NA	NA	NA	K09286//EREBP-like factor	gi|460399992|ref|XP_004245520.1|//PREDICTED: ethylene-responsive transcription factor ERF061-like [Solanum lycopersicum]
Solyc02g089160.3.1	2160	237.822794206866	80.2749128220658	-1.56686589900015	0.0337932872501948	Down	0.000804874546764997	GO:0031224//intrinsic component of membrane	GO:0005506//iron ion binding;GO:0016491//oxidoreductase activity	GO:0016129//phytosteroid biosynthetic process	K12640//brassinosteroid-6-oxidase 2 [EC:1.14.-.-]	gi|350536757|ref|NP_001234263.1|//cytochrome P450 85A1 [Solanum lycopersicum]
Solyc09g092605.1.1	525	31.8937940488034	159.389293239085	2.32120708724575	0.00297642316838993	Up	3.60615667765947e-05	NA	NA	NA	K00517;K20617//null;K11818//cytochrome P450, family 83, subfamily B, polypeptide 1 [EC:1.14.-.-]	gi|565385850|ref|XP_006358770.1|//PREDICTED: cytochrome P450 83B1-like [Solanum tuberosum]
Solyc01g066680.3.1	697	513.186999754367	1592.37806329709	1.63362637290782	0.00361897087528647	Up	4.56167078007663e-05	NA	NA	NA	NA	gi|460366768|ref|XP_004229251.1|//PREDICTED: phylloplanin-like [Solanum lycopersicum]
Solyc02g071710.2.1	1631	270.662350824835	73.611570376439	-1.87848976822686	0.0404530772327349	Down	0.00104394156718904	NA	NA	NA	K21026;K17604//zinc finger SWIM domain-containing protein 3;K01188//beta-glucosidase [EC:3.2.1.21];K00679//phospholipid:diacylglycerol acyltransferase [EC:2.3.1.158];K10960//geranylgeranyl reductase [EC:1.3.1.83]	gi|460374417|ref|XP_004233007.1|//PREDICTED: GDSL esterase/lipase At1g29670-like [Solanum lycopersicum]
Solyc01g097650.3.1	2148	47.2481235714	371.18661256696	2.97381573843661	0.000717596052725051	Up	6.85816297521025e-06	GO:0044464//cell part;GO:0016021//integral component of membrane	GO:0015194//L-serine transmembrane transporter activity	GO:0015825//L-serine transport	NA	gi|460368521|ref|XP_004230114.1|//PREDICTED: probable serine incorporator [Solanum lycopersicum]
BGI_novel_G000301	359	20.9899628746381	1.68562259947307	-3.63834614790335	0.000116000878589046	Down	8.55483019281822e-07	NA	NA	NA	NA	gi|971558281|ref|XP_015166153.1|//PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like [Solanum tuberosum]
Solyc03g095610.3.1	3246	28.4183727146835	150.9555401477	2.40922785465186	0.0184182448583735	Up	0.000366604640481603	NA	NA	NA	NA	gi|460379400|ref|XP_004235450.1|//PREDICTED: uncharacterized protein LOC101254071 [Solanum lycopersicum]
Solyc01g095720.3.1	3712	174.684643072617	479.707005941676	1.45740072651421	0.0167289803541106	Up	0.000319429959417357	NA	NA	NA	NA	gi|460370749|ref|XP_004231212.1|//PREDICTED: uncharacterized protein LOC101245704 [Solanum lycopersicum]
Solyc09g089520.3.1	609	513.339533799072	90.1569067961882	-2.50940344716862	0.00268251291593066	Down	3.21978259465658e-05	NA	GO:0004866//endopeptidase inhibitor activity	GO:0006950//response to stress	NA	gi|970051874|ref|XP_015087532.1|//PREDICTED: proteinase inhibitor I-B-like [Solanum pennellii]
Solyc07g008390.2.1	1827	152.622132879024	25.8760694524311	-2.56027379812619	0.0297014228587229	Down	0.000676475783596684	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13065//shikimate O-hydroxycinnamoyltransferase [EC:2.3.1.133];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|723712894|ref|XP_010323318.1|//PREDICTED: salutaridinol 7-O-acetyltransferase-like [Solanum lycopersicum]
Solyc04g071480.1.1	1167	1981.79825762658	792.995451411179	-1.32142561123043	0.00619990855091598	Down	8.91133335760208e-05	NA	NA	NA	NA	gi|460384186|ref|XP_004237794.1|//PREDICTED: uncharacterized protein LOC101243886 [Solanum lycopersicum]
