GeneID	Length	R-Expression	RT-Expression	log2FoldChange(RT/R)	Padj	Up/Down-Regulation	Pvalue	Cellular Component	Molecular Function	Biological Process	Kegg Orthology	Nr Description
Solyc12g049220.2.1	746	269.377926222581	540.119118133915	1.00364597891134	9.20898276494666e-05	Up	1.59512982364347e-05	NA	NA	NA	K17794//mitochondrial import inner membrane translocase subunit TIM23	gi|460414057|ref|XP_004252391.1|//PREDICTED: mitochondrial import inner membrane translocase subunit TIM23-2-like [Solanum lycopersicum]
Solyc07g055900.1.1	2129	215.077892461019	66.7034788357888	-1.68902532946441	0.000447852055682485	Down	9.11963538166624e-05	NA	NA	NA	K15255//ATP-dependent DNA helicase PIF1 [EC:3.6.4.12]	gi|723714713|ref|XP_010323643.1|//PREDICTED: ATP-dependent DNA helicase PIF1-like [Solanum lycopersicum]
Solyc06g053320.3.1	3772	1135.59928428878	2811.51095179006	1.30789182175987	5.50401860944944e-05	Up	9.09882307026549e-06	NA	NA	NA	K13190//RNA-binding protein 15	gi|460390743|ref|XP_004240984.1|//PREDICTED: flowering time control protein FPA [Solanum lycopersicum]
Solyc04g077980.1.1	783	2096.62025857519	20964.0346879306	3.3217789130252	5.55509581809491e-07	Up	6.17462939077048e-08	NA	GO:0005488//binding	NA	K05747//Wiskott-Aldrich syndrome protein	gi|350535661|ref|NP_001234718.1|//C2H2-type zinc finger protein [Solanum lycopersicum]
Solyc03g006300.2.1	3484	204.75920370074	68.6571903466455	-1.57644557656876	0.00959589143431654	Down	0.00279278068880064	NA	NA	NA	K00924	gi|460376632|ref|XP_004234101.1|//PREDICTED: receptor-like protein kinase HSL1 isoform X1 [Solanum lycopersicum]
Solyc01g097290.3.1	1625	3229.46640463729	1024.89598244493	-1.6558183154671	0.0228690369299706	Down	0.00752441437978419	GO:0005634//nucleus	NA	GO:0006355//regulation of transcription, DNA-templated;GO:0009734//auxin-activated signaling pathway	K14484//auxin-responsive protein IAA	gi|525313303|ref|NP_001266049.1|//IAA9 protein [Solanum lycopersicum]
Solyc07g006310.1.1	826	25.2386916780891	5.5937480420205	-2.17374994852214	0.00370133840896191	Down	0.000955687012035156	GO:0043231//intracellular membrane-bounded organelle	NA	NA	NA	gi|460394110|ref|XP_004242648.1|//PREDICTED: uncharacterized protein LOC101259451 [Solanum lycopersicum]
Solyc07g045050.3.1	1850	2132.39734762295	521.99124325813	-2.03037878274372	8.81866862516943e-06	Down	1.24450124552302e-06	GO:0044424//intracellular part	GO:0016702//oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen;GO:0043169//cation binding	GO:0006558//L-phenylalanine metabolic process;GO:0006570//tyrosine metabolic process	K00457//4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]	gi|460396083|ref|XP_004243609.1|//PREDICTED: 4-hydroxyphenylpyruvate dioxygenase [Solanum lycopersicum]
Solyc00g080750.3.1	977	55.4058727021897	1674.72607015014	4.91774242568905	2.45374837226194e-34	Up	1.21644749333099e-36	NA	NA	NA	NA	gi|460416141|ref|XP_004253408.1|//PREDICTED: uncharacterized protein At1g66480-like [Solanum lycopersicum]
Solyc10g085610.2.1	2263	103.927173998979	18.8411380061231	-2.46361491569005	0.000189601790191224	Down	3.54496264946764e-05	NA	NA	NA	NA	gi|460408793|ref|XP_004249826.1|//PREDICTED: uncharacterized protein LOC101259598 [Solanum lycopersicum]
Solyc08g007130.3.1	2029	1426.68389697804	75.7837726214762	-4.2346329484684	2.89570491347223e-15	Down	9.00262376031727e-17	NA	GO:0016160//amylase activity;GO:0043167//ion binding	GO:0005976//polysaccharide metabolic process	K01177//beta-amylase [EC:3.2.1.2]	gi|460397997|ref|XP_004244551.1|//PREDICTED: beta-amylase 3, chloroplastic-like [Solanum lycopersicum]
Solyc06g064550.3.1	2052	1222.18349873487	62.1943259920195	-4.29653412871472	6.09995833720523e-08	Down	5.73206909501058e-09	NA	NA	NA	K12524//bifunctional aspartokinase / homoserine dehydrogenase 1 [EC:2.7.2.4 1.1.1.3]	gi|460392493|ref|XP_004241850.1|//PREDICTED: bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic [Solanum lycopersicum];gi|970035580|ref|XP_015079124.1|//PREDICTED: bifunctional aspartokinase/homoserine dehydrogenase 1, chloroplastic-like [Solanum pennellii]
Solyc06g083760.3.1	4269	1139.34085462717	494.71484164684	-1.20353033349605	0.0279460907338784	Down	0.0094865457102069	NA	NA	NA	K11420//euchromatic histone-lysine N-methyltransferase [EC:2.1.1.43];K11433//histone-lysine N-methyltransferase SETMAR [EC:2.1.1.43]	gi|460393552|ref|XP_004242373.1|//PREDICTED: uncharacterized protein LOC101264639 isoform X2 [Solanum lycopersicum]
Solyc04g074580.1.1	822	3927.07407680514	18811.0316541865	2.26005225573495	3.72042734796401e-11	Up	2.10234376752402e-12	GO:0043231//intracellular membrane-bounded organelle;GO:0005634//nucleus;GO:0000785//chromatin;GO:0016021//integral component of membrane;GO:0000786//nucleosome	GO:0003677//DNA binding;GO:0046982//protein heterodimerization activity;GO:0003676//nucleic acid binding	GO:0034728//nucleosome organization	K11253//histone H3	gi|593801262|ref|XP_007163668.1|//hypothetical protein PHAVU_001G253800g [Phaseolus vulgaris];gi|147826736|emb|CAN70652.1|//hypothetical protein VITISV_010022 [Vitis vinifera]
Solyc01g067000.3.1	945	1143.20046594805	5067.12901644911	2.14809015287174	2.58435764944178e-06	Up	3.28391055126996e-07	NA	NA	NA	NA	gi|460366900|ref|XP_004229314.1|//PREDICTED: U1 small nuclear ribonucleoprotein C-like [Solanum lycopersicum]
Solyc01g090640.3.1	5217	86.1258455485675	791.414565648382	3.19991547095042	6.30048003489725e-15	Up	2.04082195852308e-16	NA	NA	NA	K20092//chromodomain-helicase-DNA-binding protein 1-like [EC:3.6.4.12]	gi|723660491|ref|XP_010325463.1|//PREDICTED: LOW QUALITY PROTEIN: chromodomain-helicase-DNA-binding protein 1-like [Solanum lycopersicum];gi|971551516|ref|XP_015164493.1|//PREDICTED: chromodomain-helicase-DNA-binding protein 1-like isoform X2 [Solanum tuberosum]
Solyc12g055940.2.1	2726	1634.56939134222	371.429181252496	-2.13775155436738	3.20617084243346e-08	Down	2.85266505177004e-09	NA	NA	NA	NA	gi|460414511|ref|XP_004252612.1|//PREDICTED: uncharacterized protein LOC101247896 [Solanum lycopersicum]
Solyc10g009540.1.1	798	19.0957492079294	1.81897346256475	-3.39205512373342	0.0175717401868047	Down	0.00554176583124179	NA	NA	NA	K08695//anthocyanidin reductase [EC:1.3.1.77];K13082//bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase [EC:1.1.1.219 1.1.1.234]	gi|723735179|ref|XP_010327251.1|//PREDICTED: anthocyanidin reductase-like [Solanum lycopersicum]
Solyc05g052780.3.1	1040	1434.9909542602	3826.76811982059	1.41508484199193	2.47239724055909e-06	Up	3.13242814248559e-07	NA	GO:0046914//transition metal ion binding	NA	K09377//cysteine and glycine-rich protein	gi|460388546|ref|XP_004239928.1|//PREDICTED: LIM domain-containing protein WLIM2b isoform X1 [Solanum lycopersicum]
Solyc06g069550.1.1	1443	8.82542466829337	187.570682566923	4.40962484025426	1.22212355973845e-09	Up	8.77370648597081e-11	NA	GO:0016616//oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;GO:0000166//nucleotide binding	GO:0008152//metabolic process	K00012//UDPglucose 6-dehydrogenase [EC:1.1.1.22]	gi|460391985|ref|XP_004241598.1|//PREDICTED: UDP-glucose 6-dehydrogenase 5-like [Solanum lycopersicum]
Solyc01g111600.3.1	491	548.993553098793	1242.90423785531	1.17885403253821	0.00125016063355369	Up	0.000283741915077844	GO:0016020//membrane	GO:0043169//cation binding	GO:0006812//cation transport;GO:0009408//response to heat	K07213//copper chaperone;K10752//histone-binding protein RBBP4	gi|460370407|ref|XP_004231044.1|//PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Solanum lycopersicum]
Solyc10g083320.2.1	360	3.85603970673428	21.5075243673689	2.47964965970164	0.0165493253398163	Up	0.00516750031204865	NA	NA	NA	K14488//SAUR family protein	gi|460408002|ref|XP_004249437.1|//PREDICTED: auxin-induced protein 15A-like [Solanum lycopersicum]
Solyc05g007290.2.1	4929	117.078622116236	42.2252215907604	-1.47130077288379	0.0057056111442129	Down	0.00155294366240654	NA	NA	NA	K10615//E3 ubiquitin-protein ligase HERC4 [EC:2.3.2.26]	gi|460386201|ref|XP_004238788.1|//PREDICTED: uncharacterized protein LOC101262813 [Solanum lycopersicum]
Solyc06g072550.3.1	925	46.6311765502951	177.312494924901	1.92692746834656	0.000133267217996931	Up	2.40226728132235e-05	NA	NA	NA	NA	gi|460391702|ref|XP_004241458.1|//PREDICTED: CASP-like protein 1F1 [Solanum lycopersicum]
Solyc01g100020.3.1	3722	180.354199048059	24.3210252956627	-2.8905570581483	4.51347446035156e-06	Down	5.97074730124783e-07	NA	NA	NA	K01115//phospholipase D1/2 [EC:3.1.4.4]	gi|969997343|ref|XP_015067417.1|//PREDICTED: LOW QUALITY PROTEIN: phospholipase D zeta 1-like [Solanum pennellii];gi|723662992|ref|XP_010313256.1|//PREDICTED: LOW QUALITY PROTEIN: phospholipase D p1 [Solanum lycopersicum]
Solyc03g058190.3.1	2614	16839.1356108224	3156.04475040847	-2.41562851668398	1.11326805624459e-06	Down	1.32107614694917e-07	GO:0044464//cell part	GO:0032561//guanyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity	GO:0009207//purine ribonucleoside triphosphate catabolic process	K06207//GTP-binding protein	gi|460377992|ref|XP_004234769.1|//PREDICTED: translation factor GUF1 homolog, chloroplastic [Solanum lycopersicum]
Solyc04g077690.2.1	669	161.572242234521	5.10640410088909	-4.98372784571421	1.04015760809557e-07	Down	1.01503377739458e-08	NA	NA	NA	NA	gi|460384772|ref|XP_004238083.1|//PREDICTED: uncharacterized protein LOC101256378 [Solanum lycopersicum]
Solyc01g103950.3.1	4696	1274.21663239593	373.302055770439	-1.77119521554867	3.67391617068628e-08	Down	3.30718188169352e-09	NA	NA	NA	K14153//hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase [EC:2.7.1.49 2.7.4.7 2.5.1.3]	gi|723663933|ref|XP_010314660.1|//PREDICTED: thiamine biosynthetic bifunctional enzyme TH1, chloroplastic isoform X1 [Solanum lycopersicum];gi|723663936|ref|XP_004230476.2|//PREDICTED: thiamine biosynthetic bifunctional enzyme TH1, chloroplastic isoform X2 [Solanum lycopersicum]
Solyc01g006500.3.1	1792	289.66229559992	108.99992129252	-1.41004481265176	1.52862519089647e-05	Down	2.25856764828759e-06	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial	gi|460365528|ref|XP_004228653.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g48730, chloroplastic [Solanum lycopersicum]
Solyc12g096270.2.1	778	199.369743202388	881.758058081718	2.14493637527642	8.27371474847906e-12	Up	4.20038746363071e-13	NA	NA	NA	K07973//guanine nucleotide-binding protein subunit gamma, other;K03320//ammonium transporter, Amt family	gi|460415451|ref|XP_004253072.1|//PREDICTED: guanine nucleotide-binding protein subunit gamma 2-like [Solanum lycopersicum]
Solyc02g069450.3.1	1442	9180.57385050392	1239.11923102058	-2.88926932132497	7.36912487355176e-08	Down	7.03181738343988e-09	GO:0009522//photosystem I	NA	GO:0044237//cellular metabolic process	K02694//photosystem I subunit III	gi|460374804|ref|XP_004233199.1|//PREDICTED: photosystem I reaction center subunit III, chloroplastic-like [Solanum lycopersicum];gi|460374802|ref|XP_004233198.1|//PREDICTED: photosystem I reaction center subunit III, chloroplastic-like [Solanum lycopersicum]
Solyc04g009420.3.1	792	734.690101563114	29.273710928124	-4.64945828944401	8.81364361914674e-14	Down	3.39693883338219e-15	NA	NA	NA	K02717//photosystem II oxygen-evolving enhancer protein 2	gi|460382195|ref|XP_004236825.1|//PREDICTED: psbP domain-containing protein 2, chloroplastic [Solanum lycopersicum]
Solyc07g056320.3.1	1881	334.707271440019	1197.87616236667	1.83950696988023	0.000418770588571512	Up	8.46657101689236e-05	NA	NA	NA	K13508//glycerol-3-phosphate acyltransferase [EC:2.3.1.15]	gi|460395264|ref|XP_004243204.1|//PREDICTED: glycerol-3-phosphate acyltransferase 1 [Solanum lycopersicum]
Solyc10g046970.2.1	2170	1090.83129514464	4063.46371214716	1.89728201483826	3.56583309707478e-08	Up	3.20053512509165e-09	GO:0005929//cilium	GO:0035091//phosphatidylinositol binding	GO:0061512//protein localization to cilium	K19600//tubby-related protein 1	gi|808154161|ref|NP_001294886.1|//tubby-like F-box protein 8 [Solanum lycopersicum]
Solyc01g059930.3.1	2901	2337.42021293082	5144.1274243979	1.13800925996722	0.00482276744503391	Up	0.00128353062313784	NA	NA	GO:0050896//response to stimulus	K01051//pectinesterase [EC:3.1.1.11]	gi|723656964|ref|XP_010318963.1|//PREDICTED: pectinesterase 2-like [Solanum lycopersicum]
Solyc04g056510.1.1	207	0.412777704162453	12.9571386584189	4.97223830405297	0.000799468902709013	Up	0.000173434807431283	NA	NA	NA	NA	gi|971555804|ref|XP_015165531.1|//PREDICTED: bZIP transcription factor 17-like [Solanum tuberosum]
Solyc01g100230.3.1	1054	719.530383035695	2375.52135703673	1.7231166644059	3.38141905066386e-07	Up	3.62240880856118e-08	NA	GO:0005515//protein binding	NA	K09510//DnaJ homolog subfamily B member 4;K09512//DnaJ homolog subfamily B member 6;K09514//DnaJ homolog subfamily B member 8	gi|460368861|ref|XP_004230283.1|//PREDICTED: dnaJ homolog subfamily B member 3 [Solanum lycopersicum]
Solyc12g088200.2.1	1984	330.336425906457	925.841305161985	1.48682886485498	0.00656498758276933	Up	0.0018196379776902	NA	NA	NA	K00913//inositol-1,3,4-trisphosphate 5/6-kinase / inositol-tetrakisphosphate 1-kinase [EC:2.7.1.159 2.7.1.134]	gi|460414758|ref|XP_004252730.1|//PREDICTED: inositol-tetrakisphosphate 1-kinase 2 [Solanum lycopersicum]
Solyc05g008820.3.1	1535	69.5738331635228	1160.02210239507	4.05946367563566	3.58159963362676e-13	Up	1.49522573045399e-14	NA	NA	NA	K18693//diacylglycerol diphosphate phosphatase / phosphatidate phosphatase [EC:3.1.3.81 3.1.3.4]	gi|460386408|ref|XP_004238890.1|//PREDICTED: putative lipid phosphate phosphatase 3, chloroplastic isoform X2 [Solanum lycopersicum];gi|723697774|ref|XP_010320737.1|//PREDICTED: lipid phosphate phosphatase 2-like isoform X1 [Solanum lycopersicum]
Solyc07g063720.1.1	2394	8.24065196992886	128.591303073886	3.96389078032645	7.13157053552358e-05	Up	1.20580933106663e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723719112|ref|XP_010324436.1|//PREDICTED: uncharacterized protein LOC101244686 [Solanum lycopersicum]
Solyc06g054640.2.1	1988	28.864632617679	6.43891470881202	-2.16441341819592	0.00457618590695103	Down	0.0012107412989242	NA	NA	NA	NA	gi|970035095|ref|XP_015078878.1|//PREDICTED: uncharacterized protein LOC107022804 isoform X2 [Solanum pennellii]
Solyc07g062120.3.1	2565	500.344709103078	148.518407387942	-1.75228062252571	2.41420253296514e-11	Down	1.33002510202865e-12	GO:0016021//integral component of membrane	GO:0051119//sugar transmembrane transporter activity	GO:0034219//carbohydrate transmembrane transport	K15382//solute carrier family 50 (sugar transporter)	gi|723718945|ref|XP_010324405.1|//PREDICTED: uncharacterized protein LOC104648570 [Solanum lycopersicum];gi|460397484|ref|XP_004244297.1|//PREDICTED: bidirectional sugar transporter SWEET2 [Solanum lycopersicum]
Solyc12g036415.1.1	449	74.6205555258731	312.153786217929	2.06461195912764	0.0298872379519563	Up	0.0102535462244597	NA	NA	NA	NA	gi|947068904|gb|KRH17795.1|//hypothetical protein GLYMA_13G016700 [Glycine max]
Solyc11g005280.1.1	627	33.7343755437424	104.057192524717	1.62508532736894	0.00554258893196224	Up	0.00150134164934284	NA	NA	NA	K19040//E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:2.3.2.27]	gi|460408870|ref|XP_004249864.1|//PREDICTED: RING-H2 finger protein ATL78-like [Solanum lycopersicum]
Solyc04g049555.1.1	1597	127.874109335272	425.774401145098	1.7353650217825	0.00592537493739617	Up	0.00162247667698346	NA	NA	NA	NA	gi|723692783|ref|XP_004237536.2|//PREDICTED: uncharacterized protein LOC101255684 isoform X1 [Solanum lycopersicum];gi|723692786|ref|XP_010319855.1|//PREDICTED: uncharacterized protein LOC101255684 isoform X2 [Solanum lycopersicum]
Solyc11g031960.2.1	1282	245.611842863939	81.4499518119606	-1.59239437564789	0.0140050978319187	Down	0.0042744051382045	NA	GO:0016787//hydrolase activity	GO:0044238//primary metabolic process	K21026;K17604//zinc finger SWIM domain-containing protein 3;K01188//beta-glucosidase [EC:3.2.1.21];K00679//phospholipid:diacylglycerol acyltransferase [EC:2.3.1.158];K10960//geranylgeranyl reductase [EC:1.3.1.83]	gi|460410468|ref|XP_004250650.1|//PREDICTED: GDSL esterase/lipase At1g33811 [Solanum lycopersicum]
Solyc11g006240.1.1	369	0.39153582273814	8.31837040062094	4.40908471179323	0.00482310777059112	Up	0.00128380097621109	NA	NA	NA	NA	NA
Solyc10g005300.3.1	2246	8.75907795967258	48.52378617179	2.46984120919909	0.000137689190730517	Up	2.49121563965233e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460405876|ref|XP_004248400.1|//PREDICTED: serine/threonine-protein kinase PBS1-like [Solanum lycopersicum]
Solyc04g009960.3.1	1886	894.522466654666	396.33477179404	-1.17439817179548	0.00175007527696355	Down	0.000411882186474873	NA	GO:0004793//threonine aldolase activity;GO:0016832//aldehyde-lyase activity;GO:0048037//cofactor binding	GO:0019752//carboxylic acid metabolic process;GO:0006567//threonine catabolic process	K01620//threonine aldolase [EC:4.1.2.48]	gi|723689541|ref|XP_010319280.1|//PREDICTED: probable low-specificity L-threonine aldolase 1 isoform X1 [Solanum lycopersicum];gi|697154590|ref|XP_009631531.1|//PREDICTED: probable low-specificity L-threonine aldolase 1 [Nicotiana tomentosiformis]
Solyc08g066760.3.1	3770	151.71280960038	1084.69545896298	2.83787523865905	0.000135588329946925	Up	2.45067769461995e-05	NA	NA	NA	K15502//serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A	gi|460399293|ref|XP_004245176.1|//PREDICTED: ankyrin repeat-containing protein At5g02620-like [Solanum lycopersicum]
Solyc02g080990.2.1	2223	1538.00239533315	373.150112448442	-2.04322972420884	6.84009179925967e-13	Down	2.97284443042224e-14	GO:0044424//intracellular part	GO:0004823//leucine-tRNA ligase activity;GO:0005524//ATP binding;GO:0002161//aminoacyl-tRNA editing activity;GO:0032559//adenyl ribonucleotide binding;GO:0004812//aminoacyl-tRNA ligase activity	GO:0006418//tRNA aminoacylation for protein translation;GO:0006429//leucyl-tRNA aminoacylation;GO:0006450//regulation of translational fidelity	K01869//leucyl-tRNA synthetase [EC:6.1.1.4]	gi|747096149|ref|XP_011095981.1|//PREDICTED: putative leucine--tRNA ligase, mitochondrial isoform X1 [Sesamum indicum];gi|723673763|ref|XP_010316571.1|//PREDICTED: putative leucine--tRNA ligase, mitochondrial isoform X1 [Solanum lycopersicum];gi|460373773|ref|XP_004232688.1|//PREDICTED: putative leucine--tRNA ligase, mitochondrial isoform X2 [Solanum lycopersicum];gi|565362840|ref|XP_006348152.1|//PREDICTED: leucine--tRNA ligase, chloroplastic/mitochondrial [Solanum tuberosum]
Solyc05g013480.3.1	1243	3260.43210518168	822.52652829326	-1.9869290627465	7.50015843919542e-06	Down	1.04277586768298e-06	NA	NA	NA	K14570//RNA exonuclease 1 [EC:3.1.-.-]	gi|460386890|ref|XP_004239127.1|//PREDICTED: uncharacterized protein LOC101267023 [Solanum lycopersicum]
Solyc00g048510.3.1	775	2.67238429879947	87.7465997293037	5.0371438278338	8.69219013274134e-09	Up	7.10849304876789e-10	NA	NA	NA	K12236//transcriptional repressor NF-X1	gi|460416070|ref|XP_004253374.1|//PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like isoform X1 [Solanum lycopersicum]
Solyc12g026420.1.1	954	236.08424379663	882.91310237931	1.90296969299586	2.80435848027897e-07	Up	2.95091098472772e-08	NA	NA	NA	NA	NA
Solyc12g089150.2.1	1680	493.355805027275	1884.41391706992	1.93341550252597	3.18877610459338e-09	Up	2.43306421876497e-10	GO:0044464//cell part	NA	GO:0016192//vesicle-mediated transport	K08498//syntaxin 6	gi|460414881|ref|XP_004252790.1|//PREDICTED: syntaxin-61 [Solanum lycopersicum]
Solyc08g076645.1.1	3326	618.622704197702	53.6575855714316	-3.52720573877154	1.19832745647292e-10	Down	7.29859498984924e-12	NA	GO:0016740//transferase activity	GO:0005992//trehalose biosynthetic process	K16055//trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12]	gi|758375779|gb|AJO70167.1|//alpha,alpha-trehalose-phosphate synthase 5 [Camellia sinensis]
Solyc11g011070.2.1	3183	1116.59914369704	4918.17200779882	2.13901083768002	1.06238613793316e-08	Up	8.81097792195201e-10	NA	NA	NA	K19613//leucine-rich repeat protein SHOC2	gi|723741767|ref|XP_010312672.1|//PREDICTED: uncharacterized protein LOC101255156 [Solanum lycopersicum];gi|16944811|emb|CAC82811.1|//resistance gene-like [Solanum tuberosum subsp. andigenum];gi|723741752|ref|XP_010312671.1|//PREDICTED: uncharacterized protein LOC101265700 [Solanum lycopersicum]
Solyc06g071590.3.1	1627	49.476825140111	15.2445789155108	-1.6984566266301	0.00416987101731126	Down	0.00109096185591575	NA	NA	NA	K05609//ubiquitin carboxyl-terminal hydrolase L3 [EC:3.4.19.12]	gi|460393123|ref|XP_004242161.1|//PREDICTED: uncharacterized protein LOC101254705 [Solanum lycopersicum]
Solyc04g007370.3.1	2206	986.949307855919	2067.3353664467	1.06672455271192	6.04679519626551e-05	Up	1.01042876341353e-05	NA	GO:0005515//protein binding	GO:0044267//cellular protein metabolic process	K03686//molecular chaperone DnaJ;K09517//DnaJ homolog subfamily B member 11	gi|460382490|ref|XP_004236972.1|//PREDICTED: chaperone protein dnaJ 15 [Solanum lycopersicum]
Solyc05g013170.2.1	823	305.315286200343	624.454655038939	1.0322969912353	0.000554972392568121	Up	0.00011576060492065	NA	NA	NA	K17046//protein DEK;K17782//mitochondrial intermembrane space import and assembly protein 40	gi|460386852|ref|XP_004239109.1|//PREDICTED: maintenance of telomere capping protein 1-like [Solanum lycopersicum]
Solyc01g079410.3.1	1333	855.051656564529	179.079840025123	-2.25540864614949	0.0047719616620814	Down	0.00126805258271128	NA	NA	NA	NA	gi|460367048|ref|XP_004229387.1|//PREDICTED: uncharacterized protein LOC101266754 [Solanum lycopersicum]
Solyc01g081160.3.1	1268	216.022057603927	8.86273111076106	-4.6072834769828	1.7841593329119e-10	Down	1.12324627750417e-11	NA	NA	NA	K01188//beta-glucosidase [EC:3.2.1.21]	gi|698487774|ref|XP_009790515.1|//PREDICTED: beta-glucosidase 11-like isoform X1 [Nicotiana sylvestris];gi|697177520|ref|XP_009597720.1|//PREDICTED: beta-glucosidase 11-like isoform X2 [Nicotiana tomentosiformis]
Solyc07g007250.3.1	542	1328.11783880906	353.492483013066	-1.90963171548041	0.0285359741261033	Down	0.00971656939175314	NA	GO:0004866//endopeptidase inhibitor activity	GO:0010466//negative regulation of peptidase activity	NA	gi|350535352|ref|NP_001233934.1|//metallocarboxypeptidase inhibitor precursor [Solanum lycopersicum]
Solyc08g079750.3.1	6859	1395.93249306884	174.545484131497	-2.99955423802794	1.69788290887741e-18	Down	3.65803012274916e-20	NA	GO:0003824//catalytic activity	NA	K14270//aminotransferase	gi|460400330|ref|XP_004245688.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g12460 [Solanum lycopersicum]
Solyc01g006790.2.1	731	94.4137554440645	8.1103507502605	-3.54116085230798	2.65817866066207e-06	Down	3.38769910351769e-07	NA	NA	NA	NA	gi|969997249|ref|XP_015066929.1|//PREDICTED: uncharacterized protein LOC107011793 [Solanum pennellii]
Solyc07g065230.1.1	591	646.183572871927	1535.55795592135	1.24874698405133	0.00208233235761526	Up	0.000499393409456411	NA	NA	NA	NA	gi|723718152|ref|XP_010324290.1|//PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101254920 [Solanum lycopersicum]
Solyc01g010060.2.1	702	182.293204364805	819.833463921129	2.16907009829811	0.00488556774256168	Up	0.00130242956965861	NA	NA	NA	NA	gi|460365061|ref|XP_004228424.1|//PREDICTED: uncharacterized protein LOC101261845 [Solanum lycopersicum]
Solyc12g056230.2.1	781	1525.06698070104	3113.25845897116	1.02955274557986	0.000104321592873394	Up	1.82955529472685e-05	NA	GO:0043169//cation binding;GO:0004601//peroxidase activity	GO:0008152//metabolic process;GO:0006950//response to stress	K00432//glutathione peroxidase [EC:1.11.1.9]	gi|460414473|ref|XP_004252595.1|//PREDICTED: probable glutathione peroxidase 8 [Solanum lycopersicum]
Solyc01g087710.2.1	903	118.389052611345	11.8846150726433	-3.31636859957955	0.000385536735794102	Down	7.71849488575415e-05	NA	NA	NA	K14457//2-acylglycerol O-acyltransferase 2 [EC:2.3.1.22]	gi|460367591|ref|XP_004229656.1|//PREDICTED: uncharacterized protein LOC101254731 [Solanum lycopersicum]
Solyc04g071990.3.1	4465	1232.35019345484	4372.3135416219	1.82698458053045	5.7722221558713e-05	Up	9.5830764433617e-06	NA	NA	NA	K12124//GIGANTEA	gi|460384263|ref|XP_004237832.1|//PREDICTED: protein GIGANTEA [Solanum lycopersicum]
Solyc03g081300.3.1	3755	1182.55596404158	371.753904353357	-1.66948866080587	3.24401715789459e-05	Down	5.13541777010738e-06	NA	NA	NA	K15032//mTERF domain-containing protein, mitochondrial	gi|460378527|ref|XP_004235022.1|//PREDICTED: uncharacterized protein LOC101249713 [Solanum lycopersicum]
Solyc08g080470.3.1	1804	327.045171877993	2079.85699019705	2.66892251147557	2.66610108359418e-26	Up	2.68319402329815e-28	NA	NA	NA	NA	gi|460400237|ref|XP_004245642.1|//PREDICTED: protein IQ-DOMAIN 14 [Solanum lycopersicum]
Solyc11g070180.1.1	915	18.2508661792128	57.4293376967612	1.65382298857535	0.00509512359060693	Up	0.00136304241873363	NA	NA	NA	NA	gi|723746025|ref|XP_010313450.1|//PREDICTED: uncharacterized protein LOC104644780 [Solanum lycopersicum]
Solyc02g062040.3.1	1448	183.954184676353	773.133357005049	2.07137078885966	9.77274714714375e-08	Up	9.50391281754065e-09	NA	GO:0046872//metal ion binding	NA	K19041//E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27]	gi|460375539|ref|XP_004233563.1|//PREDICTED: NEP1-interacting protein-like 1 [Solanum lycopersicum]
Solyc06g054313.1.1	1856	35.3366227251111	10.1615658708897	-1.79804142703465	0.0463536271734561	Down	0.0171294863499942	NA	NA	NA	NA	NA
Solyc04g025650.3.1	1617	127.528193185875	4717.21827856136	5.20904822982311	1.61770433655565e-41	Up	4.4621336255076e-44	NA	NA	NA	K00480//salicylate hydroxylase [EC:1.14.13.1];K09838//zeaxanthin epoxidase [EC:1.14.13.90]	gi|460383070|ref|XP_004237255.1|//PREDICTED: zeaxanthin epoxidase, chloroplastic [Solanum lycopersicum]
Solyc01g080300.3.1	3941	1321.02703765153	314.422866680901	-2.07088194693843	1.28236604535873e-11	Down	6.71105534398262e-13	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial;K17710//pentatricopeptide repeat domain-containing protein 1;K15200//general transcription factor 3C polypeptide 2;K14498//serine/threonine-protein kinase SRK2 [EC:2.7.11.1]	gi|460367200|ref|XP_004229463.1|//PREDICTED: protein ABCI12, chloroplastic isoform X1 [Solanum lycopersicum];gi|723658894|ref|XP_010322805.1|//PREDICTED: protein ABCI12, chloroplastic isoform X2 [Solanum lycopersicum];gi|460367202|ref|XP_004229464.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g18950 [Solanum lycopersicum]
Solyc12g097030.2.1	2964	2120.89453701167	601.407425684691	-1.81825829726834	1.4299391474488e-10	Down	8.83185167482726e-12	NA	GO:0070011//peptidase activity, acting on L-amino acid peptides	GO:0019538//protein metabolic process	K03797	gi|970068889|ref|XP_015061574.1|//PREDICTED: carboxyl-terminal-processing peptidase 2, chloroplastic [Solanum pennellii];gi|460415334|ref|XP_004253014.1|//PREDICTED: carboxyl-terminal-processing peptidase 2, chloroplastic [Solanum lycopersicum]
Solyc09g007700.3.1	1905	2587.36362070503	827.027432308733	-1.64547573135427	3.88499618496135e-08	Down	3.51456901032548e-09	NA	NA	NA	K10604//E3 ubiquitin-protein ligase MGRN1 [EC:2.3.2.27]	gi|460402325|ref|XP_004246663.1|//PREDICTED: probable E3 ubiquitin-protein ligase LOG2 [Solanum lycopersicum]
Solyc04g072220.3.1	2157	1174.62850513939	3027.83839101843	1.36608365065171	0.00633947981748796	Up	0.00175004426451155	NA	NA	NA	K12581//CCR4-NOT transcription complex subunit 7/8;K13126//polyadenylate-binding protein;K01054//acylglycerol lipase [EC:3.1.1.23]	gi|460384297|ref|XP_004237849.1|//PREDICTED: uncharacterized protein LOC101260636 [Solanum lycopersicum]
Solyc02g090100.1.1	489	3888.05331401314	300.743429614056	-3.69244287760696	2.49262014280364e-26	Down	2.49001863080131e-28	NA	NA	NA	NA	gi|460372514|ref|XP_004232074.1|//PREDICTED: uncharacterized protein LOC101257421 [Solanum lycopersicum]
Solyc06g060300.1.1	318	0.402287926504618	7.66251637707582	4.2515179068207	0.00764485343456295	Up	0.00216197640554753	NA	NA	NA	K13600//chlorophyllide a oxygenase [EC:1.14.13.122]	gi|460392859|ref|XP_004242030.1|//PREDICTED: uncharacterized protein LOC101261721 [Solanum lycopersicum]
Solyc02g090810.3.1	849	8.7572963168334	78.8581951424832	3.17070325796765	3.5466034075793e-05	Up	5.64749133635707e-06	NA	NA	NA	K13448//calcium-binding protein CML	gi|460372433|ref|XP_004232035.1|//PREDICTED: caltractin [Solanum lycopersicum]
Solyc01g095670.3.1	2015	4556.9466706426	763.794859835817	-2.57681037088743	4.55137477742337e-15	Down	1.44372295198572e-16	NA	NA	NA	K17525//chitinase domain-containing protein 1	gi|723661491|ref|XP_010326928.1|//PREDICTED: rhodanese-like domain-containing protein 4, chloroplastic [Solanum lycopersicum]
Solyc06g007440.3.1	1274	523.137217434505	1144.05098460242	1.12889003110447	0.0497000285297449	Up	0.0185976810202068	NA	GO:0004674//protein serine/threonine kinase activity;GO:0032559//adenyl ribonucleotide binding	GO:0006464//cellular protein modification process;GO:0023052//signaling	K12761//carbon catabolite-derepressing protein kinase [EC:2.7.11.1]	gi|460389570|ref|XP_004240424.1|//PREDICTED: CBL-interacting serine/threonine-protein kinase 11-like [Solanum lycopersicum]
Solyc00g322635.1.1	846	98.3101030907604	14.516677075271	-2.75962843392323	7.68088395190643e-05	Down	1.30610528509755e-05	NA	GO:0005488//binding	NA	NA	gi|723690248|ref|XP_010319391.1|//PREDICTED: kirola-like [Solanum lycopersicum]
Solyc06g075090.3.1	1576	982.493038299231	474.624701591007	-1.04965999804556	0.00924720763052324	Down	0.00267613389158277	GO:0005634//nucleus;GO:0005829//cytosol	GO:0016799//hydrolase activity, hydrolyzing N-glycosyl compounds	GO:0009691//cytokinin biosynthetic process	K06966//uncharacterized protein	gi|970032704|ref|XP_015077658.1|//PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1-like [Solanum pennellii];gi|384081616|ref|NP_001244912.1|//cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG8 [Solanum lycopersicum]
Solyc05g007910.3.1	900	291.434510360743	87.0806887362173	-1.74274700175197	0.0019401127589872	Down	0.000462176108643476	GO:0030529//intracellular ribonucleoprotein complex	GO:0005198//structural molecule activity	GO:0010467//gene expression	K02881//large subunit ribosomal protein L18	gi|460386278|ref|XP_004238826.1|//PREDICTED: 50S ribosomal protein L18, chloroplastic [Solanum lycopersicum]
Solyc05g008595.1.1	1410	617.545588533431	1501.53356414353	1.28181917559879	2.04044152278543e-05	Up	3.10234120003048e-06	NA	NA	NA	NA	gi|460386386|ref|XP_004238879.1|//PREDICTED: uncharacterized protein LOC101265436 [Solanum lycopersicum]
Solyc06g074960.3.1	7100	692.990184722716	2907.62764795666	2.06893570516273	6.39235764641397e-14	Up	2.40892857481904e-15	GO:0044464//cell part;GO:0016021//integral component of membrane;GO:0005886//plasma membrane	GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity;GO:0042626//ATPase activity, coupled to transmembrane movement of substances;GO:0016887//ATPase activity	GO:0055085//transmembrane transport;GO:0009207//purine ribonucleoside triphosphate catabolic process	K00902//dolichol kinase [EC:2.7.1.108]	gi|565360892|ref|XP_006347198.1|//PREDICTED: dolichol kinase EVAN [Solanum tuberosum];gi|702272905|ref|XP_010043796.1|//PREDICTED: ABC transporter G family member 3 [Eucalyptus grandis];gi|697101053|ref|XP_009594129.1|//PREDICTED: ABC transporter G family member 3-like [Nicotiana tomentosiformis];gi|723707457|ref|XP_010322409.1|//PREDICTED: ABC transporter G family member 3-like isoform X2 [Solanum lycopersicum]
Solyc03g031980.3.1	2201	452.52230703843	3817.45685731947	3.07655103605451	6.91798093785756e-10	Up	4.78338103463760e-11	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460377436|ref|XP_004234499.1|//PREDICTED: probable L-type lectin-domain containing receptor kinase S.5 [Solanum lycopersicum]
Solyc01g105280.3.1	1066	519.399115903937	2693.09685978872	2.37435065522603	1.82270552419323e-05	Up	2.73392240545459e-06	NA	NA	NA	K17506//protein phosphatase 1L [EC:3.1.3.16]	gi|1001184329|ref|NP_001307427.1|//probable protein phosphatase 2C 10 [Solanum lycopersicum]
Solyc02g087810.3.1	943	33.1505106588153	94.0873127408375	1.50496910085891	0.00577234970217575	Up	0.00157433587188087	NA	NA	NA	K01785//aldose 1-epimerase [EC:5.1.3.3]	gi|970005048|ref|XP_015063354.1|//PREDICTED: aldose 1-epimerase-like [Solanum pennellii]
Solyc02g089650.3.1	2863	316.685244434813	82.5620328182946	-1.93949925037732	0.000885723556596622	Down	0.000194523751135653	NA	NA	NA	NA	gi|460372583|ref|XP_004232108.1|//PREDICTED: uncharacterized protein LOC101267572 [Solanum lycopersicum]
Solyc00g100880.3.1	1201	1.73740647799986	131.021291249775	6.23672213992164	1.69080092207627e-10	Up	1.05986483239954e-11	NA	NA	NA	K03239//translation initiation factor eIF-2B subunit alpha	gi|723754580|ref|XP_004253430.2|//PREDICTED: protein LURP-one-related 11-like [Solanum lycopersicum]
Solyc10g076510.2.1	2318	558.036768241085	6943.809926886	3.6372953699862	1.45457457512772e-14	Up	5.00979166325487e-16	NA	NA	NA	K01568//pyruvate decarboxylase [EC:4.1.1.1]	gi|460407254|ref|XP_004249069.1|//PREDICTED: pyruvate decarboxylase 1-like [Solanum lycopersicum]
Solyc04g009120.2.1	2232	4.65733378311248	20.0157313578947	2.10355814509348	0.0107381558181353	Up	0.00316685138038938	NA	NA	NA	K13457//disease resistance protein RPM1	gi|302594433|gb|ADL59406.1|//SNKR2GH5 protein [Solanum schenckii]
Solyc11g066110.2.1	1757	12944.7921203339	2901.80528643734	-2.15734917554735	5.4976221376269e-08	Down	5.11073118057309e-09	GO:0031224//intrinsic component of membrane	NA	GO:0034613//cellular protein localization	K03217//YidC/Oxa1 family membrane protein insertase	gi|460411127|ref|XP_004250966.1|//PREDICTED: inner membrane protein PPF-1, chloroplastic isoform X1 [Solanum lycopersicum]
Solyc03g078200.2.1	1584	4.68567602047191	0.356275136152952	-3.71719349723581	0.0268450652000946	Down	0.00906676367146479	NA	GO:0070011//peptidase activity, acting on L-amino acid peptides	GO:0008152//metabolic process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13199//plasminogen activator inhibitor 1 RNA-binding protein	gi|460378772|ref|XP_004235142.1|//PREDICTED: subtilisin-like protease SBT3.5 [Solanum lycopersicum]
Solyc05g018500.3.1	2781	608.971661982066	1935.57855241659	1.6683178582057	7.18780530989231e-06	Up	9.93989775596409e-07	NA	NA	NA	NA	gi|460387208|ref|XP_004239278.1|//PREDICTED: protein OBERON 3-like [Solanum lycopersicum]
Solyc09g005570.3.1	1622	16.3303809720987	207.590548366193	3.66811040594065	3.76090168667344e-08	Up	3.39249369380861e-09	NA	NA	NA	NA	gi|460402508|ref|XP_004246754.1|//PREDICTED: uncharacterized protein LOC101249483 [Solanum lycopersicum]
Solyc01g010290.3.1	1321	450.909420516683	1159.35940763855	1.36241832232581	0.000411849940611509	Up	8.31130005393883e-05	NA	NA	NA	NA	gi|723654815|ref|XP_010324067.1|//PREDICTED: ureide permease 1-like isoform X1 [Solanum lycopersicum]
Solyc07g063940.2.1	2278	1640.54674271177	26407.145998034	4.00867978290543	3.72750844018898e-51	Up	4.39056277805345e-54	NA	NA	NA	K14494//DELLA protein	gi|807201051|ref|NP_001293105.1|//GRAS2 protein [Solanum lycopersicum]
Solyc03g006715.1.1	1209	20.8827375335669	2.11099153642873	-3.30631814863847	0.049154644876857	Down	0.0183386327930692	NA	NA	NA	NA	NA
Solyc05g005640.3.1	4999	764.771319843533	274.384399427303	-1.47882996388288	8.52618454152925e-05	Down	1.46728137616415e-05	NA	NA	NA	K00278//L-aspartate oxidase [EC:1.4.3.16];K10896//fanconi anemia group M protein;K11446//histone demethylase JARID1 [EC:1.14.11.-];K11643//chromodomain-helicase-DNA-binding protein 4 [EC:3.6.4.12];K13196//zinc finger protein ubi-d4	gi|723696903|ref|XP_010320593.1|//PREDICTED: methyl-CpG-binding domain-containing protein 9 isoform X2 [Solanum lycopersicum]
Solyc01g112160.3.1	1778	1199.69980984825	195.059011680499	-2.62069090112884	1.8729926360676e-12	Down	8.691948083734e-14	NA	NA	NA	K19998//sec1 family domain-containing protein 1	gi|460370503|ref|XP_004231092.1|//PREDICTED: metal-independent phosphoserine phosphatase [Solanum lycopersicum]
Solyc07g064960.2.1	4591	76.8497837325196	8.00093372637798	-3.26380091936042	7.97906018447721e-08	Down	7.66439469785216e-09	GO:0031224//intrinsic component of membrane	GO:0070567//cytidylyltransferase activity	NA	K00981//phosphatidate cytidylyltransferase [EC:2.7.7.41]	gi|723718227|ref|XP_010324302.1|//PREDICTED: LOW QUALITY PROTEIN: phosphatidate cytidylyltransferase [Solanum lycopersicum]
Solyc01g108540.3.1	1175	310.044566474419	102.904001263133	-1.59117652621014	0.0244152104509722	Down	0.0081195954839561	NA	NA	NA	K13258//2-hydroxyisoflavanone dehydratase [EC:4.2.1.105];K20506//tuliposide A-converting enzyme [EC:4.2.99.22]	gi|460369935|ref|XP_004230812.1|//PREDICTED: 2-hydroxyisoflavanone dehydratase-like [Solanum lycopersicum]
Solyc03g006400.3.1	2444	160.742580126035	1133.70047569224	2.8182154803444	5.27310636610962e-16	Up	1.51148754865748e-17	NA	NA	NA	K04424//sterile alpha motif and leucine zipper containing kinase AZK [EC:2.7.11.25];K04427//mitogen-activated protein kinase kinase kinase 7 [EC:2.7.11.25];K17535//serine/threonine-protein kinase TNNI3K [EC:2.7.11.1];K04365//B-Raf proto-oncogene serine/threonine-protein kinase [EC:2.7.11.1]	gi|460376660|ref|XP_004234115.1|//PREDICTED: serine/threonine-protein kinase HT1-like [Solanum lycopersicum]
Solyc04g080630.3.1	614	8414.81126206289	2118.19650445137	-1.99009447942207	1.00684951886049e-05	Down	1.4328878272735e-06	GO:0030529//intracellular ribonucleoprotein complex	GO:0005198//structural molecule activity	GO:0010467//gene expression	K02909//large subunit ribosomal protein L31	gi|460385211|ref|XP_004238298.1|//PREDICTED: 50S ribosomal protein L31, chloroplastic [Solanum lycopersicum]
Solyc01g058320.3.1	4174	700.906918906174	317.450997339932	-1.14268895524194	0.00137224990286991	Down	0.00031446967358149	NA	NA	NA	NA	gi|460366292|ref|XP_004229022.1|//PREDICTED: uncharacterized protein LOC101267838 [Solanum lycopersicum]
Solyc03g118040.3.1	2083	3802.80563831363	36766.9128147718	3.27327193400916	2.90840258911084e-22	Up	4.29300516358988e-24	GO:0043231//intracellular membrane-bounded organelle	GO:0046872//metal ion binding;GO:0005515//protein binding	GO:0044267//cellular protein metabolic process	K08054//calnexin	gi|350539281|ref|NP_001234129.1|//calnexin-like protein precursor [Solanum lycopersicum]
Solyc07g055630.3.1	610	17.2972438884497	245.694016004662	3.82824863573106	1.94384728531675e-09	Up	1.44042358849325e-10	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723714823|ref|XP_010323669.1|//PREDICTED: LOW QUALITY PROTEIN: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Solanum lycopersicum]
Solyc11g017090.2.1	2308	0.696444512236554	6.42460425124207	3.2055272697698	0.0332783798967699	Up	0.0116166701853754	NA	NA	NA	K12471//epsin;K12448//UDP-arabinose 4-epimerase [EC:5.1.3.5];K04460//serine/threonine-protein phosphatase 5 [EC:3.1.3.16]	gi|723742619|ref|XP_004250585.2|//PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Solanum lycopersicum]
Solyc07g022900.3.1	1799	4588.86464834198	1829.6837492885	-1.32654294591182	2.23419386373124e-06	Down	2.79982099666931e-07	NA	NA	NA	K08911//light-harvesting complex I chlorophyll a/b binding protein 5	gi|460394737|ref|XP_004242951.1|//PREDICTED: chlorophyll a-b binding protein 4, chloroplastic [Solanum lycopersicum]
Solyc09g098080.3.1	1485	64.3233025954085	403.797676275711	2.6502192216412	0.000917804444223508	Up	0.000202424664398036	NA	NA	NA	K12938//anthocyanidin 5,3-O-glucosyltransferase [EC:2.4.1.-];K08237//hydroquinone glucosyltransferase [EC:2.4.1.218]	gi|460405097|ref|XP_004248013.1|//PREDICTED: anthocyanidin 3-O-glucosyltransferase 2-like [Solanum lycopersicum]
Solyc01g005450.3.1	1187	601.7904314871	123.240206074658	-2.28778816801706	0.000109842495170825	Down	1.93784303579661e-05	NA	NA	NA	NA	gi|723656060|ref|XP_004228734.2|//PREDICTED: F-box protein SKIP28 [Solanum lycopersicum]
Solyc08g045850.3.1	2655	1797.20448931407	640.655318628428	-1.48813428983767	0.000974147436154086	Down	0.00021608585778116	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial	gi|460398854|ref|XP_004244963.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g42310, mitochondrial [Solanum lycopersicum]
Solyc10g079140.2.1	1650	207.859108283721	595.915810665965	1.51950255759362	0.000147011628311697	Up	2.67797013403632e-05	NA	GO:0004385//guanylate kinase activity	GO:0046710//GDP metabolic process;GO:0046037//GMP metabolic process	K00942//guanylate kinase [EC:2.7.4.8]	gi|460407520|ref|XP_004249200.1|//PREDICTED: guanylate kinase 2-like [Solanum lycopersicum]
Solyc09g089790.3.1	1410	17.5288203071292	185.901635394355	3.40673865100636	7.84972314407342e-06	Up	1.09635129792915e-06	NA	NA	NA	K06892//feruloyl-CoA ortho-hydroxylase [EC:1.14.11.-];K13229//2,4-dihydroxy-1,4-benzoxazin-3-one-glucoside dioxygenase [EC:1.14.20.2]	gi|460404485|ref|XP_004247712.1|//PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like [Solanum lycopersicum]
Solyc10g078160.2.1	1846	508.511474772314	178.453313767076	-1.51073363787646	0.00023542508120369	Down	4.48946889607157e-05	NA	NA	NA	NA	gi|460407337|ref|XP_004249109.1|//PREDICTED: vacuolar protein-sorting protein bro1-like [Solanum lycopersicum]
Solyc09g090470.3.1	2011	167.95344366951	2128.54281785053	3.66373283012538	1.17928736095978e-23	Up	1.52092376208471e-25	GO:0044464//cell part	NA	GO:0015833//peptide transport	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460404576|ref|XP_004247757.1|//PREDICTED: protein NRT1/ PTR FAMILY 5.2-like [Solanum lycopersicum]
Solyc07g056390.3.1	2099	241.06399196735	3440.60849298305	3.8351756621042	1.18568638864532e-36	Up	5.07509339086333e-39	NA	NA	NA	K10950//ERO1-like protein alpha [EC:1.8.4.-]	gi|460395256|ref|XP_004243200.1|//PREDICTED: endoplasmic reticulum oxidoreductin-1 [Solanum lycopersicum]
Solyc09g097960.3.1	1062	336.656207674497	6196.36255289696	4.20207358720753	1.16103016162414e-11	Up	6.04144217096802e-13	NA	NA	NA	K05275//pyridoxine 4-dehydrogenase [EC:1.1.1.65]	gi|723733472|ref|XP_010326947.1|//PREDICTED: auxin-induced protein PCNT115-like isoform X1 [Solanum lycopersicum]
Solyc04g049150.2.1	1049	132.69525487201	437.925959966862	1.72257019290531	2.35431323031539e-06	Up	2.96526927286257e-07	NA	NA	NA	K17604//zinc finger SWIM domain-containing protein 3	gi|723692873|ref|XP_010319866.1|//PREDICTED: uncharacterized protein LOC104647002 [Solanum lycopersicum];gi|971538789|ref|XP_015159828.1|//PREDICTED: uncharacterized protein LOC102600303 [Solanum tuberosum]
BGI_novel_G000306	1041	77.8526062003029	25.6169116564809	-1.60364877927703	0.0493526663263061	Down	0.0184253878755137	NA	NA	NA	NA	gi|698493519|ref|XP_009793033.1|//PREDICTED: uncharacterized protein LOC104239959 [Nicotiana sylvestris]
Solyc01g059860.3.1	3386	958.770561875462	335.0797762585	-1.51668099780472	5.994222948859e-08	Down	5.62377335704417e-09	NA	GO:0004674//protein serine/threonine kinase activity;GO:0004871//signal transducer activity	GO:0044260//cellular macromolecule metabolic process;GO:0044238//primary metabolic process	K04424//sterile alpha motif and leucine zipper containing kinase AZK [EC:2.7.11.25]	gi|460366270|ref|XP_004229011.1|//PREDICTED: probable serine/threonine-protein kinase DDB_G0282963 [Solanum lycopersicum]
Solyc12g008650.2.1	1266	65.5524893393398	452.0278521027	2.78568919574958	0.000398668279087937	Up	8.01408241062042e-05	GO:0044424//intracellular part	GO:0016701//oxidoreductase activity, acting on single donors with incorporation of molecular oxygen;GO:0046914//transition metal ion binding	GO:0006020//inositol metabolic process	K00469//inositol oxygenase [EC:1.13.99.1]	gi|350538319|ref|NP_001234593.1|//myo-inositol oxygenase [Solanum lycopersicum]
Solyc02g069580.3.1	4989	1030.70519994523	6162.13092461567	2.57979757991967	7.45843052144509e-10	Up	5.20433201734949e-11	NA	GO:0003978//UDP-glucose 4-epimerase activity	GO:0006012//galactose metabolic process	K12448//UDP-arabinose 4-epimerase [EC:5.1.3.5]	gi|460374784|ref|XP_004233189.1|//PREDICTED: UDP-arabinose 4-epimerase 1 [Solanum lycopersicum]
Solyc03g033640.3.1	2551	247.634766918531	591.790007591833	1.25687145943525	0.00298771177531884	Up	0.000748821156151926	NA	NA	NA	NA	gi|460377528|ref|XP_004234544.1|//PREDICTED: transmembrane and coiled-coil domain-containing protein 4 isoform X1 [Solanum lycopersicum];gi|723680202|ref|XP_010317701.1|//PREDICTED: transmembrane and coiled-coil domain-containing protein 4 isoform X3 [Solanum lycopersicum]
Solyc02g080230.3.1	933	186.706248027018	12.3513874908755	-3.91802518649553	1.00627383333559e-08	Down	8.29684553204983e-10	NA	NA	NA	NA	gi|460373870|ref|XP_004232736.1|//PREDICTED: CRIB domain-containing protein RIC10 [Solanum lycopersicum]
Solyc07g006610.3.1	2725	0.585242784861979	16.0974062890768	4.78164919788822	0.00208200439551479	Up	0.000499237150601858	NA	GO:0004674//protein serine/threonine kinase activity;GO:0032559//adenyl ribonucleotide binding	GO:0006464//cellular protein modification process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460394153|ref|XP_004242669.1|//PREDICTED: PTI1-like tyrosine-protein kinase At3g15890 [Solanum lycopersicum]
Solyc06g084410.3.1	1581	291.918360316811	1383.81591449529	2.24501518003154	6.83410790776796e-13	Up	2.96769632941318e-14	NA	GO:0060089//molecular transducer activity;GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	GO:0007165//signal transduction;GO:0008152//metabolic process	K14490//histidine-containing phosphotransfer peotein	gi|723711117|ref|XP_010323030.1|//PREDICTED: histidine-containing phosphotransfer protein 1-like [Solanum lycopersicum]
Solyc06g051540.3.1	2352	215.127228217566	815.222447400842	1.92200364179547	1.4313304931727e-05	Up	2.09887213364448e-06	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460390648|ref|XP_004240940.1|//PREDICTED: putative serine/threonine-protein kinase-like protein CCR3 [Solanum lycopersicum]
Solyc01g105545.1.1	696	558.740418193219	67.5210842755753	-3.04876820920427	7.43986549629645e-05	Down	1.26123856706263e-05	GO:0044464//cell part	NA	GO:0030001//metal ion transport	K03319//divalent anion:Na+ symporter, DASS family	gi|723664572|ref|XP_010315125.1|//PREDICTED: LOW QUALITY PROTEIN: dicarboxylate transporter 2.1, chloroplastic-like [Solanum lycopersicum]
Solyc07g047980.2.1	2010	1370.66239229796	3656.86597713164	1.4157344885585	0.000168207637003243	Up	3.11423636870101e-05	NA	NA	NA	K13118//protein DGCR14	gi|723716066|ref|XP_010323878.1|//PREDICTED: protein DGCR14 [Solanum lycopersicum]
Solyc04g016270.2.1	446	338.538733815859	2006.94571996882	2.5676087840589	2.38045260922446e-07	Up	2.47912054203561e-08	NA	NA	NA	NA	NA
Solyc02g076810.3.1	1134	288.320590425877	858.403155775389	1.57398150929791	2.37271678035314e-07	Up	2.46841081480752e-08	NA	NA	NA	K09903//uridylate kinase [EC:2.7.4.22]	gi|460374525|ref|XP_004233061.1|//PREDICTED: trihelix transcription factor ASIL2 [Solanum lycopersicum]
Solyc11g011330.2.1	1202	13.2344597510706	192.851005266131	3.86511545791717	7.81214209070969e-12	Up	3.93984950377598e-13	NA	GO:0046914//transition metal ion binding;GO:0003824//catalytic activity	GO:0008152//metabolic process	K00083//cinnamyl-alcohol dehydrogenase [EC:1.1.1.195]	gi|460409530|ref|XP_004250191.1|//PREDICTED: 8-hydroxygeraniol dehydrogenase-like [Solanum lycopersicum]
Solyc01g104010.2.1	1076	62.0444875390441	202.999861646068	1.71010380197975	0.000322588454541215	Up	6.35124577637802e-05	NA	NA	NA	K18327//RNA exonuclease 4 [EC:3.1.-.-]	gi|460369262|ref|XP_004230482.1|//PREDICTED: uncharacterized protein LOC101250842 [Solanum lycopersicum]
Solyc01g066430.3.1	903	1070.02212187624	8168.11612264926	2.93236275301208	1.34353660379027e-05	Up	1.95661156664998e-06	NA	NA	NA	K19038//E3 ubiquitin-protein ligase ATL41 [EC:2.3.2.27];K19041//E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27]	gi|460366788|ref|XP_004229261.1|//PREDICTED: RING-H2 finger protein ATL2-like [Solanum lycopersicum]
Solyc09g089680.3.1	1838	42.6111971728184	276.864389111346	2.69987501302647	0.000132657808845056	Up	2.38782078020268e-05	NA	GO:0016701//oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	GO:0008152//metabolic process	K13525//transitional endoplasmic reticulum ATPase;K06892//feruloyl-CoA ortho-hydroxylase [EC:1.14.11.-];K13229//2,4-dihydroxy-1,4-benzoxazin-3-one-glucoside dioxygenase [EC:1.14.20.2]	gi|460404479|ref|XP_004247710.1|//PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog [Solanum lycopersicum]
Solyc08g007640.1.1	945	168.014711733397	69.9418178931715	-1.26436036459676	0.0143017028691977	Down	0.00437825725602806	NA	NA	NA	K19613//leucine-rich repeat protein SHOC2	gi|723720030|ref|XP_010324607.1|//PREDICTED: LOW QUALITY PROTEIN: putative disease resistance protein RGA3 [Solanum lycopersicum]
Solyc10g076690.2.1	1158	426.754399950143	856.015677598407	1.00423119137889	7.6996721564313e-05	Up	1.3095871496122e-05	NA	GO:0046872//metal ion binding	NA	K11446//histone demethylase JARID1 [EC:1.14.11.-]	gi|460407267|ref|XP_004249075.1|//PREDICTED: PHD finger protein ALFIN-LIKE 2-like [Solanum lycopersicum]
Solyc08g082560.3.1	2570	2759.87335866282	578.573577404858	-2.254029723936	1.84199749746936e-25	Down	1.94993025675152e-27	NA	NA	NA	NA	gi|723723942|ref|XP_010325351.1|//PREDICTED: F-box protein SKIP8 [Solanum lycopersicum]
Solyc08g080290.3.1	1222	65.3223622107312	689.473055243081	3.39984530379303	4.11175383112361e-10	Up	2.7403518152859e-11	NA	NA	NA	K09286//EREBP-like factor	gi|460400257|ref|XP_004245652.1|//PREDICTED: ethylene-responsive transcription factor ERF027-like [Solanum lycopersicum]
Solyc04g015680.3.1	3863	2462.83018046507	5187.52684349013	1.07472974365563	0.00238346556227184	Up	0.000581029699465402	GO:0005739//mitochondrion	GO:0004175//endopeptidase activity;GO:0004222//metalloendopeptidase activity;GO:0046914//transition metal ion binding;GO:0008270//zinc ion binding	GO:0051603//proteolysis involved in cellular protein catabolic process;GO:0019538//protein metabolic process;GO:0016485//protein processing;GO:0043171//peptide catabolic process	K01408//insulysin [EC:3.4.24.56]	gi|697140094|ref|XP_009624141.1|//PREDICTED: zinc-metallopeptidase, peroxisomal [Nicotiana tomentosiformis];gi|927261907|ref|NP_001233926.2|//insulin degrading enzyme [Solanum lycopersicum]
Solyc04g072920.3.1	2566	44.8986940414913	303.220775823691	2.75562321891586	4.68097645284798e-12	Up	2.294425240605e-13	NA	GO:0019203//carbohydrate phosphatase activity	GO:0005991//trehalose metabolic process	K01087//trehalose 6-phosphate phosphatase [EC:3.1.3.12]	gi|460384389|ref|XP_004237894.1|//PREDICTED: probable trehalose-phosphate phosphatase J [Solanum lycopersicum]
Solyc02g090890.3.1	2811	11999.8831397576	393.053921431283	-4.93214930267787	9.60287411641936e-23	Down	1.3637598920366e-24	GO:0009535//chloroplast thylakoid membrane;GO:0009941//chloroplast envelope;GO:0009534//chloroplast thylakoid;GO:0031969//chloroplast membrane	GO:0016709//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen;GO:0009540//zeaxanthin epoxidase [overall] activity;GO:0052663//antheraxanthin epoxidase activity;GO:0052662//zeaxanthin epoxidase activity;GO:0071949//FAD binding	GO:0016123//xanthophyll biosynthetic process;GO:0009414//response to water deprivation;GO:0050896//response to stimulus;GO:0044550//secondary metabolite biosynthetic process;GO:0009687//abscisic acid metabolic process;GO:0009408//response to heat;GO:0055114//oxidation-reduction process;GO:0009688//abscisic acid biosynthetic process	K09838//zeaxanthin epoxidase [EC:1.14.13.90]	gi|823270897|ref|NP_001296233.1|//zeaxanthin epoxidase, chloroplastic [Solanum lycopersicum]
Solyc06g048870.2.1	2116	1.88867114796398	44.2262000379016	4.54945786044056	2.86391137744597e-06	Up	3.67009367662861e-07	NA	NA	NA	K13425//WRKY transcription factor 22;K13459//disease resistance protein RPS2;K13424//WRKY transcription factor 33;K16225//probable WRKY transcription factor 52	gi|460390958|ref|XP_004241091.1|//PREDICTED: WRKY transcription factor 55 [Solanum lycopersicum]
Solyc07g025490.2.1	993	92.5973996217758	18.3682412816356	-2.3337581811764	0.00352277410786153	Down	0.000903410088791089	NA	NA	NA	K04711//dihydroceramidase [EC:3.5.1.-];K03320//ammonium transporter, Amt family	gi|697128957|ref|XP_009618533.1|//PREDICTED: alkaline ceramidase 3-like isoform X1 [Nicotiana tomentosiformis];gi|970051887|ref|XP_015087539.1|//PREDICTED: ammonium transporter 3 member 1-like [Solanum pennellii]
Solyc03g007210.3.1	2481	403.754468704674	4368.01642486695	3.43542814859457	5.49319088887e-16	Up	1.58071543395245e-17	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460376767|ref|XP_004234168.1|//PREDICTED: probable receptor-like protein kinase At1g67000 [Solanum lycopersicum]
Solyc03g115410.3.1	3909	521.709511977543	1962.17890391542	1.91113794452824	2.6087467064951e-10	Up	1.67932964146304e-11	NA	NA	NA	K02978//small subunit ribosomal protein S27e;K19613//leucine-rich repeat protein SHOC2	gi|460380554|ref|XP_004236020.1|//PREDICTED: putative F-box protein At3g25750 [Solanum lycopersicum];gi|970013899|ref|XP_015067930.1|//PREDICTED: putative F-box protein At5g55150 [Solanum pennellii]
Solyc03g026220.3.1	1903	3247.5479009603	16583.0808069612	2.35228934528072	5.5682495968777e-11	Up	3.23576156311776e-12	NA	NA	NA	K09555	gi|460377147|ref|XP_004234356.1|//PREDICTED: BAG family molecular chaperone regulator 1 [Solanum lycopersicum]
Solyc10g085310.1.1	642	125.46851691724	369.407212003702	1.55788663005202	0.0200684681962516	Up	0.00646158596538026	NA	NA	NA	K14496//abscisic acid receptor PYR/PYL family	gi|460408477|ref|XP_004249671.1|//PREDICTED: abscisic acid receptor PYL4 [Solanum lycopersicum]
Solyc08g067540.1.1	363	127.309793135246	8.66498149841027	-3.87700292173937	4.64960720794834e-08	Down	4.2617355465726e-09	NA	NA	NA	NA	gi|460399767|ref|XP_004245408.1|//PREDICTED: non-specific lipid-transfer protein 1-like [Solanum lycopersicum]
Solyc02g065080.3.1	2242	501.613504890667	248.359741389991	-1.01414485562614	0.00524040929484163	Down	0.00140835511464918	GO:0005829//cytosol	GO:0016791//phosphatase activity	GO:0016311//dephosphorylation	K15634//probable phosphoglycerate mutase [EC:5.4.2.12]	gi|723677304|ref|XP_010317163.1|//PREDICTED: phosphoglycerate mutase-like protein 4 isoform X2 [Solanum lycopersicum];gi|723677294|ref|XP_010317160.1|//PREDICTED: phosphoglycerate mutase-like protein 4 isoform X1 [Solanum lycopersicum]
Solyc04g075000.1.1	1491	52.1905208198059	145.783728469739	1.48196999934724	0.00366534091893626	Up	0.000944889585334843	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723694537|ref|XP_010320196.1|//PREDICTED: serine/threonine-protein kinase-like protein At3g51990 [Solanum lycopersicum]
Solyc08g077050.3.1	2590	1936.02340305122	767.506455481383	-1.33484560218838	4.1460838709446e-07	Down	4.51266024420689e-08	NA	GO:0043169//cation binding;GO:0051536//iron-sulfur cluster binding	GO:0006091//generation of precursor metabolites and energy	K02639//ferredoxin	gi|460400731|ref|XP_004245886.1|//PREDICTED: ferredoxin [Solanum lycopersicum]
Solyc09g009970.3.1	2685	279.873878906099	95.1816149941654	-1.55602200532138	0.0220003111839144	Down	0.00719512189979369	NA	NA	NA	K20642	gi|460401994|ref|XP_004246500.1|//PREDICTED: rho GTPase-activating protein 5-like [Solanum lycopersicum]
Solyc07g045100.1.1	1650	239.965468441241	1105.30389487859	2.20354436326484	0.00144078579990629	Up	0.000331947854078603	NA	GO:0008233//peptidase activity	NA	K00924;K02882//large subunit ribosomal protein L18Ae;K01381//saccharopepsin [EC:3.4.23.25]	gi|460396075|ref|XP_004243605.1|//PREDICTED: aspartic proteinase nepenthesin-2-like [Solanum lycopersicum]
Solyc01g100460.3.1	417	33.6639228373651	230.796231099445	2.77734445698637	7.39334392948797e-11	Up	4.37901576858371e-12	GO:0043231//intracellular membrane-bounded organelle	GO:0003677//DNA binding;GO:0005515//protein binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0006351//transcription, DNA-templated	K09060//plant G-box-binding factor	gi|350536489|ref|NP_001234505.1|//anaerobic basic leucine zipper protein [Solanum lycopersicum]
Solyc10g006540.3.1	4095	782.521187303035	2838.26090858391	1.85880549631905	3.67748215182146e-05	Up	5.87097661258809e-06	NA	NA	NA	K19984//exocyst complex component 5;K02184//formin 2	gi|723734681|ref|XP_004248308.2|//PREDICTED: formin-like protein 5 [Solanum lycopersicum]
Solyc05g018050.1.1	282	16.7259849664046	51.8500186066096	1.63225333539275	0.0378111543341769	Up	0.0134568697473804	NA	NA	NA	K11982//E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]	gi|723699648|ref|XP_010321051.1|//PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Solanum lycopersicum]
Solyc08g081495.1.1	2789	250.381470827636	1266.83922321454	2.33903373467691	1.00531176521587e-05	Up	1.42994993889361e-06	GO:0005634//nucleus	GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0004702//receptor signaling protein serine/threonine kinase activity;GO:0004707//MAP kinase activity	GO:0000165//MAPK cascade;GO:0006464//cellular protein modification process;GO:0080026//response to indolebutyric acid	K04371//mitogen-activated protein kinase 1/3 [EC:2.7.11.24];K04464;K20600//null	gi|902763240|ref|NP_001233897.2|//mitogen-activated protein kinase 7 [Solanum lycopersicum];gi|590678560|ref|XP_007040337.1|//MAP kinase 4 [Theobroma cacao]
Solyc03g005030.3.1	1338	857.768238378287	354.150502853365	-1.27622530579704	0.00102619108222483	Down	0.000228471721117075	NA	NA	NA	NA	gi|460376432|ref|XP_004234002.1|//PREDICTED: uncharacterized protein At3g27210 [Solanum lycopersicum]
Solyc01g009260.1.1	1416	33.0080803526832	4.98036038673102	-2.72849719147109	0.00448626007805338	Down	0.0011844408876119	NA	NA	NA	K20642;K09528//DnaJ homolog subfamily C member 8	gi|460365981|ref|XP_004228872.1|//PREDICTED: protein FAF-like, chloroplastic [Solanum lycopersicum]
Solyc12g095970.2.1	901	23.4523685357644	2.16033801468737	-3.44040466815202	0.000756189688440246	Down	0.000163143950972571	NA	NA	NA	K14496//abscisic acid receptor PYR/PYL family	gi|460415700|ref|XP_004253195.1|//PREDICTED: abscisic acid receptor PYL2-like [Solanum lycopersicum]
Solyc06g033980.2.1	1031	16.9015103513406	0.392715710616762	-5.42752304977043	0.000120722192493054	Down	2.15093216086476e-05	NA	NA	NA	K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1];K01184//polygalacturonase [EC:3.2.1.15];K03469//ribonuclease HI [EC:3.1.26.4];K20667	gi|923929203|ref|XP_013733415.1|//PREDICTED: uncharacterized protein LOC106437020 [Brassica napus]
Solyc02g065680.3.1	2268	1989.70353500736	538.415883507138	-1.88576060999394	4.03649931071666e-05	Down	6.48776838668937e-06	NA	NA	NA	K14207//solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2	gi|460375204|ref|XP_004233397.1|//PREDICTED: probable sodium-coupled neutral amino acid transporter 6 [Solanum lycopersicum];gi|698524507|ref|XP_009759063.1|//PREDICTED: probable sodium-coupled neutral amino acid transporter 6 [Nicotiana sylvestris]
Solyc05g026480.2.1	1641	82.4924884022358	9.83106128954361	-3.06884368357018	1.69823397037179e-06	Down	2.08639450065059e-07	NA	NA	NA	K04508//transducin (beta)-like 1;K16482//centriolar protein POC1;K14963//COMPASS component SWD3	gi|460387883|ref|XP_004239602.1|//PREDICTED: transcriptional corepressor LEUNIG-like isoform X2 [Solanum lycopersicum];gi|723700312|ref|XP_010321145.1|//PREDICTED: transcriptional corepressor LEUNIG-like isoform X3 [Solanum lycopersicum];gi|723700307|ref|XP_010321144.1|//PREDICTED: transcriptional corepressor LEUNIG-like isoform X1 [Solanum lycopersicum]
Solyc11g005720.1.1	696	305.691136962944	1229.79099001086	2.00826651289747	4.10568669315085e-05	Up	6.61274496835576e-06	NA	NA	NA	K20725	gi|460408923|ref|XP_004249890.1|//PREDICTED: protein MKS1 [Solanum lycopersicum]
Solyc04g079840.3.1	2235	262.856415637737	779.187493575201	1.56769557373592	1.07616930314991e-06	Up	1.27200419721498e-07	NA	NA	NA	NA	gi|723695605|ref|XP_010320368.1|//PREDICTED: protein DA1 isoform X1 [Solanum lycopersicum]
Solyc01g067560.3.1	3907	443.201283053132	1166.6767237703	1.39637089479399	1.2914838327285e-05	Up	1.87406685582676e-06	NA	NA	NA	K03164//DNA topoisomerase II [EC:5.99.1.3]	gi|723658011|ref|XP_010321117.1|//PREDICTED: protein ALWAYS EARLY 3 isoform X2 [Solanum lycopersicum];gi|723658014|ref|XP_010321119.1|//PREDICTED: protein ALWAYS EARLY 3 isoform X3 [Solanum lycopersicum]
Solyc10g080045.1.1	1790	14.3180668724628	0.713567833355419	-4.3266423306601	0.00814417531106351	Down	0.00231745319534288	NA	NA	NA	K14769//U3 small nucleolar RNA-associated protein 11	gi|723738425|ref|XP_004249256.2|//PREDICTED: uncharacterized protein LOC101253437 [Solanum lycopersicum]
Solyc07g065890.3.1	1849	484.925100941218	3477.76112319552	2.84232500342676	3.074524873043e-15	Up	9.59213254337629e-17	NA	GO:0005524//ATP binding;GO:0004849//uridine kinase activity;GO:0032559//adenyl ribonucleotide binding;GO:0019206//nucleoside kinase activity	GO:0016310//phosphorylation;GO:0006796//phosphate-containing compound metabolic process;GO:0044206//UMP salvage;GO:0044211//CTP salvage	K00876//uridine kinase [EC:2.7.1.48]	gi|460396926|ref|XP_004244021.1|//PREDICTED: uridine kinase-like protein 3 [Solanum lycopersicum];gi|731330395|ref|XP_010676109.1|//PREDICTED: uridine kinase-like protein 3 isoform X1 [Beta vulgaris subsp. vulgaris]
Solyc03g008010.3.1	2465	1312.49467882774	3673.7557271537	1.48494412919457	1.05727014322621e-06	Up	1.2492717884401e-07	NA	NA	NA	K08825//dual specificity tyrosine-phosphorylation-regulated kinase 1 [EC:2.7.12.1]	gi|460376886|ref|XP_004234227.1|//PREDICTED: desumoylating isopeptidase 2 [Solanum lycopersicum]
Solyc12g094620.2.1	2665	5054.5907061	20359.6460445068	2.01004629997125	0.00662421448942158	Up	0.00183941189779051	GO:0005777//peroxisome;GO:0009514//glyoxysome	GO:0020037//heme binding;GO:0046872//metal ion binding;GO:0004096//catalase activity;GO:0004601//peroxidase activity;GO:0005506//iron ion binding	GO:0006979//response to oxidative stress;GO:0042743//hydrogen peroxide metabolic process;GO:0098869//cellular oxidant detoxification;GO:0006950//response to stress;GO:0042744//hydrogen peroxide catabolic process;GO:0055114//oxidation-reduction process	K03781//catalase [EC:1.11.1.6]	gi|350537883|ref|NP_001234827.1|//catalase isozyme 1 [Solanum lycopersicum];gi|697100359|ref|XP_009590727.1|//PREDICTED: catalase isozyme 1 [Nicotiana tomentosiformis]
Solyc03g116870.3.1	1584	5357.00345978194	1228.23002578922	-2.12484545050134	9.52635248918863e-15	Down	3.17805482250776e-16	NA	NA	NA	NA	gi|460380397|ref|XP_004235943.1|//PREDICTED: uncharacterized protein LOC101247416 [Solanum lycopersicum];gi|970018881|ref|XP_015070623.1|//PREDICTED: photosynthetic NDH subunit of subcomplex B 1, chloroplastic [Solanum pennellii]
Solyc03g093130.3.1	1789	162.124615808416	817.955986594432	2.33492005957398	0.000335250517531554	Up	6.62678356370147e-05	GO:0030312//external encapsulating structure;GO:0005576//extracellular region	GO:0016758//transferase activity, transferring hexosyl groups;GO:0016798//hydrolase activity, acting on glycosyl bonds	GO:0044042//glucan metabolic process	K08235//xyloglucan:xyloglucosyl transferase [EC:2.4.1.207]	gi|350535843|ref|NP_001234472.1|//xyloglucan endotransglucosylase-hydrolase XTH3 precursor [Solanum lycopersicum]
Solyc01g109800.2.1	1195	64.7460494675568	20.1225523220726	-1.68597886170481	0.0289286831001458	Down	0.009870775499431	NA	NA	NA	NA	gi|723665897|ref|XP_010315310.1|//PREDICTED: uncharacterized protein LOC104645424 [Solanum lycopersicum]
Solyc08g068350.3.1	1605	237.000199546448	834.423868018769	1.81589215174452	1.95267543265235e-14	Up	6.85108649317253e-16	NA	NA	NA	K15029//translation initiation factor 3 subunit L	gi|460399479|ref|XP_004245268.1|//PREDICTED: uncharacterized protein LOC101260663 [Solanum lycopersicum]
Solyc08g007690.1.1	2217	16.3408043850127	0.966036802369325	-4.08025704109326	0.00563947571912462	Down	0.00153242053050613	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K08653//membrane-bound transcription factor site-1 protease [EC:3.4.21.112];K13199//plasminogen activator inhibitor 1 RNA-binding protein	gi|460398076|ref|XP_004244590.1|//PREDICTED: subtilisin-like protease [Solanum lycopersicum]
Solyc04g082970.3.1	3591	778.812489175454	3124.97923470319	2.00449867851548	0.000207248356640342	Up	3.91506885139873e-05	NA	NA	NA	K20495	gi|723696484|ref|XP_010320492.1|//PREDICTED: uncharacterized protein LOC101248099 [Solanum lycopersicum];gi|970024298|ref|XP_015073459.1|//PREDICTED: uncharacterized protein LOC107017731 isoform X2 [Solanum pennellii];gi|970024296|ref|XP_015073458.1|//PREDICTED: uncharacterized protein LOC107017731 isoform X1 [Solanum pennellii]
Solyc04g079860.1.1	1032	107.700494481538	1059.71604914999	3.29858096771714	7.7409851733497e-11	Up	4.59357700759383e-12	NA	GO:0016740//transferase activity	NA	K20893	gi|460385050|ref|XP_004238218.1|//PREDICTED: probable galacturonosyltransferase-like 1 [Solanum lycopersicum]
Solyc07g005070.1.1	1056	1.4147964879668	39.3636800162652	4.79819865310861	2.9523229395822e-07	Up	3.12812910593435e-08	NA	NA	NA	K06237//collagen, type IV, alpha;K12823//ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]	gi|970039677|ref|XP_015081175.1|//PREDICTED: collagen alpha chain-like [Solanum pennellii]
Solyc04g015460.3.1	2643	88.2707874241281	379.446331216204	2.10388787315426	9.94988573664632e-05	Up	1.73390753030992e-05	NA	GO:0005488//binding	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460382774|ref|XP_004237111.1|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At5g35370 [Solanum lycopersicum]
Solyc04g074350.3.1	3597	946.328206362594	152.364314935788	-2.63481557657559	0.000608166316592077	Down	0.000128352381263767	NA	GO:0016757//transferase activity, transferring glycosyl groups	NA	K13030//cyanohydrin beta-glucosyltransferase [EC:2.4.1.85]	gi|460384453|ref|XP_004237926.1|//PREDICTED: 7-deoxyloganetin glucosyltransferase-like [Solanum lycopersicum]
Solyc02g087480.3.1	2155	493.681587587063	1302.65590741499	1.39980330648075	6.96524501254674e-06	Up	9.61394896431362e-07	NA	NA	NA	NA	gi|460372879|ref|XP_004232250.1|//PREDICTED: uncharacterized protein LOC101262766 [Solanum lycopersicum]
Solyc09g075420.3.1	830	1619.77039340749	4589.05005212549	1.50240622021418	3.95569605831354e-05	Up	6.34757400143126e-06	GO:0043231//intracellular membrane-bounded organelle	GO:0004629//phospholipase C activity;GO:0001071//nucleic acid binding transcription factor activity;GO:0003676//nucleic acid binding	GO:0007165//signal transduction;GO:0006351//transcription, DNA-templated	K09286//EREBP-like factor	gi|894216233|ref|NP_001234308.2|//ethylene response factor 2 [Solanum lycopersicum]
Solyc04g009430.3.1	1855	852.933088871247	169.465312436475	-2.33144256823478	5.80269713918862e-11	Down	3.38714168777747e-12	NA	GO:0046914//transition metal ion binding;GO:0051287//NAD binding;GO:0016810//hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	GO:0016458//gene silencing;GO:0035601//protein deacylation	K11414//NAD-dependent deacetylase sirtuin 4 [EC:3.5.1.-]	gi|460382193|ref|XP_004236824.1|//PREDICTED: NAD-dependent protein deacetylase SRT2 [Solanum lycopersicum];gi|970026190|ref|XP_015074400.1|//PREDICTED: NAD-dependent protein deacylase SRT2 [Solanum pennellii]
Solyc05g007790.3.1	634	40.933616134471	2.55189868775883	-4.00364316285811	0.000598682362089485	Down	0.00012617228549478	GO:0031224//intrinsic component of membrane	NA	NA	K11855//ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12]	gi|460386247|ref|XP_004238811.1|//PREDICTED: casparian strip membrane protein 2 [Solanum lycopersicum]
Solyc01g099600.3.1	1694	1546.30381187785	758.876047878752	-1.02688763702751	0.00115516747518502	Down	0.000260459522043917	NA	NA	NA	K07213//copper chaperone	gi|460368756|ref|XP_004230231.1|//PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 2 [Solanum lycopersicum]
Solyc12g010430.1.1	414	198.646589403645	435.904497455815	1.13380806504435	0.0164934011199424	Up	0.00514942328092431	NA	NA	NA	NA	gi|723748188|ref|XP_010313842.1|//PREDICTED: uncharacterized protein LOC101250190 [Solanum lycopersicum]
Solyc05g005760.3.1	2257	1298.02970647077	126.427118349935	-3.35994554410891	0.000386677643578041	Down	7.74565996939165e-05	NA	NA	NA	K11593//eukaryotic translation initiation factor 2C	gi|723696924|ref|XP_010320595.1|//PREDICTED: uncharacterized protein LOC101255990 isoform X2 [Solanum lycopersicum];gi|460385986|ref|XP_004238681.1|//PREDICTED: uncharacterized protein LOC101255990 isoform X1 [Solanum lycopersicum]
Solyc09g014860.3.1	1170	93.4041890532913	933.532565432945	3.3211411909845	0.00147899906659489	Up	0.000341854525568619	NA	NA	NA	NA	gi|460401615|ref|XP_004246313.1|//PREDICTED: protein LURP-one-related 10 [Solanum lycopersicum]
Solyc01g104740.3.1	441	209.145748302573	997.35365453679	2.25359649486494	0.00122376612175529	Up	0.000276975842079101	NA	GO:0003677//DNA binding	NA	K03627//putative transcription factor	gi|893576558|ref|NP_001234468.2|//ethylene-responsive transcriptional coactivator [Solanum lycopersicum]
Solyc06g005220.2.1	1690	56.9715365375209	8.5574288042277	-2.73499202708487	1.98705432856494e-05	Down	3.00635661236212e-06	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial;K17710//pentatricopeptide repeat domain-containing protein 1	gi|970033166|ref|XP_015077887.1|//PREDICTED: putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial [Solanum pennellii]
Solyc07g047880.3.1	823	229.806977651441	473.212340651087	1.04206509410145	2.40489158637238e-05	Up	3.70755613584171e-06	NA	NA	NA	NA	gi|460395963|ref|XP_004243549.1|//PREDICTED: uncharacterized protein LOC101253004 [Solanum lycopersicum]
Solyc05g011890.1.1	1011	1856.78007626754	34.7538760474872	-5.73948524874446	1.76539399061732e-45	Down	3.75083709054671e-48	NA	NA	NA	K01025	gi|460386672|ref|XP_004239020.1|//PREDICTED: cytosolic sulfotransferase 12-like [Solanum lycopersicum]
Solyc10g079170.2.1	9198	404.510162671611	129.713405699331	-1.64084836070616	0.0141560209666185	Down	0.00432838228675903	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K17422//large subunit ribosomal protein L41	gi|460407524|ref|XP_004249202.1|//PREDICTED: leucine-rich repeat receptor-like tyrosine-protein kinase At2g41820 [Solanum lycopersicum]
Solyc08g007830.1.1	690	42.134813282786	3507.08339777649	6.37911519578067	1.09714346604191e-22	Up	1.56629621102599e-24	NA	NA	NA	K09286//EREBP-like factor	gi|460398095|ref|XP_004244599.1|//PREDICTED: dehydration-responsive element-binding protein 1F-like [Solanum lycopersicum]
Solyc04g009020.3.1	2868	1630.67587488828	179.043292259346	-3.18708967473377	3.49143614924166e-10	Down	2.30350454158258e-11	GO:0005774//vacuolar membrane;GO:0009941//chloroplast envelope	GO:0003727//single-stranded RNA binding	GO:0006397//mRNA processing;GO:0009657//plastid organization;GO:0006417//regulation of translation;GO:1901918//negative regulation of exoribonuclease activity	K12855//pre-mRNA-processing factor 6;K20310//trafficking protein particle complex subunit 13;K12869//crooked neck	gi|723689873|ref|XP_010319339.1|//PREDICTED: psbB mRNA maturation factor Mbb1, chloroplastic [Solanum lycopersicum]
Solyc01g098990.3.1	5519	3872.63303318924	1541.43334798686	-1.32904229125925	8.34432063275017e-07	Down	9.61200696061059e-08	NA	NA	NA	K21026	gi|460368676|ref|XP_004230191.1|//PREDICTED: pentatricopeptide repeat-containing protein At3g05340 [Solanum lycopersicum]
Solyc01g099400.3.1	5906	2306.22620798636	5382.40226346988	1.22271618961242	0.0124254329753896	Up	0.00372837093528723	NA	NA	NA	K11251//histone H2A;K08876//SCY1-like protein 1	gi|460368734|ref|XP_004230220.1|//PREDICTED: autophagy-related protein 18a [Solanum lycopersicum]
Solyc10g007330.1.1	1767	188.482393023523	47.6845836078452	-1.98283493680654	0.000307683758641956	Down	6.02797761824259e-05	NA	NA	NA	K15502//serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A;K01599//uroporphyrinogen decarboxylase [EC:4.1.1.37]	gi|941355807|ref|NP_001234709.2|//peptide N-glycanase precursor [Solanum lycopersicum]
Solyc05g009340.1.1	357	22.4692433268953	432.610427209951	4.2670449926772	2.02711131340156e-18	Up	4.41267708001531e-20	NA	NA	NA	NA	gi|723697938|ref|XP_010320766.1|//PREDICTED: uncharacterized protein LOC104647284 [Solanum lycopersicum]
Solyc06g069400.3.1	997	25.3481027449656	79.5088014719092	1.64923680439507	0.00662421448942158	Up	0.00183951088214518	NA	GO:0016811//hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	NA	K13051//beta-aspartyl-peptidase (threonine type) [EC:3.4.19.5]	gi|460392009|ref|XP_004241610.1|//PREDICTED: isoaspartyl peptidase/L-asparaginase-like [Solanum lycopersicum];gi|723708701|ref|XP_010322583.1|//PREDICTED: subtilisin inhibitor-like [Solanum lycopersicum]
Solyc05g056130.3.1	1851	1314.42356931005	2853.20568526519	1.11815349835901	0.0181267579821905	Up	0.00574450933221201	GO:0031224//intrinsic component of membrane;GO:0043231//intracellular membrane-bounded organelle	GO:0004576//oligosaccharyl transferase activity	GO:0006464//cellular protein modification process	K12666//oligosaccharyltransferase complex subunit alpha (ribophorin I)	gi|460388009|ref|XP_004239664.1|//PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1B [Solanum lycopersicum]
Solyc10g080930.2.1	2293	1075.60973604291	2569.40878964255	1.25628172027695	0.00114025720498594	Up	0.000256800135400517	NA	NA	NA	NA	gi|460407766|ref|XP_004249321.1|//PREDICTED: probable mediator of RNA polymerase II transcription subunit 26b [Solanum lycopersicum]
Solyc12g005860.2.1	3277	1588.45811266176	8388.25897256882	2.40074435580495	1.01240437240401e-06	Up	1.19172991205154e-07	NA	NA	NA	K01681//aconitate hydratase [EC:4.2.1.3]	gi|723747143|ref|XP_004251517.2|//PREDICTED: aconitate hydratase, cytoplasmic [Solanum lycopersicum]
Solyc07g044920.1.1	1098	80.2659080969181	1.37362813138809	-5.86872395611677	8.12727506381743e-06	Down	1.13989205293855e-06	NA	NA	NA	K11649//SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C;K08955//ATP-dependent metalloprotease [EC:3.4.24.-];K04079//molecular chaperone HtpG	gi|723717412|ref|XP_010324105.1|//PREDICTED: F-box protein CPR30-like [Solanum lycopersicum]
Solyc02g094060.3.1	3674	539.582765125641	95.0830624714753	-2.50458399172358	1.88772967485566e-08	Down	1.6169683885561e-09	GO:0016020//membrane	GO:0005216//ion channel activity	GO:0006810//transport	K05016//chloride channel 7	gi|460371928|ref|XP_004231786.1|//PREDICTED: chloride channel protein CLC-a-like [Solanum lycopersicum];gi|698529310|ref|XP_009761471.1|//PREDICTED: chloride channel protein CLC-b-like [Nicotiana sylvestris]
Solyc07g045120.2.1	5030	70.9484073966375	246.628468460435	1.79749713534994	0.0119210698748083	Up	0.00356014655721501	NA	NA	NA	K02882//large subunit ribosomal protein L18Ae;K18789//xylogalacturonan beta-1,3-xylosyltransferase [EC:2.4.2.41]	gi|460396075|ref|XP_004243605.1|//PREDICTED: aspartic proteinase nepenthesin-2-like [Solanum lycopersicum]
Solyc06g084190.3.1	4332	647.459989808339	1650.5513891552	1.35008510847207	0.000199441635468224	Up	3.75049594057399e-05	NA	NA	NA	NA	gi|723711193|ref|XP_010323046.1|//PREDICTED: uncharacterized protein LOC101253798 [Solanum lycopersicum]
Solyc12g008640.2.1	2248	1330.45320104777	275.156060222516	-2.27359575515394	9.4295507413439e-12	Down	4.82935840115048e-13	NA	GO:0016755//transferase activity, transferring amino-acyl groups	NA	K18592//gamma-glutamyltranspeptidase / glutathione hydrolase / leukotriene-C4 hydrolase [EC:2.3.2.2 3.4.19.13 3.4.19.14]	gi|460412526|ref|XP_004251649.1|//PREDICTED: gamma-glutamyltranspeptidase 3 [Solanum lycopersicum];gi|565373908|ref|XP_006353508.1|//PREDICTED: gamma-glutamyltranspeptidase 3 [Solanum tuberosum]
Solyc01g091770.3.1	2622	404.419740607069	65.3419555002167	-2.62977188371879	1.0989382396678e-07	Down	1.07935823077555e-08	NA	GO:0046914//transition metal ion binding	NA	K19041//E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27];K10664//E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:2.3.2.27]	gi|969995372|ref|XP_015076977.1|//PREDICTED: RING-H2 finger protein ATL64-like [Solanum pennellii]
Solyc03g005790.2.1	543	81.3401919909145	4.28357200991153	-4.24708214952225	1.17618242771345e-05	Down	1.69097048743507e-06	GO:0031224//intrinsic component of membrane;GO:0009521//photosystem;GO:0009534//chloroplast thylakoid	GO:0043169//cation binding;GO:0046906//tetrapyrrole binding	GO:0006464//cellular protein modification process;GO:0006091//generation of precursor metabolites and energy	K08912//light-harvesting complex II chlorophyll a/b binding protein 1	gi|475604137|gb|EMT25652.1|//hypothetical protein F775_43704 [Aegilops tauschii];gi|460376914|ref|XP_004234241.1|//PREDICTED: uncharacterized protein LOC101245729 [Solanum lycopersicum]
Solyc02g080810.3.1	1732	38235.9177805217	4476.33829213794	-3.09453752872158	5.60495027010945e-39	Down	1.83550781175358e-41	GO:0043231//intracellular membrane-bounded organelle	GO:0016769//transferase activity, transferring nitrogenous groups;GO:0008168//methyltransferase activity	GO:0006544//glycine metabolic process;GO:0006730//one-carbon metabolic process	K00605//aminomethyltransferase [EC:2.1.2.10]	gi|460373793|ref|XP_004232698.1|//PREDICTED: aminomethyltransferase, mitochondrial [Solanum lycopersicum]
Solyc10g086420.1.1	1503	1687.27490828636	4497.45085736266	1.41441246597722	0.00109520159513363	Up	0.000245877411938641	NA	NA	NA	NA	gi|460408354|ref|XP_004249610.1|//PREDICTED: uncharacterized protein LOC101258910 [Solanum lycopersicum]
Solyc07g006810.3.1	5433	529.589491060408	208.181296315028	-1.34703403618364	9.4580297465127e-05	Down	1.64249890372009e-05	NA	GO:0003824//catalytic activity	NA	K13495//cis-zeatin O-glucosyltransferase [EC:2.4.1.215];K19562//bifunctional dethiobiotin synthetase / adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:6.3.3.3 2.6.1.62]	gi|565401389|ref|XP_006366184.1|//PREDICTED: zeatin O-glucosyltransferase-like [Solanum tuberosum];gi|723712472|ref|XP_010323243.1|//PREDICTED: bifunctional dethiobiotin synthetase/7,8-diamino-pelargonic acid aminotransferase, mitochondrial [Solanum lycopersicum]
Solyc04g074930.3.1	2574	7.59345940034948	44.8578562173427	2.56253147662545	0.00265593508694333	Up	0.000657053868049907	NA	NA	NA	K08505//protein transport protein SFT1	gi|723694501|ref|XP_010320194.1|//PREDICTED: uncharacterized protein LOC104647151 [Solanum lycopersicum]
Solyc03g117560.3.1	786	168.014167624296	19.6619012215561	-3.095108155968	0.00552777648798799	Down	0.0014962991224008	NA	GO:0046914//transition metal ion binding	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]	gi|460380300|ref|XP_004235895.1|//PREDICTED: lamin-like protein [Solanum lycopersicum]
Solyc05g052300.3.1	1759	436.374956666315	110.829170063997	-1.97723066207144	0.00131803959006126	Down	0.000300769284715784	GO:0016020//membrane	NA	NA	K14993//solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 6	gi|460388617|ref|XP_004239963.1|//PREDICTED: probable sodium-coupled neutral amino acid transporter 6 [Solanum lycopersicum]
Solyc06g066240.3.1	1710	35.0171220392904	1.40147141182724	-4.64304629681353	0.000232397800241104	Down	4.42524585045675e-05	NA	NA	NA	K07418;K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30];K15472//premnaspirodiene oxygenase [EC:1.14.13.121]	gi|460392319|ref|XP_004241764.1|//PREDICTED: premnaspirodiene oxygenase-like [Solanum lycopersicum]
Solyc11g009050.2.1	1771	655.394525149622	206.483274190328	-1.6663386979144	0.00557575810685514	Down	0.00151157330815407	NA	NA	NA	K10268//F-box and leucine-rich repeat protein 2/20;K17605//serine/threonine-protein phosphatase 2A activator	gi|460409355|ref|XP_004250104.1|//PREDICTED: F-box protein FBW2 [Solanum lycopersicum]
Solyc03g111830.3.1	3523	1091.61488400769	537.204339834208	-1.02292110597786	0.0216586708979622	Down	0.00706239947127527	NA	NA	NA	K00573//protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]	gi|460381103|ref|XP_004236292.1|//PREDICTED: protein-L-isoaspartate O-methyltransferase 1 [Solanum lycopersicum]
Solyc02g080170.1.1	1755	64.0112725610618	13.657381165033	-2.2286451200686	0.00180621998744495	Down	0.000426913707335189	NA	NA	NA	K17710//pentatricopeptide repeat domain-containing protein 1	gi|460376010|ref|XP_004233795.1|//PREDICTED: pentatricopeptide repeat-containing protein At4g21170 [Solanum lycopersicum]
Solyc01g090840.3.1	1100	46.1611354166025	131.143914323486	1.50640024629206	0.00498041253947	Up	0.0013297560392211	NA	NA	NA	NA	gi|723660542|ref|XP_010325535.1|//PREDICTED: zinc finger protein ZAT9-like [Solanum lycopersicum]
Solyc12g009600.2.1	904	3449.95152860193	582.754762271046	-2.56561529812722	8.4631442089231e-09	Down	6.90540579742533e-10	NA	NA	NA	NA	gi|460412677|ref|XP_004251724.1|//PREDICTED: thylakoid lumenal 16.5 kDa protein, chloroplastic [Solanum lycopersicum]
Solyc04g071870.1.1	1146	517.989580827874	2369.39145227487	2.19352158500051	3.30498798250279e-06	Up	4.28830444576271e-07	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460384245|ref|XP_004237823.1|//PREDICTED: leucine-rich repeat receptor protein kinase EXS [Solanum lycopersicum]
Solyc01g080700.3.1	3345	198.474539533433	59.4343189829171	-1.73958582133604	0.000207035280640655	Down	3.91027198078947e-05	NA	NA	NA	K01240//uridine nucleosidase [EC:3.2.2.3];K14319//Ran GTPase-activating protein 1	gi|565381266|ref|XP_006356996.1|//PREDICTED: uncharacterized protein LOC102590451 isoform X1 [Solanum tuberosum];gi|460367264|ref|XP_004229495.1|//PREDICTED: uncharacterized protein LOC101247856 isoform X1 [Solanum lycopersicum]
Solyc01g103185.1.1	1269	126.490440917822	48.2401011748149	-1.39072352415517	6.65352383668323e-05	Down	1.12024627889884e-05	NA	NA	NA	K18172//COX assembly mitochondrial protein 2	gi|460370974|ref|XP_004231322.1|//PREDICTED: uncharacterized protein LOC101256230 [Solanum lycopersicum]
Solyc11g042640.2.1	1359	8265.17374929356	750.869883507801	-3.46041031471464	1.021501984137e-37	Down	3.80759648179887e-40	NA	NA	NA	NA	gi|460410611|ref|XP_004250718.1|//PREDICTED: uncharacterized protein LOC101267576 [Solanum lycopersicum]
Solyc01g094750.3.1	1581	199.262730408056	37.1502875702876	-2.42322661398436	0.00104183500996838	Down	0.000232253238523838	NA	NA	NA	K15398//fatty acid omega-hydroxylase [EC:1.14.-.-]	gi|460368154|ref|XP_004229934.1|//PREDICTED: cytochrome P450 86A8-like [Solanum lycopersicum]
Solyc01g090890.3.1	1012	237.169748744122	10.1782678512436	-4.54235603632348	9.88512379244823e-07	Down	1.15807902488686e-07	NA	NA	NA	K14430//phosphate transporter	gi|460367856|ref|XP_004229786.1|//PREDICTED: SPX domain-containing protein 3 [Solanum lycopersicum]
Solyc12g056460.2.1	1745	203.323522752797	1038.31636445297	2.35239704806026	1.62966016247364e-09	Up	1.19363434443891e-10	GO:0005634//nucleus	GO:0003677//DNA binding;GO:0003700//transcription factor activity, sequence-specific DNA binding;GO:0046983//protein dimerization activity	GO:0006355//regulation of transcription, DNA-templated;GO:0006351//transcription, DNA-templated	K09260//MADS-box transcription enhancer factor 2A	gi|460414477|ref|XP_004252597.1|//PREDICTED: MADS-box protein SOC1-like [Solanum lycopersicum]
Solyc12g009990.2.1	2237	1737.32370571722	7751.7904094678	2.15766297581833	4.96028203520282e-12	Up	2.44796981310889e-13	NA	NA	NA	K13431//signal recognition particle receptor subunit alpha	gi|460412725|ref|XP_004251748.1|//PREDICTED: signal recognition particle receptor subunit alpha [Solanum lycopersicum]
Solyc04g015360.3.1	1757	757.678147308304	4751.66300609308	2.64877547813172	3.52921227510227e-08	Up	3.15982103950934e-09	GO:0005634//nucleus;GO:0005667//transcription factor complex	GO:0001228//transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding;GO:0003682//chromatin binding;GO:0000977//RNA polymerase II regulatory region sequence-specific DNA binding;GO:0008270//zinc ion binding;GO:0001085//RNA polymerase II transcription factor binding	GO:0030154//cell differentiation;GO:0045944//positive regulation of transcription from RNA polymerase II promoter	K17604//zinc finger SWIM domain-containing protein 3;K17895//GATA-binding protein 3	gi|460381805|ref|XP_004236632.1|//PREDICTED: GATA transcription factor 8 [Solanum lycopersicum]
Solyc08g043180.3.1	1214	2376.74366675979	833.011707278952	-1.51257763942723	7.56415473869189e-06	Down	1.05280131930355e-06	GO:0044425//membrane part	NA	NA	NA	gi|460398831|ref|XP_004244954.1|//PREDICTED: uncharacterized protein LOC101266541 [Solanum lycopersicum]
Solyc05g050120.3.1	2190	4036.47993075868	97420.8857434509	4.59306147631491	1.0631703813986e-11	Up	5.52430114682292e-13	NA	GO:0043169//cation binding;GO:0000166//nucleotide binding;GO:0016615//malate dehydrogenase activity	GO:0043648//dicarboxylic acid metabolic process	K00029//malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]	gi|922959905|ref|NP_001233951.2|//cytosolic NADP-malic enzyme [Solanum lycopersicum]
Solyc12g010790.2.1	1245	1092.40950953331	2516.66867680247	1.20400151796497	0.000290675633330577	Up	5.66009209974256e-05	GO:0005622//intracellular	GO:0032561//guanyl ribonucleotide binding;GO:0005525//GTP binding	GO:0006810//transport;GO:0007264//small GTPase mediated signal transduction;GO:0035556//intracellular signal transduction	K07904//Ras-related protein Rab-11A	gi|460412823|ref|XP_004251797.1|//PREDICTED: ras-related protein RABA1f-like [Solanum lycopersicum]
Solyc04g010190.1.1	570	3290.38396523161	236.675469812433	-3.79727385533723	4.98073129651312e-21	Down	8.22448175173443e-23	NA	NA	NA	K14826//FK506-binding nuclear protein [EC:5.2.1.8]	gi|460382089|ref|XP_004236772.1|//PREDICTED: uncharacterized protein LOC101268563 [Solanum lycopersicum]
Solyc01g079660.2.1	936	46.9566341693464	4368.91771174951	6.53980312234041	2.85419531460925e-11	Up	1.59157454549554e-12	NA	NA	NA	NA	gi|460367092|ref|XP_004229409.1|//PREDICTED: uncharacterized protein LOC101247750 [Solanum lycopersicum]
Solyc06g062660.3.1	3299	702.065075781138	3223.30587570642	2.19886443142462	1.85543731049686e-11	Up	9.94527677238143e-13	NA	NA	NA	K12309//beta-galactosidase [EC:3.2.1.23]	gi|723710192|ref|XP_010322847.1|//PREDICTED: beta-galactosidase 17 isoform X1 [Solanum lycopersicum];gi|460392501|ref|XP_004241854.1|//PREDICTED: beta-galactosidase 17 isoform X2 [Solanum lycopersicum]
Solyc04g077870.3.1	4205	387.141422114402	1138.61676512477	1.55634966555505	0.000110209845771426	Up	1.94555624561456e-05	GO:0031224//intrinsic component of membrane	GO:0046873//metal ion transmembrane transporter activity;GO:0032559//adenyl ribonucleotide binding;GO:0019829//cation-transporting ATPase activity	GO:0009206//purine ribonucleoside triphosphate biosynthetic process;GO:0006816//calcium ion transport	K01537//Ca2+-transporting ATPase [EC:3.6.3.8]	gi|723695114|ref|XP_010320298.1|//PREDICTED: calcium-transporting ATPase 1, chloroplastic [Solanum lycopersicum]
Solyc06g069600.2.1	1380	67.8505779327689	359.015386866511	2.40361266784802	2.35101644371984e-05	Up	3.61748765456817e-06	NA	NA	NA	K16189//phytochrome-interacting factor 4;K12126//phytochrome-interacting factor 3	gi|460393162|ref|XP_004242180.1|//PREDICTED: transcription factor UNE10-like [Solanum lycopersicum]
Solyc08g068780.2.1	806	92.6361162492037	1236.33019131319	3.73834552052997	6.25804484742681e-10	Up	4.29908180028612e-11	NA	GO:0016407//acetyltransferase activity	NA	NA	gi|350537063|ref|NP_001234022.1|//N-hydroxycinnamoyl-CoA:tyramine N-hydroxycinnamoyl transferase THT7-8 [Solanum lycopersicum]
Solyc03g083730.1.1	606	121.178719061692	4054.69858103195	5.06438640544474	4.51838958242947e-13	Up	1.90315350683812e-14	NA	GO:0030234//enzyme regulator activity	NA	K01051//pectinesterase [EC:3.1.1.11]	gi|460378349|ref|XP_004234935.1|//PREDICTED: 21 kDa protein-like [Solanum lycopersicum]
Solyc04g016290.3.1	3634	190.704633222341	64.754237660959	-1.5582933805904	0.0241748127986388	Down	0.00802973597915129	NA	NA	NA	NA	gi|723688771|ref|XP_010319168.1|//PREDICTED: uncharacterized protein LOC101261506 isoform X1 [Solanum lycopersicum];gi|723688774|ref|XP_004236588.2|//PREDICTED: uncharacterized protein LOC101261506 isoform X2 [Solanum lycopersicum]
Solyc01g079400.3.1	2358	262.761220080619	53.7799504338173	-2.28861203888313	0.00073280996242412	Down	0.000157471650267446	NA	NA	NA	K16573//gamma-tubulin complex component 6	gi|460367046|ref|XP_004229386.1|//PREDICTED: protein trichome birefringence-like 6 [Solanum lycopersicum]
Solyc05g026560.3.1	2901	3290.1569187608	1454.06220562698	-1.17806740271823	2.88493877432434e-06	Down	3.69811556765373e-07	NA	NA	NA	K08332//vacuolar protein 8	gi|460387338|ref|XP_004239335.1|//PREDICTED: uncharacterized protein LOC101268761 isoform X1 [Solanum lycopersicum]
Solyc04g064930.3.1	1457	3607.46473633594	1088.01189764438	-1.72929095930749	7.8335854166784e-09	Down	6.3625252061064e-10	NA	NA	NA	NA	gi|970025785|ref|XP_015074202.1|//PREDICTED: uncharacterized protein LOC107018276 isoform X3 [Solanum pennellii];gi|460384090|ref|XP_004237747.1|//PREDICTED: uncharacterized protein LOC101266329 isoform X1 [Solanum lycopersicum]
Solyc02g091730.2.1	2316	395.037022428497	1066.66401943234	1.43304605142588	0.000316777489887464	Up	6.22857186207088e-05	NA	NA	NA	K15193//protein SPT2	gi|723669776|ref|XP_010316052.1|//PREDICTED: uncharacterized protein LOC101249596 isoform X3 [Solanum lycopersicum];gi|723669770|ref|XP_010316049.1|//PREDICTED: uncharacterized protein LOC101249596 isoform X1 [Solanum lycopersicum]
Solyc03g096800.3.1	2898	3590.48504772982	1157.27364901584	-1.63344870998076	0.00285125793147302	Down	0.000710476340834097	NA	NA	NA	K17046//protein DEK;K00033//6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343];K20478//golgin subfamily B member 1;K14306//nuclear pore complex protein Nup62	gi|723683587|ref|XP_010318266.1|//PREDICTED: uncharacterized protein LOC101245142 isoform X2 [Solanum lycopersicum];gi|723683584|ref|XP_010318265.1|//PREDICTED: uncharacterized protein LOC101245142 isoform X1 [Solanum lycopersicum]
Solyc02g092560.3.1	2990	2604.8662433665	237.682639771323	-3.45410085534328	2.32152156662765e-11	Down	1.27204290403409e-12	NA	GO:0060089//molecular transducer activity	GO:0009314//response to radiation;GO:0023052//signaling	K10523//speckle-type POZ protein;K15095//(+)-neomenthol dehydrogenase [EC:1.1.1.208]	gi|460372181|ref|XP_004231910.1|//PREDICTED: BTB/POZ domain-containing protein At5g67385-like [Solanum lycopersicum]
Solyc01g109410.3.1	2188	1732.18932598219	3732.68103399695	1.10761560904108	0.00524617126689706	Up	0.00141068583268956	GO:0031090//organelle membrane;GO:0016021//integral component of membrane;GO:0005789//endoplasmic reticulum membrane	GO:0016757//transferase activity, transferring glycosyl groups;GO:0004576//oligosaccharyl transferase activity	GO:0018279//protein N-linked glycosylation via asparagine;GO:0006487//protein N-linked glycosylation	K12670//oligosaccharyltransferase complex subunit beta	gi|225428556|ref|XP_002284627.1|//PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit isoform X2 [Vitis vinifera];gi|460370080|ref|XP_004230882.1|//PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase 48 kDa subunit [Solanum lycopersicum]
Solyc02g077520.3.1	1164	3.08278182565489	80.3833531574265	4.70459206416968	1.00182084014627e-12	Up	4.46614628304362e-14	NA	NA	NA	K13262//isoflavone-7-O-methyltransferase [EC:2.1.1.150];K16040//trans-resveratrol di-O-methyltransferase [EC:2.1.1.240]	gi|460374258|ref|XP_004232928.1|//PREDICTED: trans-resveratrol di-O-methyltransferase-like [Solanum lycopersicum]
Solyc12g038430.2.1	2166	9.91855223366365	450.630153473812	5.50567049080758	0.000355602138264829	Up	7.06334078618031e-05	NA	NA	NA	K13459//disease resistance protein RPS2;K11548//kinetochore protein Nuf2;K20283//golgin subfamily A member 4;K09291//nucleoprotein TPR	gi|723750383|ref|XP_004252246.2|//PREDICTED: myosin-2 heavy chain [Solanum lycopersicum]
Solyc10g085230.2.1	1632	213.23673843551	6.50143376058813	-5.03555429975634	1.56287898334335e-07	Down	1.57581170789614e-08	NA	NA	NA	K04628//2-hydroxyacylsphingosine 1-beta-galactosyltransferase [EC:2.4.1.45];K13493//cytokinin-N-glucosyltransferase [EC:2.4.1.-];K00699//glucuronosyltransferase [EC:2.4.1.17]	gi|460408446|ref|XP_004249656.1|//PREDICTED: UDP-glucose iridoid glucosyltransferase-like [Solanum lycopersicum]
Solyc06g061010.3.1	682	74.0935260604303	175.838309264994	1.24683002222011	0.0411312697609841	Up	0.01484699628617	NA	NA	NA	NA	gi|460392755|ref|XP_004241979.1|//PREDICTED: uncharacterized protein LOC101246541 [Solanum lycopersicum]
Solyc02g014030.2.1	3036	274.018163790754	1353.40483602117	2.30425001562019	0.000451682140869532	Up	9.20604572191219e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|565376982|ref|XP_006354973.1|//PREDICTED: receptor-like protein kinase FERONIA [Solanum tuberosum]
Solyc06g053300.3.1	2075	647.081809821211	247.449882840175	-1.38681176291711	4.71516857058706e-05	Down	7.66293982695676e-06	NA	NA	NA	K13126//polyadenylate-binding protein;K12831//splicing factor 3B subunit 4;K11294//nucleolin	gi|460390735|ref|XP_004240980.1|//PREDICTED: polyadenylate-binding protein-interacting protein 11-like [Solanum lycopersicum]
Solyc02g084163.1.1	6987	25.1740015438977	193.352306304364	2.94122550894471	2.40372710145801e-09	Up	1.80628963640202e-10	NA	NA	NA	K08739//DNA mismatch repair protein MLH3;K17263//cullin-associated NEDD8-dissociated protein 1;K03544//ATP-dependent Clp protease ATP-binding subunit ClpX	gi|565347858|ref|XP_006340938.1|//PREDICTED: zinc finger CCCH domain-containing protein 45-like [Solanum tuberosum];gi|723672622|ref|XP_010316418.1|//PREDICTED: uncharacterized protein LOC104645757 [Solanum lycopersicum]
Solyc09g091580.3.1	4631	7442.23441907644	142.49987976002	-5.70670322682232	1.4749699176453e-27	Down	1.27550701093526e-29	NA	GO:0032559//adenyl ribonucleotide binding;GO:0016301//kinase activity	GO:0006464//cellular protein modification process	K08869//aarF domain-containing kinase	gi|460404728|ref|XP_004247833.1|//PREDICTED: uncharacterized aarF domain-containing protein kinase At1g71810, chloroplastic isoform X1 [Solanum lycopersicum]
Solyc05g050940.3.1	1673	386.284401696109	127.592296211373	-1.59812219774421	5.5470031225188e-07	Down	6.16149892094305e-08	NA	GO:0004175//endopeptidase activity	GO:0019538//protein metabolic process	K01409//N6-L-threonylcarbamoyladenine synthase [EC:2.3.1.234]	gi|460388796|ref|XP_004240050.1|//PREDICTED: probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial isoform X1 [Solanum lycopersicum];gi|723702405|ref|XP_010321491.1|//PREDICTED: probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial isoform X2 [Solanum lycopersicum]
Solyc04g078510.3.1	1391	3772.87248382216	7856.5078885572	1.05822485601105	0.00332137885040276	Up	0.000842972588056969	GO:0031224//intrinsic component of membrane	NA	NA	K02112//F-type H+-transporting ATPase subunit beta [EC:3.6.3.14]	gi|723695253|ref|XP_010320316.1|//PREDICTED: protein RER1A-like [Solanum lycopersicum]
Solyc03g120570.3.1	2209	65.3681011211625	150.097334145739	1.19923965968602	0.0180454543360735	Up	0.00571403513437246	NA	NA	NA	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|723685245|ref|XP_010318545.1|//PREDICTED: protein NRT1/ PTR FAMILY 1.2-like [Solanum lycopersicum]
Solyc06g009270.3.1	1950	865.152141506476	7092.15104195498	3.03519749612105	5.15166539452488e-12	Up	2.54818099691909e-13	NA	GO:0016301//kinase activity	GO:0007186//G-protein coupled receptor signaling pathway	K00901//diacylglycerol kinase (ATP) [EC:2.7.1.107]	gi|460389842|ref|XP_004240557.1|//PREDICTED: diacylglycerol kinase 7-like [Solanum lycopersicum]
Solyc06g069390.3.1	1551	539.212461578373	177.685419147847	-1.60152853982281	3.52033251615226e-08	Down	3.15055851024362e-09	NA	NA	NA	K09716//D-aminoacyl-tRNA deacylase [EC:3.1.1.96]	gi|460392013|ref|XP_004241612.1|//PREDICTED: D-aminoacyl-tRNA deacylase isoform X1 [Solanum lycopersicum];gi|723708708|ref|XP_010322584.1|//PREDICTED: D-aminoacyl-tRNA deacylase isoform X2 [Solanum lycopersicum]
Solyc06g069650.3.1	3240	7.43555526520589	328.543858387314	5.46550168074172	1.22690864096564e-17	Up	2.93144639503121e-19	NA	NA	NA	K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1];K13415//protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1]	gi|460391965|ref|XP_004241588.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g74360 [Solanum lycopersicum]
Solyc05g053540.3.1	2202	1128.48069708857	515.580980994322	-1.13011079017658	8.34647994942042e-07	Down	9.6195452525749e-08	NA	NA	NA	K01687//dihydroxy-acid dehydratase [EC:4.2.1.9]	gi|460389135|ref|XP_004240214.1|//PREDICTED: dihydroxy-acid dehydratase, chloroplastic [Solanum lycopersicum]
BGI_novel_G000321	1612	11.4714423215987	37.9287686114213	1.72524573915168	0.0222211644846932	Up	0.00727729056070203	NA	NA	NA	NA	gi|971555529|ref|XP_015165457.1|//PREDICTED: uncharacterized protein LOC102584631 [Solanum tuberosum]
Solyc01g100910.3.1	1653	24.0707610040137	3.20544191058353	-2.9086865843813	0.0101951818576352	Down	0.00298809881268025	NA	NA	NA	K07874//Ras-related protein Rab-1A;K00801//farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21];K01623//fructose-bisphosphate aldolase, class I [EC:4.1.2.13]	gi|460368963|ref|XP_004230334.1|//PREDICTED: WAT1-related protein At1g09380-like [Solanum lycopersicum]
Solyc12g096460.2.1	1724	368.695467493396	1238.52078884184	1.7481164986568	4.45861953931752e-07	Up	4.86612420274404e-08	NA	NA	NA	K01191//alpha-mannosidase [EC:3.2.1.24]	gi|460415421|ref|XP_004253057.1|//PREDICTED: uncharacterized protein LOC101255571 [Solanum lycopersicum]
Solyc02g087540.2.1	1898	736.876908931535	9575.81065769788	3.69989907557183	4.6046813744799e-06	Up	6.11886428359208e-07	NA	NA	NA	K08900//mitochondrial chaperone BCS1	gi|460375794|ref|XP_004233689.1|//PREDICTED: mitochondrial chaperone BCS1-like [Solanum lycopersicum];gi|460375792|ref|XP_004233688.1|//PREDICTED: putative cell division cycle ATPase [Solanum lycopersicum]
Solyc08g082310.3.1	2079	139.404186590599	707.216342343853	2.3428777239718	0.00014003957310235	Up	2.53687313730961e-05	NA	NA	NA	K19041//E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27]	gi|460399984|ref|XP_004245516.1|//PREDICTED: putative RING-H2 finger protein ATL21A [Solanum lycopersicum]
Solyc03g033500.3.1	591	325.095612608818	669.092204726116	1.04134095019302	0.0400141039197426	Up	0.0143766194901744	NA	NA	NA	K09250//cellular nucleic acid-binding protein	gi|460377505|ref|XP_004234533.1|//PREDICTED: cold shock domain-containing protein 3 [Solanum lycopersicum]
Solyc07g005110.3.1	1753	16.3828363715703	123.342136759258	2.91240868617434	0.00170804588995136	Up	0.000400780858701498	GO:0009506//plasmodesma;GO:0016021//integral component of membrane;GO:0005886//plasma membrane	GO:0005524//ATP binding;GO:0004674//protein serine/threonine kinase activity;GO:0004568//chitinase activity	GO:0006032//chitin catabolic process;GO:0006952//defense response;GO:0005975//carbohydrate metabolic process;GO:0006468//protein phosphorylation	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K01183//chitinase [EC:3.2.1.14]	gi|698530448|ref|XP_009762048.1|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 [Nicotiana sylvestris];gi|723711986|ref|XP_010323171.1|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410 isoform X1 [Solanum lycopersicum]
Solyc07g006340.3.1	1116	813.894662049222	169.415498438004	-2.26427622534209	2.75784149263771e-15	Down	8.5424417786713e-17	NA	GO:0016407//acetyltransferase activity	NA	K18178//cytochrome c oxidase assembly factor 5	gi|460394114|ref|XP_004242650.1|//PREDICTED: uncharacterized protein LOC101260060 [Solanum lycopersicum]
Solyc01g028805.1.1	3734	294.156205410355	47.4469232595908	-2.6321960286585	2.58131565454629e-06	Down	3.27908295463462e-07	NA	GO:0046872//metal ion binding	NA	K07437//cytochrome P450, family 26, subfamily A;K20667	gi|565346046|ref|XP_006340081.1|//PREDICTED: beta-amyrin 28-oxidase-like [Solanum tuberosum]
Solyc12g044950.2.1	1037	33.3353177499918	5278.67438650233	7.30698038745102	1.63382908543683e-48	Up	2.67960637241764e-51	NA	GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K10256//omega-6 fatty acid desaturase / acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.6 1.14.19.22]	gi|971549129|ref|XP_015163857.1|//PREDICTED: delta(12)-acyl-lipid-desaturase-like isoform X3 [Solanum tuberosum];gi|802083979|ref|NP_001292750.1|//lipid desaturase-like protein [Solanum lycopersicum]
Solyc03g033260.3.1	1590	189.779737450481	13.9504872956109	-3.76593854389221	0.000134644514407443	Down	2.43110939238727e-05	GO:0016021//integral component of membrane	NA	NA	NA	gi|460384056|ref|XP_004237731.1|//PREDICTED: maltose excess protein 1-like, chloroplastic [Solanum lycopersicum];gi|970024235|ref|XP_015073445.1|//PREDICTED: maltose excess protein 1-like, chloroplastic [Solanum pennellii]
Solyc11g039650.2.1	2742	2850.65177166514	6634.29520806726	1.21865139545394	0.00108706506072826	Up	0.000243523968054899	NA	GO:0032561//guanyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity	GO:0009207//purine ribonucleoside triphosphate catabolic process	K01528//dynamin GTPase [EC:3.6.5.5]	gi|460410544|ref|XP_004250687.1|//PREDICTED: dynamin-2A-like [Solanum lycopersicum]
Solyc01g098640.3.1	2293	5257.8341163631	1073.06279342562	-2.29273412381942	5.06800622675498e-08	Down	4.67545676577403e-09	NA	NA	NA	K09060//plant G-box-binding factor;K10396//kinesin family member 5;K01206//alpha-L-fucosidase [EC:3.2.1.51]	gi|460368630|ref|XP_004230168.1|//PREDICTED: UPF0603 protein At1g54780, chloroplastic [Solanum lycopersicum]
Solyc11g018800.2.1	1017	20.8415606428369	2742.10075477846	7.03967445922162	1.86885110315148e-22	Up	2.70282625623518e-24	NA	GO:0016209//antioxidant activity;GO:0005506//iron ion binding;GO:0003824//catalytic activity	GO:0042743//hydrogen peroxide metabolic process;GO:0006950//response to stress	K00430//peroxidase [EC:1.11.1.7]	gi|460409955|ref|XP_004250402.1|//PREDICTED: lignin-forming anionic peroxidase [Solanum lycopersicum]
Solyc03g082890.3.1	750	2191.61312023494	520.242998299035	-2.074735596907	3.14282775493471e-05	Down	4.9541593020795e-06	NA	NA	NA	NA	gi|460378455|ref|XP_004234987.1|//PREDICTED: thylakoid lumenal 17.4 kDa protein, chloroplastic [Solanum lycopersicum]
Solyc03g119520.3.1	1302	646.84075402972	2859.62589425264	2.14434393779109	2.20737288539531e-17	Up	5.47153335614985e-19	NA	NA	NA	NA	gi|723685630|ref|XP_010318611.1|//PREDICTED: uncharacterized protein LOC101257942 [Solanum lycopersicum]
Solyc02g083540.3.1	2222	1026.309695224	238.952813867498	-2.10266847696173	0.00171572361850019	Down	0.000402966099603761	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1];K08242//24-methylenesterol C-methyltransferase [EC:2.1.1.143]	gi|460373409|ref|XP_004232512.1|//PREDICTED: protein MID1-COMPLEMENTING ACTIVITY 1 [Solanum lycopersicum]
Solyc02g083810.3.1	1707	53037.436239331	5414.41496623682	-3.29213367262529	1.23674088823287e-17	Down	2.95954842047674e-19	GO:0009532//plastid stroma;GO:0009534//chloroplast thylakoid;GO:0034357//photosynthetic membrane	GO:0000166//nucleotide binding;GO:0050662//coenzyme binding;GO:0008937//ferredoxin-NAD(P) reductase activity	GO:0006091//generation of precursor metabolites and energy;GO:0051234//establishment of localization	K02641//ferredoxin--NADP+ reductase [EC:1.18.1.2]	gi|460373374|ref|XP_004232495.1|//PREDICTED: ferredoxin--NADP reductase, leaf-type isozyme, chloroplastic [Solanum lycopersicum]
Solyc04g080830.3.1	2876	355.504400278929	59.2309659379928	-2.58544389811377	1.58141753451075e-05	Down	2.34135621256773e-06	NA	NA	NA	K15271//ATP-dependent DNA helicase HFM1/MER3 [EC:3.6.4.12];K17710//pentatricopeptide repeat domain-containing protein 1	gi|460385842|ref|XP_004238610.1|//PREDICTED: pentatricopeptide repeat-containing protein At1g19720 [Solanum lycopersicum]