BGI_novel_G000254	1349	1.86366482831349	28.3827586662333	3.92880049290296	1.1606295940578e-05	Up	7.16195407402937e-08	NA	NA	NA	NA	gi|723749624|ref|XP_010314114.1|//PREDICTED: uncharacterized protein LOC104644940 [Solanum lycopersicum]
Solyc06g008750.1.1	309	7.29506297817891	37.3107080542211	2.35459740070684	0.0210286161597339	Up	0.000435178495987268	NA	GO:0015036//disulfide oxidoreductase activity	GO:0019725//cellular homeostasis	K03676//glutaredoxin 3	gi|723704309|ref|XP_010321839.1|//PREDICTED: glutaredoxin-C11-like [Solanum lycopersicum]
Solyc12g006230.2.1	881	103.794384412496	480.300556004836	2.21020908698839	3.29196352376617e-12	Up	8.29896361863015e-15	NA	NA	NA	K16285//RING/U-box domain-containing protein [EC:2.3.2.27]	gi|723747243|ref|XP_010313683.1|//PREDICTED: probable E3 ubiquitin-protein ligase XERICO [Solanum lycopersicum]
Solyc03g117547.1.1	2181	37.0041401950474	150.374703349298	2.02280329103134	0.0350074782906927	Up	0.000858471045873263	NA	NA	NA	K05674//ATP-binding cassette, subfamily C (CFTR/MRP), member 10	gi|723686209|ref|XP_010318703.1|//PREDICTED: ABC transporter C family member 13 isoform X2 [Solanum lycopersicum]
BGI_novel_G000427	1632	662.351174962257	5.28171710156104	-6.97044548847031	1.81554860237558e-45	Down	2.73251097170573e-49	NA	NA	NA	K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6];K20093//DNA excision repair protein ERCC-6-like [EC:3.6.4.12];K03549//KUP system potassium uptake protein;K12447//UDP-sugar pyrophosphorylase [EC:2.7.7.64];K05658//ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:3.6.3.44]	gi|147785835|emb|CAN73071.1|//hypothetical protein VITISV_032383 [Vitis vinifera]
Solyc03g005450.3.1	2855	479.605493526799	1534.72988786962	1.67806467495429	0.00372211623584761	Up	4.70568933756556e-05	NA	GO:0016740//transferase activity	NA	K10999//cellulose synthase A [EC:2.4.1.12]	gi|460376498|ref|XP_004234035.1|//PREDICTED: cellulose synthase-like protein G2 [Solanum lycopersicum]
Solyc11g006890.2.1	1124	60.2886291944092	206.080339310101	1.77324904220324	0.0224553576292225	Up	0.000474843322708471	NA	NA	NA	NA	gi|970061895|ref|XP_015057820.1|//PREDICTED: uncharacterized protein LOC107004101 [Solanum pennellii]
Solyc03g121880.3.1	2430	2464.00979506991	7515.31060555747	1.60882474040538	1.93617990439903e-05	Up	1.26697090647299e-07	NA	GO:0046872//metal ion binding;GO:0004721//phosphoprotein phosphatase activity;GO:0004722//protein serine/threonine phosphatase activity	GO:0006470//protein dephosphorylation	K14497//protein phosphatase 2C [EC:3.1.3.16]	gi|930588892|ref|NP_001234686.2|//protein phosphatase 2C ABI2 homolog [Solanum lycopersicum]
Solyc03g006360.3.1	1710	18.4740666601258	456.784990337372	4.62794186141643	1.73660731258482e-08	Up	6.4689063455581e-11	NA	NA	NA	K03046//DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]	gi|460376654|ref|XP_004234112.1|//PREDICTED: auxin-repressed 12.5 kDa protein-like [Solanum lycopersicum]
Solyc07g052700.3.1	1147	29.2985789794103	528.454416559848	4.17287643413182	7.41526207457401e-18	Up	1.22764620266116e-20	NA	NA	NA	K09260//MADS-box transcription enhancer factor 2A;K04454//MADS-box transcription enhancer factor 2C	gi|460395756|ref|XP_004243447.1|//PREDICTED: MADS-box protein FBP24 [Solanum lycopersicum]