Solyc05g013560.3.1	642	82.455425978281	35.5343606336018	-1.21439969205867	0.0170288034535891	Down	0.00533689352310188	NA	NA	NA	NA	gi|697120887|ref|XP_009614414.1|//PREDICTED: uncharacterized protein LOC104107349 isoform X1 [Nicotiana tomentosiformis]
Solyc04g076320.3.1	2500	1058.24809499682	447.898372117893	-1.24043456373886	3.14083807209043e-06	Down	4.05424267319561e-07	NA	NA	NA	K01755//argininosuccinate lyase [EC:4.3.2.1]	gi|460384596|ref|XP_004237996.1|//PREDICTED: argininosuccinate lyase, chloroplastic [Solanum lycopersicum]
Solyc05g053255.1.1	2471	74.8180432006902	184.915095718526	1.30540486623187	0.0430360960778891	Up	0.0156750744693474	NA	NA	NA	K17808//mitochondrial protein import protein ZIM17	gi|723701821|ref|XP_010321416.1|//PREDICTED: uncharacterized protein C24H6.02c isoform X2 [Solanum lycopersicum];gi|971565225|ref|XP_015167970.1|//PREDICTED: uncharacterized protein C24H6.02c isoform X2 [Solanum tuberosum]
Solyc08g067610.3.1	4545	195.157337416276	4643.0611721715	4.57236667793803	5.26778143397048e-09	Up	4.17055604806669e-10	GO:0016021//integral component of membrane	GO:0005524//ATP binding;GO:0016887//ATPase activity	GO:0006810//transport	K05681//ATP-binding cassette, subfamily G (WHITE), member 2	gi|641860898|gb|KDO79586.1|//hypothetical protein CISIN_1g046196mg [Citrus sinensis];gi|460399390|ref|XP_004245224.1|//PREDICTED: pleiotropic drug resistance protein 1-like [Solanum lycopersicum]
Solyc12g096630.2.1	1973	0.818524677932269	25.8120677838507	4.9788759953913	5.97422578608065e-05	Up	9.9652081380315e-06	NA	NA	NA	K01240//uridine nucleosidase [EC:3.2.2.3]	gi|460415389|ref|XP_004253041.1|//PREDICTED: probable uridine nucleosidase 2 isoform X1 [Solanum lycopersicum];gi|747055539|ref|XP_011074011.1|//PREDICTED: probable uridine nucleosidase 2 isoform X1 [Sesamum indicum]
Solyc05g007000.3.1	2185	134.245710153833	4.81090840715674	-4.80242284431564	3.01209361591693e-16	Down	8.44302370347969e-18	NA	NA	NA	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460386157|ref|XP_004238766.1|//PREDICTED: protein NRT1/ PTR FAMILY 4.6-like isoform X1 [Solanum lycopersicum]
Solyc06g011560.3.1	2026	1286.20525563813	526.201213998821	-1.2894344076195	1.12238639483825e-05	Down	1.60693534463014e-06	NA	NA	NA	NA	gi|723704713|ref|XP_010321904.1|//PREDICTED: uncharacterized protein LOC101250307 isoform X4 [Solanum lycopersicum];gi|723704707|ref|XP_010321902.1|//PREDICTED: uncharacterized protein LOC101250307 isoform X2 [Solanum lycopersicum]
Solyc02g037495.1.1	1653	814.162850746813	8709.97984371997	3.41928008051645	3.64663840457835e-08	Up	3.27854921419523e-09	NA	GO:0016405//CoA-ligase activity	NA	K00666//fatty-acyl-CoA synthase [EC:6.2.1.-];K01904//4-coumarate--CoA ligase [EC:6.2.1.12]	gi|460371618|ref|XP_004231632.1|//PREDICTED: probable acyl-activating enzyme 6 [Solanum lycopersicum]
Solyc03g034206.1.1	1426	145.549368889961	24.8976903742954	-2.54742476136693	0.00845864777924625	Down	0.00241734205022667	NA	NA	NA	NA	gi|969998482|ref|XP_015073780.1|//PREDICTED: uncharacterized protein LOC107017973 [Solanum pennellii]
Solyc11g039830.2.1	2312	2262.52161101154	1101.31704787026	-1.03870171982011	0.0204622989583691	Down	0.00660974663684311	GO:0044424//intracellular part	GO:0032559//adenyl ribonucleotide binding;GO:0004812//aminoacyl-tRNA ligase activity	GO:0006418//tRNA aminoacylation for protein translation	K01880//glycyl-tRNA synthetase [EC:6.1.1.14]	gi|460410549|ref|XP_004250689.1|//PREDICTED: glycine--tRNA ligase 1, mitochondrial-like [Solanum lycopersicum]
Solyc05g017950.3.1	2223	4965.71062449	2053.4616310119	-1.27394220051016	1.59876702687354e-05	Down	2.37002253834653e-06	GO:0016020//membrane	NA	GO:0006811//ion transport	K03453//bile acid:Na+ symporter, BASS family	gi|922959993|ref|NP_001234028.2|//anion:sodium symporter [Solanum lycopersicum]
BGI_novel_G000418	1348	0.491898982482524	153.499794292523	8.28565893610265	5.51655094144394e-13	Up	2.35853732288512e-14	NA	NA	NA	NA	gi|255647345|gb|ACU24139.1|//unknown [Glycine max]
Solyc04g050820.2.1	3147	611.028538014805	21.2294185371934	-4.84710300029175	1.88774778702597e-16	Down	5.14366942118676e-18	GO:0044424//intracellular part	GO:0016872//intramolecular lyase activity	GO:0006644//phospholipid metabolic process;GO:0006020//inositol metabolic process	K01858//myo-inositol-1-phosphate synthase [EC:5.5.1.4]	gi|565401987|ref|XP_006366474.1|//PREDICTED: inositol-3-phosphate synthase [Solanum tuberosum]
Solyc02g071970.1.1	597	152.655096754277	1336.10482815927	3.12968553999625	0.000115698141758719	Up	2.05537998964535e-05	NA	NA	NA	NA	gi|460374547|ref|XP_004233072.1|//PREDICTED: N66 matrix protein-like [Solanum lycopersicum]
Solyc03g025430.1.1	720	73.895320424347	0.527062363051991	-7.13136552089172	1.77847699074794e-08	Down	1.51808271537676e-09	NA	NA	NA	K12600//superkiller protein 3	gi|460377264|ref|XP_004234413.1|//PREDICTED: uncharacterized protein LOC101256847 [Solanum lycopersicum]
Solyc03g113040.3.1	4204	178.814166881218	458.165998817128	1.35740935684491	0.0137862320047304	Up	0.00420195389528404	NA	NA	NA	K05643//ATP-binding cassette, subfamily A (ABC1), member 3	gi|565354989|ref|XP_006344387.1|//PREDICTED: ABC transporter A family member 7-like [Solanum tuberosum];gi|723687695|ref|XP_010318972.1|//PREDICTED: ABC transporter A family member 7 isoform X2 [Solanum lycopersicum]
Solyc03g007860.1.1	558	386.137271667862	22.1981166041176	-4.12060463463638	1.60355079972981e-08	Down	1.35980247106953e-09	NA	NA	NA	NA	gi|460377002|ref|XP_004234285.1|//PREDICTED: uncharacterized protein PAM68-like [Solanum lycopersicum]
Solyc06g009795.1.1	2155	230.533701148367	51.8225199880853	-2.1533265934023	0.000470331147674944	Down	9.62821925984341e-05	NA	NA	NA	K01184//polygalacturonase [EC:3.2.1.15];K18801//glucuronoxylan 4-O-methyltransferase [EC:2.1.1.112]	gi|970031741|ref|XP_015077165.1|//PREDICTED: probable polygalacturonase [Solanum pennellii];gi|565378823|ref|XP_006355845.1|//PREDICTED: probable polygalacturonase isoform X2 [Solanum tuberosum];gi|971565458|ref|XP_015168029.1|//PREDICTED: probable polygalacturonase isoform X1 [Solanum tuberosum]
Solyc10g081560.2.1	1157	1108.42787283401	368.283536484834	-1.58962608433514	0.00236320194822512	Down	0.000575649497974176	NA	GO:0016616//oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	GO:0008152//metabolic process	K08081//tropinone reductase I [EC:1.1.1.206];K05354//tropinone reductase II [EC:1.1.1.236]	gi|460407882|ref|XP_004249378.1|//PREDICTED: tropinone reductase 1 isoform X2 [Solanum lycopersicum];gi|723738888|ref|XP_010312199.1|//PREDICTED: tropinone reductase 1 isoform X3 [Solanum lycopersicum]
Solyc02g065060.3.1	1682	479.69479111302	102.26151648123	-2.22985344809758	1.00907176606254e-13	Down	3.90419149087864e-15	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K04708//3-dehydrosphinganine reductase [EC:1.1.1.102]	gi|460375281|ref|XP_004233435.1|//PREDICTED: 3-ketodihydrosphingosine reductase-like isoform X1 [Solanum lycopersicum]
Solyc01g100400.3.1	2289	206.993253736515	74.6042599595911	-1.47225383167502	3.22066801671961e-06	Down	4.16809279635101e-07	GO:0005739//mitochondrion	GO:0003723//RNA binding;GO:0019239//deaminase activity;GO:0009982//pseudouridine synthase activity	GO:0031119//tRNA pseudouridine synthesis	K06180//23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23];K01507//inorganic pyrophosphatase [EC:3.6.1.1]	gi|723663129|ref|XP_004230301.2|//PREDICTED: RNA pseudouridine synthase 1 isoform X1 [Solanum lycopersicum]
Solyc08g076060.3.1	2923	604.608411700585	280.719390939199	-1.10687232808212	0.0321929261594873	Down	0.0111801659843426	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1];K01183//chitinase [EC:3.2.1.14]	gi|723725772|ref|XP_010325596.1|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g67520 [Solanum lycopersicum]
Solyc04g056507.1.1	6188	4.41690638495017	1171.48645973538	8.05108830881509	1.47705691263408e-28	Up	1.17270434766311e-30	NA	NA	NA	NA	gi|565367549|ref|XP_006350426.1|//PREDICTED: bZIP transcription factor 17-like [Solanum tuberosum];gi|971555804|ref|XP_015165531.1|//PREDICTED: bZIP transcription factor 17-like [Solanum tuberosum]
BGI_novel_G000166	893	200.488400785187	27.0114185888406	-2.89187745769638	2.6427343129289e-06	Down	3.36596956436487e-07	NA	NA	NA	NA	gi|460382645|ref|XP_004237048.1|//PREDICTED: uncharacterized protein LOC101249814 [Solanum lycopersicum]
Solyc01g009440.2.1	543	2.64624591398092	31.3775756281979	3.56771484583337	0.00565624268403038	Up	0.00153866330356544	NA	NA	NA	K09286//EREBP-like factor	gi|460365965|ref|XP_004228864.1|//PREDICTED: dehydration-responsive element-binding protein 1D-like [Solanum lycopersicum]
Solyc11g066850.2.1	3960	399.382729331572	78.4295277845538	-2.34830312783547	5.71132250308157e-06	Down	7.73842899161381e-07	NA	GO:0004519//endonuclease activity;GO:0004518//nuclease activity	GO:0000373//Group II intron splicing;GO:0048564//photosystem I assembly;GO:0090305//nucleic acid phosphodiester bond hydrolysis;GO:0045292//mRNA cis splicing, via spliceosome	K17964//leucine-rich PPR motif-containing protein, mitochondrial;K17710//pentatricopeptide repeat domain-containing protein 1	gi|460411219|ref|XP_004251011.1|//PREDICTED: pentatricopeptide repeat-containing protein At2g15820 isoform X1 [Solanum lycopersicum]
Solyc01g110510.3.1	3115	1362.6782343356	511.155457982456	-1.41461091190796	0.000169527915667777	Down	3.14310366979097e-05	NA	GO:0043169//cation binding;GO:0016763//transferase activity, transferring pentosyl groups;GO:0051540//metal cluster binding	GO:0006144//purine nucleobase metabolic process;GO:0006163//purine nucleotide metabolic process	K00764//amidophosphoribosyltransferase [EC:2.4.2.14]	gi|460370120|ref|XP_004230902.1|//PREDICTED: amidophosphoribosyltransferase, chloroplastic-like [Solanum lycopersicum]
Solyc01g111660.3.1	1108	3388.97290634758	800.905596982876	-2.08114399621698	0.00233204709373483	Down	0.000566408933307596	NA	NA	NA	K09872//aquaporin PIP	gi|927928759|ref|NP_001266257.2|//aquaporin PIP2-7-like [Solanum lycopersicum]
Solyc02g081150.1.1	1050	1414.56823263948	319.531085012613	-2.14633357463711	0.000106791151294359	Down	1.87684612476853e-05	NA	NA	NA	NA	gi|460373757|ref|XP_004232680.1|//PREDICTED: uncharacterized protein LOC101244145 [Solanum lycopersicum]
Solyc01g107625.1.1	1458	44.4566345665402	196.331824689244	2.14282340403795	1.84290391404855e-05	Up	2.76696621656015e-06	NA	NA	NA	NA	gi|460369788|ref|XP_004230739.1|//PREDICTED: cell division cycle protein 123 homolog [Solanum lycopersicum]
Solyc03g119240.3.1	2782	58.0829269428825	589.250741790048	3.34269560837918	7.19906288027553e-12	Up	3.62260879990009e-13	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460380068|ref|XP_004235780.1|//PREDICTED: probable serine/threonine-protein kinase At1g18390 isoform X2 [Solanum lycopersicum];gi|723685736|ref|XP_010318629.1|//PREDICTED: probable serine/threonine-protein kinase At1g18390 isoform X1 [Solanum lycopersicum]
Solyc09g075820.3.1	1987	1960.3657365165	27217.8390111447	3.79535778549001	3.94911415730375e-07	Up	4.2864993387761e-08	GO:0031224//intrinsic component of membrane	GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;GO:0022857//transmembrane transporter activity	GO:0071702//organic substance transport;GO:0008152//metabolic process	K16055//trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12];K08150//MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13	gi|803378365|ref|NP_001234785.2|//hexose transporter protein [Solanum lycopersicum]
Solyc09g056260.3.1	2097	1111.9985176571	374.059530224819	-1.57181507167808	0.00395616781368183	Down	0.00102826741332948	NA	NA	NA	K06173//tRNA pseudouridine38-40 synthase [EC:5.4.99.12]	gi|723729712|ref|XP_010326264.1|//PREDICTED: putative tRNA pseudouridine synthase isoform X2 [Solanum lycopersicum];gi|460403086|ref|XP_004247032.1|//PREDICTED: putative tRNA pseudouridine synthase isoform X1 [Solanum lycopersicum]
Solyc12g008420.2.1	2172	498.236543253052	177.358907868974	-1.49015904860254	0.000265778887679561	Down	5.13765212280528e-05	NA	NA	NA	K11699//RNA-dependent RNA polymerase [EC:2.7.7.48]	gi|723747592|ref|XP_010313737.1|//PREDICTED: probable RNA-dependent RNA polymerase 5 [Solanum lycopersicum]
Solyc10g005180.3.1	2482	4614.47117400004	2022.012598306	-1.19037333602326	6.31806635154333e-08	Down	5.95821823073081e-09	NA	NA	NA	NA	gi|460405894|ref|XP_004248409.1|//PREDICTED: uncharacterized protein LOC101259586 isoform X2 [Solanum lycopersicum];gi|460405892|ref|XP_004248408.1|//PREDICTED: uncharacterized protein LOC101259586 isoform X1 [Solanum lycopersicum]
Solyc05g009470.3.1	3284	7222.03370569418	421.736765025704	-4.0979904538789	2.80004367293579e-13	Down	1.14911588038702e-14	NA	GO:0004558//alpha-1,4-glucosidase activity;GO:0005488//binding	GO:0044238//primary metabolic process	K15925//alpha-D-xyloside xylohydrolase [EC:3.2.1.177]	gi|460386502|ref|XP_004238937.1|//PREDICTED: alpha-xylosidase 1 [Solanum lycopersicum];gi|698507621|ref|XP_009799141.1|//PREDICTED: alpha-xylosidase 1-like [Nicotiana sylvestris]
Solyc02g062790.3.1	2453	3.81459409674718	48.8161855693996	3.67775811321311	0.000717922339789392	Up	0.000153844324267527	NA	GO:0004674//protein serine/threonine kinase activity;GO:0000166//nucleotide binding	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723677670|ref|XP_010317211.1|//PREDICTED: proline-rich receptor-like protein kinase PERK4 [Solanum lycopersicum]
Solyc07g048080.3.1	2431	3311.52469986171	448.129193835191	-2.88550899847432	2.29438058610283e-17	Down	5.71286056178877e-19	NA	NA	NA	K01868//threonyl-tRNA synthetase [EC:6.1.1.3]	gi|460395939|ref|XP_004243537.1|//PREDICTED: probable threonine--tRNA ligase, cytoplasmic [Solanum lycopersicum]
Solyc07g055320.3.1	2762	46967.08116169	7440.76386088359	-2.65812729839405	3.70828275148332e-09	Down	2.87257747794526e-10	GO:0044464//cell part;GO:0016021//integral component of membrane	GO:0004175//endopeptidase activity;GO:0005524//ATP binding;GO:0004222//metalloendopeptidase activity;GO:0032559//adenyl ribonucleotide binding;GO:0042623//ATPase activity, coupled	GO:0006508//proteolysis;GO:0019538//protein metabolic process;GO:0009987//cellular process;GO:0009057//macromolecule catabolic process	K03798//cell division protease FtsH [EC:3.4.24.-]	gi|460395390|ref|XP_004243266.1|//PREDICTED: ATP-dependent zinc metalloprotease FTSH 2, chloroplastic [Solanum lycopersicum]
Solyc05g010030.3.1	1486	242.853990131754	1972.21331880131	3.02165450973959	7.1669733822317e-07	Up	8.10785903349978e-08	NA	NA	NA	NA	gi|460386582|ref|XP_004238977.1|//PREDICTED: protein MIZU-KUSSEI 1 [Solanum lycopersicum]
Solyc01g065740.3.1	2462	51.7516974010038	9.4719509957388	-2.44987266011624	0.00660349923006511	Down	0.00183252764901725	NA	NA	NA	K06911//uncharacterized protein	gi|460366814|ref|XP_004229273.1|//PREDICTED: putative F-box/LRR-repeat protein At3g18150 [Solanum lycopersicum]
Solyc07g063180.3.1	1773	28.6779955894995	81.9619323580069	1.51500980583651	0.000478576374322879	Up	9.80949561056178e-05	NA	NA	NA	K10418//dynein light chain LC8-type	gi|460397624|ref|XP_004244367.1|//PREDICTED: dynein light chain, cytoplasmic-like [Solanum lycopersicum]
Solyc05g015715.1.1	1365	27.3131675433849	120.600723289494	2.14257001953876	0.00207551952497191	Up	0.000497450072520105	NA	NA	NA	NA	gi|113205226|gb|ABI34306.1|//Polyprotein, putative [Solanum demissum];gi|970033776|ref|XP_015078191.1|//PREDICTED: uncharacterized protein LOC107022001 [Solanum pennellii]
Solyc03g095960.1.1	990	156.698268088747	74.0968416461409	-1.08050527993233	0.025557020796792	Down	0.00857076621845602	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial;K17426//large subunit ribosomal protein L45	gi|723683420|ref|XP_010318234.1|//PREDICTED: pentatricopeptide repeat-containing protein At2g40240, mitochondrial [Solanum lycopersicum]
Solyc04g054990.3.1	855	993.861863532312	407.085552183424	-1.28771332620973	0.0127850602756667	Down	0.00385236067649526	NA	NA	NA	NA	gi|460383377|ref|XP_004237402.1|//PREDICTED: lipoxygenase homology domain-containing protein 1-like [Solanum lycopersicum]
Solyc07g062150.3.1	2641	380.543632024334	151.959023613246	-1.32437953106865	0.00334605411142355	Down	0.000850607165644423	NA	NA	NA	K00858//NAD+ kinase [EC:2.7.1.23]	gi|723718929|ref|XP_010324401.1|//PREDICTED: NADH kinase isoform X1 [Solanum lycopersicum];gi|723718934|ref|XP_010324402.1|//PREDICTED: NADH kinase isoform X3 [Solanum lycopersicum];gi|723718937|ref|XP_010324403.1|//PREDICTED: NADH kinase isoform X4 [Solanum lycopersicum]
Solyc01g106400.3.1	5491	867.833051155372	297.912975185844	-1.54252657226428	0.0135703685866409	Down	0.00412857270031919	NA	NA	NA	K15078//structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]	gi|970000268|ref|XP_015087117.1|//PREDICTED: putative disease resistance protein RGA4 [Solanum pennellii]
Solyc08g015780.3.1	2604	1485.28455212233	410.265581609321	-1.85610931781739	3.60812564129576e-05	Down	5.75621654418736e-06	NA	NA	NA	NA	gi|460398476|ref|XP_004244785.1|//PREDICTED: ankyrin repeat protein SKIP35 isoform X2 [Solanum lycopersicum];gi|697122401|ref|XP_009615190.1|//PREDICTED: ankyrin repeat protein SKIP35 [Nicotiana tomentosiformis]
Solyc01g081020.1.1	2863	189.246891926117	22.1084274591314	-3.0976012893963	4.41989455344394e-15	Down	1.40036915551936e-16	GO:0009507//chloroplast	GO:0008270//zinc ion binding	GO:1900865//chloroplast RNA modification	K03452//magnesium/proton exchanger;K17285//selenium-binding protein 1;K10683//BRCA1-associated RING domain protein 1;K11000//callose synthase [EC:2.4.1.-]	gi|723659151|ref|XP_010323176.1|//PREDICTED: pentatricopeptide repeat-containing protein At4g37380, chloroplastic [Solanum lycopersicum]
Solyc01g087960.2.1	1495	0.617952019109451	38.0654216037635	5.94484242261263	2.56023760310812e-05	Up	3.96327224008798e-06	NA	NA	NA	K16297//serine carboxypeptidase-like clade II [EC:3.4.16.-]	gi|969998179|ref|XP_015071486.1|//PREDICTED: serine carboxypeptidase-like 40 isoform X2 [Solanum pennellii]
Solyc05g044630.3.1	1206	2023.85280148414	249.180720704139	-3.02184000858416	2.94682513500028e-19	Down	5.90946743190007e-21	GO:0009570//chloroplast stroma	GO:0005506//iron ion binding;GO:0005488//binding;GO:0051536//iron-sulfur cluster binding	GO:0016226//iron-sulfur cluster assembly	K09571//FK506-binding protein 4/5 [EC:5.2.1.8]	gi|460388994|ref|XP_004240148.1|//PREDICTED: nifU-like protein 3, chloroplastic [Solanum lycopersicum]
Solyc09g090900.3.1	1922	1.27358004604287	48.1405147154389	5.24029002440324	2.06416868727054e-06	Up	2.57290147988396e-07	NA	NA	NA	K01703//3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]	gi|460404640|ref|XP_004247789.1|//PREDICTED: 3-isopropylmalate dehydratase large subunit [Solanum lycopersicum]
Solyc09g007560.3.1	864	4029.68707742757	1222.06072723659	-1.72135183357163	9.96453312013119e-05	Down	1.73714482640725e-05	GO:0030529//intracellular ribonucleoprotein complex	GO:0005198//structural molecule activity	GO:0010467//gene expression	K02931//large subunit ribosomal protein L5	gi|460402337|ref|XP_004246669.1|//PREDICTED: 50S ribosomal protein L5, chloroplastic [Solanum lycopersicum]
Solyc12g008360.2.1	3819	2635.13069876614	5578.87057175542	1.08209856237444	6.47121355390589e-06	Up	8.85727455268467e-07	GO:0044464//cell part	GO:0016758//transferase activity, transferring hexosyl groups	GO:0006464//cellular protein modification process	K07151//dolichyl-diphosphooligosaccharide--protein glycosyltransferase [EC:2.4.99.18]	gi|460412482|ref|XP_004251627.1|//PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit STT3A [Solanum lycopersicum]
Solyc01g094720.3.1	2586	4279.7643437722	400.899334764776	-3.41621943118663	1.4100855499801e-22	Down	2.02356842381965e-24	NA	NA	GO:0006810//transport	K08193//MFS transporter, ACS family, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), other	gi|723661174|ref|XP_010326478.1|//PREDICTED: probable anion transporter 2, chloroplastic [Solanum lycopersicum]
Solyc01g020230.3.1	2397	47.1956461034998	14.7485948736958	-1.67807626134973	0.0392757166127114	Down	0.0140732616593855	NA	GO:0005488//binding	NA	K10756//replication factor C subunit 3/5	gi|970003717|ref|XP_015062632.1|//PREDICTED: replication factor C subunit 3-like isoform X1 [Solanum pennellii];gi|970003719|ref|XP_015062633.1|//PREDICTED: replication factor C subunit 3-like isoform X2 [Solanum pennellii];gi|969995452|ref|XP_015064589.1|//PREDICTED: replication factor C subunit 3-like isoform X1 [Solanum pennellii]
Solyc11g011620.2.1	805	38.3952325196673	245.786518485509	2.67840669550112	2.23874768712824e-06	Up	2.80636218570608e-07	NA	NA	GO:0051234//establishment of localization	NA	gi|460409576|ref|XP_004250214.1|//PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 [Solanum lycopersicum]
Solyc12g094440.2.1	1224	316.525852350189	1.85810124990675	-7.41235040897473	1.3548381519695e-23	Down	1.7624814188063e-25	NA	NA	NA	K11446//histone demethylase JARID1 [EC:1.14.11.-];K09272//structure-specific recognition protein 1	gi|460415718|ref|XP_004253204.1|//PREDICTED: high mobility group B protein 9 [Solanum lycopersicum]
Solyc11g044255.1.1	1456	1020.9012026097	141.138454217417	-2.85466023705878	1.97888470635406e-05	Down	2.99104572993355e-06	NA	NA	NA	K11863//Ataxin-3 [EC:3.4.22.-]	gi|970062565|ref|XP_015058181.1|//PREDICTED: K(+) efflux antiporter 3, chloroplastic [Solanum pennellii]
Solyc06g062360.3.1	1671	433.241432435092	1003.98192142388	1.21249016632667	6.44648605558442e-05	Up	1.0829846672327e-05	GO:0044464//cell part	GO:0005515//protein binding	GO:0015031//protein transport	K08486//syntaxin 1B/2/3;K08488//syntaxin 7	gi|460392704|ref|XP_004241954.1|//PREDICTED: syntaxin-22-like [Solanum lycopersicum]
Solyc01g057780.3.1	3318	2031.66949371298	683.142931008221	-1.57240636363593	5.59616073802694e-06	Down	7.5594477838861e-07	NA	NA	NA	K14651//transcription initiation factor TFIID subunit 15;K15407//queuine tRNA-ribosyltransferase subunit QTRTD1 [EC:2.4.2.29];K02350//DNA polymerase zeta [EC:2.7.7.7]	gi|460366473|ref|XP_004229106.1|//PREDICTED: zinc finger protein VAR3, chloroplastic [Solanum lycopersicum]
Solyc06g083770.3.1	1686	918.222234311057	164.767191452463	-2.47841436587418	1.37112193164079e-06	Down	1.65282851011119e-07	NA	NA	NA	K07393//putative glutathione S-transferase	gi|460393550|ref|XP_004242372.1|//PREDICTED: glutathione S-transferase omega-like 2 [Solanum lycopersicum]
Solyc12g039170.1.1	237	57.2833186584629	10.2323293177783	-2.48498047444021	0.000570859310264189	Down	0.000119436160299422	NA	NA	NA	NA	NA
Solyc02g090640.3.1	1458	3.73661128748337	17.665023891198	2.24109330457922	0.0190922088382798	Up	0.00609814885698596	NA	NA	NA	NA	gi|460375688|ref|XP_004233636.1|//PREDICTED: patatin-like protein 1 [Solanum lycopersicum]
Solyc03g111730.3.1	3069	72.8681552031862	1536.48443245834	4.39820087293378	8.1639938600528e-27	Up	7.72944103344793e-29	GO:0031410//cytoplasmic vesicle	GO:0070011//peptidase activity, acting on L-amino acid peptides;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K16292//KDEL-tailed cysteine endopeptidase [EC:3.4.22.-]	gi|460381115|ref|XP_004236298.1|//PREDICTED: vignain-like [Solanum lycopersicum]
Solyc02g085250.3.1	2855	659.539514959161	285.372855752071	-1.20861098388354	0.0119361985600203	Down	0.00356510955201443	NA	GO:0003824//catalytic activity;GO:0016491//oxidoreductase activity	GO:0055114//oxidation-reduction process	K09835//prolycopene isomerase [EC:5.2.1.13]	gi|723672247|ref|XP_010316367.1|//PREDICTED: pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2 [Solanum lycopersicum];gi|698564189|ref|XP_009772913.1|//PREDICTED: pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2 [Nicotiana sylvestris];gi|225430760|ref|XP_002266788.1|//PREDICTED: pyridine nucleotide-disulfide oxidoreductase domain-containing protein 2 [Vitis vinifera]
Solyc01g008300.2.1	1523	7.86514649221716	95.1657443907113	3.59689681638188	7.86467997619985e-10	Up	5.49953020551324e-11	NA	NA	NA	K13065//shikimate O-hydroxycinnamoyltransferase [EC:2.3.1.133];K15400//omega-hydroxypalmitate O-feruloyl transferase [EC:2.3.1.188]	gi|723655351|ref|XP_010315215.1|//PREDICTED: BAHD acyltransferase At5g47980-like isoform X1 [Solanum lycopersicum];gi|723655354|ref|XP_010315218.1|//PREDICTED: BAHD acyltransferase At5g47980-like isoform X2 [Solanum lycopersicum]
Solyc06g054090.1.1	582	61.4108610733893	155.444263366749	1.33983163823803	0.0325267129987415	Up	0.01132275878542	NA	NA	NA	NA	gi|460390867|ref|XP_004241046.1|//PREDICTED: uncharacterized protein LOC101259756 [Solanum lycopersicum]
Solyc03g093690.3.1	1213	11263.090020054	5513.75122148628	-1.03049660395615	0.000486268210182118	Down	9.99072004817293e-05	NA	GO:0016671//oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	GO:0043170//macromolecule metabolic process	K07304//peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]	gi|723683113|ref|XP_004235188.2|//PREDICTED: peptide methionine sulfoxide reductase A1 [Solanum lycopersicum]
Solyc09g056340.3.1	789	204.767397942085	96.378847848061	-1.08719757508303	0.0175552994926195	Down	0.00553503571294038	NA	NA	NA	K07904//Ras-related protein Rab-11A	gi|460403089|ref|XP_004247033.1|//PREDICTED: ras-related protein RABA5b-like [Solanum lycopersicum]
Solyc02g092090.2.1	567	40.8380486890521	114.142357642717	1.48284842914012	0.00519895257557816	Up	0.00139546109183108	NA	NA	NA	K09060//plant G-box-binding factor	gi|723669661|ref|XP_010316032.1|//PREDICTED: basic leucine zipper 63 [Solanum lycopersicum]
Solyc01g108530.3.1	1425	392.966764249943	68.7639953778152	-2.51468202263373	4.85508364493073e-07	Down	5.3422569404486e-08	NA	NA	NA	K13258//2-hydroxyisoflavanone dehydratase [EC:4.2.1.105];K20506//tuliposide A-converting enzyme [EC:4.2.99.22]	gi|460369933|ref|XP_004230811.1|//PREDICTED: 2-hydroxyisoflavanone dehydratase-like [Solanum lycopersicum]
Solyc02g078250.3.1	1383	17.05296337102	0.518893491911464	-5.03844021313221	0.000812837925246699	Down	0.000176638031317588	NA	NA	NA	K11855//ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12];K11000//callose synthase [EC:2.4.1.-]	gi|460374147|ref|XP_004232873.1|//PREDICTED: CASP-like protein 1C1 [Solanum lycopersicum]
Solyc01g067510.3.1	2417	573.271117615649	18.6031144873548	-4.94560151631401	6.34996750403703e-15	Down	2.06158554346811e-16	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|723658030|ref|XP_010321146.1|//PREDICTED: serine/threonine-protein kinase-like protein ACR4 [Solanum lycopersicum];gi|970004351|ref|XP_015062968.1|//PREDICTED: proline-rich receptor-like protein kinase PERK14 [Solanum pennellii]
Solyc01g111800.3.1	1440	422.419255222878	183.345744344726	-1.20410881894865	0.00126539278988854	Down	0.000287387739257151	GO:0031224//intrinsic component of membrane	GO:0005275//amine transmembrane transporter activity	GO:0006865//amino acid transport	K03294//basic amino acid/polyamine antiporter, APA family;K13864//solute carrier family 7 (cationic amino acid transporter), member 2;K11584//serine/threonine-protein phosphatase 2A regulatory subunit B'	gi|723666444|ref|XP_010315394.1|//PREDICTED: probable polyamine transporter At1g31830 [Solanum lycopersicum]
Solyc12g094660.2.1	3585	482.464408168843	3595.2587882732	2.89760119769687	3.55222665400903e-08	Up	3.18439880083932e-09	NA	NA	NA	K13457//disease resistance protein RPM1	gi|723753706|ref|XP_004253120.2|//PREDICTED: putative inactive disease susceptibility protein LOV1 [Solanum lycopersicum]
Solyc11g011800.2.1	2029	23.0362462520367	113.993939845054	2.3069795753482	0.00145962119022392	Up	0.000336940287425701	NA	NA	NA	K20222//importin-5	gi|723742034|ref|XP_010312727.1|//PREDICTED: importin-5-like [Solanum lycopersicum]
Solyc01g095010.3.1	3504	446.287280056687	163.241279811743	-1.45096676144065	0.00029706640714693	Down	5.802251280192e-05	NA	NA	NA	K04718//sphingosine kinase [EC:2.7.1.91]	gi|460368110|ref|XP_004229912.1|//PREDICTED: sphingoid long-chain bases kinase 2, mitochondrial [Solanum lycopersicum]
Solyc08g082100.3.1	3032	595.189471971942	1330.02295444234	1.16003023232851	0.00950778315770549	Up	0.00276465694100419	NA	NA	NA	K14299//nucleoporin SEH1	gi|460400013|ref|XP_004245530.1|//PREDICTED: probable WRKY transcription factor 53 [Solanum lycopersicum];gi|723724056|ref|XP_004245531.2|//PREDICTED: LOW QUALITY PROTEIN: nucleoporin seh1 [Solanum lycopersicum]
BGI_novel_G000259	965	4834.45126400503	14.5026426540543	-8.38089252484525	6.16887163620088e-66	Down	2.98924002052376e-69	NA	NA	NA	NA	gi|460390510|ref|XP_004240874.1|//PREDICTED: uncharacterized protein LOC101258159 [Solanum lycopersicum]
BGI_novel_G000424	1793	1219.4713050696	556.97583088951	-1.1305691805062	0.0189283388688726	Down	0.00603381370234823	NA	GO:0008270//zinc ion binding;GO:0003676//nucleic acid binding	GO:0015074//DNA integration	K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6];K16570//gamma-tubulin complex component 3;K05658//ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:3.6.3.44]	gi|133711804|gb|ABO36622.1|//copia LTR rider [Solanum lycopersicum]
Solyc09g061620.3.1	1134	462.077582245585	2509.83177378416	2.44138366428015	2.91128106423479e-10	Up	1.89469835177946e-11	GO:0031224//intrinsic component of membrane	NA	GO:0006810//transport	K08511//vesicle-associated membrane protein 72	gi|460403227|ref|XP_004247095.1|//PREDICTED: vesicle-associated membrane protein 722 [Solanum lycopersicum]
Solyc08g074970.1.1	1446	24.1809881550872	314.193354539949	3.69970756013428	3.25070902939697e-05	Up	5.14845037494697e-06	NA	NA	NA	K06119//sulfoquinovosyltransferase [EC:2.4.1.-];K03857//phosphatidylinositol glycan, class A [EC:2.4.1.198]	gi|460401049|ref|XP_004246042.1|//PREDICTED: uncharacterized protein LOC101261544 [Solanum lycopersicum]
Solyc05g025890.2.1	1196	640.575234036632	7.40611833178984	-6.43450661093374	3.63782687344159e-41	Down	1.03054585649903e-43	NA	NA	NA	K20793;K18178//cytochrome c oxidase assembly factor 5	gi|460387302|ref|XP_004239318.1|//PREDICTED: uncharacterized protein LOC101263025 [Solanum lycopersicum]
Solyc09g010370.3.1	1172	832.238786855347	5662.96409741065	2.76648795082135	4.64213654392479e-16	Up	1.32543484145161e-17	NA	GO:0032561//guanyl ribonucleotide binding	GO:0006810//transport;GO:0035556//intracellular signal transduction	K07901//Ras-related protein Rab-8A	gi|460401936|ref|XP_004246471.1|//PREDICTED: ras-related protein RABE1a [Solanum lycopersicum]
Solyc03g119450.3.1	3797	2604.39635773177	700.994370285831	-1.89347426295443	2.16359354321139e-05	Down	3.30490768602962e-06	NA	NA	NA	K01148//poly(A)-specific ribonuclease [EC:3.1.13.4]	gi|460380026|ref|XP_004235759.1|//PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic [Solanum lycopersicum]
Solyc07g032385.1.1	2778	1569.12299503131	243.696528814049	-2.68680083503446	1.95739733816074e-11	Down	1.05355664093637e-12	NA	NA	NA	K17710//pentatricopeptide repeat domain-containing protein 1	gi|460395156|ref|XP_004243153.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g21222-like [Solanum lycopersicum]
Solyc09g061320.3.1	1589	313.276756868358	832.872757432932	1.41065836900821	0.00706759732158784	Up	0.00197870595953654	NA	NA	NA	K15289//solute carrier family 35, member F5	gi|460403217|ref|XP_004247090.1|//PREDICTED: uncharacterized vacuolar membrane protein YML018C [Solanum lycopersicum]
Solyc03g033980.3.1	1952	744.906954154632	1503.08691876015	1.01279630231777	3.53004091668784e-06	Up	4.58952688139526e-07	GO:0005929//cilium	GO:0035091//phosphatidylinositol binding	GO:0061512//protein localization to cilium	K19600//tubby-related protein 1	gi|460377546|ref|XP_004234552.1|//PREDICTED: tubby-like F-box protein 5 [Solanum lycopersicum]
Solyc10g050735.1.1	1992	162.499300465375	77.4018138355531	-1.06999422755202	0.0374314607124698	Down	0.0133049951302412	NA	NA	NA	NA	gi|460406581|ref|XP_004248741.1|//PREDICTED: sodium channel modifier 1 isoform X1 [Solanum lycopersicum]
Solyc05g009520.1.1	528	516.254960096679	2851.10297738504	2.46536450520879	1.59027454864153e-06	Up	1.94486759881201e-07	NA	NA	NA	NA	gi|460386506|ref|XP_004238939.1|//PREDICTED: uncharacterized protein LOC101257561 [Solanum lycopersicum]
Solyc10g079230.3.1	1665	31.2596210560729	0.444676826925859	-6.13539925450603	4.90312210326898e-06	Down	6.54833997913104e-07	NA	NA	NA	K06997//PLP dependent protein;K07393//putative glutathione S-transferase	gi|460408610|ref|XP_004249736.1|//PREDICTED: UPF0481 protein At3g47200 [Solanum lycopersicum]
Solyc03g007520.3.1	1237	1097.72127238922	3513.89238159824	1.6785582279435	7.84938140571801e-07	Up	8.97348023383672e-08	NA	NA	NA	NA	gi|970019173|ref|XP_015070780.1|//PREDICTED: uncharacterized protein LOC107015117 [Solanum pennellii]
BGI_novel_G000468	1778	69.7007101753459	8.27042441930789	-3.07514008345477	1.66790615314084e-07	Down	1.69103352338717e-08	NA	NA	NA	K10760//adenylate isopentenyltransferase (cytokinin synthase)	gi|970056525|ref|XP_015054869.1|//PREDICTED: uncharacterized protein LOC107001264 [Solanum pennellii]
Solyc10g083330.1.1	918	75.1890201641152	434.294436664419	2.53007956594673	4.53668992569495e-05	Up	7.34463102855934e-06	NA	NA	NA	NA	gi|460408004|ref|XP_004249438.1|//PREDICTED: uncharacterized protein LOC101257619 [Solanum lycopersicum]
Solyc03g111840.3.1	5835	18647.5756199368	4277.39265884405	-2.12418452135857	2.10328854718792e-07	Down	2.16851652062091e-08	GO:0009536//plastid	GO:0003676//nucleic acid binding	NA	K11294//nucleolin	gi|460381101|ref|XP_004236291.1|//PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Solanum lycopersicum]
Solyc02g091920.3.1	1550	1977.95248725792	44.8213927497774	-5.46367648217941	7.49604635925421e-14	Down	2.84999526108517e-15	NA	NA	NA	K08235//xyloglucan:xyloglucosyl transferase [EC:2.4.1.207]	gi|920500132|ref|NP_001234475.2|//xyloglucan endotransglucosylase-hydrolase XTH7 [Solanum lycopersicum]
Solyc06g009790.3.1	1765	281.538336748634	80.8365296721142	-1.80025209280963	0.0117747729167493	Down	0.00350987248454017	NA	GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds	GO:0044238//primary metabolic process;GO:0045229//external encapsulating structure organization	K01184//polygalacturonase [EC:3.2.1.15];K01213//galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]	gi|460389884|ref|XP_004240577.1|//PREDICTED: probable polygalacturonase [Solanum lycopersicum]
Solyc09g075320.1.1	597	278.157472599163	37.7353072491933	-2.88191493747925	1.04405727183261e-11	Down	5.40163818884624e-13	NA	NA	NA	K19040//E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:2.3.2.27];K19041//E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27];K10664//E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:2.3.2.27]	gi|723731809|ref|XP_010326655.1|//PREDICTED: RING-H2 finger protein ATL2-like [Solanum lycopersicum]
Solyc03g082560.3.1	2833	948.057851566444	217.833054878374	-2.12175220558843	3.57583683473527e-10	Down	2.36452010765632e-11	NA	NA	NA	K05275//pyridoxine 4-dehydrogenase [EC:1.1.1.65]	gi|460378493|ref|XP_004235005.1|//PREDICTED: pyridoxal reductase, chloroplastic [Solanum lycopersicum]
Solyc11g008480.2.1	1294	78.626522198631	2.93080276418702	-4.74564825605812	4.08416838279739e-08	Down	3.71454109662503e-09	NA	NA	NA	K11517//(S)-2-hydroxy-acid oxidase [EC:1.1.3.15];K02717//photosystem II oxygen-evolving enhancer protein 2	gi|460409272|ref|XP_004250063.1|//PREDICTED: psbP domain-containing protein 7, chloroplastic isoform X1 [Solanum lycopersicum]
Solyc02g092110.3.1	632	553.495669544598	4579.14328471692	3.04843377392819	1.47166214613935e-07	Up	1.47561173889774e-08	NA	NA	NA	NA	gi|807201070|ref|NP_001293109.1|//phytosulfokines 3 precursor [Solanum lycopersicum]
Solyc03g097570.3.1	1131	0.464782717927266	84.1407846881011	7.50010503653294	5.01473294770317e-10	Up	3.3926272178624e-11	NA	NA	NA	K15382//solute carrier family 50 (sugar transporter)	gi|723684251|ref|XP_004235342.2|//PREDICTED: uncharacterized protein LOC101265905 [Solanum lycopersicum]
Solyc12g088460.2.1	1670	270.057697157353	57.2024163721313	-2.23911967199999	1.3645511809879e-05	Down	1.98975854332216e-06	NA	NA	NA	K00517;K13260//isoflavone 2'-hydroxylase [EC:1.14.13.89]	gi|460414791|ref|XP_004252746.1|//PREDICTED: isoflavone 2'-hydroxylase-like [Solanum lycopersicum]
Solyc11g044250.2.1	4148	2928.2961834981	169.810983435083	-4.10805980182291	1.10727951084188e-10	Down	6.71516238310622e-12	NA	NA	NA	K11863//Ataxin-3 [EC:3.4.22.-]	gi|565387147|ref|XP_006359366.1|//PREDICTED: K(+) efflux antiporter 3, chloroplastic [Solanum tuberosum]
Solyc04g079820.3.1	1254	26.8072524730251	266.639289219565	3.31419410935868	4.73943396185597e-09	Up	3.73635859151833e-10	NA	GO:0016791//phosphatase activity	NA	K01106//inositol-1,4,5-trisphosphate 5-phosphatase [EC:3.1.3.56]	gi|460385044|ref|XP_004238215.1|//PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase 11 [Solanum lycopersicum]
Solyc05g053190.3.1	1713	441.331082827161	101.455707785689	-2.12101132770638	1.44955170401013e-08	Down	1.2248895605304e-09	NA	NA	NA	K06173//tRNA pseudouridine38-40 synthase [EC:5.4.99.12]	gi|460388482|ref|XP_004239896.1|//PREDICTED: tRNA pseudouridine synthase-like 1 isoform X1 [Solanum lycopersicum]
Solyc01g108240.3.1	1278	180.193084995612	2119.98813773065	3.55644063914996	1.24982147131328e-19	Up	2.42249576965448e-21	NA	NA	NA	K09286//EREBP-like factor	gi|460369893|ref|XP_004230791.1|//PREDICTED: ethylene-responsive transcription factor ERF109 [Solanum lycopersicum]
Solyc12g089320.2.1	3342	628.8767027988	1391.16897351188	1.1454485664802	0.00133904930050565	Up	0.000306212444408907	NA	NA	NA	NA	gi|460414975|ref|XP_004252836.1|//PREDICTED: dentin sialophosphoprotein [Solanum lycopersicum]
Solyc06g071160.3.1	2551	593.219711813335	2270.16775234139	1.93616046599857	1.19510334428788e-08	Up	9.98740755141431e-10	GO:0016020//membrane	GO:0008378//galactosyltransferase activity	NA	K20843	gi|460391906|ref|XP_004241559.1|//PREDICTED: probable beta-1,3-galactosyltransferase 19 [Solanum lycopersicum]
Solyc01g094240.3.1	1217	0.620113367752962	7.49869663131266	3.59603596364469	0.0386744230376246	Up	0.0138102345571956	NA	GO:0016616//oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	GO:0008152//metabolic process;GO:0006950//response to stress	K15095//(+)-neomenthol dehydrogenase [EC:1.1.1.208]	gi|723666720|ref|XP_004229931.2|//PREDICTED: uncharacterized protein LOC101261456 [Solanum lycopersicum]
Solyc11g007130.2.1	1927	3986.69215772545	189.558037525287	-4.39448067317688	3.08519069619801e-13	Down	1.2730379084133e-14	GO:0044464//cell part;GO:0016021//integral component of membrane	GO:0005215//transporter activity	GO:0006810//transport;GO:0055085//transmembrane transport	NA	gi|723740889|ref|XP_010312533.1|//PREDICTED: hippocampus abundant transcript-like protein 1 [Solanum lycopersicum]
Solyc05g007830.3.1	896	3611.90982804054	195.74209104906	-4.20573595436054	1.60156980792181e-15	Down	4.84148320495224e-17	NA	NA	NA	K20628	gi|970030211|ref|XP_015076393.1|//PREDICTED: expansin-A1 [Solanum pennellii]
Solyc03g120530.3.1	2187	222.197028602149	68.2237145137285	-1.70349431268441	5.48341972296989e-05	Down	9.0627266481469e-06	NA	NA	NA	K16189//phytochrome-interacting factor 4;K06664//peroxin-2;K05765//cofilin;K12126//phytochrome-interacting factor 3;K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460379874|ref|XP_004235685.1|//PREDICTED: transcription factor bHLH68 [Solanum lycopersicum]
Solyc01g006880.3.1	7851	1059.43342826555	449.592711310809	-1.23660238353668	0.00472044220706073	Down	0.00125295470987325	NA	NA	NA	K11422//histone-lysine N-methyltransferase SETD1 [EC:2.1.1.43]	gi|723655656|ref|XP_010315766.1|//PREDICTED: uncharacterized protein LOC101263241 [Solanum lycopersicum]
BGI_novel_G000144	6359	774.769634730828	181.570649556006	-2.09323639860876	8.06388672989161e-06	Down	1.12989953409007e-06	NA	NA	NA	K13024//inositol-hexakisphosphate/diphosphoinositol-pentakisphosphate 1-kinase [EC:2.7.4.24];K01191//alpha-mannosidase [EC:3.2.1.24];K12819//pre-mRNA-processing factor SLU7;K13356//alcohol-forming fatty acyl-CoA reductase [EC:1.2.1.84];K08247//methionine S-methyltransferase [EC:2.1.1.12]	gi|970056525|ref|XP_015054869.1|//PREDICTED: uncharacterized protein LOC107001264 [Solanum pennellii]
Solyc03g112060.3.1	3056	2550.10420712879	1019.12258297183	-1.32322860897593	0.0215118298441586	Down	0.00700730136454831	NA	NA	NA	K03517//quinolinate synthase [EC:2.5.1.72]	gi|460381073|ref|XP_004236277.1|//PREDICTED: quinolinate synthase, chloroplastic [Solanum lycopersicum]
Solyc08g077360.3.1	2411	27.0005844484382	61.3244518196132	1.1834717967044	0.0152429967816187	Up	0.00471301097001369	NA	GO:0032561//guanyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity	GO:0009207//purine ribonucleoside triphosphate catabolic process	K01528//dynamin GTPase [EC:3.6.5.5]	gi|460400675|ref|XP_004245858.1|//PREDICTED: dynamin-related protein 1E-like [Solanum lycopersicum]
Solyc03g115930.2.1	543	139.965529733927	1117.23663368749	2.99679131115358	8.12727506381743e-06	Up	1.13996332433074e-06	NA	NA	NA	K02183//calmodulin	gi|460380584|ref|XP_004236035.1|//PREDICTED: probable calcium-binding protein CML30 [Solanum lycopersicum]
Solyc01g087750.3.1	1599	5068.72434320531	1110.28159262241	-2.19069708353141	8.62324510104014e-10	Down	6.05890003558248e-11	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K07562//nonsense-mediated mRNA decay protein 3;K00858//NAD+ kinase [EC:2.7.1.23]	gi|460367603|ref|XP_004229662.1|//PREDICTED: uncharacterized protein LOC101256709 [Solanum lycopersicum]
Solyc04g054500.3.1	978	142.072458047458	488.333032144596	1.78123846600377	0.00811581455583287	Up	0.00230908053170837	NA	GO:0043169//cation binding	GO:0006812//cation transport	K07213//copper chaperone;K10752//histone-binding protein RBBP4	gi|460383420|ref|XP_004237423.1|//PREDICTED: heavy metal-associated isoprenylated plant protein 26 [Solanum lycopersicum]
Solyc01g109330.3.1	1839	27.5922139130248	118.858575437854	2.10691287116345	0.000110106348676206	Up	1.94290835930058e-05	NA	NA	NA	K07399//cytochrome c biogenesis protein	gi|460370024|ref|XP_004230855.1|//PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic isoform X1 [Solanum lycopersicum];gi|460370026|ref|XP_004230856.1|//PREDICTED: cytochrome c biogenesis protein CCS1, chloroplastic isoform X2 [Solanum lycopersicum]
Solyc05g007900.2.1	768	107.184798167567	528.448328682733	2.30166210737638	1.55504865259241e-07	Up	1.56733694521018e-08	NA	NA	NA	K11982//E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]	gi|460386272|ref|XP_004238823.1|//PREDICTED: E3 ubiquitin-protein ligase RING1-like [Solanum lycopersicum]
Solyc09g065000.3.1	1294	119.143668493782	305.12713151117	1.35670818201579	0.00278231015024297	Up	0.000691717474379438	NA	NA	NA	K00924	gi|460403350|ref|XP_004247154.1|//PREDICTED: basic 7S globulin-like [Solanum lycopersicum]
Solyc08g066875.1.1	2733	1173.67244750208	4149.46602966008	1.82189586409414	0.000464362957877951	Up	9.49219644029626e-05	GO:0005634//nucleus;GO:0005737//cytoplasm	GO:0005524//ATP binding;GO:0004674//protein serine/threonine kinase activity;GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process;GO:0018105//peptidyl-serine phosphorylation;GO:0006897//endocytosis;GO:0016055//Wnt signaling pathway;GO:0008360//regulation of cell shape	K08960//casein kinase 1, epsilon [EC:2.7.11.1];K08959//casein kinase 1, delta [EC:2.7.11.1]	gi|970048097|ref|XP_015085595.1|//PREDICTED: casein kinase I-like [Solanum pennellii];gi|697174400|ref|XP_009596128.1|//PREDICTED: casein kinase I-like [Nicotiana tomentosiformis]
Solyc07g056170.3.1	2733	163.853707374284	384.194566557014	1.22942880009406	0.00212283671935175	Up	0.000510294244934375	GO:0005618//cell wall	GO:0004175//endopeptidase activity;GO:0004252//serine-type endopeptidase activity;GO:0005515//protein binding	GO:0044092//negative regulation of molecular function;GO:0006508//proteolysis;GO:0019538//protein metabolic process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13199//plasminogen activator inhibitor 1 RNA-binding protein;K12663//Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase [EC:5.3.3.-];K01183//chitinase [EC:3.2.1.14]	gi|698525703|ref|XP_009759675.1|//PREDICTED: subtilisin-like protease SBT5.3 isoform X1 [Nicotiana sylvestris];gi|460395290|ref|XP_004243217.1|//PREDICTED: subtilisin-like protease SBT5.3 [Solanum lycopersicum]
Solyc04g072640.3.1	1538	303.071809033747	1227.37019506534	2.01783888755725	0.000112079358305223	Up	1.98190128149686e-05	NA	NA	NA	NA	gi|460384355|ref|XP_004237877.1|//PREDICTED: membrane-anchored ubiquitin-fold protein 3 isoform X2 [Solanum lycopersicum]
Solyc11g019950.2.1	1977	302.22630488322	729.425428559626	1.27113126058603	0.00238124862608348	Up	0.000580400505664227	NA	GO:0016454//C-palmitoyltransferase activity;GO:0048037//cofactor binding	GO:0008152//metabolic process	K00654//serine palmitoyltransferase [EC:2.3.1.50]	gi|460409965|ref|XP_004250406.1|//PREDICTED: long chain base biosynthesis protein 1 [Solanum lycopersicum]
Solyc11g008000.2.1	2178	1999.98204204147	4031.44963777543	1.01131165357701	0.0217305286985444	Up	0.00708988063584161	NA	NA	NA	K12581//CCR4-NOT transcription complex subunit 7/8;K02437//glycine cleavage system H protein;K03094//S-phase kinase-associated protein 1;K13126//polyadenylate-binding protein;K05941//glutathione gamma-glutamylcysteinyltransferase [EC:2.3.2.15];K01054//acylglycerol lipase [EC:3.1.1.23]	gi|460409202|ref|XP_004250028.1|//PREDICTED: NAC domain-containing protein 78 [Solanum lycopersicum]
Solyc08g005310.3.1	3925	561.53130196618	118.102741482676	-2.24932399240985	4.95944543476351e-10	Down	3.35152623126071e-11	NA	NA	NA	K04630//guanine nucleotide-binding protein G(i) subunit alpha;K19729//guanine nucleotide-binding protein G(t) subunit alpha 3	gi|460397716|ref|XP_004244413.1|//PREDICTED: extra-large guanine nucleotide-binding protein 3-like [Solanum lycopersicum]
Solyc03g122360.3.1	1817	209.199033475741	53.3007118805306	-1.97264947942017	0.0467245492812309	Down	0.0172909395133465	NA	NA	NA	K07410//cytochrome P450, family 1, subfamily B, polypeptide 1 [EC:1.14.14.1];K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30];K05280//flavonoid 3'-monooxygenase [EC:1.14.13.21]	gi|460379596|ref|XP_004235547.1|//PREDICTED: cytochrome P450 71A1-like [Solanum lycopersicum]
Solyc09g065390.1.1	555	126.243149038109	14.4047053734631	-3.13159304006972	9.13652167854427e-05	Down	1.58087571312817e-05	NA	NA	NA	NA	gi|460403400|ref|XP_004247179.1|//PREDICTED: uncharacterized protein LOC101260079 [Solanum lycopersicum]
Solyc01g087540.3.1	1567	1786.30725659383	500.15121484269	-1.83654400699341	0.000329750113111858	Down	6.509455043389e-05	NA	NA	NA	K03097//casein kinase II subunit alpha [EC:2.7.11.1]	gi|460367572|ref|XP_004229647.1|//PREDICTED: uncharacterized protein LOC101251618 [Solanum lycopersicum]
Solyc07g056190.3.1	1019	373.481924129705	2104.53324082983	2.49438997113386	0.00720832714579256	Up	0.00202509175852984	NA	NA	NA	NA	gi|460395288|ref|XP_004243216.1|//PREDICTED: uncharacterized protein LOC101251303 [Solanum lycopersicum]
Solyc03g083020.3.1	1216	839.395286603838	382.10048159804	-1.13539828612047	0.0468989113362302	Down	0.0173704154961416	NA	NA	NA	K15902//EKC/KEOPS complex subunit PCC1/LAGE3	gi|460378432|ref|XP_004234976.1|//PREDICTED: uncharacterized protein LOC101260703 isoform X1 [Solanum lycopersicum]
Solyc01g102960.3.1	570	232.787980704109	1.50361351185861	-7.27443897581354	1.28457344285653e-12	Down	5.80327647510851e-14	NA	NA	NA	K13993//HSP20 family protein	gi|460369115|ref|XP_004230409.1|//PREDICTED: 22.7 kDa class IV heat shock protein-like [Solanum lycopersicum]
Solyc12g006990.2.1	2979	1474.86075278863	3377.92156869169	1.19555708029081	0.0339667209827599	Up	0.0118873394702226	GO:0005829//cytosol	GO:0005525//GTP binding;GO:0005096//GTPase activator activity;GO:0003924//GTPase activity	GO:0008152//metabolic process;GO:0006913//nucleocytoplasmic transport;GO:0043547//positive regulation of GTPase activity;GO:0009615//response to virus	K12486//stromal membrane-associated protein;K15044//Arf-GAP domain and FG repeats-containing protein 1	gi|460412412|ref|XP_004251595.1|//PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD14 [Solanum lycopersicum]
Solyc02g068710.3.1	7901	950.283039071257	369.522408167155	-1.36269542668623	0.000199324191394514	Down	3.74754443638708e-05	NA	NA	NA	K05750//NCK-associated protein 1	gi|970010446|ref|XP_015066117.1|//PREDICTED: protein NAP1 [Solanum pennellii]
Solyc06g066110.1.1	453	1.43817462300925	24.6402103913641	4.09870381118804	0.000102114094415981	Up	1.78475096435267e-05	NA	NA	NA	NA	gi|460392332|ref|XP_004241770.1|//PREDICTED: uncharacterized protein LOC101260148 [Solanum lycopersicum]
Solyc06g048730.3.1	2320	3689.60577129784	1222.38546058308	-1.59376738603049	3.0665060257194e-05	Down	4.82242020370887e-06	GO:0009536//plastid	GO:0016831//carboxy-lyase activity	GO:0006779//porphyrin-containing compound biosynthetic process	K01599//uroporphyrinogen decarboxylase [EC:4.1.1.37]	gi|970035896|ref|XP_015079286.1|//PREDICTED: uroporphyrinogen decarboxylase, chloroplastic [Solanum pennellii]
Solyc01g098730.2.1	950	538.285321728379	2168.91242665554	2.01052881226839	1.26407495162371e-05	Up	1.82808642432842e-06	NA	NA	NA	K10664//E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:2.3.2.27]	gi|460368640|ref|XP_004230173.1|//PREDICTED: E3 ubiquitin-protein ligase ATL6 [Solanum lycopersicum]
BGI_novel_G000178	3335	5.36499309749918	59.593994555821	3.47351873387297	0.00021856721705017	Up	4.14436943914648e-05	NA	GO:0003676//nucleic acid binding	GO:0015074//DNA integration	K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6];K16570//gamma-tubulin complex component 3	gi|225016149|gb|ACN78973.1|//copia-type polyprotein [Glycine max]
Solyc03g120910.3.1	3945	494.132799358649	184.530277962557	-1.421041266681	0.0467808563382762	Down	0.0173170077641054	GO:0043231//intracellular membrane-bounded organelle;GO:0005634//nucleus	GO:0008289//lipid binding;GO:0003677//DNA binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0006351//transcription, DNA-templated	K09338//homeobox-leucine zipper protein	gi|460379804|ref|XP_004235650.1|//PREDICTED: homeobox-leucine zipper protein ATHB-15 [Solanum lycopersicum]
Solyc10g086410.3.1	2329	1256.63039351784	80355.0936923408	5.99875719442593	2.92025504497554e-52	Up	3.15667945073396e-55	NA	GO:0032559//adenyl ribonucleotide binding	GO:0050896//response to stimulus	K03283//heat shock 70kDa protein 1/8	gi|460408280|ref|XP_004249574.1|//PREDICTED: heat shock cognate 70 kDa protein 2 [Solanum lycopersicum]
Solyc01g090230.3.1	2251	579.73741665784	1338.02712655843	1.2066358585487	0.00127549216373677	Up	0.000289966702945825	NA	NA	NA	NA	gi|460367774|ref|XP_004229745.1|//PREDICTED: GRAM domain-containing protein 1A [Solanum lycopersicum]
Solyc12g089090.2.1	2653	730.827725454947	1676.50819501453	1.19785626352702	2.06328050353601e-06	Up	2.57025624079967e-07	NA	GO:0003824//catalytic activity	NA	K17508//protein phosphatase PTC7 [EC:3.1.3.16]	gi|460414870|ref|XP_004252785.1|//PREDICTED: probable protein phosphatase 2C 55 [Solanum lycopersicum]
Solyc03g111710.3.1	2075	197.04848114818	1228.10822675212	2.63981516915335	2.71570785508295e-14	Up	9.70763319302425e-16	NA	NA	NA	K00517	gi|460381121|ref|XP_004236301.1|//PREDICTED: BTB/POZ and TAZ domain-containing protein 1 [Solanum lycopersicum]
Solyc05g055120.3.1	932	363.114858273017	970.332847202705	1.41805374595647	6.42988834001193e-05	Up	1.07971697374958e-05	NA	NA	NA	K14317//nuclear pore complex protein Nup214	gi|460389091|ref|XP_004240192.1|//PREDICTED: uncharacterized protein DDB_G0274915-like [Solanum lycopersicum]
Solyc03g082950.3.1	804	22.5558599109994	2.92862442539557	-2.94520719272729	0.0244547325465635	Down	0.00813456214572584	NA	NA	NA	NA	gi|723682291|ref|XP_010318034.1|//PREDICTED: uncharacterized protein LOC101263194 [Solanum lycopersicum]
Solyc12g008970.2.1	2138	702.625186710757	1772.66760040612	1.33509483811881	0.000616357322709949	Up	0.000130139568014734	GO:0016021//integral component of membrane;GO:0005789//endoplasmic reticulum membrane	GO:0004144//diacylglycerol O-acyltransferase activity	GO:0019432//triglyceride biosynthetic process	K11155//diacylglycerol O-acyltransferase 1 [EC:2.3.1.20 2.3.1.75 2.3.1.76]	gi|460412582|ref|XP_004251677.1|//PREDICTED: diacylglycerol O-acyltransferase 1-like isoform X1 [Solanum lycopersicum];gi|723747743|ref|XP_010313759.1|//PREDICTED: diacylglycerol O-acyltransferase 1-like isoform X2 [Solanum lycopersicum]
Solyc12g010900.1.1	2169	275.155279067402	560.019747653106	1.02523169283377	0.0233005562779517	Up	0.00769158067681304	NA	NA	NA	K10268//F-box and leucine-rich repeat protein 2/20	gi|460412841|ref|XP_004251806.1|//PREDICTED: F-box/LRR-repeat MAX2 homolog A-like [Solanum lycopersicum]
Solyc05g010100.3.1	1679	1254.13991237516	623.731115543708	-1.00770216845691	0.0133029516984783	Down	0.00403283532740881	NA	NA	NA	K11991//tRNA(adenine34) deaminase [EC:3.5.4.33]	gi|723698149|ref|XP_010320790.1|//PREDICTED: LOW QUALITY PROTEIN: tRNA(adenine(34)) deaminase, chloroplastic [Solanum lycopersicum]
Solyc02g077090.3.1	2247	817.847449054472	257.955807529112	-1.66470783892832	0.00987249244248038	Down	0.00288285022343787	NA	NA	NA	K05747//Wiskott-Aldrich syndrome protein	gi|723675033|ref|XP_010316803.1|//PREDICTED: protein CHUP1, chloroplastic [Solanum lycopersicum]
Solyc09g089800.2.1	1107	0.465030729331598	7.74775625293914	4.0583806088909	0.0135000913878512	Up	0.00410366949708985	NA	NA	NA	K06892//feruloyl-CoA ortho-hydroxylase [EC:1.14.11.-];K13229//2,4-dihydroxy-1,4-benzoxazin-3-one-glucoside dioxygenase [EC:1.14.20.2]	gi|460404910|ref|XP_004247921.1|//PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like [Solanum lycopersicum]
Solyc10g079130.2.1	3712	1645.93472060743	11356.0927370088	2.78648751237146	2.86505563662911e-14	Up	1.02842126810565e-15	NA	GO:0046872//metal ion binding;GO:0004674//protein serine/threonine kinase activity;GO:0032559//adenyl ribonucleotide binding	GO:0006464//cellular protein modification process	K13412//calcium-dependent protein kinase [EC:2.7.11.1]	gi|460407510|ref|XP_004249195.1|//PREDICTED: calcium-dependent protein kinase 32-like [Solanum lycopersicum]
BGI_novel_G000081	279	11.7303250747937	0.71326542384575	-4.03966014478044	0.00260405626247628	Down	0.000641889968083929	NA	NA	NA	K07466//replication factor A1	gi|723668359|ref|XP_010315728.1|//PREDICTED: replication protein A 70 kDa DNA-binding subunit B-like [Solanum lycopersicum]
Solyc08g082440.3.1	2190	533.999810260524	2917.10125460082	2.44962432963649	1.52868925550124e-11	Up	8.0913178127768e-13	NA	GO:0016857//racemase and epimerase activity, acting on carbohydrates and derivatives;GO:0048037//cofactor binding;GO:0003978//UDP-glucose 4-epimerase activity	GO:0006012//galactose metabolic process;GO:0019318//hexose metabolic process	K01784//UDP-glucose 4-epimerase [EC:5.1.3.2]	gi|723723962|ref|XP_010325352.1|//PREDICTED: UDP-glucose 4-epimerase GEPI48 isoform X2 [Solanum lycopersicum];gi|460399972|ref|XP_004245510.1|//PREDICTED: UDP-glucose 4-epimerase GEPI48 isoform X1 [Solanum lycopersicum]
Solyc04g007790.3.1	816	5540.41331845882	1945.98073389478	-1.50949617943861	2.08756587110403e-06	Down	2.60362136749444e-07	NA	NA	GO:0006950//response to stress	NA	gi|460382589|ref|XP_004237021.1|//PREDICTED: kirola-like [Solanum lycopersicum]
Solyc12g009370.2.1	345	65.4661399618526	6.78917190944563	-3.26944139517172	0.00153294106170733	Down	0.000355693980510218	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K17535//serine/threonine-protein kinase TNNI3K [EC:2.7.11.1];K04365//B-Raf proto-oncogene serine/threonine-protein kinase [EC:2.7.11.1]	gi|460413388|ref|XP_004252071.1|//PREDICTED: serine/threonine-protein kinase HT1-like [Solanum lycopersicum]
Solyc08g080890.3.1	2991	78.4005915680906	11.017395913574	-2.83108127329765	0.00214441199834537	Down	0.000516040102181218	GO:0016020//membrane	GO:0046873//metal ion transmembrane transporter activity;GO:0046872//metal ion binding;GO:0015662//ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism;GO:0000166//nucleotide binding	GO:0008152//metabolic process;GO:0009987//cellular process;GO:0006825//copper ion transport	K17686//Cu+-exporting ATPase [EC:3.6.3.54]	gi|971544444|ref|XP_015162639.1|//PREDICTED: probable copper-transporting ATPase HMA5 isoform X2 [Solanum tuberosum];gi|723724391|ref|XP_010325412.1|//PREDICTED: probable copper-transporting ATPase HMA5 isoform X1 [Solanum lycopersicum]
Solyc04g082270.3.1	1259	138.632215185235	412.045024073631	1.57153944085795	0.0297712622268091	Up	0.0102082093791717	NA	NA	NA	NA	gi|460385447|ref|XP_004238415.1|//PREDICTED: uncharacterized protein LOC101254897 [Solanum lycopersicum]
Solyc06g066050.3.1	1154	277.031429534453	896.698749382971	1.69457372465361	5.60067096841595e-10	Up	3.81825972910122e-11	NA	NA	NA	NA	gi|723709465|ref|XP_010322715.1|//PREDICTED: uncharacterized protein LOC101261629 isoform X2 [Solanum lycopersicum];gi|460392342|ref|XP_004241775.1|//PREDICTED: uncharacterized protein LOC101261629 isoform X1 [Solanum lycopersicum]
Solyc08g080050.3.1	1377	15779.1460369168	1508.77012457989	-3.3865742097364	6.26860538324839e-28	Down	5.23396304550335e-30	NA	NA	NA	NA	gi|460400289|ref|XP_004245668.1|//PREDICTED: PGR5-like protein 1A, chloroplastic [Solanum lycopersicum]
Solyc07g005660.3.1	1489	418.822338813609	107.589013069907	-1.96080763544192	0.00297501724785502	Down	0.000745085018948035	NA	NA	NA	NA	gi|460394011|ref|XP_004242599.1|//PREDICTED: probable purine permease 5 isoform X1 [Solanum lycopersicum]
Solyc01g005400.3.1	2075	72.0454266471146	220.936796419483	1.61665495766314	0.000776832998672343	Up	0.00016817675772659	NA	NA	NA	K17991//peroxygenase [EC:1.11.2.3]	gi|460365629|ref|XP_004228703.1|//PREDICTED: probable peroxygenase 5 [Solanum lycopersicum]
Solyc04g056746.1.1	2217	41.6163672050614	9.92422749223321	-2.0681243226757	0.0133754539522568	Down	0.00405830457624013	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial	gi|460383751|ref|XP_004237581.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g01110 [Solanum lycopersicum]
Solyc02g086740.1.1	561	4191.42982394811	667.202666202645	-2.65124551591225	0.000209228068965905	Down	3.95664252257105e-05	GO:0030529//intracellular ribonucleoprotein complex;GO:0009536//plastid	GO:0005198//structural molecule activity	GO:0010467//gene expression	K02935//large subunit ribosomal protein L7/L12	gi|460372985|ref|XP_004232303.1|//PREDICTED: 50S ribosomal protein L12, chloroplastic-like [Solanum lycopersicum]
Solyc05g041360.2.1	429	91.4868919905322	34.4119085173086	-1.41065714498454	0.0492918793467487	Down	0.0183971815975472	GO:0009536//plastid	GO:0003676//nucleic acid binding	GO:0006396//RNA processing;GO:0006399//tRNA metabolic process	K20000//maturase K	gi|813424249|ref|YP_009132026.1|//maturase K (chloroplast) [Solanum neorickii]
Solyc10g076480.2.1	1817	165.357736191194	3128.84962163151	4.24196987352832	8.51803728520268e-11	Up	5.08008783969147e-12	NA	NA	NA	K03320//ammonium transporter, Amt family	gi|460407252|ref|XP_004249068.1|//PREDICTED: ammonium transporter 2 [Solanum lycopersicum]
Solyc05g032880.3.1	1291	778.933815461072	382.99534928601	-1.02417387680943	0.000882123343484982	Down	0.000193634425592033	GO:0005622//intracellular	NA	NA	K02939//large subunit ribosomal protein L9	gi|970026713|ref|XP_015074672.1|//PREDICTED: 50S ribosomal protein L9 [Solanum pennellii]
Solyc06g069450.3.1	2846	642.437934303239	100.663205923501	-2.67402063213656	3.70628106465871e-09	Down	2.86876051263037e-10	NA	NA	NA	K17618//ubiquitin-like domain-containing CTD phosphatase 1 [EC:3.1.3.16]	gi|723708690|ref|XP_010322580.1|//PREDICTED: uncharacterized protein LOC101261530 [Solanum lycopersicum]
Solyc11g073120.2.1	1182	1385.98980975409	50.3202845454456	-4.78363275989893	8.17935903465195e-14	Down	3.13722992644135e-15	NA	NA	NA	K09422//myb proto-oncogene protein, plant	gi|460411832|ref|XP_004251308.1|//PREDICTED: transcription factor MYB48 [Solanum lycopersicum]
Solyc11g069780.2.1	2899	359.106708964576	1106.04577235454	1.62292657965152	9.66591857435282e-06	Up	1.37127203272651e-06	NA	NA	NA	K05715//2-phosphoglycerate kinase [EC:2.7.2.-]	gi|460411523|ref|XP_004251159.1|//PREDICTED: uncharacterized protein LOC101266299 [Solanum lycopersicum]
Solyc09g065440.3.1	1242	34.1794061304329	1.40654945570734	-4.60289514502489	0.000228606745845729	Down	4.34751609253359e-05	NA	NA	NA	NA	gi|460403408|ref|XP_004247183.1|//PREDICTED: leucine-rich repeat extensin-like protein 5 [Solanum lycopersicum]
Solyc10g076290.2.1	2908	159.436950781999	421.784149265133	1.40351885524008	0.00381199350369115	Up	0.00098724209272574	NA	NA	NA	K10268//F-box and leucine-rich repeat protein 2/20	gi|460407232|ref|XP_004249058.1|//PREDICTED: F-box/LRR-repeat protein 3 [Solanum lycopersicum]
Solyc08g077170.3.1	3302	48.3884876952983	9.94093261287753	-2.28321074048941	0.0468433971266461	Down	0.0173436507998724	GO:0044464//cell part	NA	GO:0015833//peptide transport	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460400713|ref|XP_004245877.1|//PREDICTED: protein NRT1/ PTR FAMILY 7.3 [Solanum lycopersicum]
Solyc12g006970.1.1	213	239.126514773998	102.765018273744	-1.21842486002448	0.0224906607942218	Down	0.00738147712438956	NA	NA	NA	NA	NA
Solyc10g084300.1.1	795	204.616948800487	489.351813560833	1.25794639519805	0.00256041914981415	Up	0.000630560955823099	NA	GO:0005515//protein binding	GO:0044267//cellular protein metabolic process	K09510//DnaJ homolog subfamily B member 4	gi|849536176|ref|NP_001233892.2|//DnaJ like protein [Solanum lycopersicum]
Solyc03g098020.3.1	2025	3807.62129349112	921.40554369322	-2.04698181200038	4.02154192864467e-08	Down	3.65008744455411e-09	NA	NA	NA	K01054//acylglycerol lipase [EC:3.1.1.23]	gi|460379236|ref|XP_004235370.1|//PREDICTED: monoglyceride lipase [Solanum lycopersicum]
Solyc02g091430.3.1	4426	331.188511280792	847.152075643816	1.35496834920964	5.70178800367038e-05	Up	9.44488813490053e-06	NA	NA	NA	K08332//vacuolar protein 8	gi|460372345|ref|XP_004231991.1|//PREDICTED: U-box domain-containing protein 2 isoform X1 [Solanum lycopersicum]
Solyc06g036590.1.1	660	59.5646523698388	21.4776415755932	-1.47162085972002	0.0315950361237913	Down	0.0109489731192369	NA	NA	NA	K12843//U4/U6 small nuclear ribonucleoprotein PRP3	gi|723705014|ref|XP_010321975.1|//PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp3-like [Solanum lycopersicum]
Solyc03g063060.3.1	1349	195.834353856689	92.0457119650872	-1.08921145011896	0.00842134575107458	Down	0.00240542614024469	NA	NA	NA	NA	gi|460378097|ref|XP_004234815.1|//PREDICTED: ycf20-like protein [Solanum lycopersicum]
Solyc09g007445.1.1	672	82.6456625319523	220.30711923878	1.41450510649876	0.0041704876265926	Up	0.00109127863197704	NA	NA	NA	K07252//dolichyldiphosphatase [EC:3.6.1.43]	gi|460402356|ref|XP_004246678.1|//PREDICTED: lipid phosphate phosphatase gamma, chloroplastic [Solanum lycopersicum]
Solyc12g057060.2.1	1738	332.951943891782	8117.72235529304	4.60768912914428	1.2991318373293e-13	Up	5.08941240880085e-15	NA	GO:0016757//transferase activity, transferring glycosyl groups	NA	K00699//glucuronosyltransferase [EC:2.4.1.17];K13030//cyanohydrin beta-glucosyltransferase [EC:2.4.1.85]	gi|460414347|ref|XP_004252533.1|//PREDICTED: 7-deoxyloganetin glucosyltransferase-like [Solanum lycopersicum]
Solyc12g040450.2.1	1076	14.6587197052115	2.68414438791508	-2.44922491828113	0.0239066533891103	Down	0.00792462608429096	NA	NA	NA	K00423//L-ascorbate oxidase [EC:1.10.3.3]	gi|971587458|ref|XP_015161102.1|//PREDICTED: uncharacterized protein LOC107059167 [Solanum tuberosum]
Solyc07g066080.3.1	810	530.338448608314	1798.48402908827	1.76179609785297	0.000262363045408621	Up	5.06477639843167e-05	NA	GO:0016879//ligase activity, forming carbon-nitrogen bonds;GO:0032559//adenyl ribonucleotide binding	GO:0006464//cellular protein modification process	K06689//ubiquitin-conjugating enzyme E2 D [EC:2.3.2.23]	gi|460396894|ref|XP_004244005.1|//PREDICTED: ubiquitin-conjugating enzyme E2 28 [Solanum lycopersicum]
Solyc09g074350.1.1	510	12.978784420932	116.935119869378	3.17148111523815	2.69781016875824e-09	Up	2.04336896634738e-10	NA	NA	NA	NA	gi|565401787|ref|XP_006366376.1|//PREDICTED: transcription initiation factor TFIID subunit 11 [Solanum tuberosum]
Solyc05g009405.1.1	2560	31.446627405619	86.249364325431	1.45560852492888	0.0206687596825495	Up	0.00669107566135911	NA	NA	NA	K01074//palmitoyl-protein thioesterase [EC:3.1.2.22];K19090//CRISPR-associated protein Cas5t;K19589//release factor glutamine methyltransferase [EC:2.1.1.297];K03452//magnesium/proton exchanger	gi|971544769|ref|XP_015162742.1|//PREDICTED: pentatricopeptide repeat-containing protein At3g29230 [Solanum tuberosum]
Solyc03g116900.3.1	2053	1096.0340906018	3058.26758987851	1.4804219720107	0.0483642383700673	Up	0.0179871515093065	NA	NA	NA	K03322//manganese transport protein	gi|970019554|ref|XP_015070984.1|//PREDICTED: metal transporter Nramp6 [Solanum pennellii]
Solyc10g074500.2.1	1570	2282.84235641751	6554.24021297185	1.52159731214455	1.71049520827687e-05	Up	2.54776310283076e-06	NA	GO:0004448//isocitrate dehydrogenase activity;GO:0046872//metal ion binding;GO:0000166//nucleotide binding	GO:0009060//aerobic respiration	K00030//isocitrate dehydrogenase (NAD+) [EC:1.1.1.41]	gi|808688314|ref|NP_001234366.2|//isocitrate dehydrogenase [NAD] regulatory subunit 1 [Solanum lycopersicum]
Solyc07g066480.3.1	4178	352.38136774448	856.219083455996	1.28084234735281	1.1705984051894e-06	Up	1.39539797964653e-07	GO:0005622//intracellular	GO:0008265//Mo-molybdopterin cofactor sulfurase activity;GO:0046914//transition metal ion binding;GO:0030151//molybdenum ion binding;GO:0003824//catalytic activity;GO:0009000//selenocysteine lyase activity;GO:0016740//transferase activity;GO:0048037//cofactor binding;GO:0030170//pyridoxal phosphate binding	GO:0018315//molybdenum incorporation into molybdenum-molybdopterin complex;GO:0009409//response to cold;GO:0010118//stomatal movement;GO:0009734//auxin-activated signaling pathway;GO:0042742//defense response to bacterium;GO:0009408//response to heat;GO:0009688//abscisic acid biosynthetic process;GO:0045037//protein import into chloroplast stroma;GO:0006777//Mo-molybdopterin cofactor biosynthetic process;GO:0009108//coenzyme biosynthetic process;GO:0009651//response to salt stress	K15631//molybdenum cofactor sulfurtransferase [EC:2.8.1.9]	gi|350534510|ref|NP_001234144.1|//molybdenum cofactor sulfurase [Solanum lycopersicum];gi|723717660|ref|XP_010324191.1|//PREDICTED: molybdenum cofactor sulfurase isoform X1 [Solanum lycopersicum]
Solyc06g008265.1.1	3253	40.1639615204025	1550.74643582297	5.27091742418597	4.83640265879936e-12	Up	2.37962259937944e-13	NA	NA	NA	K10406//kinesin family member C2/C3;K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|723704210|ref|XP_004240486.2|//PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 isoform X1 [Solanum lycopersicum]
Solyc01g106830.3.1	499	49.0870553958468	158.405904897687	1.69021158486241	0.010819804012	Up	0.00319294723285389	NA	NA	NA	NA	gi|460369674|ref|XP_004230682.1|//PREDICTED: phytosulfokines-like [Solanum lycopersicum]
Solyc08g065470.3.1	723	166.558121124686	63.6817151652843	-1.38707460117394	0.0208017823008376	Down	0.00674041083257246	GO:0005753//mitochondrial proton-transporting ATP synthase complex	GO:0015077//monovalent inorganic cation transmembrane transporter activity	GO:0006754//ATP biosynthetic process	K02140//F-type H+-transporting ATPase subunit g	gi|460399163|ref|XP_004245111.1|//PREDICTED: uncharacterized protein LOC101262838 [Solanum lycopersicum]
Solyc02g092520.2.1	1338	9.84960217471662	48.0723614408112	2.28707031376337	0.0229364119901261	Up	0.00755171190952675	NA	NA	NA	K08739//DNA mismatch repair protein MLH3	gi|698485889|ref|XP_009789706.1|//PREDICTED: uncharacterized protein LOC104237290 [Nicotiana sylvestris]
Solyc03g026120.3.1	2270	757.501517919864	26.1977509754037	-4.85373390983025	6.11752906765671e-18	Down	1.40465107562119e-19	NA	NA	NA	K16302//metal transporter CNNM;K15449//tRNA wybutosine-synthesizing protein 1 [EC:4.1.3.44]	gi|460377167|ref|XP_004234366.1|//PREDICTED: probable methyltransferase PMT16 [Solanum lycopersicum]
Solyc01g005120.3.1	1392	935.230509668948	157.245179947028	-2.57230620042834	8.14479512754221e-22	Down	1.2599112784889e-23	GO:0030312//external encapsulating structure;GO:0005576//extracellular region	GO:0016758//transferase activity, transferring hexosyl groups;GO:0016798//hydrolase activity, acting on glycosyl bonds	GO:0044042//glucan metabolic process	K08235//xyloglucan:xyloglucosyl transferase [EC:2.4.1.207]	gi|460365734|ref|XP_004228752.1|//PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 28 [Solanum lycopersicum]
Solyc02g071320.3.1	2733	2568.08116456951	354.577863231593	-2.85651642497501	2.23249496344303e-21	Down	3.57824971775943e-23	NA	NA	NA	K17046//protein DEK;K14306//nuclear pore complex protein Nup62	gi|460374373|ref|XP_004232985.1|//PREDICTED: uncharacterized protein LOC101256345 [Solanum lycopersicum]
BGI_novel_G000351	2770	2.59861922656328	298.776632260061	6.84517825467427	5.16131680382535e-23	Up	7.11826158273214e-25	NA	NA	NA	NA	gi|460400215|ref|XP_004245631.1|//PREDICTED: uncharacterized protein LOC101265850 [Solanum lycopersicum]
Solyc02g079950.3.1	1981	42796.9304316675	9109.41877549614	-2.23207641320437	2.6878095923617e-10	Down	1.73222856164954e-11	GO:0009523//photosystem II	GO:0046872//metal ion binding	GO:0044237//cellular metabolic process	K08901//photosystem II oxygen-evolving enhancer protein 3	gi|970010046|ref|XP_015065924.1|//PREDICTED: oxygen-evolving enhancer protein 3, chloroplastic [Solanum pennellii]
Solyc01g094020.3.1	2055	466.361904761346	75.4229997226177	-2.62837350978128	0.000248989244807632	Down	4.78340005866459e-05	NA	NA	NA	K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460370677|ref|XP_004231177.1|//PREDICTED: receptor-like serine/threonine-protein kinase At2g45590 [Solanum lycopersicum]
Solyc05g054090.3.1	565	94.9336319270544	27.889643202136	-1.76718980037677	0.0134481639260445	Down	0.00408587983305461	NA	NA	NA	NA	gi|460388347|ref|XP_004239829.1|//PREDICTED: induced stolen tip protein TUB8-like [Solanum lycopersicum]
Solyc09g064277.1.1	2380	226.739382314153	52.5338853028192	-2.10971480179336	0.000126239281122561	Down	2.26202704312528e-05	NA	NA	NA	K01601//ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39];K17710//pentatricopeptide repeat domain-containing protein 1;K07478//putative ATPase;K15688//E3 ubiquitin-protein ligase MUL1 [EC:2.3.2.27]	gi|723730221|ref|XP_010326335.1|//PREDICTED: uncharacterized protein LOC101253719 isoform X2 [Solanum lycopersicum]
Solyc03g119320.1.1	702	92.8552867474281	14.8625468889151	-2.64330269138743	0.000667828329261987	Down	0.000141964550536049	NA	NA	NA	NA	gi|460380156|ref|XP_004235824.1|//PREDICTED: uncharacterized protein LOC101259728 [Solanum lycopersicum]
Solyc05g008920.3.1	2518	1963.95985112047	473.255496688894	-2.05307426968538	3.19611934422552e-07	Down	3.4012676039078e-08	NA	NA	NA	K06276//3-phosphoinositide dependent protein kinase-1 [EC:2.7.11.1];K18643//katanin p80 WD40 repeat-containing subunit B1	gi|723697801|ref|XP_010320741.1|//PREDICTED: uncharacterized protein LOC101245647 isoform X1 [Solanum lycopersicum];gi|460386424|ref|XP_004238898.1|//PREDICTED: uncharacterized protein LOC101245647 isoform X2 [Solanum lycopersicum]
Solyc09g009010.3.1	2610	1405.51143663919	284.102729392591	-2.30661059620035	3.1992939204562e-06	Down	4.13566099453635e-07	GO:0016021//integral component of membrane	GO:0016740//transferase activity	NA	K13680//beta-mannan synthase [EC:2.4.1.32]	gi|723727990|ref|XP_010325939.1|//PREDICTED: glucomannan 4-beta-mannosyltransferase 9-like isoform X1 [Solanum lycopersicum];gi|460408050|ref|XP_004249461.1|//PREDICTED: glucomannan 4-beta-mannosyltransferase 9 [Solanum lycopersicum]
Solyc02g081900.3.1	2670	1011.30248313076	73.5980593609865	-3.7804030396025	1.48706296544223e-12	Down	6.80674415373138e-14	NA	NA	NA	K10683//BRCA1-associated RING domain protein 1;K11000//callose synthase [EC:2.4.1.-]	gi|460375952|ref|XP_004233766.1|//PREDICTED: pentatricopeptide repeat-containing protein At3g57430, chloroplastic [Solanum lycopersicum]
Solyc12g010140.2.1	3679	2502.407779266	627.547176072556	-1.99552107934522	0.000326742978821596	Down	6.44400291093284e-05	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process;GO:0023052//signaling	K07198//5'-AMP-activated protein kinase, catalytic alpha subunit [EC:2.7.11.11]	gi|928589379|ref|NP_001265891.2|//CBL-interacting protein kinase 6 [Solanum lycopersicum]
Solyc12g010440.2.1	3982	326.255425047189	1030.13112285019	1.65875418974467	5.79357714601713e-05	Up	9.62500869979065e-06	GO:0016021//integral component of membrane	GO:0022857//transmembrane transporter activity	GO:0006820//anion transport;GO:0055085//transmembrane transport	K13783//MFS transporter, OPA family, solute carrier family 37 (glycerol-3-phosphate transporter), member 1/2	gi|460412781|ref|XP_004251776.1|//PREDICTED: putative glycerol-3-phosphate transporter 5 [Solanum lycopersicum]
Solyc05g052520.3.1	1396	450.619444163819	3034.49511319056	2.75147502516393	2.7412530217022e-06	Up	3.50268948799581e-07	NA	NA	NA	K17506//protein phosphatase 1L [EC:3.1.3.16]	gi|460388582|ref|XP_004239946.1|//PREDICTED: putative protein phosphatase 2C 53 [Solanum lycopersicum]
Solyc04g016260.3.1	3282	1674.19459782867	7033.94154001553	2.07086611717694	0.000472583067220818	Up	9.67960322938123e-05	GO:0031224//intrinsic component of membrane	GO:0046873//metal ion transmembrane transporter activity;GO:0032559//adenyl ribonucleotide binding;GO:0019829//cation-transporting ATPase activity	GO:0009206//purine ribonucleoside triphosphate biosynthetic process;GO:0006816//calcium ion transport	K01537//Ca2+-transporting ATPase [EC:3.6.3.8]	gi|723688779|ref|XP_010319169.1|//PREDICTED: putative calcium-transporting ATPase 11, plasma membrane-type [Solanum lycopersicum]
Solyc08g063010.3.1	2116	215.478285920222	522.478625599462	1.27782952426804	0.000296022668802042	Up	5.77965833899321e-05	GO:0031224//intrinsic component of membrane;GO:0005743//mitochondrial inner membrane;GO:0016021//integral component of membrane;GO:0019866//organelle inner membrane	GO:0005347//ATP transmembrane transporter activity	GO:0006810//transport;GO:0048653//anther development;GO:0055085//transmembrane transport;GO:0015867//ATP transport	K05863//solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31	gi|460399118|ref|XP_004245089.1|//PREDICTED: probable ADP,ATP carrier protein At5g56450 [Solanum lycopersicum]
Solyc12g056770.2.1	1280	230.465397799467	531.886433177601	1.20656807872444	9.22063926359052e-05	Up	1.59749259345343e-05	GO:0015629//actin cytoskeleton	GO:0008092//cytoskeletal protein binding	GO:0007010//cytoskeleton organization	K10365//capping protein (actin filament) muscle Z-line, beta	gi|460414400|ref|XP_004252559.1|//PREDICTED: probable F-actin-capping protein subunit beta [Solanum lycopersicum]
Solyc08g068720.1.1	714	1.11817684664311	32.1585658160133	4.84598278514395	4.58388354604944e-06	Up	6.08268429399732e-07	NA	GO:0016407//acetyltransferase activity	NA	NA	gi|460399516|ref|XP_004245285.1|//PREDICTED: tyramine N-feruloyltransferase 4/11-like [Solanum lycopersicum]
Solyc04g082360.2.1	4197	400.78278328847	1150.25703616826	1.52106384139311	0.000109070875777259	Up	1.92138422142286e-05	NA	NA	NA	K13065//shikimate O-hydroxycinnamoyltransferase [EC:2.3.1.133];K15400//omega-hydroxypalmitate O-feruloyl transferase [EC:2.3.1.188]	gi|460385882|ref|XP_004238629.1|//PREDICTED: vinorine synthase-like [Solanum lycopersicum]
Solyc07g066300.3.1	2546	707.390708716392	304.122565125914	-1.21785440529526	2.98783505743001e-05	Down	4.68310959314641e-06	NA	NA	NA	NA	gi|970042199|ref|XP_015082488.1|//PREDICTED: uncharacterized protein LOC107026139 [Solanum pennellii];gi|460397540|ref|XP_004244325.1|//PREDICTED: uncharacterized protein LOC101257787 [Solanum lycopersicum]
Solyc10g006480.2.1	1762	7707.5336307484	28622.2797090384	1.89279740004394	0.000167093093745317	Up	3.09111012471303e-05	GO:0043231//intracellular membrane-bounded organelle	NA	NA	K08770//ubiquitin C	gi|944266816|gb|KQL31056.1|//hypothetical protein SETIT_016746mg [Setaria italica]
Solyc07g045570.2.1	1708	170.218280394441	14.0340890498141	-3.60037865497408	4.28868464854672e-12	Down	2.0957453310887e-13	NA	NA	NA	K10352//myosin heavy chain	gi|723716147|ref|XP_010323891.1|//PREDICTED: filament-like plant protein 4 [Solanum lycopersicum]
Solyc02g032950.3.1	1810	706.896929226243	2130.82179772156	1.59183816453214	0.00535699507230666	Up	0.00144428005658245	NA	NA	NA	K13424//WRKY transcription factor 33;K01892//histidyl-tRNA synthetase [EC:6.1.1.21]	gi|460371588|ref|XP_004231617.1|//PREDICTED: WRKY transcription factor 6 [Solanum lycopersicum]
Solyc02g080320.3.1	7807	688.895092436406	283.89309529966	-1.27893653956086	0.00523824911022365	Down	0.00140757931398547	NA	GO:0003723//RNA binding;GO:0019239//deaminase activity;GO:0016866//intramolecular transferase activity;GO:0009982//pseudouridine synthase activity;GO:0003676//nucleic acid binding	GO:0009451//RNA modification;GO:0000455//enzyme-directed rRNA pseudouridine synthesis	K05350//beta-glucosidase [EC:3.2.1.21]	gi|723673955|ref|XP_004232727.2|//PREDICTED: RNA pseudouridine synthase 6, chloroplastic [Solanum lycopersicum]
Solyc08g079700.2.1	807	862.434626445746	7568.14641246187	3.13345299109184	2.91163680366242e-08	Up	2.56672917871687e-09	NA	NA	NA	NA	gi|723724710|ref|XP_010325448.1|//PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 1 [Solanum lycopersicum]
Solyc02g068680.1.1	1386	194.776727709066	8512.25348508375	5.44964789636753	4.06578210262206e-10	Up	2.70819763582288e-11	NA	NA	NA	K16219//protein N-terminal methyltransferase [EC:2.1.1.244];K20393//PRA1 family protein 3	gi|723678328|ref|XP_010317353.1|//PREDICTED: uncharacterized protein LOC104646058, partial [Solanum lycopersicum]
Solyc05g051583.1.1	1528	27.7168152905887	146.901708154792	2.40601776748369	0.0279640275589605	Up	0.00949471921256044	NA	NA	NA	NA	gi|460389201|ref|XP_004240247.1|//PREDICTED: F-box protein At5g07610-like [Solanum lycopersicum]
Solyc04g057880.3.1	5240	610.832448942412	1709.20178975753	1.48447412398247	6.14845171346274e-06	Up	8.38112714929672e-07	GO:0005634//nucleus	GO:0008270//zinc ion binding;GO:0018024//histone-lysine N-methyltransferase activity	GO:0034968//histone lysine methylation	K11423//histone-lysine N-methyltransferase SETD2 [EC:2.1.1.43]	gi|723691854|ref|XP_010319721.1|//PREDICTED: histone-lysine N-methyltransferase ASHH2-like [Solanum lycopersicum]
Solyc09g010140.2.1	735	211.850264278856	25.9759928639662	-3.02779412991817	4.40508303267936e-11	Down	2.51714339089662e-12	NA	NA	NA	K01193//beta-fructofuranosidase [EC:3.2.1.26]	gi|460401966|ref|XP_004246486.1|//PREDICTED: uncharacterized protein LOC101246370 [Solanum lycopersicum]
Solyc04g074640.3.1	1590	3604.10400294554	1300.05754948022	-1.47106515506628	0.00726406278957059	Down	0.00204264535874909	GO:0009543//chloroplast thylakoid lumen;GO:0009534//chloroplast thylakoid	GO:0016209//antioxidant activity;GO:0020037//heme binding;GO:0005506//iron ion binding;GO:0004601//peroxidase activity	GO:0006979//response to oxidative stress;GO:0008152//metabolic process;GO:0098869//cellular oxidant detoxification;GO:0006950//response to stress;GO:0055114//oxidation-reduction process	K00434//L-ascorbate peroxidase [EC:1.11.1.11]	gi|460384486|ref|XP_004237942.1|//PREDICTED: thylakoid lumenal 29 kDa protein, chloroplastic [Solanum lycopersicum]
Solyc05g025820.3.1	1602	377.963846074263	973.277272087519	1.36460262488823	0.0366348505002361	Up	0.0129726807720383	NA	GO:0004713//protein tyrosine kinase activity;GO:0032559//adenyl ribonucleotide binding	GO:0006464//cellular protein modification process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460387299|ref|XP_004239317.1|//PREDICTED: putative receptor-like protein kinase At1g72540 [Solanum lycopersicum]
Solyc08g023510.2.1	899	84.5348591165324	4070.22971594651	5.58942003018862	0.000138045096413512	Up	2.49816961043537e-05	NA	NA	NA	NA	gi|970046420|ref|XP_015084717.1|//PREDICTED: uncharacterized protein LOC107028188 [Solanum pennellii];gi|723721615|ref|XP_004244866.2|//PREDICTED: uncharacterized protein LOC101244211 [Solanum lycopersicum]
Solyc01g009480.3.1	1881	6.66157309238179	23.9747938866146	1.84758360549959	0.0226752949853966	Up	0.00745052651320527	NA	NA	NA	NA	gi|460365126|ref|XP_004228455.1|//PREDICTED: uncharacterized protein LOC101246557 [Solanum lycopersicum]
Solyc03g110870.3.1	882	1447.81376654821	2916.20364909767	1.01021543249054	0.000110838460934218	Up	1.95747960305026e-05	GO:0016021//integral component of membrane;GO:0005622//intracellular	GO:0015450//P-P-bond-hydrolysis-driven protein transmembrane transporter activity	GO:0071806//protein transmembrane transport;GO:0006605//protein targeting	K07342//protein transport protein SEC61 subunit gamma and related proteins	gi|460381250|ref|XP_004236365.1|//PREDICTED: protein transport protein Sec61 subunit gamma-1 [Solanum lycopersicum]
Solyc08g016150.1.1	279	22.339504807918	230.774207669816	3.3688128795484	1.04740960348289e-08	Up	8.6516314347625e-10	NA	NA	NA	NA	gi|12003398|gb|AAG43556.1|AF211538_1//Avr9/Cf-9 rapidly elicited protein 180 [Nicotiana tabacum]
Solyc11g069800.1.1	1533	973.351249569443	4051.23726053938	2.05733015491289	0.00180535044388528	Up	0.00042664089064532	NA	GO:0016836//hydro-lyase activity;GO:0005506//iron ion binding;GO:0016491//oxidoreductase activity	NA	K01723//hydroperoxide dehydratase [EC:4.2.1.92]	gi|567757535|ref|NP_001274707.1|//allene oxide synthase 2 [Solanum lycopersicum]
Solyc06g071830.2.1	1320	249.314094593456	16.4207487495502	-3.92437262829954	9.5539239954922e-11	Down	5.74773867926212e-12	GO:0043231//intracellular membrane-bounded organelle	GO:0000989//transcription factor activity, transcription factor binding;GO:0046914//transition metal ion binding;GO:0004468//lysine N-acetyltransferase activity, acting on acetyl phosphate as donor	GO:0006351//transcription, DNA-templated	K00517	gi|460391845|ref|XP_004241529.1|//PREDICTED: BTB/POZ and TAZ domain-containing protein 1 [Solanum lycopersicum]
Solyc10g007480.3.1	3174	1461.10555857946	4375.7872934408	1.58248220017548	0.000907102567162192	Up	0.000199827649169843	NA	NA	NA	K12450//UDP-glucose 4,6-dehydratase [EC:4.2.1.76]	gi|460405537|ref|XP_004248232.1|//PREDICTED: probable rhamnose biosynthetic enzyme 3 [Solanum lycopersicum]
Solyc03g006500.3.1	1924	445.446871974124	1845.48846704904	2.05067744357331	6.39836918590641e-07	Up	7.18588279302818e-08	GO:0005886//plasma membrane	GO:0004674//protein serine/threonine kinase activity;GO:0005524//ATP binding	GO:0006468//protein phosphorylation	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460376674|ref|XP_004234122.1|//PREDICTED: putative serine/threonine-protein kinase isoform X1 [Solanum lycopersicum]
Solyc06g074550.2.1	1211	42.0384438731886	256.386125611439	2.60853702081545	3.28859189443745e-13	Up	1.36432189447923e-14	NA	NA	NA	NA	gi|698445301|ref|XP_009767640.1|//PREDICTED: uncharacterized protein LOC104218762 [Nicotiana sylvestris]
Solyc03g112760.3.1	3885	2424.90917180386	175.617742701139	-3.7874201970887	3.81906473427589e-19	Down	7.74404061221889e-21	NA	NA	NA	NA	gi|460380963|ref|XP_004236222.1|//PREDICTED: uncharacterized protein LOC101255285 isoform X1 [Solanum lycopersicum]
Solyc08g082710.3.1	1459	298.667904420245	54.8624976170692	-2.44465000292409	1.37198257731716e-06	Down	1.65437738095311e-07	NA	NA	NA	NA	gi|460399934|ref|XP_004245491.1|//PREDICTED: protein ABIL2-like isoform X1 [Solanum lycopersicum]
Solyc04g015140.2.1	877	8.66969617958971	45.2109581824717	2.38261915215592	4.39164394288616e-05	Up	7.09459700628769e-06	NA	NA	NA	NA	NA
Solyc07g065650.2.1	946	939.7280858602	2643.67733580874	1.49223083220534	4.73928070297558e-06	Up	6.30125774098475e-07	GO:0031224//intrinsic component of membrane	NA	GO:0051234//establishment of localization	K20347//p24 family protein beta-1	gi|723717976|ref|XP_010324247.1|//PREDICTED: cellulose synthase-like protein E1 [Solanum lycopersicum]
Solyc03g114100.1.1	378	131.485975938532	796.029234533088	2.59791248294521	1.79728731571687e-14	Up	6.26384240418696e-16	NA	NA	NA	NA	gi|460380764|ref|XP_004236124.1|//PREDICTED: uncharacterized protein LOC101251567 [Solanum lycopersicum]
Solyc09g061280.3.1	1644	400.266425462125	1991.59164293192	2.31488935475978	1.49374405360978e-05	Up	2.20264331149556e-06	NA	NA	NA	K06624	gi|806638663|ref|NP_001233984.2|//p27KIP1-related-protein 2 [Solanum lycopersicum]
Solyc01g086870.3.1	1638	1616.52173966819	6873.97981952553	2.08825270671729	5.43131482090268e-05	Up	8.97458573172119e-06	NA	NA	NA	K16189//phytochrome-interacting factor 4;K11253//histone H3;K12126//phytochrome-interacting factor 3	gi|460367489|ref|XP_004229606.1|//PREDICTED: transcription factor bHLH130-like [Solanum lycopersicum]
Solyc09g090650.3.1	2015	0.388694568712978	5.37096050547436	3.78847125895987	0.0235556711343884	Up	0.00778457508116474	NA	NA	NA	K03539//ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]	gi|723732615|ref|XP_004247937.2|//PREDICTED: two-component response regulator-like APRR9 [Solanum lycopersicum]
Solyc02g030450.3.1	1956	244.455898496786	105.836083620958	-1.20774263472634	0.0136861790980521	Down	0.00416533667569687	GO:0031224//intrinsic component of membrane	GO:0016787//hydrolase activity;GO:0032561//guanyl ribonucleotide binding	NA	K00889//1-phosphatidylinositol-4-phosphate 5-kinase [EC:2.7.1.68]	gi|565381055|ref|XP_006356898.1|//PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 2-like isoform X1 [Solanum tuberosum];gi|460371506|ref|XP_004231577.1|//PREDICTED: protein ROOT HAIR DEFECTIVE 3 homolog 2-like isoform X1 [Solanum lycopersicum]
Solyc01g110030.3.1	2648	303.387766455713	1097.62198553053	1.85514646641655	4.18363923251734e-08	Up	3.81124731037437e-09	NA	NA	NA	K14963//COMPASS component SWD3	gi|460370092|ref|XP_004230888.1|//PREDICTED: WD repeat-containing protein 13 [Solanum lycopersicum];gi|970001754|ref|XP_015059277.1|//PREDICTED: WD repeat-containing protein 13 [Solanum pennellii]
Solyc02g086460.3.1	10951	1521.84446344629	8400.09907863389	2.46458542538434	0.000357763765459419	Up	7.11046815800515e-05	NA	NA	NA	K20478//golgin subfamily B member 1;K14306//nuclear pore complex protein Nup62	gi|723671829|ref|XP_010316302.1|//PREDICTED: titin isoform X2 [Solanum lycopersicum];gi|723671849|ref|XP_010316308.1|//PREDICTED: titin isoform X9 [Solanum lycopersicum];gi|460373031|ref|XP_004232326.1|//PREDICTED: titin isoform X3 [Solanum lycopersicum]
Solyc04g015270.3.1	3738	2760.16564624942	1038.18118716284	-1.41069660021925	5.50412048134005e-05	Down	9.10104310989431e-06	GO:0000139//Golgi membrane	GO:0047262//polygalacturonate 4-alpha-galacturonosyltransferase activity	GO:0045489//pectin biosynthetic process;GO:0071555//cell wall organization	K13648//alpha-1,4-galacturonosyltransferase [EC:2.4.1.43]	gi|723689017|ref|XP_010319211.1|//PREDICTED: probable galacturonosyltransferase 4 isoform X2 [Solanum lycopersicum];gi|460381821|ref|XP_004236640.1|//PREDICTED: probable galacturonosyltransferase 4 isoform X1 [Solanum lycopersicum]
Solyc01g094010.3.1	1126	1008.93352594351	5204.50847819893	2.36693079467624	1.20486086177273e-08	Up	1.00734416018944e-09	NA	NA	NA	K14493//gibberellin receptor GID1 [EC:3.-.-.-]	gi|460368030|ref|XP_004229873.1|//PREDICTED: probable carboxylesterase 8 [Solanum lycopersicum]
Solyc08g079430.3.1	3115	3407.48586202753	876.407004747946	-1.95903475083449	0.00535857565941916	Down	0.00144490593112562	NA	GO:0016641//oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor;GO:0046914//transition metal ion binding;GO:0048037//cofactor binding	GO:0006807//nitrogen compound metabolic process	K00276//primary-amine oxidase [EC:1.4.3.21]	gi|849513937|ref|NP_001296994.1|//copper amine oxidase precursor [Solanum lycopersicum]
Solyc02g021270.3.1	3573	121.32412187859	60.1791167052191	-1.01153158177759	0.00765118771191163	Down	0.00216405294311859	NA	NA	NA	K17710//pentatricopeptide repeat domain-containing protein 1	gi|460371646|ref|XP_004231646.1|//PREDICTED: putative pentatricopeptide repeat-containing protein At2g02150 [Solanum lycopersicum]
Solyc02g021430.1.1	921	464.026804818169	60.4043050134605	-2.94148486683186	8.89717520845255e-07	Down	1.03106149258532e-07	NA	NA	NA	K15032//mTERF domain-containing protein, mitochondrial	gi|460371430|ref|XP_004231540.1|//PREDICTED: uncharacterized protein LOC101259687 [Solanum lycopersicum]
Solyc01g105610.1.1	675	0.729898834455697	19.6917186952799	4.7537487078634	9.4222820658602e-05	Up	1.63558847400891e-05	NA	NA	NA	K19041//E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27]	gi|460371046|ref|XP_004231356.1|//PREDICTED: RING-H2 finger protein ATL54-like [Solanum lycopersicum]
Solyc06g064560.3.1	1290	64.5460407917184	9.64521488239438	-2.74244331931058	4.80448722459466e-07	Down	5.27583843881611e-08	NA	NA	NA	NA	gi|723709871|ref|XP_010322789.1|//PREDICTED: uncharacterized protein LOC101260831 isoform X1 [Solanum lycopersicum];gi|460393320|ref|XP_004242258.1|//PREDICTED: uncharacterized protein LOC101260831 isoform X3 [Solanum lycopersicum];gi|970034760|ref|XP_015078707.1|//PREDICTED: uncharacterized protein LOC107022624 isoform X2 [Solanum pennellii]
Solyc04g051190.3.1	2575	2738.77826464184	815.238747299597	-1.74823794036728	6.217643604704e-10	Down	4.26900981059519e-11	GO:0009941//chloroplast envelope	GO:0016705//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen;GO:0020037//heme binding;GO:0005506//iron ion binding;GO:0010291//carotene beta-ring hydroxylase activity;GO:0016491//oxidoreductase activity	GO:0016123//xanthophyll biosynthetic process;GO:0008152//metabolic process;GO:0055114//oxidation-reduction process	K15747//beta-ring hydroxylase [EC:1.14.-.-]	gi|350537695|ref|NP_001234049.1|//cytochrome P450-type monooxygenase 97A29 [Solanum lycopersicum]
Solyc12g056527.1.1	2465	42.9079347953761	12.0881387383417	-1.8276523404553	0.0171991612889519	Down	0.00540054177345052	NA	NA	NA	K17637//exocyst complex component 2	gi|460414565|ref|XP_004252639.1|//PREDICTED: exocyst complex component SEC5A-like [Solanum lycopersicum]
Solyc10g008350.3.1	572	2224.48278567596	9703.1615951822	2.12498496515675	0.00906419904534593	Up	0.00261472478052528	NA	NA	NA	NA	NA
Solyc01g009570.3.1	564	364.674850370004	89.0381592258284	-2.0341150364825	0.0493379495171659	Down	0.0184180544362016	NA	NA	NA	NA	gi|971588215|ref|XP_015161337.1|//PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830 [Solanum tuberosum]
Solyc01g091330.3.1	1466	241.46008594753	63.2882225746142	-1.93177577120863	6.19378685398989e-06	Down	8.44985085940174e-07	NA	NA	NA	K01800//maleylacetoacetate isomerase [EC:5.2.1.2]	gi|460367910|ref|XP_004229813.1|//PREDICTED: glutathione S-transferase zeta class-like isoform X1 [Solanum lycopersicum];gi|969996529|ref|XP_015063582.1|//PREDICTED: glutathione S-transferase zeta class-like [Solanum pennellii]
Solyc02g062390.3.1	642	14.3980352780962	387.060531582984	4.74861534060718	1.33332713026167e-07	Up	1.32795962876814e-08	NA	NA	NA	NA	gi|460375503|ref|XP_004233545.1|//PREDICTED: desiccation-related protein clone PCC27-04 [Solanum lycopersicum]
Solyc10g006820.3.1	5127	1377.65256177721	587.928416351377	-1.22849967775863	1.72222258614345e-05	Down	2.56972454612056e-06	NA	NA	NA	K10357//myosin V	gi|460405629|ref|XP_004248278.1|//PREDICTED: myosin-2-like isoform X1 [Solanum lycopersicum];gi|723734603|ref|XP_010327147.1|//PREDICTED: myosin-2-like isoform X2 [Solanum lycopersicum]
Solyc03g114600.3.1	4316	99.1035544857374	1243.44697834164	3.64926437828423	1.42337418432692e-13	Up	5.59205453362371e-15	GO:0043231//intracellular membrane-bounded organelle;GO:0031224//intrinsic component of membrane;GO:0031090//organelle membrane	NA	GO:0006629//lipid metabolic process	K04710//ceramide synthetase [EC:2.3.1.24]	gi|970013093|ref|XP_015067503.1|//PREDICTED: protein ASC1 isoform X1 [Solanum pennellii]
Solyc02g086150.3.1	1185	1309.59505577291	354.591058601827	-1.88489271751652	0.000296352528251595	Down	5.78720327832901e-05	GO:0044424//intracellular part	NA	GO:0010467//gene expression	K01056//peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29]	gi|723671983|ref|XP_010316327.1|//PREDICTED: chloroplastic group IIB intron splicing facilitator CRS2, chloroplastic [Solanum lycopersicum]
Solyc03g117740.3.1	2150	4658.31176233859	658.351408022167	-2.82287743509979	8.67765048570349e-22	Down	1.35204186037873e-23	NA	NA	NA	NA	gi|460380272|ref|XP_004235881.1|//PREDICTED: uncharacterized protein LOC101253367 [Solanum lycopersicum]
Solyc12g035470.2.1	1847	131.234075896799	45.4880716303581	-1.52858219395523	0.000310245672063161	Down	6.08395139676566e-05	NA	NA	NA	K00737//beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase [EC:2.4.1.144]	gi|747106992|ref|XP_011101798.1|//PREDICTED: uncharacterized protein LOC105179857 isoform X2 [Sesamum indicum];gi|460413692|ref|XP_004252216.1|//PREDICTED: uncharacterized protein LOC101251860 isoform X1 [Solanum lycopersicum]
Solyc04g074130.3.1	1462	419.253408089971	52.2330431653466	-3.00478784686342	1.113909335172e-15	Down	3.31023810999492e-17	GO:0016020//membrane	NA	GO:0006810//transport	K14684//solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41	gi|460384419|ref|XP_004237909.1|//PREDICTED: probable mitochondrial adenine nucleotide transporter BTL3 [Solanum lycopersicum]
Solyc03g118000.1.1	1195	103.0807440444	1878.34469614527	4.18761507616701	6.80100412292588e-18	Up	1.57425956475957e-19	NA	GO:0051766//inositol trisphosphate kinase activity	GO:0006796//phosphate-containing compound metabolic process	K00915//inositol-polyphosphate multikinase [EC:2.7.1.140 2.7.1.151]	gi|460380235|ref|XP_004235863.1|//PREDICTED: inositol polyphosphate multikinase beta [Solanum lycopersicum]
Solyc04g011540.3.1	1142	102.000054470943	1230.25617874985	3.59231693442373	5.60017908232702e-11	Up	3.26057839816416e-12	NA	NA	NA	K12486//stromal membrane-associated protein;K13412//calcium-dependent protein kinase [EC:2.7.11.1];K01803//triosephosphate isomerase (TIM) [EC:5.3.1.1];K03511//DNA polymerase kappa [EC:2.7.7.7]	gi|460382032|ref|XP_004236744.1|//PREDICTED: elicitor-responsive protein 1 isoform X2 [Solanum lycopersicum];gi|723689356|ref|XP_010319255.1|//PREDICTED: elicitor-responsive protein 1 isoform X1 [Solanum lycopersicum]
Solyc12g038570.2.1	2069	308.066228165502	141.4787025789	-1.12265564118154	0.0196438255751271	Down	0.00630362659819105	NA	GO:0005092//GDP-dissociation inhibitor activity	GO:0044699//single-organism process;GO:0065007//biological regulation	K17255//Rab GDP dissociation inhibitor	gi|723737357|ref|XP_010327628.1|//PREDICTED: uncharacterized protein LOC101249409 [Solanum lycopersicum];gi|565353211|ref|XP_006343526.1|//PREDICTED: putative clathrin assembly protein At2g25430 [Solanum tuberosum]
Solyc11g013010.2.1	1919	428.836584480981	187.645485313191	-1.19241840892457	0.00148584974214665	Down	0.000343714906059419	NA	NA	NA	K19755//radial spoke head protein 1;K00889//1-phosphatidylinositol-4-phosphate 5-kinase [EC:2.7.1.68]	gi|460409802|ref|XP_004250327.1|//PREDICTED: junctophilin-1-like [Solanum lycopersicum]
Solyc10g080450.2.1	971	1451.5725657765	456.122840316781	-1.67012237578386	0.0250707924892315	Down	0.00837593234982042	NA	NA	NA	NA	gi|970054822|ref|XP_015089054.1|//PREDICTED: uncharacterized protein LOC107032016 isoform X1 [Solanum pennellii]
Solyc10g008080.2.1	372	2.62544199543148	45.2512235305117	4.1073245739057	5.68239148353924e-06	Up	7.69075722257753e-07	NA	NA	NA	K19038//E3 ubiquitin-protein ligase ATL41 [EC:2.3.2.27]	gi|723734237|ref|XP_010327089.1|//PREDICTED: RING-H2 finger protein ATL40 [Solanum lycopersicum]
Solyc12g006050.2.1	2929	1209.88716945394	102.443207487931	-3.56197627772004	2.65468191537456e-07	Down	2.77856971014304e-08	NA	NA	NA	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460412291|ref|XP_004251535.1|//PREDICTED: protein NRT1/ PTR FAMILY 6.4 [Solanum lycopersicum]
Solyc10g005540.3.1	1830	117.794468185318	41.4964840865859	-1.50521077940754	0.0194141760597178	Down	0.00621039432475391	NA	GO:0016741//transferase activity, transferring one-carbon groups	GO:0006730//one-carbon metabolic process	NA	gi|460405757|ref|XP_004248341.1|//PREDICTED: uncharacterized protein LOC101265175 [Solanum lycopersicum]
Solyc02g089690.3.1	3572	176.944512861859	49.983266382811	-1.82377993470327	0.000169626761853092	Down	3.14556858587719e-05	NA	NA	NA	K16573//gamma-tubulin complex component 6	gi|460372578|ref|XP_004232106.1|//PREDICTED: protein trichome birefringence-like 19 [Solanum lycopersicum]
Solyc12g010840.2.1	2281	8316.7298916243	2054.94392366598	-2.01691735187954	2.04297607295443e-09	Down	1.5192102525511e-10	NA	NA	NA	K00053//ketol-acid reductoisomerase [EC:1.1.1.86]	gi|460412829|ref|XP_004251800.1|//PREDICTED: ketol-acid reductoisomerase, chloroplastic-like [Solanum lycopersicum]
Solyc01g079670.2.1	684	6.60565560293992	31.3155426306959	2.24510521860377	0.00647937557098149	Up	0.00179373499201131	NA	NA	NA	NA	gi|723658712|ref|XP_004229560.2|//PREDICTED: uncharacterized protein LOC101244226 [Solanum lycopersicum]
Solyc08g075910.1.1	1190	407.13600132659	83.8056325059802	-2.28039168396712	0.00213532322713479	Down	0.00051361416373568	NA	GO:0061630//ubiquitin protein ligase activity;GO:0008270//zinc ion binding	GO:0043161//proteasome-mediated ubiquitin-dependent protein catabolic process;GO:0042787//protein ubiquitination involved in ubiquitin-dependent protein catabolic process;GO:0000209//protein polyubiquitination	K11982//E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]	gi|460400900|ref|XP_004245969.1|//PREDICTED: E3 ubiquitin-protein ligase RING1-like [Solanum lycopersicum]
Solyc10g006040.1.1	1098	394.544546173847	54.7926565455688	-2.84813373985398	3.04172592272545e-12	Down	1.45464975356223e-13	NA	NA	NA	K00640//serine O-acetyltransferase [EC:2.3.1.30]	gi|460405796|ref|XP_004248360.1|//PREDICTED: serine acetyltransferase 1, chloroplastic-like [Solanum lycopersicum]
Solyc02g071260.3.1	4255	871.231088221795	176.376391740986	-2.30439796799275	2.5923845770246e-10	Down	1.66783054269586e-11	GO:0044464//cell part	GO:0032559//adenyl ribonucleotide binding;GO:0042802//identical protein binding;GO:0004930//G-protein coupled receptor activity;GO:0004673//protein histidine kinase activity	GO:0007602//phototransduction;GO:0006468//protein phosphorylation;GO:0006351//transcription, DNA-templated	K12123//phytochrome E	gi|460374353|ref|XP_004232975.1|//PREDICTED: phytochrome E isoform X2 [Solanum lycopersicum];gi|723675571|ref|XP_010316899.1|//PREDICTED: phytochrome E isoform X1 [Solanum lycopersicum]
Solyc09g091160.1.1	357	0.672564052382692	10.8536450492231	4.01236415247561	0.0168225494016146	Up	0.00526221986649583	NA	NA	NA	NA	gi|723732731|ref|XP_010326805.1|//PREDICTED: uncharacterized protein LOC101250340 isoform X2 [Solanum lycopersicum]
Solyc06g009160.3.1	4062	525.625766851717	198.873890784775	-1.40218211618634	4.85498440096008e-06	Down	6.47319188990391e-07	GO:0043231//intracellular membrane-bounded organelle;GO:0005618//cell wall;GO:0009506//plasmodesma;GO:0005730//nucleolus;GO:0005777//peroxisome	GO:0003824//catalytic activity;GO:0003857//3-hydroxyacyl-CoA dehydrogenase activity;GO:0005488//binding;GO:0016508//long-chain-enoyl-CoA hydratase activity;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process;GO:0006631//fatty acid metabolic process;GO:0055114//oxidation-reduction process;GO:0044710//single-organism metabolic process	K10527//enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [EC:4.2.1.17 1.1.1.35 1.1.1.211]	gi|703132531|ref|XP_010105147.1|//Glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a [Morus notabilis];gi|596126577|ref|XP_007221966.1|//hypothetical protein PRUPE_ppa002036mg [Prunus persica];gi|747071185|ref|XP_011082448.1|//PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a-like isoform X2 [Sesamum indicum];gi|460389826|ref|XP_004240549.1|//PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a-like isoform X1 [Solanum lycopersicum]
Solyc04g007820.3.1	641	35.0504161801848	255.030269640483	2.86316501161133	5.22192419875588e-07	Up	5.77121114108811e-08	NA	NA	GO:0050896//response to stimulus	NA	gi|460382595|ref|XP_004237024.1|//PREDICTED: kirola-like [Solanum lycopersicum]
Solyc02g079590.3.1	3078	947.110383757512	11482.8073209678	3.59979900690862	2.22740458871768e-23	Up	2.93079551147063e-25	NA	GO:0000166//nucleotide binding;GO:0004672//protein kinase activity	GO:0009987//cellular process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|970007855|ref|XP_015064841.1|//PREDICTED: uncharacterized protein LOC107010091 [Solanum pennellii]
Solyc01g095320.3.1	4039	21604.7707716872	121.59712703182	-7.47309697096285	3.85015832180487e-26	Down	3.91789630927662e-28	NA	NA	NA	K01555//fumarylacetoacetase [EC:3.7.1.2];K20478//golgin subfamily B member 1	gi|460368215|ref|XP_004229963.1|//PREDICTED: BAG family molecular chaperone regulator 6 [Solanum lycopersicum]
Solyc04g008500.3.1	2180	528.19873790079	125.362573228036	-2.07497415587771	0.012190608974901	Down	0.00364927615466788	NA	NA	NA	K14794//ribosomal RNA-processing protein 12;K12309//beta-galactosidase [EC:3.2.1.23]	gi|460382338|ref|XP_004236896.1|//PREDICTED: zinc finger protein JACKDAW-like isoform X1 [Solanum lycopersicum];gi|970021378|ref|XP_015071951.1|//PREDICTED: protein indeterminate-domain 5, chloroplastic-like isoform X2 [Solanum pennellii]
Solyc02g092790.3.1	3772	11794.280866638	2195.12082150793	-2.42571520138553	4.81362430560463e-07	Down	5.28766618034025e-08	GO:0044464//cell part	NA	GO:0051234//establishment of localization	K12347//natural resistance-associated macrophage protein	gi|697124709|ref|XP_009616361.1|//PREDICTED: metal transporter Nramp3-like [Nicotiana tomentosiformis];gi|350535300|ref|NP_001234443.1|//Arabinogalactan 1 precursor [Solanum lycopersicum]
Solyc12g037950.2.1	1046	0.373331025406646	7.17471812119717	4.26439483973452	0.00706269591387521	Up	0.0019764870517536	NA	NA	NA	K14006//protein transport protein SEC23	gi|460413743|ref|XP_004252239.1|//PREDICTED: cell number regulator 2-like [Solanum lycopersicum]
Solyc07g007150.1.1	417	114.556951842879	36.0248805302408	-1.66899945957853	0.00400570352465937	Down	0.00104278490443645	NA	NA	NA	NA	gi|723713982|ref|XP_010323473.1|//PREDICTED: uncharacterized protein LOC104648246 [Solanum lycopersicum]
Solyc10g079080.2.1	1034	1143.57885520758	2808.37299333624	1.296178709666	0.00341544259784732	Up	0.000870665421450643	NA	GO:0046914//transition metal ion binding;GO:0003676//nucleic acid binding	NA	NA	gi|994313886|ref|NP_001307106.1|//zinc finger A20 and AN1 domain-containing stress-associated protein 8-like [Solanum lycopersicum]
Solyc05g013530.3.1	1265	3289.61760542773	1056.02693008579	-1.63927326490295	0.0119400821170909	Down	0.0035667145551799	NA	NA	NA	K02923//large subunit ribosomal protein L38e;K17604//zinc finger SWIM domain-containing protein 3;K04422//mitogen-activated protein kinase kinase kinase 13 [EC:2.7.11.25];K03255//protein TIF31	gi|723698891|ref|XP_010320935.1|//PREDICTED: uncharacterized protein LOC101267605 isoform X1 [Solanum lycopersicum];gi|460386896|ref|XP_004239130.1|//PREDICTED: uncharacterized protein LOC101267605 isoform X2 [Solanum lycopersicum]