Solyc06g069880.1.1	1413	125.662701244888	617.118694329102	2.29599150099939	0.00372478398720081	Up	4.77226074114898e-05	NA	NA	NA	NA	gi|460391943|ref|XP_004241577.1|//PREDICTED: protein PHYTOCHROME KINASE SUBSTRATE 3-like [Solanum lycopersicum]
Solyc06g062370.3.1	959	2516.2140278479	446.240294552076	-2.49536194544263	0.0224434697690668	Down	0.000471214062201877	NA	NA	NA	K20728	gi|460392702|ref|XP_004241953.1|//PREDICTED: acid phosphatase 1 [Solanum lycopersicum]
Solyc02g085745.1.1	1667	2103.94237539509	4843.46416979359	1.20294407778943	0.0461838703776888	Up	0.00129134061372845	GO:0016021//integral component of membrane	GO:0004252//serine-type endopeptidase activity	GO:0006508//proteolysis	K09650//rhomboid-like protein [EC:3.4.21.105];K01240//uridine nucleosidase [EC:3.2.2.3]	gi|460373127|ref|XP_004232374.1|//PREDICTED: uncharacterized protein LOC101248255 [Solanum lycopersicum]
Solyc03g025935.1.1	802	3.35294968473459	59.8192338278296	4.15710669342179	6.95432608040821e-08	Up	2.87698903778891e-10	NA	NA	NA	K10269//F-box and leucine-rich repeat protein 3	gi|565373534|ref|XP_006353326.1|//PREDICTED: F-box/LRR-repeat protein At3g48880-like [Solanum tuberosum]
Solyc11g066950.2.1	518	216.250920130606	75.2065392368202	-1.52377625597108	0.000676890852562499	Down	6.41819975338638e-06	NA	NA	NA	NA	gi|460411241|ref|XP_004251022.1|//PREDICTED: uncharacterized protein At5g22580 [Solanum lycopersicum]
Solyc01g080020.2.1	1631	1359.49624274508	4517.1763411733	1.73234907051403	0.0303906933534798	Up	0.000697532563706313	NA	NA	NA	K00924;K02882//large subunit ribosomal protein L18Ae	gi|460367144|ref|XP_004229435.1|//PREDICTED: basic 7S globulin-like [Solanum lycopersicum]
Solyc02g091370.2.1	1695	82.2360743107827	231.002039985645	1.49006229057368	0.0335635597550745	Up	0.00079687723239839	NA	GO:0016758//transferase activity, transferring hexosyl groups	GO:0008152//metabolic process	K04628//2-hydroxyacylsphingosine 1-beta-galactosyltransferase [EC:2.4.1.45];K13493//cytokinin-N-glucosyltransferase [EC:2.4.1.-];K13030//cyanohydrin beta-glucosyltransferase [EC:2.4.1.85];K00699//glucuronosyltransferase [EC:2.4.1.17]	gi|723669926|ref|XP_010316060.1|//PREDICTED: 7-deoxyloganetic acid glucosyltransferase-like isoform X2 [Solanum lycopersicum];gi|460372355|ref|XP_004231996.1|//PREDICTED: 7-deoxyloganetic acid glucosyltransferase-like isoform X1 [Solanum lycopersicum]
Solyc12g009530.1.1	1467	39.9721105936277	2.13870720372012	-4.2241828601733	1.79458132146423e-07	Down	7.83276642547505e-10	NA	NA	NA	K10406//kinesin family member C2/C3	gi|970064679|ref|XP_015059311.1|//PREDICTED: receptor-like protein 12 [Solanum pennellii]
Solyc04g071140.3.1	3792	1350.30473540397	4776.30555647123	1.82261010367644	0.00654810812151726	Up	9.60891811488028e-05	GO:0005829//cytosol;GO:0005886//plasma membrane	GO:0016831//carboxy-lyase activity;GO:0048037//cofactor binding;GO:0016830//carbon-carbon lyase activity;GO:0030170//pyridoxal phosphate binding	GO:0019752//carboxylic acid metabolic process;GO:0003006//developmental process involved in reproduction;GO:0006580//ethanolamine metabolic process	K01590//histidine decarboxylase [EC:4.1.1.22]	gi|460384145|ref|XP_004237774.1|//PREDICTED: serine decarboxylase [Solanum lycopersicum]
BGI_novel_G000012	520	41.2063605749742	4.47319783356264	-3.20348857752941	0.00200115683942092	Down	2.23821708317226e-05	NA	NA	NA	K14565//nucleolar protein 58;K11131//H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]	gi|15144506|gb|AAK84473.1|//unknown [Solanum lycopersicum]