Solyc00g006820.3.1	2986	717.557829792676	3202.30134218214	2.15794206236684	1.16621907700755e-05	Up	1.67577700233492e-06	GO:0016021//integral component of membrane	GO:0005215//transporter activity	GO:0006857//oligopeptide transport	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460415780|ref|XP_004253233.1|//PREDICTED: protein NRT1/ PTR FAMILY 6.1 [Solanum lycopersicum]
Solyc04g040160.3.1	2238	5155.78265125886	155.044564144376	-5.05543659516573	1.42975186130181e-49	Down	2.02514427946432e-52	NA	NA	NA	K13071//pheophorbide a oxygenase [EC:1.14.15.17]	gi|460383227|ref|XP_004237332.1|//PREDICTED: protochlorophyllide-dependent translocon component 52, chloroplastic [Solanum lycopersicum]
Solyc05g009660.3.1	2546	310.322655798804	101.074064410948	-1.61835617847839	0.0302610885936811	Down	0.010403236174874	NA	NA	NA	K14431//transcription factor TGA	gi|460387513|ref|XP_004239421.1|//PREDICTED: transcription factor HBP-1b(c38)-like [Solanum lycopersicum]
Solyc10g055210.2.1	417	1.3955990028707	17.65909043105	3.66145465884913	0.000842768586283777	Up	0.000184084684494667	NA	NA	NA	K01870//isoleucyl-tRNA synthetase [EC:6.1.1.5]	gi|723736138|ref|XP_010327416.1|//PREDICTED: dirigent protein 23-like [Solanum lycopersicum]
Solyc12g005850.2.1	2082	533.047736080835	1521.21502519217	1.51288745208845	2.59213659908832e-05	Up	4.01941563001618e-06	NA	NA	NA	K03327//multidrug resistance protein, MATE family	gi|460412251|ref|XP_004251515.1|//PREDICTED: protein TRANSPARENT TESTA 12 [Solanum lycopersicum]
Solyc05g052030.1.1	606	1357.98163553197	429.058791816192	-1.66221671784795	5.12879119728186e-05	Down	8.41352693426177e-06	GO:0043231//intracellular membrane-bounded organelle	GO:0001071//nucleic acid binding transcription factor activity;GO:0003676//nucleic acid binding	GO:0006351//transcription, DNA-templated	K09286//EREBP-like factor	gi|350537843|ref|NP_001234313.1|//ethylene response factor 4 [Solanum lycopersicum]
Solyc10g009190.1.1	378	542.79000157	1253.17387494305	1.20712054807058	0.00273997634938088	Up	0.000680398182480074	NA	NA	NA	NA	gi|970055277|ref|XP_015089285.1|//PREDICTED: eggshell protein 2A-like [Solanum pennellii]
Solyc03g115230.3.1	3212	1156.66332155443	90.9517373875027	-3.66872398260129	1.53574665626992e-12	Down	7.04675761841461e-14	NA	GO:0032559//adenyl ribonucleotide binding;GO:0016462//pyrophosphatase activity	GO:0043170//macromolecule metabolic process;GO:0050896//response to stimulus	K03695//ATP-dependent Clp protease ATP-binding subunit ClpB	gi|698483248|ref|XP_009788495.1|//PREDICTED: chaperone protein ClpB1 [Nicotiana sylvestris];gi|460380444|ref|XP_004235966.1|//PREDICTED: chaperone protein ClpB1 [Solanum lycopersicum]
Solyc03g114720.3.1	2791	1379.22963579818	676.824066694284	-1.02700990514011	0.00578308410678767	Down	0.00157834135343296	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13422//transcription factor MYC2	gi|723687182|ref|XP_010318888.1|//PREDICTED: transcription factor BIM1 isoform X2 [Solanum lycopersicum];gi|460380675|ref|XP_004236080.1|//PREDICTED: transcription factor BIM1 isoform X1 [Solanum lycopersicum]
Solyc08g081190.3.1	882	13045.2255524143	4025.25204881933	-1.69637086035508	2.90676221780507e-06	Down	3.72934082066686e-07	GO:0031224//intrinsic component of membrane	NA	GO:0006810//transport;GO:0050896//response to stimulus	K09872//aquaporin PIP	gi|350534408|ref|NP_001234139.1|//probable aquaporin PIP-type pTOM75 [Solanum lycopersicum]
Solyc06g074420.1.1	1458	44.4766972261856	5363.48373172925	6.91397690579925	1.28009251900694e-16	Up	3.44500819562773e-18	NA	GO:0005506//iron ion binding;GO:0016712//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen	GO:0008152//metabolic process	K20665;K20624//null	gi|723707587|ref|XP_010322431.1|//PREDICTED: cytochrome P450 94C1 [Solanum lycopersicum]
Solyc02g083190.1.1	1290	131.498390667692	53.0675618051424	-1.30914297271485	0.0149124513784111	Down	0.00459635680811396	NA	NA	NA	NA	gi|460375911|ref|XP_004233746.1|//PREDICTED: F-box protein SKIP23-like [Solanum lycopersicum]
Solyc01g096210.3.1	1715	26.963259033768	0.843994935214192	-4.997616733169	0.00133615891837988	Down	0.000305402060813531	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial	gi|460368302|ref|XP_004230006.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g16420, mitochondrial [Solanum lycopersicum]
Solyc12g088480.2.1	1909	324.164529453036	141.840876744634	-1.1924528787934	0.0109190460894807	Down	0.0032267108020502	NA	NA	NA	K18183//cytochrome c oxidase assembly protein subunit 19;K15601//lysine-specific demethylase 3 [EC:1.14.11.-]	gi|460414797|ref|XP_004252749.1|//PREDICTED: cell division cycle-associated 7-like protein [Solanum lycopersicum];gi|565351422|ref|XP_006342657.1|//PREDICTED: cell division cycle-associated 7-like protein [Solanum tuberosum]
Solyc11g040222.1.1	2456	756.742391947611	216.994057932281	-1.80214672862065	2.24860028096476e-09	Down	1.68049931539226e-10	NA	GO:0020037//heme binding;GO:0005506//iron ion binding;GO:0005488//binding;GO:0016705//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen;GO:0070330//aromatase activity;GO:0004497//monooxygenase activity;GO:0016712//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process;GO:0055114//oxidation-reduction process	K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6];K09837//carotene epsilon-monooxygenase [EC:1.14.99.45];K15747//beta-ring hydroxylase [EC:1.14.-.-];K03549//KUP system potassium uptake protein;K12447//UDP-sugar pyrophosphorylase [EC:2.7.7.64]	gi|113205323|gb|AAT38747.2|//Polyprotein, putative [Solanum demissum];gi|657970482|ref|XP_008376990.1|//PREDICTED: uncharacterized protein LOC103440084 [Malus domestica];gi|723743811|ref|XP_010313051.1|//PREDICTED: LOW QUALITY PROTEIN: cytochrome P450 97B2, chloroplastic-like [Solanum lycopersicum];gi|703086913|ref|XP_010093134.1|//Cytochrome P450 [Morus notabilis];gi|255559122|ref|XP_002520583.1|//PREDICTED: cytochrome P450 97B2, chloroplastic [Ricinus communis];gi|970030705|ref|XP_015076637.1|//PREDICTED: cytochrome P450 97B2, chloroplastic-like isoform X3 [Solanum pennellii]
Solyc06g062420.3.1	538	42.2159349631424	535.917276010224	3.66615075282658	1.69080092207627e-10	Up	1.06005932269729e-11	NA	NA	NA	NA	NA
Solyc03g122300.2.1	5252	1257.26851370976	8198.97361790516	2.70515052063258	1.76664975672197e-07	Up	1.79790405333289e-08	NA	NA	NA	K14085//aldehyde dehydrogenase family 7 member A1 [EC:1.2.1.31 1.2.1.8 1.2.1.3]	gi|460379604|ref|XP_004235551.1|//PREDICTED: uncharacterized protein LOC101253267 [Solanum lycopersicum]
Solyc08g008510.3.1	1869	915.92411876351	2012.97111686621	1.13602648593754	1.2074222956418e-05	Up	1.74083399416373e-06	NA	NA	NA	K18726//FAS-associated factor 2	gi|460398195|ref|XP_004244648.1|//PREDICTED: FAS-associated factor 2-like [Solanum lycopersicum]
Solyc01g097620.1.1	1398	0.745853358352423	12.6577433758483	4.08498440239111	0.0145983405120345	Up	0.00448702534151769	NA	NA	NA	NA	gi|723666768|ref|XP_010315463.1|//PREDICTED: uncharacterized protein LOC104645461 [Solanum lycopersicum];gi|460368515|ref|XP_004230111.1|//PREDICTED: F-box protein At5g49610-like [Solanum lycopersicum]
Solyc10g079920.2.1	3212	821.033979571752	6406.53361706205	2.96403013280367	1.61303034714146e-12	Up	7.41339800963704e-14	GO:0031410//cytoplasmic vesicle	NA	NA	K11001//phosphatidylinositol glycan anchor biosynthesis, class Y;K13495//cis-zeatin O-glucosyltransferase [EC:2.4.1.215]	gi|460407590|ref|XP_004249235.1|//PREDICTED: zeatin O-glucosyltransferase-like [Solanum lycopersicum];gi|629084787|gb|KCW51144.1|//hypothetical protein EUGRSUZ_J00742 [Eucalyptus grandis]
Solyc05g016690.3.1	1313	2.18086727791374	1905.17631652362	9.77080683040634	1.34301348828331e-40	Up	4.10493164004887e-43	NA	NA	NA	NA	gi|723699594|ref|XP_010321046.1|//PREDICTED: nudix hydrolase 2-like isoform X2 [Solanum lycopersicum];gi|460387161|ref|XP_004239256.1|//PREDICTED: nudix hydrolase 2-like isoform X1 [Solanum lycopersicum];gi|723699597|ref|XP_010321047.1|//PREDICTED: nudix hydrolase 2-like isoform X3 [Solanum lycopersicum]
Solyc11g068740.2.1	1260	591.831155388084	1202.6504672836	1.02295985476949	0.000653309217350021	Up	0.000138634612135592	NA	NA	NA	NA	gi|460411362|ref|XP_004251081.1|//PREDICTED: methyl-CpG-binding domain-containing protein 5 [Solanum lycopersicum]
Solyc06g049030.3.1	798	419.873406914955	28.855430762447	-3.86303964332904	7.13026945686241e-25	Down	7.97331458572657e-27	NA	NA	NA	K19040//E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:2.3.2.27]	gi|723705819|ref|XP_010322127.1|//PREDICTED: RING-H2 finger protein ATL74-like isoform X1 [Solanum lycopersicum];gi|723705824|ref|XP_010322128.1|//PREDICTED: RING-H2 finger protein ATL72-like isoform X3 [Solanum lycopersicum]
Solyc05g052360.2.1	2375	57.5493901167247	7.33558645264005	-2.97181642570457	0.0145983405120345	Down	0.0044865147685655	NA	NA	NA	K05909//laccase [EC:1.10.3.2]	gi|460388608|ref|XP_004239959.1|//PREDICTED: laccase-12 [Solanum lycopersicum];gi|970027507|ref|XP_015075054.1|//PREDICTED: laccase-12-like [Solanum pennellii]
Solyc02g072230.3.1	1691	199.302333030479	98.9154871682886	-1.01069027233114	0.00833856476745557	Down	0.00237836206950089	NA	NA	NA	K10999//cellulose synthase A [EC:2.4.1.12]	gi|720094692|ref|XP_010246444.1|//PREDICTED: WD repeat-containing protein 53 isoform X1 [Nelumbo nucifera];gi|460374499|ref|XP_004233048.1|//PREDICTED: WD repeat-containing protein 53 [Solanum lycopersicum]
Solyc09g015020.1.1	465	280.091901995485	20.4406212089393	-3.77638932602135	2.71026733315855e-05	Down	4.21774493660987e-06	NA	NA	GO:0050896//response to stimulus	K13993//HSP20 family protein	gi|460401597|ref|XP_004246305.1|//PREDICTED: 17.3 kDa class I heat shock protein-like [Solanum lycopersicum]
Solyc03g121610.3.1	3658	231.597261373483	75.7382781093391	-1.61252366622857	0.00520927346362926	Down	0.00139843400495967	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460379696|ref|XP_004235597.1|//PREDICTED: receptor-like serine/threonine-protein kinase ALE2 isoform X1 [Solanum lycopersicum]
Solyc10g081050.1.1	1818	741.318351060548	195.92774198625	-1.9197715376997	2.4059661736978e-12	Down	1.13446668023249e-13	NA	GO:0003677//DNA binding;GO:0004518//nuclease activity	GO:0090305//nucleic acid phosphodiester bond hydrolysis	K03648//uracil-DNA glycosylase [EC:3.2.2.27];K18173//cytochrome c oxidase assembly factor 1	gi|460407792|ref|XP_004249334.1|//PREDICTED: uncharacterized protein LOC101251830 isoform X2 [Solanum lycopersicum]
Solyc03g123790.3.1	2299	222.624037193032	549.735005889884	1.30412697792267	1.24461569151178e-07	Up	1.23357429690242e-08	GO:0016021//integral component of membrane	GO:0015369//calcium:proton antiporter activity	GO:0070588//calcium ion transmembrane transport	K07300//Ca2+:H+ antiporter	gi|723684609|ref|XP_010318443.1|//PREDICTED: vacuolar cation/proton exchanger 3-like isoform X1 [Solanum lycopersicum];gi|460379529|ref|XP_004235514.1|//PREDICTED: vacuolar cation/proton exchanger 3-like isoform X2 [Solanum lycopersicum]
Solyc05g054930.3.1	3560	220.430771060882	46.0263434908718	-2.25979389215716	1.26407495162371e-05	Down	1.8286237914214e-06	NA	NA	NA	K20283//golgin subfamily A member 4;K20478//golgin subfamily B member 1	gi|460388196|ref|XP_004239755.1|//PREDICTED: myosin-3 isoform X1 [Solanum lycopersicum]
Solyc07g007700.2.1	1407	588.023659873423	198.245596921007	-1.56858538117769	5.7744516008776e-05	Down	9.5889301781384e-06	NA	NA	NA	NA	gi|460394308|ref|XP_004242746.1|//PREDICTED: uncharacterized protein LOC101262629 [Solanum lycopersicum]
Solyc06g072670.3.1	1212	8.51643724846594	163.48459509723	4.26276086683593	2.72331699713694e-07	Up	2.85954375314401e-08	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K11165//dehydrogenase/reductase SDR family member 7 [EC:1.1.-.-]	gi|460391684|ref|XP_004241449.1|//PREDICTED: 11-beta-hydroxysteroid dehydrogenase 1B-like [Solanum lycopersicum]
Solyc04g074510.3.1	1386	3366.84739813732	7832.86220831239	1.21814124673814	0.000105859013508373	Up	1.85967470801015e-05	NA	GO:0005515//protein binding;GO:0019904//protein domain specific binding	NA	K06630//14-3-3 protein epsilon	gi|568215531|ref|NP_001275270.1|//14-3-3-like protein C-like [Solanum tuberosum]
Solyc08g075780.3.1	666	432.264507093742	963.651072339694	1.15659647417598	0.000390693976981468	Up	7.83630643408855e-05	NA	NA	NA	K12162//ubiquitin-fold modifier 1	gi|970044611|ref|XP_015083729.1|//PREDICTED: ubiquitin-fold modifier 1 [Solanum pennellii]
Solyc03g020015.1.1	246	0.751390401026194	10.8319741425483	3.84958970414531	0.00574955374827442	Up	0.00156726131508614	NA	NA	NA	NA	gi|970015084|ref|XP_015068550.1|//PREDICTED: pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like [Solanum pennellii]
Solyc01g005385.1.1	2000	113.752608582907	34.9146516916887	-1.70399514408458	0.0345984049481063	Down	0.0121354924169405	NA	NA	NA	K19199//histone-lysine N-methyltransferase SETD3 [EC:2.1.1.43]	gi|460365506|ref|XP_004228642.1|//PREDICTED: histone-lysine N-methyltransferase setd3 [Solanum lycopersicum]
Solyc11g065660.2.1	2228	733.76051588308	4566.06307975544	2.63756961094784	9.71407894757936e-25	Up	1.11884985641942e-26	NA	GO:0046872//metal ion binding;GO:0004674//protein serine/threonine kinase activity;GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0005509//calcium ion binding	GO:0006464//cellular protein modification process;GO:0006468//protein phosphorylation	K13412//calcium-dependent protein kinase [EC:2.7.11.1]	gi|460411057|ref|XP_004250931.1|//PREDICTED: calcium-dependent protein kinase 7-like [Solanum lycopersicum];gi|565370138|ref|XP_006351684.1|//PREDICTED: calcium-dependent protein kinase 7-like [Solanum tuberosum]
Solyc09g007330.3.1	5565	571.631394176374	97.2903537437205	-2.5547164766592	0.00013736379008715	Down	2.48481613721835e-05	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial;K10737//DNA helicase MCM8 [EC:3.6.4.12]	gi|723728490|ref|XP_010326022.1|//PREDICTED: probable DNA helicase MCM8 isoform X2 [Solanum lycopersicum];gi|723728484|ref|XP_010326020.1|//PREDICTED: pentatricopeptide repeat-containing protein At3g09650, chloroplastic [Solanum lycopersicum];gi|723728487|ref|XP_010326021.1|//PREDICTED: probable DNA helicase MCM8 isoform X1 [Solanum lycopersicum]
Solyc06g082520.3.1	3144	729.579430406733	2321.24037349197	1.66975896693601	2.53113305732325e-06	Up	3.21156140119589e-07	GO:0005634//nucleus;GO:0005739//mitochondrion	GO:0003677//DNA binding;GO:0008270//zinc ion binding	GO:0045892//negative regulation of transcription, DNA-templated	K09287//RAV-like factor	gi|460393767|ref|XP_004242480.1|//PREDICTED: B3 domain-containing transcription repressor VAL1-like [Solanum lycopersicum]
Solyc06g024210.2.1	363	1060.19187544969	5338.84649573879	2.33220267877351	0.0332712065138025	Up	0.0116129259652321	NA	NA	NA	NA	gi|723754531|ref|XP_010315002.1|//PREDICTED: uncharacterized protein LOC101254183, partial [Solanum lycopersicum]
Solyc04g071030.1.1	1284	1214.6423627417	5378.63511602802	2.14670852887289	8.9907154311189e-05	Up	1.55363637761545e-05	NA	NA	NA	K10260//F-box and WD-40 domain protein 7;K08332//vacuolar protein 8	gi|460384132|ref|XP_004237768.1|//PREDICTED: U-box domain-containing protein 28-like [Solanum lycopersicum]
Solyc09g098140.3.1	1554	590.315958703389	1754.42552706679	1.57143945914216	1.00014609460778e-05	Up	1.42185671866486e-06	NA	NA	NA	K14848//ribosome assembly protein RRB1	gi|723733395|ref|XP_004248003.2|//PREDICTED: uncharacterized protein LOC101262458 [Solanum lycopersicum]
Solyc03g082500.3.1	2620	736.007193044753	2052.61558034633	1.4796716897217	1.71507613109901e-05	Up	2.55586490686367e-06	NA	GO:0046872//metal ion binding;GO:0004674//protein serine/threonine kinase activity;GO:0032559//adenyl ribonucleotide binding	GO:0006464//cellular protein modification process	K00924;K13412//calcium-dependent protein kinase [EC:2.7.11.1]	gi|350534546|ref|NP_001234146.1|//serine/threonine protein kinase pk23 [Solanum lycopersicum];gi|565361493|ref|XP_006347491.1|//PREDICTED: CDPK-related kinase 4-like isoform X1 [Solanum tuberosum]
Solyc10g078830.2.1	1031	527.247251842247	1095.22067901132	1.05467001626017	0.000248301246035481	Up	4.76833166682122e-05	NA	NA	NA	NA	gi|460407468|ref|XP_004249174.1|//PREDICTED: phosducin-like protein 3 [Solanum lycopersicum]
Solyc01g109260.3.1	1243	670.179682593794	253.317592133036	-1.40360067865456	0.000427368804601331	Down	8.66430195402803e-05	NA	NA	NA	NA	gi|460370016|ref|XP_004230851.1|//PREDICTED: plastid division protein PDV2 [Solanum lycopersicum]
Solyc06g048510.3.1	1949	645.601990210952	1316.44349567226	1.02792866826026	0.0044126005555944	Up	0.00116301212185639	NA	NA	NA	K17908//autophagy-related protein 18;K08876//SCY1-like protein 1	gi|460390435|ref|XP_004240839.1|//PREDICTED: autophagy-related protein 18d-like [Solanum lycopersicum]
Solyc03g046470.3.1	3147	342.719083610563	804.549850574971	1.23115528668392	0.00690643670872293	Up	0.00192534814911804	NA	NA	NA	K13506//glycerol-3-phosphate O-acyltransferase 3/4 [EC:2.3.1.15]	gi|460377855|ref|XP_004234702.1|//PREDICTED: uncharacterized protein LOC101260313 [Solanum lycopersicum]
Solyc03g120740.1.1	501	142.383771739859	939.987120755925	2.72285626602331	5.03908304110941e-10	Up	3.41473571221743e-11	NA	NA	NA	NA	gi|460379834|ref|XP_004235665.1|//PREDICTED: uncharacterized protein LOC101261900 [Solanum lycopersicum]
Solyc03g006550.3.1	2715	69.1624016939441	2544.40195837756	5.2011948237721	2.07682483488873e-57	Up	1.47083911819315e-60	NA	NA	NA	K17982//geranyllinalool synthase [EC:4.2.3.144]	gi|726965355|ref|NP_001289840.1|//(E,E)-geranyllinalool synthase [Solanum lycopersicum]
Solyc01g097170.3.1	910	331.974926065625	722.905681597167	1.12273314973604	0.000189068358048198	Up	3.53428438799654e-05	NA	NA	NA	NA	gi|723661970|ref|XP_010327627.1|//PREDICTED: vitellogenin-like [Solanum lycopersicum]
Solyc07g043560.3.1	3608	804.52632511709	5352.03194824165	2.73387519434403	8.67463070212912e-14	Up	3.33798670946008e-15	NA	GO:0000166//nucleotide binding;GO:0016491//oxidoreductase activity	NA	K09486//hypoxia up-regulated 1	gi|460396133|ref|XP_004243633.1|//PREDICTED: heat shock 70 kDa protein 17 [Solanum lycopersicum]
Solyc05g012770.3.1	2335	512.168316746203	1869.30817274952	1.86781451609407	0.000752933364421485	Up	0.000162301090146468	NA	NA	NA	K18835//WRKY transcription factor 2;K08819//cyclin-dependent kinase 12/13 [EC:2.7.11.22 2.7.11.23];K13424//WRKY transcription factor 33	gi|460386808|ref|XP_004239088.1|//PREDICTED: probable WRKY transcription factor 4 [Solanum lycopersicum]
BGI_novel_G000212	2363	110.947706508914	41.4514659765564	-1.42038481448176	0.00895045631038581	Down	0.00257753360378466	NA	NA	NA	K00773//queuine tRNA-ribosyltransferase [EC:2.4.2.29]	gi|697115182|ref|XP_009611519.1|//PREDICTED: queuine tRNA-ribosyltransferase-like isoform X2 [Nicotiana tomentosiformis]
Solyc01g087830.1.1	2631	236.632105411667	2890.60551787151	3.61065400520196	2.48847102808049e-34	Up	1.24293692322494e-36	GO:0005618//cell wall	GO:0004175//endopeptidase activity;GO:0004252//serine-type endopeptidase activity;GO:0005515//protein binding	GO:0044092//negative regulation of molecular function;GO:0006508//proteolysis;GO:0019538//protein metabolic process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13199//plasminogen activator inhibitor 1 RNA-binding protein;K12663//Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase [EC:5.3.3.-];K01183//chitinase [EC:3.2.1.14]	gi|565357132|ref|XP_006345402.1|//PREDICTED: subtilisin-like protease SBT1.7 [Solanum tuberosum];gi|350536739|ref|NP_001234774.1|//subtilisin-like protease precursor [Solanum lycopersicum]
Solyc10g079000.1.1	585	250.872419407175	816.857086330935	1.7031298215468	2.27721596456164e-05	Up	3.49459450055922e-06	GO:0031224//intrinsic component of membrane	NA	NA	NA	gi|568815658|ref|NP_001275630.1|//uncharacterized protein LOC102597373 [Solanum tuberosum]
Solyc02g077850.3.1	2303	733.076178146558	272.76959413499	-1.42628029001029	0.00339596440519576	Down	0.000865067121854325	NA	GO:0016772//transferase activity, transferring phosphorus-containing groups	GO:0006796//phosphate-containing compound metabolic process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1];K13415//protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1]	gi|460374221|ref|XP_004232910.1|//PREDICTED: putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440 [Solanum lycopersicum];gi|698482309|ref|XP_009788086.1|//PREDICTED: putative leucine-rich repeat receptor-like serine/threonine-protein kinase At2g14440 [Nicotiana sylvestris]
Solyc04g011767.1.1	481	21.2118861120663	412.16976934714	4.28029388127027	3.14197219750555e-07	Up	3.33544685347242e-08	NA	NA	NA	NA	gi|460381990|ref|XP_004236723.1|//PREDICTED: uncharacterized protein LOC101253579 [Solanum lycopersicum]
Solyc01g068290.3.1	2790	1433.32381875497	342.076133742615	-2.06697522477946	2.16356573110531e-12	Down	1.01291134570906e-13	NA	GO:0050660//flavin adenine dinucleotide binding;GO:0016491//oxidoreductase activity	GO:0002098//tRNA wobble uridine modification;GO:0055114//oxidation-reduction process	K03495//tRNA uridine 5-carboxymethylaminomethyl modification enzyme	gi|723657808|ref|XP_010320775.1|//PREDICTED: protein MTO1 homolog, mitochondrial isoform X1 [Solanum lycopersicum];gi|460366594|ref|XP_004229166.1|//PREDICTED: protein MTO1 homolog, mitochondrial isoform X2 [Solanum lycopersicum];gi|590709105|ref|XP_007048462.1|//Glucose-inhibited division family A protein isoform 2 [Theobroma cacao]
Solyc09g074460.2.1	885	574.160305564182	1356.46860452138	1.2403301580882	0.0493048196973314	Up	0.0184038491296062	NA	NA	NA	K11982//E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]	gi|460403984|ref|XP_004247465.1|//PREDICTED: E3 ubiquitin-protein ligase CIP8 [Solanum lycopersicum]
Solyc08g081550.3.1	842	0.358433568259673	4.57530107427295	3.67408902091711	0.0294711942874847	Up	0.0100778565824282	NA	GO:0016846//carbon-sulfur lyase activity;GO:0048037//cofactor binding;GO:0016740//transferase activity	GO:0008652//cellular amino acid biosynthetic process	K20772	gi|806638517|ref|NP_001233922.2|//1-aminocyclopropane-1-carboxylate synthase [Solanum lycopersicum]
Solyc03g026140.3.1	1651	83.2718288672694	276.057980478401	1.72907089339647	0.000102851176424129	Up	1.79955055216513e-05	NA	GO:0005506//iron ion binding;GO:0004497//monooxygenase activity	NA	K20556;K07409//cytochrome P450, family 1, subfamily A, polypeptide 2 [EC:1.14.14.1];K20618//null;K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30];K07408//cytochrome P450, family 1, subfamily A, polypeptide 1 [EC:1.14.14.1]	gi|460377163|ref|XP_004234364.1|//PREDICTED: probable (S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 [Solanum lycopersicum]
Solyc09g015770.3.1	1347	1545.4073205694	5603.64608042404	1.85837870264983	0.0247840603921243	Up	0.00825719864037739	NA	GO:0003677//DNA binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0010467//gene expression	K13426//WRKY transcription factor 29;K13459//disease resistance protein RPS2;K16225//probable WRKY transcription factor 52	gi|525345206|ref|NP_001266272.1|//WRKY transcription factor 81 [Solanum lycopersicum]
Solyc09g091600.3.1	1190	463.710981311539	1836.43456890976	1.9856096973789	0.00844650029898229	Up	0.00241355566169667	NA	NA	NA	NA	gi|460404738|ref|XP_004247838.1|//PREDICTED: protein SULFUR DEFICIENCY-INDUCED 2 [Solanum lycopersicum]
BGI_novel_G000228	1085	32.6019263891624	6.78914017535182	-2.26365643516355	0.0063720933082229	Down	0.00176023496001342	NA	NA	NA	K07305//peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12];K12447//UDP-sugar pyrophosphorylase [EC:2.7.7.64];K01592//tyrosine decarboxylase [EC:4.1.1.25];K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1];K01535//H+-transporting ATPase [EC:3.6.3.6]	gi|970012761|ref|XP_015067330.1|//PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Solanum pennellii]
Solyc03g044470.3.1	1134	989.499506173348	331.05653652433	-1.5796213714527	5.72436996715396e-05	Down	9.49723077523567e-06	NA	NA	NA	K13545//red chlorophyll catabolite reductase [EC:1.3.7.12]	gi|460377784|ref|XP_004234668.1|//PREDICTED: red chlorophyll catabolite reductase, chloroplastic [Solanum lycopersicum]
Solyc01g079830.3.1	958	6.49718790800726	0.717814845345621	-3.17813176521362	0.0398988448903358	Down	0.0143307465842879	NA	NA	NA	NA	gi|460367122|ref|XP_004229424.1|//PREDICTED: uncharacterized protein LOC101251812 [Solanum lycopersicum]
Solyc10g085860.1.1	1485	15.2473542315172	799.118985939321	5.71177950268309	9.39247896092815e-20	Up	1.80651526160688e-21	NA	GO:0016757//transferase activity, transferring glycosyl groups	NA	K13496//UDP-glucosyl transferase 73C [EC:2.4.1.-]	gi|460408803|ref|XP_004249831.1|//PREDICTED: UDP-glycosyltransferase 73D1 [Solanum lycopersicum]
Solyc01g102460.3.1	4829	144.040743215504	26.5223244980358	-2.4411978202867	4.59391838496578e-10	Down	3.08567203284193e-11	GO:0016021//integral component of membrane	GO:0005215//transporter activity	GO:0006810//transport	NA	gi|723663471|ref|XP_010314025.1|//PREDICTED: LOW QUALITY PROTEIN: transmembrane protein 184A-like [Solanum lycopersicum];gi|565385207|ref|XP_006358505.1|//PREDICTED: transmembrane protein 184A [Solanum tuberosum];gi|723663468|ref|XP_010314019.1|//PREDICTED: uncharacterized protein LOC104644883 [Solanum lycopersicum]
Solyc02g021020.3.1	3594	462.580638812638	161.370279973762	-1.51932998582105	1.06060066113266e-08	Down	8.78927210348979e-10	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial	gi|460371399|ref|XP_004231526.1|//PREDICTED: pentatricopeptide repeat-containing protein At2g17140 isoform X1 [Solanum lycopersicum];gi|723667577|ref|XP_010315594.1|//PREDICTED: pentatricopeptide repeat-containing protein At2g17140 isoform X2 [Solanum lycopersicum]
Solyc12g007120.2.1	1337	907.969976367885	303.457855397749	-1.58114842592187	0.000925223721368515	Down	0.000204233445577171	GO:0016020//membrane	GO:0016787//hydrolase activity	NA	K03100//signal peptidase I [EC:3.4.21.89]	gi|460412441|ref|XP_004251609.1|//PREDICTED: chloroplast processing peptidase [Solanum lycopersicum]
Solyc01g106620.2.1	896	187.539451274826	2929.79898166979	3.96553566072547	5.634045392492e-08	Up	5.24835852871664e-09	NA	NA	GO:0006950//response to stress	K13449//pathogenesis-related protein 1	gi|350538759|ref|NP_001234358.1|//PR1 protein precursor [Solanum lycopersicum]
Solyc09g091840.3.1	2049	1717.25513299675	3524.10918215239	1.03715422498864	0.017415290806205	Up	0.00548138942774694	GO:0044424//intracellular part	GO:0015038//glutathione disulfide oxidoreductase activity;GO:0000166//nucleotide binding;GO:0050662//coenzyme binding	GO:0006790//sulfur compound metabolic process;GO:0019725//cellular homeostasis	K00383//glutathione reductase (NADPH) [EC:1.8.1.7]	gi|697185547|ref|XP_009601809.1|//PREDICTED: glutathione reductase, chloroplastic [Nicotiana tomentosiformis];gi|460404765|ref|XP_004247851.1|//PREDICTED: glutathione reductase, chloroplastic isoform X1 [Solanum lycopersicum]
Solyc05g015656.1.1	1097	258.72955357295	17.4746551898302	-3.88810896262088	2.77706689689365e-22	Down	4.06809039242285e-24	NA	NA	NA	K12448//UDP-arabinose 4-epimerase [EC:5.1.3.5]	gi|460390248|ref|XP_004240750.1|//PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Solanum lycopersicum];gi|970028927|ref|XP_015075788.1|//PREDICTED: LOW QUALITY PROTEIN: serine/threonine-protein phosphatase 7 long form homolog [Solanum pennellii]
Solyc10g018120.2.1	1733	41.426492117534	190.303354615078	2.19967542614963	0.00637412191027721	Up	0.00176127052783975	NA	NA	NA	NA	gi|460406220|ref|XP_004248565.1|//PREDICTED: uncharacterized protein LOC101247075 [Solanum lycopersicum]
Solyc01g103100.3.1	1526	2643.64587648434	345.334812895856	-2.93646125344374	2.0677230855263e-14	Down	7.28342893925136e-16	NA	GO:0004312//fatty acid synthase activity	GO:0008152//metabolic process	K00059//3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]	gi|460369135|ref|XP_004230419.1|//PREDICTED: carbonyl reductase family member 4 isoform X2 [Solanum lycopersicum]
Solyc10g062160.2.1	4092	61.9216757517355	798.521705771611	3.68881520417318	2.22032931363132e-12	Up	1.04196906435882e-13	NA	GO:0032561//guanyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity	GO:0009207//purine ribonucleoside triphosphate catabolic process	K01528//dynamin GTPase [EC:3.6.5.5]	gi|723735904|ref|XP_010327656.1|//PREDICTED: dynamin-related protein 1E-like isoform X2 [Solanum lycopersicum];gi|723735907|ref|XP_010327657.1|//PREDICTED: dynamin-related protein 1E-like isoform X3 [Solanum lycopersicum];gi|698434414|ref|XP_009798931.1|//PREDICTED: dynamin-related protein 1E-like [Nicotiana sylvestris];gi|460407081|ref|XP_004248985.1|//PREDICTED: dynamin-related protein 1E-like isoform X1 [Solanum lycopersicum]
Solyc04g009200.3.1	1807	9067.96131330246	4482.25670920922	-1.0165529584169	0.0070167343575186	Down	0.0019610658346755	GO:0009532//plastid stroma;GO:0005576//extracellular region	GO:0016769//transferase activity, transferring nitrogenous groups;GO:0016869//intramolecular transferase activity, transferring amino groups;GO:0048037//cofactor binding	GO:0009314//response to radiation;GO:0006779//porphyrin-containing compound biosynthetic process	K01845//glutamate-1-semialdehyde 2,1-aminomutase [EC:5.4.3.8]	gi|808688310|ref|NP_001234690.2|//glutamate-1-semialdehyde 2,1-aminomutase, chloroplastic [Solanum lycopersicum]
Solyc01g096200.3.1	3284	1183.39264648238	7416.41799245888	2.64779372173418	5.46822701064944e-15	Up	1.76105119174039e-16	NA	NA	NA	K08332//vacuolar protein 8	gi|723661660|ref|XP_010327229.1|//PREDICTED: U-box domain-containing protein 44-like [Solanum lycopersicum]
Solyc03g007500.3.1	2046	574.521649273066	229.023731162682	-1.32686416151544	0.000201560573807168	Down	3.79485037386316e-05	NA	NA	NA	NA	gi|460376810|ref|XP_004234189.1|//PREDICTED: plastid division protein PDV1-like [Solanum lycopersicum]
Solyc07g066160.1.1	996	2.7200409869925	17.6927580265257	2.70145866330528	0.00480993864033485	Up	0.00127957850291001	NA	NA	NA	NA	gi|460397548|ref|XP_004244329.1|//PREDICTED: zinc finger protein ZAT2 [Solanum lycopersicum]
Solyc02g086350.3.1	4607	1042.67186438619	63.6300147871527	-4.03443393669042	2.09878252225861e-18	Down	4.58433933965837e-20	NA	NA	NA	K20283//golgin subfamily A member 4	gi|460373043|ref|XP_004232332.1|//PREDICTED: protein PLASTID MOVEMENT IMPAIRED 2 [Solanum lycopersicum]
Solyc02g082900.3.1	1590	959.142836710957	4447.15836566406	2.21306619649326	8.4945483531218e-05	Up	1.45966407886877e-05	NA	NA	NA	K01757//strictosidine synthase [EC:4.3.3.2]	gi|460373491|ref|XP_004232552.1|//PREDICTED: protein YLS2 [Solanum lycopersicum]
Solyc05g009230.2.1	1073	22.2036505748172	93.7583682328322	2.07815056708021	0.0107377338574998	Up	0.00316570602733279	NA	NA	NA	K09422//myb proto-oncogene protein, plant	gi|723697903|ref|XP_004239413.2|//PREDICTED: transcription factor MYB108 [Solanum lycopersicum]
Solyc02g092680.1.1	2262	33.1090938453119	9.25682127957551	-1.8386387531242	0.0307593885016086	Down	0.0105940342088439	NA	GO:0004175//endopeptidase activity;GO:0005515//protein binding	GO:0044092//negative regulation of molecular function;GO:0019538//protein metabolic process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13199//plasminogen activator inhibitor 1 RNA-binding protein;K12663//Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase [EC:5.3.3.-];K01183//chitinase [EC:3.2.1.14]	gi|723669433|ref|XP_004231902.2|//PREDICTED: subtilisin-like protease [Solanum lycopersicum]
Solyc00g007060.3.1	1973	374.319027938086	1225.12170200379	1.71058477938305	1.57384899476181e-06	Up	1.92235805686441e-07	NA	GO:0000166//nucleotide binding;GO:0004672//protein kinase activity	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|970012182|ref|XP_015067032.1|//PREDICTED: probable serine/threonine-protein kinase Cx32, chloroplastic [Solanum pennellii]
Solyc05g056300.3.1	834	10449.0521883674	667.746029224434	-3.96792878232269	1.31713564260319e-23	Down	1.70852543471712e-25	GO:0009532//plastid stroma	GO:0015036//disulfide oxidoreductase activity;GO:0030234//enzyme regulator activity	GO:0019725//cellular homeostasis;GO:0018904//ether metabolic process;GO:0044092//negative regulation of molecular function;GO:0005975//carbohydrate metabolic process;GO:0044093//positive regulation of molecular function	K03671//thioredoxin 1	gi|460387979|ref|XP_004239649.1|//PREDICTED: thioredoxin F1, chloroplastic-like [Solanum lycopersicum]
Solyc05g018510.3.1	4579	1178.3934385544	341.589085010838	-1.78648752084076	1.74127866393404e-05	Down	2.60075428894577e-06	GO:0044464//cell part;GO:0016021//integral component of membrane;GO:0005886//plasma membrane	GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity;GO:0042626//ATPase activity, coupled to transmembrane movement of substances	GO:0055085//transmembrane transport;GO:0042335//cuticle development;GO:0009207//purine ribonucleoside triphosphate catabolic process	K05681//ATP-binding cassette, subfamily G (WHITE), member 2	gi|723699750|ref|XP_010321067.1|//PREDICTED: ABC transporter G family member 32 [Solanum lycopersicum];gi|862574806|dbj|BAR94049.1|//PDR-type ACB transporter [Nicotiana benthamiana]
Solyc09g065130.3.1	2610	802.557848540437	216.275611836683	-1.89173439574197	5.7089878684679e-13	Down	2.45145147773782e-14	GO:0016020//membrane;GO:0031307//integral component of mitochondrial outer membrane;GO:0005739//mitochondrion	GO:0000166//nucleotide binding;GO:0005509//calcium ion binding;GO:0005525//GTP binding;GO:0003924//GTPase activity	GO:0007264//small GTPase mediated signal transduction;GO:0009987//cellular process;GO:0009737//response to abscisic acid;GO:0007005//mitochondrion organization	K07870//Ras homolog gene family, member T1	gi|460403366|ref|XP_004247162.1|//PREDICTED: mitochondrial Rho GTPase 1 [Solanum lycopersicum];gi|747066325|ref|XP_011079844.1|//PREDICTED: LOW QUALITY PROTEIN: mitochondrial Rho GTPase 1 [Sesamum indicum]
Solyc10g007690.3.1	998	47162.9615388917	1756.55517240372	-4.74683351676468	1.27980941538443e-17	Down	3.07215321122549e-19	GO:0031224//intrinsic component of membrane;GO:0009521//photosystem;GO:0009534//chloroplast thylakoid	GO:0043169//cation binding;GO:0046906//tetrapyrrole binding	GO:0006464//cellular protein modification process;GO:0006091//generation of precursor metabolites and energy	K08909//light-harvesting complex I chlorophyll a/b binding protein 3	gi|460405507|ref|XP_004248217.1|//PREDICTED: chlorophyll a-b binding protein 8, chloroplastic-like [Solanum lycopersicum]
Solyc05g005200.3.1	1063	203.607580968697	2916.800739064	3.84052364831402	1.21157211928049e-14	Up	4.10962661601777e-16	NA	GO:0016787//hydrolase activity	GO:0019538//protein metabolic process	K01304//pyroglutamyl-peptidase [EC:3.4.19.3]	gi|970027131|ref|XP_015074873.1|//PREDICTED: pyrrolidone-carboxylate peptidase 1 [Solanum pennellii]
Solyc09g014520.3.1	930	50224.8039736755	4596.2228208777	-3.44987938277137	4.85294737457115e-11	Down	2.78753239310203e-12	GO:0009536//plastid	NA	GO:0006091//generation of precursor metabolites and energy	K08915//light-harvesting complex II chlorophyll a/b binding protein 4	gi|460401640|ref|XP_004246325.1|//PREDICTED: chlorophyll a-b binding protein CP29.1, chloroplastic [Solanum lycopersicum]
Solyc12g041890.2.1	3982	210.177978163449	25.1025516784888	-3.0657055889033	6.73969972310357e-07	Down	7.60188286943172e-08	NA	NA	NA	NA	gi|460414209|ref|XP_004252465.1|//PREDICTED: non-structural maintenance of chromosomes element 4 homolog A-like [Solanum lycopersicum]
Solyc05g011830.3.1	2524	330.246615170856	155.429188909388	-1.08728631390003	0.000103620339470705	Down	1.81558653810315e-05	NA	NA	NA	NA	gi|460386667|ref|XP_004239018.1|//PREDICTED: uncharacterized protein LOC101258367 isoform X1 [Solanum lycopersicum]
Solyc09g075510.3.1	1681	572.422653094403	2016.40868069464	1.81663539869283	9.48529504387385e-09	Up	7.78891642375656e-10	NA	NA	NA	K15697//RING finger protein 114 [EC:2.3.2.27]	gi|460403830|ref|XP_004247389.1|//PREDICTED: protein DEHYDRATION-INDUCED 19-like isoform X2 [Solanum lycopersicum]
Solyc03g005700.1.1	764	219.746415534726	847.86197168252	1.94798978672619	3.02122660685144e-10	Up	1.96850458803352e-11	GO:0031966//mitochondrial membrane	NA	GO:0015031//protein transport	K17769//mitochondrial import receptor subunit TOM22	gi|723678669|ref|XP_010317411.1|//PREDICTED: mitochondrial import receptor subunit TOM9-2-like [Solanum lycopersicum]
Solyc10g080390.2.1	2511	1226.31346030078	189.963906151547	-2.69053056388765	6.63596312531111e-07	Down	7.47250805187299e-08	NA	GO:0005524//ATP binding;GO:0004672//protein kinase activity	GO:0006468//protein phosphorylation	K08857//NIMA (never in mitosis gene a)-related kinase [EC:2.7.11.1]	gi|723738532|ref|XP_010312145.1|//PREDICTED: serine/threonine-protein kinase Nek7-like isoform X2 [Solanum lycopersicum];gi|460407673|ref|XP_004249275.1|//PREDICTED: serine/threonine-protein kinase Nek6-like isoform X1 [Solanum lycopersicum]
Solyc03g114890.3.1	1369	160.833891753787	798.957678964028	2.31254763442163	2.06068074945151e-11	Up	1.11298881987298e-12	NA	NA	NA	NA	gi|971546510|ref|XP_015163181.1|//PREDICTED: COBRA-like protein 4 [Solanum tuberosum]
Solyc07g063130.3.1	3497	1278.53339872656	377.669932674962	-1.75929201153398	1.43249704526721e-05	Down	2.10165065236758e-06	NA	GO:0004674//protein serine/threonine kinase activity;GO:0005524//ATP binding	GO:0006468//protein phosphorylation	K08819//cyclin-dependent kinase 12/13 [EC:2.7.11.22 2.7.11.23]	gi|460397352|ref|XP_004244231.1|//PREDICTED: probable serine/threonine-protein kinase At1g54610 [Solanum lycopersicum]
Solyc08g008280.3.1	1759	987.162243261689	10364.2445093719	3.39218393062951	3.17528865213904e-07	Up	3.37635000243551e-08	NA	NA	NA	K13425//WRKY transcription factor 22;K13459//disease resistance protein RPS2;K16225//probable WRKY transcription factor 52	gi|460398159|ref|XP_004244630.1|//PREDICTED: probable WRKY transcription factor 53 [Solanum lycopersicum]
Solyc01g005390.3.1	875	10.8031360388612	46.7435047675374	2.11331573692147	0.0286243712629995	Up	0.00975200362844099	NA	GO:0003824//catalytic activity	NA	K07766//diphosphoinositol-polyphosphate diphosphatase [EC:3.6.1.52]	gi|460365653|ref|XP_004228715.1|//PREDICTED: nudix hydrolase 18, mitochondrial [Solanum lycopersicum]
Solyc02g078420.2.1	309	7.74418134479153	0.787466242771635	-3.29782275220963	0.0308753085736061	Down	0.0106443167212346	GO:0009532//plastid stroma;GO:0009509//chromoplast	GO:0032559//adenyl ribonucleotide binding;GO:0016462//pyrophosphatase activity	NA	NA	gi|108773172|ref|YP_635682.1|//Ycf2 [Solanum tuberosum]
Solyc11g065255.1.1	3400	135.727145048703	44.3573516620988	-1.6134641469251	0.000135447830759035	Down	2.44763338124274e-05	NA	NA	NA	K17285//selenium-binding protein 1;K11000//callose synthase [EC:2.4.1.-]	gi|969998386|ref|XP_015072564.1|//PREDICTED: uncharacterized protein LOC107016677 [Solanum pennellii];gi|697161936|ref|XP_009589766.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g39680-like [Nicotiana tomentosiformis]
Solyc12g096020.2.1	2708	1171.07457961884	347.740146963832	-1.75175141402535	1.76025145549424e-05	Down	2.63171633665849e-06	NA	NA	NA	K14497//protein phosphatase 2C [EC:3.1.3.16]	gi|460415490|ref|XP_004253091.1|//PREDICTED: probable protein phosphatase 2C 53 isoform X1 [Solanum lycopersicum]
Solyc01g067480.3.1	2737	333.328064505025	148.337561666749	-1.16805883036233	0.00961896335736323	Down	0.00279985406506819	NA	NA	NA	K20285//Rab9 effector protein with kelch motifs	gi|460366685|ref|XP_004229210.1|//PREDICTED: acyl-CoA-binding domain-containing protein 5 isoform X2 [Solanum lycopersicum];gi|723658040|ref|XP_010321161.1|//PREDICTED: acyl-CoA-binding domain-containing protein 4 isoform X1 [Solanum lycopersicum]
Solyc11g010320.1.1	558	0.50754803365302	17.0740550461835	5.07211756191904	0.000697871131317434	Up	0.000149105312535841	NA	NA	NA	NA	gi|460410197|ref|XP_004250517.1|//PREDICTED: uncharacterized protein LOC101261189 [Solanum lycopersicum]
Solyc05g012030.1.1	924	23.2338842412694	2.78731604997636	-3.05928186203999	0.0025459602762036	Down	0.000626430735918443	NA	NA	NA	NA	gi|460386692|ref|XP_004239030.1|//PREDICTED: histone-lysine N-methyltransferase, H3 lysine-79 specific [Solanum lycopersicum]
Solyc07g066360.1.1	246	96.1767230892515	2.12718855515186	-5.49866794653067	3.25094292689274e-08	Down	2.89492420320067e-09	NA	NA	NA	NA	gi|698486618|ref|XP_009790029.1|//PREDICTED: pre-mRNA polyadenylation factor FIP1-like [Nicotiana sylvestris]
Solyc04g014910.3.1	1079	284.22878422571	699.064469213752	1.29837284452619	0.000165891869100604	Up	3.06517815391268e-05	NA	NA	NA	K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|460376234|ref|XP_004233904.1|//PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR [Solanum lycopersicum]
Solyc11g005870.2.1	2061	219.367445447226	103.643070637242	-1.08172577884885	0.00979330110612106	Down	0.00285687976862487	NA	NA	NA	K13506//glycerol-3-phosphate O-acyltransferase 3/4 [EC:2.3.1.15]	gi|970059839|ref|XP_015056674.1|//PREDICTED: uncharacterized protein At1g04910 [Solanum pennellii];gi|460408943|ref|XP_004249900.1|//PREDICTED: uncharacterized protein At1g04910 [Solanum lycopersicum]
Solyc06g069470.3.1	1534	686.731748118627	1994.61154640175	1.53828923964251	0.0117209374799236	Up	0.00349234053146692	NA	NA	NA	K01126//glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]	gi|460391999|ref|XP_004241605.1|//PREDICTED: glycerophosphodiester phosphodiesterase GDPD6 [Solanum lycopersicum]
BGI_novel_G000392	791	0.391782478854511	13.1803587592054	5.07219295030719	0.000514179830655956	Up	0.000106178480014686	NA	NA	NA	K14760//acyl-activating enzyme 14 [EC:6.2.1.26]	gi|723668133|ref|XP_010315687.1|//PREDICTED: uncharacterized protein LOC104645557 [Solanum lycopersicum]
Solyc09g074290.1.1	1425	13.3600287586854	75.894252925518	2.5060675286852	0.030511414340885	Up	0.0105018040861686	NA	NA	NA	K15502//serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A;K06694//26S proteasome non-ATPase regulatory subunit 10	gi|460404148|ref|XP_004247546.1|//PREDICTED: ankyrin repeat, PH and SEC7 domain containing protein secG-like [Solanum lycopersicum]
Solyc08g006160.3.1	1210	5186.45720088668	299.838080531776	-4.11249386187344	1.0613129165768e-68	Down	3.95598969948115e-72	GO:0009536//plastid	NA	NA	K13120//protein FAM32A	gi|460397839|ref|XP_004244474.1|//PREDICTED: probable plastid-lipid-associated protein 8, chloroplastic [Solanum lycopersicum]
Solyc12g014220.2.1	3946	2000.28628936692	466.588697097263	-2.09998323513045	0.000150055748332838	Down	2.73901520644814e-05	NA	NA	NA	K00434//L-ascorbate peroxidase [EC:1.11.1.11];K03243//translation initiation factor 5B;K11593//eukaryotic translation initiation factor 2C	gi|460413015|ref|XP_004251891.1|//PREDICTED: uncharacterized protein At3g15000, mitochondrial [Solanum lycopersicum];gi|460413013|ref|XP_004251890.1|//PREDICTED: stress response protein NST1 isoform X1 [Solanum lycopersicum]
Solyc01g103050.3.1	4028	4003.14385161213	8561.64420837773	1.09675442406991	0.0245476104315984	Up	0.00816911681576377	GO:0043231//intracellular membrane-bounded organelle;GO:0005634//nucleus	GO:0003677//DNA binding;GO:0005515//protein binding;GO:0042802//identical protein binding;GO:0003676//nucleic acid binding	GO:0010150//leaf senescence;GO:0006355//regulation of transcription, DNA-templated;GO:0009734//auxin-activated signaling pathway;GO:0006351//transcription, DNA-templated;GO:0009755//hormone-mediated signaling pathway	K14486//auxin response factor	gi|928589373|ref|NP_001234871.2|//auxin response factor 1 [Solanum lycopersicum]
Solyc08g008230.3.1	759	225.971545075181	508.116951448116	1.16901947897293	0.0074011873796753	Up	0.00208644625587015	NA	NA	NA	NA	gi|698550468|ref|XP_009768984.1|//PREDICTED: arabinogalactan peptide 22-like [Nicotiana sylvestris]
Solyc07g061800.3.1	820	1030.95078765317	160.099431834925	-2.68693537432465	0.0076095674818781	Down	0.00214972834147734	NA	NA	NA	NA	gi|460397524|ref|XP_004244317.1|//PREDICTED: heme-binding protein 2-like [Solanum lycopersicum]
Solyc01g094570.3.1	3821	490.922380511389	245.180048067873	-1.00165335668046	0.0145802134418314	Down	0.00447982329659371	NA	NA	GO:0006629//lipid metabolic process	K01177//beta-amylase [EC:3.2.1.2]	gi|460368142|ref|XP_004229928.1|//PREDICTED: uncharacterized protein LOC101260669 [Solanum lycopersicum]
Solyc12g095900.2.1	3001	989.129398252269	337.196079009023	-1.5525715067993	0.000102963514976577	Down	1.80228368245864e-05	NA	NA	NA	K12125//protein EARLY FLOWERING 3	gi|460415508|ref|XP_004253100.1|//PREDICTED: protein EARLY FLOWERING 3 [Solanum lycopersicum]
Solyc06g063170.3.1	3565	247.764663462713	1030.98022641234	2.05697431482803	3.12507274024177e-10	Up	2.04897977862132e-11	GO:0016021//integral component of membrane	GO:0004970//ionotropic glutamate receptor activity	GO:0035235//ionotropic glutamate receptor signaling pathway;GO:0006811//ion transport	K05387//glutamate receptor, ionotropic, plant	gi|723710004|ref|XP_004241860.2|//PREDICTED: glutamate receptor 2.8 isoform X2 [Solanum lycopersicum];gi|723710001|ref|XP_010322807.1|//PREDICTED: glutamate receptor 2.8 isoform X1 [Solanum lycopersicum]
Solyc02g071430.3.1	1529	2.84756179200663	18.2640741307688	2.68120956651539	0.0172445932482152	Up	0.00541609298902123	NA	NA	NA	K05278//flavonol synthase [EC:1.14.11.23];K05277//leucoanthocyanidin dioxygenase [EC:1.14.11.19]	gi|723678305|ref|XP_004233861.2|//PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101257141 [Solanum lycopersicum]
Solyc11g010200.2.1	3294	966.93091914417	3407.14210219405	1.81707739196799	0.000127231014340029	Up	2.28240452059281e-05	NA	GO:0005515//protein binding;GO:0019904//protein domain specific binding	NA	K06630//14-3-3 protein epsilon	gi|350538649|ref|NP_001234097.1|//14-3-3 protein 6 [Solanum lycopersicum];gi|356515770|ref|XP_003526571.1|//PREDICTED: 14-3-3-like protein [Glycine max]
Solyc02g079710.3.1	4397	81.3182940814883	373.26523957787	2.19854930820482	0.00661328279349172	Up	0.0018354891784829	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1];K01183//chitinase [EC:3.2.1.14]	gi|723678204|ref|XP_010317320.1|//PREDICTED: LOW QUALITY PROTEIN: receptor-like serine/threonine-protein kinase SD1-8 [Solanum lycopersicum]
Solyc07g064760.2.1	2283	219.09344933732	66.9299012137122	-1.71082355986738	0.00248154518545038	Down	0.000608639008508406	NA	NA	NA	K01868//threonyl-tRNA synthetase [EC:6.1.1.3]	gi|460397094|ref|XP_004244103.1|//PREDICTED: uncharacterized protein LOC101243908 [Solanum lycopersicum]
Solyc08g068810.3.1	2243	327.657580459667	789.280015327215	1.26834831115005	0.0019746508019722	Up	0.000471287054011778	NA	GO:0046872//metal ion binding;GO:0008233//peptidase activity	NA	K11366//ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.4.19.12]	gi|460399523|ref|XP_004245288.1|//PREDICTED: ubiquitin carboxyl-terminal hydrolase 22 [Solanum lycopersicum]
Solyc06g009290.3.1	4557	750.982544245154	16243.4285303632	4.43493299245155	2.22834625567821e-12	Up	1.04656190627499e-13	NA	NA	NA	K05658//ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:3.6.3.44]	gi|460389844|ref|XP_004240558.1|//PREDICTED: ABC transporter B family member 21 [Solanum lycopersicum]
Solyc04g009770.3.1	1839	5635.65475148664	19702.082429014	1.80569298682469	1.18242194046536e-11	Up	6.15716210984833e-13	GO:0044424//intracellular part	GO:0043169//cation binding;GO:0005515//protein binding;GO:0032559//adenyl ribonucleotide binding	GO:0044267//cellular protein metabolic process;GO:0006950//response to stress	K09503//DnaJ homolog subfamily A member 2	gi|970024435|ref|XP_015073529.1|//PREDICTED: dnaJ protein homolog [Solanum pennellii];gi|460382153|ref|XP_004236804.1|//PREDICTED: dnaJ protein homolog isoform X1 [Solanum lycopersicum]
Solyc12g005340.2.1	1949	1309.72339285699	8437.25576838789	2.68751168240949	5.28511492698416e-07	Up	5.84892881251527e-08	NA	NA	NA	K14494//DELLA protein	gi|525314202|ref|NP_001266225.1|//Hop-interacting protein THI039 [Solanum lycopersicum]
BGI_novel_G000391	3518	1498.30879302268	315.105722855109	-2.24942712428264	2.19840744081286e-08	Down	1.90275163171592e-09	NA	NA	NA	NA	NA
Solyc07g006950.3.1	3148	174.687372001235	390.721460375693	1.16136517687144	0.00788112519554831	Up	0.00223613854884873	NA	NA	NA	NA	gi|460394206|ref|XP_004242695.1|//PREDICTED: transmembrane protein 230-like [Solanum lycopersicum]
Solyc01g089850.3.1	1049	560.078721603394	47.3914348919478	-3.56293137087466	9.68071454252552e-11	Down	5.82762560987726e-12	NA	GO:0016772//transferase activity, transferring phosphorus-containing groups	GO:0006796//phosphate-containing compound metabolic process	K01647//citrate synthase [EC:2.3.3.1]	gi|460367739|ref|XP_004229728.1|//PREDICTED: cyclin-U4-1 [Solanum lycopersicum]
Solyc01g067020.3.1	1870	537.659117975699	3856.67084023098	2.84259233725859	0.000774720880155548	Up	0.000167575118068535	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|930588886|ref|NP_001234580.2|//atypical receptor-like kinase 1 precursor [Solanum lycopersicum]
Solyc02g070990.1.1	861	4852.16583117751	450.724719278511	-3.42831037825997	4.68158551844941e-05	Down	7.60138158579307e-06	GO:0009521//photosystem;GO:0010287//plastoglobule;GO:0009535//chloroplast thylakoid membrane;GO:0009523//photosystem II;GO:0009534//chloroplast thylakoid;GO:0031224//intrinsic component of membrane;GO:0016021//integral component of membrane;GO:0009941//chloroplast envelope;GO:0009522//photosystem I	GO:0043169//cation binding;GO:0031409//pigment binding;GO:0046872//metal ion binding;GO:0046906//tetrapyrrole binding;GO:0016168//chlorophyll binding	GO:0009768//photosynthesis, light harvesting in photosystem I;GO:0006464//cellular protein modification process;GO:0006091//generation of precursor metabolites and energy;GO:0009416//response to light stimulus;GO:0018298//protein-chromophore linkage	K08912//light-harvesting complex II chlorophyll a/b binding protein 1	gi|460374606|ref|XP_004233101.1|//PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like [Solanum lycopersicum]
Solyc12g056440.2.1	1818	276.146607066943	1108.79086074616	2.00548096450804	1.17309631004735e-10	Up	7.13180289878946e-12	GO:0016021//integral component of membrane	NA	GO:0055085//transmembrane transport	K08150//MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13	gi|723751916|ref|XP_010314484.1|//PREDICTED: SPX domain-containing membrane protein At4g22990-like isoform X2 [Solanum lycopersicum];gi|460414425|ref|XP_004252571.1|//PREDICTED: SPX domain-containing membrane protein At4g22990-like isoform X1 [Solanum lycopersicum]
Solyc03g116580.3.1	2793	1496.02208003182	3826.68509143504	1.35496371414947	0.00081609806220964	Up	0.00017743775148609	NA	NA	NA	K01184//polygalacturonase [EC:3.2.1.15];K16911//ATP-dependent RNA helicase DDX21 [EC:3.6.4.13];K20472//coatomer subunit zeta;K01213//galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]	gi|460380570|ref|XP_004236028.1|//PREDICTED: uncharacterized protein LOC101247711 [Solanum lycopersicum];gi|723686582|ref|XP_010318778.1|//PREDICTED: probable polygalacturonase At3g15720 [Solanum lycopersicum]
Solyc03g121540.3.1	2937	612.575844645338	79.5010722143657	-2.94584225611827	3.27752315161395e-06	Down	4.24900310172704e-07	NA	GO:0030246//carbohydrate binding;GO:0015925//galactosidase activity;GO:0043167//ion binding	GO:0044238//primary metabolic process	K12309//beta-galactosidase [EC:3.2.1.23]	gi|350537661|ref|NP_001234303.1|//beta-galactosidase precursor [Solanum lycopersicum]
Solyc08g008277.1.1	534	2.1758613238164	23.0827202632192	3.40715473739016	0.00128893427185783	Up	0.000293358903532277	NA	NA	NA	NA	gi|697191126|ref|XP_009604630.1|//PREDICTED: probable WRKY transcription factor 41 [Nicotiana tomentosiformis]
Solyc03g111170.3.1	2202	1214.62606643622	11952.1168259065	3.29868201427701	1.12593576907413e-12	Up	5.04463543472158e-14	NA	GO:0016703//oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)	GO:0008152//metabolic process	K10526//OPC-8:0 CoA ligase 1 [EC:6.2.1.-]	gi|460381204|ref|XP_004236342.1|//PREDICTED: 4-coumarate--CoA ligase-like 9 [Solanum lycopersicum]
Solyc09g005230.3.1	2356	278.728512308261	102.909673117021	-1.43748199287516	0.00306235578805662	Down	0.000770497300185708	NA	NA	NA	K00620//glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]	gi|723728848|ref|XP_010326091.1|//PREDICTED: protein root UVB sensitive 5 [Solanum lycopersicum]
Solyc04g074440.1.1	948	517.147073892086	2445.37372586921	2.24140842991393	0.00119797990660714	Up	0.000270782397259045	NA	NA	NA	K14299//nucleoporin SEH1	gi|460384466|ref|XP_004237932.1|//PREDICTED: protein EXORDIUM-like [Solanum lycopersicum]
Solyc12g095800.2.1	2321	470.18243642312	1916.74853805662	2.02736852596402	3.81660650654696e-12	Up	1.84798414045195e-13	NA	NA	NA	K03686//molecular chaperone DnaJ;K09510//DnaJ homolog subfamily B member 4	gi|460415526|ref|XP_004253109.1|//PREDICTED: chaperone protein dnaJ 10 [Solanum lycopersicum]
Solyc01g008560.3.1	2041	676.057213304047	5695.55242230375	3.07461852937359	2.68603120141789e-21	Up	4.33521511187544e-23	GO:0044424//intracellular part	GO:0043169//cation binding;GO:0016301//kinase activity	GO:0006796//phosphate-containing compound metabolic process	K00858//NAD+ kinase [EC:2.7.1.23]	gi|460365245|ref|XP_004228514.1|//PREDICTED: NAD(H) kinase 1 [Solanum lycopersicum]
Solyc02g065650.1.1	1194	206.726140310662	633.960596397568	1.61667234531599	0.00326755967104579	Up	0.000827486223538286	NA	NA	NA	K11982//E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27];K11274//chromosome transmission fidelity protein 4	gi|460375210|ref|XP_004233400.1|//PREDICTED: E3 ubiquitin-protein ligase CIP8-like [Solanum lycopersicum]
Solyc01g107080.3.1	2159	3.05145828686382	192.586059691623	5.97986059846022	1.15997479651599e-15	Up	3.46764494858292e-17	NA	NA	NA	K19747//BAHD acyltransferase [EC:2.3.1.-]	gi|460369702|ref|XP_004230696.1|//PREDICTED: uncharacterized acetyltransferase At3g50280-like [Solanum lycopersicum]
Solyc05g053290.3.1	1414	380.605958041603	1367.6685956657	1.84534863734348	1.08401120445126e-06	Up	1.28248530003292e-07	NA	NA	NA	K14803//protein phosphatase PTC2/3 [EC:3.1.3.16]	gi|460388460|ref|XP_004239885.1|//PREDICTED: probable protein phosphatase 2C 49 [Solanum lycopersicum]
Solyc01g110270.3.1	3141	2472.63390189396	388.641910272318	-2.66953525872837	1.28986613393031e-10	Down	7.91382010007938e-12	NA	NA	NA	K07574//RNA-binding protein	gi|460370224|ref|XP_004230954.1|//PREDICTED: uncharacterized protein LOC101264983 [Solanum lycopersicum]
Solyc08g079310.3.1	1963	203.469588335409	8.38959506385686	-4.60006818883191	2.77129999286589e-10	Down	1.79120105398444e-11	NA	NA	NA	K20770;K20618//null;K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30]	gi|723724833|ref|XP_010325460.1|//PREDICTED: geraniol 8-hydroxylase-like isoform X1 [Solanum lycopersicum]
Solyc07g062685.1.1	1011	19.8198836639003	194.764935664724	3.29671356693123	2.41106794010396e-11	Up	1.32736854606568e-12	NA	NA	NA	K19475//WAS/WASL-interacting protein	gi|723718784|ref|XP_010324382.1|//PREDICTED: uncharacterized protein LOC101263830 isoform X1 [Solanum lycopersicum]
Solyc02g062890.2.1	1746	35.3566378444267	524.873024110057	3.89191545532699	1.26171636521376e-12	Up	5.69060981776e-14	GO:0031224//intrinsic component of membrane	GO:0022857//transmembrane transporter activity	GO:0006810//transport	K08150//MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13	gi|460375438|ref|XP_004233513.1|//PREDICTED: probable polyol transporter 6 isoform X2 [Solanum lycopersicum]
Solyc01g105040.3.1	3470	5532.38315896268	352.474671847156	-3.97230958032941	2.07362172921792e-13	Down	8.3553939514111e-15	NA	NA	NA	K08917//light-harvesting complex II chlorophyll a/b binding protein 6	gi|460369607|ref|XP_004230649.1|//PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Solanum lycopersicum]
Solyc10g076990.2.1	3255	1696.91275619303	802.755020995226	-1.07988070441765	0.00177972965967735	Down	0.000419790118027369	NA	NA	NA	K12486//stromal membrane-associated protein;K15044//Arf-GAP domain and FG repeats-containing protein 1	gi|460407306|ref|XP_004249094.1|//PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD14 isoform X1 [Solanum lycopersicum]
Solyc09g098490.3.1	1308	83.3527578259995	12.6754430835335	-2.71719375425502	2.45015914711485e-05	Down	3.78282361240111e-06	NA	NA	NA	K12471//epsin	gi|723733289|ref|XP_010326913.1|//PREDICTED: uncharacterized protein LOC101246284 [Solanum lycopersicum];gi|723733284|ref|XP_010326912.1|//PREDICTED: clathrin interactor EPSIN 2 isoform X1 [Solanum lycopersicum]
Solyc01g073740.3.1	1972	1227.23550859038	5103.41020933304	2.05604947821343	4.12330010217243e-12	Up	2.01031628658176e-13	GO:0044429//mitochondrial part	GO:0046912//transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer	GO:0005975//carbohydrate metabolic process;GO:0009060//aerobic respiration	K01647//citrate synthase [EC:2.3.3.1]	gi|460366958|ref|XP_004229342.1|//PREDICTED: citrate synthase, mitochondrial [Solanum lycopersicum]
Solyc02g068440.3.1	1858	612.804466502285	119.872420838927	-2.35392703784658	6.12093785187979e-08	Down	5.75406488088596e-09	GO:0005634//nucleus	GO:0000166//nucleotide binding;GO:0005488//binding;GO:0003676//nucleic acid binding	NA	K13195//cold-inducible RNA-binding protein	gi|723676525|ref|XP_010317044.1|//PREDICTED: cold-inducible RNA-binding protein [Solanum lycopersicum]
Solyc04g018110.1.1	729	2768.34897220242	7945.68575357902	1.52114591943855	0.000437570451033924	Up	8.89232927924911e-05	NA	NA	NA	K13448//calcium-binding protein CML	gi|525314049|ref|NP_001265939.1|//Hop-interacting protein THI026 [Solanum lycopersicum]
Solyc07g005830.3.1	1247	5813.26023679239	1658.20360659985	-1.80972633123529	1.33297094716428e-06	Down	1.60336113258504e-07	NA	NA	NA	K02520//translation initiation factor IF-3	gi|460394039|ref|XP_004242613.1|//PREDICTED: translation initiation factor IF-3, chloroplastic [Solanum lycopersicum]
Solyc01g068000.3.1	1756	498.183421546167	2060.81852534377	2.04846854970441	5.70268132542067e-08	Up	5.32261593814424e-09	NA	NA	NA	K14803//protein phosphatase PTC2/3 [EC:3.1.3.16]	gi|460366631|ref|XP_004229184.1|//PREDICTED: probable protein phosphatase 2C 47 [Solanum lycopersicum]
BGI_novel_G000171	719	17.953669683291	3.54409591309257	-2.34078920442115	0.0385179203379518	Down	0.0137471703904834	NA	NA	NA	NA	gi|723723415|ref|XP_010325222.1|//PREDICTED: uncharacterized protein LOC101264141 [Solanum lycopersicum]
Solyc01g098010.3.1	4026	30.5826740026283	101.250826878512	1.72714723033358	0.00018996254055838	Up	3.55383178419005e-05	NA	GO:0016407//acetyltransferase activity	NA	K03232//elongation factor 1-beta	gi|460368567|ref|XP_004230137.1|//PREDICTED: uncharacterized protein LOC101248425 [Solanum lycopersicum]
Solyc07g038160.3.1	744	91.7126227375315	25.5915148452467	-1.84145476305339	0.0403177440123899	Down	0.0145037478553591	NA	NA	NA	K17895//GATA-binding protein 3	gi|460396799|ref|XP_004243958.1|//PREDICTED: GATA transcription factor 21 [Solanum lycopersicum]
Solyc03g096390.3.1	1912	570.602205319182	2098.0080488344	1.87846298479416	0.00185989625877327	Up	0.000441163236507799	GO:0031224//intrinsic component of membrane	NA	NA	K14209//solute carrier family 36 (proton-coupled amino acid transporter);K15015//solute carrier family 32 (vesicular inhibitory amino acid transporter)	gi|922959973|ref|NP_001233986.2|//proline transporter 1 [Solanum lycopersicum]
Solyc07g017760.1.1	2529	680.597919464	53.2383147378376	-3.67626593261676	6.2581544317904e-10	Down	4.30148977643562e-11	NA	NA	NA	K17710//pentatricopeptide repeat domain-containing protein 1	gi|460394635|ref|XP_004242906.1|//PREDICTED: pentatricopeptide repeat-containing protein At2g18940, chloroplastic [Solanum lycopersicum]
Solyc01g087590.3.1	2135	404.209389627648	1460.79103043588	1.85357507154417	0.0055486520402446	Up	0.00150339763234449	NA	GO:0016647//oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor	GO:0008152//metabolic process	K13366//polyamine oxidase [EC:1.5.3.14 1.5.3.16 1.5.3.-]	gi|460367580|ref|XP_004229651.1|//PREDICTED: polyamine oxidase 1 [Solanum lycopersicum]
Solyc08g067770.3.1	2392	1382.39551421003	3388.89543983945	1.29364468378128	0.00304083473868424	Up	0.000764175779342819	NA	NA	NA	K13148//integrator complex subunit 11 [EC:3.1.27.-]	gi|460399416|ref|XP_004245237.1|//PREDICTED: E3 ubiquitin-protein ligase At1g63170 [Solanum lycopersicum]
Solyc01g009680.3.1	3903	207.716919483109	1612.70030866897	2.95678772436837	0.000273335704004597	Up	5.29391798869795e-05	GO:0016021//integral component of membrane	GO:0016702//oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen;GO:0046914//transition metal ion binding	GO:0006633//fatty acid biosynthetic process	K00454//lipoxygenase [EC:1.13.11.12]	gi|32454712|gb|AAP83137.1|//lipoxygenase, partial [Nicotiana attenuata];gi|460365955|ref|XP_004228859.1|//PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Solanum lycopersicum];gi|723654952|ref|XP_010326133.1|//PREDICTED: receptor-like protein 12 isoform X2 [Solanum lycopersicum];gi|460365098|ref|XP_004228442.1|//PREDICTED: receptor-like protein 12 isoform X1 [Solanum lycopersicum]
Solyc07g062060.3.1	1084	3186.69233617962	641.847170686145	-2.31175801346628	2.83129886257132e-07	Down	2.98605993874146e-08	NA	NA	NA	K07305//peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12]	gi|723718968|ref|XP_004244304.2|//PREDICTED: peptide methionine sulfoxide reductase B1, chloroplastic [Solanum lycopersicum]
Solyc01g094990.2.1	1689	30.2170625523587	5.83235322994334	-2.37321341805727	0.00740495109319193	Down	0.00208809826631187	NA	NA	NA	K08176//MFS transporter, PHS family, inorganic phosphate transporter;K03509//DNA polymerase eta [EC:2.7.7.7];K13675	gi|723661279|ref|XP_004231192.2|//PREDICTED: uncharacterized protein LOC101264770 [Solanum lycopersicum]
Solyc09g014990.3.1	1517	693.121344442433	6215.09641459595	3.16459692037501	1.18530750972652e-05	Up	1.70585667774493e-06	NA	NA	NA	K10268//F-box and leucine-rich repeat protein 2/20;K13424//WRKY transcription factor 33	gi|460401603|ref|XP_004246308.1|//PREDICTED: probable WRKY transcription factor 26 [Solanum lycopersicum]
Solyc12g005800.2.1	2442	47.6072479555296	1.65290072198404	-4.84810925316751	0.00104183500996838	Down	0.000232265364344002	GO:0043231//intracellular membrane-bounded organelle	GO:0003676//nucleic acid binding	NA	NA	gi|723747129|ref|XP_010313669.1|//PREDICTED: LOW QUALITY PROTEIN: MYB-like transcription factor ETC1 [Solanum lycopersicum]
Solyc03g034457.1.1	1543	6.82292202876708	27.1139140820521	1.99057175664748	0.0150023202161581	Up	0.00462908926305937	GO:0005634//nucleus;GO:0005737//cytoplasm	GO:0061630//ubiquitin protein ligase activity;GO:0008270//zinc ion binding;GO:0016874//ligase activity	GO:0043161//proteasome-mediated ubiquitin-dependent protein catabolic process;GO:0007275//multicellular organism development;GO:0042787//protein ubiquitination involved in ubiquitin-dependent protein catabolic process;GO:0006915//apoptotic process	K04506//E3 ubiquitin-protein ligase SIAH1 [EC:2.3.2.27]	gi|460377701|ref|XP_004234629.1|//PREDICTED: putative E3 ubiquitin-protein ligase SINA-like 6 [Solanum lycopersicum]
Solyc03g118970.3.1	1822	1162.5260984311	11360.4114516777	3.2886800775021	5.39664774018943e-28	Up	4.46569180826768e-30	NA	NA	NA	K03327//multidrug resistance protein, MATE family	gi|460380042|ref|XP_004235767.1|//PREDICTED: MATE efflux family protein 5 [Solanum lycopersicum]
Solyc02g086990.3.1	2768	182.773071502441	44.9286619223391	-2.02434552864588	0.000467309106837698	Down	9.56287086826809e-05	NA	NA	NA	K05391//cyclic nucleotide gated channel, other eukaryote	gi|460372955|ref|XP_004232288.1|//PREDICTED: putative cyclic nucleotide-gated ion channel 18 [Solanum lycopersicum]
Solyc06g071670.1.1	996	613.085774913259	292.735512958183	-1.06649115531026	5.52044938541791e-05	Down	9.13421605109219e-06	NA	NA	NA	NA	gi|460391855|ref|XP_004241534.1|//PREDICTED: uncharacterized protein LOC101265139 [Solanum lycopersicum]
Solyc06g007760.3.1	1564	3725.70604662738	1638.28274420856	-1.18532948497192	0.037074311490312	Down	0.0131614634946225	NA	NA	NA	NA	gi|460389624|ref|XP_004240451.1|//PREDICTED: uncharacterized protein LOC101255002 [Solanum lycopersicum]
Solyc07g047850.3.1	1555	152925.294622612	1646.38929709459	-6.5373777366662	1.20539732138567e-23	Down	1.5590907653229e-25	GO:0009521//photosystem;GO:0010287//plastoglobule;GO:0009535//chloroplast thylakoid membrane;GO:0009523//photosystem II;GO:0009534//chloroplast thylakoid;GO:0031224//intrinsic component of membrane;GO:0016021//integral component of membrane;GO:0009941//chloroplast envelope;GO:0009522//photosystem I	GO:0043169//cation binding;GO:0031409//pigment binding;GO:0046872//metal ion binding;GO:0046906//tetrapyrrole binding;GO:0016168//chlorophyll binding	GO:0009768//photosynthesis, light harvesting in photosystem I;GO:0006464//cellular protein modification process;GO:0006091//generation of precursor metabolites and energy;GO:0009416//response to light stimulus;GO:0018298//protein-chromophore linkage	K08913//light-harvesting complex II chlorophyll a/b binding protein 2	gi|407970998|ref|NP_001234739.1|//chlorophyll a-b binding protein 4, chloroplastic [Solanum lycopersicum]
Solyc12g049280.2.1	2592	1568.77336040854	649.8370590137	-1.27148701684137	0.000316480402872073	Down	6.21713464027507e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460414063|ref|XP_004252394.1|//PREDICTED: uncharacterized protein LOC101259317 [Solanum lycopersicum]
Solyc04g078500.1.1	696	29.8259670833487	120.769351961081	2.01761356157101	0.000152626419665381	Up	2.79504100125248e-05	NA	NA	NA	NA	gi|723695250|ref|XP_010320315.1|//PREDICTED: cyclin-J18 [Solanum lycopersicum]
Solyc05g006707.1.1	777	4.33300820713545	55.6071049767263	3.68182835501976	0.0112502006036918	Up	0.00333589331304488	NA	GO:0003824//catalytic activity	NA	NA	gi|971568197|ref|XP_015168811.1|//PREDICTED: HIPL1 protein-like isoform X1 [Solanum tuberosum]
Solyc08g077880.3.1	1357	10785.6355439502	1145.69424126873	-3.23481721051321	3.92150834373173e-12	Down	1.90170059460078e-13	NA	NA	NA	NA	gi|460400607|ref|XP_004245825.1|//PREDICTED: uncharacterized protein LOC101248227 [Solanum lycopersicum]
Solyc10g083120.2.1	1488	1798.34127712242	3630.95073029078	1.0136805220061	0.000683275337186027	Up	0.000145553844938801	NA	GO:0016879//ligase activity, forming carbon-nitrogen bonds	GO:0006464//cellular protein modification process	K10704//ubiquitin-conjugating enzyme E2 variant	gi|985801655|ref|NP_001306880.1|//ubiquitin-conjugating enzyme E2 variant 1D [Solanum lycopersicum]
Solyc11g072080.1.1	1203	151.357956676797	20.7786527632599	-2.8647904960372	0.00828295812121285	Down	0.00236126672547472	NA	NA	NA	NA	gi|460411685|ref|XP_004251236.1|//PREDICTED: F-box/kelch-repeat protein At5g26960 [Solanum lycopersicum]
Solyc12g062340.2.1	1736	38.8039272952338	2.75923196709716	-3.81386401962652	0.000308593536335555	Down	6.04925230203029e-05	GO:0016021//integral component of membrane;GO:0016023//cytoplasmic, membrane-bounded vesicle	NA	NA	K17086//transmembrane 9 superfamily member 2/4	gi|970034405|ref|XP_015078525.1|//PREDICTED: transmembrane 9 superfamily member 11-like [Solanum pennellii]
Solyc02g076830.1.1	1311	1.4341710030741	22.3592079051043	3.96258012148238	0.000141268966621758	Up	2.56283010492059e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460374529|ref|XP_004233063.1|//PREDICTED: epidermis-specific secreted glycoprotein EP1-like [Solanum lycopersicum]
Solyc06g060060.3.1	3588	1564.2340266909	186.139183088323	-3.07100268599922	8.34429840852676e-14	Down	3.20542599128867e-15	NA	NA	NA	K00858//NAD+ kinase [EC:2.7.1.23]	gi|460392893|ref|XP_004242047.1|//PREDICTED: NAD kinase 2, chloroplastic [Solanum lycopersicum]
Solyc07g065400.3.1	2655	271.843862850558	96.8220950473865	-1.48937004136094	0.0473666484344104	Down	0.0175709290748193	NA	NA	NA	K17496//mitochondrial import inner membrane translocase subunit TIM50	gi|723719079|ref|XP_010324430.1|//PREDICTED: LOW QUALITY PROTEIN: mitochondrial import inner membrane translocase subunit TIM50 [Solanum lycopersicum]
Solyc04g078700.3.1	2334	1020.88694884504	184.686653700086	-2.46667159417241	1.49230479946404e-06	Down	1.8122592204614e-07	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723695301|ref|XP_010320325.1|//PREDICTED: probable serine/threonine-protein kinase At1g01540 [Solanum lycopersicum]
Solyc08g076670.3.1	1222	1173.66075633055	4478.69381263503	1.93206257789162	9.73137643668176e-11	Up	5.86175052992311e-12	NA	NA	NA	K16302//metal transporter CNNM	gi|460400887|ref|XP_004245963.1|//PREDICTED: uncharacterized membrane protein At4g09580 [Solanum lycopersicum]
Solyc04g072760.3.1	2598	119.17167783417	25.1306526504846	-2.24552136371832	0.00270587085816963	Down	0.000670819557092822	GO:0031224//intrinsic component of membrane	GO:0015291//secondary active transmembrane transporter activity	GO:0015698//inorganic anion transport	K17470//sulfate transporter 1, high-affinity	gi|697100710|ref|XP_009592454.1|//PREDICTED: sulfate transporter 1.3-like [Nicotiana tomentosiformis];gi|460384365|ref|XP_004237882.1|//PREDICTED: sulfate transporter 1.3 [Solanum lycopersicum]
Solyc06g072018.1.1	692	1582.22917879565	12621.5927054721	2.99586348601276	7.83668760298971e-28	Up	6.60165274442998e-30	GO:0044464//cell part;GO:0016021//integral component of membrane;GO:0005622//intracellular	GO:0008320//protein transmembrane transporter activity;GO:0015450//P-P-bond-hydrolysis-driven protein transmembrane transporter activity	GO:0006886//intracellular protein transport;GO:0071806//protein transmembrane transport;GO:0006605//protein targeting	K07342//protein transport protein SEC61 subunit gamma and related proteins	gi|460391883|ref|XP_004241548.1|//PREDICTED: protein transport protein Sec61 subunit gamma-1-like [Solanum lycopersicum]
Solyc01g106480.3.1	2756	21502.099223827	4179.35521928519	-2.36312522613569	1.28138777522152e-10	Down	7.85224952461671e-12	NA	GO:0016615//malate dehydrogenase activity	GO:0043648//dicarboxylic acid metabolic process;GO:0005975//carbohydrate metabolic process;GO:0009060//aerobic respiration	K00026//malate dehydrogenase [EC:1.1.1.37]	gi|350536711|ref|NP_001234005.1|//glyoxisomal malate dehydrogenase [Solanum lycopersicum]
BGI_novel_G000125	5177	513.522853016353	34.9904937164026	-3.87539355512834	4.71359828590433e-07	Down	5.16549089032307e-08	NA	NA	NA	NA	gi|970014769|ref|XP_015068383.1|//PREDICTED: uncharacterized protein LOC107012923 [Solanum pennellii]
Solyc04g051360.3.1	1173	11.585844911787	3100.78127539315	8.06412469537761	1.6273507875862e-99	Up	2.4263467833401e-103	NA	NA	NA	K09286//EREBP-like factor	gi|460383548|ref|XP_004237483.1|//PREDICTED: ethylene-responsive transcription factor ABR1-like [Solanum lycopersicum]
Solyc07g005210.3.1	2384	2876.06778189187	383.029431275026	-2.90857052142775	2.91385920381634e-07	Down	3.08242598047963e-08	NA	GO:0005215//transporter activity	GO:0006810//transport;GO:0051234//establishment of localization	K03098//apolipoprotein D and lipocalin family protein	gi|350539918|ref|NP_001234832.1|//temperature-induced lipocalin' [Solanum lycopersicum]
Solyc05g050280.3.1	2198	970.868731554993	280.381781980388	-1.79188363388408	0.00480666361407207	Down	0.00127852808819212	NA	NA	NA	K14506//jasmonic acid-amino synthetase	gi|460388865|ref|XP_004240084.1|//PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.5 [Solanum lycopersicum];gi|971536926|ref|XP_015167702.1|//PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.5 [Solanum tuberosum];gi|86212374|gb|ABC87760.1|//jasmonic acid-amino acid-conjugating enzyme [Nicotiana attenuata]
Solyc08g007320.3.1	2149	366.320208805243	844.129487716717	1.20435902987094	0.000187140325879331	Up	3.49545315707965e-05	NA	NA	NA	NA	gi|460398019|ref|XP_004244562.1|//PREDICTED: uncharacterized protein LOC101263043 [Solanum lycopersicum]
Solyc07g005770.2.1	2787	45.4028171997769	19.0725539624859	-1.25128377347945	0.0404170811893574	Down	0.0145515352321456	NA	NA	NA	K13453;K13457//disease resistance protein RPM1	gi|971543767|ref|XP_015162516.1|//PREDICTED: putative late blight resistance protein homolog R1B-16 [Solanum tuberosum]
Solyc10g079750.2.1	3836	137.057457542838	2.59754555125244	-5.72148797086998	1.76796759954936e-13	Down	7.05789957923575e-15	NA	NA	NA	K14508//regulatory protein NPR1	gi|460407586|ref|XP_004249233.1|//PREDICTED: regulatory protein NPR5 [Solanum lycopersicum]
Solyc11g005670.2.1	2148	3414.61788449838	15272.6993572905	2.16115902556204	2.46106692560169e-08	Up	2.14568195131294e-09	GO:0005737//cytoplasm	NA	NA	K08770//ubiquitin C	gi|937924235|dbj|BAS99152.1|//Os06g0681400, partial [Oryza sativa Japonica Group];gi|460408912|ref|XP_004249885.1|//PREDICTED: polyubiquitin-like [Solanum lycopersicum]
Solyc02g061840.3.1	1308	905.112290831503	1815.79429863988	1.00443208358621	0.00763619172793166	Up	0.00215867295603972	NA	GO:0000166//nucleotide binding;GO:0003676//nucleic acid binding	NA	K12897//transformer-2 protein	gi|1781299|emb|CAA70700.1|//transformer-SR ribonucleoprotein [Nicotiana tabacum];gi|970007677|ref|XP_015064736.1|//PREDICTED: ankyrin repeat domain-containing protein, chloroplastic [Solanum pennellii]
Solyc11g040285.1.1	1278	32.4490476164731	69.9259983065308	1.10765281008021	0.0371702165011118	Up	0.0132010519912999	NA	NA	NA	NA	gi|970056257|ref|XP_015089781.1|//PREDICTED: uncharacterized protein LOC107032720 isoform X1 [Solanum pennellii];gi|565353569|ref|XP_006343702.1|//PREDICTED: uncharacterized protein LOC102605937 [Solanum tuberosum]
Solyc05g054880.3.1	2062	85.5565462768239	504.815986232158	2.56080744703518	2.93671132218998e-14	Up	1.05961553596239e-15	NA	NA	NA	K12843//U4/U6 small nuclear ribonucleoprotein PRP3	gi|723701363|ref|XP_010321364.1|//PREDICTED: U4/U6 small nuclear ribonucleoprotein Prp3-like [Solanum lycopersicum]
Solyc01g108840.3.1	3056	828.791579876222	222.204542129308	-1.89912103855317	0.000222040287955651	Down	4.21601769362638e-05	NA	NA	NA	K00924	gi|460369965|ref|XP_004230827.1|//PREDICTED: probable receptor protein kinase TMK1 isoform X1 [Solanum lycopersicum]
Solyc02g080820.3.1	1184	152.67259554603	360.365014106502	1.23901783024749	0.00031273629419749	Up	6.1397870193014e-05	NA	NA	NA	K13347//peroxisomal membrane protein 2	gi|460373791|ref|XP_004232697.1|//PREDICTED: peroxisomal membrane protein PMP22 [Solanum lycopersicum]
Solyc02g091620.2.1	4718	114.846261357032	768.045617276269	2.74148810810571	2.33460905385913e-07	Up	2.42528531128127e-08	NA	NA	NA	K08739//DNA mismatch repair protein MLH3	gi|565347670|ref|XP_006340847.1|//PREDICTED: DNA mismatch repair protein MLH3 isoform X1 [Solanum tuberosum];gi|698485889|ref|XP_009789706.1|//PREDICTED: uncharacterized protein LOC104237290 [Nicotiana sylvestris]
Solyc10g079930.1.1	1314	614.12912697963	7748.13006028397	3.65723423714844	2.29250359729989e-07	Up	2.37898092100898e-08	NA	NA	NA	K13495//cis-zeatin O-glucosyltransferase [EC:2.4.1.215]	gi|460407590|ref|XP_004249235.1|//PREDICTED: zeatin O-glucosyltransferase-like [Solanum lycopersicum]
Solyc01g057480.2.1	5570	363.027337868961	72.4694103431507	-2.32463413403474	3.96788477963993e-14	Down	1.46273969250928e-15	NA	NA	NA	K15255//ATP-dependent DNA helicase PIF1 [EC:3.6.4.12]	gi|971559373|ref|XP_015166438.1|//PREDICTED: ATP-dependent DNA helicase pif1-like [Solanum tuberosum];gi|698522160|ref|XP_009757892.1|//PREDICTED: uncharacterized protein LOC104210641 [Nicotiana sylvestris]
Solyc08g080960.3.1	2029	138.316748492423	505.434570639697	1.86954848484129	2.28910342842054e-06	Up	2.87545793714673e-07	NA	NA	NA	NA	gi|460400177|ref|XP_004245612.1|//PREDICTED: putative DNA-binding protein ESCAROLA [Solanum lycopersicum]
Solyc03g113410.2.1	2034	173.855058316535	1065.20779717367	2.61517794599685	5.32541521801481e-05	Up	8.77379426853492e-06	NA	NA	NA	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460380875|ref|XP_004236179.1|//PREDICTED: protein NRT1/ PTR FAMILY 2.11-like [Solanum lycopersicum]
Solyc10g007030.2.1	2005	404.058228709329	958.859569881909	1.24675632599488	0.00194132808455069	Up	0.000462610349058168	NA	NA	NA	NA	gi|460405597|ref|XP_004248262.1|//PREDICTED: uncharacterized protein LOC101266980 [Solanum lycopersicum]
Solyc06g064610.1.1	318	85.3554319574827	25.3374162746831	-1.75221355179739	0.00214231794189894	Down	0.00051545632603838	NA	NA	NA	NA	gi|698549449|ref|XP_009768657.1|//PREDICTED: uncharacterized protein LOC104219652 [Nicotiana sylvestris]
Solyc06g083980.2.1	1948	869.76667183428	3746.93926490128	2.10701225979819	2.6913632227289e-07	Up	2.82197880778902e-08	NA	NA	NA	K13422//transcription factor MYC2	gi|460393516|ref|XP_004242355.1|//PREDICTED: transcription factor bHLH3 [Solanum lycopersicum]
Solyc00g010750.2.1	2550	23.8769087056175	2.0449075110689	-3.54550856769007	0.00518302971490284	Down	0.0013890705102934	NA	NA	NA	NA	gi|970015294|ref|XP_015068675.1|//PREDICTED: guanylate-binding protein 2-like [Solanum pennellii]
Solyc02g089880.3.1	3616	204.58626512304	45.1618432662861	-2.17953301759247	0.000588501222369008	Down	0.000123587889027397	NA	NA	NA	K13648//alpha-1,4-galacturonosyltransferase [EC:2.4.1.43];K20893	gi|970012503|ref|XP_015067193.1|//PREDICTED: probable galacturonosyltransferase-like 1 [Solanum pennellii]
Solyc11g021290.2.1	587	11043.5377187166	2688.77924567207	-2.03817918630183	0.0360383813749837	Down	0.0127251970614739	GO:0031224//intrinsic component of membrane;GO:0009941//chloroplast envelope	NA	NA	NA	gi|813424324|ref|YP_009132102.1|//Ycf1 (chloroplast) [Solanum neorickii]
Solyc06g082810.3.1	1216	93.0592440735441	221.9866069202	1.25425126418188	0.0196431495753409	Up	0.00630121310740211	GO:0044464//cell part	GO:0005488//binding;GO:0004518//nuclease activity	NA	K13288//oligoribonuclease [EC:3.1.-.-]	gi|460393732|ref|XP_004242463.1|//PREDICTED: oligoribonuclease-like [Solanum lycopersicum]
Solyc02g062375.1.1	3217	973.452439444067	8886.48852716317	3.19043105530932	7.4660536068814e-21	Up	1.26066881016747e-22	NA	NA	NA	K01062//platelet-activating factor acetylhydrolase [EC:3.1.1.47]	gi|723677789|ref|XP_010317232.1|//PREDICTED: zinc finger CCCH domain-containing protein 44 isoform X1 [Solanum lycopersicum]
Solyc01g099350.3.1	2135	952.735773443415	1949.2326610666	1.03275823591414	0.00408483079593438	Up	0.00106597213367886	NA	GO:0005488//binding	NA	K20285//Rab9 effector protein with kelch motifs	gi|970003394|ref|XP_015062467.1|//PREDICTED: acyl-CoA-binding domain-containing protein 4 [Solanum pennellii];gi|460368730|ref|XP_004230218.1|//PREDICTED: acyl-CoA-binding domain-containing protein 4 [Solanum lycopersicum]
Solyc09g014450.3.1	1226	141.769347161239	366.797896864279	1.37143973470978	0.0118498450738029	Up	0.00353578387564456	NA	NA	NA	K04645//clathrin light chain B	gi|460401648|ref|XP_004246329.1|//PREDICTED: clathrin light chain 2-like [Solanum lycopersicum]
Solyc08g065700.2.1	1301	25.8605178570446	64.7053378064558	1.32313356549265	0.0477624308982049	Up	0.0177355500450245	NA	NA	NA	K11816//indole-3-pyruvate monooxygenase [EC:1.14.13.168]	gi|723732886|ref|XP_010326828.1|//PREDICTED: probable indole-3-pyruvate monooxygenase YUCCA10 [Solanum lycopersicum];gi|971573675|ref|XP_015170264.1|//PREDICTED: probable indole-3-pyruvate monooxygenase YUCCA10 [Solanum tuberosum]
Solyc04g071710.3.1	1708	723.027491959606	1822.53575550485	1.33382470891675	1.24691843804523e-07	Up	1.23632139749527e-08	NA	NA	NA	NA	gi|460384223|ref|XP_004237812.1|//PREDICTED: uncharacterized protein LOC101249632 [Solanum lycopersicum]
Solyc03g116590.3.1	970	1704.10214500755	5369.14186945305	1.65567971165033	1.78457375909614e-05	Up	2.67273645595955e-06	NA	NA	NA	K16911//ATP-dependent RNA helicase DDX21 [EC:3.6.4.13]	gi|460380570|ref|XP_004236028.1|//PREDICTED: uncharacterized protein LOC101247711 [Solanum lycopersicum]
Solyc10g084150.2.1	1605	2100.76612029042	398.278448584257	-2.39906623410132	0.00021088515451467	Down	3.98927299523613e-05	NA	NA	NA	K06966//uncharacterized protein	gi|384081614|ref|NP_001244911.1|//cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG6 [Solanum lycopersicum]
BGI_novel_G000442	223	1114.80523828012	6160.44552762564	2.46624300483454	0.0206052119614397	Up	0.00666666318120236	NA	NA	NA	K01191//alpha-mannosidase [EC:3.2.1.24]	gi|947068945|gb|KRH17836.1|//hypothetical protein GLYMA_13G020100 [Glycine max]
Solyc07g064720.3.1	1340	92.993063096312	746.941917012294	3.00580105572097	6.9286884720349e-07	Up	7.82021346851113e-08	NA	NA	NA	K21026;K01188//beta-glucosidase [EC:3.2.1.21];K00679//phospholipid:diacylglycerol acyltransferase [EC:2.3.1.158];K01206//alpha-L-fucosidase [EC:3.2.1.51];K10960//geranylgeranyl reductase [EC:1.3.1.83]	gi|723718273|ref|XP_004244106.2|//PREDICTED: GDSL esterase/lipase At5g55050-like isoform X1 [Solanum lycopersicum]
Solyc01g109070.2.1	616	210.857840470761	443.955735626403	1.07414517326681	0.000863377609603045	Up	0.000189101194052016	NA	NA	NA	K15455//diphthamide biosynthesis protein 3	gi|460369991|ref|XP_004230839.1|//PREDICTED: diphthamide biosynthesis protein 3 [Solanum lycopersicum]
Solyc11g065740.2.1	1145	3511.1205320547	888.925786864276	-1.98179663894627	1.0028042140899e-15	Down	2.96415588852428e-17	NA	NA	NA	NA	gi|460411077|ref|XP_004250941.1|//PREDICTED: uncharacterized protein LOC101249788 [Solanum lycopersicum]
Solyc01g073830.1.1	933	0.804857373461941	122.837211269758	7.25379879956102	3.13597155689351e-13	Up	1.29632937848326e-14	NA	NA	NA	K16219//protein N-terminal methyltransferase [EC:2.1.1.244];K20393//PRA1 family protein 3	gi|723659526|ref|XP_004229362.2|//PREDICTED: uncharacterized protein LOC101255237 [Solanum lycopersicum]
Solyc01g073720.2.1	551	4.13465736151335	77.9550638078989	4.23680305708125	2.47053782698803e-11	Up	1.36382381160328e-12	NA	NA	NA	NA	gi|723659435|ref|XP_010322022.1|//PREDICTED: uncharacterized protein LOC104647874 [Solanum lycopersicum]
Solyc12g013800.2.1	1161	963.393829203022	474.01573782247	-1.02319072418838	2.08766119885135e-05	Down	3.17880423337848e-06	NA	NA	NA	K10666//E3 ubiquitin-protein ligase RNF5 [EC:2.3.2.27]	gi|460412943|ref|XP_004251855.1|//PREDICTED: E3 ubiquitin-protein ligase RMA3-like isoform X1 [Solanum lycopersicum];gi|460412941|ref|XP_004251854.1|//PREDICTED: E3 ubiquitin-protein ligase RMA3-like isoform X2 [Solanum lycopersicum]
Solyc04g014320.1.1	327	139.766042562039	1.08643205277643	-7.00727212825892	7.05165593739106e-10	Down	4.89097703841321e-11	NA	NA	NA	NA	gi|723690976|ref|XP_010319536.1|//PREDICTED: gibberellin-regulated protein 14-like [Solanum lycopersicum]
Solyc09g091510.3.1	1452	6803.37973540186	63.2656589306833	-6.7486851996289	2.15331184528205e-46	Down	4.01317997107881e-49	NA	GO:0016747//transferase activity, transferring acyl groups other than amino-acyl groups	GO:0009699//phenylpropanoid biosynthetic process	K00660//chalcone synthase [EC:2.3.1.74]	gi|807066326|ref|NP_001234033.2|//chalcone synthase 1 [Solanum lycopersicum]
Solyc01g094830.3.1	2162	514.389988832502	192.951493700336	-1.41462435260655	8.63289703816668e-07	Down	9.97860955544762e-08	NA	NA	NA	K03327//multidrug resistance protein, MATE family	gi|723661219|ref|XP_004229913.2|//PREDICTED: protein TRANSPARENT TESTA 12 [Solanum lycopersicum];gi|460368079|ref|XP_004229897.1|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-2 [Solanum lycopersicum]
Solyc10g081000.1.1	453	132.349387996714	331.622157339912	1.32518888013508	2.62889638925389e-05	Up	4.0803356809502e-06	NA	NA	NA	NA	gi|460407780|ref|XP_004249328.1|//PREDICTED: uncharacterized protein LOC101250353 [Solanum lycopersicum]
Solyc06g068440.3.1	1343	494.87428695585	94.6017439691915	-2.38712339874384	0.000151904978669735	Down	2.77962167651516e-05	NA	GO:0016620//oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor;GO:0016616//oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;GO:0048037//cofactor binding	GO:0008152//metabolic process	K09753//cinnamoyl-CoA reductase [EC:1.2.1.44]	gi|350538717|ref|NP_001234612.1|//cinnamoyl-CoA reductase [Solanum lycopersicum]
Solyc03g123390.3.1	2848	3549.79323259767	412.168798249214	-3.10642779324751	0.00151853530797086	Down	0.00035218155234064	NA	NA	NA	NA	gi|460379590|ref|XP_004235544.1|//PREDICTED: uncharacterized protein LOC101251165 [Solanum lycopersicum]
Solyc09g098770.2.1	2053	25.5877565514746	0.800927215201033	-4.99763870933349	4.44720253074935e-05	Down	7.19263895218482e-06	NA	GO:0005506//iron ion binding;GO:0004497//monooxygenase activity	NA	K20513//ferruginol synthase [EC:1.14.13.190];K20556	gi|698582548|ref|XP_009777857.1|//PREDICTED: geraniol 8-hydroxylase-like [Nicotiana sylvestris]
Solyc09g072710.3.1	3425	2465.60913064588	937.84814848052	-1.39451785651843	0.00187092226424265	Down	0.000443950019910867	GO:0043231//intracellular membrane-bounded organelle	GO:0080096//phosphatidate-sterol O-acyltransferase activity;GO:0004607//phosphatidylcholine-sterol O-acyltransferase activity;GO:0080095//phosphatidylethanolamine-sterol O-acyltransferase activity;GO:0008374//O-acyltransferase activity	GO:0016127//sterol catabolic process;GO:0010150//leaf senescence;GO:0044238//primary metabolic process;GO:0034434//sterol esterification	K00679//phospholipid:diacylglycerol acyltransferase [EC:2.3.1.158]	gi|971586452|ref|XP_015160795.1|//PREDICTED: phospholipid--sterol O-acyltransferase isoform X1 [Solanum tuberosum];gi|460404065|ref|XP_004247505.1|//PREDICTED: phospholipid--sterol O-acyltransferase isoform X2 [Solanum lycopersicum]
Solyc09g083150.3.1	1154	3250.84984433577	432.737639870585	-2.90925240185306	1.9033546368316e-20	Down	3.30611026078546e-22	NA	NA	NA	NA	gi|460404323|ref|XP_004247632.1|//PREDICTED: uncharacterized protein LOC101265478 [Solanum lycopersicum]
Solyc02g085050.3.1	1063	357.955429148734	972.725769091002	1.44225317627796	1.39788536553074e-06	Up	1.68717489696904e-07	GO:0044424//intracellular part	GO:0046872//metal ion binding;GO:0016462//pyrophosphatase activity	GO:0006793//phosphorus metabolic process	K01507//inorganic pyrophosphatase [EC:3.6.1.1]	gi|460373228|ref|XP_004232423.1|//PREDICTED: soluble inorganic pyrophosphatase [Solanum lycopersicum]
Solyc02g071000.1.1	899	8523.64058374818	475.088856108101	-4.16520048852572	6.13015252338303e-06	Down	8.35389802649783e-07	GO:0009521//photosystem;GO:0010287//plastoglobule;GO:0009535//chloroplast thylakoid membrane;GO:0009523//photosystem II;GO:0009534//chloroplast thylakoid;GO:0031224//intrinsic component of membrane;GO:0016021//integral component of membrane;GO:0009941//chloroplast envelope;GO:0009522//photosystem I	GO:0043169//cation binding;GO:0031409//pigment binding;GO:0046872//metal ion binding;GO:0046906//tetrapyrrole binding;GO:0016168//chlorophyll binding	GO:0009768//photosynthesis, light harvesting in photosystem I;GO:0006464//cellular protein modification process;GO:0006091//generation of precursor metabolites and energy;GO:0009416//response to light stimulus;GO:0018298//protein-chromophore linkage	K08912//light-harvesting complex II chlorophyll a/b binding protein 1	gi|723675653|ref|XP_010316911.1|//PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like [Solanum lycopersicum]
Solyc02g084340.2.1	2685	592.665312999847	1259.91833039899	1.0880406910348	0.000295065056880448	Up	5.75656220259529e-05	NA	NA	NA	K12811//ATP-dependent RNA helicase DDX46/PRP5 [EC:3.6.4.13];K13091//RNA-binding protein 39	gi|460373330|ref|XP_004232473.1|//PREDICTED: pre-mRNA-splicing factor CWC25 homolog [Solanum lycopersicum]
Solyc06g071430.3.1	3775	4672.73742559267	1751.82859902399	-1.41540634348246	6.87371226416378e-06	Down	9.47223581355803e-07	NA	NA	NA	K18681//DIS3-like exonuclease 1 [EC:3.1.13.-]	gi|460391779|ref|XP_004241496.1|//PREDICTED: protein EXECUTER 1, chloroplastic isoform X2 [Solanum lycopersicum]
Solyc07g053760.3.1	2051	569.630464687103	5989.664397681	3.39437695976926	3.3361895261701e-16	Up	9.40121992613909e-18	NA	GO:0016787//hydrolase activity;GO:0004722//protein serine/threonine phosphatase activity	GO:0006470//protein dephosphorylation	K17506//protein phosphatase 1L [EC:3.1.3.16]	gi|567909885|ref|XP_006447256.1|//hypothetical protein CICLE_v10016165mg [Citrus clementina];gi|460395598|ref|XP_004243369.1|//PREDICTED: probable protein phosphatase 2C 58 isoform X1 [Solanum lycopersicum]
Solyc05g051850.3.1	2017	13483.8834234035	1261.04161642602	-3.41854826663958	1.54865643894675e-06	Down	1.88877436567533e-07	GO:0044424//intracellular part	GO:0016872//intramolecular lyase activity	GO:0006644//phospholipid metabolic process;GO:0006020//inositol metabolic process	K01858//myo-inositol-1-phosphate synthase [EC:5.5.1.4]	gi|849564061|ref|NP_001296998.1|//inositol-3-phosphate synthase [Solanum lycopersicum]
Solyc03g044625.1.1	1459	51.8155568874799	10.7320199731439	-2.27146366702824	0.0147398860283353	Down	0.00453547633680886	NA	NA	NA	NA	gi|970015240|ref|XP_015068642.1|//PREDICTED: uncharacterized protein LOC107013178 [Solanum pennellii]
Solyc11g016930.1.1	3458	173.675524027824	8742.57504409014	5.65359191924535	3.58380606805825e-23	Up	4.78232657061597e-25	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13415//protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1]	gi|460410328|ref|XP_004250582.1|//PREDICTED: F-box protein At3g07870-like [Solanum lycopersicum];gi|723742568|ref|XP_010312813.1|//PREDICTED: F-box protein At3g07870-like [Solanum lycopersicum];gi|970061270|ref|XP_015057425.1|//PREDICTED: F-box protein At3g07870-like [Solanum pennellii];gi|460409877|ref|XP_004250363.1|//PREDICTED: F-box protein CPR30-like [Solanum lycopersicum]
Solyc10g084120.2.1	1155	4.32900577725078	0.391200655039435	-3.46805503479072	0.0455834168809501	Down	0.0167719923669562	NA	NA	NA	K09872//aquaporin PIP	gi|565324173|ref|NP_001274308.1|//aquaporin PIP2-1-like [Solanum lycopersicum]
Solyc02g093720.3.1	2010	3157.38263832234	247.430647625899	-3.67363299547696	7.85407402663933e-05	Down	1.34023970828816e-05	NA	NA	NA	NA	gi|460371988|ref|XP_004231816.1|//PREDICTED: histone H3.v1-like [Solanum lycopersicum]
Solyc01g079920.3.1	1737	0.359883936026624	4.17308693346748	3.53551136314193	0.0392519293434694	Up	0.0140632751173933	NA	NA	NA	K00924;K02882//large subunit ribosomal protein L18Ae	gi|460367401|ref|XP_004229562.1|//PREDICTED: basic 7S globulin-like [Solanum lycopersicum]
Solyc11g007980.2.1	1566	73.7124213305546	2331.39936924785	4.9831446000687	1.56004658603536e-21	Up	2.47718743719646e-23	NA	GO:0005506//iron ion binding;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30];K15472//premnaspirodiene oxygenase [EC:1.14.13.121]	gi|460409200|ref|XP_004250027.1|//PREDICTED: cytochrome P450 71D7 [Solanum lycopersicum]
Solyc12g056930.2.1	3102	840.557622663608	3275.22888835843	1.96217710357547	4.26654800494262e-09	Up	3.33811102667905e-10	GO:0031224//intrinsic component of membrane;GO:0016021//integral component of membrane;GO:0005886//plasma membrane	GO:0015291//secondary active transmembrane transporter activity;GO:0008271//secondary active sulfate transmembrane transporter activity	GO:1902358//sulfate transmembrane transport;GO:0015698//inorganic anion transport	K17470//sulfate transporter 1, high-affinity	gi|565389053|ref|XP_006360279.1|//PREDICTED: sulfate transporter 1.2-like [Solanum tuberosum];gi|920500832|ref|NP_001234569.2|//sulfate transporter 2 [Solanum lycopersicum]
Solyc07g006230.1.1	396	179.159776050269	21.7137871785971	-3.04456348937036	5.33280555620767e-05	Down	8.78849685321073e-06	NA	NA	NA	NA	NA
Solyc01g111740.3.1	4810	183.5524832617	67.110720739568	-1.45157747641168	0.0266045752362182	Down	0.00897165618615125	NA	NA	NA	NA	gi|460371248|ref|XP_004231454.1|//PREDICTED: uncharacterized protein LOC101255743 [Solanum lycopersicum]
Solyc08g015860.3.1	1909	1373.23653452281	3152.38921403381	1.19886552473951	0.00240383881581296	Up	0.000586802609391645	NA	GO:0005092//GDP-dissociation inhibitor activity	GO:0006810//transport	K17255//Rab GDP dissociation inhibitor	gi|460398478|ref|XP_004244786.1|//PREDICTED: guanosine nucleotide diphosphate dissociation inhibitor 2 [Solanum lycopersicum]
Solyc02g090920.2.1	3779	40.5435264095688	145.954158674498	1.84797183553356	0.000140966696974862	Up	2.55629558961796e-05	NA	NA	NA	K16818//phospholipase A1 [EC:3.1.1.32];K03147//phosphomethylpyrimidine synthase [EC:4.1.99.17]	gi|460372415|ref|XP_004232026.1|//PREDICTED: uncharacterized protein LOC101267367 [Solanum lycopersicum];gi|970008722|ref|XP_015065232.1|//PREDICTED: uncharacterized protein LOC107010460 [Solanum pennellii]
Solyc03g118120.3.1	830	1538.13829148295	280.332611279128	-2.45597373054908	0.000390152394734347	Down	7.82253515459986e-05	NA	NA	NA	NA	gi|460380223|ref|XP_004235857.1|//PREDICTED: uncharacterized protein At4g14100-like [Solanum lycopersicum]
Solyc02g031710.3.1	1293	891.739209170572	364.553238838654	-1.29049233383927	0.0434155269947229	Down	0.0158449279768731	NA	NA	NA	K19042//E3 ubiquitin-protein ligase BOI and related proteins [EC:2.3.2.27]	gi|460371510|ref|XP_004231579.1|//PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 3 [Solanum lycopersicum]
Solyc02g065470.1.1	543	389.264896078983	1252.39531038514	1.68586585802602	1.0161692829993e-07	Up	9.90109775518181e-09	NA	NA	NA	K13449//pathogenesis-related protein 1;K20412//peptidase inhibitor 16	gi|723677197|ref|XP_010317149.1|//PREDICTED: STS14 protein [Solanum lycopersicum]
Solyc07g008360.2.1	2194	21.9938636826622	2.45608313710903	-3.16266976493973	0.00348043189632236	Down	0.000889437941001419	NA	GO:0032559//adenyl ribonucleotide binding;GO:0016703//oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases);GO:0016405//CoA-ligase activity	GO:0006725//cellular aromatic compound metabolic process	K01904//4-coumarate--CoA ligase [EC:6.2.1.12]	gi|460394398|ref|XP_004242790.1|//PREDICTED: 4-coumarate--CoA ligase 2 [Solanum lycopersicum]
Solyc09g008760.1.1	714	7.59901415937481	72.6273859883472	3.25662948429253	0.000205786254178144	Up	3.88514752278328e-05	NA	NA	NA	NA	gi|460402166|ref|XP_004246585.1|//PREDICTED: probable cytochrome P450 556A1 [Solanum lycopersicum]
Solyc03g117550.1.1	2103	222.756960762177	40.4328089574574	-2.46187217467977	0.00979330110612106	Down	0.00285717040993028	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460380302|ref|XP_004235896.1|//PREDICTED: putative receptor-like protein kinase At1g80870 [Solanum lycopersicum]
Solyc01g087775.1.1	507	26.8504967793047	4.09030985921086	-2.71466673773796	0.005640935979455	Down	0.00153323785456187	NA	NA	NA	NA	gi|565357136|ref|XP_006345404.1|//PREDICTED: subtilisin-like protease SBT1.7 [Solanum tuberosum]
Solyc12g013510.1.1	420	92.0710235080028	209.718713060143	1.18763650843513	0.0204024169859368	Up	0.00658660107034436	GO:0043231//intracellular membrane-bounded organelle;GO:0000785//chromatin	GO:0003676//nucleic acid binding	GO:0034728//nucleosome organization	K11252//histone H2B	gi|970067938|ref|XP_015061084.1|//PREDICTED: histone H2B-like [Solanum pennellii]
Solyc01g100000.3.1	1153	95.328941270919	802.398821792653	3.0733333086141	1.6173059422638e-14	Up	5.60040711332591e-16	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K16219//protein N-terminal methyltransferase [EC:2.1.1.244];K08235//xyloglucan:xyloglucosyl transferase [EC:2.4.1.207]	gi|460368827|ref|XP_004230266.1|//PREDICTED: F-box protein PP2-B15-like [Solanum lycopersicum]
Solyc03g078730.2.1	477	44.1526155953969	2.97723087207026	-3.89045589935521	2.7187835882652e-05	Down	4.23403825546892e-06	NA	NA	NA	K13493//cytokinin-N-glucosyltransferase [EC:2.4.1.-];K00699//glucuronosyltransferase [EC:2.4.1.17]	gi|723682609|ref|XP_010318075.1|//PREDICTED: LOW QUALITY PROTEIN: 7-deoxyloganetic acid glucosyltransferase-like [Solanum lycopersicum]
Solyc10g086150.2.1	1367	19363.8579797326	2677.80830110901	-2.854241828352	7.48101583212902e-10	Down	5.22566858111294e-11	GO:0009536//plastid	GO:0003676//nucleic acid binding	NA	K11294//nucleolin	gi|723739866|ref|XP_010312344.1|//PREDICTED: 29 kDa ribonucleoprotein B, chloroplastic-like [Solanum lycopersicum]
Solyc09g075900.3.1	1573	182.798744607053	29.650409133989	-2.62413224535777	0.0119940610886359	Down	0.00358418025002215	NA	GO:0016765//transferase activity, transferring alkyl or aryl (other than methyl) groups	GO:0006596//polyamine biosynthetic process	K18787//thermospermine synthase [EC:2.5.1.79]	gi|460403778|ref|XP_004247364.1|//PREDICTED: thermospermine synthase ACAULIS5-like [Solanum lycopersicum]
Solyc07g063000.3.1	3467	210.697975200988	513.39967912239	1.28490594424042	0.00178377861118147	Up	0.000420878135111776	GO:0016020//membrane	GO:0000166//nucleotide binding;GO:0004672//protein kinase activity	NA	K20718;K13415//protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1]	gi|460397368|ref|XP_004244239.1|//PREDICTED: phytosulfokine receptor 2 [Solanum lycopersicum]
Solyc09g005010.3.1	8001	1417.56408252809	3412.46790637919	1.26740152257783	0.000360128537328916	Up	7.16417922962735e-05	NA	GO:0022892//substrate-specific transporter activity	GO:0015031//protein transport	K14293//importin subunit beta-1	gi|460402566|ref|XP_004246782.1|//PREDICTED: importin subunit beta-1-like [Solanum lycopersicum];gi|698473392|ref|XP_009784457.1|//PREDICTED: importin subunit beta-1-like [Nicotiana sylvestris]
Solyc07g006480.3.1	3645	1083.41435745663	5469.23689731705	2.33575443837161	0.00147528937049096	Up	0.000340887088402916	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460394130|ref|XP_004242658.1|//PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 [Solanum lycopersicum]
Solyc07g063410.3.1	1279	577.508073222343	1548.20748954084	1.42268581347749	0.0195571595164686	Up	0.00626852596847003	NA	NA	NA	K12581//CCR4-NOT transcription complex subunit 7/8;K13126//polyadenylate-binding protein;K05941//glutathione gamma-glutamylcysteinyltransferase [EC:2.3.2.15];K01054//acylglycerol lipase [EC:3.1.1.23]	gi|983616464|ref|NP_001306107.1|//JA2-like [Solanum lycopersicum]
Solyc11g051200.1.1	627	3642.79700658564	16412.734248546	2.17169709311053	0.022394395001682	Up	0.00734403933296549	NA	NA	NA	NA	gi|702283699|ref|XP_010046011.1|//PREDICTED: uncharacterized protein LOC104434852 [Eucalyptus grandis];gi|947068892|gb|KRH17783.1|//hypothetical protein GLYMA_13G015500, partial [Glycine max]
Solyc07g054830.3.1	3569	659.520058938528	4892.97142644687	2.89122241383928	5.10052439397293e-07	Up	5.62753548760991e-08	NA	NA	NA	K00901//diacylglycerol kinase (ATP) [EC:2.7.1.107]	gi|10798895|gb|AAG23131.1|//diacylglycerol kinase variant B [Solanum lycopersicum];gi|10798894|gb|AAG23130.1|//diacylglycerol kinase variant A [Solanum lycopersicum];gi|952977785|ref|NP_001304033.1|//calmodulin-binding diacylglycerol kinase isoform 2 [Solanum lycopersicum]
Solyc01g095680.2.1	1154	459.672077096239	95.647795124269	-2.26480141489904	4.59333962772688e-09	Down	3.61604789539257e-10	NA	NA	NA	NA	gi|460370741|ref|XP_004231208.1|//PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Solanum lycopersicum]
Solyc04g050180.3.1	1055	284.318791490678	118.849288624468	-1.25837618623737	0.00349715909258346	Down	0.000894885834597638	NA	NA	NA	NA	gi|969995741|ref|XP_015076978.1|//PREDICTED: pheophytinase, chloroplastic [Solanum pennellii];gi|971543524|ref|XP_015162442.1|//PREDICTED: pheophytinase, chloroplastic-like isoform X1 [Solanum tuberosum]
Solyc00g233480.1.1	552	11.9423423483752	92.1074664508068	2.94723227753078	0.0202951435729478	Up	0.00654743058088056	NA	NA	NA	K05681//ATP-binding cassette, subfamily G (WHITE), member 2	gi|970030690|ref|XP_015076630.1|//PREDICTED: ABC transporter G family member 11-like [Solanum pennellii]
Solyc02g067890.3.1	2828	933.535058568043	355.133177263655	-1.39434405719431	0.000103889939118291	Down	1.82082337011408e-05	GO:0016021//integral component of membrane	GO:0008168//methyltransferase activity	GO:0032259//methylation	K16302//metal transporter CNNM;K15449//tRNA wybutosine-synthesizing protein 1 [EC:4.1.3.44]	gi|971568039|ref|XP_015168775.1|//PREDICTED: probable methyltransferase PMT9 isoform X2 [Solanum tuberosum];gi|460375042|ref|XP_004233317.1|//PREDICTED: probable methyltransferase PMT9 isoform X1 [Solanum lycopersicum]
Solyc12g041880.2.1	2844	1482.54485314187	431.717749283131	-1.7799154400602	6.05355618706216e-05	Down	1.01200982178969e-05	NA	NA	NA	NA	gi|460413824|ref|XP_004252278.1|//PREDICTED: uncharacterized protein LOC101248551 [Solanum lycopersicum]
Solyc08g062260.1.1	576	7.69341832074055	0.739298290953853	-3.37939627199932	0.025191412730355	Down	0.00842280349602222	NA	NA	NA	K15255//ATP-dependent DNA helicase PIF1 [EC:3.6.4.12]	gi|971570010|ref|XP_015169312.1|//PREDICTED: uncharacterized protein LOC107062781 [Solanum tuberosum]
Solyc06g076350.3.1	1596	99.8087427010674	795.066820842269	2.99383801738049	1.10552100317968e-21	Up	1.73484546868437e-23	GO:0043231//intracellular membrane-bounded organelle;GO:0005634//nucleus	GO:0003677//DNA binding;GO:0003676//nucleic acid binding	GO:0006355//regulation of transcription, DNA-templated	K14491//two-component response regulator ARR-B family	gi|460391206|ref|XP_004241214.1|//PREDICTED: transcription factor PCL1-like [Solanum lycopersicum]
Solyc03g113780.3.1	2041	2123.39328940704	422.073076051221	-2.33080690008876	5.38950537034248e-12	Down	2.67386001488216e-13	NA	NA	NA	K00275//pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5];K17759//NAD(P)H-hydrate epimerase [EC:5.1.99.6]	gi|460380816|ref|XP_004236150.1|//PREDICTED: pyridoxine/pyridoxamine 5'-phosphate oxidase 1, chloroplastic-like [Solanum lycopersicum]
Solyc06g076490.3.1	1792	620.244216476791	1628.97670252387	1.3930576879653	0.000324895391496935	Up	6.40635388779927e-05	NA	NA	NA	NA	gi|460391182|ref|XP_004241202.1|//PREDICTED: uncharacterized protein LOC101266832 [Solanum lycopersicum]
Solyc02g072050.1.1	1506	12.5625878566531	48.3710536177319	1.94501027705577	0.0418325140981353	Up	0.0151562560397299	NA	NA	NA	NA	gi|723675301|ref|XP_010316852.1|//PREDICTED: uncharacterized protein LOC104645868 [Solanum lycopersicum]
Solyc06g051830.2.1	4828	724.406594099687	79.8488508946612	-3.18145612779049	3.53736596329575e-10	Down	2.33512566013e-11	GO:0044464//cell part	NA	NA	K03549//KUP system potassium uptake protein	gi|723706296|ref|XP_010322206.1|//PREDICTED: potassium transporter 26-like [Solanum lycopersicum]
Solyc05g051425.1.1	930	330.34738896921	10.8417817702882	-4.92931016381806	1.18941260226907e-24	Down	1.38324411774247e-26	NA	NA	NA	K02183//calmodulin	gi|460388746|ref|XP_004240026.1|//PREDICTED: ovarian cancer-associated gene 2 protein homolog [Solanum lycopersicum]
Solyc05g013160.3.1	3320	2105.47858564532	465.504222578975	-2.17728204263874	1.83049859602944e-07	Down	1.86679743504419e-08	GO:0009536//plastid;GO:0009507//chloroplast	GO:0008757//S-adenosylmethionine-dependent methyltransferase activity;GO:0030785//[ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	GO:0006730//one-carbon metabolic process;GO:0032259//methylation	K00592//[ribulose-bisphosphate carboxylase]-lysine N-methyltransferase [EC:2.1.1.127]	gi|460386845|ref|XP_004239106.1|//PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic [Solanum lycopersicum]
Solyc01g100840.3.1	671	154.523893446188	331.89423702726	1.10289364498051	0.00027665756166607	Up	5.36547373396661e-05	GO:0044431//Golgi apparatus part	NA	GO:0048193//Golgi vesicle transport	K20303//trafficking protein particle complex subunit 4	gi|723663268|ref|XP_010313688.1|//PREDICTED: trafficking protein particle complex subunit 4 [Solanum lycopersicum]
Solyc06g008770.2.1	3962	57.2596162955798	27.9695691914078	-1.0336599701772	0.0483206414380688	Down	0.0179644430335209	NA	GO:0032559//adenyl ribonucleotide binding	GO:0012501//programmed cell death;GO:0006950//response to stress	K13453;K13457//disease resistance protein RPM1	gi|115381105|gb|ABI96216.1|//NBS-LRR resistance protein-like protein [Solanum lycopersicum]
Solyc03g096850.3.1	1266	7304.05149449523	2050.21057294647	-1.83292484293625	2.89059381962128e-06	Down	3.70644205289146e-07	NA	GO:0043169//cation binding	NA	K20093//DNA excision repair protein ERCC-6-like [EC:3.6.4.12];K00366//ferredoxin-nitrite reductase [EC:1.7.7.1]	gi|460379113|ref|XP_004235309.1|//PREDICTED: uncharacterized protein LOC101255672 [Solanum lycopersicum]
Solyc02g084870.3.1	3305	431.280542169195	978.31514663735	1.18167265000305	0.0108488119096923	Up	0.00320393382885389	GO:0005622//intracellular	GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0004702//receptor signaling protein serine/threonine kinase activity;GO:0004707//MAP kinase activity	GO:0000165//MAPK cascade;GO:0006464//cellular protein modification process	K04371//mitogen-activated protein kinase 1/3 [EC:2.7.11.24];K20537	gi|350540664|ref|NP_001234876.1|//mitogen-activated protein kinase 8 [Solanum lycopersicum]
Solyc03g046250.1.1	267	13.4056220566695	0.400299265029357	-5.06561538868835	0.000548092963135703	Down	0.000114081675771355	NA	NA	NA	NA	gi|970012763|ref|XP_015067331.1|//PREDICTED: probable disease resistance protein At4g27220 [Solanum pennellii]
Solyc08g075280.3.1	1551	499.204333091444	170.335542389618	-1.55125095618098	0.00233612806761333	Down	0.000567487200560463	NA	NA	NA	NA	gi|460401005|ref|XP_004246020.1|//PREDICTED: uncharacterized protein LOC101255324 [Solanum lycopersicum]
Solyc02g064830.3.1	1901	15.6700529302131	180.04694715999	3.52229117962891	2.02440405203084e-07	Up	2.08114893972755e-08	NA	NA	NA	K14487//auxin responsive GH3 gene family	gi|460375303|ref|XP_004233446.1|//PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.1 [Solanum lycopersicum]
Solyc12g013900.2.1	1591	5272.04481930737	24004.2678038536	2.1868563901895	2.85070821643373e-08	Up	2.50876774228419e-09	NA	GO:0009055//electron carrier activity	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6];K14306//nuclear pore complex protein Nup62	gi|460412959|ref|XP_004251863.1|//PREDICTED: early nodulin-like protein 2 [Solanum lycopersicum]
Solyc01g105100.3.1	1908	1308.04538600991	4621.37364100123	1.82090913730103	3.70404131104436e-11	Up	2.08894233771065e-12	NA	NA	NA	K20367//endoplasmic reticulum-Golgi intermediate compartment protein 3	gi|460369416|ref|XP_004230558.1|//PREDICTED: endoplasmic reticulum-Golgi intermediate compartment protein 3-like [Solanum lycopersicum]
Solyc04g009620.3.1	1939	39.1460778282843	298.666694847122	2.93159669608254	9.85668916245747e-06	Up	1.39943823690922e-06	GO:0005730//nucleolus;GO:0005829//cytosol;GO:0009536//plastid;GO:0009570//chloroplast stroma	GO:0010181//FMN binding;GO:0016838//carbon-oxygen lyase activity, acting on phosphates;GO:0004107//chorismate synthase activity	GO:0008652//cellular amino acid biosynthetic process;GO:0009423//chorismate biosynthetic process;GO:0009073//aromatic amino acid family biosynthetic process	K01736//chorismate synthase [EC:4.2.3.5]	gi|350534710|ref|NP_001234411.1|//chorismate synthase 2, chloroplastic precursor [Solanum lycopersicum];gi|747074712|ref|XP_011084359.1|//PREDICTED: chorismate synthase 1, chloroplastic [Sesamum indicum]
Solyc04g074850.3.1	2207	1336.12837447344	200.804960712663	-2.73419181243779	7.17350960837365e-06	Down	9.91745457635973e-07	GO:0044464//cell part	GO:0015291//secondary active transmembrane transporter activity	GO:0015893//drug transport	K03327//multidrug resistance protein, MATE family	gi|806638729|ref|NP_001234398.2|//ripening regulated protein DDTFR18 [Solanum lycopersicum]
Solyc02g067460.3.1	1169	10529.7341378675	4795.92887655052	-1.13458684173568	2.02143533624667e-05	Down	3.06666237458026e-06	GO:0016021//integral component of membrane;GO:0031966//mitochondrial membrane	GO:0005244//voltage-gated ion channel activity;GO:0022829//wide pore channel activity	GO:0043269//regulation of ion transport	K15040//voltage-dependent anion channel protein 2	gi|460375108|ref|XP_004233349.1|//PREDICTED: mitochondrial outer membrane protein porin of 34 kDa [Solanum lycopersicum]
Solyc10g079550.2.1	1127	66.8885120702468	21.9923347662309	-1.60475768021963	0.0067043160113196	Down	0.00186400376951069	NA	NA	NA	K17969//mitochondrial fission 1 protein	gi|460407616|ref|XP_004249248.1|//PREDICTED: mitochondrial fission 1 protein A-like [Solanum lycopersicum]
Solyc06g053140.3.1	917	2726.64522135757	533.169540551106	-2.35446072741275	8.91706133374725e-08	Down	8.62855644192928e-09	NA	NA	NA	K15692//E3 ubiquitin-protein ligase RNF13 [EC:2.3.2.27]	gi|460390708|ref|XP_004240967.1|//PREDICTED: rhodanese-like domain-containing protein 14, chloroplastic [Solanum lycopersicum]
Solyc12g005550.2.1	629	19.1181782952233	174.886963784863	3.193405788034	1.22750367886393e-07	Up	1.21478390762775e-08	NA	NA	NA	NA	gi|723749353|ref|XP_010314045.1|//PREDICTED: uncharacterized protein LOC104644892 [Solanum lycopersicum]
Solyc09g009720.1.1	504	244.293184694957	564.719874893933	1.20892179100745	2.28477116470068e-05	Up	3.50789191419491e-06	NA	NA	NA	K10575//ubiquitin-conjugating enzyme E2 G1 [EC:2.3.2.23]	gi|460402038|ref|XP_004246522.1|//PREDICTED: ubiquitin-conjugating enzyme E2 7-like [Solanum lycopersicum]
Solyc08g067930.3.1	2613	17.2883451891017	2.76067831800314	-2.64670508733049	0.0103453386282546	Down	0.0030344218602108	NA	NA	NA	K15044//Arf-GAP domain and FG repeats-containing protein 1	gi|723723578|ref|XP_010325273.1|//PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD14 [Solanum lycopersicum]
Solyc04g078490.1.1	1605	547.071926575232	1183.42365317238	1.11316420603107	0.000272255919774696	Up	5.26996045694796e-05	NA	NA	NA	K10268//F-box and leucine-rich repeat protein 2/20	gi|460384863|ref|XP_004238126.1|//PREDICTED: F-box protein At1g47056-like [Solanum lycopersicum]
Solyc04g079470.3.1	1609	159.292717805737	631.587065369661	1.98730131131862	0.012032455529929	Up	0.00359699915573395	NA	NA	NA	K13963//serpin B	gi|460384998|ref|XP_004238193.1|//PREDICTED: serpin-ZX-like isoform X2 [Solanum lycopersicum]
Solyc02g082250.3.1	5023	890.641357540271	3153.61582713279	1.82409041102352	7.79570324035075e-05	Up	1.32795451798132e-05	GO:0044424//intracellular part	GO:0016209//antioxidant activity;GO:0003824//catalytic activity;GO:0050662//coenzyme binding	GO:0006801//superoxide metabolic process	K00384//thioredoxin reductase (NADPH) [EC:1.8.1.9]	gi|460373581|ref|XP_004232594.1|//PREDICTED: thioredoxin reductase NTRB-like [Solanum lycopersicum]
Solyc09g008050.3.1	1713	151.460923747634	390.482262403154	1.36631138292784	0.0144309341105703	Up	0.00442588809683064	NA	NA	NA	K11820//N-hydroxythioamide S-beta-glucosyltransferase [EC:2.4.1.195];K13950//para-aminobenzoate synthetase [EC:2.6.1.85]	gi|460402281|ref|XP_004246642.1|//PREDICTED: UDP-glycosyltransferase 86A1-like [Solanum lycopersicum]
Solyc06g072016.1.1	2242	238.480549444469	77.4098718769189	-1.62328213801531	0.040938980621371	Down	0.0147608006392769	NA	NA	NA	K03231//elongation factor 1-alpha;K07767//katanin p60 ATPase-containing subunit A1 [EC:3.6.4.3]	gi|970033567|ref|XP_015078083.1|//PREDICTED: uncharacterized protein LOC107021876 [Solanum pennellii];gi|723710865|ref|XP_010322970.1|//PREDICTED: uncharacterized protein LOC101252297 [Solanum lycopersicum]
Solyc03g117030.2.1	1298	1120.16990490277	2279.48560195699	1.02499072297103	0.00884240661382833	Up	0.00254052744071078	GO:0043231//intracellular membrane-bounded organelle;GO:0005634//nucleus;GO:0030014//CCR4-NOT complex	GO:0005488//binding;GO:0000175//3'-5'-exoribonuclease activity;GO:0003676//nucleic acid binding	GO:0090503//RNA phosphodiester bond hydrolysis, exonucleolytic;GO:0000288//nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay	K12581//CCR4-NOT transcription complex subunit 7/8	gi|697103456|ref|XP_009605547.1|//PREDICTED: probable CCR4-associated factor 1 homolog 6 [Nicotiana tomentosiformis];gi|460380381|ref|XP_004235935.1|//PREDICTED: probable CCR4-associated factor 1 homolog 7 [Solanum lycopersicum]
Solyc02g083130.3.1	1482	225.44533576931	502.618099253808	1.15668496111686	0.0128286424704073	Up	0.00386896325585454	NA	NA	NA	K19476//vacuolar protein sorting-associated protein IST1	gi|460373470|ref|XP_004232542.1|//PREDICTED: uncharacterized protein LOC101250180 [Solanum lycopersicum]
Solyc03g044600.2.1	1206	256.121144259292	20.6994566396002	-3.62916155793204	0.000249954644474977	Down	4.80287830724804e-05	NA	NA	NA	K20815	gi|970062194|ref|XP_015057984.1|//PREDICTED: uncharacterized protein LOC107004266 [Solanum pennellii]
Solyc12g096780.2.1	1422	3159.12894160456	601.5624640913	-2.39274036810991	0.0227365075933577	Down	0.00747572437308068	NA	NA	NA	K07512//mitochondrial trans-2-enoyl-CoA reductase [EC:1.3.1.38]	gi|460415368|ref|XP_004253031.1|//PREDICTED: probable trans-2-enoyl-CoA reductase, mitochondrial [Solanum lycopersicum]
Solyc06g073290.1.1	792	3612.45251362282	152.700143076915	-4.56420530421271	6.45509105618576e-17	Down	1.67224104817694e-18	NA	NA	NA	NA	gi|460391603|ref|XP_004241410.1|//PREDICTED: tetrapyrrole-binding protein, chloroplastic [Solanum lycopersicum]
Solyc07g006095.1.1	1038	6.74739349391827	39.5415923257483	2.5509687646798	0.000107053227394218	Up	1.88225016258584e-05	NA	NA	NA	NA	gi|460394076|ref|XP_004242631.1|//PREDICTED: putative glutamine amidotransferase YLR126C [Solanum lycopersicum]
Solyc01g087620.3.1	824	3474.75388982321	17625.4615278296	2.34267833215975	7.42178526526972e-07	Up	8.43208643526991e-08	NA	GO:0048037//cofactor binding;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K13113//ubiquitin-like protein 5	gi|629085023|gb|KCW51380.1|//hypothetical protein EUGRSUZ_J00924, partial [Eucalyptus grandis];gi|596028272|ref|XP_007219354.1|//hypothetical protein PRUPE_ppa019466mg [Prunus persica]
Solyc04g009920.3.1	2184	345.114761459379	1443.45146879462	2.06437451457695	2.03165604753806e-05	Up	3.08519708426645e-06	NA	GO:0016740//transferase activity	NA	K20890;K00750//glycogenin glucosyltransferase [EC:2.4.1.186]	gi|723689568|ref|XP_010319283.1|//PREDICTED: inositol phosphorylceramide glucuronosyltransferase 1-like isoform X2 [Solanum lycopersicum];gi|460382129|ref|XP_004236792.1|//PREDICTED: inositol phosphorylceramide glucuronosyltransferase 1-like isoform X1 [Solanum lycopersicum]
Solyc02g087330.3.1	567	1374.83329728851	6902.24937448667	2.32780990040815	6.7764886562141e-10	Up	4.67796965532597e-11	NA	NA	NA	NA	gi|460372897|ref|XP_004232259.1|//PREDICTED: uncharacterized protein LOC101265497 [Solanum lycopersicum]
Solyc08g068610.3.1	1720	212.452976275342	3259.41728615708	3.93939860483836	4.5360233353521e-06	Up	6.00733968633741e-07	NA	GO:0016831//carboxy-lyase activity;GO:0048037//cofactor binding;GO:0016830//carbon-carbon lyase activity;GO:0030170//pyridoxal phosphate binding	GO:0019752//carboxylic acid metabolic process;GO:0043436//oxoacid metabolic process	K01590//histidine decarboxylase [EC:4.1.1.22]	gi|350538737|ref|NP_001233845.1|//aromatic amino acid decarboxylase 1A [Solanum lycopersicum];gi|922959915|ref|NP_001233852.2|//aromatic amino acid decarboxylase 1B [Solanum lycopersicum]
Solyc02g079520.2.1	659	170.069037096112	52.4530364523604	-1.69702231023849	0.0158473285494041	Down	0.00492408419516299	NA	GO:0046872//metal ion binding	NA	K16465//centrin-1	gi|460373937|ref|XP_004232768.1|//PREDICTED: calcium-binding protein KIC-like [Solanum lycopersicum]
Solyc08g076493.1.1	492	50.6527265509388	200.681634686253	1.98619676090672	0.0032980940968933	Up	0.000836325262455834	NA	GO:0046872//metal ion binding	NA	K13448//calcium-binding protein CML	gi|460400934|ref|XP_004245986.1|//PREDICTED: probable calcium-binding protein CML18 [Solanum lycopersicum]
Solyc03g122350.3.1	2118	503.276617182616	3133.15630630006	2.63819326918361	2.30348304793459e-05	Up	3.53919678082092e-06	NA	NA	NA	K07410//cytochrome P450, family 1, subfamily B, polypeptide 1 [EC:1.14.14.1];K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30];K05280//flavonoid 3'-monooxygenase [EC:1.14.13.21]	gi|460379598|ref|XP_004235548.1|//PREDICTED: cytochrome P450 71A1-like [Solanum lycopersicum]
Solyc02g091655.1.1	4767	512.547942738846	1150.10344237739	1.16600476266483	0.00623908532408468	Up	0.00171884149509132	NA	NA	NA	K11721//bromodomain-containing protein 3	gi|460372315|ref|XP_004231976.1|//PREDICTED: uncharacterized protein LOC101252832 [Solanum lycopersicum];gi|723669810|ref|XP_010316055.1|//PREDICTED: transcription factor GTE7 isoform X1 [Solanum lycopersicum]
Solyc04g007660.1.1	1110	199.304478098385	818.913009888011	2.03873608190558	0.000996474166390898	Up	0.000221298385394251	NA	NA	NA	NA	gi|460382554|ref|XP_004237004.1|//PREDICTED: uncharacterized protein LOC101260926 [Solanum lycopersicum]
Solyc12g040790.2.1	2018	2040.07686288426	387.573275055724	-2.39608250997487	3.69756909430306e-07	Down	3.99003374385245e-08	NA	GO:0008170//N-methyltransferase activity	GO:0006730//one-carbon metabolic process	K05929//phosphoethanolamine N-methyltransferase [EC:2.1.1.103]	gi|747043528|ref|XP_011084235.1|//PREDICTED: phosphoethanolamine N-methyltransferase-like isoform X2 [Sesamum indicum];gi|747043526|ref|XP_011084227.1|//PREDICTED: phosphoethanolamine N-methyltransferase-like isoform X1 [Sesamum indicum];gi|460413814|ref|XP_004252273.1|//PREDICTED: phosphomethylethanolamine N-methyltransferase isoform X1 [Solanum lycopersicum]
Solyc05g011930.3.1	4658	244.707135737101	608.345433692747	1.3138345830509	0.000365571829086655	Up	7.28064068439688e-05	NA	NA	NA	K15639//PHYB activation tagged suppressor 1 [EC:1.14.-.-]	gi|460386678|ref|XP_004239023.1|//PREDICTED: uncharacterized protein LOC101260227 [Solanum lycopersicum]
Solyc02g090970.1.1	1083	279.728109809812	1867.12794648455	2.73872365053495	4.27625583267544e-11	Up	2.44193526750364e-12	NA	NA	NA	K20716	gi|460372409|ref|XP_004232023.1|//PREDICTED: mitogen-activated protein kinase kinase kinase NPK1-like [Solanum lycopersicum]
Solyc03g112300.3.1	2399	98.1926892913556	794.597641557254	3.01653699023164	3.33714173322194e-07	Up	3.5662685810151e-08	NA	NA	NA	K02923//large subunit ribosomal protein L38e;K03255//protein TIF31	gi|460381041|ref|XP_004236261.1|//PREDICTED: uncharacterized protein LOC101266924 isoform X2 [Solanum lycopersicum]
Solyc08g065870.3.1	3189	547.979324021326	1638.05420646789	1.57978973486477	1.83149007705327e-09	Up	1.35102089700627e-10	NA	NA	NA	K12125//protein EARLY FLOWERING 3	gi|460399191|ref|XP_004245125.1|//PREDICTED: protein EARLY FLOWERING 3-like [Solanum lycopersicum]
Solyc05g014320.3.1	2043	223.642351480116	690.22466083316	1.62587260099062	6.18388718153559e-05	Up	1.03541155581698e-05	NA	NA	NA	K14493//gibberellin receptor GID1 [EC:3.-.-.-]	gi|460386990|ref|XP_004239175.1|//PREDICTED: probable carboxylesterase 11 [Solanum lycopersicum]
BGI_novel_G000512	926	142.50442633208	349.306841089614	1.29348816629611	0.000444516012566477	Up	9.0450757141807e-05	NA	NA	NA	K03350//anaphase-promoting complex subunit 3	gi|460413989|ref|XP_004252357.1|//PREDICTED: uncharacterized protein LOC101247701 [Solanum lycopersicum]
Solyc08g077500.3.1	13677	651.730500990077	1334.60304922982	1.03406328537931	0.00313504294857632	Up	0.000791356450266843	NA	NA	NA	K19525//vacuolar protein sorting-associated protein 13A/C	gi|723725371|ref|XP_010325533.1|//PREDICTED: uncharacterized protein LOC101254928 isoform X2 [Solanum lycopersicum]
Solyc08g014150.3.1	2265	214.529213694413	3566.86060338423	4.05540880847188	4.90863887958681e-25	Up	5.39752672386354e-27	NA	NA	NA	K12486//stromal membrane-associated protein;K11968//ariadne-1 [EC:2.3.2.27]	gi|460398419|ref|XP_004244757.1|//PREDICTED: C2 and GRAM domain-containing protein At1g03370-like isoform X1 [Solanum lycopersicum]
Solyc10g007400.3.1	2181	196.906032508717	92.6086034924846	-1.08828917744105	0.0274635250556843	Down	0.00930195481905244	NA	NA	NA	K03504//DNA polymerase delta subunit 3	gi|460405543|ref|XP_004248235.1|//PREDICTED: muscle M-line assembly protein unc-89 [Solanum lycopersicum]
Solyc02g086810.1.1	822	210.834669770683	1227.74959008501	2.5418323116806	1.49153439083815e-13	Up	5.89875498985864e-15	NA	NA	NA	NA	gi|460372971|ref|XP_004232296.1|//PREDICTED: uncharacterized protein LOC101250946 [Solanum lycopersicum]
Solyc07g022910.3.1	3269	1222.87229702463	5184.20090951045	2.08384787683406	0.000271451841328608	Up	5.25338437519805e-05	NA	NA	NA	K17618//ubiquitin-like domain-containing CTD phosphatase 1 [EC:3.1.3.16];K20283//golgin subfamily A member 4;K20478//golgin subfamily B member 1	gi|460394741|ref|XP_004242953.1|//PREDICTED: protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1 [Solanum lycopersicum]
Solyc04g079420.3.1	2730	2137.58572935529	8970.45474363959	2.06919884079997	0.0205192526546282	Up	0.00663273292906425	NA	GO:0000166//nucleotide binding	NA	K19613//leucine-rich repeat protein SHOC2;K13459//disease resistance protein RPS2;K13457//disease resistance protein RPM1	gi|460384990|ref|XP_004238189.1|//PREDICTED: probable disease resistance protein At4g33300 [Solanum lycopersicum]
Solyc12g010545.1.1	411	196.324480142806	2.64942728542229	-6.21141573410849	2.37868860030477e-11	Down	1.30602665433462e-12	NA	NA	NA	NA	gi|970067131|ref|XP_015060643.1|//PREDICTED: cell wall protein IFF6-like [Solanum pennellii]
Solyc03g123800.2.1	2483	2377.50953724854	8693.9217008052	1.87055597408577	7.29110679885063e-06	Up	1.01017757459847e-06	GO:0005737//cytoplasm	GO:0005524//ATP binding;GO:0005515//protein binding;GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity;GO:0004708//MAP kinase kinase activity;GO:0004702//receptor signaling protein serine/threonine kinase activity	GO:0000165//MAPK cascade;GO:0006464//cellular protein modification process	K13413//mitogen-activated protein kinase kinase 4/5, plant [EC:2.7.12.2]	gi|350538215|ref|NP_001234588.1|//mitogen-activated protein kinase kinase 2 [Solanum lycopersicum]
Solyc06g019200.3.1	1602	2651.59226947587	1223.62131636105	-1.11570180690021	9.13250528441421e-06	Down	1.28981148511426e-06	GO:0009535//chloroplast thylakoid membrane;GO:0016021//integral component of membrane	NA	NA	K00275//pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]	gi|723704936|ref|XP_010321956.1|//PREDICTED: probable zinc metalloprotease EGY2, chloroplastic isoform X4 [Solanum lycopersicum];gi|723704928|ref|XP_010321954.1|//PREDICTED: probable zinc metalloprotease EGY2, chloroplastic isoform X1 [Solanum lycopersicum];gi|723704933|ref|XP_010321955.1|//PREDICTED: probable zinc metalloprotease EGY2, chloroplastic isoform X3 [Solanum lycopersicum];gi|460390117|ref|XP_004240688.1|//PREDICTED: probable zinc metalloprotease EGY2, chloroplastic isoform X2 [Solanum lycopersicum]
Solyc10g085810.2.1	1084	749.513824934691	2605.55691553625	1.79756477487209	7.68675167577247e-08	Up	7.36355740522411e-09	NA	NA	NA	K12185//ESCRT-I complex subunit VPS37	gi|723739768|ref|XP_010312332.1|//PREDICTED: vacuolar protein-sorting-associated protein 37 homolog 1 [Solanum lycopersicum]
Solyc10g009110.1.1	669	1112.11178213602	7621.2928970301	2.77673395569113	1.23879044559314e-06	Up	1.48315003401117e-07	GO:0043231//intracellular membrane-bounded organelle	GO:0001071//nucleic acid binding transcription factor activity;GO:0003676//nucleic acid binding	GO:0006351//transcription, DNA-templated	K09286//EREBP-like factor	gi|902967444|ref|NP_001233796.2|//ethylene response factor 3 [Solanum lycopersicum]
Solyc04g009515.1.1	806	84.8381164082572	8.95231171616239	-3.2443804138327	0.0342610892340493	Down	0.01199674490326	NA	NA	NA	NA	NA
Solyc01g068390.3.1	3245	1112.94123037282	2596.06924888032	1.22195145484922	0.000398698332482284	Up	8.01694226161776e-05	NA	NA	NA	NA	gi|460366586|ref|XP_004229162.1|//PREDICTED: zinc finger protein 598-like [Solanum lycopersicum]
Solyc11g008390.2.1	2670	825.960882548588	3512.66970033859	2.08842256251984	1.0626159048254e-08	Up	8.81684435716911e-10	GO:0043234//protein complex	GO:0019787//ubiquitin-like protein transferase activity	GO:0032446//protein modification by small protein conjugation	K08332//vacuolar protein 8	gi|981220781|ref|NP_001306052.1|//U-box domain-containing protein 14 [Solanum lycopersicum]
Solyc05g052490.3.1	5660	323.156159789896	1581.80776367444	2.29127088374614	1.92654966172985e-10	Up	1.21791718588558e-11	NA	NA	NA	K01510//apyrase [EC:3.6.1.5];K14643//ectonucleoside triphosphate diphosphohydrolase 7 [EC:3.6.1.-]	gi|460388588|ref|XP_004239949.1|//PREDICTED: probable apyrase 7 [Solanum lycopersicum]
BGI_novel_G000078	2684	791.425530671017	317.219698534807	-1.31897124458827	0.0062329242885875	Down	0.00171691182692193	NA	NA	NA	K07305//peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12];K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6];K20093//DNA excision repair protein ERCC-6-like [EC:3.6.4.12];K12447//UDP-sugar pyrophosphorylase [EC:2.7.7.64];K05658//ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:3.6.3.44]	gi|147780308|emb|CAN61435.1|//hypothetical protein VITISV_033767 [Vitis vinifera]
Solyc03g115640.3.1	1036	593.983038285932	23.9735164462356	-4.63090828939169	1.9091233612985e-15	Down	5.82813490719946e-17	NA	NA	NA	NA	gi|460380592|ref|XP_004236039.1|//PREDICTED: uncharacterized protein At5g01610-like [Solanum lycopersicum]
Solyc04g056503.1.1	682	0.414463196487228	31.4835799487228	6.24721178760824	2.02718665952969e-06	Up	2.5200042901191e-07	GO:0032991//macromolecular complex;GO:0005874//microtubule;GO:0015630//microtubule cytoskeleton;GO:0005737//cytoplasm	GO:0032561//guanyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity;GO:0005525//GTP binding;GO:0005200//structural constituent of cytoskeleton;GO:0003924//GTPase activity	GO:0007017//microtubule-based process;GO:0009207//purine ribonucleoside triphosphate catabolic process;GO:0043623//cellular protein complex assembly	K07375//tubulin beta	gi|728845993|gb|KHG25436.1|//Tubulin beta-8 chain -like protein [Gossypium arboreum];gi|728831583|gb|KHG11026.1|//Tubulin beta-8 chain -like protein [Gossypium arboreum]
Solyc04g011490.3.1	1307	1.28719107535053	19.6665074810559	3.93344264277157	0.00284666707415613	Up	0.000709226283124333	GO:0016020//membrane	NA	GO:0006970//response to osmotic stress;GO:0006952//defense response;GO:0002239//response to oomycetes;GO:0009725//response to hormone	NA	gi|460382045|ref|XP_004236750.1|//PREDICTED: CASP-like protein PIMP1 [Solanum lycopersicum];gi|460382043|ref|XP_004236749.1|//PREDICTED: CASP-like protein PIMP1 [Solanum lycopersicum]
Solyc08g081060.3.1	2971	486.488178177419	217.367187530031	-1.16227057141124	0.000161865497079976	Down	2.98595625856866e-05	NA	NA	NA	NA	gi|460400165|ref|XP_004245606.1|//PREDICTED: uncharacterized protein LOC101258476 [Solanum lycopersicum]
Solyc01g111130.3.1	3553	759.995081819297	248.468307694057	-1.61292823566384	5.84956415743178e-05	Down	9.73328403115233e-06	NA	NA	NA	NA	gi|460370176|ref|XP_004230930.1|//PREDICTED: transcription factor bHLH121 [Solanum lycopersicum]
Solyc06g076400.3.1	4355	652.278131315009	256.821089477167	-1.34472358296106	0.000242756824715045	Down	4.64195061423954e-05	NA	NA	NA	K14497//protein phosphatase 2C [EC:3.1.3.16]	gi|460391200|ref|XP_004241211.1|//PREDICTED: probable protein phosphatase 2C 24 [Solanum lycopersicum]
Solyc07g065040.3.1	6964	778.565015406392	378.457023172364	-1.0406880391277	0.0252678966948493	Down	0.00845738070801818	NA	NA	NA	K03131//transcription initiation factor TFIID subunit 6	gi|460397576|ref|XP_004244343.1|//PREDICTED: transcription initiation factor TFIID subunit 6-like [Solanum lycopersicum]
Solyc06g074140.1.1	1263	13.8561854936955	1518.97351750149	6.77642275844733	1.05911141828086e-47	Up	1.81598051442223e-50	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K10260//F-box and WD-40 domain protein 7;K08332//vacuolar protein 8	gi|460391451|ref|XP_004241334.1|//PREDICTED: E3 ubiquitin-protein ligase PUB24-like [Solanum lycopersicum]
Solyc01g098410.3.1	2374	179.588594582029	571.289076227543	1.66952521456059	0.000204853180612556	Up	3.86371363463372e-05	GO:0005622//intracellular;GO:0016021//integral component of membrane;GO:0005886//plasma membrane	GO:0019199//transmembrane receptor protein kinase activity;GO:0005524//ATP binding;GO:0008061//chitin binding;GO:0004674//protein serine/threonine kinase activity;GO:0016301//kinase activity;GO:2001080//chitosan binding;GO:0042803//protein homodimerization activity	GO:0009817//defense response to fungus, incompatible interaction;GO:0032491//detection of molecule of fungal origin;GO:0042742//defense response to bacterium;GO:0035556//intracellular signal transduction;GO:0046777//protein autophosphorylation;GO:0010200//response to chitin;GO:0032499//detection of peptidoglycan;GO:0002752//cell surface pattern recognition receptor signaling pathway	K13429//chitin elicitor receptor kinase 1	gi|350539611|ref|NP_001234730.1|//Lyk13 precursor [Solanum lycopersicum];gi|723659559|ref|XP_010323689.1|//PREDICTED: lyk13 isoform X1 [Solanum lycopersicum]
Solyc07g065240.2.1	3532	386.340008974342	779.346793648096	1.01239435211497	0.0140750994167849	Up	0.00429891772108004	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723719085|ref|XP_010324431.1|//PREDICTED: probably inactive receptor-like protein kinase At5g41680 [Solanum lycopersicum]
Solyc06g007740.1.1	2559	171.297154700879	53.130827311161	-1.68888010540369	1.99689840972898e-06	Down	2.4808641716217e-07	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial;K17710//pentatricopeptide repeat domain-containing protein 1	gi|460389622|ref|XP_004240450.1|//PREDICTED: putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial isoform X1 [Solanum lycopersicum]
Solyc04g080770.3.1	2379	1035.68100267785	321.730084522679	-1.68665695904872	2.20784490752843e-06	Down	2.76398475567565e-07	NA	NA	NA	K03665//GTPase	gi|460385143|ref|XP_004238264.1|//PREDICTED: putative GTP-binding protein 6 [Solanum lycopersicum]
Solyc05g018180.3.1	3242	389.711903132561	2000.27033149598	2.35971508765011	5.28087352914188e-10	Up	3.59039560054972e-11	NA	NA	NA	NA	gi|460387185|ref|XP_004239267.1|//PREDICTED: uncharacterized protein LOC101265640 [Solanum lycopersicum]
Solyc03g033590.1.1	300	31.1510043865359	5.5168728193229	-2.49735605264305	0.00409520248404921	Down	0.00106922789395173	NA	NA	NA	K14488//SAUR family protein	gi|460377518|ref|XP_004234539.1|//PREDICTED: auxin-induced protein 15A [Solanum lycopersicum]
Solyc02g062370.3.1	6681	588.316369481428	2277.26178839647	1.95263606579227	7.72563000911933e-05	Up	1.31457808974317e-05	NA	NA	NA	K10398//kinesin family member 11;K15223//upstream activation factor subunit UAF30;K01062//platelet-activating factor acetylhydrolase [EC:3.1.1.47]	gi|723677789|ref|XP_010317232.1|//PREDICTED: zinc finger CCCH domain-containing protein 44 isoform X1 [Solanum lycopersicum];gi|723677792|ref|XP_010317233.1|//PREDICTED: zinc finger CCCH domain-containing protein 44 isoform X2 [Solanum lycopersicum]
Solyc03g098345.1.1	2644	184.76320062846	79.9088844346579	-1.20924962413622	0.000832178194528598	Down	0.000181430231839786	NA	NA	NA	K14315//nucleoporin NDC1	gi|460379462|ref|XP_004235481.1|//PREDICTED: uncharacterized protein LOC101265714 [Solanum lycopersicum]
BGI_novel_G000288	1523	5.28485071466771	28.7364794948563	2.44294870374422	0.0267408220739903	Up	0.00902956266468907	NA	NA	NA	K09571//FK506-binding protein 4/5 [EC:5.2.1.8];K00225//L-galactono-1,4-lactone dehydrogenase [EC:1.3.2.3];K08518//syntaxin-binding protein 5;K03834//tyrosine-specific transport protein;K11294//nucleolin	gi|723714367|ref|XP_010323572.1|//PREDICTED: uncharacterized protein LOC104648348 [Solanum lycopersicum]
Solyc03g096860.3.1	1164	319.832613421735	151.465807759115	-1.07832490519388	0.0040247957029794	Down	0.00104805512080714	NA	NA	NA	NA	gi|460379182|ref|XP_004235343.1|//PREDICTED: uncharacterized protein LOC101266202 [Solanum lycopersicum]
Solyc02g092860.3.1	2979	95.9943948254737	2165.83705487237	4.49583072832286	2.1005295570053e-08	Up	1.81412217965606e-09	NA	NA	NA	K00517;K13260//isoflavone 2'-hydroxylase [EC:1.14.13.89]	gi|460372134|ref|XP_004231887.1|//PREDICTED: cytochrome P450 81D1-like [Solanum lycopersicum]
Solyc01g110960.3.1	2579	2102.64503894101	875.826754410065	-1.263487893523	0.00890533516164633	Down	0.00256192697098503	NA	NA	NA	K10352//myosin heavy chain;K14488//SAUR family protein;K20478//golgin subfamily B member 1	gi|460370114|ref|XP_004230899.1|//PREDICTED: cingulin-like protein 1 [Solanum lycopersicum]
Solyc01g066700.3.1	1147	61.0018467355146	407.992870172155	2.74161911699665	8.40417547384922e-06	Up	1.18256159287986e-06	GO:0043231//intracellular membrane-bounded organelle;GO:0031090//organelle membrane	GO:0016831//carboxy-lyase activity	GO:0006139//nucleobase-containing compound metabolic process;GO:0019321//pentose metabolic process	K08678//UDP-glucuronate decarboxylase [EC:4.1.1.35]	gi|969998233|ref|XP_015071786.1|//PREDICTED: UDP-glucuronic acid decarboxylase 4-like [Solanum pennellii];gi|460366764|ref|XP_004229249.1|//PREDICTED: UDP-glucuronic acid decarboxylase 4-like [Solanum lycopersicum];gi|565351801|ref|XP_006342840.1|//PREDICTED: UDP-glucuronic acid decarboxylase 4-like [Solanum tuberosum]
Solyc02g071560.3.1	3033	30.4206041813088	1559.57807444369	5.67996316082281	1.06275829216593e-17	Up	2.50755180759293e-19	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13199//plasminogen activator inhibitor 1 RNA-binding protein;K12663//Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase [EC:5.3.3.-];K01183//chitinase [EC:3.2.1.14]	gi|460374367|ref|XP_004232982.1|//PREDICTED: subtilisin-like protease [Solanum lycopersicum]
Solyc10g085590.1.1	1212	984.847246114561	3882.43516876928	1.97898995476726	0.000718643438792729	Up	0.000154025636389526	NA	NA	NA	K12183//ESCRT-I complex subunit TSG101	gi|723739687|ref|XP_010312317.1|//PREDICTED: protein ELC-like [Solanum lycopersicum]
Solyc02g088070.3.1	2994	57.5982801081631	202.875869333177	1.8164996384371	8.76530773778179e-05	Up	1.51239784994006e-05	NA	NA	NA	K16222//Dof zinc finger protein DOF5.5	gi|460372810|ref|XP_004232217.1|//PREDICTED: cyclic dof factor 3-like [Solanum lycopersicum]
Solyc01g086730.3.1	879	20.8881871158636	728.603269659914	5.12437427773324	3.07228543838571e-10	Up	2.00864345420029e-11	NA	NA	NA	NA	gi|970000231|ref|XP_015087024.1|//PREDICTED: probable magnesium transporter NIPA8 [Solanum pennellii]
Solyc11g069640.2.1	1414	84.0589364993284	226.596945436596	1.43065530456413	0.0411016913234127	Up	0.0148332553821858	NA	GO:0016836//hydro-lyase activity;GO:0046914//transition metal ion binding	GO:0044237//cellular metabolic process	K01674//carbonic anhydrase [EC:4.2.1.1]	gi|460411510|ref|XP_004251153.1|//PREDICTED: alpha carbonic anhydrase 7 [Solanum lycopersicum]
Solyc11g012840.2.1	1311	154.697755195601	501.265685457973	1.69612321453313	0.00934402613414476	Up	0.00270937748984315	NA	NA	NA	K10523//speckle-type POZ protein	gi|970949398|ref|NP_001305157.1|//BTB/POZ domain-containing protein [Solanum lycopersicum]
Solyc02g087660.3.1	3684	163.32458884916	51.0632331371417	-1.67738521600254	0.00137874540227018	Down	0.000316086099299552	GO:0031224//intrinsic component of membrane	NA	GO:0006810//transport	K13947//auxin efflux carrier family	gi|723668622|ref|XP_010315851.1|//PREDICTED: auxin efflux facilitator SlPIN8 isoform X1 [Solanum lycopersicum]
Solyc03g096640.3.1	4015	14.5810292663808	0.727721824842148	-4.32456167333785	0.00823448875204959	Down	0.00234591462397178	NA	NA	NA	K08081//tropinone reductase I [EC:1.1.1.206]	gi|460379021|ref|XP_004235263.1|//PREDICTED: tropinone reductase homolog [Solanum lycopersicum]
Solyc07g053630.3.1	2055	2591.17540661271	185.170561636949	-3.80668001769593	9.8473185573721e-13	Down	4.38262202083729e-14	NA	NA	NA	K14491//two-component response regulator ARR-B family	gi|525314042|ref|NP_001266193.1|//golden1-like protein [Solanum lycopersicum]
Solyc11g011790.2.1	3589	325.815394751411	1248.66227907131	1.93825665166175	0.000719185275277173	Up	0.000154195381817291	NA	NA	NA	K07562//nonsense-mediated mRNA decay protein 3;K20222//importin-5	gi|723742034|ref|XP_010312727.1|//PREDICTED: importin-5-like [Solanum lycopersicum];gi|698588044|ref|XP_009779349.1|//PREDICTED: 60S ribosomal export protein NMD3-like [Nicotiana sylvestris]
Solyc12g042530.2.1	2009	121.688417638116	42.0773821125207	-1.53207500439758	0.00289864797722569	Down	0.000723762750444141	GO:0044425//membrane part	NA	NA	K05287//phosphatidylinositol glycan, class F [EC:2.7.-.-]	gi|460413867|ref|XP_004252298.1|//PREDICTED: phosphatidylinositol-glycan biosynthesis class F protein-like isoform X1 [Solanum lycopersicum]
Solyc12g044920.2.1	5215	87.3846209340724	38.765695033115	-1.17259886675272	0.0124238726929372	Down	0.00372705345001392	NA	NA	NA	K01530//phospholipid-translocating ATPase [EC:3.6.3.1]	gi|460414031|ref|XP_004252378.1|//PREDICTED: putative phospholipid-transporting ATPase 4 isoform X1 [Solanum lycopersicum];gi|697181108|ref|XP_009599537.1|//PREDICTED: putative phospholipid-transporting ATPase 4 [Nicotiana tomentosiformis]
Solyc11g072120.2.1	1315	169.059954999195	14.0355096593709	-3.59038161375224	4.06994543957217e-14	Down	1.50188086520667e-15	NA	NA	NA	K06892//feruloyl-CoA ortho-hydroxylase [EC:1.14.11.-]	gi|565346630|ref|XP_006340352.1|//PREDICTED: feruloyl CoA ortho-hydroxylase 2-like [Solanum tuberosum]
Solyc02g080090.1.1	2637	4.53606228834395	81.2837656872863	4.16345488401227	8.73878902054107e-11	Up	5.22477172690766e-12	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|971551676|ref|XP_015164532.1|//PREDICTED: cysteine-rich receptor-like protein kinase 10 [Solanum tuberosum];gi|723674041|ref|XP_010316622.1|//PREDICTED: putative receptor-like protein kinase At4g00960 isoform X2 [Solanum lycopersicum]
Solyc11g042820.2.1	1954	50.079877486999	6.84191903772819	-2.87175809541492	0.000726690763074796	Down	0.000155912927995323	NA	NA	NA	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460410618|ref|XP_004250721.1|//PREDICTED: protein NRT1/ PTR FAMILY 4.4-like isoform X1 [Solanum lycopersicum]
Solyc07g043250.1.1	483	296.898199320899	2462.27845094516	3.05195367211025	3.05649897259769e-05	Up	4.80326512169071e-06	NA	NA	NA	NA	gi|723716496|ref|XP_010323951.1|//PREDICTED: uncharacterized protein LOC104648424 [Solanum lycopersicum]
Solyc03g005520.1.1	636	0.512430105740764	41.368374252529	6.33502921374811	2.33366000005314e-06	Up	2.93403726710126e-07	GO:0043231//intracellular membrane-bounded organelle	GO:0001071//nucleic acid binding transcription factor activity;GO:0003676//nucleic acid binding	GO:0000160//phosphorelay signal transduction system;GO:0006950//response to stress;GO:0006351//transcription, DNA-templated	K14516//ethylene-responsive transcription factor 1	gi|460376904|ref|XP_004234236.1|//PREDICTED: ethylene-responsive transcription factor 1B-like [Solanum lycopersicum]
Solyc06g069220.1.1	1488	17.520161631919	95.1289044164522	2.44086767842689	4.54120414960479e-06	Up	6.01589367366014e-07	NA	NA	NA	K00924;K02882//large subunit ribosomal protein L18Ae;K01381//saccharopepsin [EC:3.4.23.25]	gi|460392033|ref|XP_004241622.1|//PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1-like [Solanum lycopersicum]
Solyc01g067630.3.1	1989	1144.11774792536	486.95458677122	-1.23237639762159	7.60948104281512e-06	Down	1.05967724675553e-06	NA	NA	NA	NA	gi|460366662|ref|XP_004229199.1|//PREDICTED: uncharacterized protein LOC101266557 [Solanum lycopersicum]
Solyc08g076150.3.1	1818	1057.10690610397	28.3577954557862	-5.22023209347089	9.34319554071344e-11	Down	5.6139970223759e-12	NA	NA	NA	K17285//selenium-binding protein 1;K10683//BRCA1-associated RING domain protein 1;K11000//callose synthase [EC:2.4.1.-]	gi|460400850|ref|XP_004245945.1|//PREDICTED: pentatricopeptide repeat-containing protein At1g31920 [Solanum lycopersicum]
Solyc07g054820.3.1	2448	11557.4840036825	2701.71488203647	-2.09688002878849	3.59335136354304e-10	Down	2.37744098340872e-11	GO:0016020//membrane;GO:0044435//plastid part;GO:0016021//integral component of membrane;GO:0009707//chloroplast outer membrane;GO:0009570//chloroplast stroma	NA	GO:0010207//photosystem II assembly	K00901//diacylglycerol kinase (ATP) [EC:2.7.1.107]	gi|460395468|ref|XP_004243305.1|//PREDICTED: protein THYLAKOID FORMATION1, chloroplastic [Solanum lycopersicum]
Solyc05g007800.3.1	955	506.757723232265	219.898412522481	-1.20445898201601	0.0259485678248327	Down	0.00871755038784914	NA	NA	NA	K03251//translation initiation factor 3 subunit D	gi|723697499|ref|XP_010320691.1|//PREDICTED: uncharacterized protein LOC101245646 [Solanum lycopersicum]
Solyc12g033030.1.1	249	383.364952509294	140.581291803604	-1.44731383380789	0.030868478078078	Down	0.0106388670721834	GO:0030529//intracellular ribonucleoprotein complex;GO:0009536//plastid	GO:0003723//RNA binding;GO:0005198//structural molecule activity	GO:0010467//gene expression	K02892//large subunit ribosomal protein L23	gi|404474567|ref|YP_006666072.1|//ribosomal protein L23 (chloroplast) [Capsicum annuum]
Solyc03g080020.3.1	1820	278.198856752499	137.756449262361	-1.01399662901301	0.0364201781589148	Down	0.0128785970234488	NA	NA	NA	NA	gi|460378565|ref|XP_004235041.1|//PREDICTED: UNC93-like protein 1 [Solanum lycopersicum]
Solyc01g096390.3.1	6854	2064.01692771751	803.349465606486	-1.3613551856855	0.00513314373682733	Down	0.00137425452677658	NA	NA	NA	K16251//DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6]	gi|723666760|ref|XP_010315461.1|//PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase V subunit 1 [Solanum lycopersicum]
Solyc02g091250.1.1	393	34.9751549941949	1285.19105378275	5.19950858234752	3.49555220029314e-25	Up	3.77855277353888e-27	NA	NA	NA	NA	gi|723678020|ref|XP_010317275.1|//PREDICTED: uncharacterized protein LOC104645999 [Solanum lycopersicum]
Solyc06g072780.2.1	2677	115.167401652727	40.194926316289	-1.51864710606013	0.0177081854174602	Down	0.0055890117314042	NA	NA	NA	NA	gi|460393067|ref|XP_004242133.1|//PREDICTED: FAS1 domain-containing protein SELMODRAFT_448915-like [Solanum lycopersicum]
Solyc07g006680.1.1	1359	422.307589716889	12.2738235125145	-5.10463752642224	1.06920935705469e-17	Down	2.53074378160776e-19	NA	NA	NA	K13065//shikimate O-hydroxycinnamoyltransferase [EC:2.3.1.133]	gi|460394161|ref|XP_004242673.1|//PREDICTED: vinorine synthase-like [Solanum lycopersicum]
Solyc01g073840.1.1	1380	5.30135155412417	285.277877652882	5.74986385010461	1.91386564227562e-16	Up	5.22196827995286e-18	NA	NA	NA	K17609//nucleoredoxin [EC:1.8.1.8];K16219//protein N-terminal methyltransferase [EC:2.1.1.244];K20393//PRA1 family protein 3	gi|723659526|ref|XP_004229362.2|//PREDICTED: uncharacterized protein LOC101255237 [Solanum lycopersicum]
Solyc05g025655.1.1	1476	14.7257265246318	1.06077653840326	-3.79514613680453	0.00200543477960134	Down	0.000479306985492911	NA	NA	NA	NA	gi|698504897|ref|XP_009797936.1|//PREDICTED: uncharacterized protein LOC104244246 [Nicotiana sylvestris]
Solyc02g086408.1.1	954	2.36057426734021	11.9093158624439	2.3348807609293	0.0344188146908213	Up	0.012059150238049	NA	NA	NA	NA	NA
Solyc10g009380.3.1	1521	286.500532244031	64.2142914959072	-2.15757149556249	0.0185542628629344	Down	0.00589935374313517	NA	NA	NA	NA	gi|460405244|ref|XP_004248086.1|//PREDICTED: uncharacterized protein LOC101265371 [Solanum lycopersicum]
Solyc02g069460.3.1	1078	28685.2125297696	5151.73158399504	-2.47717787391866	7.14093984375869e-06	Down	9.86444127813095e-07	GO:0009522//photosystem I	NA	GO:0044237//cellular metabolic process	K02694//photosystem I subunit III	gi|460374802|ref|XP_004233198.1|//PREDICTED: photosystem I reaction center subunit III, chloroplastic-like [Solanum lycopersicum]
Solyc12g098340.2.1	1617	197.332271702221	35.0163884415715	-2.49452471527152	0.000466520183810514	Down	9.5449876581777e-05	NA	NA	NA	K01051//pectinesterase [EC:3.1.1.11]	gi|460415300|ref|XP_004252997.1|//PREDICTED: probable pectinesterase 29 [Solanum lycopersicum]
Solyc01g105050.3.1	3856	27014.7363366885	716.691239043329	-5.23625107226121	1.13542228157498e-13	Down	4.4057499445339e-15	GO:0031224//intrinsic component of membrane;GO:0009521//photosystem;GO:0009534//chloroplast thylakoid	GO:0046906//tetrapyrrole binding	GO:0006464//cellular protein modification process;GO:0006091//generation of precursor metabolites and energy	K08917//light-harvesting complex II chlorophyll a/b binding protein 6	gi|823630978|ref|NP_001296291.1|//chlorophyll a-b binding protein CP24 10B, chloroplastic [Solanum lycopersicum]
Solyc02g082890.1.1	777	7.69460169326073	67.4816336300881	3.13257634625202	0.000589971817610544	Up	0.00012396269330068	NA	NA	NA	K19040//E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:2.3.2.27];K11982//E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]	gi|723678139|ref|XP_010317305.1|//PREDICTED: RING-H2 finger protein ATL81-like [Solanum lycopersicum]
Solyc03g121100.3.1	911	33.7557491549303	358.199260955358	3.40755721801519	0.000424746310434174	Up	8.60291941109946e-05	NA	NA	NA	K20728	gi|460379777|ref|XP_004235637.1|//PREDICTED: acid phosphatase 1-like [Solanum lycopersicum]
Solyc01g106280.3.1	2543	11695.7728314182	36940.3567592466	1.65921060450402	9.97853613819376e-07	Up	1.17088235287886e-07	NA	NA	NA	K11721//bromodomain-containing protein 3	gi|909618047|ref|NP_001234374.2|//PSTVd RNA-binding protein Virp1d [Solanum lycopersicum]
Solyc02g093310.3.1	1601	154.354691580507	855.178700656615	2.46997658724843	8.2273777451798e-11	Up	4.90060743879429e-12	NA	GO:0042578//phosphoric ester hydrolase activity	NA	NA	gi|460372059|ref|XP_004231851.1|//PREDICTED: PI-PLC X domain-containing protein At5g67130-like [Solanum lycopersicum]
Solyc05g015890.3.1	1813	16.1756113909725	0.756093192587723	-4.41911236729522	0.000567013146263961	Down	0.000118546918793595	NA	NA	NA	K12600//superkiller protein 3	gi|460387132|ref|XP_004239243.1|//PREDICTED: uncharacterized protein LOC101252688 [Solanum lycopersicum]
Solyc11g072660.2.1	2298	361.822241377492	2920.60215944563	3.01291285062801	1.26806168234146e-13	Up	4.95351365399526e-15	NA	GO:0004674//protein serine/threonine kinase activity;GO:0005524//ATP binding;GO:0000166//nucleotide binding;GO:0004672//protein kinase activity	GO:0006468//protein phosphorylation	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K18873//pathogen-induced protein kinase	gi|460411779|ref|XP_004251283.1|//PREDICTED: probable serine/threonine-protein kinase RLCKVII isoform X1 [Solanum lycopersicum]
Solyc11g062130.2.1	1621	30016.8714019149	64874.7937097235	1.11188443037053	2.66031236766397e-07	Up	2.7854545403191e-08	GO:0031224//intrinsic component of membrane;GO:0043231//intracellular membrane-bounded organelle;GO:0016021//integral component of membrane;GO:0005743//mitochondrial inner membrane;GO:0019866//organelle inner membrane	GO:0003735//structural constituent of ribosome;GO:0005215//transporter activity	GO:0006810//transport;GO:0055085//transmembrane transport;GO:0006412//translation	K05863//solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31	gi|697141737|ref|XP_009624983.1|//PREDICTED: ADP,ATP carrier protein, mitochondrial [Nicotiana tomentosiformis];gi|807066340|ref|NP_001234018.2|//ADP/ATP translocator [Solanum lycopersicum]
Solyc07g056340.3.1	6262	665.543049055171	279.303651212355	-1.25269755297083	0.0233524778289146	Down	0.00771046103356662	NA	NA	NA	K20308//trafficking protein particle complex subunit 11;K17579//protein phosphatase 1 regulatory subunit 42	gi|460395260|ref|XP_004243202.1|//PREDICTED: protein MEI2-like 2 [Solanum lycopersicum]
Solyc05g046120.3.1	3566	173.186222047237	33.3334658016269	-2.37728092739442	3.14883627452017e-07	Down	3.34390731553152e-08	NA	NA	NA	K19984//exocyst complex component 5;K02184//formin 2	gi|460388976|ref|XP_004240139.1|//PREDICTED: formin-like protein 3 [Solanum lycopersicum]
Solyc03g083615.1.1	540	975.770408955519	8617.45933770966	3.14264894799678	2.00459586210133e-14	Up	7.04612307276559e-16	NA	GO:0030234//enzyme regulator activity	NA	K01051//pectinesterase [EC:3.1.1.11]	gi|460378353|ref|XP_004234937.1|//PREDICTED: 21 kDa protein-like [Solanum lycopersicum]
Solyc03g119440.3.1	3871	1227.13261079045	4068.48531167845	1.72920061909845	9.62204794332961e-06	Up	1.36397228002395e-06	NA	NA	NA	K19907;K01652//acetolactate synthase I/II/III large subunit [EC:2.2.1.6]	gi|460380014|ref|XP_004235753.1|//PREDICTED: synaptotagmin-5 [Solanum lycopersicum]
Solyc03g025410.3.1	1436	4987.21414800101	897.497593726752	-2.4742541767417	5.40808006081263e-32	Down	3.30596813021198e-34	NA	GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K19329//WW domain-containing oxidoreductase	gi|460377358|ref|XP_004234460.1|//PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like isoform X1 [Solanum lycopersicum];gi|460377272|ref|XP_004234417.1|//PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Solanum lycopersicum];gi|723679760|ref|XP_010317627.1|//PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like isoform X2 [Solanum lycopersicum];gi|698515060|ref|XP_009802402.1|//PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like isoform X1 [Nicotiana sylvestris];gi|460377268|ref|XP_004234415.1|//PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like [Solanum lycopersicum]
Solyc07g064475.1.1	480	119.434089542875	653.889703559333	2.45283262870764	7.44922199452775e-09	Up	6.03368100272431e-10	NA	NA	NA	NA	gi|460397148|ref|XP_004244130.1|//PREDICTED: UPF0136 membrane protein At2g26240-like [Solanum lycopersicum]
Solyc01g106375.1.1	318	173.341472725524	34.0858571956565	-2.34637169736351	6.86420488700692e-08	Down	6.51163017646959e-09	NA	NA	NA	NA	gi|723664808|ref|XP_010315160.1|//PREDICTED: uncharacterized protein LOC104645397 [Solanum lycopersicum]
Solyc09g089730.3.1	1254	898.4970343155	15.3761941455764	-5.86874337935598	8.60110158514168e-22	Down	1.3369089611615e-23	NA	NA	NA	K06892//feruloyl-CoA ortho-hydroxylase [EC:1.14.11.-];K13229//2,4-dihydroxy-1,4-benzoxazin-3-one-glucoside dioxygenase [EC:1.14.20.2]	gi|460404471|ref|XP_004247706.1|//PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog isoform X2 [Solanum lycopersicum]
Solyc11g011020.2.1	2504	805.7798195044	211.5568286763	-1.929340420044	0.00315419870804535	Down	0.00079631742962764	NA	GO:0016740//transferase activity	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460409491|ref|XP_004250172.1|//PREDICTED: probable inactive receptor kinase At1g48480 [Solanum lycopersicum]
Solyc05g007490.3.1	2610	698.382196001032	2302.34282448571	1.72101398465909	1.41753043535222e-05	Up	2.07705089509824e-06	NA	GO:0016741//transferase activity, transferring one-carbon groups	GO:0006730//one-carbon metabolic process	K16302//metal transporter CNNM;K15449//tRNA wybutosine-synthesizing protein 1 [EC:4.1.3.44]	gi|460386217|ref|XP_004238796.1|//PREDICTED: probable methyltransferase PMT2 [Solanum lycopersicum]
Solyc02g079290.3.1	917	30.6510221834756	112.723587714246	1.87878234253455	0.000112206388618941	Up	1.98456580437184e-05	NA	NA	NA	K16223//protein FLOWERING LOCUS T	gi|460373975|ref|XP_004232787.1|//PREDICTED: protein MOTHER of FT and TF 1 [Solanum lycopersicum];gi|970008899|ref|XP_015065328.1|//PREDICTED: protein MOTHER of FT and TF 1-like [Solanum pennellii]
Solyc03g118140.3.1	666	26.4868181520602	6.82447213718781	-1.95648517876203	0.0431032725098296	Down	0.0157052376681637	GO:0016021//integral component of membrane	NA	NA	NA	gi|460380209|ref|XP_004235850.1|//PREDICTED: protein kish-like isoform X3 [Solanum lycopersicum]
Solyc07g047950.1.1	2067	614.256349239426	81.2925243109777	-2.91764627226043	1.9829204877202e-07	Down	2.03628520339539e-08	NA	NA	NA	K14494//DELLA protein	gi|697103418|ref|XP_009605526.1|//PREDICTED: scarecrow-like transcription factor PAT1 [Nicotiana tomentosiformis];gi|460395959|ref|XP_004243547.1|//PREDICTED: scarecrow-like transcription factor PAT1 [Solanum lycopersicum]
Solyc10g008270.3.1	1136	177.798458726887	1706.78119523517	3.26296339747841	1.70833223059972e-13	Up	6.80709391125355e-15	NA	NA	NA	NA	gi|460405419|ref|XP_004248173.1|//PREDICTED: uncharacterized protein LOC101265482 [Solanum lycopersicum]
Solyc12g006140.2.1	944	6407.67437924379	163.446332002426	-5.29291192953973	9.82194182542401e-24	Down	1.26307213723397e-25	GO:0031224//intrinsic component of membrane;GO:0009521//photosystem;GO:0009534//chloroplast thylakoid	GO:0043169//cation binding;GO:0046906//tetrapyrrole binding	GO:0006464//cellular protein modification process;GO:0006091//generation of precursor metabolites and energy	K08913//light-harvesting complex II chlorophyll a/b binding protein 2	gi|822092488|ref|NP_001295874.1|//chlorophyll a-b binding protein 5, chloroplastic [Solanum lycopersicum]
Solyc02g037640.2.1	849	8.7542705052423	0.83399243043262	-3.39188076915389	0.0299954123691877	Down	0.0103007206708411	NA	NA	NA	K15255//ATP-dependent DNA helicase PIF1 [EC:3.6.4.12]	gi|698511208|ref|XP_009800725.1|//PREDICTED: uncharacterized protein LOC104246586 isoform X2 [Nicotiana sylvestris]
Solyc02g077740.3.1	835	926.392652050357	2008.83656513318	1.11666447876977	1.74127866393404e-05	Up	2.60050097441085e-06	NA	NA	NA	K07466//replication factor A1	gi|460374229|ref|XP_004232914.1|//PREDICTED: uncharacterized protein At4g28440-like [Solanum lycopersicum]
Solyc09g065100.2.1	1733	56.1955217867793	2.37726857470053	-4.5630783591001	9.77303476058489e-10	Down	6.91048417356103e-11	NA	GO:0046983//protein dimerization activity	NA	K13422//transcription factor MYC2	gi|970049216|ref|XP_015086121.1|//PREDICTED: basic helix-loop-helix protein A isoform X1 [Solanum pennellii]
Solyc03g007330.3.1	5112	4491.60727955135	1607.89152045331	-1.48206171669345	2.28177148019404e-07	Down	2.36529241330685e-08	GO:0044464//cell part	GO:0004175//endopeptidase activity;GO:0032559//adenyl ribonucleotide binding;GO:0042623//ATPase activity, coupled	GO:0019538//protein metabolic process;GO:0009057//macromolecule catabolic process	K08955//ATP-dependent metalloprotease [EC:3.4.24.-]	gi|460376786|ref|XP_004234177.1|//PREDICTED: ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial [Solanum lycopersicum];gi|970016913|ref|XP_015069576.1|//PREDICTED: ATP-dependent zinc metalloprotease FTSH 11, chloroplastic/mitochondrial [Solanum pennellii]
Solyc12g006500.1.1	1053	409.201656328049	979.378019357577	1.25905383262474	0.00261280004727882	Up	0.000644727013306462	NA	NA	NA	K15280//solute carrier family 35, member C2	gi|460412348|ref|XP_004251563.1|//PREDICTED: probable sugar phosphate/phosphate translocator At4g32390 [Solanum lycopersicum]
Solyc02g086980.3.1	682	65.4291780331447	13.9616136302867	-2.22846845427642	0.000481258865265519	Down	9.86806701142693e-05	NA	NA	NA	K05391//cyclic nucleotide gated channel, other eukaryote	gi|970010993|ref|XP_015066396.1|//PREDICTED: putative cyclic nucleotide-gated ion channel 18 [Solanum pennellii]
Solyc10g083960.2.1	2499	386.507743067398	157.729823785016	-1.29304184373572	0.00440883494802794	Down	0.00116153441973541	NA	NA	NA	K00953//FAD synthetase [EC:2.7.7.2]	gi|460408088|ref|XP_004249480.1|//PREDICTED: FAD synthase-like [Solanum lycopersicum]
Solyc04g056530.2.1	1340	65.594806409476	202.71921027884	1.62782931296037	2.29290657320476e-05	Up	3.52209183993471e-06	GO:0030529//intracellular ribonucleoprotein complex	GO:0005198//structural molecule activity	GO:0010467//gene expression	K13832//3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25];K02881//large subunit ribosomal protein L18	gi|460383321|ref|XP_004237376.1|//PREDICTED: uncharacterized protein LOC101253374 [Solanum lycopersicum]
Solyc01g087570.2.1	548	1082.5372205536	310.667189664211	-1.8009748415564	0.00288276979362575	Down	0.000719269998849057	NA	NA	NA	NA	gi|697139518|ref|XP_009623848.1|//PREDICTED: uncharacterized protein LOC104114990 [Nicotiana tomentosiformis]
Solyc01g097820.3.1	4147	727.617681138038	172.25316880276	-2.07865007768917	3.48810646057406e-13	Down	1.45359438755099e-14	NA	NA	NA	K00417//ubiquinol-cytochrome c reductase subunit 7;K10406//kinesin family member C2/C3	gi|723662160|ref|XP_010312141.1|//PREDICTED: uncharacterized protein LOC104644367 [Solanum lycopersicum]
Solyc09g065760.3.1	2264	113.003579601819	420.387673687911	1.895351894775	1.16325916291046e-06	Up	1.38578212489259e-07	NA	NA	NA	NA	gi|460403455|ref|XP_004247206.1|//PREDICTED: uncharacterized protein LOC101268222 [Solanum lycopersicum]
Solyc08g061930.3.1	1808	657.843509352722	90.587040580794	-2.8603678526631	1.44947028571174e-10	Down	8.96328911583336e-12	NA	GO:0016645//oxidoreductase activity, acting on the CH-NH group of donors;GO:0050662//coenzyme binding	GO:0006725//cellular aromatic compound metabolic process	K00279//cytokinin dehydrogenase [EC:1.5.99.12]	gi|525314155|ref|NP_001266216.1|//cytokinin oxidase/dehydrogenase-like [Solanum lycopersicum]
Solyc01g008940.2.1	375	56.1562272831688	14.5259065531566	-1.9508178108347	0.000685060293719989	Down	0.000145985153540971	NA	NA	NA	NA	gi|20336341|gb|AAM18178.1|//anther protein [Nicotiana tabacum]
Solyc07g008630.1.1	3066	19.1491980747807	68.9023254273399	1.84726869756014	0.0155863622470527	Up	0.00483312015555508	NA	GO:0004871//signal transducer activity	NA	K13466//EIX receptor 1/2;K13465	gi|39577522|gb|AAR28378.1|//EIX receptor 2 [Solanum lycopersicum]
Solyc02g005070.2.1	1169	296.179440373256	29.2469612151523	-3.34011285749551	0.00174043766164326	Down	0.000409289593234954	NA	NA	NA	K07466//replication factor A1	gi|723726857|ref|XP_010325772.1|//PREDICTED: uncharacterized protein LOC101258482 [Solanum lycopersicum]
Solyc09g089690.3.1	1540	1868.57700907615	203.625694447315	-3.19794849822562	4.86747100226937e-11	Down	2.79768908807938e-12	NA	GO:0046872//metal ion binding;GO:0051213//dioxygenase activity	GO:0055114//oxidation-reduction process	K06892//feruloyl-CoA ortho-hydroxylase [EC:1.14.11.-];K13229//2,4-dihydroxy-1,4-benzoxazin-3-one-glucoside dioxygenase [EC:1.14.20.2]	gi|460404475|ref|XP_004247708.1|//PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog [Solanum lycopersicum]
Solyc08g023630.3.1	1713	13.4700864606791	0.430828836221036	-4.9665004853272	0.000862696790837942	Down	0.000188919921208175	NA	NA	NA	K02109//F-type H+-transporting ATPase subunit b;K13153//U11/U12 small nuclear ribonucleoprotein 25 kDa protein	gi|970046455|ref|XP_015084736.1|//PREDICTED: uncharacterized protein LOC107028206 [Solanum pennellii]
Solyc03g078150.3.1	2297	212.575337459992	7.60241827395045	-4.80537201557453	3.22310046203196e-20	Down	5.82676205488855e-22	NA	NA	NA	K15015//solute carrier family 32 (vesicular inhibitory amino acid transporter)	gi|460378639|ref|XP_004235076.1|//PREDICTED: vacuolar amino acid transporter 1 [Solanum lycopersicum]
Solyc04g081210.3.1	2987	1505.46587931281	596.629067503252	-1.33530383845812	0.00466327838482745	Down	0.00123586958834513	NA	NA	NA	K12472//epidermal growth factor receptor substrate 15;K11294//nucleolin;K13171//serine/arginine repetitive matrix protein 1;K14411//RNA-binding protein Musashi	gi|460385290|ref|XP_004238337.1|//PREDICTED: protein IQ-DOMAIN 32 [Solanum lycopersicum]
Solyc02g082850.3.1	1560	1418.7293539434	423.762750109758	-1.74327071613349	0.00386790267942419	Down	0.00100281287173365	NA	NA	NA	K00640//serine O-acetyltransferase [EC:2.3.1.30]	gi|460373495|ref|XP_004232554.1|//PREDICTED: serine acetyltransferase 2-like [Solanum lycopersicum]
Solyc01g103580.3.1	1210	143.035701585859	312.067411517997	1.12548242042845	0.00388138114225906	Up	0.00100665908706719	GO:0016021//integral component of membrane	NA	NA	K14488//SAUR family protein;K08145//MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8	gi|460369208|ref|XP_004230455.1|//PREDICTED: uncharacterized protein LOC101268616 [Solanum lycopersicum]
Solyc09g011580.2.1	915	2480.63160688931	9577.14366858728	1.94888794441281	0.00207021010775198	Up	0.000496100372101442	NA	NA	NA	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|460401754|ref|XP_004246382.1|//PREDICTED: probable glutathione S-transferase [Solanum lycopersicum]
Solyc02g030383.1.1	394	11.0886293497912	1.56102948952441	-2.82851135022692	0.0416336486509037	Down	0.0150686867601117	NA	NA	NA	NA	gi|970011410|ref|XP_015066616.1|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 [Solanum pennellii]
Solyc11g010840.2.1	2446	231.14085535218	580.094303227632	1.32751516529482	0.00550616879101541	Up	0.00148983447345985	NA	NA	NA	K13162//poly(rC)-binding protein 2/3/4	gi|460409469|ref|XP_004250161.1|//PREDICTED: KH domain-containing protein At4g18375-like [Solanum lycopersicum]
Solyc06g006000.3.1	953	79.5321851161982	2121.5979360375	4.73746865787359	9.80494092393147e-46	Up	2.04665532928344e-48	NA	NA	NA	NA	gi|460389514|ref|XP_004240397.1|//PREDICTED: uncharacterized protein LOC101264428 [Solanum lycopersicum]
Solyc07g052800.2.1	1155	14.3642984034289	97.7289364453589	2.76629826239381	0.00574920095953795	Up	0.00156641474494031	NA	NA	NA	K03283//heat shock 70kDa protein 1/8;K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|970068067|ref|XP_015061155.1|//PREDICTED: TMV resistance protein N-like [Solanum pennellii]
Solyc04g015150.3.1	1797	600.037356468458	262.702173490256	-1.19162418445551	0.00306162504198304	Down	0.000770199321915295	NA	NA	NA	K19269//phosphoglycolate phosphatase [EC:3.1.3.18 3.1.3.48]	gi|697127456|ref|XP_009617774.1|//PREDICTED: phosphoglycolate phosphatase 2 [Nicotiana tomentosiformis];gi|970021314|ref|XP_015071917.1|//PREDICTED: phosphoglycolate phosphatase 2 isoform X2 [Solanum pennellii];gi|723689045|ref|XP_010319217.1|//PREDICTED: phosphoglycolate phosphatase 2 [Solanum lycopersicum]
Solyc07g055730.3.1	2625	94.207547404663	42.485778129216	-1.14886265731232	0.0328130286714691	Down	0.0114358810972952	NA	GO:0016843//amine-lyase activity	GO:0008152//metabolic process	K01757//strictosidine synthase [EC:4.3.3.2]	gi|723714785|ref|XP_010323662.1|//PREDICTED: protein trichome birefringence-like 43 [Solanum lycopersicum]
Solyc04g071075.1.1	654	49.1034073776474	2.21927780698798	-4.46766096024987	0.000112701247744719	Down	1.99541869236401e-05	NA	NA	NA	NA	NA
Solyc11g071740.2.1	606	417.824914243426	7918.12262090199	4.24418798355018	1.75227180315612e-06	Up	2.15931511153799e-07	NA	NA	NA	K13448//calcium-binding protein CML	gi|460411634|ref|XP_004251211.1|//PREDICTED: putative calcium-binding protein CML19 [Solanum lycopersicum]
Solyc08g078660.3.1	3338	747.445215776744	362.687099668	-1.04324240907546	0.000114536769997729	Down	2.03175968547485e-05	NA	GO:0005515//protein binding	GO:0044267//cellular protein metabolic process	K09531//DnaJ homolog subfamily C member 11	gi|460400485|ref|XP_004245765.1|//PREDICTED: chaperone protein dnaJ 13 [Solanum lycopersicum];gi|565378007|ref|XP_006355455.1|//PREDICTED: chaperone protein dnaJ 13 isoform X1 [Solanum tuberosum]
Solyc02g070090.1.1	1605	5.57588198193434	106.651299596311	4.25755770976026	4.62790424411845e-07	Up	5.06272788543549e-08	NA	NA	NA	NA	gi|460374704|ref|XP_004233150.1|//PREDICTED: reticuline oxidase-like protein [Solanum lycopersicum]
Solyc02g082740.1.1	573	368.225522534229	67.7683138059832	-2.44190684633343	0.000632764776711838	Down	0.000133934577575935	NA	NA	NA	K19027//zinc finger FYVE domain-containing protein 26	gi|976924804|gb|KVI08737.1|//Plant disease resistance response protein [Cynara cardunculus var. scolymus]
Solyc04g083140.2.1	1676	2.17095685162123	133.785426689571	5.9454461085852	2.643245890732e-16	Up	7.35001280187145e-18	NA	GO:0005506//iron ion binding;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30];K15472//premnaspirodiene oxygenase [EC:1.14.13.121]	gi|460383307|ref|XP_004237369.1|//PREDICTED: premnaspirodiene oxygenase [Solanum lycopersicum]
Solyc04g082630.3.1	1700	18349.4869786518	2097.19476604043	-3.12920697270538	4.78201275121609e-27	Down	4.4027029579185e-29	NA	GO:0016620//oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor;GO:0000166//nucleotide binding	GO:0019318//hexose metabolic process	K05298//glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) [EC:1.2.1.13]	gi|971541388|ref|XP_006342156.2|//PREDICTED: glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic [Solanum tuberosum]
Solyc03g005775.1.1	243	15.3903052209018	1.2189286397345	-3.65833627028799	0.00557740165707706	Down	0.00151243465987907	GO:0031224//intrinsic component of membrane;GO:0009521//photosystem;GO:0009534//chloroplast thylakoid	GO:0043169//cation binding;GO:0046906//tetrapyrrole binding	GO:0006464//cellular protein modification process;GO:0006091//generation of precursor metabolites and energy	K08912//light-harvesting complex II chlorophyll a/b binding protein 1	gi|475604137|gb|EMT25652.1|//hypothetical protein F775_43704 [Aegilops tauschii]
Solyc05g053400.2.1	1410	2354.9651722429	128.757694785517	-4.19297516590118	0.00404964855706519	Down	0.0010552815365455	NA	NA	NA	K13495//cis-zeatin O-glucosyltransferase [EC:2.4.1.215]	gi|460389145|ref|XP_004240219.1|//PREDICTED: zeatin O-xylosyltransferase-like [Solanum lycopersicum]
Solyc03g111050.3.1	2406	2051.33132199126	632.604822431522	-1.69718406951235	0.000166573165045663	Down	3.07962911371137e-05	NA	NA	NA	NA	gi|460381218|ref|XP_004236349.1|//PREDICTED: uncharacterized protein LOC778252 [Solanum lycopersicum]
Solyc03g007600.3.1	3511	1443.02305555768	631.943948769542	-1.19122584317325	0.00024048748479149	Down	4.59407469642308e-05	NA	NA	NA	K20858	gi|460376822|ref|XP_004234195.1|//PREDICTED: pentatricopeptide repeat-containing protein At4g21190 [Solanum lycopersicum]
Solyc02g084750.3.1	2262	2457.00201874816	425.771934596936	-2.5287462824586	3.47018763206269e-11	Down	1.95188353093134e-12	GO:0044424//intracellular part	GO:0003824//catalytic activity;GO:0051536//iron-sulfur cluster binding	GO:0008033//tRNA processing	K15865//threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:2.8.4.5];K14441//ribosomal protein S12 methylthiotransferase [EC:2.8.4.4]	gi|460373272|ref|XP_004232445.1|//PREDICTED: CDK5RAP1-like protein [Solanum lycopersicum]
Solyc00g127670.2.1	2468	572.890018925393	187.660390361969	-1.610134031458	2.35366830492822e-06	Down	2.96357966827476e-07	NA	NA	NA	K00993//ethanolaminephosphotransferase [EC:2.7.8.1]	gi|460416242|ref|XP_004253455.1|//PREDICTED: uncharacterized protein LOC101245935, partial [Solanum lycopersicum]
Solyc08g076885.1.1	1314	615.910322378136	94.035661986388	-2.71144041544822	0.000680923252170783	Down	0.000144951270804657	NA	NA	NA	K02184//formin 2	gi|723725544|ref|XP_010325557.1|//PREDICTED: glycine-rich cell wall structural protein 1.8-like [Solanum lycopersicum]
Solyc09g011810.3.1	1579	12048.3248339129	1768.78172583673	-2.76800464177454	2.86874351032663e-14	Down	1.03081435215256e-15	GO:0044424//intracellular part	GO:0019203//carbohydrate phosphatase activity;GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	GO:0005975//carbohydrate metabolic process	K03841//fructose-1,6-bisphosphatase I [EC:3.1.3.11]	gi|460401720|ref|XP_004246365.1|//PREDICTED: fructose-1,6-bisphosphatase, chloroplastic-like [Solanum lycopersicum]
Solyc06g048530.3.1	1108	1023.79365623529	2.05369928666975	-8.96148430650563	8.69990569337199e-34	Down	4.63528515830712e-36	NA	GO:0016790//thiolester hydrolase activity;GO:0004416//hydroxyacylglutathione hydrolase activity;GO:0046914//transition metal ion binding	GO:0019243//methylglyoxal catabolic process to D-lactate via S-lactoyl-glutathione	K01069//hydroxyacylglutathione hydrolase [EC:3.1.2.6]	gi|460390439|ref|XP_004240841.1|//PREDICTED: hydroxyacylglutathione hydrolase cytoplasmic [Solanum lycopersicum]
Solyc01g005520.3.1	1231	5774.19751346244	570.230301374205	-3.34000384799991	1.20747440963569e-33	Down	6.52615884140356e-36	NA	NA	NA	NA	gi|460365514|ref|XP_004228646.1|//PREDICTED: uncharacterized protein LOC101254513 [Solanum lycopersicum]
BGI_novel_G000434	536	24.3952712312708	0.431086708727183	-5.82247963128221	2.29238859476946e-05	Down	3.52044170659392e-06	NA	NA	NA	K03549//KUP system potassium uptake protein;K09872//aquaporin PIP;K17982//geranyllinalool synthase [EC:4.2.3.144];K18660//malonyl-CoA/methylmalonyl-CoA synthetase [EC:6.2.1.-];K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|698585678|ref|XP_009778714.1|//PREDICTED: uncharacterized protein LOC104228027 [Nicotiana sylvestris]
Solyc11g067060.3.1	1423	1188.22605355216	574.982585366717	-1.04721916055832	0.000209228068965905	Down	3.95714634685031e-05	NA	NA	NA	K01104//protein-tyrosine phosphatase [EC:3.1.3.48]	gi|460411263|ref|XP_004251033.1|//PREDICTED: low molecular weight phosphotyrosine protein phosphatase [Solanum lycopersicum]
Solyc11g007730.2.1	1728	146.352159956029	34.7860284410387	-2.07286415869299	0.000193644187225265	Down	3.63353525604585e-05	NA	NA	NA	K07870//Ras homolog gene family, member T1	gi|460409172|ref|XP_004250013.1|//PREDICTED: bark storage protein A-like [Solanum lycopersicum]
Solyc04g054910.3.1	1192	3970.5857979927	8384.42222224378	1.07835949963926	0.00656072525706121	Up	0.00181772293259788	NA	NA	NA	K09286//EREBP-like factor	gi|460383388|ref|XP_004237407.1|//PREDICTED: ethylene-responsive transcription factor RAP2-4-like [Solanum lycopersicum]
Solyc07g039190.3.1	2059	1111.37178189437	105.906266581491	-3.39148165264953	8.94471648535296e-11	Down	5.35789451019912e-12	NA	NA	NA	NA	gi|723717249|ref|XP_004243957.2|//PREDICTED: uncharacterized protein LOC101245860 isoform X3 [Solanum lycopersicum];gi|723717243|ref|XP_010324068.1|//PREDICTED: uncharacterized protein LOC101245860 isoform X1 [Solanum lycopersicum]
Solyc02g080370.3.1	3761	1523.01008400314	4302.98919527294	1.49841372362397	2.80973705262789e-06	Up	3.59648018440591e-07	GO:0009705//plant-type vacuole membrane;GO:0016021//integral component of membrane	NA	GO:0046786//viral replication complex formation and maintenance	K13989//Derlin-2/3	gi|350537711|ref|NP_001234306.1|//tobamovirus multiplication 1 homolog 3 [Solanum lycopersicum];gi|590625982|ref|XP_007026037.1|//Tobamovirus multiplication 1 isoform 1 [Theobroma cacao]
Solyc04g054730.3.1	2533	1050.98055466396	54.6173609316077	-4.26623256056408	1.07744548124246e-16	Down	2.85546346042712e-18	GO:0005887//integral component of plasma membrane	GO:0008271//secondary active sulfate transmembrane transporter activity	GO:1902358//sulfate transmembrane transport	K17469//sulfate transporter 2, low-affinity	gi|565324198|ref|NP_001274303.1|//sulfate transporter 2.1-like [Solanum lycopersicum];gi|697131153|ref|XP_009619632.1|//PREDICTED: low affinity sulfate transporter 3-like [Nicotiana tomentosiformis]
Solyc01g112050.3.1	5829	1041.81882459862	3312.99383501678	1.6690311083251	0.00663986926158144	Up	0.00184435312872018	NA	NA	NA	NA	gi|460371260|ref|XP_004231460.1|//PREDICTED: uncharacterized protein LOC101257515 [Solanum lycopersicum]
Solyc01g014180.3.1	1099	1658.46841862999	4535.39256804095	1.45137589101796	1.47239922317266e-07	Up	1.47689962336277e-08	NA	GO:0003677//DNA binding;GO:0046914//transition metal ion binding;GO:0008270//zinc ion binding;GO:0003676//nucleic acid binding	NA	NA	gi|970003187|ref|XP_015062367.1|//PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 8-like isoform X1 [Solanum pennellii]
Solyc12g088750.2.1	3898	1031.82750411851	175.715652518592	-2.55388719265488	2.33101152326777e-05	Down	3.5832307745476e-06	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460414823|ref|XP_004252762.1|//PREDICTED: probable serine/threonine-protein kinase At1g01540 [Solanum lycopersicum]
Solyc09g083050.3.1	1871	448.250828561579	1998.32498522246	2.15641307106052	1.99950039440614e-05	Up	3.02891367335119e-06	NA	NA	NA	K15397//3-ketoacyl-CoA synthase [EC:2.3.1.199]	gi|460404306|ref|XP_004247624.1|//PREDICTED: 3-ketoacyl-CoA synthase 19-like [Solanum lycopersicum]
Solyc06g082280.3.1	3864	1625.73269650285	410.490134467473	-1.98567061406702	7.18793868381825e-10	Down	4.9941545052323e-11	GO:0005777//peroxisome	GO:0016787//hydrolase activity;GO:0003824//catalytic activity	NA	K02883//large subunit ribosomal protein L18e;K05909//laccase [EC:1.10.3.2];K15113//solute carrier family 25 (mitochondrial iron transporter), member 28/37	gi|697125504|ref|XP_009616772.1|//PREDICTED: uncharacterized protein At1g18480 [Nicotiana tomentosiformis];gi|970033319|ref|XP_015077964.1|//PREDICTED: laccase-3-like [Solanum pennellii];gi|460393805|ref|XP_004242499.1|//PREDICTED: uncharacterized protein At1g18480 [Solanum lycopersicum]
Solyc05g007180.3.1	1690	641.739902332031	241.314327080313	-1.41107511803078	0.0388869033114651	Down	0.0139078513968059	GO:0043231//intracellular membrane-bounded organelle	GO:0003677//DNA binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0006351//transcription, DNA-templated	K09338//homeobox-leucine zipper protein	gi|831181961|ref|NP_001296720.1|//jasmonic acid 1 2 [Solanum lycopersicum]
Solyc02g090510.3.1	2562	495.243871082249	174.77491768432	-1.50264096557645	0.041057579383837	Down	0.0148096837519528	NA	NA	NA	K00924	gi|460372460|ref|XP_004232048.1|//PREDICTED: CDPK-related kinase 5 [Solanum lycopersicum]
Solyc03g097950.3.1	557	2672.20070472951	977.786518405553	-1.45043695150054	0.00332924994451396	Down	0.000845342575742846	GO:0030529//intracellular ribonucleoprotein complex;GO:0009532//plastid stroma;GO:0043232//intracellular non-membrane-bounded organelle;GO:0009526//plastid envelope	GO:0005198//structural molecule activity	GO:0022613//ribonucleoprotein complex biogenesis;GO:0010467//gene expression	K02904//large subunit ribosomal protein L29	gi|460379208|ref|XP_004235356.1|//PREDICTED: 50S ribosomal protein L29, chloroplastic-like [Solanum lycopersicum]
Solyc05g050750.1.1	453	11.5462307558591	0.699144035414472	-4.04568844770436	0.0157729975936325	Down	0.00489804841779307	NA	GO:0046872//metal ion binding	NA	K13448//calcium-binding protein CML;K01148//poly(A)-specific ribonuclease [EC:3.1.13.4]	gi|723702445|ref|XP_010321498.1|//PREDICTED: calmodulin-like protein 3 [Solanum lycopersicum]
Solyc09g010520.3.1	2618	2356.49531057201	7376.23306695515	1.64624143095434	7.02996663532675e-05	Up	1.18729606473332e-05	NA	NA	NA	K12492//ADP-ribosylation factor GTPase-activating protein 1	gi|460401829|ref|XP_004246418.1|//PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD6 [Solanum lycopersicum]
Solyc07g042690.3.1	648	0.690009903965568	10.3144606176369	3.90190749939142	0.0213807177550642	Up	0.00695981094956672	NA	NA	NA	K17535//serine/threonine-protein kinase TNNI3K [EC:2.7.11.1]	gi|970041728|ref|XP_015082254.1|//PREDICTED: serine/threonine-protein kinase HT1-like [Solanum pennellii]
Solyc03g082860.3.1	1670	105.336584296719	23.5467798552362	-2.16140490134229	0.00861779040786353	Down	0.00247021053513011	NA	NA	NA	K11446//histone demethylase JARID1 [EC:1.14.11.-];K11643//chromodomain-helicase-DNA-binding protein 4 [EC:3.6.4.12]	gi|460378462|ref|XP_004234990.1|//PREDICTED: histone-lysine N-methyltransferase ATXR6 [Solanum lycopersicum]
Solyc01g095000.3.1	1200	2199.98030473045	135.062910935229	-4.0257871464446	8.40489650535899e-13	Down	3.7061997039808e-14	NA	NA	NA	NA	gi|460368179|ref|XP_004229946.1|//PREDICTED: uncharacterized protein LOC101266162 isoform X1 [Solanum lycopersicum]
Solyc04g081540.3.1	2252	303.787405324534	100.526479841968	-1.59548648451874	4.22116350561847e-06	Down	5.54157517026549e-07	NA	NA	NA	K02335//DNA polymerase I [EC:2.7.7.7]	gi|460385346|ref|XP_004238365.1|//PREDICTED: uncharacterized protein LOC101264926 [Solanum lycopersicum]
Solyc03g059314.1.1	282	35.727748574954	8.90914093746882	-2.00368677178413	0.00536086180369011	Down	0.00144592202219702	NA	NA	NA	NA	NA
Solyc03g032210.3.1	1960	153.982678728494	34.1885700318068	-2.17118208642386	3.52268776314743e-05	Down	5.60678274513177e-06	NA	NA	NA	K00666//fatty-acyl-CoA synthase [EC:6.2.1.-];K01904//4-coumarate--CoA ligase [EC:6.2.1.12]	gi|460377472|ref|XP_004234517.1|//PREDICTED: probable acyl-activating enzyme 2 [Solanum lycopersicum]
Solyc08g078420.1.1	444	8.11644120125808	1.04486239968944	-2.95753432760268	0.0384333545453022	Down	0.0137083930834947	NA	NA	NA	K09286//EREBP-like factor	gi|970046153|ref|XP_015084575.1|//PREDICTED: ethylene-responsive transcription factor ERF038-like [Solanum pennellii]
Solyc00g273110.2.1	1738	849.619441011911	111.945851393143	-2.9240157140273	8.8377766757709e-25	Down	1.0047420180819e-26	NA	NA	NA	NA	gi|565346015|ref|XP_006340066.1|//PREDICTED: uncharacterized protein LOC102588737 [Solanum tuberosum]
Solyc08g082610.3.1	1934	6317.13213576242	56473.911903337	3.16024291455876	5.34310714055934e-13	Up	2.27840859132245e-14	NA	NA	NA	K10450//kelch-like protein 12;K10442//kelch-like protein 1/4/5;K10457//kelch-like protein 20;K10443//kelch-like protein 2/3	gi|460399954|ref|XP_004245501.1|//PREDICTED: B2 protein [Solanum lycopersicum]
Solyc06g069693.1.1	489	11.085317566796	123.71863665346	3.48034083497396	0.00015114622541807	Up	2.76173698001856e-05	NA	NA	NA	K12127//pseudo-response regulator 1	gi|723708628|ref|XP_010322571.1|//PREDICTED: two-component response regulator-like APRR1 isoform X2 [Solanum lycopersicum]
Solyc05g015480.3.1	1711	20.3535597175542	111.981556518531	2.4599080979153	0.00989425460530923	Up	0.00288957375997457	NA	GO:0048037//cofactor binding	NA	K15631//molybdenum cofactor sulfurtransferase [EC:2.8.1.9]	gi|460387072|ref|XP_004239213.1|//PREDICTED: uncharacterized protein LOC101244665 [Solanum lycopersicum]
Solyc10g086490.2.1	5803	7.00251350682345	51.3764799215596	2.87516328068022	4.05015752278605e-05	Up	6.51123057841666e-06	NA	NA	NA	K01102//pyruvate dehydrogenase phosphatase [EC:3.1.3.43]	gi|460408815|ref|XP_004249837.1|//PREDICTED: probable protein phosphatase 2C 4 [Solanum lycopersicum]
Solyc10g080040.2.1	1486	2174.92224997178	563.854802615545	-1.94756821844212	1.01657825659591e-09	Down	7.21850894146121e-11	NA	NA	NA	K14769//U3 small nucleolar RNA-associated protein 11;K02132//F-type H+-transporting ATPase subunit alpha	gi|723738425|ref|XP_004249256.2|//PREDICTED: uncharacterized protein LOC101253437 [Solanum lycopersicum];gi|970058819|ref|XP_015056120.1|//PREDICTED: uncharacterized protein LOC107002571 [Solanum pennellii]
Solyc07g045315.1.1	639	539.780984151978	101.742013835016	-2.40745859761029	0.00242508989443912	Down	0.000592532587522306	NA	NA	NA	K19199//histone-lysine N-methyltransferase SETD3 [EC:2.1.1.43]	gi|970041996|ref|XP_015082391.1|//PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic [Solanum pennellii]
Solyc07g042440.3.1	1050	9299.30340105814	766.85942526386	-3.6000886064393	8.99496577728693e-28	Down	7.61091856062373e-30	NA	GO:0016209//antioxidant activity;GO:0016705//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	GO:0019725//cellular homeostasis;GO:0008152//metabolic process	K03564//peroxiredoxin Q/BCP [EC:1.11.1.15]	gi|840083088|ref|NP_001296952.1|//peroxiredoxin Q, chloroplastic [Solanum lycopersicum]
Solyc10g074740.1.1	600	602.326856467926	8216.74305911427	3.76994816165326	6.14540477422151e-11	Up	3.60551182146439e-12	NA	GO:0046872//metal ion binding	GO:0000904//cell morphogenesis involved in differentiation	K13448//calcium-binding protein CML	gi|460407148|ref|XP_004249018.1|//PREDICTED: calcium-binding protein CAST [Solanum lycopersicum]
Solyc02g062560.3.1	5328	419.216283062477	914.188640905523	1.12479713843795	0.00597655963516563	Up	0.00163827417463128	NA	GO:0003824//catalytic activity	NA	K08900//mitochondrial chaperone BCS1	gi|350535771|ref|NP_001234724.1|//Tm-1 protein [Solanum lycopersicum]
Solyc04g008850.1.1	1440	222.342784936324	60.6666519320363	-1.87380999043026	0.0312874178351392	Down	0.0108312530015138	NA	NA	NA	K00924;K02882//large subunit ribosomal protein L18Ae	gi|460382279|ref|XP_004236867.1|//PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2-like [Solanum lycopersicum]
Solyc05g052370.3.1	1371	58.8548071961556	9.99544163827818	-2.55781804034336	0.0224475993961496	Down	0.00736567084703687	NA	NA	NA	K05909//laccase [EC:1.10.3.2]	gi|460388608|ref|XP_004239959.1|//PREDICTED: laccase-12 [Solanum lycopersicum]
Solyc04g072910.3.1	1968	1279.26496784992	7485.60256538031	2.54880333948398	1.2665016168347e-17	Up	3.03548732527475e-19	NA	NA	NA	K20367//endoplasmic reticulum-Golgi intermediate compartment protein 3	gi|460384387|ref|XP_004237893.1|//PREDICTED: endoplasmic reticulum-Golgi intermediate compartment protein 3-like [Solanum lycopersicum]
Solyc12g005950.2.1	2915	1817.91524808634	453.954421343498	-2.00166558396811	1.1428056074185e-06	Down	1.36013802910663e-07	NA	GO:0046914//transition metal ion binding;GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	GO:0008152//metabolic process	K10143//E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]	gi|887227076|ref|NP_001234047.2|//COP1 homolog [Solanum lycopersicum];gi|971558515|ref|XP_015166213.1|//PREDICTED: E3 ubiquitin-protein ligase COP1-like isoform X2 [Solanum tuberosum];gi|970068154|ref|XP_015061197.1|//PREDICTED: E3 ubiquitin-protein ligase COP1-like [Solanum pennellii]
Solyc03g123490.1.1	2349	769.583994367366	236.236590941576	-1.70384635193591	0.0094947408408225	Down	0.00276051060676962	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13199//plasminogen activator inhibitor 1 RNA-binding protein;K12663//Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase [EC:5.3.3.-]	gi|460379575|ref|XP_004235537.1|//PREDICTED: subtilisin-like protease [Solanum lycopersicum]
Solyc11g006300.2.1	1104	1590.69932251874	8.6097848314665	-7.52946826126823	2.71048893771521e-38	Down	9.59804864630031e-41	NA	NA	NA	K10258//very-long-chain enoyl-CoA reductase [EC:1.3.1.93]	gi|460408995|ref|XP_004249926.1|//PREDICTED: very-long-chain enoyl-CoA reductase-like [Solanum lycopersicum]
Solyc03g117970.3.1	3583	538.747379532562	244.021872837092	-1.14259847777085	0.000215531709571983	Down	4.08279464755039e-05	GO:0005622//intracellular	GO:0003676//nucleic acid binding	NA	K10798//poly [ADP-ribose] polymerase [EC:2.4.2.30]	gi|460380237|ref|XP_004235864.1|//PREDICTED: poly [ADP-ribose] polymerase 1 isoform X2 [Solanum lycopersicum]
Solyc00g049520.2.1	497	56.9773163268224	141.158470382327	1.30885612563581	0.00706269591387521	Up	0.00197693489955441	NA	NA	NA	NA	NA
Solyc05g005865.1.1	2104	166.136737229309	44.0839778208928	-1.91404481331787	0.00276437886470272	Down	0.000686767002133726	NA	NA	NA	K14496//abscisic acid receptor PYR/PYL family	gi|723696964|ref|XP_010320602.1|//PREDICTED: MLP-like protein 423 [Solanum lycopersicum]
Solyc01g068475.1.1	1841	728.936755032525	129.473246102752	-2.49313963171406	6.11730826319372e-10	Down	4.19327937081156e-11	NA	NA	NA	NA	gi|723657759|ref|XP_010320706.1|//PREDICTED: uncharacterized protein LOC101254233 [Solanum lycopersicum]
Solyc06g076800.3.1	2832	26.6197243444297	1.57899987103868	-4.07541267328697	0.00396050774390034	Down	0.00102983830406474	NA	GO:0005506//iron ion binding;GO:0016712//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen	GO:0008152//metabolic process	K15401//fatty acid omega-hydroxylase [EC:1.14.-.-]	gi|460391128|ref|XP_004241175.1|//PREDICTED: cytochrome P450 86A1 [Solanum lycopersicum]
Solyc01g091870.3.1	3423	422.723910661794	1.05886493799412	-8.64105332789338	1.06559235307699e-17	Down	2.51821064503806e-19	NA	NA	GO:0006810//transport	K12307//MFS transporter, ceroid-lipofuscinosis neuronal protein 7	gi|969995847|ref|XP_015081526.1|//PREDICTED: SPX domain-containing membrane protein At4g22990-like [Solanum pennellii];gi|565344796|ref|XP_006339490.1|//PREDICTED: SPX domain-containing membrane protein At4g22990-like isoform X1 [Solanum tuberosum];gi|460368002|ref|XP_004229859.1|//PREDICTED: SPX domain-containing membrane protein At4g22990-like isoform X1 [Solanum lycopersicum]
Solyc11g006590.2.1	3263	784.204839239242	25.6766170940841	-4.93270350022081	3.00196493359614e-21	Down	4.85631721030537e-23	NA	NA	NA	K20617	gi|460409035|ref|XP_004249946.1|//PREDICTED: cytochrome P450 83B1-like [Solanum lycopersicum]
Solyc09g008840.3.1	2066	1602.46309678362	144.474232296164	-3.47140702443113	9.49262200485679e-16	Down	2.79173951164157e-17	NA	NA	NA	K00873//pyruvate kinase [EC:2.7.1.40]	gi|460402152|ref|XP_004246578.1|//PREDICTED: pyruvate kinase, cytosolic isozyme [Solanum lycopersicum]
Solyc12g006740.1.1	294	45.2652940608778	0.771564633975584	-5.87447450007418	4.97127129029938e-05	Down	8.12392536287872e-06	NA	NA	NA	NA	NA
Solyc08g079370.2.1	1631	7.47345824952829	0.409632636370872	-4.18937341879553	0.00920837239162123	Down	0.00266283558275673	NA	NA	NA	K20770;K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30];K05280//flavonoid 3'-monooxygenase [EC:1.14.13.21]	gi|460401258|ref|XP_004246143.1|//PREDICTED: flavonoid 3'-monooxygenase-like [Solanum lycopersicum]
Solyc09g098310.3.1	926	2805.32962992428	14191.4382971918	2.33877860896127	1.72955467051528e-08	Up	1.47116585586547e-09	NA	NA	NA	NA	NA
Solyc07g064870.3.1	1793	114.225708391438	387.30633721541	1.76158771763317	5.17508400983006e-05	Up	8.49911292206323e-06	NA	NA	NA	K01179//endoglucanase [EC:3.2.1.4]	gi|460397080|ref|XP_004244096.1|//PREDICTED: endoglucanase 11-like [Solanum lycopersicum]
Solyc02g092250.3.1	1960	128.279385600729	470.731238311863	1.87561424618271	0.00396050774390034	Up	0.00102971186509429	NA	GO:0005506//iron ion binding;GO:0004497//monooxygenase activity	NA	K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30];K15472//premnaspirodiene oxygenase [EC:1.14.13.121]	gi|460372229|ref|XP_004231934.1|//PREDICTED: premnaspirodiene oxygenase-like [Solanum lycopersicum]
Solyc02g089515.1.1	1810	146.168638546037	731.944063049459	2.32409959377601	0.000652930405030553	Up	0.000138529889124568	GO:0005634//nucleus	GO:0008270//zinc ion binding	GO:0009416//response to light stimulus;GO:0009909//regulation of flower development	K12135//zinc finger protein CONSTANS	gi|350538605|ref|NP_001233839.1|//CONSTANS 1 [Solanum lycopersicum];gi|45544887|gb|AAS67379.1|//CONSTANS 3 [Solanum lycopersicum];gi|460372605|ref|XP_004232119.1|//PREDICTED: zinc finger protein CONSTANS-LIKE 2-like [Solanum lycopersicum]
Solyc09g082870.2.1	3090	31.4575020699356	130.094578233215	2.04808481710438	0.0248699923162265	Up	0.00829494152548066	NA	NA	NA	K01537//Ca2+-transporting ATPase [EC:3.6.3.8]	gi|723732261|ref|XP_010326729.1|//PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type [Solanum lycopersicum]
Solyc09g076000.3.1	2315	1025.27087998073	460.365346483825	-1.15515397960478	0.000750864107465121	Down	0.000161827056409845	NA	NA	NA	K08867//WNK lysine deficient protein kinase [EC:2.7.11.1]	gi|723731123|ref|XP_010326545.1|//PREDICTED: probable serine/threonine-protein kinase WNK9 isoform X2 [Solanum lycopersicum];gi|460403765|ref|XP_004247358.1|//PREDICTED: probable serine/threonine-protein kinase WNK9 isoform X1 [Solanum lycopersicum]
Solyc08g013670.3.1	787	17229.8757732076	1223.56257367622	-3.81575251117028	1.92667943663939e-06	Down	2.38644541820214e-07	GO:0034357//photosynthetic membrane	NA	NA	K02701//photosystem I subunit PsaN	gi|460398361|ref|XP_004244730.1|//PREDICTED: photosystem I reaction center subunit N, chloroplastic [Solanum lycopersicum]
Solyc11g007690.2.1	2299	1062.20635996482	472.821246229578	-1.16769730310426	0.0219477616845832	Down	0.00717466341038446	NA	GO:0000287//magnesium ion binding;GO:0030955//potassium ion binding;GO:0004743//pyruvate kinase activity;GO:0016301//kinase activity	GO:0006096//glycolytic process	K00873//pyruvate kinase [EC:2.7.1.40]	gi|460409164|ref|XP_004250009.1|//PREDICTED: pyruvate kinase, cytosolic isozyme-like [Solanum lycopersicum];gi|661896655|emb|CDO99844.1|//unnamed protein product [Coffea canephora]
Solyc03g006905.1.1	905	12.7524861201709	0.893239355216964	-3.83558790404252	0.025496892137976	Down	0.00854870078951445	NA	NA	NA	NA	NA
Solyc05g006530.3.1	12709	1273.12992936584	278.863275225938	-2.19074980418665	2.87104703322814e-10	Down	1.86316269749896e-11	NA	NA	NA	K11644//paired amphipathic helix protein Sin3a	gi|460386094|ref|XP_004238735.1|//PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic isoform X1 [Solanum lycopersicum]
Solyc11g007080.1.1	759	111.703070664519	392.931958260671	1.81461066564171	0.00301506841158033	Up	0.000756657100946681	NA	NA	NA	K20363//protein transport protein YIP1	gi|970060901|ref|XP_015057225.1|//PREDICTED: protein YIPF5 homolog [Solanum pennellii]
Solyc04g079300.3.1	3762	706.996103824858	5445.43214717956	2.94527237550949	1.75412072814465e-24	Up	2.09882493564348e-26	NA	NA	NA	NA	gi|460384970|ref|XP_004238179.1|//PREDICTED: uncharacterized protein LOC101261408 [Solanum lycopersicum]
Solyc02g070760.3.1	1163	1103.29525813816	318.363420947598	-1.79307244018676	3.19581853437557e-09	Down	2.43962887967839e-10	NA	GO:0048037//cofactor binding	GO:0008152//metabolic process	K01256//aminopeptidase N [EC:3.4.11.2];K19073//divinyl chlorophyllide a 8-vinyl-reductase [EC:1.3.1.75];K08956//AFG3 family protein [EC:3.4.24.-]	gi|460374620|ref|XP_004233108.1|//PREDICTED: uncharacterized protein At2g34460, chloroplastic-like [Solanum lycopersicum]
Solyc09g074940.2.1	2295	3165.59711663115	857.288385760508	-1.88462515282916	5.15711935834093e-07	Down	5.69382269994254e-08	NA	NA	NA	NA	gi|723731383|ref|XP_010326580.1|//PREDICTED: translocase of chloroplast 159, chloroplastic [Solanum lycopersicum]
Solyc11g069925.1.1	3754	548.432630004024	208.409585155644	-1.39589277800708	6.54194283069961e-06	Down	8.96139850261707e-07	NA	NA	NA	K01657//anthranilate synthase component I [EC:4.1.3.27];K19613//leucine-rich repeat protein SHOC2;K15078//structure-specific endonuclease subunit SLX1 [EC:3.6.1.-];K12818//ATP-dependent RNA helicase DHX8/PRP22 [EC:3.6.4.13]	gi|723745960|ref|XP_010313440.1|//PREDICTED: LOW QUALITY PROTEIN: putative disease resistance RPP13-like protein 1 [Solanum lycopersicum];gi|970059553|ref|XP_015056522.1|//PREDICTED: putative disease resistance RPP13-like protein 1 isoform X1 [Solanum pennellii];gi|970059557|ref|XP_015056524.1|//PREDICTED: putative disease resistance RPP13-like protein 1 isoform X3 [Solanum pennellii]
Solyc03g019710.3.1	866	3.5663682186519	26.9182452922653	2.91605679824877	0.00224241461451753	Up	0.000541880645069225	GO:0005634//nucleus	GO:0003677//DNA binding;GO:0003700//transcription factor activity, sequence-specific DNA binding;GO:0046983//protein dimerization activity	GO:0006355//regulation of transcription, DNA-templated	K09264//MADS-box transcription factor, plant;K09260//MADS-box transcription enhancer factor 2A	gi|723684274|ref|XP_010317531.1|//PREDICTED: TDR8 protein isoform X2 [Solanum lycopersicum];gi|808175938|ref|NP_001234105.2|//MADS-box transcription factor TDR8 [Solanum lycopersicum]
Solyc04g056340.3.1	1265	365.480139260008	1468.74314722069	2.00671720524394	1.69683032305818e-06	Up	2.083405055969e-07	NA	GO:0016791//phosphatase activity	NA	K18045//tyrosine-protein phosphatase SIW14 [EC:3.1.3.48]	gi|460383339|ref|XP_004237383.1|//PREDICTED: probable tyrosine-protein phosphatase At1g05000 [Solanum lycopersicum]
Solyc11g072530.2.1	3020	593.314147869155	1329.03477656994	1.16351076570473	0.00627267312791524	Up	0.00172949765644808	GO:0016469//proton-transporting two-sector ATPase complex	GO:0015077//monovalent inorganic cation transmembrane transporter activity	GO:0015988//energy coupled proton transmembrane transport, against electrochemical gradient	K02154//V-type H+-transporting ATPase subunit a	gi|460411763|ref|XP_004251275.1|//PREDICTED: V-type proton ATPase subunit a1 [Solanum lycopersicum];gi|697105269|ref|XP_009606446.1|//PREDICTED: V-type proton ATPase subunit a1-like isoform X2 [Nicotiana tomentosiformis]
Solyc04g074400.1.1	930	1.09192115376966	27.1690224829595	4.63702206965394	1.79488761520441e-05	Up	2.6901905101897e-06	NA	NA	NA	K14299//nucleoporin SEH1	gi|460384461|ref|XP_004237930.1|//PREDICTED: protein EXORDIUM-like [Solanum lycopersicum]
Solyc01g103760.3.1	2188	1627.60211044537	245.145947789165	-2.73103523672092	1.30138002875489e-15	Down	3.90006539107997e-17	NA	NA	NA	NA	gi|460369228|ref|XP_004230465.1|//PREDICTED: probable magnesium transporter NIPA4 [Solanum lycopersicum]
Solyc08g079010.1.1	477	228.078795400036	47.2409238649264	-2.2714232406814	3.10929493868861e-05	Down	4.89434640155137e-06	NA	NA	NA	NA	gi|460400441|ref|XP_004245743.1|//PREDICTED: uncharacterized protein LOC101248807 [Solanum lycopersicum]
Solyc06g008510.3.1	2143	150.813550408345	26.9101261753799	-2.48654499819874	0.00495340318696069	Down	0.00132217534746629	NA	NA	NA	K10727//chromatin licensing and DNA replication factor 1	gi|723704264|ref|XP_010321830.1|//PREDICTED: CDT1-like protein a, chloroplastic [Solanum lycopersicum]
Solyc10g086220.2.1	1187	1616.07953451446	515.823865602923	-1.64754777242378	7.86409500433416e-05	Down	1.34224284422417e-05	GO:0044424//intracellular part	GO:0000166//nucleotide binding;GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	GO:0006633//fatty acid biosynthetic process	K05894//12-oxophytodienoic acid reductase [EC:1.3.1.42]	gi|350536879|ref|NP_001234781.1|//12-oxophytodienoate reductase 1 [Solanum lycopersicum]
Solyc11g006550.3.1	1726	607.461220528466	1419.13351185879	1.22414610716268	0.0067481403514283	Up	0.00187820053690604	GO:0005777//peroxisome	GO:0016663//oxidoreductase activity, acting on other nitrogenous compounds as donors, oxygen as acceptor;GO:0004846//urate oxidase activity	GO:0007031//peroxisome organization;GO:0009112//nucleobase metabolic process;GO:0019628//urate catabolic process;GO:0006144//purine nucleobase metabolic process;GO:0055114//oxidation-reduction process	K00365//urate oxidase [EC:1.7.3.3]	gi|350535699|ref|NP_001234208.1|//urate oxidase [Solanum lycopersicum]
Solyc06g008580.3.1	829	41.9071408128244	3.0372110277556	-3.78637703780099	1.12675417825457e-06	Down	1.33977405271808e-07	NA	NA	NA	K14484//auxin-responsive protein IAA	gi|525313557|ref|NP_001266082.1|//IAA22 [Solanum lycopersicum]
Solyc03g034400.3.1	1701	172.261846052446	63.7085456833021	-1.4350443875852	0.0148505510062168	Down	0.00457617061161452	NA	NA	NA	K03327//multidrug resistance protein, MATE family	gi|460377598|ref|XP_004234578.1|//PREDICTED: MATE efflux family protein 9-like [Solanum lycopersicum]
Solyc04g018063.1.1	1960	134.009957038456	10.7403617022683	-3.641225713194	7.81933926831208e-07	Down	8.93330656678714e-08	NA	GO:0005506//iron ion binding;GO:0016712//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen	GO:0008152//metabolic process	K20769;K13407//fatty acid omega-hydroxylase [EC:1.14.-.-]	gi|723729753|ref|XP_010326268.1|//PREDICTED: uncharacterized protein LOC104649220 [Solanum lycopersicum]
Solyc05g005070.2.1	2434	557.694487625473	1326.35503130314	1.24992008344305	0.00524617126689706	Up	0.00141059719827255	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460385908|ref|XP_004238642.1|//PREDICTED: cysteine-rich receptor-like protein kinase 2 isoform X1 [Solanum lycopersicum]
Solyc02g077430.3.1	1280	114.089955642146	625.450038908192	2.45472286229801	1.4609353554554e-06	Up	1.76980762830999e-07	NA	NA	NA	K00145//N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]	gi|723674942|ref|XP_004232942.2|//PREDICTED: phospholipase A1-IIgamma-like [Solanum lycopersicum]
Solyc00g009100.3.1	1868	2009.11249903204	483.947055236861	-2.05363722160383	7.08111160930852e-13	Down	3.08551493636561e-14	NA	NA	NA	K02945//small subunit ribosomal protein S1	gi|460415847|ref|XP_004253265.1|//PREDICTED: uncharacterized protein LOC101263198 [Solanum lycopersicum]
Solyc09g008060.3.1	1562	257.416390291838	791.02539939178	1.61962010340378	0.00303602690629019	Up	0.000762854382559347	NA	GO:0016757//transferase activity, transferring glycosyl groups	NA	K11820//N-hydroxythioamide S-beta-glucosyltransferase [EC:2.4.1.195];K13950//para-aminobenzoate synthetase [EC:2.6.1.85];K13691//pathogen-inducible salicylic acid glucosyltransferase [EC:2.4.1.-]	gi|460402279|ref|XP_004246641.1|//PREDICTED: UDP-glycosyltransferase 86A1-like [Solanum lycopersicum]
Solyc04g008330.1.1	1344	4132.72542048227	113.499876504489	-5.1863308809246	1.42094363433837e-10	Down	8.77099544678821e-12	NA	NA	NA	K13495//cis-zeatin O-glucosyltransferase [EC:2.4.1.215]	gi|460382366|ref|XP_004236910.1|//PREDICTED: zeatin O-glucosyltransferase-like [Solanum lycopersicum]
Solyc01g100630.2.1	3687	614.137628910953	148.294672683547	-2.05009522980183	2.69041177556271e-07	Down	2.81997834832352e-08	NA	GO:0004601//peroxidase activity;GO:0005488//binding;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process;GO:0050896//response to stimulus;GO:0009987//cellular process	K03781//catalase [EC:1.11.1.6]	gi|32526566|emb|CAD42908.1|//catalase [Prunus persica];gi|937575275|ref|NP_001303139.1|//catalase-2-like [Brassica napus];gi|970020249|ref|XP_015071350.1|//PREDICTED: catalase isozyme 3 [Solanum pennellii];gi|565347640|ref|XP_006340832.1|//PREDICTED: catalase isozyme 2 [Solanum tuberosum];gi|703135840|ref|XP_010105996.1|//Catalase isozyme 1 [Morus notabilis]
Solyc09g075830.3.1	5872	11533.9903231847	24557.1803406155	1.09025320262906	0.00451459582605704	Up	0.00119259507303065	NA	NA	NA	K03126//transcription initiation factor TFIID subunit 12;K14972//PAX-interacting protein 1	gi|723731169|ref|XP_010326554.1|//PREDICTED: protein TIME FOR COFFEE isoform X1 [Solanum lycopersicum];gi|723731175|ref|XP_010326556.1|//PREDICTED: protein TIME FOR COFFEE isoform X3 [Solanum lycopersicum];gi|723731178|ref|XP_010326557.1|//PREDICTED: protein TIME FOR COFFEE isoform X4 [Solanum lycopersicum]
Solyc02g090180.3.1	4279	141.123417362124	304.074016169918	1.10746513810745	0.00653823778508217	Up	0.0018110051058948	NA	GO:0004175//endopeptidase activity	GO:0019538//protein metabolic process	K01354//oligopeptidase B [EC:3.4.21.83]	gi|460375702|ref|XP_004233643.1|//PREDICTED: prolyl endopeptidase-like isoform X1 [Solanum lycopersicum];gi|723670495|ref|XP_010316165.1|//PREDICTED: prolyl endopeptidase-like isoform X2 [Solanum lycopersicum]
Solyc06g054490.3.1	1505	115.016911120837	506.072243058075	2.1374973493579	1.84433281525164e-05	Up	2.76979905794277e-06	NA	GO:0019842//vitamin binding;GO:0046914//transition metal ion binding;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K00472//prolyl 4-hydroxylase [EC:1.14.11.2]	gi|460390905|ref|XP_004241065.1|//PREDICTED: probable prolyl 4-hydroxylase 4 [Solanum lycopersicum]
Solyc08g081220.1.1	2128	759.437852904493	147.029421077077	-2.36882703742669	1.41340261763907e-05	Down	2.0688952137575e-06	NA	GO:0005506//iron ion binding;GO:0016712//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen	GO:0008152//metabolic process	K15398//fatty acid omega-hydroxylase [EC:1.14.-.-];K20544	gi|460400139|ref|XP_004245593.1|//PREDICTED: cytochrome P450 86A7 [Solanum lycopersicum];gi|697112473|ref|XP_009610115.1|//PREDICTED: cytochrome P450 86A7-like [Nicotiana tomentosiformis]
Solyc03g095950.3.1	5197	307.705956456821	144.782878734637	-1.08766136414865	0.00055644623154273	Down	0.000116116235666705	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial;K17426//large subunit ribosomal protein L45;K13944	gi|723683420|ref|XP_010318234.1|//PREDICTED: pentatricopeptide repeat-containing protein At2g40240, mitochondrial [Solanum lycopersicum];gi|460378965|ref|XP_004235237.1|//PREDICTED: LOB domain-containing protein 21 [Solanum lycopersicum]
Solyc06g083390.3.1	1199	1294.48194449296	6555.6593284519	2.34036604267387	4.94467453332836e-05	Up	8.07463065845816e-06	NA	NA	NA	K13456//RPM1-interacting protein 4	gi|460393626|ref|XP_004242410.1|//PREDICTED: RPM1-interacting protein 4 [Solanum lycopersicum]
Solyc08g061140.3.1	1535	1180.87357315409	528.86129898844	-1.15889320417314	9.36102445002379e-07	Down	1.08900243434189e-07	NA	NA	NA	NA	gi|460398996|ref|XP_004245032.1|//PREDICTED: uncharacterized protein LOC101262135 [Solanum lycopersicum]
Solyc07g017520.3.1	3567	624.874671518668	1345.24408915519	1.10622919914161	0.0471257748617939	Up	0.0174657663430303	NA	NA	NA	K20290//conserved oligomeric Golgi complex subunit 3	gi|723690027|ref|XP_010319364.1|//PREDICTED: conserved oligomeric Golgi complex subunit 3 isoform X1 [Solanum lycopersicum];gi|970025220|ref|XP_015073924.1|//PREDICTED: conserved oligomeric Golgi complex subunit 3 isoform X2 [Solanum pennellii];gi|565355356|ref|XP_006344557.1|//PREDICTED: conserved oligomeric Golgi complex subunit 3 [Solanum tuberosum];gi|970025218|ref|XP_015073923.1|//PREDICTED: conserved oligomeric Golgi complex subunit 3 isoform X1 [Solanum pennellii];gi|113205290|gb|ABI34329.1|//Integrase core domain containing protein [Solanum demissum]
Solyc05g055740.3.1	2594	449.487118403921	15.1994974243792	-4.88618424449793	1.19529652964345e-17	Down	2.85146033611082e-19	NA	NA	NA	K18045//tyrosine-protein phosphatase SIW14 [EC:3.1.3.48]	gi|460388078|ref|XP_004239698.1|//PREDICTED: probable tyrosine-protein phosphatase At1g05000 [Solanum lycopersicum]
Solyc01g103490.3.1	3667	803.947728918158	2307.20435845692	1.52097218663251	0.00193222035840936	Up	0.000460151925968295	NA	NA	NA	K01183//chitinase [EC:3.2.1.14];K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460369194|ref|XP_004230448.1|//PREDICTED: MACPF domain-containing protein At4g24290 [Solanum lycopersicum]
Solyc07g017680.2.1	1556	91.0688408863623	25.4339848650753	-1.84020000804825	9.62943292109586e-06	Down	1.36545276980937e-06	NA	NA	NA	K14157//alpha-aminoadipic semialdehyde synthase [EC:1.5.1.8 1.5.1.9]	gi|969998662|ref|XP_015075926.1|//PREDICTED: uncharacterized protein LOC107020122 [Solanum pennellii];gi|970039813|ref|XP_015081251.1|//PREDICTED: alpha-aminoadipic semialdehyde synthase-like [Solanum pennellii]
Solyc11g011610.2.1	906	276.148661209519	1838.0917698394	2.73469175917501	4.11986240255797e-11	Up	2.34802058055432e-12	NA	NA	GO:0051234//establishment of localization	NA	gi|460409576|ref|XP_004250214.1|//PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 [Solanum lycopersicum]
Solyc05g014150.3.1	1266	6.96397979389726	0.388739810114619	-4.16303525294376	0.00958047726114912	Down	0.00278793745257907	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K10251//17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase [EC:1.1.1.62 1.1.1.330]	gi|723699057|ref|XP_010320962.1|//PREDICTED: very-long-chain 3-oxoacyl-CoA reductase 1 isoform X2 [Solanum lycopersicum]
Solyc06g053585.1.1	2104	3028.16908767936	687.687103028985	-2.13862157067331	5.196541469954e-10	Down	3.52724840345394e-11	NA	GO:0004033//aldo-keto reductase (NADP) activity	GO:0008152//metabolic process	K14521//N-acetyltransferase 10 [EC:2.3.1.-];K15303//aflatoxin B1 aldehyde reductase;K05275//pyridoxine 4-dehydrogenase [EC:1.1.1.65];K09338//homeobox-leucine zipper protein	gi|460390793|ref|XP_004241009.1|//PREDICTED: aldo-keto reductase [Solanum lycopersicum]
Solyc07g062650.3.1	1516	12156.1567663479	4717.96741202313	-1.36544982642202	0.00133175034975626	Down	0.000304245485822876	NA	GO:0016615//malate dehydrogenase activity;GO:0030060//L-malate dehydrogenase activity	GO:0006099//tricarboxylic acid cycle;GO:0043648//dicarboxylic acid metabolic process;GO:0005975//carbohydrate metabolic process;GO:0009060//aerobic respiration;GO:0006108//malate metabolic process	K00026//malate dehydrogenase [EC:1.1.1.37]	gi|255566555|ref|XP_002524262.1|//PREDICTED: malate dehydrogenase, mitochondrial [Ricinus communis];gi|927442679|ref|NP_001234001.2|//mitochondrial malate dehydrogenase [Solanum lycopersicum]
Solyc02g089110.3.1	1604	785.397895105175	3157.39644598363	2.00723978166791	2.72857396416902e-16	Up	7.59745322511652e-18	NA	NA	NA	K15121//solute carrier family 25, member 44	gi|460372654|ref|XP_004232143.1|//PREDICTED: solute carrier family 25 member 44 [Solanum lycopersicum]
Solyc01g005865.1.1	3187	1218.0019870513	3587.76899333682	1.55857051518523	0.0363848503645362	Up	0.0128599516963168	NA	NA	NA	K13466//EIX receptor 1/2;K19613//leucine-rich repeat protein SHOC2;K13023//carboxypeptidase N regulatory subunit;K13465;K10406//kinesin family member C2/C3;K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|460365469|ref|XP_004228624.1|//PREDICTED: receptor-like protein 12 [Solanum lycopersicum]
Solyc04g005600.2.1	1332	109.313231642603	4.05293828128135	-4.7533560240451	7.82388863203304e-05	Down	1.33450553079556e-05	NA	NA	NA	K09422//myb proto-oncogene protein, plant	gi|565354867|ref|XP_006344330.1|//PREDICTED: transcription factor MYB51-like [Solanum tuberosum];gi|723690620|ref|XP_010319449.1|//PREDICTED: transcription factor MYB108-like [Solanum lycopersicum]
Solyc07g055200.3.1	1572	1444.61962815251	566.303218885672	-1.35104304234152	0.00150696725416335	Down	0.000349105467594498	NA	NA	NA	K14502//protein brassinosteroid insensitive 2 [EC:2.7.11.1]	gi|460395408|ref|XP_004243275.1|//PREDICTED: shaggy-related protein kinase eta-like [Solanum lycopersicum]
Solyc09g013100.3.1	2066	1117.99516676876	279.950737045075	-1.99766906779717	0.000283690874365129	Down	5.5128886864654e-05	NA	NA	NA	NA	gi|460401684|ref|XP_004246347.1|//PREDICTED: uncharacterized protein LOC101255724 [Solanum lycopersicum]
Solyc03g117960.3.1	4153	140.648625508652	793.325918678684	2.49581822995822	6.01433483959777e-07	Up	6.72319598328377e-08	NA	NA	NA	K10862//tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]	gi|723688373|ref|XP_010319088.1|//PREDICTED: uncharacterized protein LOC101248663 [Solanum lycopersicum]
Solyc03g046450.3.1	6966	1365.39162806634	509.527370485835	-1.42208325968376	0.000515656148932153	Down	0.000106502561548869	NA	NA	NA	NA	gi|460377853|ref|XP_004234701.1|//PREDICTED: protein furry homolog-like [Solanum lycopersicum]
Solyc04g077835.1.1	591	11.3517477155091	40.4282134241079	1.83244801842826	0.0048211545931782	Up	0.00128279007205895	NA	NA	NA	NA	gi|460384789|ref|XP_004238091.1|//PREDICTED: F-box/kelch-repeat protein At5g43190 [Solanum lycopersicum]
Solyc02g071880.3.1	2850	428.260210845646	194.316296065162	-1.14008074874521	0.0155043327931019	Down	0.0048036385185725	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|723675350|ref|XP_010316862.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase RFK1 isoform X1 [Solanum lycopersicum];gi|723675353|ref|XP_010316863.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase RFK1 isoform X2 [Solanum lycopersicum]
Solyc10g047470.1.1	279	27.3048837409516	6.62833259392523	-2.04244111361618	0.00419424818202222	Down	0.00109855447656077	GO:0009534//chloroplast thylakoid	GO:0000166//nucleotide binding;GO:0048037//cofactor binding;GO:0016491//oxidoreductase activity	GO:0006091//generation of precursor metabolites and energy;GO:0051234//establishment of localization	K05579//NAD(P)H-quinone oxidoreductase subunit H [EC:1.6.5.3]	gi|108773185|ref|YP_635695.1|//NADH dehydrogenase subunit 7 [Solanum tuberosum]
Solyc09g055940.3.1	1972	985.205918234032	250.908651625694	-1.9732630768533	5.51222912876076e-08	Down	5.12636487112647e-09	NA	NA	NA	K03453//bile acid:Na+ symporter, BASS family	gi|460403073|ref|XP_004247027.1|//PREDICTED: probable sodium/metabolite cotransporter BASS3, chloroplastic [Solanum lycopersicum]
Solyc06g075390.3.1	1740	550.992336857116	1139.82605198126	1.0487095133557	6.06266818782493e-06	Up	8.25515390268543e-07	GO:0000178//exosome (RNase complex)	GO:0008408//3'-5' exonuclease activity;GO:0003676//nucleic acid binding	GO:0006396//RNA processing;GO:0006401//RNA catabolic process;GO:0010467//gene expression	K12586//exosome complex component RRP43	gi|970032079|ref|XP_015077338.1|//PREDICTED: exosome complex component RRP43-like [Solanum pennellii]
Solyc03g116030.3.1	1404	318.803268824098	2712.22153730842	3.08873669716591	8.43937410932959e-18	Up	1.97866643609971e-19	NA	NA	NA	K10661//E3 ubiquitin-protein ligase MARCH6 [EC:2.3.2.27]	gi|460380488|ref|XP_004235988.1|//PREDICTED: uncharacterized protein LOC101260808 [Solanum lycopersicum]
Solyc07g063620.3.1	1366	179.547775698343	2612.92772754932	3.86322753528201	7.75464747938191e-22	Up	1.19377866743131e-23	NA	NA	NA	NA	gi|460397256|ref|XP_004244184.1|//PREDICTED: uncharacterized protein LOC101267253 [Solanum lycopersicum]
Solyc06g069697.1.1	4588	470.522537278225	3231.20681394344	2.77973736099048	1.40933066258237e-10	Up	8.69405936549061e-12	NA	NA	NA	K12127//pseudo-response regulator 1	gi|460393152|ref|XP_004242175.1|//PREDICTED: two-component response regulator-like APRR1 isoform X1 [Solanum lycopersicum];gi|723708628|ref|XP_010322571.1|//PREDICTED: two-component response regulator-like APRR1 isoform X2 [Solanum lycopersicum];gi|460393154|ref|XP_004242176.1|//PREDICTED: uncharacterized protein LOC101259449 [Solanum lycopersicum]