Solyc01g006090.3.1	1184	288.431933208482	98.37479717429	-1.55187023749894	0.00151316867076784	Down	1.62265519497624e-05	NA	NA	NA	K14823//rRNA-processing protein EBP2	gi|460365592|ref|XP_004228685.1|//PREDICTED: probable rRNA-processing protein EBP2 homolog [Solanum lycopersicum]
Solyc01g098130.2.1	880	790.665368547337	3014.09854528436	1.93058744576267	0.0169844775232726	Up	0.00032975455289402	NA	NA	NA	K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]	gi|971551310|ref|XP_015164435.1|//PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like isoform X2 [Solanum tuberosum];gi|971551308|ref|XP_015164434.1|//PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like isoform X1 [Solanum tuberosum]
Solyc05g053850.3.1	674	445.388949034722	1661.88781931234	1.89968533303468	0.0221269813978195	Up	0.000462071515814044	NA	NA	NA	K16223//protein FLOWERING LOCUS T	gi|460388380|ref|XP_004239845.1|//PREDICTED: protein FLOWERING LOCUS T [Solanum lycopersicum]
Solyc04g079410.3.1	1443	171.71551306815	356.011600684618	1.05190387164108	0.0123180589286654	Up	0.000215865077804342	NA	NA	NA	K01810//glucose-6-phosphate isomerase [EC:5.3.1.9]	gi|460384988|ref|XP_004238188.1|//PREDICTED: protein OSB1, mitochondrial-like [Solanum lycopersicum]
Solyc02g080350.1.1	1371	31.7007327004553	7.60835129503171	-2.05886042043681	0.0269703121951147	Down	0.000596701793683541	NA	NA	NA	K03798//cell division protease FtsH [EC:3.4.24.-];K10683//BRCA1-associated RING domain protein 1	gi|723673930|ref|XP_010316600.1|//PREDICTED: pentatricopeptide repeat-containing protein At1g77170 [Solanum lycopersicum]
Solyc03g005320.3.1	1734	297.648007014678	66.3141747639604	-2.16621804757897	0.0224553576292225	Down	0.000474342997910145	GO:0044464//cell part	GO:0016747//transferase activity, transferring acyl groups other than amino-acyl groups	GO:0006631//fatty acid metabolic process	K15397//3-ketoacyl-CoA synthase [EC:2.3.1.199]	gi|460376478|ref|XP_004234025.1|//PREDICTED: 3-ketoacyl-CoA synthase 11-like [Solanum lycopersicum]
Solyc04g079730.1.1	1605	593.025179319744	178.812216236842	-1.72964805852666	0.0205174121014206	Down	0.000419538975303722	NA	NA	NA	K01723//hydroperoxide dehydratase [EC:4.2.1.92]	gi|924183868|ref|NP_001234833.2|//allene oxide synthase [Solanum lycopersicum]
Solyc02g081810.3.1	1662	3703.93672875128	1546.6749507272	-1.25988942266581	0.0443870886936815	Down	0.0012044795577426	NA	GO:0016866//intramolecular transferase activity;GO:0003676//nucleic acid binding	GO:0010467//gene expression;GO:0009451//RNA modification	K11131//H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]	gi|460373659|ref|XP_004232632.1|//PREDICTED: H/ACA ribonucleoprotein complex subunit 4 [Solanum lycopersicum]
Solyc05g015510.3.1	3446	722.503293009833	1480.95602890029	1.03545273794573	0.0450282815007103	Up	0.00123680797289079	GO:0005634//nucleus	GO:0003677//DNA binding	NA	K20641;K13415//protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1]	gi|460387080|ref|XP_004239217.1|//PREDICTED: squamosa promoter-binding-like protein 12 [Solanum lycopersicum]
Solyc02g085285.1.1	3089	718.412930488309	2073.34886624057	1.5290776658738	0.0267450081167524	Up	0.00058970443452673	NA	NA	NA	NA	NA
Solyc02g072540.3.1	1690	681.033283921	1704.221892821	1.32331597589346	0.0452034848905878	Up	0.00124672289667009	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process;GO:0023052//signaling	K07198//5'-AMP-activated protein kinase, catalytic alpha subunit [EC:2.7.11.11]	gi|460374515|ref|XP_004233056.1|//PREDICTED: CBL-interacting serine/threonine-protein kinase 20 [Solanum lycopersicum]