Solyc02g069310.3.1	4767	802.777834659729	4659.18601209963	2.53700524097298	1.99380365072626e-12	Up	9.27893648206882e-14	NA	NA	NA	K14508//regulatory protein NPR1	gi|350537713|ref|NP_001234562.1|//NIM1-like protein 1 [Solanum lycopersicum]
Solyc05g053950.3.1	2784	1047.94275358851	221.871233153961	-2.239765377023	3.61892990811702e-10	Down	2.39706219126433e-11	GO:0016021//integral component of membrane	NA	NA	K15015//solute carrier family 32 (vesicular inhibitory amino acid transporter)	gi|723701641|ref|XP_010321399.1|//PREDICTED: putative late blight resistance protein homolog R1A-3 isoform X1 [Solanum lycopersicum];gi|971586836|ref|XP_015160906.1|//PREDICTED: LOW QUALITY PROTEIN: amino acid transporter ANT1-like [Solanum tuberosum];gi|460388360|ref|XP_004239835.1|//PREDICTED: uncharacterized protein LOC101252086 [Solanum lycopersicum];gi|970029381|ref|XP_015076020.1|//PREDICTED: uncharacterized protein LOC107020249 isoform X2 [Solanum pennellii]
Solyc01g005160.3.1	1281	2.01406059478656	225.025287181991	6.80383623421163	1.26760525076285e-16	Up	3.40667729909057e-18	GO:0043234//protein complex	GO:0019787//ubiquitin-like protein transferase activity	GO:0032446//protein modification by small protein conjugation	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K08332//vacuolar protein 8	gi|350536307|ref|NP_001234240.1|//Avr9/Cf-9 rapidly elicited protein [Solanum lycopersicum]
Solyc01g096870.3.1	2000	9091.36560275884	2352.66222865622	-1.95020280819972	1.33595220997539e-17	Down	3.22186178564961e-19	GO:0044424//intracellular part	GO:0032559//adenyl ribonucleotide binding;GO:0004812//aminoacyl-tRNA ligase activity	GO:0006418//tRNA aminoacylation for protein translation	K01881//prolyl-tRNA synthetase [EC:6.1.1.15]	gi|460368412|ref|XP_004230061.1|//PREDICTED: proline--tRNA ligase [Solanum lycopersicum]
Solyc05g054650.1.1	459	7.18196216738104	136.178377344159	4.24497578421096	5.72698128481554e-11	Up	3.3386755365482e-12	NA	NA	NA	K14841//ribosome biogenesis protein NSA1	gi|460388238|ref|XP_004239776.1|//PREDICTED: zinc finger protein ZAT11-like [Solanum lycopersicum]
Solyc10g085280.1.1	1428	270.888575535934	24.0795707739722	-3.49181796961254	7.48227465790499e-08	Down	7.15094387314313e-09	NA	NA	NA	K04628//2-hydroxyacylsphingosine 1-beta-galactosyltransferase [EC:2.4.1.45];K13493//cytokinin-N-glucosyltransferase [EC:2.4.1.-];K00699//glucuronosyltransferase [EC:2.4.1.17]	gi|723739608|ref|XP_004249643.2|//PREDICTED: UDP-glucose iridoid glucosyltransferase-like [Solanum lycopersicum]
Solyc09g089890.1.1	1050	12.8973133579823	1.10570261616474	-3.54403524549446	0.00611222608828964	Down	0.00167910788246215	NA	NA	NA	K19041//E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27]	gi|460404499|ref|XP_004247719.1|//PREDICTED: RING-H2 finger protein ATL16 [Solanum lycopersicum]
Solyc12g098850.2.1	1431	6854.43836571453	1799.63124084567	-1.92933714345755	6.96395278051057e-05	Down	1.17536820449351e-05	NA	NA	NA	NA	gi|460415223|ref|XP_004252959.1|//PREDICTED: UPF0396 protein CG6066 [Solanum lycopersicum]
Solyc01g110670.3.1	1137	56.8448604404402	13.8567441555506	-2.0364416004607	0.0117139791101399	Down	0.00348913102240675	NA	NA	NA	K14488//SAUR family protein	gi|723666146|ref|XP_010315346.1|//PREDICTED: auxin-induced protein 15A-like [Solanum lycopersicum]
Solyc05g007850.2.1	4367	401.618511863302	189.060079734862	-1.08698100054713	0.000730267569172058	Down	0.000156789220159201	GO:0044425//membrane part	GO:0043531//ADP binding;GO:0032559//adenyl ribonucleotide binding;GO:0004872//receptor activity	GO:0007165//signal transduction;GO:0012501//programmed cell death;GO:0006952//defense response;GO:0023052//signaling;GO:0042742//defense response to bacterium	K03283//heat shock 70kDa protein 1/8;K15032//mTERF domain-containing protein, mitochondrial;K19613//leucine-rich repeat protein SHOC2	gi|723697517|ref|XP_010320695.1|//PREDICTED: TMV resistance protein N-like isoform X1 [Solanum lycopersicum];gi|723697523|ref|XP_010320698.1|//PREDICTED: TMV resistance protein N-like isoform X3 [Solanum lycopersicum]
Solyc01g080760.3.1	4641	829.576075789921	372.359341630831	-1.15567873688346	0.00355416739137764	Down	0.000912520687036276	NA	NA	NA	K10532//heparan-alpha-glucosaminide N-acetyltransferase [EC:2.3.1.78]	gi|723659059|ref|XP_010323062.1|//PREDICTED: uncharacterized protein LOC101248421 isoform X1 [Solanum lycopersicum];gi|723659065|ref|XP_010323067.1|//PREDICTED: uncharacterized protein LOC101248421 isoform X3 [Solanum lycopersicum]
Solyc08g022240.1.1	1449	18.4293314979951	96.7652375232985	2.39248511898606	2.14625065895228e-05	Up	3.27601626972177e-06	NA	NA	NA	K16818//phospholipase A1 [EC:3.1.1.32]	gi|460398633|ref|XP_004244860.1|//PREDICTED: phospholipase A1-Igamma1, chloroplastic [Solanum lycopersicum]
Solyc08g006260.2.1	2737	251.352057918408	73.2624849527257	-1.77856295997118	0.000399266280099271	Down	8.03058319809168e-05	NA	NA	NA	NA	gi|723719577|ref|XP_010324528.1|//PREDICTED: B3 domain-containing protein REM14 isoform X2 [Solanum lycopersicum]
Solyc06g083680.3.1	762	10243.901847541	1942.16359177777	-2.39902870318824	7.02193187478636e-08	Down	6.67695997188758e-09	GO:0009522//photosystem I;GO:0009507//chloroplast	NA	NA	K02693//photosystem I subunit IV	gi|460393564|ref|XP_004242379.1|//PREDICTED: photosystem I reaction center subunit IV A, chloroplastic [Solanum lycopersicum]
Solyc09g008430.3.1	1590	172.49027182777	22.6461172438111	-2.92917937705479	1.67750113446271e-07	Down	1.70138682975735e-08	NA	GO:0046914//transition metal ion binding;GO:0008270//zinc ion binding	NA	K10144//RING finger and CHY zinc finger domain-containing protein 1 [EC:2.3.2.27]	gi|565375765|ref|XP_006354386.1|//PREDICTED: E3 ubiquitin-protein ligase MIEL1 isoform X1 [Solanum tuberosum];gi|697136060|ref|XP_009622097.1|//PREDICTED: RING finger and CHY zinc finger domain-containing protein 1 isoform X1 [Nicotiana tomentosiformis];gi|460402212|ref|XP_004246608.1|//PREDICTED: RING finger and CHY zinc finger domain-containing protein 1 [Solanum lycopersicum]
Solyc03g113930.2.1	543	73.0828177261457	0.543104080905846	-7.07215974450597	3.06535698563456e-08	Down	2.7159510790418e-09	NA	NA	NA	K13993//HSP20 family protein	gi|460380798|ref|XP_004236141.1|//PREDICTED: 22.7 kDa class IV heat shock protein-like [Solanum lycopersicum]
Solyc01g065530.3.1	2764	1662.54049571854	4886.63318273308	1.5554513302886	9.35990786903861e-06	Up	1.32367267239945e-06	NA	NA	NA	K10956//protein transport protein SEC61 subunit alpha	gi|970001999|ref|XP_015060324.1|//PREDICTED: COBRA-like protein 7 [Solanum pennellii]
Solyc12g099790.2.1	2860	76.7747541057465	19.863382956473	-1.9505206356362	0.0290038039770885	Down	0.00990042049909062	NA	GO:0046872//metal ion binding;GO:0004674//protein serine/threonine kinase activity;GO:0032559//adenyl ribonucleotide binding	GO:0006464//cellular protein modification process	K13412//calcium-dependent protein kinase [EC:2.7.11.1]	gi|460415075|ref|XP_004252886.1|//PREDICTED: calcium-dependent protein kinase 17-like isoform X1 [Solanum lycopersicum]
Solyc12g098920.2.1	2231	1225.59365969447	299.038208878245	-2.03507900081306	5.9215966355959e-06	Down	8.03657870516054e-07	NA	GO:0046872//metal ion binding	GO:0006163//purine nucleotide metabolic process	K13448//calcium-binding protein CML;K01148//poly(A)-specific ribonuclease [EC:3.1.13.4]	gi|723753033|ref|XP_010314730.1|//PREDICTED: probable GTP diphosphokinase CRSH, chloroplastic [Solanum lycopersicum]
Solyc03g113950.3.1	1831	121.899242189694	799.859193333918	2.71405689411002	8.84855644294379e-07	Up	1.02410793780157e-07	NA	NA	NA	NA	gi|460380794|ref|XP_004236139.1|//PREDICTED: uncharacterized protein LOC101255677 isoform X1 [Solanum lycopersicum]
Solyc12g013690.2.1	1618	221.040729001774	2851.63199909837	3.68940368466239	1.01955037540303e-08	Up	8.41011249726739e-10	NA	NA	NA	K00480//salicylate hydroxylase [EC:1.14.13.1];K09838//zeaxanthin epoxidase [EC:1.14.13.90]	gi|460412932|ref|XP_004251850.1|//PREDICTED: zeaxanthin epoxidase, chloroplastic-like [Solanum lycopersicum]
Solyc04g072375.1.1	504	56.5525820807944	600.357223923862	3.40815638562119	4.31155616123672e-14	Up	1.59746787843645e-15	NA	NA	NA	K16282//E3 ubiquitin-protein ligase RHA2 [EC:2.3.2.27]	gi|698479838|ref|XP_009786990.1|//PREDICTED: RING-H2 finger protein ATL11-like [Nicotiana sylvestris]
Solyc01g087870.3.1	2813	131.781951201411	496.866615841082	1.91470581836993	0.00142471847724474	Up	0.000327608777624973	GO:0044424//intracellular part	GO:0030246//carbohydrate binding;GO:0008483//transaminase activity	GO:0005975//carbohydrate metabolic process	K00820//glucosamine--fructose-6-phosphate aminotransferase (isomerizing) [EC:2.6.1.16]	gi|460367614|ref|XP_004229667.1|//PREDICTED: glutamine--fructose-6-phosphate aminotransferase [isomerizing] 2 [Solanum lycopersicum]
Solyc12g006470.2.1	1743	13475.1414595723	1897.21981909442	-2.8283416685325	7.74686076201614e-05	Down	1.31876819368301e-05	GO:0005737//cytoplasm	GO:0042802//identical protein binding;GO:0008483//transaminase activity;GO:0048037//cofactor binding;GO:0003867//4-aminobutyrate transaminase activity;GO:0030170//pyridoxal phosphate binding	GO:0009448//gamma-aminobutyric acid metabolic process	K16871//4-aminobutyrate---pyruvate transaminase [EC:2.6.1.96]	gi|19171207|emb|CAD12664.1|//viroid RNA-binding protein [Solanum lycopersicum]
Solyc10g005460.3.1	1415	4.60018156625418	54.0414571082996	3.55430386460119	1.59021619793045e-06	Up	1.94420349232588e-07	NA	NA	NA	K09422//myb proto-oncogene protein, plant	gi|460405794|ref|XP_004248359.1|//PREDICTED: transcription factor MYB3-like [Solanum lycopersicum]
Solyc10g076790.2.1	2331	257.415658381473	95.575491180937	-1.42938719969277	0.017723940111248	Down	0.00559769437015819	GO:0031224//intrinsic component of membrane;GO:0016021//integral component of membrane;GO:0005886//plasma membrane	GO:0015171//amino acid transmembrane transporter activity	GO:0003333//amino acid transmembrane transport	K13946//auxin influx carrier (AUX1 LAX family)	gi|350539539|ref|NP_001234688.1|//LAX4 protein [Solanum lycopersicum]
Solyc11g040260.2.1	2774	448.602998559055	173.347163131559	-1.37177503706169	2.13179862221598e-05	Down	3.25077835227583e-06	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial;K17710//pentatricopeptide repeat domain-containing protein 1	gi|698444194|ref|XP_009765803.1|//PREDICTED: pentatricopeptide repeat-containing protein At1g10910, chloroplastic isoform X2 [Nicotiana sylvestris];gi|970063493|ref|XP_015058679.1|//PREDICTED: pentatricopeptide repeat-containing protein At1g10910, chloroplastic isoform X2 [Solanum pennellii];gi|460410580|ref|XP_004250704.1|//PREDICTED: pentatricopeptide repeat-containing protein At1g10910, chloroplastic isoform X1 [Solanum lycopersicum]
Solyc05g007680.1.1	1320	514.671310556656	129.526604059608	-1.99040291424055	1.62741235280268e-05	Down	2.41551960222912e-06	NA	NA	NA	K09422//myb proto-oncogene protein, plant;K01369//legumain [EC:3.4.22.34]	gi|460387452|ref|XP_004239391.1|//PREDICTED: uncharacterized protein LOC101262417 [Solanum lycopersicum]
Solyc01g108900.3.1	2336	98.9752301383102	10.4322204704408	-3.246021252477	9.19316341061769e-06	Down	1.29940642809983e-06	NA	NA	NA	K02984//small subunit ribosomal protein S3Ae;K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|460369973|ref|XP_004230831.1|//PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 [Solanum lycopersicum]
Solyc01g091530.3.1	1065	1631.70123121402	193.740116790277	-3.07418229865226	0.000652333413018262	Down	0.00013837891208763	NA	NA	NA	K19519//transforming growth factor-beta-induced protein	gi|460367940|ref|XP_004229828.1|//PREDICTED: fasciclin-like arabinogalactan protein 10 [Solanum lycopersicum]
Solyc01g067070.3.1	1957	692.347786187335	3177.008299381	2.19810002661539	1.37121330620664e-10	Up	8.43847162869826e-12	GO:0031224//intrinsic component of membrane;GO:0019866//organelle inner membrane	NA	GO:0006810//transport	K15108//solute carrier family 25 (mitochondrial thiamine pyrophosphate transporter), member 19	gi|460366721|ref|XP_004229228.1|//PREDICTED: mitochondrial thiamine pyrophosphate carrier-like [Solanum lycopersicum]
Solyc03g093240.3.1	1984	1735.1899720968	806.772921402197	-1.10485905348047	2.90138233174464e-05	Down	4.53462655322993e-06	NA	NA	NA	K13427//nitric-oxide synthase, plant [EC:1.14.13.39]	gi|460378818|ref|XP_004235165.1|//PREDICTED: putative nitric oxide synthase [Solanum lycopersicum]
Solyc07g066460.3.1	1164	1742.09097458191	359.34782001271	-2.27736712651101	2.38831795921897e-06	Down	3.01522026534765e-07	NA	NA	NA	NA	gi|460396850|ref|XP_004243983.1|//PREDICTED: protein Iojap, chloroplastic [Solanum lycopersicum]
Solyc08g082240.1.1	282	46.7146902364136	177.870452412072	1.92887866542718	0.00024288237339324	Up	4.64651780589212e-05	NA	NA	NA	NA	gi|460399990|ref|XP_004245519.1|//PREDICTED: uncharacterized protein LOC101257691 [Solanum lycopersicum]
Solyc06g072430.2.1	897	164.753541570907	638.304187912489	1.95393463535275	0.000770705984792047	Up	0.000166677953025326	NA	NA	NA	K01555//fumarylacetoacetase [EC:3.7.1.2]	gi|723710854|ref|XP_010322968.1|//PREDICTED: uncharacterized protein LOC104648101 [Solanum lycopersicum]
Solyc02g089540.3.1	2226	830.032397430011	345.584934732101	-1.26412732144583	0.0292482886924631	Down	0.00999182070472732	NA	NA	NA	K12135//zinc finger protein CONSTANS	gi|350538605|ref|NP_001233839.1|//CONSTANS 1 [Solanum lycopersicum]
Solyc06g051920.3.1	7461	463.893847391284	1484.56903156371	1.67817756232195	2.22462323397987e-05	Up	3.40393558054547e-06	GO:0031224//intrinsic component of membrane;GO:0016021//integral component of membrane	GO:0005216//ion channel activity;GO:0015075//ion transmembrane transporter activity	GO:0006810//transport;GO:0034220//ion transmembrane transport	K05391//cyclic nucleotide gated channel, other eukaryote	gi|748983152|ref|NP_001291303.1|//cyclic nucleotide-gated ion channel 1-like [Solanum lycopersicum]
Solyc11g069220.2.1	1137	9.62437143533082	178.683609087263	4.21457116785318	1.60854920757575e-11	Up	8.53200209624382e-13	NA	NA	NA	K08472//mlo protein	gi|723745749|ref|XP_010313404.1|//PREDICTED: LOW QUALITY PROTEIN: MLO-like protein 6 [Solanum lycopersicum]
Solyc04g071860.3.1	1572	928.209105450259	1928.45018395964	1.05492012342226	0.0151027371537336	Up	0.0046651402561872	NA	NA	NA	K16675//palmitoyltransferase ZDHHC9/14/18 [EC:2.3.1.225]	gi|723693981|ref|XP_010320113.1|//PREDICTED: protein S-acyltransferase 8 [Solanum lycopersicum]
Solyc01g099120.3.1	2080	233.491701446782	61.9889135498016	-1.91328915198133	0.0230863416113074	Down	0.00760795982501747	NA	NA	NA	NA	gi|460368700|ref|XP_004230203.1|//PREDICTED: protein AUXIN RESPONSE 4 [Solanum lycopersicum]
Solyc06g035600.3.1	2343	41.2902185987261	13.8915894551387	-1.57158837665375	0.0247840603921243	Down	0.00825752197065146	NA	NA	NA	K15271//ATP-dependent DNA helicase HFM1/MER3 [EC:3.6.4.12];K19589//release factor glutamine methyltransferase [EC:2.1.1.297]	gi|460390346|ref|XP_004240796.1|//PREDICTED: pentatricopeptide repeat-containing protein At2g22410, mitochondrial-like [Solanum lycopersicum]
Solyc06g010170.3.1	1591	215.487466514751	30.4093005981286	-2.82501941924724	2.03012218702502e-09	Down	1.5081383326155e-10	GO:0016021//integral component of membrane	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K03252//translation initiation factor 3 subunit C;K19995//secretory carrier-associated membrane protein	gi|723704584|ref|XP_010321885.1|//PREDICTED: uncharacterized protein LOC101246434 isoform X2 [Solanum lycopersicum];gi|723704577|ref|XP_010321883.1|//PREDICTED: uncharacterized protein LOC101246434 isoform X1 [Solanum lycopersicum]
Solyc01g008690.3.1	1868	6.2215016138491	403.962697593543	6.02081543923387	3.14973495056595e-14	Up	1.14234833267507e-15	NA	NA	NA	K15356//GDP-mannose transporter	gi|460365231|ref|XP_004228507.1|//PREDICTED: GDP-mannose transporter GONST1-like isoform X2 [Solanum lycopersicum];gi|723655239|ref|XP_010314777.1|//PREDICTED: GDP-mannose transporter GONST1-like isoform X1 [Solanum lycopersicum]
Solyc04g077350.1.1	267	40.1671932118609	5.00657031146512	-3.00412310614989	0.0159805984739795	Down	0.00497025919438216	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723694995|ref|XP_004238059.2|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 isoform X2 [Solanum lycopersicum]
Solyc10g008740.3.1	1820	13988.016198444	2436.58976146695	-2.52125609579624	5.24227948973836e-11	Down	3.03461310852977e-12	GO:0009532//plastid stroma	GO:0051003//ligase activity, forming nitrogen-metal bonds, forming coordination complexes;GO:0032559//adenyl ribonucleotide binding;GO:0016462//pyrophosphatase activity	GO:0006779//porphyrin-containing compound biosynthetic process	K03405//magnesium chelatase subunit I [EC:6.6.1.1]	gi|460405350|ref|XP_004248139.1|//PREDICTED: magnesium-chelatase subunit ChlI, chloroplastic [Solanum lycopersicum]
Solyc10g008340.3.1	2186	1429.55480896229	4064.19412805037	1.50740338094322	0.00278936233221244	Up	0.000694013477244597	NA	NA	NA	K10896//fanconi anemia group M protein;K16903//L-tryptophan---pyruvate aminotransferase [EC:2.6.1.99]	gi|460405407|ref|XP_004248167.1|//PREDICTED: bromodomain-containing protein 4 [Solanum lycopersicum]
Solyc01g073880.2.1	609	7.39874792540253	91.3089896611771	3.62540385287568	1.21725776899483e-07	Up	1.20419044241549e-08	NA	NA	NA	K17609//nucleoredoxin [EC:1.8.1.8];K16219//protein N-terminal methyltransferase [EC:2.1.1.244];K20393//PRA1 family protein 3	gi|723659482|ref|XP_010322098.1|//PREDICTED: uncharacterized protein LOC104647934 [Solanum lycopersicum]
Solyc06g052050.3.1	2379	8.62705826388628	71.2575684315523	3.04610264974858	1.3708049592729e-06	Up	1.65193545300779e-07	GO:0005788//endoplasmic reticulum lumen;GO:0044432//endoplasmic reticulum part	GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	GO:0008152//metabolic process;GO:0050896//response to stimulus	K09490//heat shock 70kDa protein 5	gi|970033399|ref|XP_015078003.1|//PREDICTED: luminal-binding protein 4-like [Solanum pennellii]
Solyc10g008250.2.1	2363	38.787957803159	224.853402729875	2.53530399194231	9.04558695176879e-08	Up	8.76303879813892e-09	NA	NA	NA	NA	gi|460406025|ref|XP_004248474.1|//PREDICTED: uncharacterized protein LOC101259680 [Solanum lycopersicum]
Solyc00g006805.1.1	2756	269.924684573776	37.640190116284	-2.84221109700814	4.20285647049207e-10	Down	2.80890176367686e-11	GO:0044424//intracellular part	GO:0016744//transferase activity, transferring aldehyde or ketonic groups	GO:0006007//glucose catabolic process	K00616//transaldolase [EC:2.2.1.2]	gi|10441272|gb|AAG16981.1|AF184164_1//transaldolase [Solanum lycopersicum]
Solyc10g085010.2.1	1011	687.890893737897	14266.4777408781	4.37430562327143	1.07317483454239e-08	Up	8.91245538750726e-10	NA	NA	NA	NA	gi|460408240|ref|XP_004249554.1|//PREDICTED: uncharacterized protein LOC101267755 [Solanum lycopersicum]
Solyc10g005030.3.1	2579	965.06000932081	102.127231854682	-3.24025104787739	1.10284159661287e-28	Down	8.67375789791693e-31	NA	NA	NA	K12130//pseudo-response regulator 5	gi|460405918|ref|XP_004248421.1|//PREDICTED: two-component response regulator-like APRR5 isoform X1 [Solanum lycopersicum]
Solyc04g054880.3.1	3162	279.602359718227	91.2880814612193	-1.6148781165862	0.0156566432410141	Down	0.00486016568179386	NA	NA	NA	NA	gi|460383398|ref|XP_004237412.1|//PREDICTED: uncharacterized protein LOC101265534 [Solanum lycopersicum]
Solyc09g074780.3.1	1948	7.69565272313885	55.0015171728777	2.8373558126741	0.0062329242885875	Up	0.00171665652091393	NA	NA	NA	K14794//ribosomal RNA-processing protein 12;K12309//beta-galactosidase [EC:3.2.1.23]	gi|460404138|ref|XP_004247541.1|//PREDICTED: zinc finger protein NUTCRACKER-like [Solanum lycopersicum]
Solyc12g038650.1.1	6407	122.815350355493	319.025935855185	1.37718282505929	1.52862519089647e-05	Up	2.25898200690032e-06	NA	NA	NA	K06883//uncharacterized protein;K03469//ribonuclease HI [EC:3.1.26.4]	gi|723656335|ref|XP_010317293.1|//PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101258094 [Solanum lycopersicum]
Solyc02g081440.3.1	3954	174.323235619984	645.435166512966	1.88850730542562	0.000320062864265902	Up	6.29913494604131e-05	NA	NA	NA	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|460375970|ref|XP_004233775.1|//PREDICTED: serine/arginine repetitive matrix protein 3-like [Solanum lycopersicum]
Solyc06g051190.2.1	3427	70.2143015471418	193.282783939494	1.46087631988911	0.00483990512807829	Up	0.00128935447854389	NA	NA	NA	K11699//RNA-dependent RNA polymerase [EC:2.7.7.48]	gi|723706111|ref|XP_010322170.1|//PREDICTED: probable RNA-dependent RNA polymerase 3 [Solanum lycopersicum]
BGI_novel_G000516	2889	59.1383473701324	167.715768898514	1.50385250691241	0.0171150951462065	Up	0.00536967928453929	NA	NA	NA	K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6];K03549//KUP system potassium uptake protein	gi|545693870|gb|AGW47867.1|//polyprotein [Phaseolus vulgaris]
Solyc00g227860.1.1	1413	1044.03839893919	175.125499896924	-2.57571370015387	1.054474178368e-06	Down	1.24557502282995e-07	NA	GO:0016758//transferase activity, transferring hexosyl groups	NA	K18823//soyasaponin III rhamnosyltransferase [EC:2.4.1.273]	gi|723754839|ref|XP_004253507.2|//PREDICTED: UDP-glycosyltransferase 91A1-like [Solanum lycopersicum]
Solyc11g007650.1.1	1017	27.620110603686	163.87413277255	2.56879714373853	1.9005830275187e-05	Up	2.86490150711407e-06	NA	NA	NA	NA	gi|460410140|ref|XP_004250489.1|//PREDICTED: F-box protein At3g07870-like [Solanum lycopersicum]
Solyc10g006800.3.1	2881	3258.01391666125	926.953424158189	-1.81342401046119	0.000195193121416678	Down	3.66478214021101e-05	NA	NA	NA	K05391//cyclic nucleotide gated channel, other eukaryote	gi|460405631|ref|XP_004248279.1|//PREDICTED: cyclic nucleotide-gated ion channel 4-like [Solanum lycopersicum]
Solyc09g007120.3.1	3153	77.1394272391125	158.270833760538	1.03685508020764	0.0140095004963334	Up	0.00427633089860879	GO:0070860//RNA polymerase I core factor complex;GO:0005668//RNA polymerase transcription factor SL1 complex	GO:0001164//RNA polymerase I CORE element sequence-specific DNA binding;GO:0001187//transcription factor activity, RNA polymerase I CORE element binding transcription factor recruiting	GO:0001189//RNA polymerase I transcriptional preinitiation complex assembly at the promoter for the nuclear large rRNA transcript	K15213//TATA box-binding protein-associated factor RNA polymerase I subunit B	gi|460402430|ref|XP_004246715.1|//PREDICTED: TATA box-binding protein-associated factor RNA polymerase I subunit B [Solanum lycopersicum]
Solyc08g006940.3.1	1108	531.699790100734	1210.62672682586	1.18707030467538	8.10365265848641e-05	Up	1.3858490531212e-05	NA	NA	NA	K10268//F-box and leucine-rich repeat protein 2/20;K10273//F-box and leucine-rich repeat protein 7	gi|460397967|ref|XP_004244536.1|//PREDICTED: F-box protein SKIP19-like [Solanum lycopersicum]
Solyc12g056580.2.1	4175	2790.94529458075	6383.42685480423	1.19357727655444	0.0177986416281399	Up	0.00562593115426518	NA	NA	NA	K10999//cellulose synthase A [EC:2.4.1.12]	gi|460414423|ref|XP_004252570.1|//PREDICTED: cellulose synthase A catalytic subunit 2 [UDP-forming]-like [Solanum lycopersicum]
Solyc11g010990.2.1	2668	77.30948431674	9.99829265183464	-2.95089175393676	0.0222102129494783	Down	0.00727287612796955	NA	GO:0046872//metal ion binding;GO:0003824//catalytic activity	GO:0008152//metabolic process	K00083//cinnamyl-alcohol dehydrogenase [EC:1.1.1.195]	gi|976924695|gb|KVI08636.1|//Alcohol dehydrogenase, C-terminal [Cynara cardunculus var. scolymus]
Solyc07g048070.3.1	1379	88.6544835247091	2779.14443004207	4.97030340762585	2.82936595714601e-12	Up	1.34676469631558e-13	GO:0031224//intrinsic component of membrane	NA	NA	K03189//urease accessory protein	gi|460395941|ref|XP_004243538.1|//PREDICTED: cytochrome b561 and DOMON domain-containing protein At5g47530-like [Solanum lycopersicum]
Solyc06g083920.3.1	2390	262.925490094986	109.332588659296	-1.26593052727457	0.00141255700820327	Down	0.000324605160724319	NA	NA	NA	K13806//sn1-specific diacylglycerol lipase [EC:3.1.1.-]	gi|723711263|ref|XP_010323059.1|//PREDICTED: uncharacterized protein LOC101260059 isoform X1 [Solanum lycopersicum];gi|723711266|ref|XP_010323060.1|//PREDICTED: uncharacterized protein LOC101260059 isoform X2 [Solanum lycopersicum];gi|460393520|ref|XP_004242357.1|//PREDICTED: uncharacterized protein LOC101260059 isoform X3 [Solanum lycopersicum]
Solyc05g009930.3.1	7234	16310.9260093109	1119.41556059525	-3.86502107705119	8.0094627345816e-29	Down	6.23966643628878e-31	GO:0009527//plastid outer membrane	NA	GO:0009658//chloroplast organization	K01551//arsenite-transporting ATPase [EC:3.6.3.16]	gi|723698105|ref|XP_010320785.1|//PREDICTED: protein CHUP1, chloroplastic [Solanum lycopersicum]
Solyc04g082750.3.1	2477	231.677982374159	85.8261911638932	-1.43263106321756	0.030046515033141	Down	0.0103193897985449	GO:0016021//integral component of membrane	GO:0033764//steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;GO:0003854//3-beta-hydroxy-delta5-steroid dehydrogenase activity	GO:0008202//steroid metabolic process;GO:0006694//steroid biosynthetic process;GO:0055114//oxidation-reduction process	K07748//sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating) [EC:1.1.1.170]	gi|460385533|ref|XP_004238458.1|//PREDICTED: short-chain dehydrogenase/reductase family 42E member 1 [Solanum lycopersicum]
Solyc10g083300.2.1	2290	77.6366471107726	5.67293644295424	-3.7745702079114	3.72042734796401e-11	Down	2.09992103671142e-12	NA	NA	NA	K01193//beta-fructofuranosidase [EC:3.2.1.26]	gi|460407998|ref|XP_004249435.1|//PREDICTED: beta-fructofuranosidase, insoluble isoenzyme 1 isoform X1 [Solanum lycopersicum]
Solyc06g072680.3.1	1277	1.2008982389598	56.955394970193	5.56764669335733	4.87863940301277e-08	Up	4.47711726935196e-09	NA	NA	NA	K17279//receptor expression-enhancing protein 5/6	gi|970035075|ref|XP_015078868.1|//PREDICTED: HVA22-like protein e [Solanum pennellii];gi|460391682|ref|XP_004241448.1|//PREDICTED: HVA22-like protein e [Solanum lycopersicum]
Solyc03g120430.3.1	1802	4787.82254381568	1107.85949786184	-2.11159475514401	6.99759105832e-10	Down	4.84364343048317e-11	NA	GO:0016301//kinase activity	NA	K15918//D-glycerate 3-kinase [EC:2.7.1.31]	gi|460379890|ref|XP_004235693.1|//PREDICTED: D-glycerate 3-kinase, chloroplastic [Solanum lycopersicum]
Solyc04g007970.3.1	918	2456.98412691225	5105.50759887127	1.05516586625393	0.00333788902818808	Up	0.000847909412818763	NA	GO:0016879//ligase activity, forming carbon-nitrogen bonds	GO:0006464//cellular protein modification process	K10704//ubiquitin-conjugating enzyme E2 variant	gi|565324149|ref|NP_001274294.1|//ubiquitin-conjugating enzyme E2 variant 1B-like [Solanum lycopersicum]
Solyc03g120340.3.1	2815	219.991414769261	446.93242137967	1.02260948129527	0.0150462379349754	Up	0.00464488379966701	NA	NA	NA	NA	gi|460379901|ref|XP_004235698.1|//PREDICTED: uncharacterized protein LOC543949 isoform X2 [Solanum lycopersicum]
Solyc01g101150.2.1	2684	77.6981305735228	31.0732107784576	-1.32220856555363	0.00133196738025012	Down	0.000304344716003176	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial	gi|460370940|ref|XP_004231306.1|//PREDICTED: pentatricopeptide repeat-containing protein At1g63330-like isoform X1 [Solanum lycopersicum]
Solyc07g049310.3.1	1995	263.195708167786	88.0490109350664	-1.57975726048972	7.14903814473078e-06	Down	9.87829297842441e-07	GO:0016021//integral component of membrane	GO:0022891//substrate-specific transmembrane transporter activity	GO:0008643//carbohydrate transport;GO:0055085//transmembrane transport	K08150//MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13	gi|663071091|ref|NP_001287652.1|//probable plastidic glucose transporter 1-like [Solanum lycopersicum]
Solyc01g094460.3.1	9636	1236.68139517379	332.673031076274	-1.89429704769718	0.000322948745896236	Down	6.36195065626065e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460368095|ref|XP_004229905.1|//PREDICTED: uncharacterized protein LOC101253830 [Solanum lycopersicum];gi|697174657|ref|XP_009596260.1|//PREDICTED: uncharacterized protein LOC104092373 [Nicotiana tomentosiformis]
Solyc12g087960.2.1	1362	138.998965135127	669.494810767441	2.26799873136872	3.27164336994468e-08	Up	2.91579666674286e-09	NA	NA	NA	NA	gi|460414731|ref|XP_004252717.1|//PREDICTED: uncharacterized protein LOC101249158 [Solanum lycopersicum]
Solyc08g008220.3.1	882	6672.51885011596	14155.5201892202	1.08506138544253	6.05215325808627e-05	Up	1.01154969469431e-05	NA	GO:0032559//adenyl ribonucleotide binding;GO:0019787//ubiquitin-like protein transferase activity	GO:0032446//protein modification by small protein conjugation;GO:0019941//modification-dependent protein catabolic process	K06689//ubiquitin-conjugating enzyme E2 D [EC:2.3.2.23]	gi|565490451|ref|XP_006302865.1|//hypothetical protein CARUB_v10020996mg, partial [Capsella rubella]
Solyc06g036080.3.1	3145	681.992858324855	256.098496777095	-1.41305784698762	1.39891977316346e-05	Down	2.04613135153326e-06	NA	NA	NA	K20717;K04420//mitogen-activated protein kinase kinase kinase 2 [EC:2.7.11.25];K04421//mitogen-activated protein kinase kinase kinase 3 [EC:2.7.11.25]	gi|460390199|ref|XP_004240726.1|//PREDICTED: mitogen-activated protein kinase kinase kinase YODA-like [Solanum lycopersicum]
Solyc03g114810.3.1	2703	557.726056156075	1205.73886045836	1.1122889031416	0.0381628549651995	Up	0.0135919963915492	NA	NA	NA	K13648//alpha-1,4-galacturonosyltransferase [EC:2.4.1.43]	gi|460380659|ref|XP_004236072.1|//PREDICTED: probable galacturonosyltransferase 11 [Solanum lycopersicum]
Solyc07g005580.3.1	1897	746.079704974684	262.935289898718	-1.50462197782084	2.93019534902743e-05	Down	4.58839669795148e-06	NA	NA	NA	K00655//1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51]	gi|460393994|ref|XP_004242591.1|//PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase 1, chloroplastic [Solanum lycopersicum]
Solyc02g085150.3.1	1361	624.561141529463	196.346354693897	-1.66944199802684	0.000503815363458948	Down	0.000103812857059828	NA	NA	NA	K20254//perilipin-4	gi|460373212|ref|XP_004232415.1|//PREDICTED: protein RADIALIS-like 5 [Solanum lycopersicum];gi|460375861|ref|XP_004233722.1|//PREDICTED: embryonic protein DC-8 [Solanum lycopersicum]
Solyc05g006610.3.1	1695	30.4294302026245	109.005563622373	1.84086254729552	0.0281515766588362	Up	0.00956994107382534	NA	NA	NA	NA	gi|565381752|ref|XP_006357226.1|//PREDICTED: uncharacterized protein LOC102586983 [Solanum tuberosum]
Solyc06g009890.2.1	1408	69.9029793826667	0.588116613164318	-6.893107892339	1.33678791253552e-07	Down	1.33190476002961e-08	NA	NA	NA	NA	NA
Solyc03g116290.2.1	1662	12.5696688963455	0.738559406284928	-4.0890888679752	0.00206427808219312	Down	0.000494601890276479	NA	NA	NA	K06892//feruloyl-CoA ortho-hydroxylase [EC:1.14.11.-]	gi|460381462|ref|XP_004236468.1|//PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase-like isoform X1 [Solanum lycopersicum]
Solyc11g056620.2.1	1939	161.352250591647	2835.64129538007	4.1353894389944	1.03386164014291e-11	Up	5.3411817252053e-13	NA	NA	NA	K03495//tRNA uridine 5-carboxymethylaminomethyl modification enzyme	gi|460410905|ref|XP_004250856.1|//PREDICTED: uncharacterized protein LOC101262986 [Solanum lycopersicum]
Solyc12g094390.1.1	729	32.8889174487587	352.694921576845	3.42274737546388	1.85276580974373e-05	Up	2.78315424678219e-06	NA	NA	NA	NA	gi|460415724|ref|XP_004253207.1|//PREDICTED: uncharacterized protein At1g76070-like [Solanum lycopersicum]
Solyc06g084483.1.1	4405	274.210004116001	30.6564729936095	-3.16101757593967	1.11899022701234e-05	Down	1.60165590865044e-06	NA	NA	NA	K14485//transport inhibitor response 1	gi|460393442|ref|XP_004242318.1|//PREDICTED: uncharacterized protein LOC101248116 [Solanum lycopersicum]
Solyc03g026090.3.1	2462	210.5566659502	78.4122354253545	-1.42505785529131	0.0201742336203305	Down	0.00650391183026086	NA	NA	NA	NA	gi|460377318|ref|XP_004234440.1|//PREDICTED: putative non-specific lipid-transfer protein 14 [Solanum lycopersicum];gi|460377169|ref|XP_004234367.1|//PREDICTED: uncharacterized protein LOC101268068 [Solanum lycopersicum]
Solyc06g050930.3.1	2766	499.601638136558	1691.01290819812	1.75903755997739	0.00652858093889952	Up	0.00180808693812522	NA	NA	NA	K01227//mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase [EC:3.2.1.96]	gi|919184397|ref|NP_001299814.1|//cytosolic endo-beta-N-acetylglucosaminidase [Solanum lycopersicum]
Solyc06g071050.3.1	1167	887.943014970045	3120.68434079439	1.81332343750264	0.00239692051676126	Up	0.000584845747082124	NA	NA	NA	NA	gi|723708555|ref|XP_004241563.2|//PREDICTED: hypersensitive-induced response protein 1 [Solanum lycopersicum]
BGI_novel_G000098	1367	0.757767464780956	17.2401677422704	4.50787480314668	0.00519895257557816	Up	0.00139529111187325	NA	NA	NA	NA	NA
Solyc07g065270.1.1	1828	1420.28295989547	544.179046346929	-1.38402507167703	0.00369823010546295	Down	0.000954608747589494	GO:0005634//nucleus	GO:0043565//sequence-specific DNA binding;GO:0003700//transcription factor activity, sequence-specific DNA binding	GO:0044699//single-organism process;GO:0006355//regulation of transcription, DNA-templated;GO:0050896//response to stimulus	K14494//DELLA protein	gi|460396992|ref|XP_004244053.1|//PREDICTED: scarecrow-like protein 21 [Solanum lycopersicum];gi|565358695|ref|XP_006346161.1|//PREDICTED: scarecrow-like protein 21 [Solanum tuberosum]
Solyc01g107090.2.1	706	140.215938634137	836.622366885477	2.57692621579868	0.00268747973047868	Up	0.000665759292111277	NA	NA	NA	K15920//beta-D-xylosidase 4 [EC:3.2.1.37]	gi|723664977|ref|XP_010315179.1|//PREDICTED: uncharacterized protein LOC104645408 [Solanum lycopersicum]
Solyc02g092260.3.1	2543	553.68494242429	1116.57282387889	1.01194015496419	0.00105096322848905	Up	0.00023465296476254	GO:0044424//intracellular part	GO:0008080//N-acetyltransferase activity	GO:0006525//arginine metabolic process	K14682//amino-acid N-acetyltransferase [EC:2.3.1.1]	gi|460372227|ref|XP_004231933.1|//PREDICTED: probable amino-acid acetyltransferase NAGS1, chloroplastic [Solanum lycopersicum]
Solyc03g111520.2.1	459	4.38494275513765	42.53523147029	3.27802839134029	2.03672819270253e-06	Up	2.53338377033261e-07	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723688141|ref|XP_004236317.2|//PREDICTED: putative cysteine-rich receptor-like protein kinase 9 [Solanum lycopersicum];gi|970016573|ref|XP_015069397.1|//PREDICTED: putative cysteine-rich receptor-like protein kinase 9 [Solanum pennellii]
Solyc02g093670.3.1	2363	6.01204334770913	33.1814413455509	2.4644492394353	0.0301051089792164	Up	0.0103428801797166	NA	NA	NA	K13456//RPM1-interacting protein 4	gi|460371996|ref|XP_004231820.1|//PREDICTED: RPM1-interacting protein 4 [Solanum lycopersicum];gi|723669080|ref|XP_010315947.1|//PREDICTED: uncharacterized protein LOC104645667 [Solanum lycopersicum]
Solyc06g060310.3.1	2929	4294.50346993839	182.78685564573	-4.55425710290697	1.04984776082348e-20	Down	1.79618354785291e-22	NA	NA	NA	K13600//chlorophyllide a oxygenase [EC:1.14.13.122]	gi|460392857|ref|XP_004242029.1|//PREDICTED: chlorophyllide a oxygenase, chloroplastic [Solanum lycopersicum]
Solyc07g055530.3.1	2107	118.929166352683	267.708415729947	1.17055992551729	0.000709204340675218	Up	0.000151791088570043	NA	NA	NA	K07428//cytochrome P450, family 4, subfamily X [EC:1.14.14.1];K07426//cytochrome P450, family 4, subfamily B, polypeptide 1 [EC:1.14.14.1]	gi|697123816|ref|XP_009615907.1|//PREDICTED: cytochrome P450 CYP72A219-like [Nicotiana tomentosiformis];gi|460395370|ref|XP_004243256.1|//PREDICTED: cytochrome P450 CYP72A219-like [Solanum lycopersicum]
Solyc06g084390.3.1	2079	487.30267581421	240.729196949606	-1.01740701414931	0.00151241304508905	Down	0.000350536167972406	GO:0044432//endoplasmic reticulum part	GO:0046914//transition metal ion binding;GO:0004871//signal transducer activity;GO:0042562//hormone binding	GO:0009755//hormone-mediated signaling pathway	NA	gi|350537865|ref|NP_001234826.1|//ER auxin binding protein 1 precursor [Solanum lycopersicum]
Solyc04g014540.2.1	2171	174.613294748515	41.0812631023972	-2.08761096222659	0.000199597098156607	Down	3.75416340129059e-05	NA	NA	NA	NA	gi|460381910|ref|XP_004236684.1|//PREDICTED: zinc finger protein 4-like [Solanum lycopersicum]
Solyc03g120290.3.1	835	99.4856942990306	10.8329769108614	-3.1990593347821	0.000100302322374703	Down	1.74934608018204e-05	NA	NA	NA	NA	gi|460379909|ref|XP_004235702.1|//PREDICTED: thionin-like protein 2 [Solanum lycopersicum]
Solyc04g015750.3.1	4717	40512.080403569	662.708553740182	-5.93383382219671	3.23579082772376e-20	Down	5.86176510464346e-22	NA	NA	NA	K03403//magnesium chelatase subunit H [EC:6.6.1.1]	gi|460381761|ref|XP_004236610.1|//PREDICTED: magnesium-chelatase subunit ChlH, chloroplastic [Solanum lycopersicum]
Solyc02g078160.3.1	1193	80.3477009802944	29.2732492343706	-1.45667385506393	0.00847822208141977	Down	0.00242438687276961	NA	NA	NA	NA	gi|460374165|ref|XP_004232882.1|//PREDICTED: uncharacterized protein LOC101251439 [Solanum lycopersicum]
Solyc11g072270.2.1	1035	508.189032309148	1334.0826833917	1.39241093950772	5.9667031059495e-05	Up	9.95043599821756e-06	NA	NA	NA	K13448//calcium-binding protein CML	gi|460411713|ref|XP_004251250.1|//PREDICTED: probable calcium-binding protein CML13 [Solanum lycopersicum]
Solyc01g104270.3.1	3390	5052.01405177136	2315.48506704872	-1.12554419898195	8.42128998178696e-07	Down	9.71518282899606e-08	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K10249//elongation of very long chain fatty acids protein 4 [EC:2.3.1.199]	gi|976916236|gb|KVI01761.1|//Protein of unknown function DUF3411 [Cynara cardunculus var. scolymus];gi|460369308|ref|XP_004230505.1|//PREDICTED: uncharacterized protein LOC101257411 [Solanum lycopersicum]
Solyc09g056385.1.1	717	380.161487318446	2210.73539903281	2.539842069913	1.53898451249134e-07	Up	1.54827762010367e-08	NA	NA	NA	NA	gi|460403095|ref|XP_004247036.1|//PREDICTED: auxin-induced in root cultures protein 12 [Solanum lycopersicum]
Solyc09g009660.3.1	1388	291.973524340961	102.022003711531	-1.51695721327371	0.00115478403087767	Down	0.000260330021572541	NA	NA	NA	K15287//solute carrier family 35, member F1/2	gi|460402050|ref|XP_004246528.1|//PREDICTED: solute carrier family 35 member F2-like [Solanum lycopersicum]
Solyc01g107650.3.1	2649	461.173651738965	160.917149972061	-1.51899199825187	0.0318962661690322	Down	0.0110676286628717	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460369792|ref|XP_004230741.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g37250 [Solanum lycopersicum]
Solyc08g061130.3.1	1560	153.696401674528	34.6718961645201	-2.14824474610892	0.000922491803792388	Down	0.000203527247153986	GO:0043231//intracellular membrane-bounded organelle	GO:0003677//DNA binding;GO:0005515//protein binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0007602//phototransduction;GO:0006351//transcription, DNA-templated	K16241//transcription factor HY5	gi|350537753|ref|NP_001234820.1|//transcription factor HY5 [Solanum lycopersicum]
Solyc05g005590.3.1	1631	940.748307503481	312.821257071677	-1.58847023764459	1.95419281778392e-08	Down	1.67899748210524e-09	GO:0044424//intracellular part	GO:0008168//methyltransferase activity;GO:0051540//metal cluster binding	GO:0042254//ribosome biogenesis;GO:0009451//RNA modification	K06941//23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]	gi|723696866|ref|XP_010320581.1|//PREDICTED: uncharacterized protein LOC104647251 [Solanum lycopersicum]
Solyc04g074230.3.1	1565	2385.10445739684	5836.9313116934	1.29115763935755	5.9488084444945e-07	Up	6.64551174450202e-08	NA	GO:0005515//protein binding;GO:0019904//protein domain specific binding	NA	K06630//14-3-3 protein epsilon	gi|3925703|emb|CAA65150.1|//14-3-3 protein [Solanum lycopersicum];gi|350539221|ref|NP_001234637.1|//14-3-3 protein 7 [Solanum lycopersicum]
Solyc03g063380.2.1	2862	74.1479239033281	34.4915232286149	-1.10416445557544	0.010999330146894	Down	0.00325453566072927	NA	NA	NA	K19090//CRISPR-associated protein Cas5t;K17710//pentatricopeptide repeat domain-containing protein 1	gi|697189687|ref|XP_009603904.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g39350 [Nicotiana tomentosiformis];gi|460375752|ref|XP_004233668.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g39350 [Solanum lycopersicum]
Solyc03g113240.3.1	2576	6357.02341376788	1360.14562275464	-2.22459028150205	9.41162914532564e-15	Down	3.13627421198789e-16	NA	NA	NA	K01184//polygalacturonase [EC:3.2.1.15];K01213//galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]	gi|460380892|ref|XP_004236187.1|//PREDICTED: uncharacterized protein LOC101245045 [Solanum lycopersicum]
Solyc09g018790.3.1	2900	6824.03798338951	3409.62320292775	-1.00101336089366	0.000242065834076268	Down	4.62693304436821e-05	NA	GO:0016616//oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;GO:0048037//cofactor binding	GO:0006007//glucose catabolic process;GO:0009081//branched-chain amino acid metabolic process	K18121//glyoxylate/succinic semialdehyde reductase [EC:1.1.1.79 1.1.1.-]	gi|914098152|ref|NP_001233832.2|//succinic semialdehyde reductase isofom1 [Solanum lycopersicum]
Solyc05g009050.2.1	2315	137.227621419047	277.706580392381	1.0169904639655	0.0418933613723163	Up	0.015184547710765	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460386438|ref|XP_004238905.1|//PREDICTED: probable receptor-like protein kinase At1g67000 isoform X2 [Solanum lycopersicum];gi|723697853|ref|XP_010320752.1|//PREDICTED: probable receptor-like protein kinase At1g67000 isoform X1 [Solanum lycopersicum]
Solyc01g110820.3.1	2268	219.27866739479	103.644321172126	-1.08112439453769	0.00521326780610909	Down	0.00139989493347286	GO:0005689//U12-type spliceosomal complex	GO:0030626//U12 snRNA binding;GO:0000166//nucleotide binding;GO:0097157//pre-mRNA intronic binding	GO:0010229//inflorescence development;GO:0000398//mRNA splicing, via spliceosome	K13157//U11/U12 small nuclear ribonucleoprotein 65 kDa protein	gi|460370096|ref|XP_004230890.1|//PREDICTED: U11/U12 small nuclear ribonucleoprotein 65 kDa protein [Solanum lycopersicum]
Solyc08g066890.3.1	331	0.344375088887557	3.85028065066128	3.48291091789569	0.0430360960778891	Up	0.0156757391856692	NA	NA	NA	NA	gi|723722784|ref|XP_010325109.1|//PREDICTED: bark storage protein A [Solanum lycopersicum]
Solyc01g101240.3.1	1815	10419.8482261579	3382.73296825664	-1.62307306280093	0.00235136785924038	Down	0.000572328616402255	NA	GO:0004175//endopeptidase activity	GO:0019538//protein metabolic process	K08245//phytepsin [EC:3.4.23.40]	gi|24817258|emb|CAD56221.1|//hypothetical protein [Cicer arietinum];gi|171854659|dbj|BAG16519.1|//putative aspartic protease [Capsicum chinense];gi|350535356|ref|NP_001234702.1|//aspartic protease precursor [Solanum lycopersicum]
Solyc07g066570.3.1	1653	479.701137820376	1733.95193183086	1.85385613845718	1.23380902428255e-07	Up	1.22161440127551e-08	NA	NA	NA	NA	gi|460396828|ref|XP_004243972.1|//PREDICTED: uncharacterized protein LOC101255012 [Solanum lycopersicum]
Solyc12g009150.2.1	2678	784.753161770345	389.297299342727	-1.0113666000704	0.0334914155790384	Down	0.0117060162473775	GO:0016021//integral component of membrane	NA	NA	K16573//gamma-tubulin complex component 6	gi|460412615|ref|XP_004251693.1|//PREDICTED: protein trichome birefringence-like 16 [Solanum lycopersicum]
Solyc03g007990.2.1	1702	1838.96700343502	5041.67870563164	1.45500858783135	0.00435139230654662	Up	0.00114413006300805	NA	NA	NA	NA	gi|460376884|ref|XP_004234226.1|//PREDICTED: uncharacterized protein LOC101266602 [Solanum lycopersicum]
Solyc08g069180.3.1	3235	95.0288320423193	39.5259936577185	-1.26556356655609	0.00575157168073681	Down	0.00156802576684468	NA	GO:0004672//protein kinase activity	NA	K17609//nucleoredoxin [EC:1.8.1.8]	gi|460399823|ref|XP_004245436.1|//PREDICTED: U-box domain-containing protein 52-like isoform X1 [Solanum lycopersicum]
Solyc12g006770.1.1	252	469.970328842758	73.1742909059024	-2.68316091099656	0.0151518102081682	Down	0.0046825577171583	NA	NA	NA	NA	NA
Solyc03g045140.3.1	2798	1094.98057914782	385.285574123739	-1.50690520736768	2.73891530248386e-09	Down	2.07654455242738e-10	NA	NA	NA	K00574//cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]	gi|460377833|ref|XP_004234691.1|//PREDICTED: uncharacterized protein LOC101256851 isoform X1 [Solanum lycopersicum];gi|697155792|ref|XP_009586640.1|//PREDICTED: uncharacterized protein LOC104084479 isoform X1 [Nicotiana tomentosiformis]
BGI_novel_G000192	1396	244.14044455088	35.115596951904	-2.79752744746113	0.00360939654673279	Down	0.00092885320406453	NA	NA	NA	K05747//Wiskott-Aldrich syndrome protein	gi|723696499|ref|XP_010320498.1|//PREDICTED: LOW QUALITY PROTEIN: extensin-3-like [Solanum lycopersicum]
Solyc03g058160.3.1	618	503.042039586567	130.009828731445	-1.95205827714259	0.00309836255387514	Down	0.000781173561741892	NA	NA	NA	K14664//IAA-amino acid hydrolase [EC:3.5.1.-];K10773//endonuclease III [EC:4.2.99.18]	gi|723681302|ref|XP_010317870.1|//PREDICTED: zinc finger protein 8 [Solanum lycopersicum]
Solyc12g096710.2.1	4643	429.286474224153	3311.68975935059	2.9475549040275	8.63572671576005e-06	Up	1.21707479917581e-06	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K01184//polygalacturonase [EC:3.2.1.15];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|723753372|ref|XP_010314786.1|//PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 isoform X3 [Solanum lycopersicum];gi|723753375|ref|XP_004253035.2|//PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 isoform X4 [Solanum lycopersicum]
Solyc04g005480.1.1	513	631.825781282292	8663.86610951715	3.77741223613215	2.8632897789515e-14	Up	1.02672013096442e-15	NA	NA	NA	NA	gi|460382657|ref|XP_004237054.1|//PREDICTED: uncharacterized protein LOC101251569 [Solanum lycopersicum]
Solyc01g109120.3.1	1992	206.223042981324	1644.27316633879	2.99517254579813	2.02830531938211e-10	Up	1.28678084597747e-11	NA	NA	NA	K10260//F-box and WD-40 domain protein 7;K03362//F-box and WD-40 domain protein 1/11;K14963//COMPASS component SWD3;K16794//platelet-activating factor acetylhydrolase IB subunit alpha	gi|460369996|ref|XP_004230841.1|//PREDICTED: myosin heavy chain kinase B [Solanum lycopersicum]
Solyc01g094920.3.1	1753	1817.81589635547	4072.99869585549	1.16388525785487	0.0335094350195774	Up	0.0117135635013268	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460368152|ref|XP_004229933.1|//PREDICTED: probable receptor-like protein kinase At5g24010 [Solanum lycopersicum]
Solyc12g056390.1.1	684	35.6424201551243	8.81125155509191	-2.01617644056488	0.0356171508561581	Down	0.0125538906551301	GO:0043231//intracellular membrane-bounded organelle	NA	GO:0006950//response to stress	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723751925|ref|XP_010314485.1|//PREDICTED: pathogenesis-related protein R major form [Solanum lycopersicum]
BGI_novel_G000219	318	31.5482422353575	4.65801628919372	-2.75977203539942	0.0215243346241086	Down	0.00701297931076986	NA	NA	NA	K10395//kinesin family member 4/21/27;K13024//inositol-hexakisphosphate/diphosphoinositol-pentakisphosphate 1-kinase [EC:2.7.4.24];K13356//alcohol-forming fatty acyl-CoA reductase [EC:1.2.1.84];K08247//methionine S-methyltransferase [EC:2.1.1.12];K15030//translation initiation factor 3 subunit M	gi|970045563|ref|XP_015084238.1|//PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC107027646 [Solanum pennellii]
Solyc07g053570.3.1	1659	85.0388898770566	15.1313125608678	-2.49058562451942	0.00371570483211489	Down	0.000959673430062772	NA	NA	NA	K14794//ribosomal RNA-processing protein 12;K12309//beta-galactosidase [EC:3.2.1.23]	gi|460395637|ref|XP_004243388.1|//PREDICTED: zinc finger protein MAGPIE [Solanum lycopersicum]
Solyc04g078850.3.1	1337	1293.09904459325	410.990863034007	-1.65365455621908	3.16874257234983e-10	Down	2.07879339769484e-11	GO:0009536//plastid;GO:0009507//chloroplast	GO:0005488//binding	GO:0008152//metabolic process	K16251//DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6]	gi|350539299|ref|NP_001233874.1|//protein DCL, chloroplastic [Solanum lycopersicum]
Solyc05g051780.3.1	2767	245.876149665333	121.834537470909	-1.01300863402237	0.0387124563343354	Down	0.013828144813327	NA	NA	NA	K18592//gamma-glutamyltranspeptidase / glutathione hydrolase / leukotriene-C4 hydrolase [EC:2.3.2.2 3.4.19.13 3.4.19.14]	gi|460388695|ref|XP_004240001.1|//PREDICTED: gamma-glutamyltranspeptidase 1-like isoform X1 [Solanum lycopersicum]
Solyc08g068090.3.1	849	124.989268425625	30.9310124136705	-2.01467826979395	0.000308012534772613	Down	6.03556692746245e-05	NA	GO:0005506//iron ion binding	GO:0015669//gas transport	NA	gi|460399447|ref|XP_004245252.1|//PREDICTED: two-on-two hemoglobin-3-like [Solanum lycopersicum]
Solyc12g055920.2.1	983	342.766459319719	25.0051086697266	-3.77693116453148	1.63318954306788e-09	Down	1.19743694319909e-10	NA	GO:0046872//metal ion binding	NA	K06268//serine/threonine-protein phosphatase 2B regulatory subunit	gi|460414596|ref|XP_004252654.1|//PREDICTED: calcineurin B-like protein 4 isoform X1 [Solanum lycopersicum];gi|723752048|ref|XP_010314505.1|//PREDICTED: calcineurin B-like protein 4 isoform X2 [Solanum lycopersicum]
Solyc03g097960.1.1	1062	53.9819220009767	12.0309639374261	-2.1657241063369	0.00662663437328289	Down	0.00184042987607465	NA	NA	NA	K16219//protein N-terminal methyltransferase [EC:2.1.1.244];K20393//PRA1 family protein 3	gi|723683936|ref|XP_010318329.1|//PREDICTED: uncharacterized protein LOC101264193 [Solanum lycopersicum]
Solyc01g008820.3.1	1394	1334.15519529964	3503.0692909398	1.39269302756789	3.20508277747378e-06	Up	4.14553348659386e-07	GO:0031224//intrinsic component of membrane	GO:0004175//endopeptidase activity	NA	K09595//minor histocompatibility antigen H13 [EC:3.4.23.-]	gi|460365211|ref|XP_004228497.1|//PREDICTED: signal peptide peptidase-like [Solanum lycopersicum]
Solyc10g006970.3.1	792	7767.57410532734	558.453296570758	-3.79795556188814	2.30596482329221e-17	Down	5.75029993582261e-19	NA	NA	NA	K03671//thioredoxin 1	gi|460405609|ref|XP_004248268.1|//PREDICTED: thioredoxin M-type, chloroplastic-like [Solanum lycopersicum]
Solyc07g049530.3.1	2034	5665.14051808338	69631.2695259936	3.61955168084509	1.65113455593911e-07	Up	1.67279846542511e-08	NA	GO:0043169//cation binding;GO:0046872//metal ion binding;GO:0009815//1-aminocyclopropane-1-carboxylate oxidase activity;GO:0016641//oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor;GO:0019842//vitamin binding;GO:0051213//dioxygenase activity;GO:0031418//L-ascorbic acid binding	GO:0009693//ethylene biosynthetic process;GO:0009835//fruit ripening;GO:0003006//developmental process involved in reproduction;GO:0009692//ethylene metabolic process;GO:0006950//response to stress;GO:0055114//oxidation-reduction process	K05933//aminocyclopropanecarboxylate oxidase [EC:1.14.17.4]	gi|902763266|ref|NP_001234024.2|//1-aminocyclopropane-1-carboxylate oxidase 1 [Solanum lycopersicum]
Solyc05g012180.3.1	1434	78.8517321647715	1524.00182810077	4.27257837560479	2.65084015290198e-08	Up	2.32299284310145e-09	NA	GO:0016787//hydrolase activity	NA	K08233//polyneuridine-aldehyde esterase [EC:3.1.1.78]	gi|460386716|ref|XP_004239042.1|//PREDICTED: putative methylesterase 11, chloroplastic [Solanum lycopersicum]
Solyc09g007190.3.1	856	2122.6977090782	593.708071507115	-1.83807330143837	3.24401715789459e-05	Down	5.135433453697e-06	NA	GO:0003824//catalytic activity	NA	K10878//meiotic recombination protein SPO11;K15717//prostamide/prostaglandin F2alpha synthase [EC:1.11.1.20]	gi|460402416|ref|XP_004246708.1|//PREDICTED: thioredoxin-like protein AAED1, chloroplastic isoform X1 [Solanum lycopersicum]
Solyc05g007630.3.1	4182	4.6620320483524	237.764374661092	5.67242983329822	5.98907588550583e-11	Up	3.50709639784168e-12	NA	GO:0032559//adenyl ribonucleotide binding	GO:0012501//programmed cell death;GO:0006950//response to stress	K13453;K13457//disease resistance protein RPM1	gi|460387448|ref|XP_004239389.1|//PREDICTED: putative late blight resistance protein homolog R1B-23 isoform X1 [Solanum lycopersicum]
Solyc06g076510.3.1	2241	1290.45131118014	631.459611235745	-1.03111334355855	0.0149645590494026	Down	0.00461632215196271	NA	NA	NA	K01079//phosphoserine phosphatase [EC:3.1.3.3]	gi|460391162|ref|XP_004241192.1|//PREDICTED: phosphoserine phosphatase, chloroplastic [Solanum lycopersicum]
Solyc02g070950.1.1	798	8509.39395782304	700.782124031484	-3.60201850690168	0.000426256941226564	Down	8.64017163556753e-05	GO:0031224//intrinsic component of membrane;GO:0009521//photosystem;GO:0009534//chloroplast thylakoid	GO:0043169//cation binding;GO:0046906//tetrapyrrole binding	GO:0006464//cellular protein modification process;GO:0006091//generation of precursor metabolites and energy	K08912//light-harvesting complex II chlorophyll a/b binding protein 1	gi|970007787|ref|XP_015064801.1|//PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like [Solanum pennellii]
Solyc02g068460.1.1	579	0.738322298122878	9.75184012404638	3.72335183875463	0.0080656764535062	Up	0.00229361285462199	NA	NA	NA	NA	gi|970007767|ref|XP_015064789.1|//PREDICTED: uncharacterized protein LOC107010026 [Solanum pennellii]
Solyc09g090540.3.1	1641	306.4166080779	802.55584838331	1.38910729536377	5.21017718174185e-08	Up	4.81632600667951e-09	NA	NA	NA	NA	gi|460404936|ref|XP_004247934.1|//PREDICTED: histone H2A.Z-specific chaperone CHZ1 [Solanum lycopersicum]
Solyc12g094510.2.1	1161	178.388605367336	817.867503478744	2.19684367643102	5.86500127104608e-08	Up	5.49379312439943e-09	NA	NA	NA	NA	gi|460415568|ref|XP_004253130.1|//PREDICTED: uncharacterized protein LOC101251964 [Solanum lycopersicum]
Solyc02g063020.2.1	1711	96.4396157967747	1275.77232563932	3.72560117501827	2.53298538536682e-15	Up	7.83650614974824e-17	NA	NA	GO:0006810//transport	NA	gi|460375420|ref|XP_004233504.1|//PREDICTED: protein spinster-like [Solanum lycopersicum]
Solyc12g017480.2.1	1415	61.7945228029855	492.758434768179	2.99532969202901	0.000142887257316539	Up	2.5943187356078e-05	NA	NA	NA	K19613//leucine-rich repeat protein SHOC2	gi|460413169|ref|XP_004251967.1|//PREDICTED: plant intracellular Ras-group-related LRR protein 6 [Solanum lycopersicum]
Solyc02g088540.3.1	1715	468.511273191614	220.507539728846	-1.08725577590164	0.000625861589212741	Down	0.000132390208691751	NA	GO:0016423//tRNA (guanine) methyltransferase activity;GO:0003676//nucleic acid binding	GO:0010467//gene expression;GO:0006730//one-carbon metabolic process;GO:0009451//RNA modification	K15507//21S rRNA (GM2251-2'-O)-methyltransferase [EC:2.1.1.-];K03437//RNA methyltransferase, TrmH family	gi|460372747|ref|XP_004232187.1|//PREDICTED: uncharacterized protein LOC101267667 [Solanum lycopersicum]
Solyc02g093470.3.1	2214	1146.47524876343	2746.72304104397	1.26050623826323	0.000637875598266686	Up	0.000135116406115455	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K03252//translation initiation factor 3 subunit C;K19995//secretory carrier-associated membrane protein	gi|460372030|ref|XP_004231837.1|//PREDICTED: uncharacterized protein LOC101259691 [Solanum lycopersicum]
Solyc11g012410.2.1	1101	2567.43574817361	503.553791162407	-2.35011036787873	2.16239749777515e-09	Down	1.61365729482103e-10	NA	GO:0043169//cation binding	NA	K10047//inositol-phosphate phosphatase / L-galactose 1-phosphate phosphatase [EC:3.1.3.25 3.1.3.93]	gi|350539998|ref|NP_001233837.1|//inositol monophosphatase 3 [Solanum lycopersicum]
Solyc08g076730.3.1	1320	307.879169854406	1682.84064044868	2.45046239704965	7.54904725124503e-07	Up	8.58792761696728e-08	NA	NA	NA	NA	gi|460400776|ref|XP_004245908.1|//PREDICTED: uncharacterized protein LOC101247449 [Solanum lycopersicum]
Solyc07g056080.1.1	246	10.8741906507475	143.793506218634	3.72501859197068	1.83348372443661e-15	Up	5.5767210345172e-17	NA	NA	NA	NA	NA
Solyc03g082640.2.1	1425	23.0365182046861	144.090789308394	2.64498353136733	3.12507274024177e-10	Up	2.04867591749072e-11	NA	GO:0016462//pyrophosphatase activity;GO:0032559//adenyl ribonucleotide binding	NA	K08900//mitochondrial chaperone BCS1	gi|460378481|ref|XP_004234999.1|//PREDICTED: mitochondrial chaperone BCS1-like [Solanum lycopersicum]
Solyc09g065690.3.1	2049	506.383387955261	250.944595392465	-1.01286120250975	0.00263145248880758	Down	0.000650114324430321	NA	NA	NA	K07047//uncharacterized protein;K10277//lysine-specific demethylase 8 [EC:1.14.11.27];K19219//jumonji domain-containing protein 7	gi|460403445|ref|XP_004247201.1|//PREDICTED: uncharacterized protein LOC101266753 isoform X1 [Solanum lycopersicum];gi|723730655|ref|XP_010326422.1|//PREDICTED: uncharacterized protein LOC101266753 isoform X2 [Solanum lycopersicum];gi|970049562|ref|XP_015086294.1|//PREDICTED: uncharacterized protein LOC107029405 [Solanum pennellii]
Solyc02g079720.1.1	324	2.24404945624898	52.0352943089476	4.53531412444124	2.56432543907642e-07	Up	2.67921731240913e-08	NA	GO:0046872//metal ion binding	NA	K16465//centrin-1;K10840//centrin-2	gi|698573197|ref|XP_009775343.1|//PREDICTED: calcium-binding protein PBP1-like [Nicotiana sylvestris]
Solyc04g080200.3.1	2824	199.971026128799	420.367562144509	1.07186036481341	0.0260181960824047	Up	0.00874385179211872	NA	NA	NA	NA	gi|723695704|ref|XP_010320381.1|//PREDICTED: uncharacterized protein LOC101266938 isoform X1 [Solanum lycopersicum];gi|460385818|ref|XP_004238598.1|//PREDICTED: uncharacterized protein LOC101266938 isoform X2 [Solanum lycopersicum]
Solyc05g008510.3.1	2328	319.329899688576	1738.2002667848	2.44447476423983	5.50436091838938e-06	Up	7.42928689633516e-07	NA	NA	NA	K03327//multidrug resistance protein, MATE family	gi|460386372|ref|XP_004238872.1|//PREDICTED: MATE efflux family protein 5 isoform X1 [Solanum lycopersicum]
Solyc01g058160.3.1	2781	348.483134404614	71.9606185818505	-2.27580934210506	0.00955145757981592	Down	0.00277842459195182	NA	NA	NA	NA	gi|460366461|ref|XP_004229100.1|//PREDICTED: uncharacterized protein LOC101259666 isoform X1 [Solanum lycopersicum]
Solyc09g025310.3.1	1304	17.1708816873563	103.632211358049	2.59343647108741	0.000434372456809951	Up	8.82086307104745e-05	NA	NA	NA	K12581//CCR4-NOT transcription complex subunit 7/8;K13126//polyadenylate-binding protein;K05941//glutathione gamma-glutamylcysteinyltransferase [EC:2.3.2.15];K01054//acylglycerol lipase [EC:3.1.1.23]	gi|460402908|ref|XP_004246952.1|//PREDICTED: NAC domain-containing protein 21/22-like [Solanum lycopersicum]
Solyc04g082500.3.1	1932	351.58647950448	2117.75946395422	2.59058723985329	1.59595063934823e-07	Up	1.61034679466068e-08	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004702//receptor signaling protein serine/threonine kinase activity	GO:0006464//cellular protein modification process	K00924;K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723696320|ref|XP_010320466.1|//PREDICTED: probable serine/threonine-protein kinase NAK isoform X2 [Solanum lycopersicum];gi|460385489|ref|XP_004238436.1|//PREDICTED: probable serine/threonine-protein kinase NAK isoform X1 [Solanum lycopersicum]
Solyc11g010500.1.1	975	2241.47158951973	5980.51956386885	1.41582461204737	0.0376881395521205	Up	0.013408698351087	GO:0016020//membrane	NA	GO:0006810//transport	K15104//solute carrier family 25 (mitochondrial oxoglutarate transporter), member 11	gi|460409427|ref|XP_004250140.1|//PREDICTED: mitochondrial uncoupling protein 5 [Solanum lycopersicum]
Solyc01g095370.3.1	1992	527.716762867517	227.686564798381	-1.21271464707219	0.00281394599081755	Down	0.000700234957309451	NA	NA	NA	K13145//integrator complex subunit 8	gi|460368221|ref|XP_004229966.1|//PREDICTED: F-box/kelch-repeat protein At3g61590 [Solanum lycopersicum]
Solyc09g005830.1.1	1917	3.75638094119749	91.1175021252143	4.60031291610481	1.36337899347865e-06	Up	1.64197015354463e-07	NA	NA	NA	K07195//exocyst complex component 7	gi|460402478|ref|XP_004246739.1|//PREDICTED: exocyst complex component EXO70A1 [Solanum lycopersicum]
Solyc09g063020.3.1	990	17.9633599141686	0.786033241634226	-4.51432308469822	0.00519731497498968	Down	0.00139444882920739	NA	NA	NA	K20362//protein transport protein YIF1	gi|723730176|ref|XP_010326329.1|//PREDICTED: protein YIF1B-B-like isoform X4 [Solanum lycopersicum]
Solyc03g025760.3.1	2611	94.6274532196429	34.2247779024611	-1.4672176181773	0.0168087905753033	Down	0.00525728946314931	NA	NA	NA	K13667//protein glucosyltransferase [EC:2.4.1.-]	gi|970016122|ref|XP_015069155.1|//PREDICTED: O-glucosyltransferase rumi homolog [Solanum pennellii];gi|460377225|ref|XP_004234394.1|//PREDICTED: O-glucosyltransferase rumi homolog [Solanum lycopersicum]
Solyc10g074470.2.1	2954	305.936032810822	87.9752771660121	-1.79805997664108	0.0083604643198193	Down	0.00238585488417089	NA	NA	NA	NA	gi|970059292|ref|XP_015056375.1|//PREDICTED: uncharacterized protein LOC107002735 [Solanum pennellii]
Solyc02g030480.3.1	1616	433.917690688598	150.096953444474	-1.53152671106695	0.0196600079885152	Down	0.00630955282885026	NA	GO:0016616//oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;GO:0046914//transition metal ion binding	GO:0008152//metabolic process	K00083//cinnamyl-alcohol dehydrogenase [EC:1.1.1.195]	gi|460371508|ref|XP_004231578.1|//PREDICTED: probable cinnamyl alcohol dehydrogenase 6 [Solanum lycopersicum]
Solyc06g082080.3.1	1625	206.983879954239	990.500827345993	2.25863976614451	1.42759290508298e-07	Up	1.42716720271081e-08	GO:0043234//protein complex	GO:0043169//cation binding;GO:0004721//phosphoprotein phosphatase activity	GO:0006464//cellular protein modification process	K17506//protein phosphatase 1L [EC:3.1.3.16]	gi|460393842|ref|XP_004242517.1|//PREDICTED: probable protein phosphatase 2C 25 [Solanum lycopersicum]
Solyc12g098180.2.1	1618	4.6695188765999	115.841113590312	4.63272965646689	2.26552805578579e-12	Up	1.0657135852101e-13	GO:0031224//intrinsic component of membrane	NA	GO:0006810//transport	K08511//vesicle-associated membrane protein 72	gi|565366521|ref|XP_006349936.1|//PREDICTED: putative vesicle-associated membrane protein 726 isoform X1 [Solanum tuberosum]
Solyc04g011880.1.1	309	59.775111668159	8.25571440788659	-2.85607995088723	1.72866729859694e-05	Down	2.57998503935521e-06	NA	NA	NA	K03676//glutaredoxin 3	gi|460381970|ref|XP_004236713.1|//PREDICTED: monothiol glutaredoxin-S1-like [Solanum lycopersicum]
Solyc10g008710.3.1	1189	49.3698210038931	5.06733024189069	-3.28433165582196	0.000290853515475372	Down	5.66572413849074e-05	NA	NA	NA	K21026	gi|460406004|ref|XP_004248464.1|//PREDICTED: GDSL esterase/lipase At1g28610-like isoform X1 [Solanum lycopersicum]
Solyc12g099100.2.1	1738	351.810696428667	3332.84972565887	3.2438850172711	0.00204812146719719	Up	0.000490349045169508	GO:0044424//intracellular part	GO:0016668//oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor;GO:0050662//coenzyme binding	GO:0019725//cellular homeostasis;GO:0008152//metabolic process	K00382//dihydrolipoamide dehydrogenase [EC:1.8.1.4]	gi|460415176|ref|XP_004252936.1|//PREDICTED: dihydrolipoyl dehydrogenase, mitochondrial-like [Solanum lycopersicum]
Solyc12g035590.2.1	204	10.5520108346131	1.66902199127693	-2.66044308193748	0.0206790198441331	Down	0.00669593877240138	GO:0009536//plastid	GO:0000166//nucleotide binding;GO:0048037//cofactor binding;GO:0016491//oxidoreductase activity	GO:0006091//generation of precursor metabolites and energy	K05579//NAD(P)H-quinone oxidoreductase subunit H [EC:1.6.5.3]	gi|985701340|gb|AMD38438.1|//NdhH (chloroplast) [Cynanchum wilfordii]
Solyc01g104670.3.1	2112	1446.9791682695	3912.83078375368	1.4351685681071	2.11144399959184e-07	Up	2.17928598287975e-08	NA	NA	NA	K19600//tubby-related protein 1	gi|460369442|ref|XP_004230571.1|//PREDICTED: tubby-like F-box protein 8 [Solanum lycopersicum]
Solyc04g072560.3.1	3994	832.622292735303	2570.20498434384	1.62614933382031	0.0450778471119689	Up	0.0165589005251399	NA	NA	GO:0015031//protein transport	K19476//vacuolar protein sorting-associated protein IST1	gi|460384348|ref|XP_004237874.1|//PREDICTED: uncharacterized protein LOC101268389 [Solanum lycopersicum]
Solyc01g007020.3.1	753	263.371737271071	3157.84528274675	3.58376804699258	7.5970684725419e-07	Up	8.64538916306487e-08	NA	NA	NA	NA	gi|460365602|ref|XP_004228690.1|//PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Solanum lycopersicum]
Solyc10g005610.2.1	2262	67.2808404994471	172.391783191483	1.35742337851617	0.00562866679692138	Up	0.00152843438256941	NA	NA	NA	K06955//uncharacterized protein	gi|460405786|ref|XP_004248355.1|//PREDICTED: uncharacterized protein LOC101244039 [Solanum lycopersicum]
Solyc02g022850.1.1	1626	627.021999248028	1354.04456213477	1.1106872529505	0.0148228638705895	Up	0.0045654288117892	NA	GO:0016491//oxidoreductase activity	NA	NA	gi|460371465|ref|XP_004231557.1|//PREDICTED: reticuline oxidase-like protein [Solanum lycopersicum]
Solyc05g051580.3.1	3369	370.105446001303	4.40079377536869	-6.39402878693472	4.00664786731973e-22	Down	5.95889555337919e-24	NA	NA	NA	K10523//speckle-type POZ protein	gi|460388726|ref|XP_004240016.1|//PREDICTED: putative BTB/POZ domain-containing protein DOT3 isoform X2 [Solanum lycopersicum]
Solyc01g110688.1.1	9641	429.042270372764	149.957160464028	-1.51656938020445	0.0155612127083309	Down	0.00482300147867048	NA	NA	NA	K08739//DNA mismatch repair protein MLH3	gi|971539159|ref|XP_015160667.1|//PREDICTED: DNA mismatch repair protein MLH3 isoform X7 [Solanum tuberosum];gi|971539165|ref|XP_015160674.1|//PREDICTED: DNA mismatch repair protein MLH3 isoform X9 [Solanum tuberosum];gi|970008023|ref|XP_015064942.1|//PREDICTED: DNA mismatch repair protein MLH3-like isoform X2 [Solanum pennellii]
Solyc01g079940.3.1	1826	156.254293652069	1636.41352878525	3.38856963093858	7.82534366178977e-17	Up	2.03888296540594e-18	NA	NA	NA	K00924;K02882//large subunit ribosomal protein L18Ae	gi|460367134|ref|XP_004229430.1|//PREDICTED: basic 7S globulin-like [Solanum lycopersicum]
Solyc08g083080.3.1	1696	169.60551300508	66.4048071445781	-1.35282347593278	0.00264012423262181	Down	0.000652551952680603	NA	GO:0016787//hydrolase activity	NA	K07019//uncharacterized protein	gi|971544178|ref|XP_015162599.1|//PREDICTED: embryogenesis-associated protein EMB8 isoform X2 [Solanum tuberosum];gi|723723770|ref|XP_010325320.1|//PREDICTED: uncharacterized protein LOC101265050 [Solanum lycopersicum]
Solyc03g032040.3.1	2551	605.402183231829	106.745797305589	-2.50371460735289	6.94459103959199e-08	Down	6.5904759157601e-09	GO:0016020//membrane;GO:0005887//integral component of plasma membrane	GO:0005355//glucose transmembrane transporter activity;GO:0005351//sugar:proton symporter activity;GO:0005215//transporter activity;GO:0016491//oxidoreductase activity	GO:0006810//transport;GO:0046323//glucose import;GO:0015992//proton transport;GO:1904659//glucose transmembrane transport	K08150//MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13	gi|657406258|ref|NP_001280690.1|//monosaccharide-sensing protein 2-like [Solanum lycopersicum]
Solyc05g026050.3.1	1790	386.589995888328	1175.92142774696	1.6049154566455	1.40419371900221e-06	Up	1.69531215739084e-07	GO:0005622//intracellular	NA	GO:0007034//vacuolar transport	K12194//charged multivesicular body protein 4	gi|460387313|ref|XP_004239323.1|//PREDICTED: vacuolar protein sorting-associated protein 32 homolog 2 [Solanum lycopersicum]
Solyc04g064570.3.1	4635	697.137260790878	1622.22475117266	1.21845906725493	1.58719895700835e-05	Up	2.35050747584396e-06	NA	NA	GO:0022613//ribonucleoprotein complex biogenesis;GO:0006412//translation	K14574//ribosome maturation protein SDO1	gi|460384036|ref|XP_004237721.1|//PREDICTED: ribosome maturation protein SBDS [Solanum lycopersicum]
Solyc08g007240.3.1	1655	894.571887661956	2428.38629625622	1.44072861017815	0.00892751527722976	Up	0.00256963892093217	NA	NA	NA	NA	gi|460398013|ref|XP_004244559.1|//PREDICTED: nudix hydrolase 8 isoform X1 [Solanum lycopersicum]
Solyc01g111830.3.1	1077	2683.12252786875	315.137443277649	-3.08985985394574	6.9609904407796e-07	Down	7.86445580214811e-08	NA	GO:0008757//S-adenosylmethionine-dependent methyltransferase activity	GO:0008202//steroid metabolic process;GO:0006730//one-carbon metabolic process	K08242//24-methylenesterol C-methyltransferase [EC:2.1.1.143]	gi|460370447|ref|XP_004231064.1|//PREDICTED: 24-methylenesterol C-methyltransferase 2-like [Solanum lycopersicum]
Solyc07g040710.3.1	1589	78.8633811356038	5467.02048846774	6.11525540712603	3.33114903988949e-19	Up	6.71742817422176e-21	NA	NA	NA	K06892//feruloyl-CoA ortho-hydroxylase [EC:1.14.11.-]	gi|970040606|ref|XP_015081689.1|//PREDICTED: IQ domain-containing protein IQM1-like [Solanum pennellii]
Solyc12g010230.2.1	1737	344.812903910333	40.4089115914949	-3.09306836695389	2.15675046767609e-12	Down	1.00891674255758e-13	NA	NA	NA	K14772//U3 small nucleolar RNA-associated protein 20	gi|460412757|ref|XP_004251764.1|//PREDICTED: uncharacterized protein LOC101246218 [Solanum lycopersicum]
Solyc04g025530.3.1	1844	105.680434152205	7950.66823125651	6.23329591629965	1.54329825458217e-26	Up	1.48991444735643e-28	NA	GO:0016831//carboxy-lyase activity;GO:0048037//cofactor binding	GO:0009064//glutamine family amino acid metabolic process	K01580//glutamate decarboxylase [EC:4.1.1.15]	gi|460383060|ref|XP_004237250.1|//PREDICTED: glutamate decarboxylase 4 [Solanum lycopersicum]
Solyc07g056000.2.1	1215	732.913236094797	8795.78472244166	3.58509797042435	7.69949933635242e-06	Up	1.07393493799876e-06	GO:0030312//external encapsulating structure;GO:0005576//extracellular region	GO:0016758//transferase activity, transferring hexosyl groups;GO:0016798//hydrolase activity, acting on glycosyl bonds	GO:0044042//glucan metabolic process	K08235//xyloglucan:xyloglucosyl transferase [EC:2.4.1.207]	gi|350535681|ref|NP_001234207.1|//xyloglycan endo-transglycosylase precursor [Solanum lycopersicum]
Solyc02g092000.3.1	1271	437.227116894346	2043.49113401995	2.22458119896244	5.17302221371792e-08	Up	4.77812324645631e-09	GO:0016021//integral component of membrane	NA	NA	K01188//beta-glucosidase [EC:3.2.1.21]	gi|460372265|ref|XP_004231951.1|//PREDICTED: uncharacterized protein At3g49720 [Solanum lycopersicum]
Solyc05g055270.1.1	606	0.483934718683943	50.9543291115395	6.71824846817347	1.95508049535034e-07	Up	2.00550973729094e-08	NA	NA	NA	NA	gi|723703133|ref|XP_010321592.1|//PREDICTED: uncharacterized protein LOC104647665 [Solanum lycopersicum]
Solyc05g021090.3.1	1545	29.0210385892575	703.659187830747	4.59970578342809	1.16782979836985e-14	Up	3.94819452483022e-16	NA	NA	NA	K12581//CCR4-NOT transcription complex subunit 7/8;K03094//S-phase kinase-associated protein 1;K13126//polyadenylate-binding protein;K01054//acylglycerol lipase [EC:3.1.1.23]	gi|723699902|ref|XP_010321093.1|//PREDICTED: transcription factor JUNGBRUNNEN 1-like [Solanum lycopersicum]
Solyc02g093690.3.1	5331	1421.75534318446	3125.14687628678	1.13625076926273	0.00106708895054896	Up	0.000238770499856322	NA	NA	GO:0070071//proton-transporting two-sector ATPase complex assembly	K07556//ATP synthase mitochondrial F1 complex assembly factor 2	gi|460371994|ref|XP_004231819.1|//PREDICTED: ATP synthase mitochondrial F1 complex assembly factor 2 [Solanum lycopersicum]
Solyc02g090450.3.1	3856	251.131682888581	640.315620205611	1.3503391531145	0.022974943352625	Up	0.00756782370684163	NA	NA	NA	K00430//peroxidase [EC:1.11.1.7]	gi|460375692|ref|XP_004233638.1|//PREDICTED: peroxidase 10-like [Solanum lycopersicum]
Solyc04g081690.2.1	3799	365.415557642518	1472.55753231292	2.01071403732888	1.07696817671531e-13	Up	4.17491763748292e-15	NA	NA	NA	K08596//sentrin-specific protease 7 [EC:3.4.22.68];K05868//cyclin B	gi|971574689|ref|XP_015170525.1|//PREDICTED: uncharacterized protein LOC107063325 [Solanum tuberosum];gi|565350348|ref|XP_006342132.1|//PREDICTED: G2/mitotic-specific cyclin-2-like [Solanum tuberosum]
Solyc01g091920.2.1	2489	286.523386838138	87.51061888047	-1.71112290564826	0.000451820789112328	Down	9.21055574644148e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13199//plasminogen activator inhibitor 1 RNA-binding protein;K12663//Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase [EC:5.3.3.-];K01183//chitinase [EC:3.2.1.14]	gi|460368012|ref|XP_004229864.1|//PREDICTED: subtilisin-like protease [Solanum lycopersicum]
Solyc02g093610.3.1	538	8.40930627344305	60.1022930793242	2.8373613398162	1.75928500619182e-06	Up	2.16926897289494e-07	NA	NA	NA	K09555	gi|460372006|ref|XP_004231825.1|//PREDICTED: BAG family molecular chaperone regulator 3 [Solanum lycopersicum]
Solyc12g036325.1.1	3852	440.513570790898	1180.35032275782	1.42195673896529	0.000332636702360564	Up	6.56891773187068e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723750291|ref|XP_004252427.2|//PREDICTED: probable serine/threonine-protein kinase At1g18390 isoform X1 [Solanum lycopersicum];gi|723750294|ref|XP_010314198.1|//PREDICTED: probable serine/threonine-protein kinase At1g18390 isoform X2 [Solanum lycopersicum]
Solyc02g093447.1.1	2630	14.6901511758119	1.14416066279705	-3.68248768830826	0.00361835140021238	Down	0.000931697162392542	NA	NA	NA	K03177//tRNA pseudouridine55 synthase [EC:5.4.99.25]	gi|460372032|ref|XP_004231838.1|//PREDICTED: uncharacterized protein LOC101259995 [Solanum lycopersicum]
Solyc05g050360.3.1	3083	238.936955279917	1960.86360469032	3.03678727572056	0.000730316129645546	Up	0.000156826868305054	NA	NA	NA	K05391//cyclic nucleotide gated channel, other eukaryote	gi|460388857|ref|XP_004240080.1|//PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X1 [Solanum lycopersicum]
Solyc01g109980.3.1	8928	1156.14397825966	355.65932807738	-1.70075316486991	5.02003750612327e-10	Down	3.39808711462646e-11	GO:0043231//intracellular membrane-bounded organelle;GO:0005634//nucleus	GO:0003677//DNA binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0006355//regulation of transcription, DNA-templated;GO:0006351//transcription, DNA-templated	K10875//DNA repair and recombination protein RAD54 and RAD54-like protein [EC:3.6.4.-]	gi|460370069|ref|XP_004230877.1|//PREDICTED: BEL1-like homeodomain protein 7 [Solanum lycopersicum]
BGI_novel_G000395	571	10.3721527495165	0.756803084083276	-3.77665357975855	0.00699534104057612	Down	0.00195401619209705	NA	NA	NA	NA	gi|971558005|ref|XP_015166083.1|//PREDICTED: uncharacterized protein LOC102590321 [Solanum tuberosum]
Solyc06g075550.3.1	1236	271.667643013117	89.9642419101655	-1.5944191510888	0.00171062491670815	Down	0.000401577297056357	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K18873//pathogen-induced protein kinase	gi|723707316|ref|XP_010322386.1|//PREDICTED: probable serine/threonine-protein kinase RLCKVII [Solanum lycopersicum]
Solyc01g111020.3.1	5589	5618.72217968771	1200.17703118211	-2.22699484220018	2.41542205021839e-11	Down	1.33159729099187e-12	NA	NA	NA	K09866//aquaporin-4	gi|723666211|ref|XP_010315358.1|//PREDICTED: pentatricopeptide repeat-containing protein MRL1, chloroplastic isoform X3 [Solanum lycopersicum];gi|723666208|ref|XP_010315357.1|//PREDICTED: pentatricopeptide repeat-containing protein MRL1, chloroplastic isoform X2 [Solanum lycopersicum];gi|460371235|ref|XP_004231448.1|//PREDICTED: pentatricopeptide repeat-containing protein MRL1, chloroplastic isoform X1 [Solanum lycopersicum]
Solyc10g054930.2.1	2290	231.505729401459	1819.88108483522	2.97472438106651	5.87705150455826e-17	Up	1.51154224621485e-18	GO:0016021//integral component of membrane	GO:0015095//magnesium ion transmembrane transporter activity	GO:0015693//magnesium ion transport;GO:1903830//magnesium ion transmembrane transport	NA	gi|460406427|ref|XP_004248666.1|//PREDICTED: probable magnesium transporter NIPA6 [Solanum lycopersicum];gi|698524880|ref|XP_009759251.1|//PREDICTED: probable magnesium transporter NIPA6 [Nicotiana sylvestris]
Solyc08g067505.1.1	705	1.60439927089165	117.908370334143	6.19948911323824	1.25577388783164e-11	Up	6.56252792135069e-13	NA	NA	NA	NA	gi|565405000|ref|XP_006367906.1|//PREDICTED: non-specific lipid-transfer protein 1-like [Solanum tuberosum]
Solyc01g091490.3.1	947	111.524481717259	414.120599486457	1.8926905245183	2.28811085085686e-06	Up	2.87335822891635e-07	NA	NA	NA	NA	gi|460367934|ref|XP_004229825.1|//PREDICTED: uncharacterized protein LOC101256125 [Solanum lycopersicum]
Solyc04g064560.3.1	4811	929.43729129569	2167.88559457523	1.22185918804903	0.000875848610377501	Up	0.000192079987101783	GO:0005634//nucleus	GO:0004527//exonuclease activity;GO:0043565//sequence-specific DNA binding;GO:0003700//transcription factor activity, sequence-specific DNA binding	GO:0006355//regulation of transcription, DNA-templated	K14570//RNA exonuclease 1 [EC:3.1.-.-]	gi|460384034|ref|XP_004237720.1|//PREDICTED: small RNA degrading nuclease 5 [Solanum lycopersicum];gi|807201009|ref|NP_001293096.1|//GRAS6 protein [Solanum lycopersicum]
Solyc07g045310.3.1	1421	808.190947339094	140.822975856972	-2.52081345687743	6.78618084544177e-06	Down	9.33896663238819e-07	GO:0009507//chloroplast	GO:0030785//[ribulose-bisphosphate carboxylase]-lysine N-methyltransferase activity	GO:0032259//methylation	K19199//histone-lysine N-methyltransferase SETD3 [EC:2.1.1.43]	gi|460396037|ref|XP_004243586.1|//PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic [Solanum lycopersicum];gi|971568958|ref|XP_015169009.1|//PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic isoform X2 [Solanum tuberosum]
Solyc04g064810.3.1	1883	975.663409118808	2988.65644719183	1.61504163733495	5.80269713918862e-11	Up	3.3858358041583e-12	NA	NA	NA	NA	gi|460384071|ref|XP_004237738.1|//PREDICTED: uncharacterized protein At2g24330-like [Solanum lycopersicum]
Solyc04g064720.3.1	2080	2249.36743555514	308.691260818478	-2.86528280015817	2.67960261059456e-12	Down	1.26748759238277e-13	GO:0016021//integral component of membrane	NA	NA	NA	gi|460384056|ref|XP_004237731.1|//PREDICTED: maltose excess protein 1-like, chloroplastic [Solanum lycopersicum]
Solyc09g090340.2.1	4194	196.185443274084	392.613300078814	1.00089104676395	0.0485187617149597	Up	0.0180525674459046	NA	NA	NA	NA	gi|460404932|ref|XP_004247932.1|//PREDICTED: uncharacterized protein LOC101263160 [Solanum lycopersicum]
Solyc02g065220.3.1	2182	1325.74934718609	413.281242110927	-1.68161224839231	0.0289104350220233	Down	0.00986181104534694	NA	NA	NA	K20556;K07409//cytochrome P450, family 1, subfamily A, polypeptide 2 [EC:1.14.14.1];K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30]	gi|970005070|ref|XP_015063366.1|//PREDICTED: geraniol 8-hydroxylase-like [Solanum pennellii];gi|976917174|gb|KVI02662.1|//cytochrome P450 [Cynara cardunculus var. scolymus]
Solyc05g010530.3.1	4031	425.469703464705	1083.31781338602	1.34832823876241	0.000686867341655091	Up	0.000146421437562452	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460387554|ref|XP_004239441.1|//PREDICTED: uncharacterized protein LOC101255197 [Solanum lycopersicum]
Solyc04g078710.2.1	2250	43.605330634583	10.7935317525682	-2.01433750491938	0.0155725608291434	Down	0.00482709914474268	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13199//plasminogen activator inhibitor 1 RNA-binding protein;K01183//chitinase [EC:3.2.1.14]	gi|723695304|ref|XP_010320326.1|//PREDICTED: subtilisin-like protease [Solanum lycopersicum]
Solyc01g088300.3.1	1065	303.791343029483	8.43629868202897	-5.17032677475664	9.58342022954781e-08	Down	9.30550532949606e-09	NA	NA	NA	K11426//SET and MYND domain-containing protein	gi|460367661|ref|XP_004229689.1|//PREDICTED: germin-like protein subfamily 1 member 17 [Solanum lycopersicum]
Solyc11g065890.2.1	2487	82.320733811227	39.7402518153724	-1.05065482824684	0.0113013792173569	Down	0.00335317498770542	NA	NA	NA	K13523//lysophosphatidic acid acyltransferase / lysophosphatidylinositol acyltransferase [EC:2.3.1.51 2.3.1.-]	gi|460411091|ref|XP_004250948.1|//PREDICTED: 1-acyl-sn-glycerol-3-phosphate acyltransferase PLS1 [Solanum lycopersicum]
Solyc10g045310.2.1	1702	860.678177741249	261.833707881995	-1.71682305160454	3.51448091266947e-06	Down	4.56798678338991e-07	NA	NA	NA	NA	gi|971537397|ref|XP_015169041.1|//PREDICTED: uncharacterized protein LOC102588626 isoform X3 [Solanum tuberosum];gi|460406759|ref|XP_004248827.1|//PREDICTED: uncharacterized protein LOC101254246 [Solanum lycopersicum]
Solyc03g111100.1.1	933	414.01996677039	2767.43468154391	2.74077701538332	2.20369973141419e-11	Up	1.20009143715377e-12	NA	NA	NA	NA	gi|460381214|ref|XP_004236347.1|//PREDICTED: uncharacterized protein LOC101267981 [Solanum lycopersicum]
Solyc06g066210.1.1	342	176.534373427647	455.469480130527	1.367405264453	6.60476584639021e-05	Up	1.11179076197623e-05	NA	NA	NA	NA	NA
Solyc01g080280.3.1	1908	66043.387131114	8219.95971124216	-3.00621088495251	8.68697085622578e-15	Down	2.88184138289882e-16	GO:0009536//plastid	GO:0016211//ammonia ligase activity;GO:0005524//ATP binding;GO:0004356//glutamate-ammonia ligase activity;GO:0032559//adenyl ribonucleotide binding	GO:0006541//glutamine metabolic process;GO:0006542//glutamine biosynthetic process	K01915//glutamine synthetase [EC:6.3.1.2]	gi|460367196|ref|XP_004229461.1|//PREDICTED: glutamine synthetase, chloroplastic [Solanum lycopersicum];gi|747086629|ref|XP_011090823.1|//PREDICTED: glutamine synthetase leaf isozyme, chloroplastic [Sesamum indicum]
Solyc10g008240.3.1	2957	197.223554669673	587.729039814129	1.57531931896949	2.75112338475408e-06	Up	3.51735247118923e-07	NA	NA	NA	K13453;K13457//disease resistance protein RPM1	gi|460405421|ref|XP_004248174.1|//PREDICTED: putative late blight resistance protein homolog R1B-12 [Solanum lycopersicum]
Solyc04g079970.3.1	1018	5429.17963108444	14182.4606857126	1.38530174170317	5.28665760826549e-06	Up	7.11180382743035e-07	NA	GO:0016879//ligase activity, forming carbon-nitrogen bonds;GO:0032559//adenyl ribonucleotide binding	GO:0006464//cellular protein modification process	K10579//ubiquitin-conjugating enzyme E2 M	gi|568214808|ref|NP_001275186.1|//NEDD8-conjugating enzyme Ubc12-like [Solanum tuberosum]
Solyc12g087790.1.1	688	158.683587226876	2050.1237592119	3.69148618122755	1.67942159966365e-24	Up	2.00318664042183e-26	NA	NA	NA	K00430//peroxidase [EC:1.11.1.7];K10839//UV excision repair protein RAD23	gi|147835211|emb|CAN61253.1|//hypothetical protein VITISV_019773 [Vitis vinifera]
Solyc10g086660.2.1	2598	1074.89018908405	154.969918909834	-2.79412917405918	9.92860225078882e-07	Down	1.16354277159982e-07	NA	NA	NA	K10418//dynein light chain LC8-type;K20826	gi|460408295|ref|XP_004249581.1|//PREDICTED: rop guanine nucleotide exchange factor 7 isoform X2 [Solanum lycopersicum]
Solyc07g006530.3.1	2515	936.241791053252	294.719955748662	-1.66753641418404	2.39690198908124e-10	Down	1.53313098749941e-11	NA	GO:0016842//amidine-lyase activity;GO:0070626//(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido)succinate AMP-lyase (fumarate-forming) activity;GO:0004018//N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity	GO:0044208//'de novo' AMP biosynthetic process;GO:0051262//protein tetramerization;GO:0009168//purine ribonucleoside monophosphate biosynthetic process;GO:0006189//'de novo' IMP biosynthetic process	K01756//adenylosuccinate lyase [EC:4.3.2.2]	gi|698570342|ref|XP_009774577.1|//PREDICTED: adenylosuccinate lyase-like [Nicotiana sylvestris];gi|460394136|ref|XP_004242661.1|//PREDICTED: adenylosuccinate lyase-like [Solanum lycopersicum]
Solyc01g091430.2.1	5440	341.098381684519	47.2653595680329	-2.85133277477387	0.000252209125372745	Down	4.84807834928898e-05	NA	GO:0005488//binding	NA	K10885//ATP-dependent DNA helicase 2 subunit 2	gi|460367924|ref|XP_004229820.1|//PREDICTED: pentatricopeptide repeat-containing protein At1g01970 [Solanum lycopersicum];gi|969996021|ref|XP_015089694.1|//PREDICTED: ATP-dependent DNA helicase 2 subunit KU80 [Solanum pennellii]
Solyc04g080730.3.1	1951	1457.16579157162	696.394290246821	-1.06518875241834	0.0261455433091014	Down	0.0087924963372116	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004702//receptor signaling protein serine/threonine kinase activity	GO:0006464//cellular protein modification process	K20535	gi|350539781|ref|NP_001233761.1|//mitogen-activated protein kinase 9 [Solanum lycopersicum]
Solyc01g102260.3.1	750	2.65535952026647	11.9726146563066	2.17275913977552	0.0360379783756373	Up	0.0127237114646651	NA	NA	NA	K09260//MADS-box transcription enhancer factor 2A;K04454//MADS-box transcription enhancer factor 2C;K19995//secretory carrier-associated membrane protein	gi|460369021|ref|XP_004230363.1|//PREDICTED: agamous-like MADS-box protein AGL80 [Solanum lycopersicum]
Solyc09g011560.2.1	1043	59.4305462178346	1512.9698334889	4.67003477166878	0.00483674089273831	Up	0.00128815094970237	NA	NA	NA	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|460401759|ref|XP_004246384.1|//PREDICTED: probable glutathione S-transferase [Solanum lycopersicum]
Solyc07g006000.3.1	832	7352.30964712709	1597.09473492133	-2.20274763623509	5.867163912909e-09	Down	4.69320626103426e-10	GO:0030529//intracellular ribonucleoprotein complex;GO:0009536//plastid	GO:0005198//structural molecule activity	GO:0010467//gene expression	K02916//large subunit ribosomal protein L35	gi|460394059|ref|XP_004242623.1|//PREDICTED: 50S ribosomal protein L35, chloroplastic [Solanum lycopersicum]
Solyc02g086670.3.1	1809	1975.96620091493	694.120013871932	-1.50930123716155	6.71038534672435e-06	Down	9.21714999354377e-07	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process	K03083//glycogen synthase kinase 3 beta [EC:2.7.11.26]	gi|460372995|ref|XP_004232308.1|//PREDICTED: shaggy-related protein kinase epsilon [Solanum lycopersicum]
Solyc02g069300.1.1	549	1.3906974420784	14.2237368805292	3.35442005296916	0.00299388114499903	Up	0.000750813789457041	NA	NA	NA	NA	gi|698450957|ref|XP_009776543.1|//PREDICTED: uncharacterized protein LOC104226288 [Nicotiana sylvestris]
Solyc10g076810.1.1	654	15.8602344482432	50.8390605647182	1.68052327426411	0.00682639931260329	Up	0.00190125449768047	NA	NA	NA	NA	gi|460407281|ref|XP_004249082.1|//PREDICTED: uncharacterized protein LOC101251234 [Solanum lycopersicum]
Solyc06g065010.3.1	1097	15.7799987318948	295.123755975783	4.22515106060107	1.11353077388827e-06	Up	1.32216244769708e-07	NA	NA	NA	K21026;K00679//phospholipid:diacylglycerol acyltransferase [EC:2.3.1.158];K10960//geranylgeranyl reductase [EC:1.3.1.83]	gi|460392485|ref|XP_004241846.1|//PREDICTED: GDSL esterase/lipase 2 [Solanum lycopersicum]
Solyc03g083480.3.1	1174	93.4883601571016	1594.45418380392	4.09213208023713	1.54754411995393e-06	Up	1.88684091858107e-07	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460378377|ref|XP_004234949.1|//PREDICTED: putative RING-H2 finger protein ATL21A [Solanum lycopersicum]
Solyc02g081420.3.1	3941	197.625677725232	87.3121669256499	-1.17851579796094	0.0209358302150339	Down	0.00679409853925849	NA	NA	NA	K10706//senataxin [EC:3.6.4.-]	gi|723673643|ref|XP_010316550.1|//PREDICTED: uncharacterized protein LOC101252144 [Solanum lycopersicum]
Solyc04g049450.3.1	2032	1004.36515808228	2035.83427704344	1.01933623973744	0.00354017434235022	Up	0.000908664101737872	GO:0043231//intracellular membrane-bounded organelle	GO:0015036//disulfide oxidoreductase activity;GO:0004576//oligosaccharyl transferase activity	GO:0019725//cellular homeostasis;GO:0018904//ether metabolic process	K09580//protein disulfide-isomerase A1 [EC:5.3.4.1]	gi|460383666|ref|XP_004237540.1|//PREDICTED: protein disulfide isomerase-like 1-4 [Solanum lycopersicum]
Solyc09g075070.3.1	1964	50.7623493848466	219.836047158087	2.11459722189988	1.34612741180657e-10	Up	8.27907495706294e-12	NA	NA	NA	K01188//beta-glucosidase [EC:3.2.1.21]	gi|460403898|ref|XP_004247423.1|//PREDICTED: beta-glucosidase 11-like [Solanum lycopersicum]
Solyc04g017700.3.1	3614	261.086020221784	96.3448427278216	-1.43824586377275	0.00243065698845782	Down	0.000594074022413817	NA	NA	NA	K03860//phosphatidylinositol glycan, class Q	gi|460381662|ref|XP_004236563.1|//PREDICTED: uncharacterized protein LOC101253473 isoform X4 [Solanum lycopersicum];gi|723688598|ref|XP_010319138.1|//PREDICTED: uncharacterized protein LOC101253473 isoform X3 [Solanum lycopersicum]
Solyc01g080180.3.1	1228	195.554169762148	407.400156694736	1.05887823650059	0.00852676113114106	Up	0.00243998602966192	NA	NA	NA	NA	gi|460367180|ref|XP_004229453.1|//PREDICTED: uncharacterized protein At5g19025-like [Solanum lycopersicum]
Solyc05g007110.2.1	2233	0.809964396317748	94.8004329856057	6.87089134548151	2.12097937271842e-11	Up	1.15188122336765e-12	NA	NA	NA	K18835//WRKY transcription factor 2;K13424//WRKY transcription factor 33	gi|723697344|ref|XP_010320666.1|//PREDICTED: probable WRKY transcription factor 72 isoform X1 [Solanum lycopersicum]
Solyc05g005260.2.1	1473	1345.54946391872	5621.86415672678	2.06285316668931	7.61023667096287e-05	Up	1.29238997587993e-05	NA	NA	NA	K07305//peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12];K12447//UDP-sugar pyrophosphorylase [EC:2.7.7.64];K16296//serine carboxypeptidase-like clade I [EC:3.4.16.-];K01592//tyrosine decarboxylase [EC:4.1.1.25];K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|460385936|ref|XP_004238656.1|//PREDICTED: uncharacterized protein LOC101248673 [Solanum lycopersicum]
Solyc05g007190.4.1	2315	583.279526360336	1673.24581568962	1.52039006628862	2.88287697170387e-07	Up	3.04642769300003e-08	GO:0005887//integral component of plasma membrane;GO:0016021//integral component of membrane	GO:0015154//disaccharide transmembrane transporter activity;GO:0008515//sucrose transmembrane transporter activity	GO:0015770//sucrose transport;GO:0015766//disaccharide transport	K15378//solute carrier family 45, member 1/2/4	gi|926234466|ref|NP_001234321.2|//sucrose transporter-like protein isoform 2 [Solanum lycopersicum]
Solyc05g006390.1.1	255	117.336636601538	716.131136771762	2.60957025210333	0.000150367484289973	Up	2.74526590894695e-05	NA	NA	NA	NA	gi|698474893|ref|XP_009784881.1|//PREDICTED: uncharacterized protein LOC104233217 [Nicotiana sylvestris]
Solyc08g061778.1.1	999	1047.63655973801	449.805984015529	-1.21976355259224	2.19736781209201e-05	Down	3.3581362865578e-06	NA	NA	NA	NA	gi|723722110|ref|XP_010325005.1|//PREDICTED: uncharacterized protein LOC101268490 isoform X2 [Solanum lycopersicum];gi|460399033|ref|XP_004245049.1|//PREDICTED: uncharacterized protein LOC101268490 isoform X1 [Solanum lycopersicum]
Solyc06g068550.3.1	1562	10.4190018781369	0.685662823994476	-3.92557396365922	0.0203949711830244	Down	0.00658343709724882	NA	NA	NA	K00924;K02882//large subunit ribosomal protein L18Ae;K01381//saccharopepsin [EC:3.4.23.25]	gi|460392136|ref|XP_004241673.1|//PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2-like [Solanum lycopersicum]
Solyc02g032420.1.1	252	18.4782634749697	1.26747005116727	-3.86580561994832	0.00308963147916224	Down	0.000778481679526071	NA	NA	NA	NA	NA
Solyc03g006510.3.1	1562	856.164006664318	2826.50340563794	1.72305934460508	2.41200072062826e-10	Up	1.5436876536897e-11	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04645//clathrin light chain B	gi|460376678|ref|XP_004234124.1|//PREDICTED: clathrin light chain 1 [Solanum lycopersicum]
Solyc09g064480.1.1	516	151.913558872862	381.587025662216	1.3287614774126	0.00278423595224507	Up	0.000692530434968367	NA	NA	NA	K20888	gi|970053192|ref|XP_015088230.1|//PREDICTED: xyloglucan galactosyltransferase KATAMARI1 [Solanum pennellii]
Solyc01g105460.3.1	1853	1402.023097382	607.978306699261	-1.20541836413451	4.47820670875559e-06	Down	5.91407722123194e-07	NA	NA	NA	K02548//1,4-dihydroxy-2-naphthoate octaprenyltransferase [EC:2.5.1.74 2.5.1.-]	gi|460369418|ref|XP_004230559.1|//PREDICTED: 1,4-dihydroxy-2-naphthoate polyprenyltransferase, chloroplastic isoform X1 [Solanum lycopersicum]
Solyc12g013830.2.1	488	18.1022432766716	130.602469715278	2.85094178276517	0.0012461548035435	Up	0.000282693385059108	NA	NA	NA	NA	gi|220683829|gb|ACL80666.1|//metallothionein [Solanum nigrum]
Solyc05g053550.3.1	1334	10541.7309612023	101.716603399366	-6.69541277561519	1.60355514000512e-47	Down	2.8092698516565e-50	NA	GO:0016747//transferase activity, transferring acyl groups other than amino-acyl groups	GO:0009699//phenylpropanoid biosynthetic process	K00660//chalcone synthase [EC:2.3.1.74]	gi|922304303|ref|NP_001234036.2|//chalcone synthase 2 [Solanum lycopersicum]
Solyc08g068710.1.1	705	79.720698008648	4009.46350120713	5.65231105304758	1.65391577929247e-19	Up	3.25506012921732e-21	NA	GO:0016407//acetyltransferase activity	NA	NA	gi|460399514|ref|XP_004245284.1|//PREDICTED: tyramine N-feruloyltransferase 4/11-like [Solanum lycopersicum]
Solyc03g095810.3.1	2600	161.506744890918	0.600739994463128	-8.07063798612317	2.11390377386251e-11	Down	1.14646264759578e-12	NA	NA	NA	K16573//gamma-tubulin complex component 6	gi|723683385|ref|XP_010318232.1|//PREDICTED: protein trichome birefringence-like 33 [Solanum lycopersicum]
Solyc03g121720.2.1	1407	2796.35079588753	1052.15694047107	-1.4101954408081	0.000682221997665141	Down	0.0001453040291732	NA	NA	NA	K18121//glyoxylate/succinic semialdehyde reductase [EC:1.1.1.79 1.1.1.-]	gi|171854591|dbj|BAG16486.1|//succinic semialdehyde reductase isofom2 [Solanum lycopersicum]
Solyc07g063200.2.1	1235	655.76929798781	2210.41265139921	1.75305546074171	0.000154441134900437	Up	2.8363332028271e-05	NA	NA	NA	K10666//E3 ubiquitin-protein ligase RNF5 [EC:2.3.2.27]	gi|460397340|ref|XP_004244225.1|//PREDICTED: E3 ubiquitin-protein ligase RMA3-like [Solanum lycopersicum]
Solyc01g104280.2.1	1170	94.9760252883799	0.531092397277708	-7.48245669394573	1.33492950519666e-09	Down	9.62335493905745e-11	NA	NA	NA	K10249//elongation of very long chain fatty acids protein 4 [EC:2.3.1.199]	gi|723664054|ref|XP_010314837.1|//PREDICTED: elongation of fatty acids protein 3-like [Solanum lycopersicum]
Solyc03g112700.1.1	993	389.965485517927	2373.06077914231	2.6053307046563	5.81546501751318e-05	Up	9.67004228534602e-06	NA	NA	NA	NA	gi|460380973|ref|XP_004236227.1|//PREDICTED: uncharacterized protein LOC101256758 [Solanum lycopersicum]
Solyc12g017280.2.1	4455	263.791519848903	116.519668559747	-1.17882468392073	0.0113992020865201	Down	0.0033834742140659	NA	NA	NA	K20403//TELO2-interacting protein 1	gi|723748936|ref|XP_010313969.1|//PREDICTED: uncharacterized protein LOC101249336 [Solanum lycopersicum]
Solyc09g065030.3.1	2558	599.801140889149	159.473498927475	-1.9111675674184	0.000892171213497604	Down	0.000196239090906865	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04427//mitogen-activated protein kinase kinase kinase 7 [EC:2.7.11.25];K16573//gamma-tubulin complex component 6	gi|460403356|ref|XP_004247157.1|//PREDICTED: protein trichome birefringence-like 11 [Solanum lycopersicum]
Solyc04g063370.2.1	1938	102.994580319242	1.89962660599343	-5.76070874538066	3.65357411280703e-06	Down	4.76375512397458e-07	NA	NA	NA	K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|723693462|ref|XP_010320012.1|//PREDICTED: serine/threonine-protein kinase At5g01020-like [Solanum lycopersicum]
Solyc06g068530.1.1	225	2.42326757541474	55.2770811134419	4.51165581672255	1.87649170180658e-09	Up	1.38787891067572e-10	NA	NA	NA	NA	NA
Solyc05g032660.3.1	1337	2777.62403163645	1170.51859705713	-1.24670347896069	8.70000421441435e-08	Down	8.39906475150334e-09	NA	NA	NA	K13606//chlorophyll(ide) b reductase [EC:1.1.1.294]	gi|723700773|ref|XP_010321272.1|//PREDICTED: chlorophyll(ide) b reductase NOL, chloroplastic isoform X4 [Solanum lycopersicum];gi|723700770|ref|XP_010321271.1|//PREDICTED: chlorophyll(ide) b reductase NOL, chloroplastic isoform X3 [Solanum lycopersicum]
Solyc04g072280.3.1	1852	29.6310833850534	485.132411014597	4.03319528633688	2.36165602403277e-06	Up	2.977158443894e-07	NA	NA	NA	K05909//laccase [EC:1.10.3.2]	gi|460384303|ref|XP_004237852.1|//PREDICTED: laccase-14-like [Solanum lycopersicum]
Solyc03g121360.1.1	612	346.447094248743	2375.22576201872	2.7773576850829	5.88682102975576e-07	Up	6.56968173665154e-08	NA	NA	GO:0016197//endosomal transport;GO:0009880//embryonic pattern specification	K12197//charged multivesicular body protein 1	gi|460379736|ref|XP_004235617.1|//PREDICTED: charged multivesicular body protein 1 [Solanum lycopersicum]
Solyc03g120370.1.1	393	4.69163208629284	0.372245634224517	-3.65576304912515	0.0310260152144051	Down	0.0107129382916489	GO:0009532//plastid stroma;GO:0009509//chromoplast	GO:0032559//adenyl ribonucleotide binding;GO:0016462//pyrophosphatase activity	NA	NA	gi|108773172|ref|YP_635682.1|//Ycf2 [Solanum tuberosum]
Solyc03g062710.3.1	4222	963.633893095874	242.837891901148	-1.98849158300245	0.000213198888288783	Down	4.03542550592829e-05	NA	NA	NA	NA	gi|460378075|ref|XP_004234804.1|//PREDICTED: uncharacterized protein LOC101262788 [Solanum lycopersicum]
Solyc08g066810.3.1	2220	315.179567717092	65.0279763229295	-2.27704157883017	0.000399266280099271	Down	8.03205648462712e-05	NA	GO:0043167//ion binding;GO:0016798//hydrolase activity, acting on glycosyl bonds	GO:0044238//primary metabolic process	K01179//endoglucanase [EC:3.2.1.4]	gi|460399297|ref|XP_004245178.1|//PREDICTED: uncharacterized protein LOC101258288 [Solanum lycopersicum]
Solyc01g109040.3.1	788	12149.1905097674	855.094525450678	-3.82863247136963	7.33756760545658e-14	Down	2.78153654940709e-15	NA	NA	NA	NA	gi|697118596|ref|XP_009613230.1|//PREDICTED: uncharacterized protein LOC104106393 [Nicotiana tomentosiformis]
Solyc04g076090.3.1	2465	3994.06181251951	766.140629588146	-2.38217552358181	1.39710003517813e-11	Down	7.33753522277467e-13	GO:0044424//intracellular part	GO:0032559//adenyl ribonucleotide binding;GO:0016861//intramolecular oxidoreductase activity, interconverting aldoses and ketoses;GO:0003676//nucleic acid binding	GO:0006007//glucose catabolic process;GO:0002376//immune system process	K01810//glucose-6-phosphate isomerase [EC:5.3.1.9]	gi|927442675|ref|NP_001234583.2|//glucose-6-phosphate isomerase 1 [Solanum lycopersicum]
Solyc01g080920.3.1	1619	1.37135197473717	15.4538898913888	3.49429921434366	0.0148505510062168	Up	0.00457610413719308	NA	NA	NA	K10260//F-box and WD-40 domain protein 7;K08332//vacuolar protein 8	gi|723659125|ref|XP_004229574.2|//PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Solanum lycopersicum]
Solyc06g060750.3.1	2180	394.591131810415	175.171671785401	-1.17158904707999	0.00037473831349646	Down	7.47576954611993e-05	NA	NA	NA	K00799//glutathione S-transferase [EC:2.5.1.18];K13506//glycerol-3-phosphate O-acyltransferase 3/4 [EC:2.3.1.15];K11797//PH-interacting protein;K17982//geranyllinalool synthase [EC:4.2.3.144];K18660//malonyl-CoA/methylmalonyl-CoA synthetase [EC:6.2.1.-]	gi|460392793|ref|XP_004241998.1|//PREDICTED: uncharacterized protein At1g04910-like [Solanum lycopersicum]
Solyc05g018190.1.1	768	4.49730563653269	26.8315971888725	2.57680009773143	0.00304876871756243	Up	0.000766396907381878	NA	NA	NA	NA	NA
Solyc03g082690.3.1	3370	1291.38343960797	7927.04327988004	2.61786542166715	0.000133604524997214	Up	2.40884556214226e-05	NA	GO:0004842//ubiquitin-protein transferase activity	GO:0016567//protein ubiquitination	K08332//vacuolar protein 8	gi|460378717|ref|XP_004235115.1|//PREDICTED: U-box domain-containing protein 43 [Solanum lycopersicum]
Solyc06g034320.1.1	1129	117.986407072617	261.814356472139	1.14992354921484	0.00492665583177934	Up	0.0013143013190713	NA	NA	NA	NA	gi|723705271|ref|XP_010322006.1|//PREDICTED: uncharacterized protein LOC101247924 [Solanum lycopersicum]
Solyc06g051760.3.1	2345	921.9990516279	427.48476054078	-1.10889227659905	0.000753907361867543	Down	0.000162567246473973	NA	GO:0016740//transferase activity	NA	K00685//arginine-tRNA-protein transferase [EC:2.3.2.8]	gi|460390662|ref|XP_004240947.1|//PREDICTED: arginyl-tRNA--protein transferase 1 [Solanum lycopersicum]
Solyc12g096770.1.1	1326	6738.26466456921	997.888442040972	-2.75542665052272	0.000124282394189512	Down	2.22108283049446e-05	NA	NA	NA	K13065//shikimate O-hydroxycinnamoyltransferase [EC:2.3.1.133]	gi|460415372|ref|XP_004253033.1|//PREDICTED: acetyl-CoA-benzylalcohol acetyltransferase-like [Solanum lycopersicum]
Solyc00g006680.2.1	228	54.2222350641908	299.201581903517	2.46416131486065	0.0202199374459736	Up	0.00651939984000565	NA	NA	NA	NA	gi|970066912|ref|XP_015060514.1|//PREDICTED: uncharacterized protein LOC107006481 [Solanum pennellii]
Solyc03g118840.3.1	795	4145.92612349667	18746.8523545617	2.1768820693587	2.32095887946134e-09	Up	1.74236289817919e-10	NA	NA	NA	K10635//E3 ubiquitin-protein ligase Arkadia [EC:2.3.2.27];K13448//calcium-binding protein CML;K19041//E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27]	gi|460380100|ref|XP_004235796.1|//PREDICTED: uncharacterized protein LOC101251666 [Solanum lycopersicum];gi|460380152|ref|XP_004235822.1|//PREDICTED: calcium-binding allergen Ole e 8-like [Solanum lycopersicum]
Solyc10g080690.2.1	1641	386.718942470579	1354.11257703324	1.80799034731283	0.000769081940408099	Up	0.000166269392215856	NA	NA	GO:0008152//metabolic process	NA	gi|460407729|ref|XP_004249303.1|//PREDICTED: patatin-like protein 3 [Solanum lycopersicum]
Solyc07g007280.3.1	811	703.812678453057	55.3791562123094	-3.66777652569245	4.57848818092366e-11	Down	2.62135002456342e-12	NA	NA	NA	NA	gi|460394250|ref|XP_004242717.1|//PREDICTED: uncharacterized protein LOC101254005 [Solanum lycopersicum]
Solyc02g078450.3.1	1796	671.545924944087	171.442371071938	-1.9697623565291	6.77516720832084e-05	Down	1.14148485841696e-05	NA	NA	NA	K14454//aspartate aminotransferase, cytoplasmic [EC:2.6.1.1];K17345//tetraspanin-5;K17353//tetraspanin-18	gi|460374117|ref|XP_004232858.1|//PREDICTED: tetraspanin-19 [Solanum lycopersicum]
Solyc01g090190.3.1	1681	6288.45727490757	3105.75609548973	-1.01776159428798	0.000145190929543222	Down	2.63993348110868e-05	NA	NA	NA	K13199//plasminogen activator inhibitor 1 RNA-binding protein	gi|460367766|ref|XP_004229741.1|//PREDICTED: plasminogen activator inhibitor 1 RNA-binding protein-like [Solanum lycopersicum]
Solyc08g061480.3.1	2302	312.219832916587	3432.66165732005	3.45869357544225	3.87502544542628e-18	Up	8.65193171988349e-20	NA	NA	NA	NA	gi|460399014|ref|XP_004245040.1|//PREDICTED: fatty-acid-binding protein 2 isoform X1 [Solanum lycopersicum];gi|723722062|ref|XP_010324996.1|//PREDICTED: fatty-acid-binding protein 2 isoform X2 [Solanum lycopersicum];gi|723722065|ref|XP_010324997.1|//PREDICTED: fatty-acid-binding protein 2 isoform X3 [Solanum lycopersicum]
Solyc11g011605.1.1	366	0.759071376494268	11.917407451645	3.97269106096751	0.00368085035558392	Up	0.000949848181441311	NA	NA	NA	K14488//SAUR family protein;K09494//T-complex protein 1 subunit beta	gi|971559284|ref|XP_015166412.1|//PREDICTED: auxin-responsive protein SAUR68-like [Solanum tuberosum]
Solyc03g121260.3.1	2226	2088.198197739	784.992680376019	-1.41150754248029	1.1962758848822e-05	Down	1.72342563555602e-06	NA	GO:0008168//methyltransferase activity;GO:0003676//nucleic acid binding	GO:0016070//RNA metabolic process;GO:0010467//gene expression;GO:0006730//one-carbon metabolic process;GO:0009451//RNA modification	K00599//methyltransferase-like protein 6 [EC:2.1.1.-];K15332//tRNA (uracil-5-)-methyltransferase [EC:2.1.1.-]	gi|460379752|ref|XP_004235625.1|//PREDICTED: tRNA (uracil(54)-C(5))-methyltransferase homolog-B [Solanum lycopersicum]
Solyc04g011750.3.1	696	1.91697607593729	371.506867998303	7.5984127395646	4.06916592995991e-25	Up	4.44410920485408e-27	NA	NA	NA	NA	gi|460381992|ref|XP_004236724.1|//PREDICTED: histone H3.v1-like [Solanum lycopersicum]
Solyc03g119300.3.1	1174	26.6116070561195	5.03441576264512	-2.40215936613477	0.0347108005363027	Down	0.0121818014938547	NA	GO:0046872//metal ion binding	NA	K16276//zinc finger protein-like protein	gi|723685701|ref|XP_010318620.1|//PREDICTED: uncharacterized protein LOC101263990 isoform X2 [Solanum lycopersicum]
Solyc04g007990.1.1	213	107.507309027395	425.236475300209	1.98383060483011	5.40581508758406e-11	Up	3.13274256502761e-12	NA	NA	NA	NA	gi|723690199|ref|XP_010319387.1|//PREDICTED: uncharacterized protein LOC104646728 [Solanum lycopersicum]
Solyc08g006770.3.1	1436	152.328720098424	4101.81113078796	4.75100118529067	6.43544276101194e-13	Up	2.78498175247311e-14	NA	NA	NA	K05278//flavonol synthase [EC:1.14.11.23];K05277//leucoanthocyanidin dioxygenase [EC:1.14.11.19]	gi|460397939|ref|XP_004244522.1|//PREDICTED: probable 2-oxoglutarate/Fe(II)-dependent dioxygenase [Solanum lycopersicum]
Solyc02g014450.2.1	2594	114.970354719635	35.1910833591842	-1.7079800746975	0.0387728049958877	Down	0.0138598180971583	NA	NA	NA	K18469//TBC1 domain family member 5	gi|723667411|ref|XP_010315561.1|//PREDICTED: uncharacterized protein LOC101261558 isoform X2 [Solanum lycopersicum];gi|460371320|ref|XP_004231488.1|//PREDICTED: uncharacterized protein LOC101261558 isoform X1 [Solanum lycopersicum]
Solyc06g036290.3.1	3760	1428.11959179519	4001.44470377245	1.48640417588641	0.0358770042501902	Up	0.0126521670348535	GO:0044424//intracellular part	GO:0005515//protein binding;GO:0032559//adenyl ribonucleotide binding	GO:0044267//cellular protein metabolic process;GO:0050896//response to stimulus	K04079//molecular chaperone HtpG	gi|460390179|ref|XP_004240717.1|//PREDICTED: heat shock protein 83-like [Solanum lycopersicum]
Solyc01g008780.3.1	1346	1606.98381607694	361.852487799096	-2.15088180417919	9.47595096659743e-07	Down	1.10424328732423e-07	NA	NA	NA	NA	gi|460365219|ref|XP_004228501.1|//PREDICTED: uncharacterized protein LOC101259869 [Solanum lycopersicum]
Solyc01g107830.3.1	1444	21.8889134732005	871.422574881202	5.31510023928843	1.4629847176861e-15	Up	4.40073306684317e-17	NA	GO:0016757//transferase activity, transferring glycosyl groups	NA	K13496//UDP-glucosyl transferase 73C [EC:2.4.1.-]	gi|460369831|ref|XP_004230760.1|//PREDICTED: scopoletin glucosyltransferase-like [Solanum lycopersicum]
Solyc10g081420.2.1	6066	294.9629173123	133.679498752712	-1.141755361536	0.000697160238208397	Down	0.000148927438689888	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460407856|ref|XP_004249365.1|//PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 isoform X2 [Solanum lycopersicum]
Solyc05g005700.3.1	1887	105.531164958048	579.685585098562	2.45760149926729	1.1638769875846e-06	Up	1.38695196410764e-07	NA	NA	NA	K00128//aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]	gi|460385976|ref|XP_004238676.1|//PREDICTED: aldehyde dehydrogenase family 2 member B7, mitochondrial [Solanum lycopersicum]
Solyc07g008930.1.1	600	3.12918353200711	425.718672160553	7.08797028074868	6.7926004394854e-24	Up	8.55784608821404e-26	NA	NA	NA	NA	gi|971576037|ref|XP_015170874.1|//PREDICTED: uncharacterized protein LOC107063476 [Solanum tuberosum]
Solyc07g065450.3.1	2320	64.2136669071574	23.3835680859548	-1.45738529911367	0.028589125586192	Down	0.00973573323972904	GO:0031224//intrinsic component of membrane	GO:0005261//cation channel activity	GO:0034220//ion transmembrane transport;GO:0030001//metal ion transport	K05389//potassium channel subfamily K, other eukaryote	gi|460397015|ref|XP_004244064.1|//PREDICTED: two-pore potassium channel 1 [Solanum lycopersicum]
Solyc06g068910.3.1	5003	247.20488133624	84.1817825559382	-1.55412726684981	0.0284859232360157	Down	0.00969846514230533	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460392081|ref|XP_004241646.1|//PREDICTED: probable inactive receptor kinase At1g48480 [Solanum lycopersicum]
Solyc03g064010.3.1	1699	182.462083688329	25.8858597119711	-2.81736055926527	0.00272594771015094	Down	0.000676406512094633	NA	GO:0003824//catalytic activity	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13418//somatic embryogenesis receptor kinase 1 [EC:2.7.10.1 2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460378159|ref|XP_004234843.1|//PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830 [Solanum lycopersicum]
Solyc06g074850.3.1	1897	65.0578698306125	25.7138569114191	-1.33917756416003	0.0189389028711549	Down	0.00604000495622488	NA	GO:0004180//carboxypeptidase activity	GO:0019538//protein metabolic process	K16298//serine carboxypeptidase-like clade IV [EC:3.4.16.-]	gi|460391363|ref|XP_004241292.1|//PREDICTED: serine carboxypeptidase-like [Solanum lycopersicum]
Solyc01g105120.3.1	4129	6447.16910333498	402.594134536219	-4.00126776590072	3.01601610174817e-70	Down	1.01178414029125e-73	NA	NA	NA	NA	gi|723664398|ref|XP_010315092.1|//PREDICTED: uncharacterized protein LOC101244909 isoform X2 [Solanum lycopersicum];gi|723664389|ref|XP_010315088.1|//PREDICTED: uncharacterized protein LOC101244909 isoform X1 [Solanum lycopersicum]
Solyc03g093410.3.1	1797	11.6704032607048	205.010115780903	4.13476878005428	4.18194292588511e-09	Up	3.26256394210435e-10	GO:0031224//intrinsic component of membrane	GO:0015291//secondary active transmembrane transporter activity;GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	GO:0071702//organic substance transport;GO:0008152//metabolic process	K16055//trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12];K08150//MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13	gi|460378840|ref|XP_004235176.1|//PREDICTED: hexose carrier protein HEX6 [Solanum lycopersicum]
Solyc10g047140.2.1	2677	816.187820143547	4955.39799043491	2.6020278446983	6.96580090776969e-13	Up	3.03267312519569e-14	NA	NA	NA	K13416//brassinosteroid insensitive 1-associated receptor kinase 1 [EC:2.7.10.1 2.7.11.1]	gi|350540048|ref|NP_001234626.1|//somatic embryogenesis receptor kinase 3A precursor [Solanum lycopersicum]
Solyc07g053165.1.1	2861	1659.70709259105	3584.14747015879	1.11070134325443	6.62059570024889e-06	Up	9.08641470415849e-07	NA	NA	NA	K13414//mitogen-activated protein kinase kinase kinase 1, plant [EC:2.7.11.25]	gi|723715498|ref|XP_010323778.1|//PREDICTED: mitogen-activated protein kinase kinase kinase 1-like [Solanum lycopersicum]
Solyc05g016230.3.1	1893	541.113879037591	204.783249981513	-1.40183452897546	0.000320245167209885	Down	6.30391653509543e-05	GO:0031436//BRCA1-BARD1 complex;GO:0005886//plasma membrane;GO:0070531//BRCA1-A complex	GO:0008270//zinc ion binding;GO:0004842//ubiquitin-protein transferase activity	GO:0016567//protein ubiquitination;GO:0042127//regulation of cell proliferation;GO:0035067//negative regulation of histone acetylation;GO:0071158//positive regulation of cell cycle arrest;GO:0045944//positive regulation of transcription from RNA polymerase II promoter;GO:0045717//negative regulation of fatty acid biosynthetic process;GO:0035066//positive regulation of histone acetylation;GO:0000724//double-strand break repair via homologous recombination	K10683//BRCA1-associated RING domain protein 1	gi|460387147|ref|XP_004239249.1|//PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Solanum lycopersicum]
Solyc02g078480.3.1	1395	1187.35079714022	4727.61888420731	1.99336750237113	3.07734429806733e-10	Up	2.01309797342633e-11	NA	NA	NA	NA	gi|460374107|ref|XP_004232853.1|//PREDICTED: CBS domain-containing protein CBSX5-like [Solanum lycopersicum]
Solyc12g044930.2.1	1002	261.483144602051	811.272000199461	1.63346774459506	0.00590001551472274	Up	0.00161377343995212	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K16219//protein N-terminal methyltransferase [EC:2.1.1.244];K08235//xyloglucan:xyloglucosyl transferase [EC:2.4.1.207]	gi|723751136|ref|XP_004252380.2|//PREDICTED: F-box protein PP2-B10 [Solanum lycopersicum]
Solyc04g006980.1.1	1128	41.3784665169847	8.99115738820454	-2.20230143605219	0.0423715003758366	Down	0.0153973370047723	NA	NA	NA	NA	gi|350539976|ref|NP_001234598.1|//TCP transcription factor 22 [Solanum lycopersicum]
Solyc04g074870.3.1	1377	488.006996278495	168.190004442797	-1.53680986247599	0.00144037178002082	Down	0.000331798777416455	GO:0016020//membrane	NA	NA	K15272//solute carrier family 35 (UDP-sugar transporter), member A1/2/3	gi|460384525|ref|XP_004237961.1|//PREDICTED: purine permease 1-like [Solanum lycopersicum]
Solyc04g015160.3.1	4154	398.372835886038	1470.24964040661	1.88386995578127	1.85965152508512e-08	Up	1.59014484812333e-09	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723689042|ref|XP_010319216.1|//PREDICTED: C2 and GRAM domain-containing protein At1g03370 [Solanum lycopersicum]
Solyc02g084530.2.1	1089	0.367945849227932	5.40942961064327	3.87791111433641	0.0189376254555135	Up	0.00603889167183234	NA	NA	NA	NA	gi|970006195|ref|XP_015063947.1|//PREDICTED: transmembrane and coiled-coil domain-containing protein 4-like [Solanum pennellii]
Solyc05g008235.1.1	711	69.6481920182701	1.50117273257634	-5.53592400725892	9.64734797016899e-10	Down	6.81801541353824e-11	GO:0043231//intracellular membrane-bounded organelle	GO:0003676//nucleic acid binding	NA	K09422//myb proto-oncogene protein, plant	gi|460386328|ref|XP_004238850.1|//PREDICTED: myb-related protein Hv1 [Solanum lycopersicum]
Solyc06g082300.3.1	1895	631.084244160495	119.210382535889	-2.40432271340239	1.81984433046204e-12	Down	8.4181706206329e-14	NA	NA	NA	K13691//pathogen-inducible salicylic acid glucosyltransferase [EC:2.4.1.-]	gi|460393803|ref|XP_004242498.1|//PREDICTED: UDP-glycosyltransferase 87A1 [Solanum lycopersicum]
Solyc05g018130.3.1	1811	446.092281859304	147.659822195928	-1.59506486088176	1.46417155388335e-05	Down	2.15576175556853e-06	NA	GO:0005506//iron ion binding;GO:0051213//dioxygenase activity;GO:0016491//oxidoreductase activity	GO:0055114//oxidation-reduction process	K04124//gibberellin 3-beta-dioxygenase [EC:1.14.11.15];K06901//putative MFS transporter, AGZA family, xanthine/uracil permease;K04125//gibberellin 2-oxidase [EC:1.14.11.13];K06892//feruloyl-CoA ortho-hydroxylase [EC:1.14.11.-]	gi|460387179|ref|XP_004239264.1|//PREDICTED: probable iron/ascorbate oxidoreductase DDB_G0283291 [Solanum lycopersicum];gi|970026240|ref|XP_015074430.1|//PREDICTED: probable iron/ascorbate oxidoreductase DDB_G0283291 [Solanum pennellii]
Solyc02g085360.3.1	2151	31.8043176377463	252.575212232992	2.98941852086187	1.94667065000452e-05	Up	2.93800114129577e-06	NA	NA	NA	K09587//steroid 22-alpha-hydroxylase [EC:1.14.13.-]	gi|902763327|ref|NP_001266259.2|//cytochrome P450 90B3 [Solanum lycopersicum]
Solyc01g109655.1.1	1247	8742.99330907476	3966.94279024846	-1.14009970329392	0.000535022505634254	Down	0.000110981073648972	NA	GO:0005488//binding	NA	K12741//heterogeneous nuclear ribonucleoprotein A1/A3;K13195//cold-inducible RNA-binding protein;K13098//RNA-binding protein FUS	gi|460371184|ref|XP_004231423.1|//PREDICTED: transcription factor RADIALIS [Solanum lycopersicum];gi|685341703|ref|XP_009107498.1|//PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial [Brassica rapa]
Solyc08g081610.3.1	1059	11.5638115846552	327.531228178995	4.82394355307444	3.15368349707019e-15	Up	9.85085273052342e-17	NA	NA	NA	K13426//WRKY transcription factor 29;K13425//WRKY transcription factor 22	gi|460400081|ref|XP_004245564.1|//PREDICTED: probable WRKY transcription factor 29 [Solanum lycopersicum]
Solyc02g077290.2.1	4680	18.2417060031174	1519.86753127886	6.38056111668836	5.09474375266287e-19	Up	1.04637088404549e-20	NA	NA	NA	K05387//glutamate receptor, ionotropic, plant	gi|460376114|ref|XP_004233845.1|//PREDICTED: glutamate receptor 2.9 [Solanum lycopersicum]
Solyc07g066390.1.1	1734	792.818336413612	77.2090090851978	-3.36014922736188	1.15793840266863e-07	Down	1.14076010073549e-08	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial;K17710//pentatricopeptide repeat domain-containing protein 1	gi|460396860|ref|XP_004243988.1|//PREDICTED: pentatricopeptide repeat-containing protein At1g79080, chloroplastic [Solanum lycopersicum]
Solyc05g044470.2.1	1307	116.469746839804	36.1867644157962	-1.68642123950831	0.000236379254220015	Down	4.51118898764901e-05	NA	NA	NA	K14009//B-cell receptor-associated protein 31	gi|460389003|ref|XP_004240151.1|//PREDICTED: uncharacterized protein LOC101249367 [Solanum lycopersicum]
Solyc03g005670.3.1	2573	24.42285685917	152.421929831817	2.6417666124177	0.000126239281122561	Up	2.26240667823644e-05	NA	NA	NA	K13457//disease resistance protein RPM1	gi|460376522|ref|XP_004234047.1|//PREDICTED: disease resistance RPP8-like protein 3 [Solanum lycopersicum]
Solyc01g005130.2.1	1166	1009.69092906495	454.208002014841	-1.1524887170339	7.52984311078647e-05	Down	1.27733397931971e-05	NA	GO:0046872//metal ion binding;GO:0005488//binding	NA	K10773//endonuclease III [EC:4.2.99.18]	gi|460365728|ref|XP_004228749.1|//PREDICTED: zinc finger protein 4-like [Solanum lycopersicum]
Solyc04g008100.2.1	1257	69.771115477237	4797.3890831262	6.10347574194738	5.18502613410942e-15	Up	1.65631705566266e-16	NA	NA	NA	K10260//F-box and WD-40 domain protein 7;K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K08332//vacuolar protein 8	gi|460382392|ref|XP_004236923.1|//PREDICTED: U-box domain-containing protein 21-like [Solanum lycopersicum]
Solyc11g067050.3.1	3406	1082.16255393509	316.266989402889	-1.77470233924665	1.05214930652157e-11	Down	5.45526944003095e-13	NA	GO:0033926//glycopeptide alpha-N-acetylgalactosaminidase activity	NA	K02986//small subunit ribosomal protein S4;K11593//eukaryotic translation initiation factor 2C	gi|460411261|ref|XP_004251032.1|//PREDICTED: alkaline/neutral invertase CINV1 [Solanum lycopersicum]
Solyc04g008650.3.1	3761	292.327052925688	65.7857857996203	-2.1517355445851	0.00382164958849787	Down	0.00098988530604114	GO:0016020//membrane	GO:0016301//kinase activity;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723690024|ref|XP_004237180.2|//PREDICTED: inactive leucine-rich repeat receptor-like serine/threonine-protein kinase At1g60630 [Solanum lycopersicum]
Solyc02g092670.1.1	2265	2416.90446947033	97.9927894140297	-4.62434104450159	4.02155003818629e-11	Down	2.28599366640603e-12	NA	GO:0004175//endopeptidase activity;GO:0005515//protein binding	GO:0044092//negative regulation of molecular function;GO:0019538//protein metabolic process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13199//plasminogen activator inhibitor 1 RNA-binding protein;K12663//Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase [EC:5.3.3.-];K01183//chitinase [EC:3.2.1.14]	gi|460372166|ref|XP_004231903.1|//PREDICTED: subtilisin-like protease [Solanum lycopersicum]
Solyc01g087980.3.1	1183	293.992910596529	2543.79085200235	3.11312678736325	7.72694668930313e-05	Up	1.3150901514596e-05	NA	NA	NA	NA	gi|698481732|ref|XP_009787835.1|//PREDICTED: protein BPS1, chloroplastic-like [Nicotiana sylvestris]
Solyc06g051080.3.1	3110	3510.94200604053	543.458342623308	-2.69161680729724	1.6100064823953e-13	Down	6.39729726492244e-15	NA	GO:0016772//transferase activity, transferring phosphorus-containing groups	NA	K12447//UDP-sugar pyrophosphorylase [EC:2.7.7.64]	gi|460390596|ref|XP_004240914.1|//PREDICTED: uncharacterized protein LOC101246145 [Solanum lycopersicum]
Solyc09g065160.3.1	2725	1505.81437823757	647.637274707172	-1.2172860125988	3.60465829325361e-05	Down	5.74799768098216e-06	NA	NA	NA	NA	gi|723730405|ref|XP_010326373.1|//PREDICTED: uncharacterized protein LOC101255731 isoform X2 [Solanum lycopersicum];gi|460403368|ref|XP_004247163.1|//PREDICTED: uncharacterized protein LOC101255731 isoform X1 [Solanum lycopersicum]
Solyc01g094550.3.1	3415	1350.15846260807	12979.6049463907	3.265045827857	1.69111456346851e-52	Up	1.76499208950045e-55	NA	NA	GO:0006732//coenzyme metabolic process	K01068//acyl-coenzyme A thioesterase 1/2/4 [EC:3.1.2.2]	gi|697103382|ref|XP_009605510.1|//PREDICTED: acyl-coenzyme A thioesterase 8-like isoform X1 [Nicotiana tomentosiformis];gi|460368083|ref|XP_004229899.1|//PREDICTED: acyl-coenzyme A thioesterase 8 isoform X1 [Solanum lycopersicum]
Solyc04g079780.3.1	1139	7715.82348427532	2137.0318355594	-1.85221173895649	4.1420216002333e-08	Down	3.7717902077568e-09	NA	NA	NA	K02996//small subunit ribosomal protein S9;K11968//ariadne-1 [EC:2.3.2.27]	gi|460385037|ref|XP_004238212.1|//PREDICTED: probable E3 ubiquitin-protein ligase ARI2 [Solanum lycopersicum];gi|460385039|ref|XP_004238213.1|//PREDICTED: 30S ribosomal protein S9, chloroplastic [Solanum lycopersicum]
Solyc08g065860.3.1	1801	258.57533852889	646.735332093872	1.32259074355498	8.88514622417847e-07	Up	1.02933630776602e-07	NA	NA	NA	NA	gi|460399189|ref|XP_004245124.1|//PREDICTED: uncharacterized protein LOC101267146 [Solanum lycopersicum]
Solyc12g005400.2.1	2064	5070.02772471649	545.038223253744	-3.2175643223998	2.70408880505071e-24	Down	3.29594840931706e-26	NA	NA	NA	K05391//cyclic nucleotide gated channel, other eukaryote	gi|460412202|ref|XP_004251491.1|//PREDICTED: cyclic nucleotide-gated ion channel 4 [Solanum lycopersicum]
Solyc10g081910.2.1	3318	719.531752664716	91.7119882056282	-2.97187611966665	2.85849924448884e-10	Down	1.85395433331243e-11	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K00924	gi|460407937|ref|XP_004249405.1|//PREDICTED: probable receptor protein kinase TMK1 [Solanum lycopersicum]
Solyc09g065750.3.1	1107	0.752648392244036	19.1888776411128	4.67215046859757	0.000168124321304842	Up	3.11206716713823e-05	NA	NA	NA	K17911//beta-carotene isomerase [EC:5.2.1.14]	gi|460403714|ref|XP_004247333.1|//PREDICTED: beta-carotene isomerase D27, chloroplastic [Solanum lycopersicum]
Solyc11g008420.2.1	734	129.763889687785	293.060104940203	1.17530761317189	0.00129852018666491	Up	0.000295589040553251	NA	NA	NA	K03094//S-phase kinase-associated protein 1	gi|460409262|ref|XP_004250058.1|//PREDICTED: SKP1-like protein 11 [Solanum lycopersicum]
Solyc02g085770.3.1	1689	110.876353922655	28.9735570665323	-1.93614300211816	0.0325361236477485	Down	0.011328460227882	NA	NA	NA	NA	gi|971578732|ref|XP_015158789.1|//PREDICTED: uncharacterized protein LOC102578503 isoform X2 [Solanum tuberosum];gi|460373125|ref|XP_004232373.1|//PREDICTED: ultraviolet-B receptor UVR8-like [Solanum lycopersicum]
Solyc01g110190.3.1	3639	288.848394225357	669.792474731147	1.21340169270609	0.000545123950677697	Up	0.000113386035772955	NA	NA	NA	K11498//centromeric protein E	gi|723666011|ref|XP_010315328.1|//PREDICTED: kinesin-related protein 4 isoform X2 [Solanum lycopersicum];gi|723666006|ref|XP_010315327.1|//PREDICTED: kinesin-related protein 4 isoform X1 [Solanum lycopersicum]
Solyc02g068300.3.1	2611	218.431396352081	722.411580637105	1.72564078246789	0.0092903775287604	Up	0.00269139757542589	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460374962|ref|XP_004233277.1|//PREDICTED: probable L-type lectin-domain containing receptor kinase S.5 [Solanum lycopersicum]
Solyc09g007270.3.1	1245	370.084717598184	32.5134321114784	-3.50874780195454	6.01484339659093e-08	Down	5.64760344267652e-09	NA	GO:0016209//antioxidant activity;GO:0005506//iron ion binding	GO:0008152//metabolic process;GO:0006950//response to stress	K00434//L-ascorbate peroxidase [EC:1.11.1.11]	gi|970050091|ref|XP_015086564.1|//PREDICTED: L-ascorbate peroxidase 2, cytosolic [Solanum pennellii]
Solyc06g065330.3.1	3536	672.323106298544	65.7548007137603	-3.35398659918875	3.92133785289386e-23	Down	5.27658776239259e-25	NA	NA	NA	K15692//E3 ubiquitin-protein ligase RNF13 [EC:2.3.2.27]	gi|460392451|ref|XP_004241829.1|//PREDICTED: receptor homology region, transmembrane domain- and RING domain-containing protein 2 [Solanum lycopersicum]
Solyc06g008810.3.1	2042	570.374474489648	98.0506543546059	-2.54031025586789	9.64762454316047e-09	Down	7.93300273677203e-10	NA	GO:0043178//alcohol binding	GO:0009755//hormone-mediated signaling pathway	K14485//transport inhibitor response 1	gi|565394679|ref|XP_006362984.1|//PREDICTED: protein TRANSPORT INHIBITOR RESPONSE 1-like isoform X2 [Solanum tuberosum]
Solyc11g072170.2.1	1904	357.795930070957	110.389347224111	-1.69653602072844	7.44021188312008e-08	Down	7.10797042509198e-09	NA	NA	NA	K03834//tyrosine-specific transport protein	gi|460411699|ref|XP_004251243.1|//PREDICTED: uncharacterized protein LOC101267772 isoform X1 [Solanum lycopersicum]
Solyc01g010390.3.1	2128	365.491141834632	971.086415407298	1.40976324348952	0.000248203934063852	Up	4.76461257055628e-05	NA	GO:0015926//glucosidase activity;GO:0043167//ion binding	GO:0044238//primary metabolic process	K01188//beta-glucosidase [EC:3.2.1.21]	gi|460365025|ref|XP_004228406.1|//PREDICTED: beta-glucosidase 40 [Solanum lycopersicum]
Solyc04g082380.3.1	1148	177.144800137943	491.569998612737	1.47246775057952	4.41110365918776e-05	Up	7.1276779344636e-06	NA	NA	NA	NA	gi|460385465|ref|XP_004238424.1|//PREDICTED: uncharacterized protein LOC101257560 [Solanum lycopersicum]
Solyc01g008180.3.1	2388	556.635889437367	224.584064932959	-1.30947836346802	0.0141543500746044	Down	0.0043273437942413	NA	NA	NA	NA	gi|460365288|ref|XP_004228535.1|//PREDICTED: uncharacterized protein LOC101245575 [Solanum lycopersicum]
Solyc09g061420.3.1	3030	718.573065434301	310.286533070899	-1.21153377626435	0.00267364084799374	Down	0.000662032061772118	NA	NA	NA	NA	gi|460403221|ref|XP_004247092.1|//PREDICTED: uncharacterized protein LOC101258991 [Solanum lycopersicum];gi|971580877|ref|XP_015159348.1|//PREDICTED: uncharacterized protein LOC102594307 isoform X1 [Solanum tuberosum]
Solyc10g011770.3.1	1301	7808.64810592063	2245.48925929433	-1.79804297798245	1.59444351263572e-08	Down	1.3514852198202e-09	NA	NA	NA	NA	gi|460405212|ref|XP_004248070.1|//PREDICTED: protein CURVATURE THYLAKOID 1A, chloroplastic-like [Solanum lycopersicum]
Solyc06g048740.2.1	3243	40.9698674645927	774.661476559995	4.24093086622308	1.86094696587037e-08	Up	1.59194620794412e-09	NA	NA	NA	K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|723705753|ref|XP_010322115.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Solanum lycopersicum]
Solyc04g005790.3.1	2215	47.9162081093431	223.708548480849	2.22303473771621	9.69250917476428e-05	Up	1.68755443399896e-05	NA	NA	NA	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460382486|ref|XP_004236970.1|//PREDICTED: protein NRT1/ PTR FAMILY 4.6-like [Solanum lycopersicum]
Solyc04g011690.3.1	2089	871.38833807494	184.421583932336	-2.24030829291734	0.000130962775642191	Down	2.35340517880946e-05	NA	NA	NA	K20562	gi|460382002|ref|XP_004236729.1|//PREDICTED: cytochrome P450 CYP736A12-like [Solanum lycopersicum]
Solyc06g064500.2.1	1485	129.213364516919	311.925278017955	1.27144517611666	0.0204528568231721	Up	0.00660593426169623	NA	NA	NA	K13262//isoflavone-7-O-methyltransferase [EC:2.1.1.150];K16040//trans-resveratrol di-O-methyltransferase [EC:2.1.1.240];K13259//2,7,4'-trihydroxyisoflavanone 4'-O-methyltransferase / isoflavone 4'-O-methyltransferase [EC:2.1.1.212 2.1.1.46]	gi|460392617|ref|XP_004241912.1|//PREDICTED: trans-resveratrol di-O-methyltransferase-like [Solanum lycopersicum]
Solyc09g005990.3.1	1446	36.2994006036806	85.8049720743841	1.24111552306347	0.0209245786528275	Up	0.00678800441051461	NA	NA	NA	K03798//cell division protease FtsH [EC:3.4.24.-]	gi|723728592|ref|XP_010326035.1|//PREDICTED: pentatricopeptide repeat-containing protein At2g37320 [Solanum lycopersicum]
Solyc06g062290.1.1	1404	28.0781040870729	88.3065402642615	1.65307476834538	0.00016887358205871	Up	3.12908370513585e-05	NA	NA	NA	K13495//cis-zeatin O-glucosyltransferase [EC:2.4.1.215]	gi|460392708|ref|XP_004241956.1|//PREDICTED: zeatin O-glucosyltransferase-like [Solanum lycopersicum]
Solyc04g008060.3.1	946	452.261026886771	45.7418417101125	-3.30556931915214	3.54738799481837e-11	Down	1.99795111829826e-12	GO:0031090//organelle membrane	NA	GO:0006879//cellular iron ion homeostasis;GO:0006826//iron ion transport	NA	gi|460382400|ref|XP_004236927.1|//PREDICTED: vacuolar iron transporter 1 [Solanum lycopersicum]
Solyc03g121830.1.1	1816	852.604593540678	1853.51440978304	1.12031459796863	0.000287756401486851	Up	5.59788526673577e-05	NA	NA	NA	K00671//glycylpeptide N-tetradecanoyltransferase [EC:2.3.1.97]	gi|460379666|ref|XP_004235582.1|//PREDICTED: glycylpeptide N-tetradecanoyltransferase 1-like [Solanum lycopersicum];gi|970018621|ref|XP_015070483.1|//PREDICTED: glycylpeptide N-tetradecanoyltransferase 1-like [Solanum pennellii]
Solyc02g071875.1.1	3824	96.9108245991185	893.166513494834	3.20419943907531	0.000151776133771076	Up	2.77664106362174e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|723675360|ref|XP_010316865.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase RFK1 [Solanum lycopersicum]
Solyc03g095770.3.1	1416	502.733478034145	1899.81074532898	1.91799003852145	0.0238755147111036	Up	0.00790896448626725	NA	NA	NA	K18835//WRKY transcription factor 2;K13459//disease resistance protein RPS2;K16225//probable WRKY transcription factor 52	gi|460378953|ref|XP_004235231.1|//PREDICTED: probable WRKY transcription factor 70 [Solanum lycopersicum]
Solyc03g098730.1.1	741	423.662543498825	13077.7583900309	4.9480558808223	1.09313332143168e-34	Up	5.3784701963986e-37	NA	NA	NA	NA	gi|460379321|ref|XP_004235412.1|//PREDICTED: miraculin-like [Solanum lycopersicum]
Solyc05g053300.3.1	1827	12425.6989156396	2442.56329681576	-2.34685914826535	5.20110361760028e-16	Down	1.48890993675153e-17	GO:0044424//intracellular part	GO:0016668//oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor;GO:0050662//coenzyme binding	GO:0019725//cellular homeostasis;GO:0008152//metabolic process	K00382//dihydrolipoamide dehydrogenase [EC:1.8.1.4]	gi|350536667|ref|NP_001234770.1|//dihydrolipoamide dehydrogenase precursor [Solanum lycopersicum]
Solyc10g005640.3.1	1939	680.162281140879	3424.71135627184	2.33203149129656	4.03127085552538e-12	Up	1.95943685537688e-13	GO:0005886//plasma membrane	GO:0004674//protein serine/threonine kinase activity;GO:0005524//ATP binding	GO:0046777//protein autophosphorylation	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K19704//protein phosphatase PTC1 [EC:3.1.3.16];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1];K17506//protein phosphatase 1L [EC:3.1.3.16]	gi|460405769|ref|XP_004248347.1|//PREDICTED: putative serine/threonine-protein kinase [Solanum lycopersicum];gi|460405724|ref|XP_004248325.1|//PREDICTED: probable protein phosphatase 2C 6 [Solanum lycopersicum]
Solyc09g065870.3.1	2734	445.294368482836	1485.20999855699	1.73783566104501	1.88947107926931e-15	Up	5.75405498644337e-17	NA	GO:0008270//zinc ion binding	NA	K16280//E3 ubiquitin-protein ligase RGLG [EC:2.3.2.27]	gi|970049476|ref|XP_015086251.1|//PREDICTED: E3 ubiquitin-protein ligase RGLG1-like [Solanum pennellii];gi|460403471|ref|XP_004247214.1|//PREDICTED: E3 ubiquitin-protein ligase RGLG1 [Solanum lycopersicum]
Solyc03g097580.3.1	1216	900.496998088594	84.523667454458	-3.41329419493548	1.28341311860549e-05	Down	1.86092031883679e-06	NA	NA	NA	K15382//solute carrier family 50 (sugar transporter)	gi|723684251|ref|XP_004235342.2|//PREDICTED: uncharacterized protein LOC101265905 [Solanum lycopersicum]
Solyc02g080450.1.1	348	15.325094318171	74.9382642826744	2.28980660940592	5.3091236920043e-06	Up	7.14598391673905e-07	NA	NA	NA	NA	gi|698527540|ref|XP_009760613.1|//PREDICTED: uncharacterized protein LOC104212937 isoform X1 [Nicotiana sylvestris]
Solyc05g024190.3.1	666	20.2811447124557	0.595217248244092	-5.0905789397359	0.000768150684552223	Down	0.00016598216484081	NA	NA	NA	NA	NA
Solyc01g009565.1.1	1373	581.737572241166	171.508642454156	-1.76208720866269	0.00139365038139553	Down	0.000319581673861088	NA	NA	NA	K00924;K19613//leucine-rich repeat protein SHOC2;K13428//LRR receptor-like serine/threonine-protein kinase EFR [EC:2.7.11.1];K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|970065564|ref|XP_015059741.1|//PREDICTED: receptor-like protein 12 [Solanum pennellii];gi|970064679|ref|XP_015059311.1|//PREDICTED: receptor-like protein 12 [Solanum pennellii]
Solyc11g073255.1.1	4600	264.668381407087	97.0069579951674	-1.44802571767744	3.23787928536919e-05	Down	5.12088929768208e-06	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial	gi|460412135|ref|XP_004251458.1|//PREDICTED: putative pentatricopeptide repeat-containing protein At5g59900 isoform X1 [Solanum lycopersicum]
Solyc04g082050.3.1	1225	205.753368983756	34.2283268417417	-2.58765337639747	0.00539977231849739	Down	0.00145722199142393	NA	NA	NA	K18470//Rho GTPase-activating protein 1	gi|460385415|ref|XP_004238399.1|//PREDICTED: ganglioside-induced differentiation-associated protein 2-like [Solanum lycopersicum]
Solyc01g009020.3.1	556	1125.19514619496	2560.78787471146	1.18641251651496	0.0107766281591846	Up	0.00317900086669849	NA	GO:0008233//peptidase activity;GO:0004866//endopeptidase inhibitor activity;GO:0004869//cysteine-type endopeptidase inhibitor activity	GO:0010951//negative regulation of endopeptidase activity;GO:0051346//negative regulation of hydrolase activity	K13899//cystatin-C;K13902//cystatin-M	gi|460365176|ref|XP_004228480.1|//PREDICTED: cysteine proteinase inhibitor A [Solanum lycopersicum]
Solyc01g086950.3.1	2666	433.80100687947	93.9435333633261	-2.20716763985283	0.000285124631421489	Down	5.54243683041251e-05	NA	NA	NA	K10398//kinesin family member 11;K01062//platelet-activating factor acetylhydrolase [EC:3.1.1.47]	gi|460367499|ref|XP_004229611.1|//PREDICTED: uncharacterized protein At5g08430 [Solanum lycopersicum]
Solyc11g069680.1.1	1425	0.746187567978392	20.0677507871876	4.74919679287044	0.000114536769997729	Up	2.03171165531433e-05	NA	NA	NA	K13065//shikimate O-hydroxycinnamoyltransferase [EC:2.3.1.133]	gi|460412025|ref|XP_004251404.1|//PREDICTED: deacetylvindoline O-acetyltransferase-like [Solanum lycopersicum]
Solyc07g065970.1.1	495	59.9622395069898	177.325978532154	1.56427773671587	0.00425343530992885	Up	0.00111647127823613	NA	NA	NA	K03686//molecular chaperone DnaJ;K01956//carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]	gi|723717898|ref|XP_010324234.1|//PREDICTED: chaperone protein dnaJ 11, chloroplastic-like [Solanum lycopersicum]
Solyc06g076830.2.1	1815	21.6415712548673	6.47629146978031	-1.74056542608803	0.02615880399579	Down	0.00879890589153158	NA	NA	NA	K15356//GDP-mannose transporter	gi|460392931|ref|XP_004242065.1|//PREDICTED: GDP-mannose transporter GONST2 [Solanum lycopersicum]
Solyc06g048480.3.1	2401	777.98834094783	374.3396587462	-1.05540063484228	1.52228809238088e-05	Down	2.24700344633528e-06	NA	NA	NA	NA	gi|460390433|ref|XP_004240838.1|//PREDICTED: uncharacterized protein LOC101246351 isoform X1 [Solanum lycopersicum]
Solyc10g018590.2.1	3745	1745.91448465377	498.922663511789	-1.80709478689443	1.85332539319169e-05	Down	2.78468564930509e-06	NA	NA	NA	K11292//transcription elongation factor SPT6;K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1];K18577//mannosylglycoprotein endo-beta-mannosidase [EC:3.2.1.152]	gi|460406193|ref|XP_004248552.1|//PREDICTED: probable plastid-lipid-associated protein 11 [Solanum lycopersicum]
Solyc03g121090.3.1	2067	710.129813231632	2901.65283012323	2.03072023613204	0.0170088128806699	Up	0.00532999440464411	NA	NA	NA	NA	gi|460379781|ref|XP_004235639.1|//PREDICTED: uncharacterized protein LOC101254072 [Solanum lycopersicum]
Solyc01g097250.3.1	2062	271.364561048537	591.922317907023	1.12517552956167	0.000187140325879331	Up	3.49532588031131e-05	NA	NA	NA	K14569//ribosome biogenesis protein BMS1;K06662//cell cycle checkpoint protein	gi|460368470|ref|XP_004230089.1|//PREDICTED: uncharacterized protein LOC101259373 [Solanum lycopersicum]
Solyc01g044350.3.1	3181	153.526016037307	457.076273932301	1.5739517821002	1.35604704032622e-06	Up	1.63263453863639e-07	NA	NA	NA	K11968//ariadne-1 [EC:2.3.2.27]	gi|460366165|ref|XP_004228962.1|//PREDICTED: probable E3 ubiquitin-protein ligase ARI7 [Solanum lycopersicum]
Solyc11g018750.2.1	3886	45.9587514353681	165.506491142926	1.8484762906214	0.000135068625018313	Up	2.44022654186427e-05	NA	NA	NA	K03217//YidC/Oxa1 family membrane protein insertase	gi|723742772|ref|XP_010312846.1|//PREDICTED: ALBINO3-like protein 2, chloroplastic [Solanum lycopersicum];gi|971585913|ref|XP_015160649.1|//PREDICTED: ALBINO3-like protein 3, mitochondrial [Solanum tuberosum]
Solyc12g099780.2.1	1390	294.408520619883	10.2893948768032	-4.83858938133715	2.17203735974015e-12	Down	1.01768710347151e-13	NA	NA	NA	K14692//solute carrier family 30 (zinc transporter), member 5/7;K01534//Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5]	gi|460415077|ref|XP_004252887.1|//PREDICTED: histidine-rich glycoprotein-like [Solanum lycopersicum]
Solyc01g108630.3.1	2853	4000.03179458427	111.504808482594	-5.16483363670289	6.11309156781965e-38	Down	2.25583742811296e-40	NA	GO:0005506//iron ion binding;GO:0016664//oxidoreductase activity, acting on other nitrogenous compounds as donors, iron-sulfur protein as acceptor;GO:0051540//metal cluster binding	GO:0008152//metabolic process	K00366//ferredoxin-nitrite reductase [EC:1.7.7.1]	gi|460369951|ref|XP_004230820.1|//PREDICTED: ferredoxin--nitrite reductase, chloroplastic [Solanum lycopersicum]
Solyc11g013190.2.1	2862	1186.19646257329	5926.40897178705	2.3208152131979	4.15439464364237e-11	Up	2.36924996450456e-12	NA	NA	NA	K20456//oxysterol-binding protein 1	gi|723742436|ref|XP_010312786.1|//PREDICTED: oxysterol-binding protein-related protein 1C-like isoform X2 [Solanum lycopersicum];gi|460409824|ref|XP_004250338.1|//PREDICTED: oxysterol-binding protein-related protein 1C-like isoform X1 [Solanum lycopersicum];gi|723742439|ref|XP_010312787.1|//PREDICTED: oxysterol-binding protein-related protein 1C-like isoform X3 [Solanum lycopersicum]
Solyc07g056490.4.1	1054	1982.19649227017	936.733608926467	-1.08138924844266	0.00469246626607777	Down	0.00124395482646284	NA	GO:0003824//catalytic activity	NA	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|460395239|ref|XP_004243192.1|//PREDICTED: probable glutathione S-transferase [Solanum lycopersicum]
Solyc02g071440.3.1	2011	2.12842492584117	12.9046085099189	2.60002826557428	0.025340137336251	Up	0.00848669800082807	NA	NA	NA	K05278//flavonol synthase [EC:1.14.11.23];K06892//feruloyl-CoA ortho-hydroxylase [EC:1.14.11.-]	gi|460374411|ref|XP_004233004.1|//PREDICTED: protein SRG1-like [Solanum lycopersicum]
Solyc02g070040.1.1	1026	169.799541284349	619.164910351225	1.86649115116822	0.000131305712428738	Up	2.36103606961471e-05	NA	NA	NA	NA	gi|460374712|ref|XP_004233154.1|//PREDICTED: uncharacterized protein LOC101257038 [Solanum lycopersicum]
Solyc03g123380.1.1	928	16.4024596410602	711.800871620842	5.43948962305824	1.48690450264173e-12	Up	6.80047646019609e-14	GO:0016020//membrane	NA	NA	NA	gi|645244285|ref|XP_008228360.1|//PREDICTED: uncharacterized protein LOC103327771 [Prunus mume]
Solyc08g068450.1.1	372	0.401370186441356	11.3117218898038	4.81674128726553	0.00134341815852144	Up	0.000307361736134062	NA	NA	NA	NA	NA
Solyc05g053070.3.1	357	8673.67448249416	35828.3571212452	2.04638668561568	0.0139187212377999	Up	0.0042459674448395	NA	NA	NA	NA	NA
Solyc06g060690.2.1	1569	594.913392429239	4636.24064706176	2.96220389122091	4.95288020185441e-06	Up	6.62402496058357e-07	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460392802|ref|XP_004242002.1|//PREDICTED: inactive serine/threonine-protein kinase At1g67470-like [Solanum lycopersicum]
Solyc10g054100.2.1	2143	1180.60458476104	330.049719442739	-1.83877057264495	2.53069452245433e-05	Down	3.91282275202794e-06	NA	GO:0022857//transmembrane transporter activity	GO:0006810//transport	NA	gi|460406480|ref|XP_004248692.1|//PREDICTED: MATE efflux family protein 4, chloroplastic-like [Solanum lycopersicum]
Solyc08g007510.3.1	3999	116.227149960389	252.953775455139	1.12192665925449	0.00100189800380637	Up	0.000222652299787296	GO:0044464//cell part	NA	GO:0007165//signal transduction	K20368//protein cornichon	gi|460398055|ref|XP_004244580.1|//PREDICTED: protein cornichon homolog 4-like [Solanum lycopersicum]
Solyc07g053480.3.1	1261	295.978459442681	968.843855422968	1.71077198714288	9.54607841311211e-05	Up	1.65992454887312e-05	NA	GO:0032561//guanyl ribonucleotide binding;GO:0003824//catalytic activity	GO:0006810//transport;GO:0035556//intracellular signal transduction	K07904//Ras-related protein Rab-11A	gi|460395655|ref|XP_004243397.1|//PREDICTED: ras-related protein RABA1f [Solanum lycopersicum]
Solyc02g062930.3.1	996	204.376333711131	982.591838380079	2.26536411047762	1.42543996378571e-14	Up	4.89882080889528e-16	GO:0043231//intracellular membrane-bounded organelle	NA	NA	NA	gi|565360359|ref|XP_006346937.1|//PREDICTED: uncharacterized protein LOC102584267 [Solanum tuberosum];gi|723677632|ref|XP_010317203.1|//PREDICTED: uncharacterized protein LOC104645968 isoform X2 [Solanum lycopersicum]
Solyc09g091560.3.1	9830	1069.10841753347	3047.31754247515	1.51113167918846	2.77826431171399e-06	Up	3.55412372066588e-07	NA	NA	NA	K06126//ubiquinone biosynthesis monooxygenase Coq6 [EC:1.14.13.-]	gi|460404732|ref|XP_004247835.1|//PREDICTED: ankyrin repeat domain-containing protein 13C-A-like [Solanum lycopersicum]
Solyc00g095860.1.1	672	108.125924784686	1071.00783989517	3.30818466374586	2.70620851235897e-09	Up	2.0507387452012e-10	NA	GO:0016846//carbon-sulfur lyase activity;GO:0048037//cofactor binding;GO:0016740//transferase activity	GO:0008652//cellular amino acid biosynthetic process	K20772	gi|806638517|ref|NP_001233922.2|//1-aminocyclopropane-1-carboxylate synthase [Solanum lycopersicum]
Solyc05g008830.3.1	2299	1393.59506015405	3306.13041429049	1.2463322194248	0.00587920635152127	Up	0.00160742428017029	NA	NA	NA	NA	gi|460386410|ref|XP_004238891.1|//PREDICTED: uncharacterized protein LOC101268863 [Solanum lycopersicum]
Solyc11g021310.1.1	1182	1528.92855880604	624.678334797781	-1.29133559636959	5.3260824556787e-06	Down	7.17278064424002e-07	GO:0031224//intrinsic component of membrane;GO:0009941//chloroplast envelope	NA	NA	NA	gi|544163672|ref|YP_008563147.1|//hypothetical chloroplast RF1 (chloroplast) [Solanum lycopersicum]
Solyc12g032955.1.1	1905	2038.81281453522	857.404847205085	-1.24968084780214	8.28207987473516e-05	Down	1.419097138492e-05	NA	NA	NA	K13436//pto-interacting protein 1 [EC:2.7.11.1]	gi|460413674|ref|XP_004252207.1|//PREDICTED: CBS domain-containing protein CBSCBSPB3 [Solanum lycopersicum]
Solyc03g122100.2.1	1826	29.673347455022	6.27905537597315	-2.24054824581757	0.00414750463998496	Down	0.00108404973688287	NA	NA	NA	K10268//F-box and leucine-rich repeat protein 2/20;K09458//3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179];K10273//F-box and leucine-rich repeat protein 7	gi|723684814|ref|XP_010318482.1|//PREDICTED: putative F-box/LRR-repeat protein 22 [Solanum lycopersicum]
Solyc03g119420.3.1	3936	527.483040585104	1494.31570248376	1.50228836222199	7.79177736841266e-07	Up	8.89020073233605e-08	NA	NA	NA	K13107//RNA-binding motif protein, X-linked 2	gi|460380112|ref|XP_004235802.1|//PREDICTED: anamorsin homolog isoform X2 [Solanum lycopersicum];gi|723685661|ref|XP_010318616.1|//PREDICTED: anamorsin homolog isoform X1 [Solanum lycopersicum]
Solyc05g012900.3.1	4864	321.27988783514	1257.34370099101	1.96847649550495	0.000360128537328916	Up	7.16403959425883e-05	NA	NA	NA	K13453;K13457//disease resistance protein RPM1	gi|565364202|ref|XP_006348816.1|//PREDICTED: putative late blight resistance protein homolog R1B-23 [Solanum tuberosum]
Solyc01g080220.3.1	1383	993.483858242714	3491.47272111397	1.81326726858182	0.00192613908718861	Up	0.000458416507816433	NA	GO:0016787//hydrolase activity	NA	K01061//carboxymethylenebutenolidase [EC:3.1.1.45]	gi|723658857|ref|XP_010322752.1|//PREDICTED: endo-1,3;1,4-beta-D-glucanase-like [Solanum lycopersicum]
Solyc01g057270.3.1	581	40.4708656351133	3.37523648568332	-3.58382321414202	0.00014552456162255	Down	2.64654218039519e-05	GO:0005634//nucleus	GO:0003677//DNA binding	NA	K14674//TAG lipase / steryl ester hydrolase / phospholipase A2 / LPA acyltransferase [EC:3.1.1.3 3.1.1.13 3.1.1.4 2.3.1.51]	gi|723656833|ref|XP_010318684.1|//PREDICTED: calmodulin-binding transcription factor SR4 isoform X1 [Solanum lycopersicum];gi|723656836|ref|XP_010318686.1|//PREDICTED: calmodulin-binding transcription factor SR4 isoform X2 [Solanum lycopersicum]
Solyc12g042060.2.1	4159	17166.4744041532	5330.12344849964	-1.68735292157876	0.0120263474952099	Down	0.00359427665933327	GO:0009536//plastid;GO:0009507//chloroplast	GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0016462//pyrophosphatase activity;GO:0003676//nucleic acid binding;GO:0016788//hydrolase activity, acting on ester bonds	GO:0006281//DNA repair;GO:0019538//protein metabolic process	K03696//ATP-dependent Clp protease ATP-binding subunit ClpC	gi|970067057|ref|XP_015060603.1|//PREDICTED: ATP-dependent Clp protease ATP-binding subunit ClpA homolog CD4B, chloroplastic [Solanum pennellii];gi|460413829|ref|XP_004252280.1|//PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpA homolog CD4B, chloroplastic [Solanum lycopersicum]
Solyc06g009190.3.1	2132	1047.988040855	299.639716458157	-1.80632148658862	0.000144070443243177	Down	2.6173210037607e-05	NA	NA	NA	K01051//pectinesterase [EC:3.1.1.11]	gi|723704409|ref|XP_010321856.1|//PREDICTED: pectinesterase [Solanum lycopersicum]
Solyc05g007120.3.1	2891	1009.75203302467	302.508558183165	-1.73895318780142	1.52541717003259e-05	Down	2.25219077474992e-06	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13415//protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1]	gi|970030566|ref|XP_015076566.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g14390 [Solanum pennellii]
Solyc01g058030.2.1	1337	26.7247857380739	6.45351812448609	-2.05002061854111	0.0448016879972398	Down	0.0164474364501571	NA	GO:0046872//metal ion binding;GO:0052634//C-19 gibberellin 2-beta-dioxygenase activity;GO:0003824//catalytic activity	GO:0008152//metabolic process;GO:0009416//response to light stimulus;GO:0045487//gibberellin catabolic process	K04125//gibberellin 2-oxidase [EC:1.14.11.13]	gi|460366463|ref|XP_004229101.1|//PREDICTED: gibberellin 2-beta-dioxygenase 2-like [Solanum lycopersicum];gi|970000155|ref|XP_015086748.1|//PREDICTED: gibberellin 2-beta-dioxygenase 2-like [Solanum pennellii]
Solyc10g084000.2.1	1426	132.810392731623	590.970411673805	2.15371785483648	0.00296810852297642	Up	0.000743133478039086	NA	NA	NA	K10752//histone-binding protein RBBP4;K07213//copper chaperone	gi|460408094|ref|XP_004249483.1|//PREDICTED: uncharacterized protein LOC101245601 [Solanum lycopersicum]
Solyc02g086180.3.1	1347	13317.1129329238	1184.91087046442	-3.49043090087586	4.32315719803914e-05	Down	6.97912398416115e-06	GO:0031224//intrinsic component of membrane;GO:0043231//intracellular membrane-bounded organelle;GO:0031090//organelle membrane	GO:0046914//transition metal ion binding;GO:0046996//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, with NAD(P)H as one donor, and the other dehydrogenated	GO:0006694//steroid biosynthetic process;GO:0006631//fatty acid metabolic process	K00227//Delta7-sterol 5-desaturase [EC:1.14.19.20]	gi|460373067|ref|XP_004232344.1|//PREDICTED: delta(7)-sterol-C5(6)-desaturase [Solanum lycopersicum]
Solyc07g055880.1.1	216	1.62079826017008	14.8623926298811	3.19688995185405	0.0202617450094249	Up	0.00653514535435194	NA	NA	NA	NA	gi|970043360|ref|XP_015083082.1|//PREDICTED: uncharacterized protein LOC107026578 [Solanum pennellii]
Solyc11g005060.2.1	1561	246.903080423648	520.309097192894	1.07542409590478	0.00712803473432546	Up	0.00199987764444863	NA	NA	NA	K18159//NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 1	gi|460408834|ref|XP_004249846.1|//PREDICTED: probable complex I intermediate-associated protein 30 [Solanum lycopersicum];gi|565368994|ref|XP_006351123.1|//PREDICTED: probable complex I intermediate-associated protein 30 [Solanum tuberosum]
Solyc03g082520.1.1	513	114.638983694781	590.404971094911	2.36460714376842	6.0288970422654e-05	Up	1.00663391916779e-05	NA	NA	NA	K14488//SAUR family protein	gi|698529565|ref|XP_009761598.1|//PREDICTED: auxin-induced protein 6B-like [Nicotiana sylvestris]
Solyc12g056420.2.1	1650	6.93918448909629	35.9493069600939	2.37312592966303	0.00774653418409605	Up	0.0021936193602422	NA	NA	NA	K13519//lysophospholipid acyltransferase [EC:2.3.1.51 2.3.1.23 2.3.1.-]	gi|460414439|ref|XP_004252578.1|//PREDICTED: lysophospholipid acyltransferase 1-like [Solanum lycopersicum]
Solyc03g006010.3.1	1913	24.6414538549458	6.90919049153818	-1.8344987843963	0.0155567229230196	Down	0.00482103005747669	NA	NA	NA	NA	gi|460376583|ref|XP_004234077.1|//PREDICTED: uncharacterized protein LOC101247696 [Solanum lycopersicum]
Solyc02g090730.3.1	2358	166.255364564054	732.41144696723	2.13925344658151	0.0021248825063168	Up	0.000510865221624546	GO:0044464//cell part	GO:0015291//secondary active transmembrane transporter activity	GO:0015893//drug transport	K03327//multidrug resistance protein, MATE family	gi|723670299|ref|XP_010316145.1|//PREDICTED: multidrug and toxin extrusion protein 2-like isoform X2 [Solanum lycopersicum]
Solyc02g070110.1.1	1593	5.68933696902777	344.080153929158	5.91834033982718	3.19319440014765e-15	Up	1.00099764817511e-16	NA	NA	NA	NA	gi|723675916|ref|XP_004233882.2|//PREDICTED: cannabidiolic acid synthase-like [Solanum lycopersicum]
Solyc01g088590.4.1	739	19.9309016282544	3.67482802182499	-2.43925833587022	0.0157255005528866	Down	0.00488212666262831	NA	NA	NA	K07575//PUA domain protein;K01051//pectinesterase [EC:3.1.1.11]	gi|460367699|ref|XP_004229708.1|//PREDICTED: putative invertase inhibitor [Solanum lycopersicum]
Solyc07g054090.3.1	2248	209.473826120263	43.4361065701213	-2.26980329264292	8.28312482257619e-07	Down	9.52491429761724e-08	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial	gi|970040327|ref|XP_015081543.1|//PREDICTED: uncharacterized protein LOC107025263 [Solanum pennellii]
Solyc06g007510.3.1	1070	10404.6723415822	25579.221825626	1.29774084183092	0.000107762986163665	Up	1.8963361326922e-05	NA	GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0019787//ubiquitin-like protein transferase activity;GO:0016740//transferase activity	GO:0032446//protein modification by small protein conjugation;GO:0016567//protein ubiquitination	K06689//ubiquitin-conjugating enzyme E2 D [EC:2.3.2.23]	gi|350536447|ref|NP_001234247.1|//ubiquitin conjugating enzyme [Solanum lycopersicum]
Solyc12g011010.2.1	1673	5584.62386589234	958.782318378859	-2.54218490743856	0.0339471800271648	Down	0.0118792353546676	NA	NA	NA	K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]	gi|460412857|ref|XP_004251814.1|//PREDICTED: protodermal factor 1-like [Solanum lycopersicum]
Solyc05g005950.3.1	2170	5235.31899895703	909.299674200307	-2.52544970522404	0.000322948114126175	Down	6.36073443805989e-05	NA	NA	NA	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|992319548|ref|NP_001307053.1|//protein NRT1/ PTR FAMILY 1.2 [Solanum lycopersicum]
Solyc01g104060.3.1	2018	1123.6718858691	324.700601499659	-1.79103886531433	8.99208113005451e-11	Down	5.38961773413137e-12	GO:0044424//intracellular part	GO:0008168//methyltransferase activity	GO:0006544//glycine metabolic process	K00605//aminomethyltransferase [EC:2.1.2.10]	gi|723663982|ref|XP_004230488.2|//PREDICTED: aminomethyltransferase, mitochondrial isoform X1 [Solanum lycopersicum];gi|723663986|ref|XP_010314734.1|//PREDICTED: aminomethyltransferase, mitochondrial isoform X2 [Solanum lycopersicum];gi|971553862|ref|XP_015165039.1|//PREDICTED: putative transferase At1g60990, chloroplastic isoform X2 [Solanum tuberosum]
Solyc07g007600.3.1	2777	18838.5195321862	7450.14891588264	-1.33834442393062	0.000883495271608084	Down	0.000194001440474252	GO:0016021//integral component of membrane	GO:0046872//metal ion binding;GO:0015405//P-P-bond-hydrolysis-driven transmembrane transporter activity;GO:0016462//pyrophosphatase activity	GO:0006818//hydrogen transport	K01507//inorganic pyrophosphatase [EC:3.6.1.1]	gi|807066294|ref|NP_001265905.2|//vacuolar-type H+-pyrophosphatase [Solanum lycopersicum]
Solyc12g011090.2.1	807	8.49393509915753	522.940516461776	5.94406995630904	9.16918440757638e-32	Up	5.87855866297576e-34	NA	NA	NA	NA	NA
Solyc12g007100.2.1	2175	763.319161921603	338.533509214255	-1.17298776456477	0.00471807378450211	Down	0.00125208698392895	NA	GO:0016462//pyrophosphatase activity;GO:0032559//adenyl ribonucleotide binding	NA	K20032//palmitoyltransferase ZDHHC13/17 [EC:2.3.1.225];K06694//26S proteasome non-ATPase regulatory subunit 10	gi|460412435|ref|XP_004251606.1|//PREDICTED: protein cfxQ homolog [Solanum lycopersicum]
Solyc07g018390.2.1	4236	82.9292109893242	32.326282498033	-1.35917275822433	0.00574955374827442	Down	0.00156717887008599	NA	NA	NA	NA	NA
BGI_novel_G000428	777	21.499767162627	0.426634875476572	-5.65517532131856	5.03327871355427e-05	Down	8.2380821646104e-06	NA	NA	NA	NA	gi|970017172|ref|XP_015069712.1|//PREDICTED: DNA-binding protein SMUBP-2 [Solanum pennellii]
Solyc06g082760.3.1	501	1238.80298699296	109.088522132618	-3.50537554671245	6.36157447877433e-06	Down	8.69772446255563e-07	GO:0030529//intracellular ribonucleoprotein complex;GO:0009536//plastid	GO:0003723//RNA binding;GO:0005198//structural molecule activity	GO:0010467//gene expression	K02879//large subunit ribosomal protein L17	gi|460393748|ref|XP_004242471.1|//PREDICTED: 50S ribosomal protein L17, chloroplastic [Solanum lycopersicum]
Solyc06g074620.3.1	972	70.4587941490898	1650.35428881238	4.54985217281243	6.70430361963252e-11	Up	3.95091099695803e-12	NA	NA	NA	NA	gi|460391387|ref|XP_004241302.1|//PREDICTED: uncharacterized protein At4g22758-like [Solanum lycopersicum]
Solyc02g071640.2.1	2523	128.512613165686	482.598793655642	1.90891434628908	7.50328786310836e-06	Up	1.04349064474643e-06	NA	NA	NA	K17604//zinc finger SWIM domain-containing protein 3;K00679//phospholipid:diacylglycerol acyltransferase [EC:2.3.1.158];K10960//geranylgeranyl reductase [EC:1.3.1.83]	gi|723675443|ref|XP_010316879.1|//PREDICTED: GDSL esterase/lipase At4g18970-like isoform X3 [Solanum lycopersicum];gi|723675440|ref|XP_010316877.1|//PREDICTED: GDSL esterase/lipase At1g29670-like isoform X2 [Solanum lycopersicum]
Solyc04g007350.3.1	2214	42.5676354520765	403.357481736525	3.24423015762168	2.51519659310111e-13	Up	1.02565419444335e-14	NA	NA	NA	NA	gi|460382552|ref|XP_004237003.1|//PREDICTED: uncharacterized protein LOC101260633 [Solanum lycopersicum]
Solyc02g068280.3.1	5315	498.712462558257	230.562997727915	-1.1130472572909	0.00378711847807419	Down	0.000980235228557744	NA	GO:0004175//endopeptidase activity;GO:0004252//serine-type endopeptidase activity;GO:0005515//protein binding	GO:0044092//negative regulation of molecular function;GO:0006508//proteolysis;GO:0019538//protein metabolic process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13199//plasminogen activator inhibitor 1 RNA-binding protein;K12663//Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase [EC:5.3.3.-];K01183//chitinase [EC:3.2.1.14]	gi|964749884|ref|NP_001304905.1|//subtilisin-like protease SBT3.5 precursor [Solanum lycopersicum];gi|460374972|ref|XP_004233282.1|//PREDICTED: subtilisin-like protease SBT3.5 isoform X2 [Solanum lycopersicum];gi|697104700|ref|XP_009606152.1|//PREDICTED: subtilisin-like protease SBT5.4 [Nicotiana tomentosiformis]
Solyc03g122340.3.1	4448	4807.44636283804	28587.8431394112	2.57205911091161	2.30380460869658e-09	Up	1.72690885197884e-10	NA	GO:0016702//oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen;GO:0046914//transition metal ion binding	GO:0006633//fatty acid biosynthetic process	K00454//lipoxygenase [EC:1.13.11.12]	gi|1654140|gb|AAB65767.1|//lipoxygenase [Solanum lycopersicum]
Solyc07g053020.2.1	3138	845.148332219883	349.472666222676	-1.27402495086847	0.0455519096148166	Down	0.0167585115512986	NA	NA	NA	K13457//disease resistance protein RPM1;K15078//structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]	gi|460395720|ref|XP_004243429.1|//PREDICTED: disease resistance RPP13-like protein 4 [Solanum lycopersicum]
Solyc09g083260.3.1	3454	374.489540438122	138.358237834532	-1.43651688009637	3.25833658451555e-06	Down	4.21927139354668e-07	NA	NA	NA	NA	gi|460404435|ref|XP_004247688.1|//PREDICTED: putative ion channel POLLUX-like 2 [Solanum lycopersicum]
Solyc01g097220.2.1	5478	89.0099010255566	430.498700812279	2.27397115531728	3.85205921952318e-09	Up	2.99211148568251e-10	NA	NA	NA	K07151//dolichyl-diphosphooligosaccharide--protein glycosyltransferase [EC:2.4.99.18];K13118//protein DGCR14;K06694//26S proteasome non-ATPase regulatory subunit 10	gi|723661983|ref|XP_010327643.1|//PREDICTED: ankyrin repeat domain-containing protein 50-like [Solanum lycopersicum]
Solyc05g009570.3.1	592	1483.8641950109	278.72202625077	-2.41246013856951	1.65598320313626e-06	Down	2.02954852091547e-07	NA	NA	NA	K19032//30S ribosomal protein 3	gi|460386514|ref|XP_004238943.1|//PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Solanum lycopersicum]
Solyc02g062610.3.1	1589	5989.60969070386	153.91728048548	-5.28223487467895	3.22350551739565e-44	Down	7.08911680059428e-47	NA	NA	NA	NA	gi|460375469|ref|XP_004233528.1|//PREDICTED: pheophytinase, chloroplastic [Solanum lycopersicum]
Solyc03g121530.3.1	1368	1138.50248512657	313.996848812754	-1.85831545479106	7.47850594234717e-14	Down	2.84053882333822e-15	NA	NA	NA	K11145//ribonuclease III family protein [EC:3.1.26.-]	gi|460379708|ref|XP_004235603.1|//PREDICTED: uncharacterized protein LOC101268172 [Solanum lycopersicum]
Solyc01g057600.3.1	1056	13.2178012622715	34.8044041053643	1.3967876652016	0.025644187349084	Up	0.00860668938762309	NA	NA	NA	NA	gi|723657193|ref|XP_010319338.1|//PREDICTED: uncharacterized protein LOC104646718 [Solanum lycopersicum]
Solyc05g010720.3.1	1323	33.8531166698085	297.708654826085	3.13654059743513	1.9760286835368e-15	Up	6.05447882014034e-17	NA	NA	NA	K18880//very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase [EC:4.2.1.134]	gi|460386659|ref|XP_004239014.1|//PREDICTED: 3-hydroxybutyryl-CoA dehydratase-like protein, mitochondrial [Solanum lycopersicum]
Solyc04g015570.3.1	1312	168.607040418312	831.06798979571	2.30130172967075	7.32405653228682e-09	Up	5.92957014616333e-10	NA	GO:0046872//metal ion binding	NA	NA	gi|460381783|ref|XP_004236621.1|//PREDICTED: zinc finger AN1 and C2H2 domain-containing stress-associated protein 11 [Solanum lycopersicum]
Solyc02g070810.3.1	3504	819.7182257524	215.586034121542	-1.92686435348381	2.58516435003544e-07	Down	2.70388070903513e-08	NA	NA	NA	K14314//nuclear pore complex protein Nup210	gi|460374612|ref|XP_004233104.1|//PREDICTED: uncharacterized protein ycf23 [Solanum lycopersicum];gi|460376164|ref|XP_004233869.1|//PREDICTED: nuclear pore membrane glycoprotein 210 [Solanum lycopersicum]
Solyc01g095980.3.1	1788	1461.15278184731	65.4369047809948	-4.48085871842185	6.34179649515691e-18	Down	1.46087305576523e-19	NA	NA	NA	K09775//uncharacterized protein	gi|460368255|ref|XP_004229983.1|//PREDICTED: uncharacterized protein LOC101252225 isoform X1 [Solanum lycopersicum]
Solyc10g084950.2.1	1964	215.502836852598	53.4763622105243	-2.01073362796314	0.00389742230685181	Down	0.00101140055540116	NA	NA	NA	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|723739510|ref|XP_010312293.1|//PREDICTED: protein NRT1/ PTR FAMILY 5.6-like [Solanum lycopersicum]
Solyc02g084840.3.1	919	162.927767940486	1413.49499334112	3.11696236321882	5.78235586739292e-07	Up	6.4423220842543e-08	NA	NA	NA	NA	gi|970008589|ref|XP_015065160.1|//PREDICTED: late embryogenesis abundant protein-like [Solanum pennellii]
Solyc01g005230.3.1	1026	0.721556062785358	8.29044855341636	3.52226676327278	0.0144353531007868	Up	0.00442778144723328	NA	NA	NA	K12844//U4/U6 small nuclear ribonucleoprotein PRP31;K18848//indole-3-acetate O-methyltransferase [EC:2.1.1.278]	gi|460366115|ref|XP_004228938.1|//PREDICTED: probable S-adenosylmethionine-dependent methyltransferase At5g38780 [Solanum lycopersicum]
Solyc12g056600.3.1	1118	903.92083668353	5286.78250455281	2.54812164086751	2.68170495991995e-05	Up	4.16829792860674e-06	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K09841//xanthoxin dehydrogenase [EC:1.1.1.288]	gi|982742413|ref|NP_001238797.2|//short-chain dehydrogenase-reductase [Solanum lycopersicum]
Solyc06g069690.3.1	467	35.2081759886472	378.282247408375	3.4254806797278	9.81794974433976e-09	Up	8.08769529409232e-10	NA	NA	NA	K12127//pseudo-response regulator 1	gi|460393152|ref|XP_004242175.1|//PREDICTED: two-component response regulator-like APRR1 isoform X1 [Solanum lycopersicum]
Solyc04g064680.3.1	3049	706.412249322362	265.067686587698	-1.41414955245207	1.92948925780908e-06	Down	2.39136416513165e-07	GO:0044464//cell part	NA	NA	K01074//palmitoyl-protein thioesterase [EC:3.1.2.22];K02366//glucuronyl/N-acetylglucosaminyl transferase EXT1 [EC:2.4.1.224 2.4.1.225];K19589//release factor glutamine methyltransferase [EC:2.1.1.297];K18789//xylogalacturonan beta-1,3-xylosyltransferase [EC:2.4.2.41];K20870	gi|460384114|ref|XP_004237759.1|//PREDICTED: pentatricopeptide repeat-containing protein At3g21470 [Solanum lycopersicum];gi|460384048|ref|XP_004237727.1|//PREDICTED: probable glucuronosyltransferase GUT1 [Solanum lycopersicum]
Solyc12g062480.2.1	4572	278.830680085003	82.0658899062511	-1.76453470552376	0.00128523514404445	Down	0.000292325363387476	NA	NA	NA	NA	gi|723713633|ref|XP_010323424.1|//PREDICTED: CST complex subunit CTC1-like isoform X3 [Solanum lycopersicum];gi|723749941|ref|XP_010314530.1|//PREDICTED: CST complex subunit CTC1-like isoform X3 [Solanum lycopersicum];gi|723749935|ref|XP_004252675.2|//PREDICTED: CST complex subunit CTC1-like isoform X1 [Solanum lycopersicum];gi|723749938|ref|XP_010314529.1|//PREDICTED: CST complex subunit CTC1-like isoform X2 [Solanum lycopersicum]
Solyc02g083510.3.1	3800	81.469628058654	7.83479785062644	-3.37829436510266	0.00233722303517441	Down	0.00056784030651807	NA	NA	NA	K09872//aquaporin PIP	gi|723672820|ref|XP_010316437.1|//PREDICTED: probable aquaporin PIP2-8 isoform X1 [Solanum lycopersicum]
Solyc09g010285.1.1	2920	231.515838610782	96.7143545690936	-1.25930895658966	0.0220627125707239	Down	0.00721881955217738	NA	NA	NA	NA	gi|460401950|ref|XP_004246478.1|//PREDICTED: uncharacterized protein LOC101244110 [Solanum lycopersicum]
Solyc11g027986.1.1	890	205.258982139468	96.703015227316	-1.08581257660975	0.00318077146242198	Down	0.000803610741475182	NA	NA	NA	NA	gi|971585946|ref|XP_015160659.1|//PREDICTED: uncharacterized protein LOC102599371 [Solanum tuberosum]
Solyc04g005580.1.1	441	50.6068499625014	13.060030198228	-1.954174443407	0.0128236568137712	Down	0.0038665036516548	NA	NA	NA	K17782//mitochondrial intermembrane space import and assembly protein 40	gi|723690625|ref|XP_010319450.1|//PREDICTED: uncharacterized protein LOC104646747 [Solanum lycopersicum]
Solyc05g012370.3.1	2952	1854.99093044435	311.870417968707	-2.57239351363574	1.5422541967772e-19	Down	3.01805372486965e-21	NA	NA	NA	NA	gi|460386746|ref|XP_004239057.1|//PREDICTED: monoacylglycerol lipase ABHD6-like [Solanum lycopersicum]
Solyc06g051140.3.1	2519	4.10155185996471	450.528574634273	6.77930493120532	8.1639938600528e-27	Up	7.72859487991499e-29	NA	NA	NA	K00278//L-aspartate oxidase [EC:1.4.3.16];K10581//ubiquitin-conjugating enzyme E2 O [EC:2.3.2.24]	gi|698465802|ref|XP_009782760.1|//PREDICTED: probable ubiquitin-conjugating enzyme E2 23 [Nicotiana sylvestris];gi|460381606|ref|XP_004236539.1|//PREDICTED: putative pentatricopeptide repeat-containing protein At1g64310 [Solanum lycopersicum];gi|723666410|ref|XP_010315388.1|//PREDICTED: probable ubiquitin-conjugating enzyme E2 23 isoform X2 [Solanum lycopersicum];gi|723666392|ref|XP_010315382.1|//PREDICTED: probable ubiquitin-conjugating enzyme E2 23 isoform X1 [Solanum lycopersicum]
Solyc10g008150.1.1	330	5.93922135452255	138.524718099998	4.54372581810175	3.97167945652682e-10	Up	2.64107505234972e-11	NA	NA	NA	K03676//glutaredoxin 3	gi|723735210|ref|XP_004248179.2|//PREDICTED: glutaredoxin-C9-like [Solanum lycopersicum]
Solyc03g078800.2.1	1492	81.9906959154664	11.6262663220146	-2.81807234408184	0.000138088067699387	Down	2.49946196790005e-05	NA	NA	NA	K13493//cytokinin-N-glucosyltransferase [EC:2.4.1.-];K00699//glucuronosyltransferase [EC:2.4.1.17]	gi|970013184|ref|XP_015067551.1|//PREDICTED: 7-deoxyloganetic acid glucosyltransferase-like isoform X3 [Solanum pennellii]
Solyc06g069080.3.1	2830	77.2093868035125	195.223366329165	1.33827757946373	0.0118582090808778	Up	0.00353900165153438	NA	GO:0003824//catalytic activity	NA	K09667//protein O-GlcNAc transferase [EC:2.4.1.255];K12178//COP9 signalosome complex subunit 4	gi|460392055|ref|XP_004241633.1|//PREDICTED: tetratricopeptide repeat protein 7A [Solanum lycopersicum]
Solyc02g069830.3.1	3211	390.37490569389	184.062276300884	-1.0846663401497	0.00861329180013872	Down	0.00246827893840266	GO:0043231//intracellular membrane-bounded organelle;GO:0005634//nucleus	GO:0008289//lipid binding;GO:0003677//DNA binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0006351//transcription, DNA-templated	K09338//homeobox-leucine zipper protein	gi|460374745|ref|XP_004233170.1|//PREDICTED: homeobox-leucine zipper protein ATHB-14 isoform X2 [Solanum lycopersicum];gi|565372887|ref|XP_006353018.1|//PREDICTED: homeobox-leucine zipper protein ATHB-14 isoform X1 [Solanum tuberosum];gi|565396055|ref|XP_006363649.1|//PREDICTED: homeobox-leucine zipper protein ATHB-14-like [Solanum tuberosum]
Solyc08g083255.1.1	4243	888.660140823438	301.006872832546	-1.56183535211185	0.000315003822633045	Down	6.18665253262828e-05	NA	GO:0046872//metal ion binding;GO:0003993//acid phosphatase activity	GO:0016311//dephosphorylation	K13151//snurportin-1;K14407//cleavage stimulation factor subunit 2	gi|460399851|ref|XP_004245450.1|//PREDICTED: probable inactive purple acid phosphatase 27 [Solanum lycopersicum];gi|565353722|ref|XP_006343772.1|//PREDICTED: probable inactive purple acid phosphatase 27 [Solanum tuberosum]
Solyc08g007010.3.1	1802	2633.03272412644	939.957333867699	-1.48605827453872	2.86595908225321e-07	Down	3.02748175007663e-08	NA	NA	NA	K09015//Fe-S cluster assembly protein SufD	gi|460397979|ref|XP_004244542.1|//PREDICTED: protein ABCI7, chloroplastic [Solanum lycopersicum]
Solyc12g042900.2.1	900	1652.71821562959	4879.88192195199	1.56200546979435	1.04820511480923e-11	Up	5.43091214248111e-13	NA	NA	NA	K02265//cytochrome c oxidase subunit 5b	gi|460413916|ref|XP_004252321.1|//PREDICTED: putative cytochrome c oxidase subunit 5b-like [Solanum lycopersicum]
Solyc12g038630.2.1	1295	269.947173265234	1133.55618038165	2.07010687962996	0.000153643097129182	Up	2.8199590363206e-05	NA	NA	NA	NA	gi|970064463|ref|XP_015059199.1|//PREDICTED: uncharacterized protein LOC107005189 [Solanum pennellii]
Solyc07g055130.3.1	5492	951.282636139337	3669.26518459482	1.94754522474502	3.55000286750386e-10	Up	2.34611416582837e-11	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process	K04424//sterile alpha motif and leucine zipper containing kinase AZK [EC:2.7.11.25];K10268//F-box and leucine-rich repeat protein 2/20	gi|460395426|ref|XP_004243284.1|//PREDICTED: F-box/LRR-repeat MAX2 homolog A-like [Solanum lycopersicum];gi|460395424|ref|XP_004243283.1|//PREDICTED: serine/threonine-protein kinase EDR1-like [Solanum lycopersicum]
Solyc05g056500.1.1	1206	43.2304784757553	136.56935576988	1.65951309038685	0.0339795574960156	Up	0.0118930984377362	NA	NA	NA	K10260//F-box and WD-40 domain protein 7;K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K08332//vacuolar protein 8	gi|970028648|ref|XP_015075650.1|//PREDICTED: U-box domain-containing protein 26-like [Solanum pennellii]
BGI_novel_G000169	1928	37.9654507630512	7.41571030449878	-2.3560303462176	0.00373583540353606	Down	0.000965429657548661	NA	NA	NA	NA	gi|698578969|ref|XP_009776892.1|//PREDICTED: probable membrane-associated kinase regulator 4 [Nicotiana sylvestris]
Solyc06g051460.3.1	3822	711.541824016418	330.353413174936	-1.10693830946545	0.0287633950744152	Down	0.00980472819276602	NA	NA	NA	K03695//ATP-dependent Clp protease ATP-binding subunit ClpB	gi|460390640|ref|XP_004240936.1|//PREDICTED: uncharacterized protein LOC101252191 [Solanum lycopersicum]
Solyc01g073640.3.1	1048	11611.2508701183	594.264959858928	-4.28827327402846	1.05372399179523e-10	Down	6.37073324396850e-12	NA	GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K13070//momilactone-A synthase [EC:1.1.1.295];K09841//xanthoxin dehydrogenase [EC:1.1.1.288]	gi|350538977|ref|NP_001233856.1|//yfe37 protein [Solanum lycopersicum]
Solyc04g073950.1.1	1546	254.507406501659	1560.24375329434	2.61599188926903	1.56368134914322e-06	Up	1.90884762876251e-07	NA	NA	NA	K10761//tRNA(His) guanylyltransferase [EC:2.7.7.79]	gi|460384397|ref|XP_004237898.1|//PREDICTED: probable serine/threonine-protein kinase DDB_G0282963 [Solanum lycopersicum]
Solyc04g077470.3.1	3441	1471.68388456307	527.666253732962	-1.47977019024392	0.00709583983544894	Down	0.00198793544815992	NA	GO:0016740//transferase activity	NA	K20887	gi|460384734|ref|XP_004238064.1|//PREDICTED: probable xyloglucan glycosyltransferase 12 [Solanum lycopersicum]
Solyc02g082510.1.1	1278	784.427314799132	2441.83963869431	1.63825678021573	0.0105124621393296	Up	0.00308971089789078	NA	NA	NA	K14209//solute carrier family 36 (proton-coupled amino acid transporter)	gi|460373537|ref|XP_004232573.1|//PREDICTED: proton-coupled amino acid transporter 3-like [Solanum lycopersicum]
Solyc05g053610.2.1	4521	17.8518809890863	236.336951736174	3.72669721607565	0.000676578510638655	Up	0.000143950728296013	GO:0031224//intrinsic component of membrane	GO:0032559//adenyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity	GO:0009207//purine ribonucleoside triphosphate catabolic process;GO:0051234//establishment of localization	K05681//ATP-binding cassette, subfamily G (WHITE), member 2	gi|460388418|ref|XP_004239864.1|//PREDICTED: pleiotropic drug resistance protein 1-like [Solanum lycopersicum]
Solyc07g056460.3.1	974	106.122767829864	539.906851982134	2.3469763175413	1.24504324623508e-10	Up	7.59760202564753e-12	NA	GO:0016765//transferase activity, transferring alkyl or aryl (other than methyl) groups	GO:0009755//hormone-mediated signaling pathway	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|460395243|ref|XP_004243194.1|//PREDICTED: probable glutathione S-transferase [Solanum lycopersicum];gi|460395247|ref|XP_004243196.1|//PREDICTED: probable glutathione S-transferase [Solanum lycopersicum]
Solyc11g065210.3.1	2329	665.356853922087	245.263859353085	-1.43979365303928	2.55408707677736e-05	Down	3.95279914372283e-06	NA	GO:0016787//hydrolase activity;GO:0036459//thiol-dependent ubiquitinyl hydrolase activity	GO:0006511//ubiquitin-dependent protein catabolic process;GO:0016579//protein deubiquitination	K11841//ubiquitin carboxyl-terminal hydrolase 10 [EC:3.4.19.12]	gi|460411019|ref|XP_004250912.1|//PREDICTED: ubiquitin carboxyl-terminal hydrolase 24-like [Solanum lycopersicum]
Solyc03g006290.3.1	1146	10.039885851196	43.4563372670014	2.11382371495914	0.00109484872028293	Up	0.000245675760254332	NA	NA	NA	K17553//protein phosphatase 1 regulatory subunit 11	gi|460376630|ref|XP_004234100.1|//PREDICTED: uncharacterized protein LOC101254973 [Solanum lycopersicum]
Solyc01g090800.3.1	3408	191.934691861568	3.27139355908884	-5.87456635881483	3.51938303396262e-17	Down	8.90733964537282e-19	NA	NA	NA	K01647//citrate synthase [EC:2.3.3.1]	gi|460367848|ref|XP_004229782.1|//PREDICTED: cyclin-U2-1-like [Solanum lycopersicum]
Solyc08g082690.2.1	899	8234.10125536025	1841.74731685865	-2.16053604885498	1.2600453680578e-05	Down	1.82046214648577e-06	GO:0030529//intracellular ribonucleoprotein complex	GO:0003723//RNA binding;GO:0005198//structural molecule activity	GO:0010467//gene expression	K02990//small subunit ribosomal protein S6	gi|460399940|ref|XP_004245494.1|//PREDICTED: 30S ribosomal protein S6 alpha, chloroplastic [Solanum lycopersicum]
Solyc03g114740.3.1	2556	109.288553399816	466.03388009045	2.09229253607062	2.35544393872375e-06	Up	2.96783675096219e-07	NA	NA	NA	NA	gi|723687150|ref|XP_010318883.1|//PREDICTED: uncharacterized protein LOC101263300 isoform X2 [Solanum lycopersicum];gi|723687145|ref|XP_010318882.1|//PREDICTED: uncharacterized protein LOC101263300 isoform X1 [Solanum lycopersicum];gi|723687164|ref|XP_010318886.1|//PREDICTED: uncharacterized protein LOC101263300 isoform X4 [Solanum lycopersicum];gi|723687169|ref|XP_010318887.1|//PREDICTED: uncharacterized protein LOC101263300 isoform X5 [Solanum lycopersicum]
Solyc02g089497.1.1	321	3.15592820885856	17.7315168348168	2.49017966385809	0.0215982509720782	Up	0.00704189284526495	NA	NA	NA	NA	NA
Solyc06g035610.3.1	2865	266.272222808204	1065.83812912447	2.00101450854482	0.000463067141578555	Up	9.46225611351438e-05	NA	NA	NA	K14494//DELLA protein	gi|525314202|ref|NP_001266225.1|//Hop-interacting protein THI039 [Solanum lycopersicum]
Solyc06g051570.3.1	2618	218.973129129885	462.436338880513	1.07850092812808	0.018528417511448	Up	0.00588863900669234	NA	NA	NA	K15683//NF-X1-type zinc finger protein NFXL1	gi|460390650|ref|XP_004240941.1|//PREDICTED: NF-X1-type zinc finger protein NFXL2 [Solanum lycopersicum];gi|697155716|ref|XP_009586602.1|//PREDICTED: NF-X1-type zinc finger protein NFXL2 [Nicotiana tomentosiformis]
Solyc11g066120.2.1	2163	167.637622648949	53.0043047244553	-1.661164529687	0.0349858705450391	Down	0.0123026950470366	NA	NA	NA	K03217//YidC/Oxa1 family membrane protein insertase	gi|661887253|emb|CDP09033.1|//unnamed protein product [Coffea canephora];gi|970062836|ref|XP_015058326.1|//PREDICTED: inner membrane protein PPF-1, chloroplastic [Solanum pennellii]
Solyc05g006410.3.1	1281	66.3401983405975	19.8386585768473	-1.74156884657768	0.00875024369798781	Down	0.00251228932844558	NA	GO:0046872//metal ion binding	NA	K11855//ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12]	gi|723697108|ref|XP_010320630.1|//PREDICTED: zinc finger MYND domain-containing protein 15 isoform X1 [Solanum lycopersicum]
Solyc03g083990.1.1	372	0.405215857801062	5.06299432739204	3.64322832876269	0.0324932117095103	Up	0.0113086744346093	NA	NA	GO:0010876//lipid localization	K02883//large subunit ribosomal protein L18e;K11855//ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12]	gi|565404386|ref|XP_006367623.1|//PREDICTED: 14 kDa proline-rich protein DC2.15-like [Solanum tuberosum]
Solyc11g020040.2.1	2638	657.160124109238	74.6616268125241	-3.1378060923162	7.78606964186499e-06	Down	1.0868805281342e-06	NA	GO:0005515//protein binding;GO:0032559//adenyl ribonucleotide binding;GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	GO:0044267//cellular protein metabolic process;GO:0050896//response to stimulus	K03283//heat shock 70kDa protein 1/8	gi|929524253|ref|NP_001233780.2|//heat shock protein 70 [Solanum lycopersicum]
Solyc02g082450.3.1	1614	152.252391224003	1789.9156241776	3.55535478919585	5.59470633360757e-11	Up	3.25412188434747e-12	NA	NA	NA	K07088//uncharacterized protein	gi|460373557|ref|XP_004232583.1|//PREDICTED: uncharacterized transporter C5D6.04-like [Solanum lycopersicum]
Solyc08g065190.3.1	1945	1104.71358763873	2660.59940061201	1.26807892460755	0.049469021213259	Up	0.018474587085334	NA	NA	NA	K14709//solute carrier family 39 (zinc transporter), member 1/2/3	gi|460399141|ref|XP_004245100.1|//PREDICTED: zinc transporter 4, chloroplastic [Solanum lycopersicum]
Solyc12g019550.2.1	677	3680.05757725955	466.50991038115	-2.97974870385617	0.00216308559264035	Down	0.000521259443731171	NA	NA	NA	NA	gi|460413237|ref|XP_004252001.1|//PREDICTED: uncharacterized protein LOC101243677 [Solanum lycopersicum]
Solyc04g076550.3.1	1713	0.744995254369858	14.4230656213099	4.27500279603227	0.00933011928359294	Up	0.00270474291404003	NA	NA	NA	NA	gi|460384632|ref|XP_004238014.1|//PREDICTED: uncharacterized protein LOC101260131 isoform X1 [Solanum lycopersicum]
Solyc01g073910.3.1	1148	2939.78644310375	538.396040443047	-2.448971651191	3.52033251615226e-08	Down	3.14988349475662e-09	GO:0043231//intracellular membrane-bounded organelle	GO:0003677//DNA binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0006351//transcription, DNA-templated	K09338//homeobox-leucine zipper protein	gi|460366970|ref|XP_004229348.1|//PREDICTED: homeobox-leucine zipper protein HOX11-like [Solanum lycopersicum]
Solyc01g095490.3.1	909	324.407676432392	843.884016568652	1.37923677019597	0.00121697567888189	Up	0.00027521214566037	NA	GO:0016879//ligase activity, forming carbon-nitrogen bonds;GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding	GO:0006464//cellular protein modification process	K06689//ubiquitin-conjugating enzyme E2 D [EC:2.3.2.23]	gi|460368245|ref|XP_004229978.1|//PREDICTED: ubiquitin-conjugating enzyme E2 28 [Solanum lycopersicum]
Solyc08g068840.3.1	3832	148.098316948699	334.272092077979	1.17446766600839	0.00106227624897	Up	0.000237535232502274	NA	NA	NA	K15196//transcription factor IIIB 90 kDa subunit	gi|460399525|ref|XP_004245289.1|//PREDICTED: zinc finger CCCH domain-containing protein 22 [Solanum lycopersicum]
Solyc07g053120.3.1	3244	216.431910135239	667.374589149455	1.62458353383498	0.000224565664399409	Up	4.26647976533393e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|723715515|ref|XP_010323783.1|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 [Solanum lycopersicum]
Solyc06g060630.1.1	2526	70.6482604979198	2.73242849949235	-4.69239838899913	2.09851776442385e-06	Down	2.61806282895729e-07	GO:0031224//intrinsic component of membrane	GO:0015078//hydrogen ion transmembrane transporter activity	GO:0006811//ion transport	K10577//ubiquitin-conjugating enzyme E2 I	gi|970034996|ref|XP_015078828.1|//PREDICTED: cation/H(+) antiporter 15-like [Solanum pennellii]
Solyc04g017720.3.1	565	1100.17343531249	105.831277897821	-3.37789299654142	1.12424285669195e-16	Down	2.99205829610129e-18	NA	NA	NA	K03860//phosphatidylinositol glycan, class Q;K20887	gi|460381659|ref|XP_004236562.1|//PREDICTED: protein GAST1-like [Solanum lycopersicum]
Solyc03g005000.3.1	5308	1804.13512407896	508.979019010742	-1.82562930371482	3.98524540957894e-05	Down	6.39796182311633e-06	GO:0044464//cell part	GO:0004175//endopeptidase activity;GO:0004222//metalloendopeptidase activity	GO:0006508//proteolysis;GO:0019538//protein metabolic process	K07393//putative glutathione S-transferase	gi|723678460|ref|XP_010317387.1|//PREDICTED: uncharacterized protein LOC101249793 isoform X2 [Solanum lycopersicum];gi|970017280|ref|XP_015069768.1|//PREDICTED: protease HtpX homolog isoform X2 [Solanum pennellii];gi|970017276|ref|XP_015069766.1|//PREDICTED: protease HtpX homolog isoform X1 [Solanum pennellii];gi|460376422|ref|XP_004233997.1|//PREDICTED: uncharacterized protein LOC101249793 isoform X1 [Solanum lycopersicum]
Solyc01g009670.3.1	1740	512.398228947965	155.372200348811	-1.72153709356586	1.92197138984277e-06	Down	2.37989747914779e-07	NA	GO:0016779//nucleotidyltransferase activity;GO:0003676//nucleic acid binding	GO:0010467//gene expression	K00974//tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]	gi|460365102|ref|XP_004228444.1|//PREDICTED: putative CCA tRNA nucleotidyltransferase 2 [Solanum lycopersicum]
Solyc10g008520.3.1	2038	6945.97926767416	1742.233578903	-1.99524004749767	0.000996779230915515	Down	0.000221440443426885	NA	NA	NA	K14487//auxin responsive GH3 gene family	gi|460405370|ref|XP_004248149.1|//PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.5 [Solanum lycopersicum]
Solyc05g009820.3.1	2312	1170.91456408191	206.911528137311	-2.50054988053396	1.44223063592523e-06	Down	1.74338525134394e-07	NA	NA	NA	K20893	gi|460386556|ref|XP_004238964.1|//PREDICTED: probable galacturonosyltransferase-like 3 [Solanum lycopersicum]
Solyc02g062580.3.1	1484	492.988289847489	144.852278571199	-1.76697099925815	0.000369718586187498	Down	7.37244921355514e-05	NA	NA	NA	K07252//dolichyldiphosphatase [EC:3.6.1.43]	gi|723677736|ref|XP_010317222.1|//PREDICTED: lipid phosphate phosphatase epsilon 2, chloroplastic [Solanum lycopersicum]
Solyc07g017220.3.1	1143	2341.84101316662	629.770438258861	-1.89474519171678	2.47819585122122e-07	Down	2.58368637090568e-08	NA	NA	NA	NA	gi|460394597|ref|XP_004242888.1|//PREDICTED: uncharacterized protein LOC101257280 [Solanum lycopersicum]
Solyc03g098560.2.1	1530	0.348836699099208	3.93503905396531	3.49575422323178	0.0420730451342669	Up	0.0152639476146429	NA	NA	NA	NA	gi|460379470|ref|XP_004235485.1|//PREDICTED: uncharacterized protein LOC101267500 [Solanum lycopersicum]
Solyc08g061250.3.1	2597	28.9408310731118	174.78075488772	2.59436808198794	6.94788673840646e-09	Up	5.6068938380237e-10	NA	GO:0004672//protein kinase activity	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460399005|ref|XP_004245036.1|//PREDICTED: serine/threonine-protein kinase At5g01020 [Solanum lycopersicum]
Solyc02g069490.3.1	2148	26065.9813770857	881.327607922544	-4.88634596901248	5.08915758406117e-11	Down	2.93269629676404e-12	NA	GO:0003824//catalytic activity;GO:0050662//coenzyme binding	NA	K09828//Delta24-sterol reductase [EC:1.3.1.72 1.3.1.-]	gi|970009887|ref|XP_015065843.1|//PREDICTED: delta(24)-sterol reductase-like [Solanum pennellii]
Solyc06g084080.3.1	3053	34.5978979461022	8.39544889075944	-2.04300501628983	0.0223568219461701	Down	0.00733005091093307	NA	NA	NA	K14484//auxin-responsive protein IAA	gi|723711236|ref|XP_010323054.1|//PREDICTED: guanylate-binding protein 5-like [Solanum lycopersicum]
Solyc01g007120.3.1	3503	1560.75334308464	5143.55152858992	1.72052230211848	7.85620936430124e-08	Up	7.53174686334531e-09	NA	GO:0016301//kinase activity	NA	K07179//RIO kinase 2 [EC:2.7.11.1]	gi|460365471|ref|XP_004228625.1|//PREDICTED: serine/threonine-protein kinase rio2 [Solanum lycopersicum]
Solyc02g093410.3.1	2494	1379.40823686741	2837.55606109273	1.0405994090678	0.0247940294970392	Up	0.00826221200624463	NA	GO:0004674//protein serine/threonine kinase activity;GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0004702//receptor signaling protein serine/threonine kinase activity	GO:0006464//cellular protein modification process;GO:0006468//protein phosphorylation	K04427//mitogen-activated protein kinase kinase kinase 7 [EC:2.7.11.25];K17535//serine/threonine-protein kinase TNNI3K [EC:2.7.11.1];K04365//B-Raf proto-oncogene serine/threonine-protein kinase [EC:2.7.11.1]	gi|460372042|ref|XP_004231843.1|//PREDICTED: serine/threonine-protein kinase HT1-like [Solanum lycopersicum];gi|460372040|ref|XP_004231842.1|//PREDICTED: NAC domain-containing protein 8 [Solanum lycopersicum]
Solyc03g042560.2.1	1398	0.389815309562995	6.52609533325658	4.06535740541999	0.012348879631313	Up	0.00370217827921018	GO:0044424//intracellular part	GO:0016840//carbon-nitrogen lyase activity	GO:0006558//L-phenylalanine metabolic process	K10775//phenylalanine ammonia-lyase [EC:4.3.1.24]	gi|723680539|ref|XP_004234632.2|//PREDICTED: phenylalanine ammonia-lyase [Solanum lycopersicum]
Solyc08g081520.1.1	1218	18.380493661471	77.5099116560752	2.07620529332152	0.00227912340816837	Up	0.000551770781871684	NA	NA	NA	NA	gi|460400089|ref|XP_004245568.1|//PREDICTED: uncharacterized protein LOC101246948 [Solanum lycopersicum]
Solyc04g072785.1.1	562	33.6800399536327	9.31422485239288	-1.85438623439711	0.0114681365760685	Down	0.00340521753261375	NA	NA	NA	NA	gi|460384369|ref|XP_004237884.1|//PREDICTED: uncharacterized protein LOC101246821 [Solanum lycopersicum]
Solyc12g014160.2.1	527	74.7631453377179	12.6219685169879	-2.56639033555779	0.00591541260359572	Down	0.00161864633677487	NA	NA	NA	K08237//hydroquinone glucosyltransferase [EC:2.4.1.218];K17982//geranyllinalool synthase [EC:4.2.3.144]	gi|970068293|ref|XP_015061272.1|//PREDICTED: uncharacterized protein ycf45-like [Solanum pennellii];gi|970066248|ref|XP_015060102.1|//PREDICTED: uncharacterized protein LOC107005976 [Solanum pennellii]
Solyc08g075510.3.1	1712	139.193930860589	55.19427024156	-1.33450589547142	0.0217421537088596	Down	0.00709529430897068	NA	NA	NA	K19219//jumonji domain-containing protein 7	gi|460400971|ref|XP_004246003.1|//PREDICTED: jmjC domain-containing protein 7 [Solanum lycopersicum]
Solyc12g049030.1.1	1155	275.527103726703	3351.28239378718	3.60444711003283	1.26407495162371e-05	Up	1.82861552424595e-06	NA	GO:0016705//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	GO:0044238//primary metabolic process	K10256//omega-6 fatty acid desaturase / acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.6 1.14.19.22]	gi|460414043|ref|XP_004252384.1|//PREDICTED: omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2-like [Solanum lycopersicum]
Solyc02g080060.1.1	1104	1.48335472375596	13.9363685287038	3.23191913498441	0.0088521410465406	Up	0.00254441913572711	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723678186|ref|XP_010317315.1|//PREDICTED: cysteine-rich repeat secretory protein 38-like [Solanum lycopersicum]
Solyc06g050900.3.1	2058	407.644623202162	12.5121766502262	-5.02590729475266	1.99380365072626e-12	Down	9.28231981421315e-14	GO:0044464//cell part	NA	GO:0015833//peptide transport	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460390580|ref|XP_004240906.1|//PREDICTED: protein NRT1/ PTR FAMILY 5.1 isoform X1 [Solanum lycopersicum]
Solyc01g007080.3.1	1836	12.8719533336773	0.411659636910562	-4.96663519074484	0.000823386597037046	Down	0.000179225552045969	NA	NA	NA	K03695//ATP-dependent Clp protease ATP-binding subunit ClpB	gi|460366056|ref|XP_004228909.1|//PREDICTED: aluminum-activated malate transporter 8-like isoform X1 [Solanum lycopersicum]
Solyc07g006040.3.1	461	170.187408383074	9.05236616811865	-4.23268554761379	1.2987961017944e-12	Down	5.87237092394742e-14	NA	NA	NA	NA	gi|698455416|ref|XP_009780393.1|//PREDICTED: uncharacterized protein LOC104229440 [Nicotiana sylvestris]
Solyc02g088630.3.1	2983	1026.36514341852	5038.35613415138	2.29540902125577	7.61791523957094e-08	Up	7.29477570093102e-09	NA	NA	NA	K13648//alpha-1,4-galacturonosyltransferase [EC:2.4.1.43];K20867	gi|460372727|ref|XP_004232177.1|//PREDICTED: probable galacturonosyltransferase 14 [Solanum lycopersicum];gi|697189685|ref|XP_009603903.1|//PREDICTED: probable galacturonosyltransferase 14 [Nicotiana tomentosiformis]
Solyc03g117490.3.1	2000	519.186443154687	2382.34125041265	2.19805546426603	0.000398204262975621	Up	8.00327041137823e-05	NA	GO:0016301//kinase activity	GO:0006071//glycerol metabolic process;GO:0006796//phosphate-containing compound metabolic process	K00864//glycerol kinase [EC:2.7.1.30]	gi|460380312|ref|XP_004235901.1|//PREDICTED: glycerol kinase [Solanum lycopersicum]
Solyc12g089160.2.1	3022	935.329572583253	3394.21847911873	1.8595327237952	0.00471404531965217	Up	0.00125058803114128	NA	GO:0003824//catalytic activity	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13415//protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1]	gi|460414967|ref|XP_004252832.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g16250 [Solanum lycopersicum]
Solyc08g080940.3.1	1115	3125.77236472053	18166.4818843471	2.53899443212491	6.61202244329901e-07	Up	7.44308475427278e-08	GO:0044424//intracellular part	GO:0016705//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen;GO:0004601//peroxidase activity	GO:0008152//metabolic process;GO:0006950//response to stress	K00432//glutathione peroxidase [EC:1.11.1.9]	gi|970047486|ref|XP_015085272.1|//PREDICTED: probable phospholipid hydroperoxide glutathione peroxidase [Solanum pennellii]
Solyc09g031900.3.1	1050	99.0344652882468	258.871130069145	1.3862314869699	0.00265593508694333	Up	0.000657024085051902	NA	NA	NA	NA	gi|460402946|ref|XP_004246968.1|//PREDICTED: uncharacterized protein LOC101268219 [Solanum lycopersicum]
Solyc10g017580.3.1	2103	863.515551066297	3342.12007584812	1.9524695029255	4.76977550901595e-05	Up	7.75879689926406e-06	NA	NA	NA	K09480//digalactosyldiacylglycerol synthase [EC:2.4.1.241]	gi|460406245|ref|XP_004248577.1|//PREDICTED: digalactosyldiacylglycerol synthase 2, chloroplastic-like [Solanum lycopersicum]
Solyc08g067425.1.1	1611	13.6336403401934	0.527690762823774	-4.6913342901608	0.00258428978174847	Down	0.000636632293408962	NA	NA	NA	K12603//CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]	gi|723722954|ref|XP_010325137.1|//PREDICTED: carbon catabolite repressor protein 4 homolog 6 isoform X3 [Solanum lycopersicum]
Solyc05g051900.3.1	1795	295.412332564231	634.605835498935	1.10313073209617	0.012287757201228	Up	0.00368202177354525	NA	NA	NA	K08193//MFS transporter, ACS family, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), other;K13783//MFS transporter, OPA family, solute carrier family 37 (glycerol-3-phosphate transporter), member 1/2	gi|698510019|ref|XP_009800196.1|//PREDICTED: uncharacterized protein LOC104246138 isoform X1 [Nicotiana sylvestris];gi|460388672|ref|XP_004239990.1|//PREDICTED: uncharacterized protein LOC101247024 [Solanum lycopersicum]
Solyc01g080800.3.1	656	161.143667296108	1229.9516818897	2.93218224216057	2.02465865014254e-08	Up	1.74331350895679e-09	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460367276|ref|XP_004229501.1|//PREDICTED: uncharacterized protein LOC101249488 [Solanum lycopersicum]
Solyc02g091700.3.1	1078	131.644242181364	2448.03694098054	4.21690900083496	2.20678288083228e-11	Up	1.203415593655e-12	NA	NA	NA	NA	gi|971569340|ref|XP_015169122.1|//PREDICTED: uncharacterized protein At5g65660 isoform X1 [Solanum tuberosum]
Solyc02g077710.1.1	1029	5834.47768132132	890.379219150021	-2.7121116809815	8.79799531950253e-06	Down	1.2412558626926e-06	NA	NA	NA	NA	gi|460374235|ref|XP_004232917.1|//PREDICTED: homeobox protein 2-like [Solanum lycopersicum]
Solyc09g063015.1.1	944	124.998299518083	38.0431910197715	-1.71619830052678	0.0177851813582434	Down	0.00562035066181554	NA	NA	NA	K16189//phytochrome-interacting factor 4	gi|460403257|ref|XP_004247109.1|//PREDICTED: transcription factor PIF1-like [Solanum lycopersicum]
Solyc03g082740.3.1	1306	228.570121213105	89.9872667251611	-1.3448440477261	0.00763836189825426	Down	0.00215957115693524	NA	NA	NA	NA	gi|460378470|ref|XP_004234994.1|//PREDICTED: protein yippee-like At4g27745 [Solanum lycopersicum]
Solyc11g065010.1.1	1044	15.1880794882736	3.67856398429126	-2.04572486390161	0.0483277660623555	Down	0.017968893188907	NA	NA	NA	NA	gi|723744726|ref|XP_010313247.1|//PREDICTED: uncharacterized protein LOC104644748 [Solanum lycopersicum]
Solyc06g069820.3.1	1018	157.335412860222	74.9002690311923	-1.07080062155627	0.0330714720205016	Down	0.0115358146402212	NA	NA	NA	K01592//tyrosine decarboxylase [EC:4.1.1.25]	gi|460391951|ref|XP_004241581.1|//PREDICTED: uncharacterized protein LOC101254212 [Solanum lycopersicum]
Solyc06g061200.1.1	912	140.945184359789	11.0759385457019	-3.66963332730583	0.000381721202760404	Down	7.63641604001449e-05	NA	NA	NA	NA	gi|970036920|ref|XP_015079808.1|//PREDICTED: glycine-rich cell wall structural protein 1.8-like [Solanum pennellii]
Solyc03g119920.1.1	3156	215.247108130999	68.7974809035208	-1.64556620986344	0.00197129857344631	Down	0.000470266545029686	NA	NA	NA	K10581//ubiquitin-conjugating enzyme E2 O [EC:2.3.2.24]	gi|460379961|ref|XP_004235727.1|//PREDICTED: uncharacterized protein LOC101255778 [Solanum lycopersicum]
Solyc10g086137.1.1	1818	9.77834138889924	0.822685052656457	-3.57117763812305	0.0161685775359232	Down	0.00503354553377182	NA	NA	GO:0050896//response to stimulus	K10523//speckle-type POZ protein	gi|460408809|ref|XP_004249834.1|//PREDICTED: BTB/POZ domain-containing protein At5g03250-like [Solanum lycopersicum]
Solyc07g064950.3.1	2225	3111.93731715222	661.068317281242	-2.23494172275961	1.01657825659591e-09	Down	7.21532118839254e-11	NA	GO:0016859//cis-trans isomerase activity	GO:0006810//transport;GO:0044267//cellular protein metabolic process	NA	gi|460397064|ref|XP_004244088.1|//PREDICTED: trigger factor-like protein TIG, Chloroplastic [Solanum lycopersicum]
Solyc10g086240.2.1	1579	775.651434264439	190.912914142713	-2.0224937773167	0.000807389019837286	Down	0.000175363643156101	NA	NA	NA	K13692//UDP-glucose:(indol-3-yl)acetate beta-D-glucosyltransferase [EC:2.4.1.121];K13950//para-aminobenzoate synthetase [EC:2.6.1.85];K13691//pathogen-inducible salicylic acid glucosyltransferase [EC:2.4.1.-]	gi|460408376|ref|XP_004249621.1|//PREDICTED: UDP-glycosyltransferase 86A1-like [Solanum lycopersicum]
Solyc03g026340.3.1	465	48.2886519767852	280.126642373429	2.5363231072407	8.73756292782644e-05	Up	1.50695928384721e-05	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process	K13412//calcium-dependent protein kinase [EC:2.7.11.1];K04515//calcium/calmodulin-dependent protein kinase (CaM kinase) II [EC:2.7.11.17]	gi|723679403|ref|XP_010317567.1|//PREDICTED: calcium-dependent protein kinase 26 [Solanum lycopersicum]
Solyc03g113460.1.1	801	117.318248618347	44.3116373407436	-1.404669897801	0.00691012442628787	Down	0.00192689133864095	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K09841//xanthoxin dehydrogenase [EC:1.1.1.288]	gi|460380863|ref|XP_004236173.1|//PREDICTED: (-)-isopiperitenol/(-)-carveol dehydrogenase, mitochondrial-like [Solanum lycopersicum]
Solyc02g087280.3.1	2387	432.135845624951	81.850158744669	-2.40042778744354	0.0112992680182286	Down	0.00335212741005969	GO:0016021//integral component of membrane	GO:0005215//transporter activity	GO:0006810//transport	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460372905|ref|XP_004232263.1|//PREDICTED: protein NRT1/ PTR FAMILY 5.8-like [Solanum lycopersicum]
Solyc01g102750.3.1	1310	926.050594841426	455.335974016078	-1.02415957277981	0.000541505925324705	Down	0.000112507605030561	NA	GO:0046914//transition metal ion binding	NA	K11446//histone demethylase JARID1 [EC:1.14.11.-]	gi|460369089|ref|XP_004230396.1|//PREDICTED: PHD finger protein Alfin1 [Solanum lycopersicum]
Solyc08g048290.3.1	2152	351.487928806966	95.0289533231203	-1.8870360991324	0.00366571905653741	Down	0.000945123703372197	GO:0031224//intrinsic component of membrane	GO:0022857//transmembrane transporter activity	GO:0006810//transport	K08150//MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13	gi|460398959|ref|XP_004245014.1|//PREDICTED: probable inositol transporter 2 isoform X1 [Solanum lycopersicum];gi|723721285|ref|XP_010324906.1|//PREDICTED: probable inositol transporter 2 isoform X3 [Solanum lycopersicum]
Solyc01g105600.3.1	798	14.4543469938375	78.5797865017353	2.44265481461398	2.0332842395263e-06	Up	2.52834211385856e-07	NA	NA	NA	NA	gi|460369542|ref|XP_004230621.1|//PREDICTED: uncharacterized protein LOC101265869 [Solanum lycopersicum]
Solyc04g080520.1.1	1842	234.068552349418	114.964905527044	-1.02573759035988	0.0097289194575734	Down	0.00283512346501077	NA	NA	NA	NA	gi|723695809|ref|XP_010320396.1|//PREDICTED: cell wall protein DAN4 [Solanum lycopersicum]
Solyc03g114450.3.1	1570	23590.5050298258	385.454083200357	-5.93550348326714	3.0311505780781e-42	Down	8.02190588353753e-45	GO:0009534//chloroplast thylakoid	NA	GO:0051592//response to calcium ion;GO:0010119//regulation of stomatal movement	K17525//chitinase domain-containing protein 1	gi|460380709|ref|XP_004236097.1|//PREDICTED: calcium sensing receptor, chloroplastic [Solanum lycopersicum]
Solyc10g008170.3.1	1081	32.632210937012	0.815122124163359	-5.32313670308352	7.90747502673369e-06	Down	1.10559634804227e-06	NA	NA	GO:0019222//regulation of metabolic process	K03028//26S proteasome regulatory subunit N1	gi|460406037|ref|XP_004248480.1|//PREDICTED: 26S proteasome non-ATPase regulatory subunit 2 homolog A [Solanum lycopersicum]
Solyc12g008890.2.1	3320	961.854603279268	189.267700682686	-2.34539059836545	1.05814115532356e-10	Down	6.40138323799815e-12	GO:0016021//integral component of membrane	GO:0019139//cytokinin dehydrogenase activity;GO:0016614//oxidoreductase activity, acting on CH-OH group of donors;GO:0050660//flavin adenine dinucleotide binding	GO:0009690//cytokinin metabolic process;GO:0055114//oxidation-reduction process	K00279//cytokinin dehydrogenase [EC:1.5.99.12]	gi|723747716|ref|XP_010313754.1|//PREDICTED: zinc finger CCCH domain-containing protein 64 [Solanum lycopersicum];gi|460412568|ref|XP_004251670.1|//PREDICTED: cytokinin dehydrogenase 3 [Solanum lycopersicum];gi|383212276|dbj|BAM09008.1|//cytokinin oxidase/dehydrogenase-like, partial [Solanum lycopersicum]
Solyc06g005755.1.1	673	226.725691842337	2.61492847869104	-6.43803258414242	4.60946655415171e-18	Down	1.04120200231696e-19	GO:0031224//intrinsic component of membrane	GO:0046914//transition metal ion binding;GO:0003824//catalytic activity	GO:0006631//fatty acid metabolic process	K14424//4-alpha-methyl-delta7-sterol-4alpha-methyl oxidase [EC:1.14.13.72]	gi|565385653|ref|XP_006358705.1|//PREDICTED: methylsterol monooxygenase 2-2-like [Solanum tuberosum]
Solyc05g008440.2.1	1484	774.224582343259	2078.74540198362	1.42488905202574	1.13257166482878e-05	Up	1.6227842103779e-06	NA	NA	NA	K13172//serine/arginine repetitive matrix protein 2	gi|460386366|ref|XP_004238869.1|//PREDICTED: sarcoplasmic reticulum histidine-rich calcium-binding protein [Solanum lycopersicum]
Solyc04g079260.3.1	1959	1.22005694667282	564.167734928395	8.85303186175319	3.97049490895625e-28	Up	3.2263601094098e-30	NA	NA	NA	K16815//calcium-independent phospholipase A2-gamma	gi|460384966|ref|XP_004238177.1|//PREDICTED: patatin-like protein 2 [Solanum lycopersicum]
Solyc08g065430.3.1	1298	1249.88914117201	3612.87309700605	1.53134643983877	1.08356939278566e-05	Up	1.54772547828934e-06	NA	NA	NA	K18266//protein NDRG1	gi|460399161|ref|XP_004245110.1|//PREDICTED: pollen-specific protein SF21-like [Solanum lycopersicum]
Solyc06g066530.1.1	576	22.9797630887099	0.523698946944098	-5.45548241046827	0.000169527915667777	Down	3.14279431795323e-05	NA	NA	NA	NA	gi|460392284|ref|XP_004241747.1|//PREDICTED: uncharacterized protein LOC101252498 [Solanum lycopersicum]
Solyc03g115100.3.1	2660	1252.71661424875	540.571950342921	-1.21250153033389	0.000134345589048448	Down	2.424710534414e-05	NA	NA	NA	K01051//pectinesterase [EC:3.1.1.11]	gi|460380611|ref|XP_004236048.1|//PREDICTED: uncharacterized protein LOC101254467 [Solanum lycopersicum]
Solyc03g044830.3.1	2214	3.95893629398921	88.8042645739598	4.48744420233986	1.46878952477186e-10	Up	9.09918067008662e-12	NA	NA	NA	K10260//F-box and WD-40 domain protein 7;K03362//F-box and WD-40 domain protein 1/11;K14963//COMPASS component SWD3;K16794//platelet-activating factor acetylhydrolase IB subunit alpha	gi|460377805|ref|XP_004234678.1|//PREDICTED: myosin heavy chain kinase B-like [Solanum lycopersicum]
Solyc03g120980.3.1	5337	2167.07004112073	4588.37059714377	1.08223613776116	0.0252678966948493	Up	0.00845779455493316	GO:0044464//cell part	GO:0032559//adenyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity	GO:0009207//purine ribonucleoside triphosphate catabolic process	K05681//ATP-binding cassette, subfamily G (WHITE), member 2	gi|460379795|ref|XP_004235646.1|//PREDICTED: ABC transporter G family member 36-like [Solanum lycopersicum]
Solyc12g088040.2.1	2021	62.2686376495301	809.865713763536	3.70110508975451	4.14953010367542e-10	Up	2.76862191947928e-11	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460414743|ref|XP_004252723.1|//PREDICTED: wall-associated receptor kinase-like 20 [Solanum lycopersicum]
Solyc08g006690.1.1	585	134.887501123332	33.2979150079662	-2.01825292318853	0.00622971946256573	Down	0.00171510019198265	NA	GO:0030234//enzyme regulator activity	NA	K01051//pectinesterase [EC:3.1.1.11]	gi|723719715|ref|XP_004244511.2|//PREDICTED: 21 kDa protein-like [Solanum lycopersicum]
Solyc02g093050.3.1	1775	563.702209741101	4712.84771922488	3.06359393793679	3.72120469101235e-20	Up	6.81046482513443e-22	NA	NA	NA	K13426//WRKY transcription factor 29;K13425//WRKY transcription factor 22	gi|460372102|ref|XP_004231871.1|//PREDICTED: probable WRKY transcription factor 7 [Solanum lycopersicum]
Solyc08g080400.1.1	2040	221.239746658185	40.0198951123871	-2.46682130391522	0.00216019877785303	Down	0.000520402739722085	NA	NA	NA	K14494//DELLA protein	gi|460400243|ref|XP_004245645.1|//PREDICTED: scarecrow-like protein 28 [Solanum lycopersicum]
Solyc05g056100.3.1	2393	993.959625450792	2951.86087265381	1.57036556983137	5.54863369891198e-09	Up	4.41566011151673e-10	NA	NA	NA	NA	gi|460388021|ref|XP_004239670.1|//PREDICTED: double-stranded RNA-binding protein 2-like [Solanum lycopersicum]
Solyc03g095220.3.1	2014	3679.94301204884	1541.60148214624	-1.25525356093994	0.00884521914043489	Down	0.00254166521371748	GO:0009527//plastid outer membrane	GO:0008320//protein transmembrane transporter activity;GO:0032561//guanyl ribonucleotide binding	GO:0015031//protein transport	K08819//cyclin-dependent kinase 12/13 [EC:2.7.11.22 2.7.11.23]	gi|460378906|ref|XP_004235208.1|//PREDICTED: translocase of chloroplast 34 [Solanum lycopersicum]
Solyc01g111260.2.1	1473	316.285019854824	2204.2671646395	2.80100196152305	4.62862550966336e-07	Up	5.06547058907545e-08	NA	GO:0004620//phospholipase activity;GO:0042578//phosphoric ester hydrolase activity	GO:0007165//signal transduction;GO:0044238//primary metabolic process	K01771//1-phosphatidylinositol phosphodiesterase [EC:4.6.1.13]	gi|460370345|ref|XP_004231013.1|//PREDICTED: uncharacterized protein LOC101258415 [Solanum lycopersicum]
Solyc08g077330.3.1	1168	110.039251801819	1158.1430703144	3.3957233460722	0.000165448537314673	Up	3.05637002732787e-05	NA	NA	NA	K20628	gi|460400679|ref|XP_004245860.1|//PREDICTED: expansin-like B1 [Solanum lycopersicum]
Solyc06g011580.1.1	3501	245.829266805821	995.023767014999	2.01707430244307	0.00389265990348852	Up	0.00100987449412107	NA	NA	NA	K07466//replication factor A1	gi|565396490|ref|XP_006363851.1|//PREDICTED: uncharacterized protein LOC102602462 isoform X1 [Solanum tuberosum]
Solyc10g061960.2.1	2620	545.287459351995	1165.6148157312	1.09600223872002	0.0228454934630828	Up	0.00751463643144118	NA	NA	NA	K19755//radial spoke head protein 1;K19530//junctophilin;K00889//1-phosphatidylinositol-4-phosphate 5-kinase [EC:2.7.1.68]	gi|460407077|ref|XP_004248983.1|//PREDICTED: uncharacterized protein LOC101257910 [Solanum lycopersicum]
Solyc11g072230.1.1	1236	7.44954364963495	38.5402217142044	2.37114091561731	0.00146288576034304	Up	0.00033785746872989	NA	GO:0016787//hydrolase activity	NA	K19891//glucan endo-1,3-beta-glucosidase 1/2/3 [EC:3.2.1.39]	gi|460412105|ref|XP_004251443.1|//PREDICTED: glucan endo-1,3-beta-glucosidase [Solanum lycopersicum]
Solyc05g005180.3.1	1748	1453.86195625328	278.558315031371	-2.38383900577187	1.5238431540421e-06	Down	1.85510352657726e-07	NA	GO:0016833//oxo-acid-lyase activity	GO:0009233//menaquinone metabolic process	K01661//naphthoate synthase [EC:4.1.3.36]	gi|460385924|ref|XP_004238650.1|//PREDICTED: 1,4-Dihydroxy-2-naphthoyl-CoA synthase, peroxisomal [Solanum lycopersicum]
Solyc04g005450.3.1	2454	1114.8251011451	2824.45260928106	1.34115390298112	0.0114888835438157	Up	0.00341195597645567	NA	GO:0016787//hydrolase activity	NA	K14407//cleavage stimulation factor subunit 2	gi|460382653|ref|XP_004237052.1|//PREDICTED: probable inactive purple acid phosphatase 2 [Solanum lycopersicum]
Solyc07g005130.3.1	1369	128.68195712533	530.439068975122	2.04337725643261	4.34439140216537e-09	Up	3.40873113968917e-10	NA	NA	NA	K06889//uncharacterized protein	gi|460393937|ref|XP_004242564.1|//PREDICTED: alpha/beta hydrolase domain-containing protein 17B [Solanum lycopersicum]
Solyc04g057830.1.1	621	27.8932097069484	1976.58106814265	6.14694936064903	8.69990569337199e-34	Up	4.63726895091768e-36	NA	NA	NA	NA	gi|723691876|ref|XP_010319727.1|//PREDICTED: uncharacterized protein LOC104646915 [Solanum lycopersicum]
Solyc03g122090.3.1	1210	730.555270300246	1990.00844698535	1.44570922494432	7.36373683216295e-07	Up	8.36064648530205e-08	GO:0031224//intrinsic component of membrane	NA	GO:0006810//transport	K08517//vesicle transport protein SEC22	gi|568214866|ref|NP_001275228.1|//uncharacterized protein LOC102577571 [Solanum tuberosum]
Solyc04g071930.3.1	820	4568.03576041281	552.274191449313	-3.04811732981337	7.16612924383014e-27	Down	6.73126796423586e-29	NA	NA	NA	NA	gi|460384253|ref|XP_004237827.1|//PREDICTED: probable inactive serine/threonine-protein kinase slob1 [Solanum lycopersicum]
Solyc01g056340.3.1	2385	628.045799209763	293.047419990201	-1.0997356333172	9.37310479035691e-06	Down	1.32588835095439e-06	GO:0043231//intracellular membrane-bounded organelle;GO:0005634//nucleus	GO:0005515//protein binding;GO:0003824//catalytic activity;GO:0005488//binding	GO:0007602//phototransduction;GO:0009585//red, far-red light phototransduction	K10571//de-etiolated-1	gi|723656854|ref|XP_010318756.1|//PREDICTED: light-mediated development protein DET1 isoform X1 [Solanum lycopersicum];gi|350534582|ref|NP_001234148.1|//light-mediated development protein DET1 [Solanum lycopersicum]
Solyc09g083360.3.1	2574	672.746682235692	4112.19547859789	2.61177357045945	1.73508319903799e-06	Up	2.1348999701895e-07	NA	NA	NA	K02958//small subunit ribosomal protein S15e	gi|460404355|ref|XP_004247648.1|//PREDICTED: transcription factor bHLH92 [Solanum lycopersicum]
Solyc01g014230.3.1	3196	601.108041760925	2289.59629922656	1.92939701928312	3.51181011758174e-09	Up	2.70441318880419e-10	GO:0043234//protein complex	GO:0019787//ubiquitin-like protein transferase activity	GO:0032446//protein modification by small protein conjugation	K08332//vacuolar protein 8	gi|723654547|ref|XP_010319902.1|//PREDICTED: U-box domain-containing protein 4-like [Solanum lycopersicum]
Solyc04g011480.3.1	824	0.804370099114959	75.4815417311386	6.55212062718103	5.66982865306169e-10	Up	3.87174820799501e-11	GO:0016020//membrane	NA	GO:0006970//response to osmotic stress;GO:0006952//defense response;GO:0002239//response to oomycetes;GO:0009725//response to hormone	NA	gi|460382045|ref|XP_004236750.1|//PREDICTED: CASP-like protein PIMP1 [Solanum lycopersicum]
Solyc10g077040.2.1	2238	42663.2632646355	1284.42649560667	-5.05379808398449	9.00286699407915e-23	Down	1.27519362522368e-24	NA	GO:0016709//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen;GO:0046914//transition metal ion binding	GO:0006779//porphyrin-containing compound biosynthetic process	K04035//magnesium-protoporphyrin IX monomethyl ester (oxidative) cyclase [EC:1.14.13.81]	gi|460407317|ref|XP_004249099.1|//PREDICTED: magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase, chloroplastic [Solanum lycopersicum]
Solyc02g088470.1.1	1809	685.720093592372	104.72262167923	-2.71104667797498	1.21151021441804e-06	Down	1.44642433904166e-07	NA	NA	NA	K01074//palmitoyl-protein thioesterase [EC:3.1.2.22];K19090//CRISPR-associated protein Cas5t;K19589//release factor glutamine methyltransferase [EC:2.1.1.297];K17710//pentatricopeptide repeat domain-containing protein 1	gi|460372755|ref|XP_004232191.1|//PREDICTED: pentatricopeptide repeat-containing protein At3g29230 [Solanum lycopersicum]
Solyc02g064550.3.1	1764	2974.29189675856	1388.05986687896	-1.09947644776289	0.0361507871940528	Down	0.0127689302016865	NA	NA	NA	K10878//meiotic recombination protein SPO11;K15717//prostamide/prostaglandin F2alpha synthase [EC:1.11.1.20]	gi|460375341|ref|XP_004233465.1|//PREDICTED: prostamide/prostaglandin F synthase [Solanum lycopersicum]
Solyc11g010130.2.1	2060	69.4419257763418	27.6700825154544	-1.32748001118184	0.0251942207601823	Down	0.0084246814685998	NA	GO:0004674//protein serine/threonine kinase activity;GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process;GO:0006468//protein phosphorylation	K14498//serine/threonine-protein kinase SRK2 [EC:2.7.11.1]	gi|723741515|ref|XP_010312635.1|//PREDICTED: serine/threonine-protein kinase SAPK2 [Solanum lycopersicum]
Solyc07g006630.3.1	1344	4145.58886352203	31.27181602857	-7.05057023241484	4.67896828003673e-106	Down	5.23218459822208e-110	GO:0044464//cell part	GO:0046914//transition metal ion binding	NA	K12135//zinc finger protein CONSTANS	gi|350535390|ref|NP_001234448.1|//CONSTANS-like protein [Solanum lycopersicum]