Solyc10g084960.2.1	1448	38.83730768755	195.469122985986	2.33142563455201	0.023886403289259	Up	0.00051229446043111	NA	GO:0016765//transferase activity, transferring alkyl or aryl (other than methyl) groups	GO:0009755//hormone-mediated signaling pathway	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|460408228|ref|XP_004249548.1|//PREDICTED: probable glutathione S-transferase [Solanum lycopersicum]
Solyc12g039080.2.1	2106	7.50889434587665	455.543009057465	5.92284296659819	2.22932985925509e-22	Up	2.68422152598724e-25	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K16224//senescence-induced receptor-like serine/threonine-protein kinase	gi|970053435|ref|XP_015088357.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g67720 isoform X1 [Solanum pennellii];gi|460402398|ref|XP_004246699.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g67720 [Solanum lycopersicum]
Solyc10g081840.2.1	768	39.0571721658781	284.438154543468	2.86445559760489	2.86839012193377e-12	Up	7.12321737019336e-15	NA	NA	NA	K08064//nuclear transcription factor Y, alpha	gi|723738974|ref|XP_010312213.1|//PREDICTED: nuclear transcription factor Y subunit A-10-like isoform X1 [Solanum lycopersicum];gi|970057747|ref|XP_015055541.1|//PREDICTED: nuclear transcription factor Y subunit A-2-like [Solanum pennellii]
Solyc11g044910.2.1	2609	166.716183487838	926.35333213778	2.47416841847374	0.0116382782132705	Up	0.000199271258832731	NA	GO:0016798//hydrolase activity, acting on glycosyl bonds	GO:0044238//primary metabolic process	K15920//beta-D-xylosidase 4 [EC:3.2.1.37]	gi|925114422|ref|NP_001266104.2|//SlArf/Xyl1 protein precursor [Solanum lycopersicum]
Solyc01g095305.1.1	4196	65071.8929609772	3178.78295842278	-4.35548810244401	4.87272738649444e-11	Down	1.44841578633051e-13	NA	NA	NA	K01555//fumarylacetoacetase [EC:3.7.1.2];K14306//nuclear pore complex protein Nup62	gi|460368215|ref|XP_004229963.1|//PREDICTED: BAG family molecular chaperone regulator 6 [Solanum lycopersicum]
Solyc12g009510.1.1	3282	218.865083573942	28.4275972725761	-2.9446777426094	0.000230604966246356	Down	1.85684850723258e-06	NA	NA	NA	K10406//kinesin family member C2/C3	gi|970064679|ref|XP_015059311.1|//PREDICTED: receptor-like protein 12 [Solanum pennellii];gi|723747890|ref|XP_010313777.1|//PREDICTED: receptor-like protein 12 [Solanum lycopersicum];gi|723747887|ref|XP_010313776.1|//PREDICTED: receptor-like protein 12 [Solanum lycopersicum]
Solyc03g097820.2.1	1923	190.065007448178	57.5642733575056	-1.72324734277493	0.0224553576292225	Down	0.00047414623492005	GO:0043231//intracellular membrane-bounded organelle	NA	NA	K11253//histone H3;K07953//GTP-binding protein SAR1 [EC:3.6.5.-];K12126//phytochrome-interacting factor 3	gi|930425303|ref|NP_001266190.2|//basic helix-loop-helix [Solanum lycopersicum]
Solyc04g082420.3.1	3805	1463.16037534575	5117.10906511805	1.80624107270437	0.0406841614932843	Up	0.00105965970373583	NA	NA	GO:0009987//cellular process	K10523//speckle-type POZ protein	gi|723696277|ref|XP_010320455.1|//PREDICTED: BTB/POZ domain-containing protein At2g30600 isoform X1 [Solanum lycopersicum]
Solyc07g045145.1.1	1145	39.0426052050854	184.741855523129	2.24238953525417	0.00466720849149171	Up	6.39223347594906e-05	NA	NA	GO:0003006//developmental process involved in reproduction	NA	gi|460396073|ref|XP_004243604.1|//PREDICTED: uncharacterized membrane protein At3g27390 [Solanum lycopersicum]