Solyc04g058040.2.1	3421	21.6482411077893	3.73409581739746	-2.53541895966699	0.00661975114099657	Down	0.00183753118931718	NA	NA	NA	K05909//laccase [EC:1.10.3.2]	gi|723691781|ref|XP_010319707.1|//PREDICTED: laccase-14-like isoform X2 [Solanum lycopersicum]
Solyc12g039070.2.1	1324	413.501337350471	4.46514444295094	-6.53304133931753	1.75147175404423e-11	Down	9.34231429863313e-13	NA	NA	NA	K01757//strictosidine synthase [EC:4.3.3.2]	gi|460413789|ref|XP_004252261.1|//PREDICTED: strictosidine synthase 3-like [Solanum lycopersicum]
Solyc01g086970.3.1	1322	1429.10165645095	3150.62280170989	1.14052849914602	0.00250092959535522	Up	0.000614048561776814	NA	GO:0046914//transition metal ion binding;GO:0003676//nucleic acid binding	NA	NA	gi|460367505|ref|XP_004229614.1|//PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 8 [Solanum lycopersicum]
Solyc05g006930.3.1	2255	364.890906268624	122.294613055702	-1.57710434071795	0.000471621091652863	Down	9.6563838394557e-05	NA	NA	NA	K07199//5'-AMP-activated protein kinase, regulatory beta subunit;K07200//5'-AMP-activated protein kinase, regulatory gamma subunit	gi|460386147|ref|XP_004238761.1|//PREDICTED: uncharacterized protein LOC101254994 [Solanum lycopersicum]
Solyc06g054310.1.1	789	34.4844304680396	118.47221935732	1.78053175502653	0.00348356295659671	Up	0.000890497791722836	NA	NA	NA	K20642;K09528//DnaJ homolog subfamily C member 8	gi|723706689|ref|XP_010322261.1|//PREDICTED: protein FANTASTIC FOUR 3-like [Solanum lycopersicum]
Solyc08g077200.3.1	2051	1677.17006288259	334.223736282555	-2.32714288262473	8.08878760047825e-12	Down	4.09444370115158e-13	NA	GO:0046872//metal ion binding;GO:0016778//diphosphotransferase activity	GO:0009124//nucleoside monophosphate biosynthetic process;GO:0006796//phosphate-containing compound metabolic process	K00948//ribose-phosphate pyrophosphokinase [EC:2.7.6.1]	gi|460400709|ref|XP_004245875.1|//PREDICTED: ribose-phosphate pyrophosphokinase 1 [Solanum lycopersicum];gi|970048306|ref|XP_015085697.1|//PREDICTED: ribose-phosphate pyrophosphokinase 1 [Solanum pennellii]
Solyc06g008220.3.1	1338	2596.41679044373	707.202144132092	-1.876327437017	0.00117837524333202	Down	0.000266131489464318	NA	NA	NA	K00655//1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51];K00434//L-ascorbate peroxidase [EC:1.11.1.11]	gi|460389688|ref|XP_004240482.1|//PREDICTED: DAG protein, chloroplastic-like [Solanum lycopersicum]
Solyc08g076390.3.1	3404	858.99178030117	2607.19182495333	1.60178050213437	7.2632465345123e-06	Up	1.00550535370429e-06	NA	NA	NA	K11446//histone demethylase JARID1 [EC:1.14.11.-]	gi|723725673|ref|XP_010325573.1|//PREDICTED: lysine-specific demethylase JMJ706-like [Solanum lycopersicum]
Solyc04g072235.1.1	4342	1021.66287558171	253.809256574308	-2.00910262859959	0.0026473654005753	Down	0.000654440410638712	NA	NA	NA	K08869//aarF domain-containing kinase	gi|460384295|ref|XP_004237848.1|//PREDICTED: uncharacterized aarF domain-containing protein kinase At1g71810, chloroplastic isoform X1 [Solanum lycopersicum];gi|723694071|ref|XP_010320127.1|//PREDICTED: uncharacterized aarF domain-containing protein kinase At1g71810, chloroplastic isoform X2 [Solanum lycopersicum]
Solyc06g061070.3.1	1693	21862.1825626801	3639.28308265491	-2.58671125537545	8.06008899318638e-10	Down	5.64218246951097e-11	GO:0043234//protein complex	NA	GO:0006546//glycine catabolic process	K02437//glycine cleavage system H protein	gi|460392743|ref|XP_004241973.1|//PREDICTED: glycine cleavage system H protein, mitochondrial [Solanum lycopersicum]
Solyc05g014980.3.1	1193	968.326330687822	2647.80773548594	1.45123313813278	4.48119474029734e-07	Up	4.89410339535978e-08	GO:0044424//intracellular part	GO:0032559//adenyl ribonucleotide binding;GO:0016776//phosphotransferase activity, phosphate group as acceptor;GO:0019205//nucleobase-containing compound kinase activity	GO:0006796//phosphate-containing compound metabolic process;GO:0009117//nucleotide metabolic process	K00939//adenylate kinase [EC:2.7.4.3]	gi|460387035|ref|XP_004239196.1|//PREDICTED: adenylate kinase 4 [Solanum lycopersicum]
Solyc08g005580.3.1	2499	238.540501923768	67.9219813495356	-1.81228379359814	0.000192163553195307	Down	3.60360383228563e-05	NA	GO:0000166//nucleotide binding;GO:0017111//nucleoside-triphosphatase activity	NA	K05681//ATP-binding cassette, subfamily G (WHITE), member 2	gi|723719387|ref|XP_010324495.1|//PREDICTED: ABC transporter G family member 14-like isoform X1 [Solanum lycopersicum];gi|723719390|ref|XP_010324496.1|//PREDICTED: ABC transporter G family member 14-like isoform X2 [Solanum lycopersicum]
Solyc12g044600.3.1	2487	12035.0925648585	3297.45494268256	-1.8678223866293	1.39228945094683e-10	Down	8.57855398246278e-12	GO:0009536//plastid	GO:0043169//cation binding;GO:0000166//nucleotide binding;GO:0004470//malic enzyme activity	GO:0043648//dicarboxylic acid metabolic process	K00029//malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]	gi|914614860|ref|NP_001234458.2|//NADP-dependent malic enzyme, chloroplastic [Solanum lycopersicum]
Solyc03g113130.3.1	1341	5.9693773460944	38.5145961580876	2.68975293832998	0.00100189800380637	Up	0.000222645572002942	NA	NA	NA	K10712//cysteamine dioxygenase [EC:1.13.11.19]	gi|460380910|ref|XP_004236196.1|//PREDICTED: probable 2-aminoethanethiol dioxygenase isoform X1 [Solanum lycopersicum]
Solyc10g077110.1.1	1649	3654.36408686502	1599.9857343125	-1.1915613359407	0.00578828408372412	Down	0.00157997630628864	GO:0005730//nucleolus;GO:0044464//cell part	GO:0046872//metal ion binding;GO:0046914//transition metal ion binding;GO:0080084//5S rDNA binding;GO:0008097//5S rRNA binding;GO:0003700//transcription factor activity, sequence-specific DNA binding	GO:0006355//regulation of transcription, DNA-templated	K09191//general transcription factor IIIA	gi|350535825|ref|NP_001234471.1|//transcription factor IIIA [Solanum lycopersicum]
Solyc02g082280.3.1	4517	771.167620029386	1653.57711708619	1.10047394764999	8.01692296343061e-05	Up	1.36922398309375e-05	NA	NA	NA	K20308//trafficking protein particle complex subunit 11	gi|460373575|ref|XP_004232591.1|//PREDICTED: trafficking protein particle complex subunit 11 isoform X1 [Solanum lycopersicum]
Solyc07g053550.2.1	444	417.685522717474	6812.76233043631	4.02775083325705	1.83027011077648e-13	Up	7.32708401287437e-15	NA	NA	NA	K03676//glutaredoxin 3	gi|723715362|ref|XP_010323755.1|//PREDICTED: glutaredoxin-C9-like [Solanum lycopersicum]
Solyc05g013750.3.1	4007	1143.05273576678	9164.82265435036	3.00321499876751	3.45230741647586e-06	Up	4.48460241032442e-07	NA	GO:0003779//actin binding;GO:0004721//phosphoprotein phosphatase activity;GO:0016301//kinase activity;GO:0008138//protein tyrosine/serine/threonine phosphatase activity;GO:0004725//protein tyrosine phosphatase activity;GO:0016772//transferase activity, transferring phosphorus-containing groups	GO:0016310//phosphorylation;GO:0006464//cellular protein modification process;GO:0035335//peptidyl-tyrosine dephosphorylation;GO:0006796//phosphate-containing compound metabolic process	K14165//atypical dual specificity phosphatase [EC:3.1.3.16 3.1.3.48];K04459//dual specificity MAP kinase phosphatase [EC:3.1.3.16 3.1.3.48];K21278	gi|460386929|ref|XP_004239146.1|//PREDICTED: protein-tyrosine-phosphatase MKP1-like [Solanum lycopersicum]
Solyc05g013620.2.1	1939	692.421474461622	1760.06686745252	1.34590786631343	0.00913005835549847	Up	0.0026367859004921	NA	NA	NA	NA	gi|970029055|ref|XP_015075854.1|//PREDICTED: LOW QUALITY PROTEIN: histidine-rich glycoprotein [Solanum pennellii]
Solyc04g045580.3.1	1345	1435.73066280598	448.206503583541	-1.67954964289794	7.23475227279219e-08	Down	6.89550527863785e-09	NA	NA	NA	K13065//shikimate O-hydroxycinnamoyltransferase [EC:2.3.1.133]	gi|460383718|ref|XP_004237565.1|//PREDICTED: uncharacterized protein LOC101265915 [Solanum lycopersicum]
Solyc12g010800.2.1	1604	77.9549794223295	16.8828243223221	-2.20708490667043	0.0281667239045784	Down	0.00957614017942672	NA	NA	NA	K20557;K04374//cyclic AMP-dependent transcription factor ATF-4	gi|460412825|ref|XP_004251798.1|//PREDICTED: basic leucine zipper 34-like [Solanum lycopersicum]
Solyc03g081230.1.1	642	32.8284485080378	6.7661818285912	-2.27853271637831	0.00901909583112687	Down	0.00260036925055041	NA	NA	NA	NA	gi|460378533|ref|XP_004235025.1|//PREDICTED: protein YLS9 [Solanum lycopersicum]
Solyc10g007050.3.1	1708	2271.74379794275	765.791000677455	-1.56877752885205	1.96794791283164e-06	Down	2.4434301840026e-07	NA	NA	NA	K16054//methylthioribulose 1-phosphate dehydratase / enolase-phosphatase E1 [EC:4.2.1.109 3.1.3.77]	gi|460405593|ref|XP_004248260.1|//PREDICTED: probable bifunctional methylthioribulose-1-phosphate dehydratase/enolase-phosphatase E1 1 [Solanum lycopersicum]
Solyc04g005860.3.1	2085	974.672550391571	3395.23814143491	1.80052324881467	1.71321465377061e-07	Up	1.74080182875305e-08	NA	NA	NA	NA	gi|460382496|ref|XP_004236975.1|//PREDICTED: uncharacterized protein LOC101252276 [Solanum lycopersicum]
Solyc08g081620.3.1	1735	478.085487090432	1196.04142429305	1.32292684084816	0.00072796230095986	Up	0.000156212873364616	NA	GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds	GO:0044238//primary metabolic process;GO:0009827//plant-type cell wall modification	K01179//endoglucanase [EC:3.2.1.4]	gi|350538585|ref|NP_001234862.1|//endo-1,4-beta-glucanase precursor [Solanum lycopersicum]
Solyc06g075370.3.1	1118	143.550171755084	1247.58578599173	3.11951205917285	5.13918498698195e-24	Up	6.35980846756377e-26	NA	NA	NA	K16222//Dof zinc finger protein DOF5.5	gi|460391308|ref|XP_004241265.1|//PREDICTED: dof zinc finger protein DOF2.1 [Solanum lycopersicum]
Solyc09g083390.2.1	4299	1651.15655449069	121.841337262149	-3.76040132958975	1.96140524339916e-19	Down	3.88216111616578e-21	NA	NA	NA	K02958//small subunit ribosomal protein S15e	gi|460404359|ref|XP_004247650.1|//PREDICTED: uncharacterized protein LOC101245795 [Solanum lycopersicum]
Solyc11g067070.1.1	2511	206.007766570081	540.635222586761	1.3919567784775	0.0477784120291622	Up	0.0177432652097265	NA	GO:0016301//kinase activity	NA	K08286//protein-serine/threonine kinase [EC:2.7.11.-]	gi|460411265|ref|XP_004251034.1|//PREDICTED: serine/threonine-protein kinase D6PK-like [Solanum lycopersicum]
Solyc12g087860.2.1	1008	10.7032137617526	41.8377153110738	1.96676002324871	0.0238863755416804	Up	0.00791523315121509	NA	NA	NA	K10664//E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:2.3.2.27]	gi|723752178|ref|XP_004252804.2|//PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Solanum lycopersicum]
Solyc08g066320.3.1	3345	45.7435221328941	247.172695759638	2.43388002400979	1.18172471980099e-05	Up	1.69937899544961e-06	NA	NA	NA	K00924	gi|723722588|ref|XP_010325071.1|//PREDICTED: LRR receptor-like serine/threonine-protein kinase HSL2 [Solanum lycopersicum]
Solyc01g103510.3.1	1507	1161.52083287564	2470.06289132272	1.08853274499436	2.01699967022771e-05	Up	3.05767767213958e-06	GO:0016020//membrane;GO:0030529//intracellular ribonucleoprotein complex;GO:0022625//cytosolic large ribosomal subunit	GO:0005198//structural molecule activity;GO:0003735//structural constituent of ribosome	GO:0010467//gene expression;GO:0006412//translation	K02925//large subunit ribosomal protein L3e	gi|460369196|ref|XP_004230449.1|//PREDICTED: 60S ribosomal protein L3-2 [Solanum lycopersicum]
Solyc02g037550.3.1	1441	493.572817545643	101.410618258163	-2.28305422489001	0.00114028134694314	Down	0.000256848075875108	NA	NA	NA	K07088//uncharacterized protein	gi|460371622|ref|XP_004231634.1|//PREDICTED: uncharacterized protein LOC101264385 [Solanum lycopersicum]
Solyc03g007775.1.1	3067	299.15287291663	75.4942163055444	-1.98644489065153	4.62466320157235e-07	Down	5.0544876364918e-08	NA	NA	NA	NA	gi|460376850|ref|XP_004234209.1|//PREDICTED: probable membrane-associated kinase regulator 6 [Solanum lycopersicum]
Solyc02g080615.1.1	4634	294.876256656075	110.410722205355	-1.41722937981186	0.0262325343173523	Down	0.00882663960350155	NA	NA	NA	K03327//multidrug resistance protein, MATE family	gi|970011689|ref|XP_015066768.1|//PREDICTED: ankyrin repeat domain-containing protein 13C [Solanum pennellii]
Solyc07g008090.3.1	1182	107.735700097971	333.945607416853	1.6321167465284	0.00577720408256378	Up	0.00157652121248134	NA	NA	NA	NA	gi|970042081|ref|XP_015082427.1|//PREDICTED: WD repeat-containing protein 11 isoform X1 [Solanum pennellii]
Solyc10g080260.2.1	3053	1275.38559563978	447.551586268093	-1.51080760557865	5.69068231166318e-08	Down	5.30717427455691e-09	NA	NA	NA	K15172//transcription elongation factor SPT5;K07560//D-tyrosyl-tRNA(Tyr) deacylase [EC:3.1.-.-]	gi|460407665|ref|XP_004249271.1|//PREDICTED: zinc finger CCCH domain-containing protein 24-like [Solanum lycopersicum]
Solyc05g050240.3.1	930	80.2062605393833	22.8968998185209	-1.80856257701246	0.0132459412042778	Down	0.00401456492962513	NA	NA	NA	NA	gi|460388867|ref|XP_004240085.1|//PREDICTED: uncharacterized protein LOC101251987 [Solanum lycopersicum]
Solyc01g067890.3.1	3623	3504.26000219942	985.002239448555	-1.83091091144289	0.00170049495528253	Down	0.000398565389847045	GO:0009536//plastid	GO:0008661//1-deoxy-D-xylulose-5-phosphate synthase activity;GO:0016744//transferase activity, transferring aldehyde or ketonic groups;GO:0016903//oxidoreductase activity, acting on the aldehyde or oxo group of donors	GO:0006721//terpenoid metabolic process;GO:0006772//thiamine metabolic process;GO:0016114//terpenoid biosynthetic process	K01662//1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]	gi|350539507|ref|NP_001234672.1|//1-D-deoxyxylulose 5-phosphate synthase [Solanum lycopersicum];gi|702445336|ref|XP_010024490.1|//PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic [Eucalyptus grandis]
Solyc01g008670.3.1	1806	28.3547680950436	353.589673342202	3.64041287904201	1.57120349743181e-13	Up	6.22554539201587e-15	NA	GO:0005506//iron ion binding;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30];K15472//premnaspirodiene oxygenase [EC:1.14.13.121]	gi|460365235|ref|XP_004228509.1|//PREDICTED: premnaspirodiene oxygenase-like [Solanum lycopersicum]
Solyc06g007460.3.1	758	23.0258509646815	77.429140430263	1.74962215147032	0.0166031049650523	Up	0.00518569162942337	NA	NA	NA	NA	gi|460389572|ref|XP_004240425.1|//PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 6 [Solanum lycopersicum]
Solyc11g013240.2.1	2189	98.476747532065	819.074003292117	3.05613878646082	1.14464669981095e-13	Up	4.44580983003956e-15	NA	NA	NA	K08866//serine/threonine-protein kinase TTK/MPS1 [EC:2.7.12.1]	gi|723742453|ref|XP_010312790.1|//PREDICTED: serine/threonine-protein kinase MPS1 isoform X2 [Solanum lycopersicum]
Solyc02g062000.3.1	2049	1026.80127646976	2223.28028821296	1.11453284540293	0.00854738067889805	Up	0.00244716083922081	NA	GO:0046872//metal ion binding	NA	K00921//1-phosphatidylinositol-3-phosphate 5-kinase [EC:2.7.1.150]	gi|460375545|ref|XP_004233566.1|//PREDICTED: uncharacterized protein LOC101254660 [Solanum lycopersicum]
Solyc06g076320.1.1	366	0.382373044320553	5.59591979795533	3.87132255747612	0.019531278628746	Up	0.00625804648474357	NA	NA	NA	NA	gi|698500552|ref|XP_009796025.1|//PREDICTED: uncharacterized protein LOC104242657 [Nicotiana sylvestris]
Solyc03g116830.3.1	3346	158.267101539548	481.150378941946	1.60412646660877	0.00100199036468611	Up	0.00022271017387145	NA	NA	NA	K03106//signal recognition particle subunit SRP54 [EC:3.6.5.4]	gi|723686471|ref|XP_010318754.1|//PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101255783 [Solanum lycopersicum]
Solyc06g074500.2.1	946	20.4696091033937	57.8984657086803	1.50004156546251	0.014493267765812	Up	0.00444865074940594	NA	NA	NA	K10406//kinesin family member C2/C3	gi|460391399|ref|XP_004241308.1|//PREDICTED: uncharacterized protein LOC101248489 [Solanum lycopersicum]
Solyc02g070980.1.1	848	14932.4050368491	712.10452335745	-4.39021371987351	4.88312906081108e-06	Down	6.51748321016605e-07	GO:0009521//photosystem;GO:0010287//plastoglobule;GO:0009535//chloroplast thylakoid membrane;GO:0009523//photosystem II;GO:0009534//chloroplast thylakoid;GO:0031224//intrinsic component of membrane;GO:0016021//integral component of membrane;GO:0009941//chloroplast envelope;GO:0009522//photosystem I	GO:0043169//cation binding;GO:0031409//pigment binding;GO:0046872//metal ion binding;GO:0046906//tetrapyrrole binding;GO:0016168//chlorophyll binding	GO:0009768//photosynthesis, light harvesting in photosystem I;GO:0006464//cellular protein modification process;GO:0006091//generation of precursor metabolites and energy;GO:0009416//response to light stimulus;GO:0018298//protein-chromophore linkage	K08912//light-harvesting complex II chlorophyll a/b binding protein 1	gi|723675658|ref|XP_010316912.1|//PREDICTED: chlorophyll a-b binding protein 1A, chloroplastic [Solanum lycopersicum]
Solyc01g088630.2.1	1104	30.1325108705569	3.10621819413094	-3.27808981478781	0.00617842832657724	Down	0.00169867628361539	NA	NA	NA	K10663//E3 ubiquitin-protein ligase ATL4 [EC:2.3.2.27]	gi|460370592|ref|XP_004231135.1|//PREDICTED: E3 ubiquitin-protein ligase ATL4 [Solanum lycopersicum]
Solyc06g073830.1.1	555	155.98153751553	4402.26022247767	4.81879724484572	1.15512552573605e-12	Up	5.19263971983628e-14	NA	NA	NA	K13448//calcium-binding protein CML	gi|460391515|ref|XP_004241366.1|//PREDICTED: putative calcium-binding protein CML19 [Solanum lycopersicum]
Solyc05g007880.3.1	1707	527.197777710606	188.647863551304	-1.48264852735645	0.00677697793733328	Down	0.0018869846873371	NA	NA	NA	K16222//Dof zinc finger protein DOF5.5	gi|460386268|ref|XP_004238821.1|//PREDICTED: cyclic dof factor 1 [Solanum lycopersicum]
Solyc12g018990.2.1	1528	346.714352768579	694.614732176735	1.00246544902156	9.58289530157043e-05	Up	1.66739806425118e-05	NA	NA	NA	K01240//uridine nucleosidase [EC:3.2.2.3]	gi|460413201|ref|XP_004251983.1|//PREDICTED: probable uridine nucleosidase 2 [Solanum lycopersicum]
Solyc01g104185.1.1	3022	33.0808160011911	6.2263610223031	-2.40953368581392	0.0204395895477633	Down	0.00660088727604821	NA	NA	NA	K13356//alcohol-forming fatty acyl-CoA reductase [EC:1.2.1.84]	gi|723664024|ref|XP_010314793.1|//PREDICTED: fatty acyl-CoA reductase 3-like [Solanum lycopersicum]
Solyc07g041340.2.1	926	505.648483909996	50.7147317498218	-3.31765801130204	3.95136612136477e-08	Down	3.58492065729903e-09	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|970038766|ref|XP_015080717.1|//PREDICTED: protein ELF4-LIKE 3-like isoform X1 [Solanum pennellii]
Solyc06g050315.1.1	863	1.09649048335328	19.8796397018417	4.18032641400613	0.0127094616391172	Up	0.00382733489572192	NA	NA	NA	K11296//high mobility group protein B3	gi|460390523|ref|XP_004240880.1|//PREDICTED: high mobility group B protein 7 isoform X1 [Solanum lycopersicum]
Solyc06g071560.3.1	1928	600.840665596389	227.599325264719	-1.40048617876502	0.00170583854488973	Down	0.000400072168050028	NA	NA	NA	K04354//serine/threonine-protein phosphatase 2A regulatory subunit B	gi|460391795|ref|XP_004241504.1|//PREDICTED: serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1 [Solanum lycopersicum]
Solyc02g082200.3.1	776	4023.65951958467	1759.01268855123	-1.19374234038985	0.0001797023844226	Down	3.34312882306992e-05	NA	NA	NA	K07390//monothiol glutaredoxin	gi|460373591|ref|XP_004232599.1|//PREDICTED: monothiol glutaredoxin-S7, chloroplastic [Solanum lycopersicum]
Solyc01g067740.3.1	1538	5740.21808552153	52833.2350310755	3.20226829551672	1.16505177472465e-38	Up	3.95183060608107e-41	GO:0044424//intracellular part;GO:0005634//nucleus;GO:0005829//cytosol	GO:0016209//antioxidant activity;GO:0004784//superoxide dismutase activity;GO:0043169//cation binding;GO:0005507//copper ion binding;GO:0008270//zinc ion binding;GO:0003824//catalytic activity	GO:0019430//removal of superoxide radicals;GO:0072593//reactive oxygen species metabolic process;GO:0055114//oxidation-reduction process	K04565//superoxide dismutase, Cu-Zn family [EC:1.15.1.1]	gi|902763183|ref|NP_001234031.2|//superoxide dismutase [Cu-Zn] 1 [Solanum lycopersicum]
Solyc10g007840.3.1	2364	1594.29434268537	329.652321954128	-2.27390085961397	2.31740170577823e-08	Down	2.01092558932896e-09	NA	GO:0016884//carbon-nitrogen ligase activity, with glutamine as amido-N-donor	GO:0010467//gene expression	K02433//aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]	gi|460405481|ref|XP_004248204.1|//PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A, chloroplastic/mitochondrial [Solanum lycopersicum]
Solyc01g008925.1.1	1942	883.806832338792	152.129181993386	-2.53843416119435	3.18450345287457e-11	Down	1.78525912968665e-12	NA	NA	NA	K01256//aminopeptidase N [EC:3.4.11.2];K08956//AFG3 family protein [EC:3.4.24.-]	gi|970004282|ref|XP_015062935.1|//PREDICTED: uncharacterized protein At2g37660, chloroplastic [Solanum pennellii];gi|723655157|ref|XP_004228880.2|//PREDICTED: uncharacterized protein At2g37660, chloroplastic [Solanum lycopersicum]
Solyc05g053740.3.1	2502	135.890114983912	350.694783272572	1.36777545570928	1.30347648409802e-05	Up	1.89292693530859e-06	NA	NA	NA	K04711//dihydroceramidase [EC:3.5.1.-]	gi|460388400|ref|XP_004239855.1|//PREDICTED: alkaline ceramidase 3 [Solanum lycopersicum]
Solyc07g052370.3.1	1686	0.776147820786507	403.631302913626	9.0224909028791	1.48274322419187e-14	Up	5.11786277621021e-16	NA	NA	NA	K07418;K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30];K15472//premnaspirodiene oxygenase [EC:1.14.13.121]	gi|460395804|ref|XP_004243471.1|//PREDICTED: premnaspirodiene oxygenase-like [Solanum lycopersicum]
Solyc07g006620.3.1	3071	1813.34266546536	77.4863856364732	-4.54856491416032	4.42098942944663e-43	Down	1.02169876481918e-45	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|723712410|ref|XP_010323234.1|//PREDICTED: probable receptor-like serine/threonine-protein kinase At5g57670 [Solanum lycopersicum]
Solyc08g068730.1.1	696	164.996291155295	8716.99376309306	5.72332517679368	1.08870272960307e-16	Up	2.88935568613905e-18	NA	GO:0016407//acetyltransferase activity	NA	NA	gi|350538913|ref|NP_001234877.1|//N-hydroxycinnamoyl-CoA:tyramine N-hydroxycinnamoyl transferase THT1-3 [Solanum lycopersicum]
Solyc03g007180.1.1	2268	280.671013639856	93.5448751969136	-1.58514955338698	0.000705789652960285	Down	0.000151007626658418	NA	NA	NA	NA	gi|460376762|ref|XP_004234166.1|//PREDICTED: uncharacterized protein LOC101248359 [Solanum lycopersicum]
Solyc03g077950.2.1	1924	128.966451890311	52.6068478254172	-1.29367331319759	0.0180776315830609	Down	0.00572624545970075	NA	NA	NA	K13506//glycerol-3-phosphate O-acyltransferase 3/4 [EC:2.3.1.15];K11806//WD repeat and SOF domain-containing protein 1	gi|460378663|ref|XP_004235088.1|//PREDICTED: uncharacterized protein At1g04910-like isoform X1 [Solanum lycopersicum];gi|698476173|ref|XP_009785418.1|//PREDICTED: uncharacterized protein At1g04910 isoform X1 [Nicotiana sylvestris]
Solyc01g048590.2.1	234	74.4284836764182	508.344246669212	2.77187906003255	0.0154931063274794	Up	0.00479842777974602	GO:0043234//protein complex;GO:0044425//membrane part;GO:0044446//intracellular organelle part;GO:0009507//chloroplast;GO:0034357//photosynthetic membrane	GO:0009055//electron carrier activity;GO:0046872//metal ion binding	GO:0022900//electron transport chain;GO:0019684//photosynthesis, light reaction	K02703//photosystem II P680 reaction center D1 protein [EC:1.10.3.9]	gi|671726966|gb|AII84534.1|//photosystem II 32 kDa protein (chloroplast) [Jungermannia atrovirens]
Solyc08g065710.2.1	1890	0.356780471543858	4.6156179656348	3.69341526085344	0.0281915096585321	Up	0.00958666850360775	NA	NA	NA	K01369//legumain [EC:3.4.22.34]	gi|970045200|ref|XP_015084024.1|//PREDICTED: vacuolar-processing enzyme-like [Solanum pennellii]
Solyc11g017200.2.1	1426	3417.88872660282	809.563957464224	-2.07788846268289	1.81379293606478e-18	Down	3.92803673719113e-20	NA	NA	NA	K02717//photosystem II oxygen-evolving enhancer protein 2;K09553//stress-induced-phosphoprotein 1	gi|460409899|ref|XP_004250374.1|//PREDICTED: uncharacterized protein LOC101263865 [Solanum lycopersicum]
Solyc01g006730.3.1	2044	34.1167484661249	8.18135733534886	-2.06006803584782	0.00144662668813367	Down	0.000333509246537452	NA	NA	NA	K13412//calcium-dependent protein kinase [EC:2.7.11.1]	gi|460365486|ref|XP_004228632.1|//PREDICTED: calcium-dependent protein kinase 20-like [Solanum lycopersicum]
Solyc02g089630.3.1	1617	14.1357047328508	2014.64297857269	7.15503657625684	1.69220407627744e-27	Up	1.47597940155406e-29	NA	GO:0016645//oxidoreductase activity, acting on the CH-NH group of donors	GO:0006536//glutamate metabolic process;GO:0006560//proline metabolic process	K00318//proline dehydrogenase [EC:1.5.-.-]	gi|460372589|ref|XP_004232111.1|//PREDICTED: proline dehydrogenase 2, mitochondrial-like [Solanum lycopersicum]
Solyc12g009650.2.1	1227	55787.8523373077	672.16443555649	-6.37499299166564	1.07174867818037e-18	Down	2.27708642672883e-20	NA	NA	GO:0010876//lipid localization	K02883//large subunit ribosomal protein L18e;K00430//peroxidase [EC:1.11.1.7];K14709//solute carrier family 39 (zinc transporter), member 1/2/3;K11855//ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12]	gi|991820280|ref|NP_001307023.1|//proline-rich protein precursor [Solanum lycopersicum];gi|970068422|ref|XP_015061336.1|//PREDICTED: 36.4 kDa proline-rich protein [Solanum pennellii]
Solyc07g063320.3.1	4188	26.7852073781166	155.2861065474	2.53542038659301	3.99326929668854e-09	Up	3.10643843081444e-10	NA	NA	NA	K20241//WD repeat-containing protein 44	gi|460397314|ref|XP_004244212.1|//PREDICTED: lanC-like protein GCR2 [Solanum lycopersicum]
Solyc11g044610.1.1	558	139.458475014794	1032.34812803558	2.8880220418758	0.0189648029783543	Up	0.00605038574219974	GO:0009536//plastid	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K05575//NAD(P)H-quinone oxidoreductase subunit 4 [EC:1.6.5.3]	gi|543177598|gb|AGV54820.1|//cell wall-associated hydrolase [Phaseolus vulgaris]
Solyc09g047900.2.1	2900	2504.67465080228	556.203038708379	-2.17093968242997	2.27978951210756e-13	Down	9.24560529734988e-15	NA	GO:0016787//hydrolase activity;GO:0019120//hydrolase activity, acting on acid halide bonds, in C-halide compounds	NA	K03252//translation initiation factor 3 subunit C;K19995//secretory carrier-associated membrane protein	gi|460403005|ref|XP_004246996.1|//PREDICTED: epoxide hydrolase 3 isoform X2 [Solanum lycopersicum];gi|970053644|ref|XP_015088456.1|//PREDICTED: haloalkane dehalogenase isoform X2 [Solanum pennellii];gi|747067639|ref|XP_011080549.1|//PREDICTED: uncharacterized protein LOC105163785 [Sesamum indicum]
Solyc02g093840.3.1	3569	815.211385575551	1793.71395391905	1.13770373397159	0.00190542091463683	Up	0.000453059490624286	NA	NA	NA	NA	gi|460371958|ref|XP_004231801.1|//PREDICTED: F-box protein SKIP14-like [Solanum lycopersicum]
Solyc05g024020.1.1	774	75.0457441091369	32.4350532513405	-1.21021645062062	0.0455834168809501	Down	0.0167749842419848	NA	NA	NA	K03283//heat shock 70kDa protein 1/8;K18885//gibberellin A9 O-methyltransferase [EC:2.1.1.275]	gi|698508688|ref|XP_009799599.1|//PREDICTED: uncharacterized protein LOC104245656 [Nicotiana sylvestris]
Solyc10g080960.1.1	801	103.267108661738	45.3658367232393	-1.18670264528251	0.0361194388968807	Down	0.0127565112400456	NA	NA	NA	K14491//two-component response regulator ARR-B family	gi|460407772|ref|XP_004249324.1|//PREDICTED: transcription factor PCL1-like [Solanum lycopersicum]
Solyc01g111430.2.1	2314	84.0843365146745	635.515651345593	2.91801867504512	2.36621833634979e-08	Up	2.0568142091724e-09	NA	NA	NA	K17710//pentatricopeptide repeat domain-containing protein 1	gi|970003596|ref|XP_015062577.1|//PREDICTED: pentatricopeptide repeat-containing protein At3g03580-like [Solanum pennellii]
Solyc03g093180.1.1	675	294.864993880585	4.50899462102858	-6.03110495789715	6.3088025289271e-17	Down	1.63199230470978e-18	NA	NA	NA	K13352//peroxin-11B	gi|460378810|ref|XP_004235161.1|//PREDICTED: peroxisomal membrane protein 11B [Solanum lycopersicum]
Solyc05g047440.1.1	264	177.138819229732	56.9128434296882	-1.6380542422573	0.000544938504618513	Down	0.000113302034395485	GO:0031224//intrinsic component of membrane;GO:0009941//chloroplast envelope	NA	NA	NA	gi|544163672|ref|YP_008563147.1|//hypothetical chloroplast RF1 (chloroplast) [Solanum lycopersicum]
Solyc01g097770.3.1	3748	8079.92807352031	424.198459224646	-4.2515311645208	6.02810621466165e-34	Down	3.123254673617e-36	GO:0005622//intracellular	GO:0000155//phosphorelay sensor kinase activity;GO:0004674//protein serine/threonine kinase activity;GO:0005524//ATP binding	GO:0023014//signal transduction by protein phosphorylation;GO:0000160//phosphorelay signal transduction system	K20715;K08282//non-specific serine/threonine protein kinase [EC:2.7.11.1]	gi|930697388|ref|NP_001234289.2|//phototropin-2 [Solanum lycopersicum]
Solyc05g006560.1.1	1803	294.343156575873	1306.42326124689	2.15005139308709	2.75480960234793e-06	Up	3.52309219683008e-07	NA	NA	NA	NA	gi|460386098|ref|XP_004238737.1|//PREDICTED: UPF0392 protein RCOM_0530710 [Solanum lycopersicum]
Solyc01g007040.3.1	489	94.8435136322127	2194.78074568827	4.53238390352147	2.10993470483091e-10	Up	1.34328629635127e-11	GO:0043234//protein complex	GO:0019787//ubiquitin-like protein transferase activity	GO:0032446//protein modification by small protein conjugation	K10260//F-box and WD-40 domain protein 7;K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K08332//vacuolar protein 8	gi|723655610|ref|XP_010315681.1|//PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase PUB22-like [Solanum lycopersicum]
Solyc12g005910.2.1	1276	688.832498691472	11090.3425656851	4.00900690906091	4.96292152159208e-19	Up	1.01189729846089e-20	GO:0044464//cell part	NA	NA	K14009//B-cell receptor-associated protein 31	gi|460412267|ref|XP_004251523.1|//PREDICTED: uncharacterized protein LOC101250189 [Solanum lycopersicum]
Solyc02g062670.3.1	1794	159.535388620377	404.618966007995	1.34268746355833	0.000211017870601663	Up	3.99257011769062e-05	NA	NA	NA	K19600//tubby-related protein 1	gi|460375461|ref|XP_004233524.1|//PREDICTED: tubby-like F-box protein 5 [Solanum lycopersicum]
Solyc06g082040.2.1	3282	320.218200093393	35.268536973143	-3.18260167244338	8.50319495808688e-17	Down	2.2345133612089e-18	NA	NA	NA	NA	gi|723711833|ref|XP_010323136.1|//PREDICTED: uncharacterized protein LOC101245266 [Solanum lycopersicum]
Solyc04g079350.1.1	954	330.080344575636	1331.7574900314	2.01244225738436	1.88218446920823e-07	Up	1.9251208377469e-08	NA	NA	NA	NA	gi|460384978|ref|XP_004238183.1|//PREDICTED: uncharacterized protein LOC101262614 [Solanum lycopersicum]
Solyc05g012910.3.1	3345	28.7442512806752	6.01775770839559	-2.25597552641687	0.00565545646301267	Down	0.00153823862422109	NA	NA	NA	K13453;K13457//disease resistance protein RPM1	gi|723698730|ref|XP_010320901.1|//PREDICTED: putative late blight resistance protein homolog R1B-23 isoform X2 [Solanum lycopersicum]
Solyc05g010367.1.1	1985	631.858530065834	256.39656902624	-1.30122462577809	1.92362593494964e-08	Down	1.6498670330696e-09	NA	NA	NA	K06911//uncharacterized protein	gi|460386623|ref|XP_004238997.1|//PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Solanum lycopersicum]
Solyc04g063245.1.1	1462	49.9920738528299	4.40086913155774	-3.5058390003669	1.1379259559137e-06	Down	1.35348208040876e-07	NA	NA	NA	K07418;K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30]	gi|970020957|ref|XP_015071727.1|//PREDICTED: premnaspirodiene oxygenase-like [Solanum pennellii]
Solyc07g054290.1.1	594	6134.4400687419	973.905477482895	-2.65507800223111	4.07978632845256e-12	Down	1.98664592201336e-13	NA	NA	NA	K08902//photosystem II Psb27 protein	gi|970037930|ref|XP_015080300.1|//PREDICTED: photosystem II repair protein PSB27-H1, chloroplastic [Solanum pennellii]
Solyc01g094890.3.1	2818	1990.2040205737	271.921291145377	-2.87165531009688	8.30276541734709e-07	Down	9.55368899781961e-08	NA	NA	NA	K13411;K13447//respiratory burst oxidase [EC:1.6.3.- 1.11.1.-]	gi|723661253|ref|XP_004229896.2|//PREDICTED: ferric reduction oxidase 2 [Solanum lycopersicum]
Solyc05g054210.3.1	1616	885.83809001438	399.707378336204	-1.14809882856789	0.0087438668281751	Down	0.00250993433889132	NA	NA	NA	NA	gi|460388319|ref|XP_004239815.1|//PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 [Solanum lycopersicum]
Solyc00g005840.3.1	1372	4157.02368805263	290.753914925333	-3.83768044647132	1.68122861026398e-31	Down	1.09667141343446e-33	NA	GO:0015036//disulfide oxidoreductase activity	GO:0019725//cellular homeostasis;GO:0018904//ether metabolic process	K03671//thioredoxin 1	gi|460415741|ref|XP_004253215.1|//PREDICTED: thioredoxin-like 2, chloroplastic [Solanum lycopersicum]
Solyc01g097890.2.1	1715	494.062717118732	1117.00846727365	1.17687402535795	0.000142733062325652	Up	2.5909870788949e-05	NA	NA	NA	NA	gi|460368545|ref|XP_004230126.1|//PREDICTED: uncharacterized protein LOC101245401 [Solanum lycopersicum]
Solyc01g081440.3.1	2895	793.210417229245	141.021255496801	-2.4917909946796	2.78490011342335e-13	Down	1.14082496818707e-14	NA	NA	NA	NA	gi|460367346|ref|XP_004229535.1|//PREDICTED: uncharacterized protein LOC101261157 [Solanum lycopersicum]
Solyc10g017600.3.1	3435	881.805787809337	334.527982400213	-1.39833405261796	1.18745053118264e-05	Down	1.70938346184113e-06	NA	NA	NA	K13648//alpha-1,4-galacturonosyltransferase [EC:2.4.1.43]	gi|460406241|ref|XP_004248575.1|//PREDICTED: polygalacturonate 4-alpha-galacturonosyltransferase-like [Solanum lycopersicum]
Solyc06g073190.3.1	1304	642.278514343926	2559.25765656061	1.99445445888922	9.8769661733678e-13	Up	4.39949850051235e-14	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004396//hexokinase activity	GO:0006796//phosphate-containing compound metabolic process;GO:0019321//pentose metabolic process	K00847//fructokinase [EC:2.7.1.4]	gi|350534508|ref|NP_001233888.1|//fructokinase-2 [Solanum lycopersicum]
BGI_novel_G000216	2717	6.66164988606528	42.1077953761827	2.66013590486711	0.00378358900648777	Up	0.000979039618422473	NA	NA	NA	K01537//Ca2+-transporting ATPase [EC:3.6.3.8];K00574//cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79];K01051//pectinesterase [EC:3.1.1.11]	gi|970039744|ref|XP_015081210.1|//PREDICTED: uncharacterized protein LOC107024754 [Solanum pennellii]
Solyc07g064610.3.1	2286	1925.08294201875	5848.76788578903	1.60321212988941	3.17244280751249e-08	Up	2.81674324120126e-09	NA	GO:0046872//metal ion binding;GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process	K13412//calcium-dependent protein kinase [EC:2.7.11.1]	gi|926459545|ref|NP_001234582.2|//calcium-dependent protein kinase CDPK1 [Solanum lycopersicum]
Solyc01g008850.3.1	1669	3941.7093046697	9522.72887076816	1.27255367352274	0.00891435512031817	Up	0.00256518642943404	NA	GO:0004674//protein serine/threonine kinase activity;GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process;GO:0007165//signal transduction;GO:0023052//signaling;GO:0006468//protein phosphorylation	K07198//5'-AMP-activated protein kinase, catalytic alpha subunit [EC:2.7.11.11]	gi|460365205|ref|XP_004228494.1|//PREDICTED: CBL-interacting serine/threonine-protein kinase 3-like [Solanum lycopersicum];gi|697113361|ref|XP_009610559.1|//PREDICTED: CBL-interacting serine/threonine-protein kinase 3-like isoform X2 [Nicotiana tomentosiformis]
Solyc08g013758.1.1	1888	62.0499697135344	8.99880232724339	-2.78562559868265	0.000530896377560927	Down	0.000109927291536863	NA	NA	NA	NA	gi|970045295|ref|XP_015084076.1|//PREDICTED: F-box protein At5g03100-like [Solanum pennellii]
Solyc06g064480.3.1	2986	182.333924699832	85.2631782131723	-1.09658827306821	0.00458462988820758	Down	0.00121331713904405	GO:0016020//membrane;GO:0016021//integral component of membrane	NA	NA	K18789//xylogalacturonan beta-1,3-xylosyltransferase [EC:2.4.2.41]	gi|460392579|ref|XP_004241893.1|//PREDICTED: probable glycosyltransferase At3g07620 [Solanum lycopersicum]
Solyc06g075400.3.1	3359	522.77898729924	2264.83738310646	2.11513440809667	1.13309729449386e-12	Up	5.08094544981407e-14	GO:0000220//vacuolar proton-transporting V-type ATPase, V0 domain;GO:0016021//integral component of membrane;GO:0016469//proton-transporting two-sector ATPase complex	GO:0015077//monovalent inorganic cation transmembrane transporter activity;GO:0015078//hydrogen ion transmembrane transporter activity	GO:0015988//energy coupled proton transmembrane transport, against electrochemical gradient;GO:0015991//ATP hydrolysis coupled proton transport	K02154//V-type H+-transporting ATPase subunit a	gi|697127717|ref|XP_009617904.1|//PREDICTED: V-type proton ATPase subunit a1-like [Nicotiana tomentosiformis];gi|460411763|ref|XP_004251275.1|//PREDICTED: V-type proton ATPase subunit a1 [Solanum lycopersicum];gi|460391302|ref|XP_004241262.1|//PREDICTED: V-type proton ATPase subunit a1-like [Solanum lycopersicum];gi|698499008|ref|XP_009795362.1|//PREDICTED: V-type proton ATPase subunit a1-like [Nicotiana sylvestris]
Solyc12g017910.2.1	2987	2325.1545182639	1050.3119749582	-1.14650867743734	0.0121772668988199	Down	0.00364482828379021	NA	NA	NA	K03549//KUP system potassium uptake protein	gi|723749045|ref|XP_010313988.1|//PREDICTED: potassium transporter 4-like [Solanum lycopersicum];gi|698558003|ref|XP_009771180.1|//PREDICTED: potassium transporter 4-like [Nicotiana sylvestris]
Solyc02g086880.3.1	1397	1545.69608216577	5904.01408316305	1.93343948115899	1.48037193637963e-05	Up	2.18126966770116e-06	GO:0043231//intracellular membrane-bounded organelle	GO:0016620//oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor;GO:0016614//oxidoreductase activity, acting on CH-OH group of donors;GO:0000166//nucleotide binding	GO:0008152//metabolic process	K00122//formate dehydrogenase [EC:1.2.1.2]	gi|350538487|ref|NP_001234857.1|//formate dehydrogenase [Solanum lycopersicum]
Solyc08g062850.2.1	594	127.608847327231	18.6001598397932	-2.77834143269849	0.00276606546543601	Down	0.00068728911557315	GO:0009532//plastid stroma;GO:0009509//chromoplast	GO:0032559//adenyl ribonucleotide binding;GO:0016462//pyrophosphatase activity	NA	NA	gi|108773172|ref|YP_635682.1|//Ycf2 [Solanum tuberosum]
Solyc03g044093.1.1	1696	31.334973015165	4.29973122074258	-2.86545536686394	0.000132929221746799	Down	2.39518360639639e-05	NA	NA	NA	NA	gi|723680705|ref|XP_010317781.1|//PREDICTED: BTB/POZ domain-containing protein NPY4 isoform X2 [Solanum lycopersicum]
Solyc08g066180.3.1	2375	3087.35686731917	978.864704761208	-1.65719087910616	3.75686233790843e-07	Down	4.05821792726205e-08	NA	GO:0003824//catalytic activity	NA	K07042//probable rRNA maturation factor	gi|460399223|ref|XP_004245141.1|//PREDICTED: uncharacterized protein LOC101246947 [Solanum lycopersicum]
Solyc10g008280.3.1	3429	869.314441671713	2206.13020382889	1.34356792300705	0.00104183500996838	Up	0.000232236042944775	NA	NA	NA	K08819//cyclin-dependent kinase 12/13 [EC:2.7.11.22 2.7.11.23]	gi|460405417|ref|XP_004248172.1|//PREDICTED: probable serine/threonine-protein kinase At1g54610 isoform X1 [Solanum lycopersicum]
Solyc02g079410.2.1	1174	449.239871710885	907.889369438509	1.01503053111873	0.0130571703003364	Up	0.00395005196650999	NA	NA	NA	K06674//structural maintenance of chromosome 2;K20165//TBC1 domain family member 2A	gi|460373955|ref|XP_004232777.1|//PREDICTED: uncharacterized protein LOC101247579 [Solanum lycopersicum]
Solyc02g084770.3.1	1405	60.6222172374127	245.570154587397	2.01821670887195	3.74650581442197e-06	Up	4.89190765913231e-07	GO:0031224//intrinsic component of membrane;GO:0019866//organelle inner membrane	NA	GO:0006810//transport	K15115//solute carrier family 25 (mitochondrial folate transporter), member 32	gi|723672406|ref|XP_010316392.1|//PREDICTED: folate transporter 1, chloroplastic isoform X1 [Solanum lycopersicum];gi|460373268|ref|XP_004232443.1|//PREDICTED: folate transporter 1, chloroplastic isoform X2 [Solanum lycopersicum]
Solyc06g066310.3.1	1653	102.181284688623	257.930736920767	1.33585272605613	0.000253148561509188	Up	4.86771033762709e-05	NA	GO:0000166//nucleotide binding;GO:0016740//transferase activity	NA	K00938//phosphomevalonate kinase [EC:2.7.4.2]	gi|460392309|ref|XP_004241759.1|//PREDICTED: probable phosphomevalonate kinase [Solanum lycopersicum]
Solyc09g092490.3.1	1323	223.67054131127	31.5642201709637	-2.82501324445161	4.7544652683988e-05	Down	7.73212016028924e-06	NA	NA	NA	K13692//UDP-glucose:(indol-3-yl)acetate beta-D-glucosyltransferase [EC:2.4.1.121]	gi|723733086|ref|XP_004247896.2|//PREDICTED: crocetin glucosyltransferase, chloroplastic-like [Solanum lycopersicum]
Solyc02g069130.3.1	1014	613.579800926444	115.158814818292	-2.41362614375538	1.01129517009631e-10	Down	6.09913368576049e-12	NA	GO:0016859//cis-trans isomerase activity	GO:0044267//cellular protein metabolic process	K09571//FK506-binding protein 4/5 [EC:5.2.1.8];K14826//FK506-binding nuclear protein [EC:5.2.1.8]	gi|460374857|ref|XP_004233225.1|//PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP17-1, chloroplastic [Solanum lycopersicum]
Solyc02g079280.3.1	1274	22.6331287296198	181.352606079218	3.00228954037853	1.1927788932545e-07	Up	1.17819593973626e-08	NA	NA	NA	K09422//myb proto-oncogene protein, plant	gi|460373979|ref|XP_004232789.1|//PREDICTED: transcription factor MYB39 [Solanum lycopersicum]
Solyc11g072540.2.1	2209	1187.83799320902	412.905279105854	-1.52445531434243	1.57225456418567e-05	Down	2.32603189401108e-06	NA	NA	NA	K11804//WD repeat-containing protein 42A	gi|723746460|ref|XP_010313526.1|//PREDICTED: DDB1- and CUL4-associated factor 8 isoform X1 [Solanum lycopersicum];gi|460411765|ref|XP_004251276.1|//PREDICTED: DDB1- and CUL4-associated factor 8 isoform X2 [Solanum lycopersicum]
Solyc12g099650.2.1	342	14182.0446467773	1439.11384949435	-3.30081290858241	4.28224836992177e-06	Down	5.62336402535948e-07	NA	NA	NA	NA	gi|460415093|ref|XP_004252895.1|//PREDICTED: photosystem II 5 kDa protein, chloroplastic-like [Solanum lycopersicum]
Solyc07g063120.3.1	4031	1571.18814091248	183.089729866497	-3.10123317278099	1.61709642059745e-19	Down	3.17656856140919e-21	NA	NA	NA	K16240//protein suppressor of PHYA-105 1;K10143//E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]	gi|460397354|ref|XP_004244232.1|//PREDICTED: protein SPA1-RELATED 4-like [Solanum lycopersicum]
BGI_novel_G000291	2383	493.318270212361	215.832992917197	-1.19260330239829	0.000548092963135703	Down	0.000114100909464474	NA	NA	NA	NA	NA
Solyc08g068160.2.1	2289	98.8295930472464	24.4254045287406	-2.01656064398425	0.00977189226517384	Down	0.00284902999937741	NA	GO:0016709//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen;GO:0000166//nucleotide binding;GO:0050662//coenzyme binding	GO:0008152//metabolic process	K11816//indole-3-pyruvate monooxygenase [EC:1.14.13.168]	gi|460399451|ref|XP_004245254.1|//PREDICTED: indole-3-pyruvate monooxygenase YUCCA6 [Solanum lycopersicum]
Solyc03g025310.3.1	2084	2526.72213598163	1190.72476748197	-1.08542704257873	0.00188253153571393	Down	0.00044698545856932	NA	NA	NA	K03116//sec-independent protein translocase protein TatA	gi|723679790|ref|XP_010317633.1|//PREDICTED: sec-independent protein translocase protein TATB, chloroplastic isoform X6 [Solanum lycopersicum];gi|723679778|ref|XP_010317629.1|//PREDICTED: sec-independent protein translocase protein TATB, chloroplastic isoform X2 [Solanum lycopersicum]
Solyc02g077910.3.1	1441	157.475855211581	64.0080156296307	-1.29880615804073	0.00486698121830354	Down	0.00129729322693039	GO:0016020//membrane	NA	NA	K15109//solute carrier family 25 (mitochondrial carnitine/acylcarnitine transporter), member 20/29	gi|697137107|ref|XP_009622642.1|//PREDICTED: mitochondrial arginine transporter BAC1 isoform X1 [Nicotiana tomentosiformis];gi|723674793|ref|XP_010316766.1|//PREDICTED: mitochondrial arginine transporter BAC1 isoform X3 [Solanum lycopersicum];gi|723674788|ref|XP_010316765.1|//PREDICTED: mitochondrial arginine transporter BAC1 isoform X1 [Solanum lycopersicum];gi|460374209|ref|XP_004232904.1|//PREDICTED: mitochondrial arginine transporter BAC1 isoform X2 [Solanum lycopersicum]
Solyc04g005040.1.1	1092	317.38691082968	3355.44124644368	3.40218795868431	8.20313266386055e-17	Up	2.14648841882738e-18	NA	NA	NA	K07761//gelatinase A [EC:3.4.24.24]	gi|723690843|ref|XP_004237082.2|//PREDICTED: metalloendoproteinase 1 [Solanum lycopersicum]
Solyc08g080660.1.1	753	1.25649315441052	248.179573895467	7.62583775975579	1.9233087152219e-17	Up	4.72439407831831e-19	NA	NA	GO:0006950//response to stress	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723724450|ref|XP_004245628.2|//PREDICTED: osmotin-like protein OSML15 [Solanum lycopersicum]
Solyc02g072460.1.1	804	61.2469129180372	5.20664297099638	-3.55621174151952	0.000275816722096133	Down	5.34511653451306e-05	GO:0016021//integral component of membrane;GO:0009507//chloroplast	NA	GO:0010196//nonphotochemical quenching	K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1];K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|460374563|ref|XP_004233080.1|//PREDICTED: uncharacterized protein ycf20 [Solanum lycopersicum]
Solyc03g112040.1.1	1503	1.10766519708132	21.5843341675121	4.28439080596015	0.000174563738462107	Up	3.24297626545081e-05	NA	NA	NA	K07408//cytochrome P450, family 1, subfamily A, polypeptide 1 [EC:1.14.14.1]	gi|460381077|ref|XP_004236279.1|//PREDICTED: (+)-menthofuran synthase-like [Solanum lycopersicum]
Solyc07g065850.3.1	1348	328.168045765688	798.452460329806	1.28277174424808	6.05741978658308e-05	Up	1.01288151045966e-05	GO:0031224//intrinsic component of membrane	NA	GO:0006810//transport	NA	gi|565358589|ref|XP_006346109.1|//PREDICTED: protein transport protein SFT2-like [Solanum tuberosum]
Solyc03g120260.3.1	1199	1128.40947319309	17947.2199345396	3.9913977967155	1.59730360887107e-06	Up	1.95405935750517e-07	NA	NA	NA	K17302//coatomer subunit beta'	gi|460379915|ref|XP_004235705.1|//PREDICTED: coatomer subunit beta'-2 [Solanum lycopersicum]
Solyc02g085950.3.1	794	816908.755294626	97073.5393218065	-3.07302494641288	7.78865689663357e-36	Down	3.54188214324324e-38	GO:0009536//plastid	GO:0016831//carboxy-lyase activity;GO:0005488//binding;GO:0016491//oxidoreductase activity	GO:0015977//carbon fixation;GO:0043094//cellular metabolic compound salvage	K01602//ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]	gi|132104|sp|P07180.1|RBS3A_SOLLC//RecName: Full=Ribulose bisphosphate carboxylase small chain 3A/3C, chloroplastic; Short=RuBisCO small subunit 3A/3C; Flags: Precursor
Solyc12g014230.2.1	1453	736.290187898147	2469.82666548439	1.74606341499794	4.25370767915283e-05	Up	6.8606653972321e-06	NA	NA	NA	K00655//1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51];K00434//L-ascorbate peroxidase [EC:1.11.1.11]	gi|460413015|ref|XP_004251891.1|//PREDICTED: uncharacterized protein At3g15000, mitochondrial [Solanum lycopersicum]
Solyc02g079040.3.1	2747	1225.31702342868	4263.03099332458	1.79872448143991	4.27198992492984e-10	Up	2.85669819789926e-11	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460374015|ref|XP_004232807.1|//PREDICTED: uncharacterized protein LOC101255950 [Solanum lycopersicum]
Solyc04g082930.2.1	1300	1814.11084841002	323.028716936025	-2.48952828228021	2.92130339505741e-13	Down	1.20323551943434e-14	GO:0009536//plastid	NA	GO:0006091//generation of precursor metabolites and energy	K14172//light-harvesting complex II chlorophyll a/b binding protein 7	gi|460385561|ref|XP_004238472.1|//PREDICTED: chlorophyll a-b binding protein of LHCII type 1 [Solanum lycopersicum]
Solyc11g064890.2.1	3402	2077.89369513265	6836.14424945989	1.71806099166644	2.35512339211181e-05	Up	3.62468483898526e-06	NA	GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0016301//kinase activity;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process;GO:0006468//protein phosphorylation	K14500//BR-signaling kinase [EC:2.7.11.1]	gi|460410983|ref|XP_004250894.1|//PREDICTED: probable serine/threonine-protein kinase At5g41260 [Solanum lycopersicum]
Solyc04g071510.3.1	2383	176.879724118356	355.911546606764	1.00875005794558	0.0109901819881521	Up	0.00324977031949204	NA	NA	NA	K14432//ABA responsive element binding factor	gi|460384190|ref|XP_004237796.1|//PREDICTED: G-box-binding factor 4 isoform X1 [Solanum lycopersicum]
Solyc06g036640.3.1	1887	1129.83892625213	115.618360546366	-3.28867468620849	1.07995649961283e-43	Down	2.41528962191628e-46	GO:0016021//integral component of membrane	NA	NA	K00717//glycoprotein 6-alpha-L-fucosyltransferase [EC:2.4.1.68]	gi|460390154|ref|XP_004240706.1|//PREDICTED: uncharacterized protein LOC101256001 isoform X1 [Solanum lycopersicum];gi|723705005|ref|XP_010321972.1|//PREDICTED: uncharacterized protein LOC101256001 isoform X2 [Solanum lycopersicum]
Solyc01g107290.3.1	1504	465.500564697417	1069.28645572138	1.19979357155394	0.0041569186389957	Up	0.00108726323579219	NA	GO:0008270//zinc ion binding	NA	K15692//E3 ubiquitin-protein ligase RNF13 [EC:2.3.2.27];K10664//E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:2.3.2.27];K16274//E3 ubiquitin-protein ligase AIP2 [EC:2.3.2.27]	gi|723665052|ref|XP_010315196.1|//PREDICTED: E3 ubiquitin-protein ligase MBR2 [Solanum lycopersicum]
Solyc08g080500.3.1	1757	1285.74334325832	3709.5204892236	1.52863002470106	0.00156816809284586	Up	0.000364744628722163	NA	NA	NA	NA	gi|460400231|ref|XP_004245639.1|//PREDICTED: inactive rhomboid protein 1-like [Solanum lycopersicum]
Solyc02g087040.1.1	1173	86.9494166128455	15.5383785096005	-2.48434038705512	1.74127866393404e-05	Down	2.6005737425962e-06	NA	NA	NA	K19041//E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27]	gi|460372947|ref|XP_004232284.1|//PREDICTED: RING-H2 finger protein ATL46-like [Solanum lycopersicum]
Solyc01g008497.1.1	4939	255.606314137972	1404.76441856173	2.45833282811958	0.000319602840280395	Up	6.28888994274715e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|723655290|ref|XP_010315122.1|//PREDICTED: probable receptor-like protein kinase At1g67000 [Solanum lycopersicum];gi|697102149|ref|XP_009599540.1|//PREDICTED: cysteine-rich receptor-like protein kinase 27 isoform X1 [Nicotiana tomentosiformis]
Solyc01g107010.3.1	2339	147.130024904653	537.568912656155	1.86935802198636	4.82235597127897e-07	Up	5.29905524203459e-08	NA	GO:0003677//DNA binding	GO:0006259//DNA metabolic process	K03511//DNA polymerase kappa [EC:2.7.7.7]	gi|723664956|ref|XP_010315177.1|//PREDICTED: DNA polymerase kappa [Solanum lycopersicum]
Solyc03g112220.1.1	291	606.584519088562	1603.54112227218	1.40248076779535	0.0023455747937769	Up	0.000570510844286739	NA	NA	NA	NA	gi|629082766|gb|KCW49211.1|//hypothetical protein EUGRSUZ_K02790 [Eucalyptus grandis]
Solyc08g021820.3.1	1183	6.92525782353645	110.456145767453	3.99546209918615	3.6492736476545e-11	Up	2.05669515254719e-12	NA	NA	NA	K14484//auxin-responsive protein IAA	gi|525343032|ref|NP_001266091.1|//IAA29 [Solanum lycopersicum]
Solyc02g037540.2.1	3396	2.98755564372601	61.0587270901074	4.3531600246611	8.09148572104847e-07	Up	9.2774005061671e-08	NA	NA	NA	K13459//disease resistance protein RPS2	gi|460371769|ref|XP_004231707.1|//PREDICTED: probable disease resistance protein At4g27220 [Solanum lycopersicum]
Solyc12g005670.2.1	3181	0.405327832401118	7.1075069961722	4.13218246543304	0.0105962485975396	Up	0.00311868118854081	NA	NA	NA	K03549//KUP system potassium uptake protein	gi|934635822|ref|NP_001234372.2|//HAK5 [Solanum lycopersicum]
Solyc07g005540.1.1	2568	511.779877444365	245.941234726791	-1.05720978474616	0.0148462855437306	Down	0.0045737494415884	NA	NA	NA	K13415//protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1]	gi|460393988|ref|XP_004242588.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g24230 [Solanum lycopersicum]
Solyc12g098500.2.1	2000	807.547392734037	195.720970105363	-2.0447485913674	0.000120963161463146	Down	2.15567643862868e-05	GO:0044424//intracellular part	GO:0016802//trialkylsulfonium hydrolase activity	GO:0044237//cellular metabolic process	K01251//adenosylhomocysteinase [EC:3.3.1.1]	gi|460415276|ref|XP_004252985.1|//PREDICTED: adenosylhomocysteinase-like [Solanum lycopersicum]
Solyc02g022890.2.1	2176	639.757077005049	59.7022817460155	-3.42166622582935	1.61101306834394e-10	Down	1.00403080746648e-11	NA	NA	NA	K19706//dihydroceramide fatty acyl 2-hydroxylase [EC:1.14.18.7]	gi|697136041|ref|XP_009622087.1|//PREDICTED: fatty acid 2-hydroxylase 1-like [Nicotiana tomentosiformis];gi|565389139|ref|XP_006360318.1|//PREDICTED: fatty acid 2-hydroxylase 1-like [Solanum tuberosum]
Solyc12g009340.2.1	2028	456.345018270637	1272.69415541085	1.47968887566742	0.00245729023321823	Up	0.000601682553377462	NA	NA	NA	K04424//sterile alpha motif and leucine zipper containing kinase AZK [EC:2.7.11.25];K04427//mitogen-activated protein kinase kinase kinase 7 [EC:2.7.11.25];K17535//serine/threonine-protein kinase TNNI3K [EC:2.7.11.1];K04365//B-Raf proto-oncogene serine/threonine-protein kinase [EC:2.7.11.1]	gi|460412649|ref|XP_004251710.1|//PREDICTED: serine/threonine-protein kinase HT1-like [Solanum lycopersicum]
Solyc05g041200.3.1	1697	2942.23635485564	1196.83093159864	-1.29769377872235	0.00347181400700504	Down	0.000886847375503412	GO:0044424//intracellular part	GO:0016702//oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen;GO:0043169//cation binding	GO:0006558//L-phenylalanine metabolic process;GO:0006570//tyrosine metabolic process	K00457//4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]	gi|460389048|ref|XP_004240171.1|//PREDICTED: 4-hydroxyphenylpyruvate dioxygenase-like [Solanum lycopersicum]
Solyc03g097940.3.1	2876	91.1307540575847	250.537996545887	1.45901950870384	0.00289903556314478	Up	0.000724002470294842	GO:0031224//intrinsic component of membrane	GO:0005267//potassium channel activity	GO:0030001//metal ion transport	K04908//potassium voltage-gated channel Eag-related subfamily H member 5;K08867//WNK lysine deficient protein kinase [EC:2.7.11.1];K06694//26S proteasome non-ATPase regulatory subunit 10	gi|460379061|ref|XP_004235283.1|//PREDICTED: potassium channel SKOR-like [Solanum lycopersicum];gi|698448012|ref|XP_009771768.1|//PREDICTED: potassium channel SKOR-like isoform X1 [Nicotiana sylvestris]
Solyc08g066140.3.1	1134	1890.48674400171	295.212741072035	-2.67893084019702	1.10114063149584e-05	Down	1.57446528344194e-06	NA	NA	NA	K00962//polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]	gi|723722541|ref|XP_010325062.1|//PREDICTED: probable polyribonucleotide nucleotidyltransferase 1, chloroplastic [Solanum lycopersicum]
Solyc11g069790.2.1	2256	21054.4345842646	6271.99111446941	-1.74712871182668	1.95309250793237e-05	Down	2.94914930283064e-06	GO:0044424//intracellular part	GO:0005515//protein binding;GO:0032559//adenyl ribonucleotide binding	GO:0006457//protein folding	K04077//chaperonin GroEL	gi|460411525|ref|XP_004251160.1|//PREDICTED: ruBisCO large subunit-binding protein subunit alpha [Solanum lycopersicum]
Solyc06g069760.3.1	2135	1974.96579458426	475.565773547243	-2.05411087353381	1.45178674820371e-12	Down	6.61821676253594e-14	NA	NA	NA	K16222//Dof zinc finger protein DOF5.5	gi|460391959|ref|XP_004241585.1|//PREDICTED: cyclic dof factor 1 [Solanum lycopersicum]
Solyc12g014355.1.1	3446	176.028223128827	1037.93628477432	2.55983922037479	0.000596096787985046	Up	0.000125560718238538	GO:0016021//integral component of membrane;GO:0005886//plasma membrane	GO:0004674//protein serine/threonine kinase activity;GO:0005524//ATP binding	GO:0006468//protein phosphorylation	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K20718	gi|460413033|ref|XP_004251900.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53430 isoform X1 [Solanum lycopersicum];gi|723748685|ref|XP_010313922.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53430 isoform X2 [Solanum lycopersicum]
Solyc07g054480.2.1	3777	442.760029784036	121.090497017128	-1.87043933938336	0.000218201534710034	Down	4.13662220640836e-05	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial	gi|460396485|ref|XP_004243803.1|//PREDICTED: pentatricopeptide repeat-containing protein At1g73710 [Solanum lycopersicum]
Solyc04g077140.3.1	1859	357.586722808244	108.813648129144	-1.71643364994807	0.0186784550952217	Down	0.00594789182490232	NA	NA	NA	K12662//U4/U6 small nuclear ribonucleoprotein PRP4	gi|460384707|ref|XP_004238051.1|//PREDICTED: uncharacterized protein LOC101246921 [Solanum lycopersicum]
Solyc06g061170.3.1	2717	83.7538731899079	857.30856473849	3.35558674196685	1.62875080698361e-14	Up	5.64610947701936e-16	GO:0031224//intrinsic component of membrane	NA	GO:0051234//establishment of localization	K15109//solute carrier family 25 (mitochondrial carnitine/acylcarnitine transporter), member 20/29	gi|565390933|ref|XP_006361187.1|//PREDICTED: mitochondrial carnitine/acylcarnitine carrier-like protein [Solanum tuberosum]
Solyc03g113580.1.1	654	1.00810782545529	25.3684907007151	4.65331582841126	0.000755328580905524	Up	0.000162901862573407	GO:0005576//extracellular region	GO:0016209//antioxidant activity;GO:0046914//transition metal ion binding;GO:0003824//catalytic activity;GO:0004871//signal transducer activity	GO:0008152//metabolic process	K11426//SET and MYND domain-containing protein	gi|460380851|ref|XP_004236167.1|//PREDICTED: germin-like protein subfamily T member 2 [Solanum lycopersicum]
Solyc04g080850.3.1	5197	8518.07228433874	27751.4725912772	1.70396545023571	8.31241710653179e-12	Up	4.22933105353209e-13	NA	GO:0016787//hydrolase activity	NA	K03671//thioredoxin 1;K12309//beta-galactosidase [EC:3.2.1.23]	gi|460385844|ref|XP_004238611.1|//PREDICTED: beta-galactosidase 5 [Solanum lycopersicum]
Solyc09g074890.1.1	357	4.69296253616374	38.3534255444253	3.03078458958378	6.69401879776212e-06	Up	9.19217431450562e-07	NA	NA	NA	NA	gi|723731400|ref|XP_010326583.1|//PREDICTED: rapid alkalinization factor [Solanum lycopersicum]
Solyc03g117770.3.1	1715	3494.40082130006	7154.75770558512	1.03385781075336	0.0051408961979385	Up	0.00137701207985635	GO:0044464//cell part	NA	NA	K11885//DNA damage-inducible protein 1	gi|723686150|ref|XP_010318692.1|//PREDICTED: probable serine incorporator [Solanum lycopersicum]
Solyc05g008950.3.1	3433	783.163882969169	148.007747496579	-2.40364153795739	0.000258550179579354	Down	4.98153376414821e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460386430|ref|XP_004238901.1|//PREDICTED: probable serine/threonine-protein kinase At1g18390 [Solanum lycopersicum]
Solyc07g025520.3.1	1118	2928.09666558646	585.741836006755	-2.3216263360167	1.51770866640887e-07	Down	1.5257418642108e-08	NA	NA	NA	K13115//coiled-coil domain-containing protein 130	gi|723713849|ref|XP_010323459.1|//PREDICTED: uncharacterized protein LOC101254708 [Solanum lycopersicum]
Solyc06g065490.3.1	1102	2178.02068244889	245.744651983728	-3.14778572854908	2.65291548054917e-27	Down	2.38315428213937e-29	GO:0009523//photosystem II	GO:0046872//metal ion binding	GO:0044237//cellular metabolic process	K07119//uncharacterized protein	gi|460392422|ref|XP_004241815.1|//PREDICTED: psbP domain-containing protein 6, chloroplastic [Solanum lycopersicum]
Solyc04g081420.3.1	3298	619.895341362505	228.334516865153	-1.44087569655487	0.000297211887963448	Down	5.80730847138957e-05	NA	NA	NA	NA	gi|723696053|ref|XP_010320426.1|//PREDICTED: uncharacterized protein LOC101261617 isoform X1 [Solanum lycopersicum];gi|460385324|ref|XP_004238354.1|//PREDICTED: uncharacterized protein LOC101261617 isoform X2 [Solanum lycopersicum]
Solyc12g007030.2.1	1806	527.832741319105	3256.53583715141	2.62518535463897	3.22191699181079e-10	Up	2.11848127834883e-11	NA	GO:0016620//oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	GO:0008152//metabolic process	K12355//coniferyl-aldehyde dehydrogenase [EC:1.2.1.68]	gi|460412424|ref|XP_004251601.1|//PREDICTED: aldehyde dehydrogenase family 2 member C4 [Solanum lycopersicum]
Solyc06g050530.3.1	2012	52.8283969362749	1.5137810639727	-5.12508516178739	2.56773964939464e-05	Down	3.97584259116794e-06	NA	NA	NA	K05909//laccase [EC:1.10.3.2]	gi|460390536|ref|XP_004240885.1|//PREDICTED: laccase-5-like [Solanum lycopersicum]
Solyc11g065940.2.1	2794	430.072948143674	1138.48917761464	1.40446728456584	0.0261963327872994	Up	0.00881250571810709	NA	NA	NA	K12471//epsin	gi|460411099|ref|XP_004250952.1|//PREDICTED: epsin-3 [Solanum lycopersicum]
Solyc03g120440.2.1	2358	708.601837402982	237.499323077908	-1.5770518048953	0.000486143848503886	Down	9.98635287425419e-05	GO:0009941//chloroplast envelope;GO:0009570//chloroplast stroma	GO:0016301//kinase activity;GO:0008887//glycerate kinase activity	GO:0016310//phosphorylation;GO:0009853//photorespiration;GO:0006796//phosphate-containing compound metabolic process	K15918//D-glycerate 3-kinase [EC:2.7.1.31];K06627//cyclin A	gi|723685300|ref|XP_004236406.2|//PREDICTED: cyclin-A2-4-like isoform X2 [Solanum lycopersicum];gi|723685297|ref|XP_010318553.1|//PREDICTED: cyclin-A2-4-like isoform X1 [Solanum lycopersicum];gi|971542908|ref|XP_006343101.2|//PREDICTED: D-glycerate 3-kinase, chloroplastic [Solanum tuberosum]
Solyc09g091070.2.1	1496	1193.33672333158	572.404190330225	-1.05989504656349	0.00180161960792789	Down	0.000425692064061983	GO:0009536//plastid	GO:0016615//malate dehydrogenase activity	GO:0043648//dicarboxylic acid metabolic process;GO:0044238//primary metabolic process	K00026//malate dehydrogenase [EC:1.1.1.37]	gi|460404666|ref|XP_004247802.1|//PREDICTED: malate dehydrogenase, chloroplastic-like [Solanum lycopersicum]
Solyc09g090480.2.1	3426	0.377574089987597	9.77289713646383	4.69395463468266	0.00192208182425222	Up	0.00045737924429798	NA	NA	NA	NA	gi|723733172|ref|XP_004247756.2|//PREDICTED: uncharacterized protein LOC101259883 [Solanum lycopersicum]
Solyc04g008455.1.1	1960	162.28070245762	22.3465491273558	-2.86036748750223	5.11620453462112e-11	Down	2.95198739867535e-12	GO:0016021//integral component of membrane	GO:0015079//potassium ion transmembrane transporter activity	GO:0071805//potassium ion transmembrane transport	K03549//KUP system potassium uptake protein	gi|702419985|ref|XP_010066528.1|//PREDICTED: probable potassium transporter 17 [Eucalyptus grandis];gi|460382350|ref|XP_004236902.1|//PREDICTED: probable potassium transporter 17 [Solanum lycopersicum]
BGI_novel_G000302	839	28.8666967902073	6.86070009518574	-2.07297832194496	0.0148060895863859	Down	0.00455971045783212	NA	NA	NA	K20098//DNA excision repair protein ERCC-6-like 2 [EC:3.6.4.-]	gi|971558281|ref|XP_015166153.1|//PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like [Solanum tuberosum]
Solyc00g217960.1.1	444	57.8810965705972	149.141911378119	1.36552157666847	0.0265708317257996	Up	0.00895928670760338	NA	NA	NA	K19040//E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:2.3.2.27];K19038//E3 ubiquitin-protein ligase ATL41 [EC:2.3.2.27]	gi|723754829|ref|XP_010315048.1|//PREDICTED: RING-H2 finger protein ATL10-like [Solanum lycopersicum]
Solyc11g017360.2.1	832	121.917787461637	25.3575377658252	-2.26542205573485	0.00251645707460244	Down	0.000618421108276946	NA	NA	NA	K08869//aarF domain-containing kinase	gi|723742674|ref|XP_010312831.1|//PREDICTED: uncharacterized protein LOC101265394 [Solanum lycopersicum]
Solyc08g076870.1.1	738	127.844027535859	540.664002506637	2.08034754070225	0.000108897876898229	Up	1.91793077510113e-05	NA	NA	NA	NA	gi|460400760|ref|XP_004245900.1|//PREDICTED: uncharacterized protein LOC101245191 [Solanum lycopersicum]
Solyc01g086960.3.1	567	2174.61788115078	17494.5378440634	3.00807073188911	1.90670321761593e-11	Up	1.02484942589912e-12	NA	GO:0046872//metal ion binding	NA	NA	gi|992319588|ref|NP_001307079.1|//stress-associated protein 1 [Solanum lycopersicum]
Solyc02g091180.1.1	501	51.2191157101743	393.96226217278	2.94330318951094	0.000121945894164668	Up	2.17455329388613e-05	NA	NA	NA	NA	gi|723670004|ref|XP_010316076.1|//PREDICTED: uncharacterized protein LOC104645686 [Solanum lycopersicum]
Solyc03g033610.1.1	3387	145.079740489301	19.779070286998	-2.87479955072597	0.00347029035544326	Down	0.000886082396997405	NA	NA	NA	K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|723680184|ref|XP_004234600.2|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Solanum lycopersicum]
Solyc12g009220.2.1	858	923.14137203312	19843.8004287749	4.42599294036266	1.30522207699555e-31	Up	8.46535863266833e-34	NA	NA	NA	K13464//jasmonate ZIM domain-containing protein	gi|350539041|ref|NP_001234883.1|//jasmonate ZIM-domain protein 1 [Solanum lycopersicum]
Solyc04g082470.2.1	1250	320.56233494478	641.904733781484	1.00175427693847	0.0234137520454884	Up	0.00773331060366307	NA	NA	NA	K11805//WD repeat-containing protein 68	gi|723696296|ref|XP_010320460.1|//PREDICTED: catalase isozyme 3-like [Solanum lycopersicum];gi|460385483|ref|XP_004238433.1|//PREDICTED: WD repeat-containing protein LWD1 [Solanum lycopersicum]
Solyc03g119870.3.1	3589	1871.68055921504	489.60735688092	-1.93463708898605	1.03263303229707e-05	Down	1.47112101142068e-06	NA	NA	NA	K03768//peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]	gi|460379967|ref|XP_004235730.1|//PREDICTED: uncharacterized protein LOC101256960 [Solanum lycopersicum]
Solyc07g062750.3.1	2594	347.643985840161	37.5795883851647	-3.20958946155507	3.54829062676929e-08	Down	3.17954773622833e-09	NA	NA	NA	K18416//3'-5' exoribonuclease 1 [EC:3.1.-.-];K18418//ERI1 exoribonuclease 3 [EC:3.1.-.-]	gi|460397396|ref|XP_004244253.1|//PREDICTED: uncharacterized exonuclease domain-containing protein At3g15140 [Solanum lycopersicum]
Solyc07g066430.3.1	1269	1692.8740691044	699.603656171776	-1.27486492284587	0.00466394414003159	Down	0.00123621987400345	NA	NA	NA	K19788//obg-like ATPase 1	gi|460396858|ref|XP_004243987.1|//PREDICTED: obg-like ATPase 1 [Solanum lycopersicum]
Solyc01g096720.3.1	1612	2.81630707919511	596.918819202115	7.72758628004976	7.77202467799387e-19	Up	1.62520718814468e-20	NA	NA	NA	K17866//diphthamide biosynthesis protein 2;K12818//ATP-dependent RNA helicase DHX8/PRP22 [EC:3.6.4.13]	gi|723661788|ref|XP_004230048.2|//PREDICTED: protein ZINC INDUCED FACILITATOR-LIKE 1-like [Solanum lycopersicum]
Solyc03g114250.3.1	1964	2485.62102667782	321.481451345262	-2.95079894558564	1.19810016443691e-11	Down	6.25220005297326e-13	NA	NA	NA	NA	gi|460380735|ref|XP_004236110.1|//PREDICTED: uncharacterized protein LOC101247419 [Solanum lycopersicum]
Solyc04g016490.3.1	1309	252.854503906674	11.6045923311241	-4.44553972946858	1.05551152647189e-11	Down	5.47663651725388e-13	NA	NA	NA	K12867//pre-mRNA-splicing factor SYF1	gi|723688698|ref|XP_010319156.1|//PREDICTED: probable inactive purple acid phosphatase 16 [Solanum lycopersicum]
Solyc03g116390.3.1	703	5.58030355855432	75.7375305365587	3.76259287279429	8.39246502307787e-09	Up	6.84147942652128e-10	NA	NA	NA	K01835//phosphoglucomutase [EC:5.4.2.2]	gi|353703788|ref|NP_001238798.1|//late embryogenesis abundant protein [Solanum lycopersicum]
Solyc03g114330.3.1	2398	496.043228307067	127.061219052161	-1.96494208571454	3.76929088755225e-06	Down	4.92727864270379e-07	NA	NA	NA	K13343//peroxin-14	gi|460380727|ref|XP_004236106.1|//PREDICTED: peroxisomal membrane protein PEX14 [Solanum lycopersicum]
Solyc01g009180.3.1	2908	1153.71485267942	425.501024561446	-1.43905218670432	3.06100806290926e-06	Down	3.94435100397992e-07	GO:0005829//cytosol;GO:0005576//extracellular region	GO:0008705//methionine synthase activity;GO:0046914//transition metal ion binding;GO:0008270//zinc ion binding;GO:0008172//S-methyltransferase activity;GO:0003871//5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity	GO:0000097//sulfur amino acid biosynthetic process;GO:0050667//homocysteine metabolic process;GO:0006730//one-carbon metabolic process;GO:0032259//methylation;GO:0009086//methionine biosynthetic process	K00549//5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14]	gi|971581309|ref|XP_006364490.2|//PREDICTED: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase-like [Solanum tuberosum];gi|460365154|ref|XP_004228469.1|//PREDICTED: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [Solanum lycopersicum]
Solyc02g088350.3.1	1322	6752.29600581027	2751.97996154567	-1.29490818486953	2.45458651277885e-08	Down	2.13911706682457e-09	NA	NA	NA	NA	gi|460372764|ref|XP_004232195.1|//PREDICTED: uncharacterized protein LOC101245219 [Solanum lycopersicum]
Solyc05g010180.3.1	2157	2568.09754587466	173.392743942041	-3.88858457069991	2.14507046376953e-27	Down	1.91895374722188e-29	NA	GO:0016627//oxidoreductase activity, acting on the CH-CH group of donors	GO:0008152//metabolic process	K09835//prolycopene isomerase [EC:5.2.1.13]	gi|460386601|ref|XP_004238986.1|//PREDICTED: prolycopene isomerase, chloroplastic [Solanum lycopersicum]
Solyc03g005460.3.1	3279	55.838287535875	129.271708163503	1.21107996544764	0.0246896821073066	Up	0.00821905223854133	GO:0009526//plastid envelope	GO:0032559//adenyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity;GO:0046914//transition metal ion binding;GO:0003676//nucleic acid binding	NA	K15505//DNA repair protein RAD5 [EC:3.6.4.-]	gi|723678610|ref|XP_004234234.2|//PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 [Solanum lycopersicum]
Solyc12g042170.2.1	2428	353.325081915431	70.5311098990893	-2.32466451951047	2.74367061048526e-11	Down	1.52314475848671e-12	NA	NA	NA	K12489//Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein	gi|723750661|ref|XP_010314234.1|//PREDICTED: LOW QUALITY PROTEIN: ADP-ribosylation factor GTPase-activating protein AGD3-like [Solanum lycopersicum];gi|970068345|ref|XP_015061300.1|//PREDICTED: ADP-ribosylation factor GTPase-activating protein AGD3-like isoform X1 [Solanum pennellii]
Solyc08g066880.3.1	744	3.11707455912378	21.5165814958648	2.7871843149352	0.00541384421851768	Up	0.00146122133540654	NA	NA	NA	NA	gi|723722784|ref|XP_010325109.1|//PREDICTED: bark storage protein A [Solanum lycopersicum]
Solyc04g074860.4.1	1746	136.564541692327	51.1844608959724	-1.41580514997949	0.000640223257001682	Down	0.00013564294739815	GO:0044464//cell part;GO:0016021//integral component of membrane	GO:0015291//secondary active transmembrane transporter activity;GO:0015238//drug transmembrane transporter activity;GO:0015297//antiporter activity	GO:0015893//drug transport;GO:0006855//drug transmembrane transport	K03327//multidrug resistance protein, MATE family	gi|698485643|ref|XP_009789593.1|//PREDICTED: protein TRANSPARENT TESTA 12-like [Nicotiana sylvestris];gi|460384523|ref|XP_004237960.1|//PREDICTED: protein TRANSPARENT TESTA 12 [Solanum lycopersicum]
Solyc03g115770.3.1	2930	67.7142275063376	1033.13381524503	3.93142432738704	6.7758159700447e-13	Up	2.93985753285076e-14	NA	NA	NA	K12127//pseudo-response regulator 1	gi|460380478|ref|XP_004235983.1|//PREDICTED: two-component response regulator-like APRR1 [Solanum lycopersicum]
Solyc03g096900.3.1	3148	1982.06736228267	275.823971204873	-2.84518624599745	5.96640827169826e-14	Down	2.24173980090646e-15	NA	NA	NA	NA	gi|460379045|ref|XP_004235275.1|//PREDICTED: uncharacterized protein LOC101246032 isoform X1 [Solanum lycopersicum];gi|970018110|ref|XP_015070210.1|//PREDICTED: uncharacterized protein LOC107014696 isoform X1 [Solanum pennellii];gi|723683622|ref|XP_010318273.1|//PREDICTED: uncharacterized protein LOC101246032 isoform X2 [Solanum lycopersicum]
Solyc01g111870.2.1	3007	234.280901520226	79.1757860215677	-1.5651081612421	0.00029324298803386	Down	5.71773546445923e-05	GO:0005634//nucleus;GO:0009506//plasmodesma	GO:0005524//ATP binding;GO:0004674//protein serine/threonine kinase activity	GO:0010044//response to aluminum ion;GO:0032504//multicellular organism reproduction;GO:0007126//meiotic nuclear division;GO:0007004//telomere maintenance via telomerase;GO:0006468//protein phosphorylation;GO:0032204//regulation of telomere maintenance;GO:0006303//double-strand break repair via nonhomologous end joining;GO:0010332//response to gamma radiation	K06640//serine/threonine-protein kinase ATR [EC:2.7.11.1]	gi|969995627|ref|XP_015072597.1|//PREDICTED: serine/threonine-protein kinase ATR [Solanum pennellii];gi|460371254|ref|XP_004231457.1|//PREDICTED: serine/threonine-protein kinase ATR [Solanum lycopersicum]
Solyc06g062990.2.1	2101	307.718024909411	969.652125890033	1.65585830276272	4.90166743523345e-08	Up	4.50858823049256e-09	NA	NA	NA	K07195//exocyst complex component 7	gi|723710084|ref|XP_010322822.1|//PREDICTED: exocyst complex component EXO70A1 [Solanum lycopersicum]
Solyc02g094270.2.1	716	0.408396042495513	12.047224413349	4.88258810276571	0.00108741460036697	Up	0.000243642804637164	GO:0043231//intracellular membrane-bounded organelle	GO:0003677//DNA binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0010467//gene expression	K18835//WRKY transcription factor 2;K13424//WRKY transcription factor 33	gi|460375585|ref|XP_004233585.1|//PREDICTED: probable WRKY transcription factor 45 [Solanum lycopersicum]
Solyc07g005430.3.1	1380	2043.92574648861	4756.37788719305	1.21852055387776	0.00024288237339324	Up	4.64706732752162e-05	NA	NA	NA	K07198//5'-AMP-activated protein kinase, catalytic alpha subunit [EC:2.7.11.11]	gi|460393974|ref|XP_004242581.1|//PREDICTED: CBL-interacting serine/threonine-protein kinase 6-like [Solanum lycopersicum];gi|460393970|ref|XP_004242579.1|//PREDICTED: uncharacterized protein LOC101263916 [Solanum lycopersicum]
Solyc03g025350.3.1	2301	59.8129629229243	1071.76991386302	4.1633932275692	2.66542636965093e-07	Up	2.79180263110151e-08	NA	NA	NA	NA	gi|460377280|ref|XP_004234421.1|//PREDICTED: putative transporter arsB [Solanum lycopersicum]
Solyc03g093200.3.1	1484	280.146346521282	1063.23366494753	1.92420610705166	6.9732299964404e-08	Up	6.6228530009431e-09	NA	NA	NA	K14006//protein transport protein SEC23	gi|460378812|ref|XP_004235162.1|//PREDICTED: cell number regulator 6 [Solanum lycopersicum]
BGI_novel_G000329	1332	60.5760144962536	172.960742236678	1.51362605280747	0.00174214034083854	Up	0.000409819878150888	NA	NA	NA	NA	gi|970045439|ref|XP_015084164.1|//PREDICTED: uncharacterized protein LOC107027531 [Solanum pennellii]
Solyc02g082430.3.1	3266	657.486657333242	1387.15670345998	1.07709725178049	0.02211062616624	Up	0.00723743923493547	GO:0031224//intrinsic component of membrane	NA	GO:0009987//cellular process	K08472//mlo protein	gi|460373559|ref|XP_004232584.1|//PREDICTED: MLO-like protein 8 [Solanum lycopersicum]
Solyc01g096410.3.1	3479	195.721993269121	24.5930607955412	-2.99248267491912	2.62397072948093e-08	Down	2.29553425603539e-09	NA	NA	NA	K00889//1-phosphatidylinositol-4-phosphate 5-kinase [EC:2.7.1.68]	gi|460368342|ref|XP_004230026.1|//PREDICTED: phosphatidylinositol 4-phosphate 5-kinase 6-like [Solanum lycopersicum]
Solyc01g087770.3.1	930	47.0434445157116	8.5825191470278	-2.45452062215503	0.0132230590291263	Down	0.0040061511774541	NA	NA	NA	NA	gi|565357136|ref|XP_006345404.1|//PREDICTED: subtilisin-like protease SBT1.7 [Solanum tuberosum]
Solyc04g007500.1.1	492	248.932194275654	27.2495861533182	-3.19144660083344	4.90170941152838e-21	Down	8.07572521207524e-23	NA	GO:0046872//metal ion binding	NA	K16282//E3 ubiquitin-protein ligase RHA2 [EC:2.3.2.27]	gi|723690338|ref|XP_010319406.1|//PREDICTED: E3 ubiquitin-protein ligase RHA2A [Solanum lycopersicum]
Solyc01g059990.3.1	2553	761.769470685791	6342.74082374985	3.05768001664595	0.000465350964259095	Up	9.51412717668531e-05	GO:0043231//intracellular membrane-bounded organelle;GO:0046658//anchored component of plasma membrane;GO:0005773//vacuole	GO:0008422//beta-glucosidase activity;GO:0042973//glucan endo-1,3-beta-D-glucosidase activity;GO:0030247//polysaccharide binding;GO:0043167//ion binding	GO:0006952//defense response;GO:0006950//response to stress;GO:0044238//primary metabolic process;GO:0005975//carbohydrate metabolic process	K03549//KUP system potassium uptake protein;K19891//glucan endo-1,3-beta-glucosidase 1/2/3 [EC:3.2.1.39]	gi|460376906|ref|XP_004234237.1|//PREDICTED: uncharacterized protein LOC101244554 [Solanum lycopersicum];gi|350537435|ref|NP_001234805.1|//glucan endo-1,3-beta-glucosidase B precursor [Solanum lycopersicum]
Solyc01g065550.3.1	2519	456.949979848757	966.556708856923	1.08081813036328	0.00768304401112108	Up	0.00217409200762841	NA	NA	NA	K15697//RING finger protein 114 [EC:2.3.2.27]	gi|460366828|ref|XP_004229280.1|//PREDICTED: protein DEHYDRATION-INDUCED 19 homolog 4 [Solanum lycopersicum]
Solyc03g115760.3.1	3167	1598.29810415206	4815.99125665825	1.59129625746929	1.53140675567206e-09	Up	1.11539018957179e-10	GO:0044464//cell part	NA	GO:0015031//protein transport	K08493//vesicle transport through interaction with t-SNAREs 1;K12127//pseudo-response regulator 1	gi|460380478|ref|XP_004235983.1|//PREDICTED: two-component response regulator-like APRR1 [Solanum lycopersicum]
Solyc09g011040.1.1	1290	43.9552379593396	7.85570767610381	-2.48422194477237	0.0311293378170954	Down	0.0107592136214299	NA	NA	NA	K00924;K02882//large subunit ribosomal protein L18Ae;K01381//saccharopepsin [EC:3.4.23.25]	gi|460401857|ref|XP_004246432.1|//PREDICTED: aspartic proteinase PCS1 [Solanum lycopersicum]
BGI_novel_G000175	3984	387.961466304491	124.942515901043	-1.63464887989747	2.01825704611496e-10	Down	1.27890151274617e-11	NA	NA	NA	K02328//DNA polymerase delta subunit 2;K11323//histone arginine demethylase JMJD6 [EC:1.14.11.-]	gi|971549301|ref|XP_015163897.1|//PREDICTED: uncharacterized protein LOC107060452 [Solanum tuberosum]
Solyc04g072780.3.1	1004	3769.9348498111	1168.19008568274	-1.69026454582267	2.02512336504181e-05	Down	3.07376708753923e-06	NA	NA	NA	NA	gi|460384369|ref|XP_004237884.1|//PREDICTED: uncharacterized protein LOC101246821 [Solanum lycopersicum]
Solyc03g112340.1.1	1197	447.47918382948	4756.67936606322	3.41006230401026	7.40707469301987e-06	Up	1.02845360188978e-06	NA	NA	NA	K10664//E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:2.3.2.27]	gi|460381031|ref|XP_004236256.1|//PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Solanum lycopersicum]
Solyc12g055810.1.1	1566	27.7827176777654	3.49235955993598	-2.9919137231428	0.0171864049960635	Down	0.0053958956792099	NA	GO:0000166//nucleotide binding	NA	K08900//mitochondrial chaperone BCS1	gi|460414523|ref|XP_004252618.1|//PREDICTED: probable mitochondrial chaperone BCS1-B [Solanum lycopersicum]
Solyc08g081310.3.1	1833	1809.45653853573	278.18524905561	-2.70143862870594	5.68869897905095e-06	Down	7.7035348855271e-07	NA	NA	NA	K19202//histone deacetylase complex subunit SAP30	gi|460400123|ref|XP_004245585.1|//PREDICTED: uncharacterized protein LOC101252312 [Solanum lycopersicum]
BGI_novel_G000497	271	4.24606305215596	51.0356463843638	3.5873075647935	6.05295788737849e-06	Up	8.23967578824595e-07	NA	NA	NA	NA	NA
Solyc01g088100.3.1	3298	3723.91396838862	572.465520360939	-2.70155903614869	8.64007850015914e-10	Down	6.0739481330327e-11	NA	NA	NA	NA	gi|723660096|ref|XP_010324869.1|//PREDICTED: zinc finger CCCH domain-containing protein 53 isoform X4 [Solanum lycopersicum];gi|460367647|ref|XP_004229683.1|//PREDICTED: zinc finger CCCH domain-containing protein 53 isoform X2 [Solanum lycopersicum]
Solyc06g064640.3.1	1812	342.696237282299	119.516211283933	-1.51972403161656	3.22251593656032e-05	Down	5.09298776316376e-06	NA	NA	NA	K13703//abhydrolase domain-containing protein 11	gi|460392545|ref|XP_004241876.1|//PREDICTED: alpha/beta hydrolase domain-containing protein 11 [Solanum lycopersicum]
Solyc04g008290.3.1	2995	1760.19175067757	743.82384543817	-1.24269969724933	0.00370133840896191	Down	0.000955550011204476	NA	NA	NA	K16732//protein regulator of cytokinesis 1	gi|698505791|ref|XP_009798327.1|//PREDICTED: 65-kDa microtubule-associated protein 6-like [Nicotiana sylvestris];gi|460382372|ref|XP_004236913.1|//PREDICTED: 65-kDa microtubule-associated protein 6 [Solanum lycopersicum]
Solyc03g034010.3.1	1148	64.0164390006617	22.9722605965475	-1.47854959447689	0.0442740408922218	Down	0.0162174220906465	NA	NA	NA	NA	gi|460377554|ref|XP_004234556.1|//PREDICTED: U-box domain-containing protein 5-like [Solanum lycopersicum]
Solyc08g079180.3.1	2980	23125.5383568907	479.325187172895	-5.59233838992056	8.35781989904375e-23	Down	1.17448117710582e-24	GO:0009532//plastid stroma;GO:0005576//extracellular region;GO:0009526//plastid envelope	GO:0008135//translation factor activity, RNA binding;GO:0032559//adenyl ribonucleotide binding;GO:0032561//guanyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity	GO:0009657//plastid organization;GO:0007275//multicellular organism development;GO:0006412//translation;GO:0009207//purine ribonucleoside triphosphate catabolic process	K02355//elongation factor G	gi|460400419|ref|XP_004245732.1|//PREDICTED: elongation factor G, chloroplastic [Solanum lycopersicum]
Solyc02g084350.3.1	1931	18.3367165448955	114.762522742895	2.6458443556103	1.17618242771345e-05	Up	1.69068562866512e-06	NA	NA	NA	K12581//CCR4-NOT transcription complex subunit 7/8;K03094//S-phase kinase-associated protein 1;K13126//polyadenylate-binding protein;K05941//glutathione gamma-glutamylcysteinyltransferase [EC:2.3.2.15];K01054//acylglycerol lipase [EC:3.1.1.23]	gi|460373328|ref|XP_004232472.1|//PREDICTED: NAC domain-containing protein 7-like [Solanum lycopersicum]
Solyc05g050820.3.1	1858	92.5857619456532	187.804815701303	1.02037180248238	0.0115907050014011	Up	0.00344679605267548	NA	GO:0046872//metal ion binding;GO:0005524//ATP binding;GO:0031072//heat shock protein binding;GO:0051082//unfolded protein binding	GO:0006457//protein folding;GO:0009408//response to heat	K09503//DnaJ homolog subfamily A member 2	gi|970027437|ref|XP_015075021.1|//PREDICTED: dnaJ protein homolog isoform X1 [Solanum pennellii]
Solyc09g065120.3.1	4295	1787.84353728048	639.628030196421	-1.48291541687945	0.00230797358024967	Down	0.000559701659203235	GO:0044464//cell part;GO:0016021//integral component of membrane	GO:0008320//protein transmembrane transporter activity	GO:0006810//transport;GO:0015031//protein transport	K10752//histone-binding protein RBBP4;K10956//protein transport protein SEC61 subunit alpha	gi|698484993|ref|XP_009789286.1|//PREDICTED: preprotein translocase subunit SCY2, chloroplastic [Nicotiana sylvestris];gi|460403364|ref|XP_004247161.1|//PREDICTED: preprotein translocase subunit SCY2, chloroplastic [Solanum lycopersicum]
Solyc03g082660.3.1	3292	6545.4273486199	17534.2079057821	1.42161296603177	4.57874514240901e-06	Up	6.0724523694242e-07	NA	NA	NA	NA	gi|723682364|ref|XP_010318046.1|//PREDICTED: molybdate-anion transporter [Solanum lycopersicum]
Solyc10g047300.2.1	2454	243.06620829883	748.821527191264	1.62327257018714	8.38829607703621e-09	Up	6.8349542360225e-10	GO:0016021//integral component of membrane;GO:0005739//mitochondrion	GO:0016879//ligase activity, forming carbon-nitrogen bonds;GO:0016787//hydrolase activity;GO:0016884//carbon-nitrogen ligase activity, with glutamine as amido-N-donor	GO:0006626//protein targeting to mitochondrion	K02433//aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7];K19870//sperm-associated antigen 1;K04460//serine/threonine-protein phosphatase 5 [EC:3.1.3.16]	gi|460406700|ref|XP_004248799.1|//PREDICTED: outer envelope protein 64, mitochondrial [Solanum lycopersicum];gi|970054935|ref|XP_015089115.1|//PREDICTED: outer envelope protein 64, mitochondrial [Solanum pennellii]
Solyc09g064430.3.1	2105	1229.69611383179	532.802718995953	-1.20662848661785	0.00688965933277616	Down	0.00192015740387533	NA	GO:0016831//carboxy-lyase activity;GO:0048037//cofactor binding	GO:0019752//carboxylic acid metabolic process	K01592//tyrosine decarboxylase [EC:4.1.1.25]	gi|698531796|ref|XP_009762727.1|//PREDICTED: tyrosine decarboxylase 1-like isoform X2 [Nicotiana sylvestris];gi|723730247|ref|XP_010326342.1|//PREDICTED: tyrosine decarboxylase 1-like [Solanum lycopersicum]
Solyc05g053230.3.1	3629	931.64034558051	2982.99789138909	1.67891793455685	2.04044152278543e-05	Up	3.1016279642619e-06	NA	GO:0004674//protein serine/threonine kinase activity;GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0033554//cellular response to stress;GO:0006464//cellular protein modification process;GO:0006468//protein phosphorylation	K13436//pto-interacting protein 1 [EC:2.7.11.1]	gi|723701828|ref|XP_010321417.1|//PREDICTED: pto-interacting protein 1-like isoform X1 [Solanum lycopersicum]
Solyc04g076640.2.1	2203	20.1258314368519	0.819061470722656	-4.61893284427051	0.000432824092528388	Down	8.78780688833358e-05	NA	GO:0003824//catalytic activity;GO:0005488//binding	NA	K18195//rhamnogalacturonan endolyase [EC:4.2.2.23]	gi|970024416|ref|XP_015073520.1|//PREDICTED: probable rhamnogalacturonate lyase B isoform X1 [Solanum pennellii]
Solyc03g097270.3.1	1293	3141.44007617944	14986.2025688968	2.25413689200306	1.54216784161871e-07	Up	1.55205500684752e-08	NA	GO:0004866//endopeptidase inhibitor activity	GO:0051346//negative regulation of hydrolase activity	K13899//cystatin-C	gi|926459549|ref|NP_001300820.1|//cystatin isoform 2 precursor [Solanum lycopersicum];gi|926459521|ref|NP_001234391.2|//cystatin isoform 1 precursor [Solanum lycopersicum]
Solyc02g087150.3.1	1009	6552.68908754242	1488.8661130526	-2.13787305549544	4.8070484167985e-06	Down	6.40390302729902e-07	NA	NA	NA	K01609//indole-3-glycerol phosphate synthase [EC:4.1.1.48]	gi|460372931|ref|XP_004232276.1|//PREDICTED: uncharacterized protein LOC101245116 [Solanum lycopersicum]
Solyc01g103380.3.1	1064	428.477900402754	899.535228858584	1.0699589870276	0.00340459114169576	Up	0.000867518452535865	NA	GO:0032561//guanyl ribonucleotide binding;GO:0003824//catalytic activity	GO:0006810//transport;GO:0035556//intracellular signal transduction	K07904//Ras-related protein Rab-11A	gi|460369176|ref|XP_004230439.1|//PREDICTED: ras-related protein RABA2a [Solanum lycopersicum]
Solyc07g043420.3.1	1286	56945.8855873555	4848.56885106554	-3.55396073326312	0.00124579048245104	Down	0.000282564301689078	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K18054//2'-deoxymugineic-acid 2'-dioxygenase / mugineic-acid 3-dioxygenase [EC:1.14.11.24 1.14.11.25]	gi|350537251|ref|NP_001233775.1|//2-oxoglutarate-dependent dioxygenase 2 [Solanum lycopersicum]
Solyc02g061790.3.1	527	299.491836801201	121.961120534961	-1.29609536976811	0.0433956584775329	Down	0.0158325892790402	NA	GO:0003712//transcription cofactor activity;GO:0003676//nucleic acid binding	GO:0006351//transcription, DNA-templated	NA	gi|460375562|ref|XP_004233574.1|//PREDICTED: RNA polymerase II transcriptional coactivator KIWI-like [Solanum lycopersicum]
Solyc04g077460.3.1	1673	140.370678389506	450.070784916926	1.68091031239125	4.58363985347584e-06	Up	6.08065239247074e-07	GO:0031224//intrinsic component of membrane	NA	NA	K14207//solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2	gi|460384732|ref|XP_004238063.1|//PREDICTED: sodium-coupled neutral amino acid transporter 5-like [Solanum lycopersicum]
Solyc06g053150.1.1	1539	34.4028024266969	401.860957607047	3.54609842494255	1.31841509977022e-14	Up	4.50152166165768e-16	NA	NA	NA	K08900//mitochondrial chaperone BCS1	gi|723706404|ref|XP_010322229.1|//PREDICTED: uncharacterized protein LOC101262523 [Solanum lycopersicum]
Solyc01g009990.3.1	1436	13307.6888959122	3254.20320906646	-2.03188379655335	7.81015989258889e-05	Down	1.33187272657649e-05	NA	GO:0016853//isomerase activity	NA	K03768//peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]	gi|460365069|ref|XP_004228428.1|//PREDICTED: peptidyl-prolyl cis-trans isomerase CYP20-2, chloroplastic [Solanum lycopersicum]
Solyc12g094690.1.1	561	24.8852136714468	6.33746299028025	-1.97331145229726	0.0175552994926195	Down	0.0055344319287024	NA	NA	NA	K19040//E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:2.3.2.27]	gi|460415544|ref|XP_004253118.1|//PREDICTED: RING-H2 finger protein ATL8-like [Solanum lycopersicum]
Solyc11g017430.2.1	1055	1038.98483667366	207.365947930959	-2.32492368893922	1.75085984724975e-09	Down	1.28762728441321e-10	NA	NA	NA	NA	gi|565369044|ref|XP_006351147.1|//PREDICTED: uncharacterized protein LOC102586721 isoform X1 [Solanum tuberosum];gi|460409919|ref|XP_004250384.1|//PREDICTED: uncharacterized protein LOC101266895 [Solanum lycopersicum]
Solyc09g097900.3.1	751	464.08316720535	163.510818140448	-1.50499728043858	1.74613483636075e-08	Down	1.48852332293016e-09	NA	GO:0032561//guanyl ribonucleotide binding;GO:0003824//catalytic activity	GO:0006810//transport;GO:0035556//intracellular signal transduction	K07904//Ras-related protein Rab-11A	gi|565385901|ref|XP_006358795.1|//PREDICTED: ras-related protein RABA5b-like [Solanum tuberosum]
Solyc01g098690.2.1	3101	64.3703219743164	295.008187435712	2.19628740430128	4.80411591846724e-06	Up	6.39820567194105e-07	NA	NA	NA	K19613//leucine-rich repeat protein SHOC2;K10406//kinesin family member C2/C3	gi|723662501|ref|XP_004231263.2|//PREDICTED: receptor-like protein 12 [Solanum lycopersicum]
Solyc11g005420.2.1	1236	297.208977284016	106.261544410914	-1.48385810727785	0.000701255305515545	Down	0.000149932922038063	NA	NA	NA	NA	gi|723740420|ref|XP_004249870.2|//PREDICTED: enolase-phosphatase E1-like [Solanum lycopersicum]
Solyc06g071320.3.1	985	44.4236326849901	9.46265537014706	-2.23101038378246	0.0206773094696248	Down	0.00669461421101689	NA	NA	NA	NA	gi|460391892|ref|XP_004241552.1|//PREDICTED: uncharacterized protein LOC101245768 [Solanum lycopersicum]
Solyc02g079430.3.1	1451	107.695677465762	41.8116641107032	-1.36498297710185	0.00296841660090413	Down	0.000743321258568434	NA	NA	NA	K12135//zinc finger protein CONSTANS	gi|970006204|ref|XP_015063952.1|//PREDICTED: putative zinc finger protein CONSTANS-LIKE 11 [Solanum pennellii]
Solyc05g025500.3.1	2752	608.253999721024	181.498942725988	-1.74471275777673	1.41437065005768e-05	Down	2.07083938923012e-06	NA	GO:0008422//beta-glucosidase activity;GO:0043167//ion binding	GO:0044238//primary metabolic process	K19893//glucan endo-1,3-beta-glucosidase 5/6 [EC:3.2.1.39]	gi|460387281|ref|XP_004239309.1|//PREDICTED: glucan endo-1,3-beta-glucosidase 6 [Solanum lycopersicum]
Solyc08g077060.3.1	1824	598.124044206696	244.320068683218	-1.29167234137769	0.00665235392459888	Down	0.00184831691344715	NA	NA	NA	K12191//charged multivesicular body protein 2A	gi|460400729|ref|XP_004245885.1|//PREDICTED: protein LOL1 isoform X2 [Solanum lycopersicum];gi|698477079|ref|XP_009785779.1|//PREDICTED: protein LSD1-like, partial [Nicotiana sylvestris];gi|460400727|ref|XP_004245884.1|//PREDICTED: protein LOL1 isoform X1 [Solanum lycopersicum]
Solyc12g096090.2.1	1140	383.572867038783	132.762211925833	-1.53065610022154	0.000128061028659129	Down	2.2979193080552e-05	NA	NA	NA	K07119//uncharacterized protein	gi|460415478|ref|XP_004253085.1|//PREDICTED: cadmium-induced protein AS8 isoform X1 [Solanum lycopersicum];gi|723753569|ref|XP_010314815.1|//PREDICTED: cadmium-induced protein AS8 isoform X2 [Solanum lycopersicum]
Solyc12g044230.2.1	2682	211.6699830646	1532.57238959511	2.85606661957328	2.56479898439068e-11	Up	1.41968335016407e-12	GO:0016021//integral component of membrane	NA	NA	K11996//adenylyltransferase and sulfurtransferase [EC:2.7.7.80]	gi|723750954|ref|XP_010314281.1|//PREDICTED: uncharacterized protein LOC101268364 isoform X1 [Solanum lycopersicum];gi|723750972|ref|XP_010314287.1|//PREDICTED: uncharacterized protein LOC101268364 isoform X2 [Solanum lycopersicum]
Solyc07g006730.3.1	1641	152.846001498377	52.3465781052611	-1.54591167493642	0.00867549667710697	Down	0.00248901513059834	NA	NA	NA	K03327//multidrug resistance protein, MATE family	gi|460394171|ref|XP_004242678.1|//PREDICTED: MATE efflux family protein 6-like isoform X1 [Solanum lycopersicum]
Solyc11g006740.2.1	1854	253.93832358926	101.627846012128	-1.32118238404017	0.042749408061839	Down	0.0155505991231358	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K15747//beta-ring hydroxylase [EC:1.14.-.-];K17600//vacuolar protein sorting-associated protein 54;K08235//xyloglucan:xyloglucosyl transferase [EC:2.4.1.207]	gi|723740790|ref|XP_004249952.2|//PREDICTED: putative F-box protein PP2-B12 isoform X1 [Solanum lycopersicum]
Solyc06g071990.3.1	1447	451.600800173401	2516.03966696472	2.47803471992142	4.08776561026077e-07	Up	4.44613838181784e-08	NA	NA	NA	NA	gi|460391847|ref|XP_004241530.1|//PREDICTED: uncharacterized protein LOC101264018 [Solanum lycopersicum]
Solyc08g078845.1.1	1842	66.3983029473967	14.5380375713341	-2.19131382961815	0.00452643275100853	Down	0.00119605940703368	NA	NA	NA	NA	gi|698498829|ref|XP_009795296.1|//PREDICTED: uncharacterized protein LOC104242026 isoform X2 [Nicotiana sylvestris];gi|698498851|ref|XP_009795304.1|//PREDICTED: uncharacterized protein LOC104242026 isoform X9 [Nicotiana sylvestris]
Solyc05g047460.3.1	4315	556.629106374694	246.705095856688	-1.17392883401969	0.0232712150493145	Down	0.00767929278483603	GO:0043231//intracellular membrane-bounded organelle	GO:0005515//protein binding;GO:0003676//nucleic acid binding	GO:0006351//transcription, DNA-templated;GO:0009755//hormone-mediated signaling pathway	K14486//auxin response factor	gi|723700831|ref|XP_010321285.1|//PREDICTED: auxin response factor 19-1 isoform X1 [Solanum lycopersicum]
Solyc10g084810.2.1	3851	382.105446013423	57.9302135104133	-2.72158293266359	4.06697054821906e-07	Down	4.42048834002041e-08	GO:0016021//integral component of membrane	GO:0008270//zinc ion binding;GO:0019706//protein-cysteine S-palmitoyltransferase activity	NA	K20174//oxysterol-binding protein-related protein 1/2;K20029//palmitoyltransferase ZDHHC3/7/25 [EC:2.3.1.225];K08998//uncharacterized protein	gi|970055823|ref|XP_015089558.1|//PREDICTED: UPF0161 protein At3g09310 [Solanum pennellii];gi|747094110|ref|XP_011094884.1|//PREDICTED: probable protein S-acyltransferase 16 isoform X3 [Sesamum indicum]
Solyc05g050110.3.1	1353	2538.73187987923	293.170629474214	-3.11429555413812	5.40581508758406e-11	Down	3.13330940107098e-12	NA	NA	NA	K12842//U2-associated protein SR140	gi|970029507|ref|XP_015076083.1|//PREDICTED: uncharacterized protein LOC107020299 [Solanum pennellii]
Solyc01g081490.3.1	2493	3534.21160206974	327.274459105737	-3.43281549800434	8.89364291147228e-17	Down	2.34374740510321e-18	NA	NA	NA	K03086//RNA polymerase primary sigma factor	gi|460367362|ref|XP_004229543.1|//PREDICTED: RNA polymerase sigma factor sigB [Solanum lycopersicum]
Solyc03g121890.1.1	1752	279.822157236254	1097.59350856861	1.97176174474003	6.67846625692692e-05	Up	1.12469474238839e-05	NA	NA	NA	K05747//Wiskott-Aldrich syndrome protein	gi|723684877|ref|XP_010318494.1|//PREDICTED: formin-like protein 20 [Solanum lycopersicum]
Solyc03g123670.3.1	1538	69.0883735658201	882.898768226444	3.67573317586628	2.52778656888204e-09	Up	1.90516790005945e-10	NA	GO:0046872//metal ion binding	NA	K16286//E3 ubiquitin-protein ligase EL5 [EC:2.3.2.27]	gi|460379547|ref|XP_004235523.1|//PREDICTED: uncharacterized protein LOC101244939 [Solanum lycopersicum]
Solyc02g092660.3.1	2147	129.802692011353	51.7771939987815	-1.32593161668075	0.00574920095953795	Down	0.00156673655193015	NA	NA	NA	NA	gi|460372168|ref|XP_004231904.1|//PREDICTED: uncharacterized protein LOC101255646 isoform X1 [Solanum lycopersicum];gi|723669441|ref|XP_010316004.1|//PREDICTED: uncharacterized protein LOC101255646 isoform X2 [Solanum lycopersicum]
Solyc01g110660.3.1	496	29.6855431576518	0.682569905621839	-5.44263989248839	0.000244591905343041	Down	4.6861577212734e-05	NA	NA	NA	K14488//SAUR family protein	gi|723666146|ref|XP_010315346.1|//PREDICTED: auxin-induced protein 15A-like [Solanum lycopersicum]
Solyc02g087240.3.1	1969	7957.70322617118	3142.61890298176	-1.34038476534155	9.50069411656731e-05	Down	1.65026221049663e-05	NA	GO:0050136//NADH dehydrogenase (quinone) activity;GO:0000166//nucleotide binding;GO:0010181//FMN binding;GO:0051539//4 iron, 4 sulfur cluster binding;GO:0051287//NAD binding;GO:0051536//iron-sulfur cluster binding;GO:0008137//NADH dehydrogenase (ubiquinone) activity	GO:0008152//metabolic process;GO:0055114//oxidation-reduction process	K03942//NADH dehydrogenase (ubiquinone) flavoprotein 1 [EC:1.6.5.3 1.6.99.3]	gi|568215617|ref|NP_001275120.1|//NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial-like [Solanum tuberosum];gi|460372915|ref|XP_004232268.1|//PREDICTED: NADH dehydrogenase [ubiquinone] flavoprotein 1, mitochondrial [Solanum lycopersicum]
Solyc08g008370.3.1	1559	1727.39516841105	10416.2646775316	2.59216794841564	0.000430568968385339	Up	8.74041524461964e-05	NA	NA	NA	K10450//kelch-like protein 12;K10442//kelch-like protein 1/4/5;K10457//kelch-like protein 20;K10443//kelch-like protein 2/3	gi|460398177|ref|XP_004244639.1|//PREDICTED: B2 protein-like [Solanum lycopersicum]
Solyc02g070940.1.1	963	117576.104597172	2080.83978120537	-5.8202851898818	1.37417255061487e-30	Down	9.7321002168192e-33	GO:0009521//photosystem;GO:0010287//plastoglobule;GO:0009535//chloroplast thylakoid membrane;GO:0009523//photosystem II;GO:0009534//chloroplast thylakoid;GO:0031224//intrinsic component of membrane;GO:0016021//integral component of membrane;GO:0009941//chloroplast envelope;GO:0009522//photosystem I	GO:0043169//cation binding;GO:0031409//pigment binding;GO:0046872//metal ion binding;GO:0046906//tetrapyrrole binding;GO:0016168//chlorophyll binding	GO:0009768//photosynthesis, light harvesting in photosystem I;GO:0006464//cellular protein modification process;GO:0006091//generation of precursor metabolites and energy;GO:0009416//response to light stimulus;GO:0018298//protein-chromophore linkage	K08912//light-harvesting complex II chlorophyll a/b binding protein 1	gi|970007787|ref|XP_015064801.1|//PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like [Solanum pennellii];gi|460374596|ref|XP_004233096.1|//PREDICTED: chlorophyll a-b binding protein 1C, chloroplastic [Solanum lycopersicum]
Solyc01g100590.3.1	1474	1021.18535354638	2314.90755358148	1.18070982923727	0.00180960070707728	Up	0.000427948832814364	NA	NA	NA	NA	gi|460368925|ref|XP_004230315.1|//PREDICTED: uncharacterized protein LOC101251127 [Solanum lycopersicum]
Solyc01g057260.3.1	2219	193.421924374398	23.3470551611604	-3.05043883878391	3.73622380884652e-06	Down	4.87708952533939e-07	NA	NA	NA	K06997//PLP dependent protein;K07393//putative glutathione S-transferase	gi|971574597|ref|XP_006360885.2|//PREDICTED: putative UPF0481 protein At3g02645 [Solanum tuberosum]
Solyc03g020010.1.1	618	26.4168207560891	439.338342270689	4.05580365799237	5.73487023838859e-09	Up	4.58097022546099e-10	NA	GO:0061135//endopeptidase regulator activity	GO:0010466//negative regulation of peptidase activity	NA	gi|999808997|ref|NP_001307321.1|//miraculin precursor [Solanum lycopersicum]
Solyc08g078840.3.1	1086	23.928112484233	4.43212887923223	-2.43263485920695	0.00767612016489829	Down	0.00217139093228765	NA	NA	NA	NA	gi|460400465|ref|XP_004245755.1|//PREDICTED: uncharacterized protein LOC101252313 [Solanum lycopersicum]
Solyc01g073890.3.1	2903	63.350254076009	2802.21823536895	5.46707510076473	2.41199102612386e-16	Up	6.66201487385487e-18	NA	NA	NA	K03283//heat shock 70kDa protein 1/8;K16219//protein N-terminal methyltransferase [EC:2.1.1.244];K20393//PRA1 family protein 3	gi|460366966|ref|XP_004229346.1|//PREDICTED: uncharacterized protein LOC101250152 [Solanum lycopersicum]
Solyc12g099200.2.1	598	906.312422023029	70.5244221316172	-3.68381361396047	4.52451071690565e-13	Down	1.90741822753105e-14	NA	GO:0030234//enzyme regulator activity	NA	K21232	gi|927028821|ref|NP_001234791.2|//tomato invertase inhibitor precursor [Solanum lycopersicum]
Solyc10g006190.3.1	3445	687.020710490723	307.603169642871	-1.15928322089469	0.000126272854685539	Down	2.2634790449633e-05	GO:0000932//cytoplasmic mRNA processing body;GO:0030015//CCR4-NOT core complex	NA	GO:0017148//negative regulation of translation;GO:0006402//mRNA catabolic process	K12606//CCR4-NOT transcription complex subunit 9	gi|723734777|ref|XP_010327177.1|//PREDICTED: cell differentiation protein RCD1 homolog [Solanum lycopersicum]
Solyc05g050850.3.1	2676	345.314375870259	1366.60528671149	1.98461431124373	3.20897947553642e-13	Up	1.33009735231717e-14	GO:0005784//Sec61 translocon complex;GO:0016021//integral component of membrane	NA	GO:0006886//intracellular protein transport	K09481//protein transport protein SEC61 subunit beta	gi|460388808|ref|XP_004240056.1|//PREDICTED: protein transport protein Sec61 subunit beta-like [Solanum lycopersicum]
Solyc04g078550.3.1	1501	1881.70845486545	7609.9320493923	2.01584045226897	8.50159994938529e-05	Up	1.46217897600807e-05	NA	GO:0003677//DNA binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0010467//gene expression	K13425//WRKY transcription factor 22	gi|460384871|ref|XP_004238130.1|//PREDICTED: probable WRKY transcription factor 7 [Solanum lycopersicum]
Solyc01g090740.3.1	1530	235.444057141383	1224.55515153888	2.37880153844145	1.43021577546758e-14	Up	4.92056493498052e-16	NA	NA	NA	NA	gi|565362365|ref|XP_006347918.1|//PREDICTED: uncharacterized protein LOC102585259 [Solanum tuberosum]
Solyc11g012790.2.1	5732	928.286237638643	2098.58882761012	1.17677789493135	0.0470663007278731	Up	0.0174384609078224	NA	NA	NA	K11267//sister chromatid cohesion protein PDS5	gi|460409760|ref|XP_004250306.1|//PREDICTED: SEC14 cytosolic factor [Solanum lycopersicum]
Solyc09g008280.2.1	2769	3707.36628093332	11396.7258523536	1.62015285138644	0.0217850862949705	Up	0.00711092890580949	GO:0044424//intracellular part;GO:0005829//cytosol	GO:0016765//transferase activity, transferring alkyl or aryl (other than methyl) groups;GO:0043169//cation binding;GO:0046872//metal ion binding;GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0004478//methionine adenosyltransferase activity	GO:0006730//one-carbon metabolic process;GO:0044237//cellular metabolic process;GO:0006556//S-adenosylmethionine biosynthetic process	K00789//S-adenosylmethionine synthetase [EC:2.5.1.6]	gi|350536693|ref|NP_001234004.1|//S-adenosylmethionine synthase 3 [Solanum lycopersicum]
Solyc03g120020.3.1	3995	1670.92186863677	19.9359490557711	-6.38912817832209	4.27752291517694e-21	Down	7.01546922125336e-23	GO:0031224//intrinsic component of membrane	GO:0015301//anion:anion antiporter activity	GO:0006811//ion transport	K13855//solute carrier family 4 (anion exchanger), member 2;K13862//solute carrier family 4 (sodium borate transporter), member 11;K06573	gi|723685442|ref|XP_010318581.1|//PREDICTED: boron transporter 4 [Solanum lycopersicum]
Solyc03g097180.3.1	1570	639.755880049575	1999.02834188627	1.64370551914564	0.000138991352570652	Up	2.51632995167606e-05	NA	NA	NA	NA	gi|723683703|ref|XP_010318286.1|//PREDICTED: uncharacterized protein LOC101255376 [Solanum lycopersicum]
Solyc09g074450.1.1	399	653.752506082085	18.5213673674789	-5.14148205502055	2.88566145230181e-20	Down	5.15219858227436e-22	NA	NA	NA	NA	gi|723731551|ref|XP_010326610.1|//PREDICTED: classical arabinogalactan protein 26-like [Solanum lycopersicum]
Solyc08g074480.1.1	396	7151.91705540321	371.556822232032	-4.26667524062962	6.48036077450153e-10	Down	4.45905247865284e-11	GO:0009534//chloroplast thylakoid	GO:0005488//binding	GO:0010876//lipid localization	K02883//large subunit ribosomal protein L18e;K11855//ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12]	gi|460401101|ref|XP_004246067.1|//PREDICTED: 14 kDa proline-rich protein DC2.15-like [Solanum lycopersicum]
Solyc02g083500.3.1	1315	1932.47268282326	418.54078020564	-2.20700791790779	1.44241684704989e-05	Down	2.1194301517335e-06	GO:0009570//chloroplast stroma	NA	NA	K14964//Set1/Ash2 histone methyltransferase complex subunit ASH2;K09872//aquaporin PIP	gi|970004798|ref|XP_015063217.1|//PREDICTED: uncharacterized protein LOC107008620 [Solanum pennellii]
Solyc01g100250.3.1	1804	375.852806577605	156.931515934631	-1.26003266467248	0.00269075561545192	Down	0.000666771407914281	GO:0009707//chloroplast outer membrane;GO:0043190//ATP-binding cassette (ABC) transporter complex;GO:0009706//chloroplast inner membrane	GO:0005548//phospholipid transporter activity;GO:0005543//phospholipid binding	GO:0015914//phospholipid transport	NA	gi|460368865|ref|XP_004230285.1|//PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 1, chloroplastic [Solanum lycopersicum]
Solyc11g010730.2.1	2290	168.835054407764	1074.50833950246	2.66999029982317	1.64843140862716e-09	Up	1.20922655888558e-10	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723741671|ref|XP_010312655.1|//PREDICTED: receptor-like cytosolic serine/threonine-protein kinase RBK1 isoform X2 [Solanum lycopersicum]
Solyc01g095990.3.1	7836	333.636893667847	2049.31669446065	2.61879221441569	9.30117241766555e-13	Up	4.12568778031236e-14	NA	NA	NA	K08770//ubiquitin C;K14544//U3 small nucleolar RNA-associated protein 22	gi|460368259|ref|XP_004229985.1|//PREDICTED: phosphatidylinositol 4-kinase gamma 4-like [Solanum lycopersicum]
Solyc08g079440.1.1	1338	297.296205734163	1197.48294313113	2.01003215048526	0.000359084914836802	Up	7.13940262315306e-05	NA	NA	NA	K08679//UDP-glucuronate 4-epimerase [EC:5.1.3.6]	gi|460400387|ref|XP_004245716.1|//PREDICTED: UDP-glucuronate 4-epimerase 5 [Solanum lycopersicum]
Solyc11g013080.2.1	2289	303.610400697985	134.936968054201	-1.16993556271145	0.00147571936293707	Down	0.000341041451103691	NA	NA	NA	K03217//YidC/Oxa1 family membrane protein insertase	gi|970060131|ref|XP_015056820.1|//PREDICTED: ALBINO3-like protein 2, chloroplastic isoform X1 [Solanum pennellii];gi|723742398|ref|XP_010312779.1|//PREDICTED: ALBINO3-like protein 2, chloroplastic isoform X2 [Solanum lycopersicum];gi|723742403|ref|XP_010312780.1|//PREDICTED: ALBINO3-like protein 2, chloroplastic isoform X3 [Solanum lycopersicum]
Solyc05g007050.3.1	2450	940.374701331207	2562.25432337895	1.44610604916999	3.63408498913256e-06	Up	4.73563483003109e-07	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|723697322|ref|XP_010320662.1|//PREDICTED: probable receptor-like protein kinase At5g15080 isoform X1 [Solanum lycopersicum];gi|53689728|gb|AAU89742.1|//serine/threonine protein kinase-like [Solanum tuberosum];gi|460386161|ref|XP_004238768.1|//PREDICTED: probable receptor-like protein kinase At5g15080 isoform X2 [Solanum lycopersicum]
Solyc03g005780.3.1	1329	15667.569307193	457.251650909084	-5.09864918599294	2.45897464757689e-10	Down	1.57741738798264e-11	GO:0009536//plastid	NA	GO:0006091//generation of precursor metabolites and energy	K08912//light-harvesting complex II chlorophyll a/b binding protein 1	gi|460376914|ref|XP_004234241.1|//PREDICTED: uncharacterized protein LOC101245729 [Solanum lycopersicum]
Solyc05g052600.3.1	1633	34980.6973917963	2939.50493077845	-3.57291394878633	7.22508914238122e-21	Down	1.21673554589446e-22	GO:0044424//intracellular part	GO:0019203//carbohydrate phosphatase activity;GO:0042132//fructose 1,6-bisphosphate 1-phosphatase activity	GO:0005975//carbohydrate metabolic process;GO:0016311//dephosphorylation	K01100//sedoheptulose-bisphosphatase [EC:3.1.3.37]	gi|350538149|ref|NP_001234585.1|//chloroplast sedoheptulose-1,7-bisphosphatase [Solanum lycopersicum]
Solyc10g079210.2.1	3189	37.8526589306529	1.87778092554811	-4.33329398127176	3.78934067803584e-05	Down	6.06085464792448e-06	NA	NA	NA	NA	gi|460407532|ref|XP_004249206.1|//PREDICTED: glycosyltransferase-like At2g41451 [Solanum lycopersicum]
Solyc10g055740.2.1	1711	19.7051785174839	297.711540164904	3.91726842108675	4.2670028641765e-07	Up	4.6506323150634e-08	NA	NA	NA	K19476//vacuolar protein sorting-associated protein IST1;K14209//solute carrier family 36 (proton-coupled amino acid transporter);K15015//solute carrier family 32 (vesicular inhibitory amino acid transporter)	gi|460406373|ref|XP_004248639.1|//PREDICTED: lysine histidine transporter-like 8 [Solanum lycopersicum]
Solyc08g079850.3.1	2229	349.344403948391	128.839361040263	-1.43907661930263	0.0423012691886862	Down	0.0153670854895235	NA	GO:0004175//endopeptidase activity;GO:0005515//protein binding	GO:0044092//negative regulation of molecular function;GO:0019538//protein metabolic process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13199//plasminogen activator inhibitor 1 RNA-binding protein;K01183//chitinase [EC:3.2.1.14]	gi|460400314|ref|XP_004245680.1|//PREDICTED: subtilisin-like protease [Solanum lycopersicum]
Solyc06g076050.3.1	2116	445.09076894257	2496.05217694281	2.48747660718158	4.12563248139054e-09	Up	3.21555744691651e-10	NA	NA	NA	K19044//E3 ubiquitin-protein ligase XBAT32/33 [EC:2.3.2.27]	gi|525314108|ref|NP_001265951.1|//Hop-interacting protein THI033 [Solanum lycopersicum]
Solyc01g108190.3.1	558	343.94946914262	822.873965023792	1.258474849122	0.0040720614544935	Up	0.00106203272689321	NA	GO:0046872//metal ion binding	NA	K13448//calcium-binding protein CML	gi|723665410|ref|XP_010315235.1|//PREDICTED: calmodulin-like protein 1 [Solanum lycopersicum]
Solyc12g088940.2.1	3701	197.114211298882	3295.45287860882	4.06337304275713	6.19239542668322e-10	Up	4.24875930276434e-11	NA	NA	NA	K11229//mitogen-activated protein kinase kinase kinase [EC:2.7.11.1];K04421//mitogen-activated protein kinase kinase kinase 3 [EC:2.7.11.25]	gi|460414964|ref|XP_004252831.1|//PREDICTED: mitogen-activated protein kinase kinase kinase YODA-like isoform X1 [Solanum lycopersicum]
Solyc04g054520.3.1	1037	2666.42610552403	556.978704952353	-2.25921327230688	5.21480714802733e-13	Down	2.21838813201865e-14	NA	GO:0016859//cis-trans isomerase activity	GO:0044267//cellular protein metabolic process	K01802//peptidylprolyl isomerase [EC:5.2.1.8]	gi|460383416|ref|XP_004237421.1|//PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP16-2, chloroplastic [Solanum lycopersicum]
Solyc06g083660.3.1	4399	1861.30270289388	448.954885172217	-2.05167031635702	9.42001408569664e-08	Down	9.13981536643371e-09	NA	NA	NA	K09338//homeobox-leucine zipper protein	gi|723711354|ref|XP_010323076.1|//PREDICTED: uncharacterized protein LOC101266733 isoform X4 [Solanum lycopersicum]
Solyc12g009050.2.1	2375	29.0938619822099	236.015750153328	3.02009641814161	8.71261628933797e-19	Up	1.83813210815763e-20	GO:0016602//CCAAT-binding factor complex	GO:0003677//DNA binding;GO:0003700//transcription factor activity, sequence-specific DNA binding	GO:0006355//regulation of transcription, DNA-templated	K08064//nuclear transcription factor Y, alpha	gi|460412591|ref|XP_004251681.1|//PREDICTED: nuclear transcription factor Y subunit A-7-like isoform X1 [Solanum lycopersicum]
Solyc10g079490.2.1	1621	232.452769511684	71.70935494488	-1.69670436952808	6.06697847376768e-07	Down	6.78882860379104e-08	NA	NA	NA	K20891;K00771//protein xylosyltransferase [EC:2.4.2.26]	gi|460407576|ref|XP_004249228.1|//PREDICTED: xylosyltransferase 2 [Solanum lycopersicum]
Solyc07g056060.3.1	1225	422.064121699376	1035.07696282046	1.29420394204745	0.000521195152481853	Up	0.000107801994226994	NA	NA	NA	K17411//small subunit ribosomal protein S33	gi|565402607|ref|XP_006366765.1|//PREDICTED: uncharacterized protein LOC102603713 [Solanum tuberosum];gi|460396427|ref|XP_004243775.1|//PREDICTED: uncharacterized protein LOC101249938 [Solanum lycopersicum];gi|723714667|ref|XP_010323634.1|//PREDICTED: 28S ribosomal protein S33, mitochondrial-like [Solanum lycopersicum];gi|697187299|ref|XP_009602687.1|//PREDICTED: uncharacterized protein LOC104097776 [Nicotiana tomentosiformis]
Solyc03g111090.3.1	9123	1245.10935694486	3441.90259844122	1.46693381288876	4.51874398672004e-06	Up	5.98229711601319e-07	NA	NA	NA	K11721//bromodomain-containing protein 3;K11724//bromodomain testis-specific protein;K05356//all-trans-nonaprenyl-diphosphate synthase [EC:2.5.1.84 2.5.1.85]	gi|723688267|ref|XP_010319067.1|//PREDICTED: transcription factor GTE10 [Solanum lycopersicum]
Solyc02g082930.3.1	777	1253.14364260785	3720.86226422387	1.5700851927411	0.0447613780449465	Up	0.0164276326312265	GO:0044421//extracellular region part	GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds	GO:0006950//response to stress;GO:0006026//aminoglycan catabolic process	K20547	gi|350534512|ref|NP_001234400.1|//acidic 27 kDa endochitinase precursor [Solanum lycopersicum]
Solyc01g109560.3.1	1923	1039.63837767794	3577.1655471488	1.78273508996372	2.13366315852636e-06	Up	2.66429535599496e-07	GO:0043231//intracellular membrane-bounded organelle;GO:0031090//organelle membrane	GO:0060089//molecular transducer activity;GO:0005488//binding	GO:0023052//signaling	K04536//guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1	gi|460370130|ref|XP_004230907.1|//PREDICTED: guanine nucleotide-binding protein subunit beta [Solanum lycopersicum]
Solyc02g069510.1.1	546	135.186252842959	34.9028145937926	-1.95353316426451	0.000290752211912521	Down	5.66266701670987e-05	NA	NA	NA	NA	gi|460374794|ref|XP_004233194.1|//PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4-like [Solanum lycopersicum]
Solyc04g072400.3.1	3254	1967.884626647	839.348941369658	-1.22930303058678	0.000160378012459958	Down	2.95373400762134e-05	NA	NA	NA	K20304//trafficking protein particle complex subunit 6	gi|460384320|ref|XP_004237860.1|//PREDICTED: uncharacterized protein At4g37920, chloroplastic [Solanum lycopersicum]
Solyc03g059360.1.1	2561	246.00585918241	103.097334099628	-1.2546856491515	0.0030913604458195	Down	0.000779177699963897	GO:0016020//membrane	GO:0016787//hydrolase activity;GO:0000166//nucleotide binding	GO:0006816//calcium ion transport	K01537//Ca2+-transporting ATPase [EC:3.6.3.8]	gi|970058788|ref|XP_015056106.1|//PREDICTED: putative calcium-transporting ATPase 11, plasma membrane-type [Solanum pennellii]
Solyc02g070845.1.1	2674	33.7098609849536	6.43384599651317	-2.38941736934242	0.00239999018838831	Down	0.000585684201706362	NA	NA	NA	NA	gi|723675691|ref|XP_010316918.1|//PREDICTED: F-box protein At1g52490-like [Solanum lycopersicum]
Solyc04g080380.3.1	1279	1265.25489841133	58.1388531172929	-4.44378163723296	7.06970640918382e-19	Down	1.47043990469829e-20	NA	GO:0016741//transferase activity, transferring one-carbon groups	GO:0006730//one-carbon metabolic process	K12589//exosome complex component RRP42	gi|460385137|ref|XP_004238261.1|//PREDICTED: uncharacterized protein LOC101260430 [Solanum lycopersicum]
Solyc01g094360.3.1	2912	15.4081738642621	51.7623220000991	1.74820644886482	0.0238863755416804	Up	0.00791523328483446	NA	NA	NA	K09422//myb proto-oncogene protein, plant	gi|460368168|ref|XP_004229941.1|//PREDICTED: myb-related protein Zm38-like [Solanum lycopersicum]
Solyc06g084140.3.1	5795	850.442583984755	80.7844084581433	-3.39606505624554	4.2622075695807e-07	Down	4.64381717827806e-08	GO:0016020//membrane	GO:0005215//transporter activity	GO:0006810//transport	K17471//sulfate transporter 3	gi|460393496|ref|XP_004242345.1|//PREDICTED: sulfate transporter 3.1-like [Solanum lycopersicum];gi|698583885|ref|XP_009778206.1|//PREDICTED: sulfate transporter 3.1-like [Nicotiana sylvestris]
Solyc01g095200.3.1	1511	1735.63670091864	3514.34443798344	1.01779059751175	0.0103461099773075	Up	0.00303503375284813	NA	NA	NA	K20721	gi|460368156|ref|XP_004229935.1|//PREDICTED: reticulon-like protein B1 [Solanum lycopersicum]
Solyc12g044280.2.1	1541	10929.5730395595	1161.56880488341	-3.23409052463801	3.24955079461923e-09	Down	2.48670336266336e-10	GO:0009522//photosystem I	NA	GO:0044237//cellular metabolic process	K02695//photosystem I subunit VI	gi|460413969|ref|XP_004252347.1|//PREDICTED: photosystem I reaction center subunit VI, chloroplastic-like [Solanum lycopersicum]
Solyc10g086270.2.1	835	72.2490246951833	6.5328076642329	-3.46720304215369	3.14707944055871e-06	Down	4.0634721865571e-07	GO:0043231//intracellular membrane-bounded organelle	GO:0003676//nucleic acid binding	NA	K09422//myb proto-oncogene protein, plant	gi|460408471|ref|XP_004249668.1|//PREDICTED: transcription factor MYB113-like [Solanum lycopersicum]
Solyc08g066790.3.1	3003	170.773956621625	1022.96294942464	2.58259401033144	8.5353228100539e-05	Up	1.46921577220922e-05	GO:0016020//membrane;GO:0044464//cell part	GO:0004620//phospholipase activity;GO:0004630//phospholipase D activity;GO:0046872//metal ion binding;GO:0005509//calcium ion binding;GO:0070290//N-acylphosphatidylethanolamine-specific phospholipase D activity	GO:0006650//glycerophospholipid metabolic process;GO:0016042//lipid catabolic process;GO:0046470//phosphatidylcholine metabolic process	K01115//phospholipase D1/2 [EC:3.1.4.4]	gi|807045817|ref|NP_001234863.2|//phospholipase PLDa2 [Solanum lycopersicum];gi|565404143|ref|XP_006367508.1|//PREDICTED: phospholipase D alpha 1-like [Solanum tuberosum]
Solyc10g012050.3.1	2422	640.143392770663	93.9019030256793	-2.76916880537343	6.57370504048855e-09	Down	5.2804287916553e-10	NA	NA	NA	K16052//MscS family membrane protein	gi|723733641|ref|XP_010326981.1|//PREDICTED: mechanosensitive ion channel protein 1, mitochondrial isoform X1 [Solanum lycopersicum]
Solyc09g074640.3.1	1863	619.533075881058	297.210202630312	-1.05969766605064	8.62272509290233e-05	Down	1.48522486410846e-05	NA	GO:0046872//metal ion binding	NA	K03260//translation initiation factor 4G	gi|565387255|ref|XP_006359417.1|//PREDICTED: zinc finger CCCH domain-containing protein 32-like isoform X1 [Solanum tuberosum];gi|565387261|ref|XP_006359420.1|//PREDICTED: zinc finger CCCH domain-containing protein 32-like isoform X2 [Solanum tuberosum];gi|723731494|ref|XP_004247451.2|//PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 32 [Solanum lycopersicum]
Solyc01g107170.2.1	1299	294.812096026066	7006.27005448609	4.57077897346195	3.73956502131399e-14	Up	1.37299520873501e-15	NA	NA	NA	NA	gi|525314008|ref|NP_001266186.1|//ZF2 protein [Solanum lycopersicum]
Solyc11g007890.2.1	1411	2.54639675953856	264.315314920263	6.69765898344526	1.7820202191194e-23	Up	2.33147866747767e-25	NA	NA	NA	K06892//feruloyl-CoA ortho-hydroxylase [EC:1.14.11.-]	gi|460409188|ref|XP_004250021.1|//PREDICTED: probable 2-oxoglutarate/Fe(II)-dependent dioxygenase [Solanum lycopersicum]
Solyc04g070985.1.1	3241	75.2996390393398	14.0683928450803	-2.42018542274758	0.00723563780890215	Down	0.0020338431756721	NA	GO:0031559//oxidosqualene cyclase activity;GO:0016866//intramolecular transferase activity	NA	K01853//cycloartenol synthase [EC:5.4.99.8]	gi|698535343|ref|XP_009764154.1|//PREDICTED: cycloartenol Synthase-like [Nicotiana sylvestris];gi|970024533|ref|XP_015073579.1|//PREDICTED: cycloartenol Synthase-like [Solanum pennellii]
Solyc05g050920.3.1	2013	123.348332155378	1505.32740786583	3.6092671928784	1.73245609273988e-18	Up	3.73897449566272e-20	NA	NA	NA	K00485//dimethylaniline monooxygenase (N-oxide forming) [EC:1.14.13.8];K11816//indole-3-pyruvate monooxygenase [EC:1.14.13.168]	gi|723702410|ref|XP_010321492.1|//PREDICTED: flavin-containing monooxygenase FMO GS-OX-like 2 [Solanum lycopersicum];gi|460388802|ref|XP_004240053.1|//PREDICTED: flavin-containing monooxygenase FMO GS-OX5-like [Solanum lycopersicum]
Solyc07g053980.3.1	6213	1024.85177268554	4155.54172037898	2.01962129674731	3.34374399207659e-06	Up	4.34108406306947e-07	GO:0043234//protein complex;GO:0044464//cell part;GO:0016021//integral component of membrane;GO:0000148//1,3-beta-D-glucan synthase complex	GO:0003843//1,3-beta-D-glucan synthase activity;GO:0035251//UDP-glucosyltransferase activity	GO:0006075//(1->3)-beta-D-glucan biosynthetic process;GO:0006074//(1->3)-beta-D-glucan metabolic process	K11000//callose synthase [EC:2.4.1.-]	gi|460395564|ref|XP_004243352.1|//PREDICTED: callose synthase 12 [Solanum lycopersicum];gi|661881624|emb|CDP14784.1|//unnamed protein product [Coffea canephora]
Solyc02g080500.3.1	2208	737.25914977268	121.119707980039	-2.60573818990153	1.12410161410813e-07	Down	1.10533027360118e-08	NA	NA	NA	NA	gi|460373826|ref|XP_004232714.1|//PREDICTED: uncharacterized GPI-anchored protein At1g61900 [Solanum lycopersicum]
Solyc02g083670.3.1	4683	362.047844900283	159.517362222123	-1.18246690451096	0.00244389385734314	Down	0.000597491419796991	NA	NA	NA	K14489//arabidopsis histidine kinase 2/3/4 (cytokinin receptor) [EC:2.7.13.3]	gi|723672780|ref|XP_010316431.1|//PREDICTED: histidine kinase 1 isoform X1 [Solanum lycopersicum]
Solyc12g017430.2.1	2274	84.3848757350461	28.9565323087085	-1.54309560575777	0.00228947723390117	Down	0.000554704115862443	NA	NA	NA	K20044//phosphatidylinositol-binding clathrin assembly protein	gi|970067904|ref|XP_015061068.1|//PREDICTED: putative clathrin assembly protein At5g57200 [Solanum pennellii]
Solyc01g104880.3.1	5601	464.827777452656	1498.01242175083	1.68828139704393	1.80821491143068e-06	Up	2.23297152287529e-07	NA	NA	NA	K20043//clathrin coat assembly protein AP180;K01613//phosphatidylserine decarboxylase [EC:4.1.1.65]	gi|460369424|ref|XP_004230562.1|//PREDICTED: putative clathrin assembly protein At1g03050 [Solanum lycopersicum];gi|723664325|ref|XP_010315080.1|//PREDICTED: phosphatidylserine decarboxylase proenzyme 2 isoform X1 [Solanum lycopersicum]
Solyc07g052460.3.1	960	0.395473198976688	13.4419495947855	5.08701866152936	0.000490189724860127	Up	0.00010078234689956	NA	NA	NA	NA	gi|460395788|ref|XP_004243463.1|//PREDICTED: probable serine/threonine-protein kinase DDB_G0276461 [Solanum lycopersicum]
Solyc01g101140.3.1	3173	1829.75285997545	4895.87219583973	1.41991709717944	9.65548461376096e-05	Up	1.68038831301811e-05	NA	NA	NA	K17573//meiosis arrest female protein 1	gi|723663387|ref|XP_010313877.1|//PREDICTED: uncharacterized protein LOC101263469 [Solanum lycopersicum]
Solyc03g098130.3.1	905	417.933521222338	1058.06419651416	1.34008178078868	0.000191116206611046	Up	3.58040127637959e-05	NA	NA	NA	K15113//solute carrier family 25 (mitochondrial iron transporter), member 28/37	gi|460379249|ref|XP_004235376.1|//PREDICTED: uncharacterized protein LOC101251561 [Solanum lycopersicum]
Solyc01g095630.3.1	1407	2064.11281246927	16386.9635738832	2.98895482730159	2.34936855836445e-06	Up	2.95729000357714e-07	NA	GO:0003677//DNA binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0010467//gene expression	K18835//WRKY transcription factor 2;K13459//disease resistance protein RPS2;K16225//probable WRKY transcription factor 52	gi|350539793|ref|NP_001234530.1|//WRKY transcription factor [Solanum lycopersicum]
Solyc09g011010.3.1	1008	1416.4586322121	84.1553183535337	-4.07309020982037	3.1953553012905e-20	Down	5.75278295259919e-22	GO:0043231//intracellular membrane-bounded organelle	NA	NA	NA	gi|970053996|ref|XP_015088629.1|//PREDICTED: high-light-induced protein, chloroplastic [Solanum pennellii]
Solyc01g060010.2.1	828	0.676953693686294	9.54608815236775	3.81778060263692	0.0253236957138255	Up	0.00848024758807992	NA	GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds	GO:0008152//metabolic process	K19892//glucan endo-1,3-beta-glucosidase 4 [EC:3.2.1.39]	gi|969996441|ref|XP_015063196.1|//PREDICTED: glucan endo-1,3-beta-glucosidase, basic isoform 1-like [Solanum pennellii]
Solyc06g072335.1.1	3648	30.661865354348	86.7402826388108	1.50025667626671	0.034701855225836	Up	0.0121769518822134	NA	GO:0005515//protein binding	NA	K09539//DnaJ homolog subfamily C member 19	gi|460391730|ref|XP_004241472.1|//PREDICTED: mitochondrial import inner membrane translocase subunit TIM14-3-like [Solanum lycopersicum]
Solyc04g074790.2.1	3813	114.624360101684	265.397084025008	1.21123883969442	0.00145699846896293	Up	0.00033606331168714	NA	NA	NA	K19041//E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27];K10664//E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:2.3.2.27]	gi|460384513|ref|XP_004237955.1|//PREDICTED: RING-H2 finger protein ATL54-like [Solanum lycopersicum]
Solyc12g009240.1.1	747	606.696135453898	2555.4798655897	2.07454819770756	0.0281174045267062	Up	0.0095562283612087	NA	NA	NA	K09286//EREBP-like factor	gi|460412633|ref|XP_004251702.1|//PREDICTED: ethylene-responsive transcription factor ERF017 [Solanum lycopersicum]
Solyc12g009820.2.1	2225	380.22580286649	92.6934329929978	-2.03631740175199	0.000311666110853755	Down	6.11529151458985e-05	NA	NA	NA	K03715//1,2-diacylglycerol 3-beta-galactosyltransferase [EC:2.4.1.46]	gi|460412699|ref|XP_004251735.1|//PREDICTED: monogalactosyldiacylglycerol synthase 2, chloroplastic-like [Solanum lycopersicum]
Solyc11g068800.2.1	1574	238.821844762205	880.253232915313	1.88198381638846	8.04276183958074e-06	Up	1.12541106104764e-06	NA	NA	NA	K06620//transcription factor E2F3	gi|460411374|ref|XP_004251087.1|//PREDICTED: transcription factor E2FB-like [Solanum lycopersicum]
Solyc10g085830.2.1	1385	1602.85807504406	76.9914333414065	-4.37980494819167	5.37683225454752e-14	Down	2.01420769935152e-15	NA	GO:0008171//O-methyltransferase activity;GO:0005515//protein binding	GO:0006730//one-carbon metabolic process	K13066//caffeic acid 3-O-methyltransferase [EC:2.1.1.68];K05279//flavonol 3-O-methyltransferase [EC:2.1.1.76]	gi|723739774|ref|XP_010312333.1|//PREDICTED: caffeic acid 3-O-methyltransferase 1 [Solanum lycopersicum]
Solyc12g088690.2.1	3714	690.209433219062	33.532956871586	-4.36338258356128	5.31291279373071e-13	Down	2.26355275206285e-14	GO:0043231//intracellular membrane-bounded organelle	GO:0080043//quercetin 3-O-glucosyltransferase activity;GO:0080044//quercetin 7-O-glucosyltransferase activity	GO:0009813//flavonoid biosynthetic process;GO:0052696//flavonoid glucuronidation	K13496//UDP-glucosyl transferase 73C [EC:2.4.1.-];K14595//abscisate beta-glucosyltransferase [EC:2.4.1.263];K18822//soyasapogenol B glucuronide galactosyltransferase [EC:2.4.1.272]	gi|565351386|ref|XP_006342639.1|//PREDICTED: scopoletin glucosyltransferase-like [Solanum tuberosum];gi|460414809|ref|XP_004252755.1|//PREDICTED: scopoletin glucosyltransferase-like isoform X1 [Solanum lycopersicum]
Solyc12g044200.2.1	5035	391.18715836969	70.0879730767962	-2.48062020356168	0.00372550919415049	Down	0.000962483383951732	NA	NA	NA	K13459//disease resistance protein RPS2	gi|723750945|ref|XP_004252495.2|//PREDICTED: probable disease resistance protein At1g61180 [Solanum lycopersicum]
Solyc02g088590.3.1	5428	751.839514259119	1632.2687096454	1.11838193235903	4.88312906081108e-06	Up	6.51799804933818e-07	NA	GO:0005516//calmodulin binding	NA	K03163//DNA topoisomerase I [EC:5.99.1.2]	gi|460372735|ref|XP_004232181.1|//PREDICTED: uncharacterized protein LOC101266085 [Solanum lycopersicum]
Solyc11g065680.1.1	474	446.269532288984	60.9858005297161	-2.87137003354546	3.39390700339294e-07	Down	3.63958194750317e-08	NA	NA	NA	NA	gi|460411063|ref|XP_004250934.1|//PREDICTED: uncharacterized protein LOC101247982 [Solanum lycopersicum]
Solyc05g015530.3.1	721	839.877937774709	6895.96288479701	3.0375004330071	6.35458977807093e-26	Up	6.56113526362624e-28	NA	NA	NA	NA	gi|460387092|ref|XP_004239223.1|//PREDICTED: stress-associated endoplasmic reticulum protein 2 [Solanum lycopersicum]
Solyc03g117600.3.1	7280	8334.89710605985	2922.85846703941	-1.51178441779758	0.0155018975902932	Down	0.00480230620519332	NA	GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	GO:0008152//metabolic process;GO:0050896//response to stimulus	K03283//heat shock 70kDa protein 1/8	gi|723686193|ref|XP_010318701.1|//PREDICTED: heat shock 70 kDa protein 5 [Solanum lycopersicum];gi|661898277|emb|CDO98244.1|//unnamed protein product [Coffea canephora]
Solyc08g081390.3.1	5301	995.22620034789	25.9486578355679	-5.26129264250469	4.64774797616352e-22	Down	6.99899426856293e-24	NA	NA	NA	NA	gi|460400107|ref|XP_004245577.1|//PREDICTED: phosphoglycerate mutase-like protein AT74 [Solanum lycopersicum];gi|460400109|ref|XP_004245578.1|//PREDICTED: BTB/POZ domain-containing protein At1g63850 [Solanum lycopersicum]
Solyc01g100890.3.1	1716	67.962743731176	23.4762382930602	-1.53354283966843	0.0328011535948131	Down	0.0114292971449349	GO:0016021//integral component of membrane;GO:0005886//plasma membrane	GO:0022857//transmembrane transporter activity	GO:0055085//transmembrane transport	K07874//Ras-related protein Rab-1A;K00801//farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21];K01623//fructose-bisphosphate aldolase, class I [EC:4.1.2.13]	gi|985482235|ref|NP_001306254.1|//WAT1-related protein At1g09380-like precursor [Solanum lycopersicum]
Solyc09g097770.3.1	358	6775.71969381266	24055.6394648127	1.82792905285762	0.00122085271843838	Up	0.000276179929484215	NA	NA	NA	NA	gi|350539555|ref|NP_001234188.1|//tyrosine- and lysine-rich protein precursor [Solanum lycopersicum]
Solyc09g083060.3.1	4902	1007.08661265277	2488.36506299079	1.30501039081474	0.0324124955005719	Up	0.0112697091855276	NA	GO:0004842//ubiquitin-protein transferase activity	GO:0016567//protein ubiquitination	K08332//vacuolar protein 8	gi|460404308|ref|XP_004247625.1|//PREDICTED: U-box domain-containing protein 43-like [Solanum lycopersicum]
Solyc11g005340.2.1	1586	567.675274853389	6.62016160902319	-6.42205566002732	7.13026945686241e-25	Down	7.95559225949163e-27	GO:0009536//plastid	NA	NA	K17893//ubiquinol oxidase [EC:1.10.3.11];K17637//exocyst complex component 2;K02952//small subunit ribosomal protein S13	gi|460408876|ref|XP_004249867.1|//PREDICTED: probable plastid-lipid-associated protein 7, chloroplastic isoform X1 [Solanum lycopersicum]
Solyc11g071770.1.1	3075	537.921265291203	1424.3146561394	1.40480096991266	0.00160281726671706	Up	0.000373759684679512	NA	GO:0008135//translation factor activity, RNA binding;GO:0032561//guanyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity	GO:0006412//translation;GO:0009207//purine ribonucleoside triphosphate catabolic process	K14536//ribosome assembly protein 1 [EC:3.6.5.-]	gi|460411637|ref|XP_004251212.1|//PREDICTED: elongation factor Tu GTP-binding domain-containing protein 1 [Solanum lycopersicum]
Solyc07g007820.3.1	2435	1614.78492486951	6975.04907493675	2.11086134402668	1.52812742220823e-11	Up	8.08264802487506e-13	NA	NA	NA	K20043//clathrin coat assembly protein AP180	gi|723712709|ref|XP_010323282.1|//PREDICTED: putative clathrin assembly protein At5g35200 [Solanum lycopersicum]
Solyc12g014080.2.1	1026	518.817450520215	1394.49060874018	1.42643930767324	0.00148761445060589	Up	0.000344178578161279	GO:0016020//membrane	GO:0032561//guanyl ribonucleotide binding;GO:0003824//catalytic activity	GO:0006810//transport;GO:0035556//intracellular signal transduction	K07904//Ras-related protein Rab-11A	gi|460412993|ref|XP_004251880.1|//PREDICTED: ras-related protein Rab11B [Solanum lycopersicum]
Solyc03g121860.1.1	991	1449.16129862948	5504.65302596098	1.92543344672098	8.35637464778882e-12	Up	4.25481130493497e-13	NA	NA	NA	K17794//mitochondrial import inner membrane translocase subunit TIM23	gi|460379660|ref|XP_004235579.1|//PREDICTED: mitochondrial import inner membrane translocase subunit TIM23-1-like [Solanum lycopersicum]
Solyc04g009130.3.1	3100	95.7874965892487	13.5036409110801	-2.82648890370825	1.84450422154103e-07	Down	1.88176832203585e-08	NA	NA	NA	K13457//disease resistance protein RPM1	gi|302594419|gb|ADL59399.1|//HJTR2GH1 protein [Solanum hjertingii];gi|971571930|ref|XP_015169825.1|//PREDICTED: disease resistance protein RPH8A-like [Solanum tuberosum]
Solyc05g009780.3.1	1345	2053.65094514689	631.59375641149	-1.7011221758743	1.83309506636787e-14	Down	6.40230385115063e-16	NA	GO:0043169//cation binding;GO:0008238//exopeptidase activity;GO:0008237//metallopeptidase activity	GO:0019538//protein metabolic process	K01265//methionyl aminopeptidase [EC:3.4.11.18]	gi|460386550|ref|XP_004238961.1|//PREDICTED: methionine aminopeptidase 1B, chloroplastic [Solanum lycopersicum];gi|970030486|ref|XP_015076525.1|//PREDICTED: methionine aminopeptidase 1B, chloroplastic [Solanum pennellii]
Solyc07g062700.3.1	4118	9824.13359404441	88329.428246771	3.16849208848394	5.55066383321394e-12	Up	2.75795247117719e-13	NA	NA	NA	K07300//Ca2+:H+ antiporter	gi|460397404|ref|XP_004244257.1|//PREDICTED: uncharacterized protein LOC101263533 [Solanum lycopersicum]
Solyc10g005925.1.1	3475	1266.13779551529	247.585049999933	-2.35443831617283	2.6345276952355e-08	Down	2.30673384378567e-09	NA	NA	NA	K12616//enhancer of mRNA-decapping protein 4	gi|460405651|ref|XP_004248289.1|//PREDICTED: enhancer of mRNA-decapping protein 4-like [Solanum lycopersicum]
Solyc05g014310.3.1	1027	5791.00018687787	1527.49499771865	-1.92264488790846	1.37208068360669e-09	Down	9.91846168846395e-11	NA	NA	NA	K07007//uncharacterized protein;K01392//thimet oligopeptidase [EC:3.4.24.15]	gi|460386988|ref|XP_004239174.1|//PREDICTED: uncharacterized protein LOC101256588 [Solanum lycopersicum]
Solyc09g008970.1.1	411	77.5949938531719	20.4406735951557	-1.92452083882593	0.0269186963525157	Down	0.00909962688087855	NA	NA	GO:0006950//response to stress;GO:0045333//cellular respiration	NA	gi|460402132|ref|XP_004246568.1|//PREDICTED: uncharacterized protein LOC101245195 [Solanum lycopersicum]
Solyc06g053610.3.1	1302	354.760683120435	1343.49802385813	1.92107616451212	1.99950039440614e-05	Up	3.0274431774965e-06	GO:0043231//intracellular membrane-bounded organelle	GO:0003676//nucleic acid binding	NA	K09422//myb proto-oncogene protein, plant	gi|350536735|ref|NP_001234262.1|//myb-related transcription factor [Solanum lycopersicum]
Solyc06g082830.3.1	1111	1578.61642203807	3392.07434493841	1.10350712766405	0.00189536829976757	Up	0.00045038664496117	NA	NA	NA	K08472//mlo protein	gi|460393740|ref|XP_004242467.1|//PREDICTED: uncharacterized protein LOC101265836 [Solanum lycopersicum]
Solyc10g011690.3.1	5158	471.587022441509	159.011127083753	-1.56839629330691	1.4514132122448e-06	Down	1.75664928438902e-07	GO:0005634//nucleus	GO:0005524//ATP binding;GO:0042802//identical protein binding;GO:0004672//protein kinase activity	GO:0010017//red or far-red light signaling pathway;GO:0048575//short-day photoperiodism, flowering;GO:0006468//protein phosphorylation;GO:0010100//negative regulation of photomorphogenesis;GO:0009658//chloroplast organization;GO:2000028//regulation of photoperiodism, flowering	K16240//protein suppressor of PHYA-105 1	gi|460405970|ref|XP_004248447.1|//PREDICTED: protein SUPPRESSOR OF PHYA-105 1-like isoform X2 [Solanum lycopersicum]
Solyc08g006030.3.1	2096	351.875389814992	733.178647686658	1.05910015553538	0.000756223553909806	Up	0.00016317944511644	NA	NA	NA	K12472//epidermal growth factor receptor substrate 15;K10357//myosin V;K06636//structural maintenance of chromosome 1	gi|460397813|ref|XP_004244461.1|//PREDICTED: polyamine-modulated factor 1-binding protein 1 [Solanum lycopersicum]
Solyc11g068460.2.1	1386	532.320489985471	1302.81151096588	1.29126136740153	0.000165329800778941	Up	3.05356032078295e-05	NA	GO:0046872//metal ion binding	NA	K13448//calcium-binding protein CML	gi|460411317|ref|XP_004251059.1|//PREDICTED: probable calcium-binding protein CML48 [Solanum lycopersicum];gi|971578343|ref|XP_015158694.1|//PREDICTED: probable calcium-binding protein CML48 isoform X1 [Solanum tuberosum]
Solyc12g096050.2.1	3221	312.203368080753	879.899891467181	1.49485329252796	0.00045039989642285	Up	9.17655372687974e-05	NA	GO:0008289//lipid binding	NA	NA	gi|723753594|ref|XP_010314821.1|//PREDICTED: protein ENHANCED DISEASE RESISTANCE 2 isoform X2 [Solanum lycopersicum];gi|460415484|ref|XP_004253088.1|//PREDICTED: protein ENHANCED DISEASE RESISTANCE 2 isoform X1 [Solanum lycopersicum]
Solyc05g055350.3.1	1533	1801.59543722367	597.745399942755	-1.59167205114825	5.88631104678898e-08	Down	5.51594825243309e-09	NA	NA	NA	K00784//ribonuclease Z [EC:3.1.26.11]	gi|460388125|ref|XP_004239720.1|//PREDICTED: ribonuclease Z, chloroplastic [Solanum lycopersicum]
Solyc00g084650.2.1	1160	1.18546548036963	15.7618866127487	3.73291466930579	0.00327979964455102	Up	0.000831074921114426	NA	NA	NA	K01601//ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39];K07478//putative ATPase;K15688//E3 ubiquitin-protein ligase MUL1 [EC:2.3.2.27]	gi|970061743|ref|XP_015057735.1|//PREDICTED: uncharacterized protein LOC107004029 [Solanum pennellii]
Solyc09g082200.2.1	2174	1620.31146673983	581.29556915703	-1.47892734694445	5.53159592151222e-05	Down	9.15472114638224e-06	NA	NA	NA	NA	gi|723731902|ref|XP_010326673.1|//PREDICTED: folate-biopterin transporter 1, chloroplastic [Solanum lycopersicum]
Solyc01g067900.3.1	408	1155.69596967567	292.061887865567	-1.98441590278581	1.29504490051618e-07	Down	1.28808744728214e-08	NA	NA	NA	NA	gi|460366641|ref|XP_004229189.1|//PREDICTED: rapid alkalinization factor-like [Solanum lycopersicum]
Solyc01g102390.3.1	968	360.996856954378	2290.30722270804	2.66548295363145	2.75088972767853e-13	Up	1.12586734791674e-14	GO:0005576//extracellular region	GO:0016209//antioxidant activity;GO:0046914//transition metal ion binding;GO:0003824//catalytic activity;GO:0004871//signal transducer activity	GO:0008152//metabolic process	K19476//vacuolar protein sorting-associated protein IST1;K11426//SET and MYND domain-containing protein	gi|723663458|ref|XP_004230374.2|//PREDICTED: germin-like protein 5-1 [Solanum lycopersicum];gi|460369045|ref|XP_004230375.1|//PREDICTED: germin-like protein 5-1 [Solanum lycopersicum]
Solyc05g006430.2.1	3372	34.577996687208	113.459656305311	1.71425320643029	7.3771405219034e-05	Up	1.2503301756782e-05	NA	NA	NA	K18875//enhanced disease susceptibility 1 protein;K19984//exocyst complex component 5;K02184//formin 2	gi|723697122|ref|XP_004239363.2|//PREDICTED: formin-like protein 4 [Solanum lycopersicum]
Solyc06g071750.3.1	1175	62.0770130610786	221.711491461651	1.83655250140415	4.69724467273846e-05	Up	7.62855786458978e-06	NA	NA	NA	NA	gi|460391873|ref|XP_004241543.1|//PREDICTED: uncharacterized protein LOC101267816 [Solanum lycopersicum]
Solyc12g011280.2.1	1068	6858.0269649045	178.80044679712	-5.26137133005123	4.7746805096648e-12	Down	2.34391465305969e-13	GO:0031224//intrinsic component of membrane;GO:0009521//photosystem;GO:0009534//chloroplast thylakoid	GO:0043169//cation binding;GO:0046906//tetrapyrrole binding	GO:0006464//cellular protein modification process;GO:0006091//generation of precursor metabolites and energy	K08909//light-harvesting complex I chlorophyll a/b binding protein 3	gi|460412884|ref|XP_004251826.1|//PREDICTED: chlorophyll a-b binding protein 8, chloroplastic-like [Solanum lycopersicum]
Solyc08g069230.3.1	746	695.773060636919	87.1488501123807	-2.99706328698371	1.10064115374263e-06	Down	1.30462161506693e-07	NA	NA	NA	NA	gi|460399573|ref|XP_004245312.1|//PREDICTED: uncharacterized protein LOC101250142 [Solanum lycopersicum]
Solyc11g007510.2.1	2611	1272.17185232042	2604.97343291266	1.03397508774204	0.0491475562271732	Up	0.018331922857	NA	NA	NA	K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]	gi|460409138|ref|XP_004249997.1|//PREDICTED: uncharacterized protein LOC101251943 [Solanum lycopersicum]
Solyc12g005220.2.1	1873	106.091618028142	357.939482176726	1.75440500978119	0.000131023762435926	Up	2.35498949778603e-05	NA	NA	NA	K20168//TBC1 domain family member 15	gi|460412172|ref|XP_004251476.1|//PREDICTED: TBC1 domain family member 17 [Solanum lycopersicum]
Solyc07g066550.3.1	3612	55.394393495759	1282.16593398103	4.53269920546271	2.11656404514213e-14	Up	7.46335763644124e-16	NA	GO:0004672//protein kinase activity	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460396832|ref|XP_004243974.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g56140 isoform X1 [Solanum lycopersicum]
Solyc07g017980.1.1	369	50.2848731123951	2.57246778005313	-4.28889955555452	9.16490261457053e-05	Down	1.58681126601611e-05	NA	NA	NA	NA	NA
Solyc04g071285.1.1	2424	179.007457136974	49.6524746909423	-1.85008215997244	1.04509186205439e-07	Down	1.02101750799334e-08	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial;K17710//pentatricopeptide repeat domain-containing protein 1	gi|698484977|ref|XP_009789279.1|//PREDICTED: pentatricopeptide repeat-containing protein At3g61360 [Nicotiana sylvestris]
Solyc01g081570.3.1	2971	3454.77939436746	182.904654399781	-4.23942989684831	7.22508914238122e-21	Down	1.21728801712998e-22	NA	NA	NA	K05609//ubiquitin carboxyl-terminal hydrolase L3 [EC:3.4.19.12]	gi|460367372|ref|XP_004229548.1|//PREDICTED: uncharacterized protein LOC101264758 [Solanum lycopersicum]
Solyc04g056498.1.1	532	1.06687658903752	9.62842395379078	3.17390636516667	0.0180867962890326	Up	0.00572982263532457	NA	NA	NA	K00831//phosphoserine aminotransferase [EC:2.6.1.52]	gi|970068186|ref|XP_015061215.1|//PREDICTED: uncharacterized protein LOC107007210 isoform X3 [Solanum pennellii]
Solyc01g007030.3.1	678	182.124415365367	5328.53058225285	4.87074149800938	8.556850104939e-11	Up	5.10642501043959e-12	NA	NA	NA	NA	gi|723655610|ref|XP_010315681.1|//PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin-protein ligase PUB22-like [Solanum lycopersicum]
Solyc04g008250.1.1	795	69.2773551997861	4.98808226391505	-3.79582668983927	3.57646420933257e-05	Down	5.70170621116572e-06	GO:0016021//integral component of membrane	GO:0003993//acid phosphatase activity	GO:0016311//dephosphorylation	K01078//acid phosphatase [EC:3.1.3.2];K14379//tartrate-resistant acid phosphatase type 5 [EC:3.1.3.2]	gi|723691060|ref|XP_010319554.1|//PREDICTED: purple acid phosphatase 8-like [Solanum lycopersicum]
BGI_novel_G000074	5405	40.1340962684372	3.54285749991962	-3.50184306769681	0.0169558354444754	Down	0.00530960092325325	NA	NA	NA	K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6];K20093//DNA excision repair protein ERCC-6-like [EC:3.6.4.12];K05658//ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:3.6.3.44]	gi|113205226|gb|ABI34306.1|//Polyprotein, putative [Solanum demissum]
Solyc08g081910.3.1	1235	2308.6702367476	732.826693642339	-1.65551815725207	2.80452667668181e-10	Down	1.81372215000855e-11	GO:0016469//proton-transporting two-sector ATPase complex	GO:0032559//adenyl ribonucleotide binding;GO:0019829//cation-transporting ATPase activity;GO:0015078//hydrogen ion transmembrane transporter activity	GO:0015988//energy coupled proton transmembrane transport, against electrochemical gradient;GO:0015986//ATP synthesis coupled proton transport	K02150//V-type H+-transporting ATPase subunit E	gi|565353983|ref|XP_006343898.1|//PREDICTED: V-type proton ATPase subunit E-like [Solanum tuberosum]
Solyc06g054580.3.1	1773	221.585883514212	497.829252798936	1.16778503148839	0.00247365533653032	Up	0.00060651948724081	NA	NA	NA	K10631//E3 ubiquitin-protein ligase Topors [EC:2.3.2.27]	gi|460390919|ref|XP_004241072.1|//PREDICTED: E3 ubiquitin-protein ligase Topors [Solanum lycopersicum]
Solyc03g117260.2.1	4729	30.9298193687181	113.568582231842	1.87649346773276	0.0420046730028986	Up	0.0152374190272927	NA	NA	NA	K07192//flotillin	gi|723686334|ref|XP_004236453.2|//PREDICTED: putative UPF0481 protein At3g02645 [Solanum lycopersicum]
Solyc01g095970.3.1	2704	492.897957571608	5243.57321755911	3.4111893591651	4.29896950007588e-22	Up	6.44172409061616e-24	NA	GO:0032561//guanyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity	GO:0009207//purine ribonucleoside triphosphate catabolic process	K01528//dynamin GTPase [EC:3.6.5.5]	gi|747090670|ref|XP_011093033.1|//PREDICTED: dynamin-related protein 5A-like [Sesamum indicum];gi|460368253|ref|XP_004229982.1|//PREDICTED: dynamin-related protein 5A [Solanum lycopersicum]
Solyc08g067740.3.1	4049	235.497342243686	56.1285718396956	-2.06890352177598	2.59168749465621e-06	Down	3.29708864591533e-07	NA	NA	NA	NA	gi|723722998|ref|XP_010325143.1|//PREDICTED: uncharacterized protein LOC101248410 [Solanum lycopersicum];gi|565380437|ref|XP_006356607.1|//PREDICTED: uncharacterized protein LOC102605890 [Solanum tuberosum]
Solyc10g079450.2.1	2350	336.648854102945	109.476210191511	-1.62062715616534	0.000137272522674129	Down	2.48265349640254e-05	NA	GO:0016741//transferase activity, transferring one-carbon groups	GO:0006730//one-carbon metabolic process	K16302//metal transporter CNNM;K15449//tRNA wybutosine-synthesizing protein 1 [EC:4.1.3.44]	gi|460407548|ref|XP_004249214.1|//PREDICTED: probable methyltransferase PMT6 [Solanum lycopersicum]
Solyc10g011660.3.1	2103	1787.59476746858	4940.43599419942	1.46661863858825	0.00130109856039607	Up	0.000296418458369644	NA	NA	NA	K14506//jasmonic acid-amino synthetase	gi|460405222|ref|XP_004248075.1|//PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.5 [Solanum lycopersicum]
Solyc04g009580.3.1	1644	826.049256163167	327.878579122067	-1.33306615906642	4.42725815870048e-05	Down	7.15708164391084e-06	GO:0031224//intrinsic component of membrane	GO:0017169//CDP-alcohol phosphatidyltransferase activity	GO:0006644//phospholipid metabolic process	K00995//CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase [EC:2.7.8.5]	gi|460382171|ref|XP_004236813.1|//PREDICTED: CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase 2 [Solanum lycopersicum]
Solyc12g013750.2.1	1189	842.466575411247	1726.76330792759	1.0353789882612	0.000387860468804428	Up	7.77513642921654e-05	GO:0005576//extracellular region	GO:0004567//beta-mannosidase activity;GO:0016985//mannan endo-1,4-beta-mannosidase activity;GO:0043167//ion binding	GO:0046355//mannan catabolic process;GO:0044238//primary metabolic process	K19355//mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]	gi|75263005|sp|Q9FUQ6.1|MAN3_SOLLC//RecName: Full=Mannan endo-1,4-beta-mannosidase 3; AltName: Full=Beta-mannanase 3; AltName: Full=Endo-beta-1,4-mannanase 3; AltName: Full=LeMAN3; Flags: Precursor;gi|971571307|ref|XP_015169650.1|//PREDICTED: LOW QUALITY PROTEIN: mannan endo-1,4-beta-mannosidase 1-like [Solanum tuberosum]
Solyc08g080090.3.1	1324	1859.41926864551	845.991348275413	-1.13613729660192	0.0189850204551209	Down	0.00605895874223741	NA	NA	NA	K18213//proteinaceous RNase P [EC:3.1.26.5]	gi|350535753|ref|NP_001234723.1|//senescence-inducible chloroplast stay-green protein 1 [Solanum lycopersicum]
Solyc05g053080.2.1	620	3198.80970412468	16965.9641220767	2.40703634139065	3.91412650546664e-05	Up	6.27501377859303e-06	NA	NA	NA	NA	NA
Solyc01g005775.1.1	3701	66.9161113637489	159.039352966639	1.24895827770989	0.0133724718633135	Up	0.00405690131562206	GO:0016021//integral component of membrane	NA	NA	K10406//kinesin family member C2/C3	gi|460365500|ref|XP_004228639.1|//PREDICTED: receptor-like protein 12 [Solanum lycopersicum]
Solyc04g026223.1.1	1672	315.613524068696	100.0565642867	-1.65734320684218	3.60345731650782e-08	Down	3.23704045504094e-09	NA	NA	NA	K16287//ubiquitin-like-specific protease 1C/D [EC:3.4.22.68]	gi|565349761|ref|XP_006341855.1|//PREDICTED: ubiquitin-like-specific protease 1D isoform X3 [Solanum tuberosum];gi|460383095|ref|XP_004237267.1|//PREDICTED: ubiquitin-like-specific protease 1D isoform X1 [Solanum lycopersicum];gi|970025816|ref|XP_015074215.1|//PREDICTED: ubiquitin-like-specific protease 1D isoform X2 [Solanum pennellii]
Solyc01g109900.3.1	674	1.33270453333824	9.72305854112367	2.86705324384042	0.0162672126659778	Up	0.0050703158011371	NA	NA	NA	NA	gi|723665933|ref|XP_010315317.1|//PREDICTED: uncharacterized protein LOC101246971 isoform X2 [Solanum lycopersicum]
Solyc12g008960.2.1	2012	103.386684890649	2747.43032015049	4.73196059336075	7.86525201172628e-20	Up	1.5069105166346e-21	NA	NA	NA	K17822//DCN1-like protein 1/2	gi|460412580|ref|XP_004251676.1|//PREDICTED: uncharacterized protein LOC101245524 [Solanum lycopersicum]
Solyc04g072110.3.1	2482	1231.25467980566	4947.44089368398	2.00655326368311	2.90960506086351e-12	Up	1.38712720771001e-13	NA	NA	NA	K14754//interferon-induced GTP-binding protein Mx1;K12947//signal peptidase complex subunit 2 [EC:3.4.-.-]	gi|460384283|ref|XP_004237842.1|//PREDICTED: uncharacterized protein LOC101258553 [Solanum lycopersicum]
Solyc02g069620.3.1	1435	1118.74514353849	262.581177091529	-2.09104601298335	1.02901850482932e-07	Down	1.00378016517755e-08	NA	NA	NA	K01807//ribose 5-phosphate isomerase A [EC:5.3.1.6]	gi|460374776|ref|XP_004233185.1|//PREDICTED: probable ribose-5-phosphate isomerase 4, chloroplastic isoform X1 [Solanum lycopersicum];gi|723676114|ref|XP_010316979.1|//PREDICTED: probable ribose-5-phosphate isomerase 4, chloroplastic isoform X2 [Solanum lycopersicum]
Solyc07g045300.3.1	1577	1780.46042616706	670.609166242462	-1.40870626174656	3.12507274024177e-10	Down	2.0489516220571e-11	NA	NA	NA	NA	gi|460396039|ref|XP_004243587.1|//PREDICTED: uncharacterized protein LOC101264343 [Solanum lycopersicum]
Solyc01g096510.2.1	754	673.520575126853	3732.38632780557	2.47030439901393	0.0011322348698413	Up	0.000254740184671317	NA	NA	NA	NA	gi|460368360|ref|XP_004230035.1|//PREDICTED: sigma factor binding protein 1, chloroplastic-like [Solanum lycopersicum]
Solyc09g011080.3.1	1626	12282.4261598605	24.151454116621	-8.99026979669688	3.89467399982867e-109	Down	2.90343968974852e-113	GO:0009532//plastid stroma;GO:0009570//chloroplast stroma	GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding	NA	K14571//ribosome biogenesis ATPase	gi|723727338|ref|XP_010325843.1|//PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic isoform X2 [Solanum lycopersicum];gi|970053203|ref|XP_015088235.1|//PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase 1, chloroplastic isoform X1 [Solanum pennellii]
Solyc02g076800.1.1	576	70.2520239915909	225.230309214921	1.6807892880547	5.43127941862345e-05	Up	8.97250275210195e-06	NA	NA	NA	K09597//signal peptide peptidase-like 2B [EC:3.4.23.-]	gi|460374565|ref|XP_004233081.1|//PREDICTED: probable WRKY transcription factor protein 1 [Solanum lycopersicum]
Solyc01g110990.2.1	3679	1191.10233282441	3471.30473821585	1.54318065496986	0.000180070079204895	Up	3.35064050764439e-05	NA	NA	NA	K12818//ATP-dependent RNA helicase DHX8/PRP22 [EC:3.6.4.13]	gi|460370052|ref|XP_004230869.1|//PREDICTED: probable pre-mRNA-splicing factor ATP-dependent RNA helicase [Solanum lycopersicum]
Solyc01g111070.3.1	2552	1159.60533164368	0.666852493852872	-10.7639785752422	3.17929653192302e-25	Down	3.41299165496433e-27	NA	GO:0016747//transferase activity, transferring acyl groups other than amino-acyl groups	GO:0008152//metabolic process	K08176//MFS transporter, PHS family, inorganic phosphate transporter;K00660//chalcone synthase [EC:2.3.1.74]	gi|460370166|ref|XP_004230925.1|//PREDICTED: chalcone synthase [Solanum lycopersicum]
Solyc09g011140.3.1	1186	2834.51857169573	213.850905816093	-3.7284264984747	7.94651500240402e-14	Down	3.03607345961836e-15	NA	GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K08081//tropinone reductase I [EC:1.1.1.206]	gi|460401849|ref|XP_004246428.1|//PREDICTED: tropinone reductase homolog isoform X1 [Solanum lycopersicum];gi|723727323|ref|XP_010325840.1|//PREDICTED: tropinone reductase homolog isoform X2 [Solanum lycopersicum]
Solyc04g071000.1.1	2034	36.398701813375	12.2835917921476	-1.56715452191907	0.0416691523744884	Down	0.0150830900070321	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723693718|ref|XP_010320063.1|//PREDICTED: L-type lectin-domain containing receptor kinase S.6 [Solanum lycopersicum]
Solyc06g050310.3.1	1761	1698.60818465691	410.305183558349	-2.04958382101384	1.77630421336157e-08	Down	1.51556595511579e-09	NA	NA	NA	NA	gi|460390521|ref|XP_004240879.1|//PREDICTED: uncharacterized protein LOC101260235 [Solanum lycopersicum]
Solyc01g096270.3.1	1095	1080.06581541971	2359.39065003585	1.12729508103463	3.23723618433464e-05	Up	5.11866553375113e-06	NA	NA	NA	K10534//nitrate reductase (NAD(P)H) [EC:1.7.1.1 1.7.1.2 1.7.1.3]	gi|460368314|ref|XP_004230012.1|//PREDICTED: cytochrome b5 [Solanum lycopersicum]
Solyc03g117180.3.1	2244	410.730300797688	180.722009205596	-1.18441916782973	0.0283956926874067	Down	0.0096639470599475	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460380351|ref|XP_004235920.1|//PREDICTED: probable receptor-like protein kinase At1g80640 [Solanum lycopersicum]
Solyc12g036390.2.1	1960	111.220878148667	384.322437022985	1.78888957128993	0.00418593017202472	Up	0.00109578752043125	NA	NA	NA	NA	gi|460413722|ref|XP_004252230.1|//PREDICTED: uncharacterized protein LOC101256262 [Solanum lycopersicum]
Solyc07g056570.1.1	1818	2285.27584210905	14004.1443838028	2.61541362117385	1.20432054955287e-05	Up	1.73591306288988e-06	NA	GO:0016701//oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	NA	K09840//9-cis-epoxycarotenoid dioxygenase [EC:1.13.11.51]	gi|350535531|ref|NP_001234455.1|//nine-cis-epoxycarotenoid dioxygenase [Solanum lycopersicum]
Solyc03g118510.3.1	2640	1087.28649117118	226.252893530366	-2.26472398095767	0.015847905263056	Down	0.00492485411428722	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460380044|ref|XP_004235768.1|//PREDICTED: probable inactive receptor kinase At1g48480 [Solanum lycopersicum]
Solyc10g012170.3.1	1661	315.263536029494	2346.56783407067	2.89592194610722	3.78541524252119e-10	Up	2.51439166623407e-11	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|698437100|ref|XP_009802983.1|//PREDICTED: calmodulin-binding receptor-like cytoplasmic kinase 2 [Nicotiana sylvestris];gi|460405178|ref|XP_004248053.1|//PREDICTED: calmodulin-binding receptor-like cytoplasmic kinase 2 isoform X2 [Solanum lycopersicum]
Solyc11g007485.1.1	2923	235.529128637525	3125.98505689101	3.7303334831807	4.867772392847e-10	Up	3.28594595327491e-11	NA	NA	NA	K12937//cyanidin-3-O-glucoside 2''-O-glucuronosyltransferase [EC:2.4.1.254]	gi|460410134|ref|XP_004250486.1|//PREDICTED: crocetin glucoside glucosyltransferase-like [Solanum lycopersicum]
Solyc10g084170.1.1	513	83.201726941328	429.348011210166	2.36746213058153	5.81172069882007e-05	Up	9.66164988696046e-06	NA	NA	NA	K01555//fumarylacetoacetase [EC:3.7.1.2]	gi|460408739|ref|XP_004249799.1|//PREDICTED: BAG family molecular chaperone regulator 5, mitochondrial-like [Solanum lycopersicum]
Solyc01g105350.2.1	2598	412.457799576114	15.9978940133744	-4.68829261405314	2.45569158812739e-09	Down	1.84808458194021e-10	NA	NA	NA	K04628//2-hydroxyacylsphingosine 1-beta-galactosyltransferase [EC:2.4.1.45];K13030//cyanohydrin beta-glucosyltransferase [EC:2.4.1.85]	gi|460371040|ref|XP_004231354.1|//PREDICTED: 7-deoxyloganetin glucosyltransferase-like [Solanum lycopersicum]
Solyc10g079820.2.1	593	5593.58454144609	23199.7079762763	2.05226163769964	2.22440830774534e-07	Up	2.3011063898293e-08	NA	NA	NA	NA	gi|350535643|ref|NP_001234461.1|//dehydration-induced protein ERD15 [Solanum lycopersicum]
Solyc10g055390.2.1	2043	378.068975762296	48.7684310816098	-2.95463000140769	5.83929461258579e-12	Down	2.91224697765014e-13	NA	NA	NA	K14794//ribosomal RNA-processing protein 12	gi|460406411|ref|XP_004248658.1|//PREDICTED: probable transporter mch1 [Solanum lycopersicum]
Solyc08g066940.3.1	1989	286.79846887106	60.24805073736	-2.2510508516328	0.000201768819577436	Down	3.80102733764859e-05	NA	NA	NA	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460399311|ref|XP_004245185.1|//PREDICTED: protein NRT1/ PTR FAMILY 1.2-like [Solanum lycopersicum]
Solyc05g006110.3.1	861	1916.96617930771	728.458654914688	-1.39590588725147	0.0010321213786483	Down	0.000229907460817139	NA	NA	NA	NA	gi|460386044|ref|XP_004238710.1|//PREDICTED: uncharacterized protein LOC101264624 [Solanum lycopersicum]
Solyc09g009710.3.1	3084	188.297978267063	72.2759138163194	-1.38143066042944	0.0238354812280913	Down	0.0078880572854684	NA	NA	NA	K15200//general transcription factor 3C polypeptide 2	gi|460402040|ref|XP_004246523.1|//PREDICTED: uncharacterized protein LOC101256910 isoform X1 [Solanum lycopersicum]
Solyc00g011150.1.1	207	13.6445122015011	71.9366456649945	2.39840607116514	0.0486075509630583	Up	0.018087415434032	NA	NA	NA	NA	gi|947068890|gb|KRH17781.1|//hypothetical protein GLYMA_13G015400 [Glycine max]
Solyc06g008740.3.1	1636	351.703309162559	69.1103585221505	-2.34738504076082	1.86721545452802e-07	Down	1.90841836004019e-08	NA	GO:0005488//binding	NA	K03260//translation initiation factor 4G	gi|723704305|ref|XP_004240519.2|//PREDICTED: LOW QUALITY PROTEIN: zinc finger CCCH domain-containing protein 32 [Solanum lycopersicum]
Solyc07g040960.1.1	1500	4878.326489098	31059.8578892904	2.67059300791707	0.000848133536697877	Up	0.000185508898826441	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K07936//GTP-binding nuclear protein Ran	gi|914099008|ref|NP_001234228.2|//salt responsive protein 2 [Solanum lycopersicum]
Solyc04g063360.3.1	3815	2319.66417374475	711.318797724209	-1.70534776158412	4.06773830658625e-08	Down	3.696565525368e-09	GO:0009941//chloroplast envelope	GO:0005524//ATP binding	GO:0009793//embryo development ending in seed dormancy	K03798//cell division protease FtsH [EC:3.4.24.-]	gi|460384008|ref|XP_004237707.1|//PREDICTED: ATP-dependent zinc metalloprotease FtsH [Solanum lycopersicum];gi|565379852|ref|XP_006356331.1|//PREDICTED: probable inactive ATP-dependent zinc metalloprotease FTSHI 4, chloroplastic isoform X1 [Solanum tuberosum]
Solyc09g010930.3.1	1424	5592.80467924423	2154.11079459805	-1.3764794917194	5.50763918555448e-06	Down	7.43576454826239e-07	NA	NA	NA	K09753//cinnamoyl-CoA reductase [EC:1.2.1.44];K01256//aminopeptidase N [EC:3.4.11.2];K08956//AFG3 family protein [EC:3.4.24.-]	gi|460401841|ref|XP_004246424.1|//PREDICTED: uncharacterized protein At5g02240 [Solanum lycopersicum]
Solyc01g104770.3.1	5878	482.467571405655	2859.55661560874	2.56728758797257	2.09874826585902e-11	Up	1.13667855609555e-12	NA	GO:0005524//ATP binding	NA	K03627//putative transcription factor;K10355//actin, other eukaryote	gi|723664268|ref|XP_010315046.1|//PREDICTED: uncharacterized protein LOC101264265 [Solanum lycopersicum];gi|976899273|gb|KVH87867.1|//Actin/actin-like conserved site-containing protein [Cynara cardunculus var. scolymus]
Solyc07g062930.3.1	1515	422.211175153213	126.110028155251	-1.74328176264353	8.71328103083149e-06	Down	1.22865447068867e-06	NA	NA	NA	NA	gi|460397376|ref|XP_004244243.1|//PREDICTED: uncharacterized protein LOC101259352 [Solanum lycopersicum]
Solyc03g112270.3.1	1858	1271.6878494872	2583.2944286568	1.02246749482682	0.00228209238765858	Up	0.000552829820612537	NA	NA	NA	K19613//leucine-rich repeat protein SHOC2	gi|460381047|ref|XP_004236264.1|//PREDICTED: plant intracellular Ras-group-related LRR protein 9 [Solanum lycopersicum]
Solyc05g010610.3.1	2931	321.920608836167	117.690911747797	-1.45170202096749	0.0124771290482245	Down	0.0037485336263862	NA	NA	NA	K11253//histone H3;K07953//GTP-binding protein SAR1 [EC:3.6.5.-];K12126//phytochrome-interacting factor 3	gi|460386642|ref|XP_004239006.1|//PREDICTED: transcription factor bHLH49 [Solanum lycopersicum]
Solyc11g010910.2.1	450	0.422836593632716	5.5025215449288	3.70192074626486	0.0291629481515968	Up	0.00996066014046948	NA	NA	NA	K14963//COMPASS component SWD3	gi|460409477|ref|XP_004250165.1|//PREDICTED: guanine nucleotide-binding protein subunit beta-like protein 1 homolog [Solanum lycopersicum]
Solyc02g090900.3.1	4933	690.719318568835	110.713196456751	-2.6412723802487	5.99518536898689e-13	Down	2.58551866405167e-14	NA	NA	NA	K14411//RNA-binding protein Musashi	gi|460372419|ref|XP_004232028.1|//PREDICTED: uncharacterized protein LOC101267952 [Solanum lycopersicum];gi|971537288|ref|XP_015168712.1|//PREDICTED: uncharacterized protein LOC102591955 isoform X1 [Solanum tuberosum]
Solyc08g007810.2.1	417	0.784246948461694	88.6806508039535	6.82116753708605	2.24396978365385e-11	Up	1.22620385523950e-12	NA	NA	NA	NA	NA
BGI_novel_G000511	305	6.53010775073891	0.362083430950513	-4.17271273204428	0.00899669693739988	Down	0.00259290520053585	NA	NA	NA	K09260//MADS-box transcription enhancer factor 2A	gi|970066830|ref|XP_015060461.1|//PREDICTED: agamous-like MADS-box protein AGL80 [Solanum pennellii]
Solyc01g100320.3.1	1551	2003.3503549324	5587.78923021994	1.47986285551608	2.82616448492568e-07	Up	2.97596342251194e-08	GO:0043231//intracellular membrane-bounded organelle	GO:0015036//disulfide oxidoreductase activity	GO:0019725//cellular homeostasis;GO:0018904//ether metabolic process	K09584//protein disulfide-isomerase A6 [EC:5.3.4.1]	gi|960513859|ref|NP_001304722.1|//protein disulfide-isomerase like 2-1 precursor [Solanum lycopersicum]
Solyc09g097965.1.1	764	29.2637210203015	611.89444479458	4.38609766969886	7.28304952885202e-13	Up	3.18501984207682e-14	NA	NA	NA	NA	gi|195608730|gb|ACG26195.1|//IN2-2 protein [Zea mays]
Solyc07g063510.3.1	2239	735.552381048473	158.429437889631	-2.21498765554246	9.43319318490861e-07	Down	1.09845294131708e-07	NA	GO:0048037//cofactor binding	GO:0019752//carboxylic acid metabolic process	NA	gi|723718574|ref|XP_010324352.1|//PREDICTED: uncharacterized protein LOC101245382 [Solanum lycopersicum]
Solyc10g006530.3.1	798	2239.30873219332	86.9007247706208	-4.68754142572969	4.95644559669211e-17	Down	1.26368301332093e-18	NA	NA	NA	K08901//photosystem II oxygen-evolving enhancer protein 3	gi|460405828|ref|XP_004248376.1|//PREDICTED: psbQ-like protein 2, chloroplastic [Solanum lycopersicum]
Solyc01g080210.3.1	1823	438.946929628456	145.621437589854	-1.59182376609923	3.66087697613934e-06	Down	4.77464162051273e-07	NA	GO:0046872//metal ion binding;GO:0004748//ribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptor;GO:0016728//oxidoreductase activity, acting on CH or CH2 groups, disulfide as acceptor	GO:0009186//deoxyribonucleoside diphosphate metabolic process;GO:0009132//nucleoside diphosphate metabolic process;GO:0055114//oxidation-reduction process	K10808//ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]	gi|460367182|ref|XP_004229454.1|//PREDICTED: ribonucleoside-diphosphate reductase small chain A-like [Solanum lycopersicum]
Solyc02g090560.3.1	3591	79.6134365726362	1191.71558542104	3.90388421455549	1.96485102429023e-15	Up	6.0129070036614e-17	NA	NA	NA	K01537//Ca2+-transporting ATPase [EC:3.6.3.8]	gi|460375690|ref|XP_004233637.1|//PREDICTED: calcium-transporting ATPase 12, plasma membrane-type-like [Solanum lycopersicum]
Solyc07g008410.3.1	1566	398.851762451425	20.6624714603191	-4.27076792099662	0.000235457914505362	Down	4.49097267229737e-05	NA	NA	NA	K03327//multidrug resistance protein, MATE family	gi|460394402|ref|XP_004242792.1|//PREDICTED: protein TRANSPARENT TESTA 12-like [Solanum lycopersicum];gi|565404546|ref|XP_006367697.1|//PREDICTED: protein DETOXIFICATION 32-like [Solanum tuberosum];gi|697165667|ref|XP_009591643.1|//PREDICTED: protein TRANSPARENT TESTA 12 [Nicotiana tomentosiformis]
Solyc02g070580.1.1	1506	331.479553231897	1090.38438807736	1.71784502322497	0.00170435562519642	Up	0.000399660848296954	NA	GO:0005506//iron ion binding;GO:0016491//oxidoreductase activity	NA	K09832//sterol 22-desaturase [EC:1.14.19.41]	gi|350536665|ref|NP_001234514.1|//sterol 22-desaturase [Solanum lycopersicum]
Solyc12g005240.1.1	966	1236.75048361007	221.822645110598	-2.47907590573465	4.64996705974372e-05	Down	7.54611787691906e-06	NA	NA	NA	NA	gi|723747007|ref|XP_010313653.1|//PREDICTED: uncharacterized protein LOC104644816 [Solanum lycopersicum]
Solyc06g005480.3.1	1270	75.8610008183578	394.934952197318	2.38018474357323	2.90633404172141e-05	Up	4.54561564002647e-06	NA	NA	NA	NA	gi|460389440|ref|XP_004240360.1|//PREDICTED: uncharacterized protein LOC101253593 isoform X1 [Solanum lycopersicum]
Solyc04g078200.3.1	559	553.742000854945	4.71706933375954	-6.87517933652169	2.70346278423436e-32	Down	1.61232311569069e-34	GO:0030312//external encapsulating structure	NA	GO:0006950//response to stress	K03860//phosphatidylinositol glycan, class Q;K20887	gi|723695198|ref|XP_010320309.1|//PREDICTED: LOW QUALITY PROTEIN: snakin-1-like [Solanum lycopersicum]
Solyc05g006130.3.1	1994	789.96202656068	223.56094443686	-1.82111512985539	1.51621792229195e-06	Down	1.8446903602061e-07	NA	GO:0017111//nucleoside-triphosphatase activity;GO:0005488//binding	NA	K11594//ATP-dependent RNA helicase DDX3X [EC:3.6.4.13];K12858//ATP-dependent RNA helicase DDX23/PRP28 [EC:3.6.4.13];K14805//ATP-dependent RNA helicase DDX24/MAK5 [EC:3.6.4.13]	gi|460386046|ref|XP_004238711.1|//PREDICTED: DEAD-box ATP-dependent RNA helicase 22 [Solanum lycopersicum]
Solyc07g054060.3.1	2295	957.520875060835	195.515464459115	-2.29202121658229	0.000158631586213356	Down	2.91920434298247e-05	NA	NA	NA	NA	gi|970042555|ref|XP_015082670.1|//PREDICTED: uncharacterized protein LOC107026277 [Solanum pennellii]
BGI_novel_G000077	5158	929.810860480876	423.006381659621	-1.13625784844444	0.00592094509595617	Down	0.0016208223044842	NA	NA	NA	K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6];K14760//acyl-activating enzyme 14 [EC:6.2.1.26]	gi|147827119|emb|CAN62181.1|//hypothetical protein VITISV_044399 [Vitis vinifera]
Solyc08g082460.3.1	2879	12.7189420381726	178.497025340997	3.81084945456662	8.65521872304817e-15	Up	2.86808164782683e-16	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460401158|ref|XP_004246095.1|//PREDICTED: probable inactive receptor kinase At1g48480 [Solanum lycopersicum]
Solyc01g066613.1.1	4508	1682.44776916818	183.644023801407	-3.19557786438043	0.00164494118494849	Down	0.000384318299808303	NA	NA	NA	K07466//replication factor A1;K15255//ATP-dependent DNA helicase PIF1 [EC:3.6.4.12]	gi|723726857|ref|XP_010325772.1|//PREDICTED: uncharacterized protein LOC101258482 [Solanum lycopersicum];gi|971570010|ref|XP_015169312.1|//PREDICTED: uncharacterized protein LOC107062781 [Solanum tuberosum]
Solyc06g019170.3.1	2666	1144.62797021435	43.9935565820258	-4.70144271789207	8.77975115115029e-25	Down	9.94872651688419e-27	GO:0044424//intracellular part	GO:0016774//phosphotransferase activity, carboxyl group as acceptor;GO:0016620//oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor;GO:0032559//adenyl ribonucleotide binding	GO:0006796//phosphate-containing compound metabolic process;GO:0006560//proline metabolic process	K12657//delta-1-pyrroline-5-carboxylate synthetase [EC:2.7.2.11 1.2.1.41]	gi|460390115|ref|XP_004240687.1|//PREDICTED: delta-1-pyrroline-5-carboxylate synthase-like isoform X2 [Solanum lycopersicum]
Solyc01g007920.2.1	1145	570.781943741966	160.866196265838	-1.827078500815	4.33593008513179e-06	Down	5.70348034223672e-07	NA	NA	NA	K17604//zinc finger SWIM domain-containing protein 3	gi|460365333|ref|XP_004228557.1|//PREDICTED: uncharacterized protein LOC101252316 [Solanum lycopersicum]
Solyc09g009100.3.1	3522	3324.27384375673	976.594950875889	-1.76720700773026	3.77319748786326e-11	Down	2.13356962467891e-12	GO:0043231//intracellular membrane-bounded organelle;GO:0005634//nucleus	GO:0003677//DNA binding;GO:0043565//sequence-specific DNA binding;GO:0003700//transcription factor activity, sequence-specific DNA binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0006355//regulation of transcription, DNA-templated;GO:0006351//transcription, DNA-templated	K09419//heat shock transcription factor, other eukaryote	gi|350539978|ref|NP_001234854.1|//heat stress transcription factor A3 [Solanum lycopersicum]
Solyc03g079960.3.1	2068	55.8655531445303	16.8942304392685	-1.72542835263348	0.00655734067884312	Down	0.00181654077550179	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460378573|ref|XP_004235045.1|//PREDICTED: thaumatin-like protein 1b [Solanum lycopersicum]
Solyc06g005450.1.1	1464	411.067123327259	854.584054740297	1.05584840730323	0.00336102607275386	Up	0.000854789059728625	NA	NA	NA	K03283//heat shock 70kDa protein 1/8	gi|970033412|ref|XP_015078010.1|//PREDICTED: probable mediator of RNA polymerase II transcription subunit 37c [Solanum pennellii]
Solyc05g056090.3.1	2548	306.206692044512	789.888226456732	1.36714270562401	3.75816025228747e-06	Up	4.90992682431325e-07	NA	NA	NA	K17966//transmembrane protein 70, mitochondrial	gi|460388023|ref|XP_004239671.1|//PREDICTED: uncharacterized protein LOC101252779 [Solanum lycopersicum]
Solyc10g038130.2.1	2228	1060.55149151382	458.844111712905	-1.20873866884866	2.57152738320529e-05	Down	3.98266597480915e-06	NA	GO:0016787//hydrolase activity	NA	K19882//O-palmitoleoyl-L-serine hydrolase [EC:3.1.1.98]	gi|698453126|ref|XP_009779872.1|//PREDICTED: protein notum homolog [Nicotiana sylvestris];gi|723735360|ref|XP_010327277.1|//PREDICTED: protein notum homolog isoform X1 [Solanum lycopersicum]
Solyc08g077920.3.1	1705	742.704223674336	2057.96603966458	1.47035948734045	0.000151904978669735	Up	2.78013062944833e-05	GO:0009536//plastid	GO:0004448//isocitrate dehydrogenase activity;GO:0046872//metal ion binding;GO:0000166//nucleotide binding	GO:0008652//cellular amino acid biosynthetic process;GO:0006551//leucine metabolic process;GO:0009060//aerobic respiration	K00030//isocitrate dehydrogenase (NAD+) [EC:1.1.1.41]	gi|460400595|ref|XP_004245819.1|//PREDICTED: 3-isopropylmalate dehydrogenase, chloroplastic-like [Solanum lycopersicum];gi|460400593|ref|XP_004245818.1|//PREDICTED: 3-isopropylmalate dehydrogenase, chloroplastic [Solanum lycopersicum]
Solyc05g026550.3.1	916	2509.34862346748	757.373294521862	-1.72823646123959	1.69220451070109e-09	Down	1.24322912277913e-10	NA	NA	NA	NA	gi|460387334|ref|XP_004239333.1|//PREDICTED: uncharacterized protein LOC101268280 [Solanum lycopersicum]
Solyc01g008100.3.1	1183	1180.97264386613	467.596176195912	-1.33664050915256	2.38466823491264e-06	Down	3.00972366311846e-07	NA	NA	NA	NA	gi|460365298|ref|XP_004228540.1|//PREDICTED: uncharacterized protein At4g14100 [Solanum lycopersicum]
Solyc02g069960.3.1	855	8.10601354522808	103.939031692583	3.68060112750626	1.64621301178391e-05	Up	2.44811573192744e-06	NA	NA	NA	K12581//CCR4-NOT transcription complex subunit 7/8;K13126//polyadenylate-binding protein;K01054//acylglycerol lipase [EC:3.1.1.23]	gi|460374723|ref|XP_004233159.1|//PREDICTED: transcription factor JUNGBRUNNEN 1-like [Solanum lycopersicum]
Solyc01g060180.3.1	2181	3563.18280787498	1198.58739908616	-1.57183139049578	0.0018424388004587	Down	0.000436485064347918	NA	NA	NA	K00666//fatty-acyl-CoA synthase [EC:6.2.1.-];K01904//4-coumarate--CoA ligase [EC:6.2.1.12]	gi|460366246|ref|XP_004228999.1|//PREDICTED: acetate/butyrate--CoA ligase AAE7, peroxisomal-like [Solanum lycopersicum];gi|697163196|ref|XP_009590417.1|//PREDICTED: acetate/butyrate--CoA ligase AAE7, peroxisomal-like [Nicotiana tomentosiformis]
Solyc08g077700.3.1	5475	17.1713945796201	2.40196079499748	-2.83772270441935	0.00712111704667598	Down	0.00199660960284392	NA	NA	NA	K03260//translation initiation factor 4G	gi|723726391|ref|XP_010325683.1|//PREDICTED: eukaryotic translation initiation factor 4G-like [Solanum lycopersicum]
Solyc09g091470.3.1	4434	2908.90033408042	6437.32584852956	1.14598763083912	0.0301763102910833	Up	0.0103695916420716	NA	GO:0016747//transferase activity, transferring acyl groups other than amino-acyl groups	NA	K07513//acetyl-CoA acyltransferase 1 [EC:2.3.1.16]	gi|460404718|ref|XP_004247828.1|//PREDICTED: 3-ketoacyl-CoA thiolase 2, peroxisomal [Solanum lycopersicum]
Solyc05g007210.2.1	589	9.23573726668411	0.417175108341027	-4.4685021486735	0.00428185393123371	Down	0.00112425000341473	GO:0043231//intracellular membrane-bounded organelle	NA	NA	NA	gi|460386189|ref|XP_004238782.1|//PREDICTED: transcription factor PRE6-like [Solanum lycopersicum]
Solyc10g005000.3.1	1697	90.4007210274049	19.5148172664495	-2.21176432580222	0.0337459151582801	Down	0.0118050325689749	NA	NA	NA	K14411//RNA-binding protein Musashi	gi|460405924|ref|XP_004248424.1|//PREDICTED: protein IQ-DOMAIN 14-like [Solanum lycopersicum]
Solyc03g097030.3.1	2256	986.883134566571	255.116547322011	-1.95172277490981	1.12012451654605e-09	Down	7.99552128069809e-11	NA	GO:0016703//oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)	GO:0008152//metabolic process	K01904//4-coumarate--CoA ligase [EC:6.2.1.12]	gi|460379083|ref|XP_004235294.1|//PREDICTED: 4-coumarate--CoA ligase 2 [Solanum lycopersicum]
Solyc06g068980.3.1	2092	1084.25505517786	353.047435362201	-1.61877022780228	1.18893945877714e-06	Down	1.41814755780783e-07	NA	NA	NA	K04424//sterile alpha motif and leucine zipper containing kinase AZK [EC:2.7.11.25]	gi|297734308|emb|CBI15555.3|//unnamed protein product [Vitis vinifera];gi|970035706|ref|XP_015079187.1|//PREDICTED: serine/threonine-protein kinase EDR1-like isoform X2 [Solanum pennellii];gi|723708888|ref|XP_010322621.1|//PREDICTED: serine/threonine-protein kinase EDR1-like isoform X1 [Solanum lycopersicum]
Solyc01g094370.3.1	1941	1186.88151945506	5186.8898052935	2.1276937951673	1.30003970240424e-06	Up	1.56181152558852e-07	NA	NA	NA	K09422//myb proto-oncogene protein, plant	gi|460368168|ref|XP_004229941.1|//PREDICTED: myb-related protein Zm38-like [Solanum lycopersicum]
Solyc09g006000.3.1	948	1536.96920695189	738.664341872932	-1.05709742095719	0.0088521410465406	Down	0.0025446440938915	NA	NA	NA	K06940//uncharacterized protein	gi|460402454|ref|XP_004246727.1|//PREDICTED: uncharacterized protein LOC101266968 [Solanum lycopersicum]
Solyc01g111340.3.1	1624	8.68602100269166	46.1529441631471	2.40965533608509	0.00160464533328291	Up	0.00037424578240462	NA	NA	NA	K01181//endo-1,4-beta-xylanase [EC:3.2.1.8]	gi|723666297|ref|XP_010315367.1|//PREDICTED: endo-1,4-beta-xylanase UM03411 isoform X2 [Solanum lycopersicum];gi|460371240|ref|XP_004231450.1|//PREDICTED: endo-1,4-beta-xylanase UM03411 isoform X1 [Solanum lycopersicum]
Solyc08g005510.2.1	4562	23.0532614888424	1.66287428328736	-3.79321986501834	0.00193783014483458	Down	0.000461560109791745	NA	NA	NA	K03283//heat shock 70kDa protein 1/8	gi|723719355|ref|XP_010324492.1|//PREDICTED: TMV resistance protein N-like [Solanum lycopersicum]
Solyc06g067870.3.1	3570	12.666753923275	0.727171108531632	-4.12260816534782	0.0020193004894984	Down	0.000482997287949576	NA	GO:0016491//oxidoreductase activity	NA	K05282//gibberellin 20-oxidase [EC:1.14.11.12];K04125//gibberellin 2-oxidase [EC:1.14.11.13];K01951//GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]	gi|460392222|ref|XP_004241716.1|//PREDICTED: 2-oxoglutarate-dependent dioxygenase AOP2-like [Solanum lycopersicum]
Solyc09g090770.2.1	721	37.7345560559214	9.70719066423742	-1.95876056701044	0.0460903747236965	Down	0.017015024275514	NA	NA	NA	NA	gi|697121271|ref|XP_009614608.1|//PREDICTED: uncharacterized protein LOC104107490 [Nicotiana tomentosiformis]
Solyc03g117860.3.1	551	532.035373073287	4654.82408840833	3.12913257406438	2.01812354202656e-05	Up	3.06013365475027e-06	NA	NA	NA	K11975//E3 ubiquitin-protein ligase RNF144 [EC:2.3.2.27]	gi|460380253|ref|XP_004235872.1|//PREDICTED: probable E3 ubiquitin-protein ligase RNF217 [Solanum lycopersicum]
Solyc01g080460.3.1	3371	8773.96259642682	583.547422293979	-3.91030674893828	3.2792600595754e-09	Down	2.5167722016795e-10	NA	NA	NA	K01006//pyruvate, orthophosphate dikinase [EC:2.7.9.1]	gi|723658980|ref|XP_010322950.1|//PREDICTED: pyruvate, phosphate dikinase, chloroplastic [Solanum lycopersicum]
Solyc01g096460.2.1	1294	304.38364514839	1123.51268266784	1.88405366181467	6.74518586633111e-10	Up	4.65133213534835e-11	NA	NA	NA	K14431//transcription factor TGA;K08332//vacuolar protein 8	gi|460368354|ref|XP_004230032.1|//PREDICTED: U-box domain-containing protein 11 [Solanum lycopersicum]
Solyc01g096810.3.1	2172	3087.89222215231	7731.80190203477	1.32418227589441	0.00212545696320578	Up	0.000511082558134804	GO:0043231//intracellular membrane-bounded organelle	GO:0001071//nucleic acid binding transcription factor activity	GO:0010467//gene expression	K14514//ethylene-insensitive protein 3	gi|350537359|ref|NP_001234546.1|//EIL3 protein [Solanum lycopersicum]
Solyc03g115005.1.1	525	164.329930005384	7.25581173116109	-4.50131443497998	1.55231743599201e-09	Down	1.13293482170581e-10	NA	NA	NA	K08901//photosystem II oxygen-evolving enhancer protein 3	gi|723687044|ref|XP_010318860.1|//PREDICTED: psbQ-like protein 3, chloroplastic [Solanum lycopersicum]
Solyc12g014280.2.1	1775	390.477937611504	143.344746915638	-1.44575200116529	0.000108809949324517	Down	1.91597659389078e-05	NA	NA	NA	K01148//poly(A)-specific ribonuclease [EC:3.1.13.4]	gi|460413023|ref|XP_004251895.1|//PREDICTED: uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Solanum lycopersicum]
Solyc04g015600.3.1	3582	297.786966066579	25.8826812292626	-3.5242216281966	3.85205921952318e-09	Down	2.99228098012759e-10	GO:0016021//integral component of membrane	GO:0005524//ATP binding;GO:0004672//protein kinase activity	GO:0006468//protein phosphorylation	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K17422//large subunit ribosomal protein L41	gi|460381771|ref|XP_004236615.1|//PREDICTED: leucine-rich repeat receptor-like tyrosine-protein kinase At2g41820 [Solanum lycopersicum]
Solyc07g017880.3.1	1256	2.95246923940557	40.1809192451098	3.76651663597305	8.50159994938529e-05	Up	1.46246025668753e-05	NA	GO:0016209//antioxidant activity;GO:0005506//iron ion binding;GO:0003824//catalytic activity	GO:0008152//metabolic process;GO:0006950//response to stress	K00430//peroxidase [EC:1.11.1.7]	gi|460394645|ref|XP_004242911.1|//PREDICTED: peroxidase 16 [Solanum lycopersicum]
Solyc02g093460.3.1	2203	883.4140738358	144.612283084218	-2.61089971922137	1.70971019906463e-14	Down	5.9458760091222e-16	NA	NA	GO:0009451//RNA modification	K03177//tRNA pseudouridine55 synthase [EC:5.4.99.25]	gi|460372032|ref|XP_004231838.1|//PREDICTED: uncharacterized protein LOC101259995 [Solanum lycopersicum]
Solyc09g082820.3.1	1430	211.786742280138	39.4940110046203	-2.42290648013496	0.00109200207609029	Down	0.000244869650597193	NA	NA	NA	NA	NA
Solyc04g045560.3.1	1718	62.6430851815188	24.7900568868672	-1.33739368528381	0.00414759801050424	Down	0.00108436157915897	NA	NA	NA	K20641;K13415//protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1]	gi|723692967|ref|XP_004237694.2|//PREDICTED: squamosa promoter-binding-like protein 3 [Solanum lycopersicum]
Solyc04g076870.3.1	2695	8970.02850310642	984.603652009595	-3.18749757363131	6.31548487263062e-13	Down	2.72836102854439e-14	GO:0009536//plastid	GO:0016620//oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor;GO:0016616//oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;GO:0000166//nucleotide binding	GO:0006779//porphyrin-containing compound biosynthetic process	K02492//glutamyl-tRNA reductase [EC:1.2.1.70]	gi|460384676|ref|XP_004238036.1|//PREDICTED: glutamyl-tRNA reductase 1, chloroplastic [Solanum lycopersicum]
Solyc01g106910.3.1	1415	104.623889389448	7.21331556150625	-3.8584059591469	2.16496379420518e-11	Down	1.17738265086676e-12	NA	NA	NA	NA	gi|460369682|ref|XP_004230686.1|//PREDICTED: putative uncharacterized protein DDB_G0284695 [Solanum lycopersicum]
Solyc02g005180.3.1	1803	1018.19307899374	70.8397375435837	-3.84530848701869	5.130542554861e-19	Down	1.05563571279382e-20	NA	NA	NA	K08145//MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8	gi|460371267|ref|XP_004231463.1|//PREDICTED: sugar transporter ERD6-like 5 isoform X1 [Solanum lycopersicum];gi|565356920|ref|XP_006345308.1|//PREDICTED: sugar transporter ERD6-like 5 [Solanum tuberosum]
Solyc04g005160.2.1	2902	1660.06306558987	28955.2454299535	4.12451476989488	3.06719366760338e-16	Up	8.62033705596e-18	NA	GO:0004616//phosphogluconate dehydrogenase (decarboxylating) activity	GO:0006098//pentose-phosphate shunt;GO:0055114//oxidation-reduction process	K00033//6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]	gi|460382686|ref|XP_004237068.1|//PREDICTED: 6-phosphogluconate dehydrogenase, decarboxylating 3-like [Solanum lycopersicum]
Solyc06g065640.3.1	3347	3363.20873944568	1578.72014568198	-1.09108287107452	2.26971959891822e-06	Down	2.8485708549119e-07	NA	NA	NA	K14972//PAX-interacting protein 1;K01507//inorganic pyrophosphatase [EC:3.6.1.1];K16482//centriolar protein POC1;K12662//U4/U6 small nuclear ribonucleoprotein PRP4;K14963//COMPASS component SWD3	gi|970035684|ref|XP_015079177.1|//PREDICTED: transcriptional corepressor LEUNIG isoform X4 [Solanum pennellii];gi|971561299|ref|XP_015166908.1|//PREDICTED: transcriptional corepressor LEUNIG isoform X3 [Solanum tuberosum];gi|565374203|ref|XP_006353653.1|//PREDICTED: transcriptional corepressor LEUNIG isoform X5 [Solanum tuberosum];gi|565374199|ref|XP_006353651.1|//PREDICTED: transcriptional corepressor LEUNIG isoform X2 [Solanum tuberosum]
Solyc02g081850.3.1	1779	294.693112026363	59.4441618871052	-2.30960630770745	1.40661554813439e-05	Down	2.05843620172044e-06	GO:0031224//intrinsic component of membrane	GO:0005275//amine transmembrane transporter activity	GO:0015837//amine transport	K03294//basic amino acid/polyamine antiporter, APA family	gi|723673500|ref|XP_004232627.2|//PREDICTED: cationic amino acid transporter 5 [Solanum lycopersicum]
Solyc03g119910.3.1	1335	15.0926713578531	1.44410412025338	-3.38560151144229	0.0034823634730508	Down	0.000890061366285571	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K04124//gibberellin 3-beta-dioxygenase [EC:1.14.11.15]	gi|899147906|ref|NP_001233855.2|//3b-hydroxylase [Solanum lycopersicum]
Solyc01g091350.3.1	4635	369.253328292742	1797.9683480982	2.28368479349575	8.93961010451136e-25	Up	1.01965136871197e-26	NA	GO:0003678//DNA helicase activity;GO:0003676//nucleic acid binding	GO:0000726//non-recombinational repair	K10885//ATP-dependent DNA helicase 2 subunit 2	gi|460367914|ref|XP_004229815.1|//PREDICTED: ATP-dependent DNA helicase 2 subunit KU80 [Solanum lycopersicum];gi|565344674|ref|XP_006339432.1|//PREDICTED: ATP-dependent DNA helicase 2 subunit KU80 [Solanum tuberosum]
Solyc05g007780.3.1	1047	2771.12623870932	159.073833178119	-4.12270398988275	1.29652438253765e-24	Down	1.5319749115269e-26	GO:0009523//photosystem II	GO:0046872//metal ion binding	GO:0044237//cellular metabolic process	K08901//photosystem II oxygen-evolving enhancer protein 3	gi|723697494|ref|XP_010320690.1|//PREDICTED: psbQ-like protein 1, chloroplastic isoform X1 [Solanum lycopersicum]
Solyc03g058350.3.1	3942	3676.95913944858	1530.37131137815	-1.26463141052329	0.0134037291777601	Down	0.00406938177101744	NA	NA	NA	K03243//translation initiation factor 5B	gi|723681764|ref|XP_010317931.1|//PREDICTED: eukaryotic translation initiation factor 5B [Solanum lycopersicum];gi|723681767|ref|XP_010317932.1|//PREDICTED: eukaryotic translation initiation factor 5B-like [Solanum lycopersicum]
Solyc01g105020.3.1	3604	1811.71656620103	467.523607104411	-1.95424615147534	1.80419619506112e-13	Down	7.2159777743424e-15	NA	NA	NA	K17508//protein phosphatase PTC7 [EC:3.1.3.16]	gi|460369363|ref|XP_004230532.1|//PREDICTED: probable protein phosphatase 2C 62 [Solanum lycopersicum]
Solyc02g089290.3.1	2533	292.039095625149	1239.55546126804	2.0855894007166	2.08453359590119e-09	Up	1.55244450745884e-10	GO:0016021//integral component of membrane	GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity;GO:0004702//receptor signaling protein serine/threonine kinase activity	GO:0006464//cellular protein modification process;GO:0006468//protein phosphorylation	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1];K10737//DNA helicase MCM8 [EC:3.6.4.12]	gi|460372630|ref|XP_004232131.1|//PREDICTED: probable leucine-rich repeat receptor-like serine/threonine-protein kinase At5g15730 [Solanum lycopersicum]
Solyc11g010560.2.1	4063	4648.89700501937	457.328576030546	-3.34558549030126	1.9907713091787e-17	Down	4.90494943852365e-19	NA	NA	NA	K14689//solute carrier family 30 (zinc transporter), member 2;K10406//kinesin family member C2/C3;K07936//GTP-binding nuclear protein Ran	gi|723741615|ref|XP_010312645.1|//PREDICTED: kinesin-like protein KCA2 [Solanum lycopersicum]
Solyc05g014190.3.1	1518	477.408407722039	94.7361256373987	-2.33323739693121	1.24883275289683e-07	Down	1.23868493941347e-08	NA	NA	NA	K07052//uncharacterized protein	gi|460386976|ref|XP_004239168.1|//PREDICTED: uncharacterized protein LOC101254793 [Solanum lycopersicum]
Solyc01g099330.3.1	2004	70.0198918659113	232.654312773813	1.73235119208014	0.0169659367335537	Up	0.0053140288643228	NA	NA	NA	K20298//vacuolar protein sorting-associated protein 52;K18195//rhamnogalacturonan endolyase [EC:4.2.2.23]	gi|460368726|ref|XP_004230216.1|//PREDICTED: uncharacterized protein LOC101247261 [Solanum lycopersicum]
Solyc05g051870.3.1	745	110.967348369666	27.4162572960915	-2.01703169110711	0.016375891214178	Down	0.00510785215745646	NA	NA	NA	K15889//prenylcysteine alpha-carboxyl methylesterase [EC:3.1.1.-];K03036//26S proteasome regulatory subunit N6	gi|723702195|ref|XP_010321468.1|//PREDICTED: LOW QUALITY PROTEIN: major pollen allergen Lol p 11-like [Solanum lycopersicum]
Solyc07g005010.3.1	3220	241.874474240483	90.2902355707552	-1.42161664416063	0.0225258370903023	Down	0.00739395525976027	GO:0016020//membrane	GO:0004672//protein kinase activity;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K00924	gi|460393921|ref|XP_004242556.1|//PREDICTED: leucine-rich repeat receptor-like protein kinase TDR [Solanum lycopersicum]
Solyc09g066400.2.1	1555	0.622279098155533	174.117962936573	8.12828754333846	1.50293620213272e-11	Up	7.93259900931838e-13	NA	GO:0046872//metal ion binding	NA	K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30];K15472//premnaspirodiene oxygenase [EC:1.14.13.121]	gi|460403753|ref|XP_004247352.1|//PREDICTED: premnaspirodiene oxygenase-like [Solanum lycopersicum]
Solyc07g032670.2.1	1243	54.7076232977248	1.5079749757974	-5.18105748804488	5.9594182392303e-08	Down	5.58667693143887e-09	NA	NA	NA	NA	gi|565403999|ref|XP_006367438.1|//PREDICTED: uncharacterized protein LOC102587704 [Solanum tuberosum]
Solyc01g091850.3.1	5191	69.9081184200597	23.8366525464331	-1.55227835732872	0.00542566493098978	Down	0.00146562523314757	NA	NA	NA	K19199//histone-lysine N-methyltransferase SETD3 [EC:2.1.1.43]	gi|460367998|ref|XP_004229857.1|//PREDICTED: membrane protein of ER body-like protein [Solanum lycopersicum]
BGI_novel_G000381	1946	98.8304942225035	26.8329202025515	-1.88095218478173	0.00284134429103119	Down	0.00070768833132065	NA	NA	NA	NA	NA
Solyc12g088230.2.1	4091	1525.53177858574	5533.89761939096	1.85898372019267	0.000498117022645655	Up	0.000102527292345658	GO:0016021//integral component of membrane	NA	NA	K15813//beta-amyrin synthase [EC:5.4.99.39];K18643//katanin p80 WD40 repeat-containing subunit B1;K15601//lysine-specific demethylase 3 [EC:1.14.11.-]	gi|460414764|ref|XP_004252733.1|//PREDICTED: CSC1-like protein RXW8 [Solanum lycopersicum]
Solyc10g047260.1.1	192	125.055730304351	35.1069870995767	-1.83274107243023	0.0225258370903023	Down	0.00739470132899555	NA	NA	NA	NA	NA
Solyc11g022530.2.1	1436	59.8222889968918	19.49170847517	-1.61782256340417	0.0373287017479179	Down	0.0132633053754909	NA	NA	NA	NA	gi|460410420|ref|XP_004250627.1|//PREDICTED: uncharacterized protein LOC101264586 [Solanum lycopersicum]
Solyc09g008370.1.1	1848	251.142472103731	30.538155459865	-3.03982120202533	0.00536086180369011	Down	0.00144577514203203	NA	NA	NA	K14794//ribosomal RNA-processing protein 12	gi|723728139|ref|XP_010325963.1|//PREDICTED: uncharacterized protein LOC101257997 [Solanum lycopersicum]
Solyc12g042075.1.1	1110	23.8652365491801	1.17019895894155	-4.35008489136963	0.0086876916721081	Down	0.0024928377252083	NA	GO:0005488//binding	GO:0050794//regulation of cellular process;GO:0009725//response to hormone	K14486//auxin response factor	gi|460413831|ref|XP_004252281.1|//PREDICTED: auxin response factor 2-like [Solanum lycopersicum]
Solyc01g106740.3.1	2490	2654.76936245511	1155.66021645105	-1.19986924635314	0.000100659116011955	Down	1.75594402466061e-05	GO:0016020//membrane;GO:0044424//intracellular part;GO:0005739//mitochondrion;GO:0009507//chloroplast	GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0004812//aminoacyl-tRNA ligase activity;GO:0003676//nucleic acid binding	GO:0006418//tRNA aminoacylation for protein translation	K01876//aspartyl-tRNA synthetase [EC:6.1.1.12]	gi|460369658|ref|XP_004230674.1|//PREDICTED: aspartate--tRNA ligase, mitochondrial [Solanum lycopersicum]
Solyc11g073110.2.1	2254	36.9414141513964	1136.73933295548	4.94351856074551	9.93784432708181e-12	Up	5.10449883804933e-13	NA	NA	NA	NA	gi|460412131|ref|XP_004251456.1|//PREDICTED: protein UPSTREAM OF FLC [Solanum lycopersicum]
Solyc06g073165.1.1	1227	10.4692748122917	1.41197387070606	-2.89037621669267	0.0240737077040931	Down	0.00798994985446546	NA	NA	NA	K06699//proteasome activator subunit 4	gi|460391621|ref|XP_004241419.1|//PREDICTED: BURP domain-containing protein 16-like [Solanum lycopersicum]
Solyc04g040170.3.1	1052	165.694336849576	521.447737108992	1.65399836914933	1.30518923527665e-10	Up	8.01269819032593e-12	NA	NA	NA	K03013//DNA-directed RNA polymerases I, II, and III subunit RPABC1	gi|460383229|ref|XP_004237333.1|//PREDICTED: DNA-directed RNA polymerase V subunit 5A isoform X1 [Solanum lycopersicum]
Solyc08g005320.3.1	1581	8.94483003632094	83.9937817947453	3.23115655210635	3.00136428909792e-08	Up	2.65365889881477e-09	NA	NA	NA	K06911//uncharacterized protein;K05350//beta-glucosidase [EC:3.2.1.21]	gi|460397718|ref|XP_004244414.1|//PREDICTED: F-box/LRR-repeat protein At3g03360 [Solanum lycopersicum]
Solyc07g007110.3.1	1414	1474.34210202124	364.432169419673	-2.01634910151474	2.20678288083228e-11	Down	1.20294499309257e-12	NA	GO:0016859//cis-trans isomerase activity	GO:0044267//cellular protein metabolic process	K03768//peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]	gi|723713978|ref|XP_010323472.1|//PREDICTED: LOW QUALITY PROTEIN: peptidyl-prolyl cis-trans isomerase CYP28, chloroplastic [Solanum lycopersicum]
Solyc01g106790.3.1	1120	1561.52713450298	54.9148948782146	-4.82961631625807	7.17992766382338e-30	Down	5.29903711583804e-32	NA	NA	NA	NA	gi|460369664|ref|XP_004230677.1|//PREDICTED: uncharacterized protein LOC101259889 [Solanum lycopersicum]
Solyc06g074130.3.1	1381	355.545690784587	749.943659378211	1.07674724418314	0.00053808325209715	Up	0.000111736312711839	NA	NA	NA	NA	gi|723707670|ref|XP_010322442.1|//PREDICTED: R3H and coiled-coil domain-containing protein 1 isoform X1 [Solanum lycopersicum];gi|460391453|ref|XP_004241335.1|//PREDICTED: R3H and coiled-coil domain-containing protein 1 isoform X2 [Solanum lycopersicum]
Solyc03g123740.3.1	4241	1631.74432946679	5191.25949263236	1.66966957898612	1.08385589427314e-05	Up	1.54853870685439e-06	GO:0016021//integral component of membrane	GO:0005524//ATP binding;GO:0004672//protein kinase activity	GO:0006468//protein phosphorylation	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13941//2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase / dihydropteroate synthase [EC:2.7.6.3 2.5.1.15];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460379535|ref|XP_004235517.1|//PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 6 [Solanum lycopersicum]
Solyc09g011410.3.1	2434	471.243430603437	195.808982104373	-1.267025561114	0.00618249589937096	Down	0.00170002505776277	NA	NA	NA	K17679//ATP-dependent RNA helicase MSS116, mitochondrial [EC:3.6.4.13]	gi|723727246|ref|XP_010325824.1|//PREDICTED: putative DEAD-box ATP-dependent RNA helicase 33 [Solanum lycopersicum]
Solyc08g007160.3.1	1281	72.5980561245213	801.378542038285	3.46448105578507	2.92499788426295e-20	Up	5.23333451784038e-22	NA	GO:0046872//metal ion binding;GO:0005509//calcium ion binding	NA	K06268//serine/threonine-protein phosphatase 2B regulatory subunit	gi|460398003|ref|XP_004244554.1|//PREDICTED: calcineurin B-like protein 1 [Solanum lycopersicum]
Solyc04g074220.3.1	2827	539.522755901914	1625.31254284305	1.59096145498777	0.00128546535903745	Up	0.000292473555671858	NA	NA	NA	K06630//14-3-3 protein epsilon	gi|460384433|ref|XP_004237916.1|//PREDICTED: monoacylglycerol lipase abhd6-A isoform X2 [Solanum lycopersicum];gi|460384431|ref|XP_004237915.1|//PREDICTED: monoacylglycerol lipase abhd6-A isoform X1 [Solanum lycopersicum]
Solyc06g075310.3.1	1129	101.172515166503	578.427184577797	2.51531794047692	3.57003947298441e-08	Up	3.20568998450106e-09	NA	NA	NA	K18532//adenylate kinase [EC:2.7.4.3]	gi|970034506|ref|XP_015078580.1|//PREDICTED: vicilin-like antimicrobial peptides 2-3 [Solanum pennellii];gi|723707370|ref|XP_010322399.1|//PREDICTED: adenylate kinase isoenzyme 6 homolog isoform X1 [Solanum lycopersicum]
Solyc02g092700.3.1	1692	14310.4650564781	623.44861073492	-4.52065609948395	5.89313608702699e-51	Down	7.24890006231887e-54	NA	NA	NA	NA	gi|723669428|ref|XP_010316003.1|//PREDICTED: uncharacterized protein LOC101254550 [Solanum lycopersicum]
Solyc01g108220.3.1	1020	11.6048029386148	79.6576294182902	2.77909052181018	1.81277733902602e-05	Up	2.71835516434385e-06	GO:0031410//cytoplasmic vesicle	NA	NA	K09843//(+)-abscisic acid 8'-hydroxylase [EC:1.14.13.93]	gi|723665429|ref|XP_010315238.1|//PREDICTED: abscisic acid 8'-hydroxylase 4 isoform X3 [Solanum lycopersicum]
Solyc06g083040.3.1	1811	13470.5447334409	1098.5696988674	-3.6161098832066	9.0406273909607e-19	Down	1.91070364196911e-20	NA	NA	NA	K16296//serine carboxypeptidase-like clade I [EC:3.4.16.-]	gi|906394180|ref|NP_001234691.2|//wound-inducible carboxypeptidase precursor [Solanum lycopersicum];gi|971585630|ref|XP_006366824.2|//PREDICTED: LOW QUALITY PROTEIN: serine carboxypeptidase 1-like [Solanum tuberosum]
Solyc05g006340.3.1	1737	242.757326284155	498.805751326051	1.03896326376058	0.0229249646969771	Up	0.00754708842268158	NA	NA	NA	K03362//F-box and WD-40 domain protein 1/11;K14963//COMPASS component SWD3;K16794//platelet-activating factor acetylhydrolase IB subunit alpha	gi|460386066|ref|XP_004238721.1|//PREDICTED: myosin heavy chain kinase B-like [Solanum lycopersicum]
Solyc05g051430.3.1	801	18.7223794673741	1.87848538700914	-3.31712200356484	0.0442060197524571	Down	0.0161875629211323	NA	NA	NA	K02183//calmodulin	gi|460388746|ref|XP_004240026.1|//PREDICTED: ovarian cancer-associated gene 2 protein homolog [Solanum lycopersicum]
Solyc01g008770.3.1	4087	1542.2553406683	583.372737285376	-1.4025517706142	2.36541460546681e-05	Down	3.64228706395683e-06	NA	NA	NA	K20642	gi|460365223|ref|XP_004228503.1|//PREDICTED: rho GTPase-activating protein 7-like isoform X2 [Solanum lycopersicum]
Solyc08g005980.3.1	2127	1163.1574835053	389.253937873088	-1.57926290153732	7.53608614021199e-08	Down	7.207990545618e-09	NA	NA	NA	NA	gi|460397801|ref|XP_004244455.1|//PREDICTED: uncharacterized protein LOC101255314 [Solanum lycopersicum]
BGI_novel_G000419	1332	4.50474764447183	75.2402829408808	4.06198708034391	0.000317378431241753	Up	6.24157075902598e-05	NA	NA	NA	K12741//heterogeneous nuclear ribonucleoprotein A1/A3;K14850//ribosomal RNA-processing protein 8 [EC:2.1.1.287]	gi|255633684|gb|ACU17202.1|//unknown [Glycine max]
Solyc01g111570.3.1	3117	933.57123424766	397.092246678947	-1.23328591638032	0.0363848503645362	Down	0.0128624768522871	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723666367|ref|XP_010315381.1|//PREDICTED: probable receptor-like serine/threonine-protein kinase At5g57670 [Solanum lycopersicum]
Solyc03g025320.3.1	1713	2956.08825926586	1470.16858201758	-1.00770774813495	0.00875464114821083	Down	0.00251433241564651	NA	GO:0016747//transferase activity, transferring acyl groups other than amino-acyl groups	NA	K19747//BAHD acyltransferase [EC:2.3.1.-]	gi|565324125|ref|NP_001274287.1|//BAHD acyltransferase DCR-like [Solanum lycopersicum]
Solyc08g077550.3.1	1273	231.903635951136	664.420199493046	1.5185704945596	0.00109539907858712	Up	0.000245962578254392	NA	NA	NA	K08494//novel plant SNARE	gi|460400642|ref|XP_004245842.1|//PREDICTED: novel plant SNARE 11 [Solanum lycopersicum]
Solyc03g118390.3.1	2345	449.193895092844	2024.77120815614	2.17234867227481	9.76231600255988e-08	Up	9.49012976542275e-09	NA	NA	NA	K10395//kinesin family member 4/21/27	gi|460380183|ref|XP_004235837.1|//PREDICTED: uncharacterized protein LOC101264412 isoform X1 [Solanum lycopersicum]
Solyc11g010410.2.1	1131	27.1728179629469	2.5350467876987	-3.42207990885398	0.00563211674641965	Down	0.00152958113219075	NA	NA	NA	K18054//2'-deoxymugineic-acid 2'-dioxygenase / mugineic-acid 3-dioxygenase [EC:1.14.11.24 1.14.11.25]	gi|723741571|ref|XP_004250131.2|//PREDICTED: hyoscyamine 6-dioxygenase-like [Solanum lycopersicum]
Solyc07g041920.3.1	2619	28980.4395146954	67.3232024299708	-8.7497599550887	5.68654398239286e-43	Down	1.34242344601322e-45	GO:0043231//intracellular membrane-bounded organelle	GO:0004175//endopeptidase activity	GO:0019538//protein metabolic process	K01366//cathepsin H [EC:3.4.22.16]	gi|460396286|ref|XP_004243707.1|//PREDICTED: cysteine proteinase 3-like [Solanum lycopersicum]
Solyc01g067530.3.1	2939	1870.40471142575	422.672468322808	-2.14573842153219	9.95920101934927e-10	Down	7.05325851228702e-11	GO:0009570//chloroplast stroma;GO:0009706//chloroplast inner membrane	GO:0000287//magnesium ion binding;GO:0005525//GTP binding;GO:0003924//GTPase activity	GO:0009658//chloroplast organization;GO:0006364//rRNA processing;GO:0009793//embryo development ending in seed dormancy;GO:0010027//thylakoid membrane organization	K03979//GTPase [EC:3.6.5.-]	gi|723658021|ref|XP_010321129.1|//PREDICTED: GTP-binding protein OBGC, chloroplastic [Solanum lycopersicum]
Solyc01g105770.2.1	1507	459.377103666646	7.49362542818581	-5.93787127549835	8.61830234670801e-11	Down	5.14952238771915e-12	NA	NA	NA	K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6];K00430//peroxidase [EC:1.11.1.7]	gi|460371056|ref|XP_004231361.1|//PREDICTED: proteoglycan 4-like [Solanum lycopersicum]
Solyc07g019650.3.1	3351	2594.4087164475	331.117836422895	-2.96998914392075	3.44913500824624e-11	Down	1.93875637111798e-12	NA	NA	NA	K18213//proteinaceous RNase P [EC:3.1.26.5]	gi|460394692|ref|XP_004242933.1|//PREDICTED: proteinaceous RNase P 1, chloroplastic/mitochondrial-like isoform X1 [Solanum lycopersicum];gi|723713587|ref|XP_010323414.1|//PREDICTED: proteinaceous RNase P 1, chloroplastic/mitochondrial-like isoform X2 [Solanum lycopersicum]
Solyc04g082210.3.1	2639	165.682611499747	741.154487416651	2.1613520928183	2.66290302432838e-09	Up	2.01593709647045e-10	GO:0016020//membrane	NA	NA	K19476//vacuolar protein sorting-associated protein IST1;K14209//solute carrier family 36 (proton-coupled amino acid transporter)	gi|723696230|ref|XP_004238627.2|//PREDICTED: lysine histidine transporter-like 8 [Solanum lycopersicum]
Solyc04g008570.3.1	1878	692.317662103425	44.8377178250249	-3.9486493999908	3.84572446882562e-15	Down	1.2141526111135e-16	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial	gi|723690056|ref|XP_004237182.2|//PREDICTED: pentatricopeptide repeat-containing protein At5g13770, chloroplastic [Solanum lycopersicum]
Solyc08g077460.3.1	2703	2549.3102187086	1253.8405529147	-1.02375304505578	0.0283956926874067	Down	0.00966456947699084	NA	NA	NA	K19042//E3 ubiquitin-protein ligase BOI and related proteins [EC:2.3.2.27]	gi|460400659|ref|XP_004245850.1|//PREDICTED: BOI-related E3 ubiquitin-protein ligase 1 [Solanum lycopersicum]
Solyc04g007580.1.1	495	449.092598265899	8158.02169300938	4.18313449380702	1.36818039037675e-06	Up	1.64826264413958e-07	NA	NA	NA	NA	gi|460382597|ref|XP_004237025.1|//PREDICTED: uncharacterized protein LOC101267223 [Solanum lycopersicum]
Solyc09g012000.1.1	2010	171.546437647797	28.840780136777	-2.57241707223903	5.34298118846429e-05	Down	8.8146841882149e-06	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|998072093|ref|NP_001307189.1|//L-type lectin-domain containing receptor kinase IV.1-like precursor [Solanum lycopersicum]
Solyc08g016310.3.1	4176	1319.80161356846	7679.0022574703	2.54059778524016	4.07062270816102e-08	Up	3.70070403503978e-09	NA	NA	NA	K13466//EIX receptor 1/2;K10406//kinesin family member C2/C3;K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|723720816|ref|XP_010324747.1|//PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 isoform X3 [Solanum lycopersicum];gi|723720810|ref|XP_010324745.1|//PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 isoform X1 [Solanum lycopersicum]
Solyc11g012160.2.1	1893	1341.04350392727	637.059394444237	-1.07385625005392	4.375123222743e-05	Down	7.06627736847526e-06	NA	GO:0016823//hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances	GO:0006520//cellular amino acid metabolic process	K01555//fumarylacetoacetase [EC:3.7.1.2]	gi|460409666|ref|XP_004250259.1|//PREDICTED: fumarylacetoacetase-like [Solanum lycopersicum]
Solyc03g113255.1.1	3949	115.667031777499	22.7598774912472	-2.34541301881766	0.00183234649644351	Down	0.000433840202229356	NA	NA	NA	K01213//galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67];K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460380892|ref|XP_004236187.1|//PREDICTED: uncharacterized protein LOC101245045 [Solanum lycopersicum];gi|970019383|ref|XP_015070893.1|//PREDICTED: protein NRT1/ PTR FAMILY 4.6 [Solanum pennellii];gi|971586122|ref|XP_015160700.1|//PREDICTED: protein NRT1/ PTR FAMILY 4.6-like isoform X2 [Solanum tuberosum]
Solyc09g098445.1.1	2894	878.268677163575	2013.54993028004	1.19700699036043	0.000348889359946463	Up	6.91588495674404e-05	GO:0033179//proton-transporting V-type ATPase, V0 domain;GO:0033176//proton-transporting V-type ATPase complex;GO:0016021//integral component of membrane	GO:0015077//monovalent inorganic cation transmembrane transporter activity;GO:0046961//proton-transporting ATPase activity, rotational mechanism	GO:0015988//energy coupled proton transmembrane transport, against electrochemical gradient;GO:0015991//ATP hydrolysis coupled proton transport	K02153//V-type H+-transporting ATPase subunit e	gi|460405037|ref|XP_004247984.1|//PREDICTED: V-type proton ATPase subunit e1-like [Solanum lycopersicum]
Solyc03g005730.3.1	2057	5625.77125178809	2262.46655714381	-1.31415442572372	1.11728260657338e-06	Down	1.32767889882062e-07	NA	GO:0016836//hydro-lyase activity;GO:0003861//3-isopropylmalate dehydratase activity;GO:0051539//4 iron, 4 sulfur cluster binding;GO:0051536//iron-sulfur cluster binding	GO:0008652//cellular amino acid biosynthetic process;GO:0006520//cellular amino acid metabolic process	K01703//3-isopropylmalate/(R)-2-methylmalate dehydratase large subunit [EC:4.2.1.33 4.2.1.35]	gi|565379310|ref|XP_006356071.1|//PREDICTED: 3-isopropylmalate dehydratase large subunit-like [Solanum tuberosum];gi|460376534|ref|XP_004234053.1|//PREDICTED: 3-isopropylmalate dehydratase large subunit [Solanum lycopersicum]
Solyc06g005330.3.1	1000	66.6892356646319	5.17554829777875	-3.68767029924855	8.39791269896271e-05	Down	1.44180654135315e-05	NA	NA	NA	K09422//myb proto-oncogene protein, plant	gi|970032485|ref|XP_015077549.1|//PREDICTED: transcription factor MYB48-like [Solanum pennellii]
Solyc01g014840.3.1	4720	142.819425932089	1280.15274530251	3.16405183051829	5.93402853740656e-06	Up	8.06008647320318e-07	NA	NA	NA	K03283//heat shock 70kDa protein 1/8;K19613//leucine-rich repeat protein SHOC2	gi|460365849|ref|XP_004228809.1|//PREDICTED: TMV resistance protein N-like [Solanum lycopersicum]
Solyc01g086640.2.1	2162	145.477989893641	1479.87132821996	3.34659893985675	6.02023611861477e-12	Up	3.00922045439929e-13	NA	NA	NA	NA	gi|460367463|ref|XP_004229593.1|//PREDICTED: uncharacterized protein At1g04910-like [Solanum lycopersicum]
Solyc06g084050.3.1	504	20.3144190639174	0.876336496487162	-4.53487535428628	0.00510741735043716	Down	0.00136690236231321	GO:0009534//chloroplast thylakoid;GO:0034357//photosynthetic membrane	NA	NA	K02721//photosystem II PsbW protein	gi|460393506|ref|XP_004242350.1|//PREDICTED: photosystem II reaction center W protein, chloroplastic-like [Solanum lycopersicum]
Solyc06g074905.1.1	3744	920.264458144386	153.717314071984	-2.5817688374797	6.68631351995264e-07	Down	7.53668260188489e-08	NA	NA	NA	NA	gi|723707479|ref|XP_010322412.1|//PREDICTED: uncharacterized protein LOC101267317 [Solanum lycopersicum]
BGI_novel_G000425	3317	20.086385551415	207.973849951913	3.3721122528486	1.44947028571174e-10	Up	8.96244115380878e-12	NA	NA	NA	NA	gi|460400215|ref|XP_004245631.1|//PREDICTED: uncharacterized protein LOC101265850 [Solanum lycopersicum]
Solyc12g021365.1.1	674	1365.77886782593	239.101708099018	-2.51402757537572	0.000412003633871696	Down	8.31593736922333e-05	NA	GO:0003676//nucleic acid binding;GO:0016788//hydrolase activity, acting on ester bonds	GO:0006281//DNA repair	K06195//ApaG protein	gi|460413284|ref|XP_004252020.1|//PREDICTED: uncharacterized protein LOC101252057 isoform X1 [Solanum lycopersicum]
Solyc02g083360.1.1	381	119.957125216052	1952.51315919493	4.02474151309309	5.71812993451145e-17	Up	1.46427436447345e-18	NA	NA	NA	NA	gi|460373438|ref|XP_004232526.1|//PREDICTED: uncharacterized protein LOC101245715 [Solanum lycopersicum]
Solyc10g084020.1.1	396	6.73180050012166	53.0069661678307	2.97711764339929	3.26200147504178e-06	Up	4.22523301243856e-07	NA	NA	NA	K14488//SAUR family protein	gi|460408731|ref|XP_004249795.1|//PREDICTED: auxin-induced protein X15-like [Solanum lycopersicum]
Solyc09g065430.3.1	745	86.9110191225904	0.706040085361344	-6.94364519761063	1.74296584459387e-07	Down	1.77298113534243e-08	NA	NA	NA	NA	gi|723730486|ref|XP_010326386.1|//PREDICTED: protein YLS3 [Solanum lycopersicum]
Solyc03g121660.3.1	4318	1745.74335457218	5622.70131080964	1.68742192915253	0.000148420112775949	Up	2.70694145307949e-05	NA	GO:0046872//metal ion binding;GO:0003676//nucleic acid binding	NA	K14794//ribosomal RNA-processing protein 12;K12309//beta-galactosidase [EC:3.2.1.23]	gi|460379682|ref|XP_004235590.1|//PREDICTED: zinc finger protein NUTCRACKER-like [Solanum lycopersicum]
Solyc05g010120.3.1	5937	688.128100762373	2339.32826333971	1.76534525558144	7.38913813704598e-06	Up	1.02568773007154e-06	NA	NA	NA	K01530//phospholipid-translocating ATPase [EC:3.6.3.1]	gi|460386593|ref|XP_004238982.1|//PREDICTED: putative phospholipid-transporting ATPase 9 [Solanum lycopersicum]
Solyc06g007850.3.1	3512	225.1202487292	101.170541055914	-1.15390656195414	0.000302050122801892	Down	5.90972526683737e-05	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial	gi|970033692|ref|XP_015078147.1|//PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At4g31850, chloroplastic-like [Solanum pennellii];gi|723704038|ref|XP_010321794.1|//PREDICTED: putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial isoform X1 [Solanum lycopersicum]
Solyc12g011450.2.1	1579	51575.6435777334	1649.0529283468	-4.96698030897208	3.37919134754964e-14	Down	1.23060606327568e-15	GO:0009521//photosystem;GO:0010287//plastoglobule;GO:0009535//chloroplast thylakoid membrane;GO:0009523//photosystem II;GO:0009534//chloroplast thylakoid;GO:0031224//intrinsic component of membrane;GO:0016021//integral component of membrane;GO:0009941//chloroplast envelope;GO:0009522//photosystem I	GO:0043169//cation binding;GO:0031409//pigment binding;GO:0046872//metal ion binding;GO:0046906//tetrapyrrole binding;GO:0016168//chlorophyll binding	GO:0009768//photosynthesis, light harvesting in photosystem I;GO:0006464//cellular protein modification process;GO:0006091//generation of precursor metabolites and energy;GO:0009416//response to light stimulus;GO:0018298//protein-chromophore linkage	K08914//light-harvesting complex II chlorophyll a/b binding protein 3	gi|970067934|ref|XP_015061082.1|//PREDICTED: chlorophyll a-b binding protein 13, chloroplastic [Solanum pennellii];gi|823270899|ref|NP_001296244.1|//chlorophyll a-b binding protein 13, chloroplastic [Solanum lycopersicum]
Solyc05g025590.3.1	3800	11511.1641812326	1528.58797708982	-2.91276225447359	3.40995919697966e-10	Down	2.24720734317133e-11	GO:0043231//intracellular membrane-bounded organelle	GO:0003676//nucleic acid binding	GO:0006259//DNA metabolic process	K07466//replication factor A1	gi|460387288|ref|XP_004239312.1|//PREDICTED: replication protein A 70 kDa DNA-binding subunit A [Solanum lycopersicum]
Solyc01g006210.3.1	1239	38.5090447852155	14.7938808672641	-1.38019677445125	0.0459131709419912	Down	0.0169273584981078	NA	NA	NA	NA	gi|460365536|ref|XP_004228657.1|//PREDICTED: non-structural maintenance of chromosomes element 1 homolog [Solanum lycopersicum]
Solyc09g082300.3.1	1211	33.5219471481321	1.61311301299473	-4.37718653068591	0.000127210844421249	Down	2.28124113802978e-05	NA	NA	NA	NA	gi|723731924|ref|XP_010326675.1|//PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Solanum lycopersicum]
Solyc06g048960.3.1	1702	427.434596902524	180.906448162478	-1.24045985386545	6.2605753025704e-05	Down	1.04918542419698e-05	NA	NA	NA	K11592//endoribonuclease Dicer [EC:3.1.26.-]	gi|971571016|ref|XP_015169590.1|//PREDICTED: endoribonuclease Dicer homolog 2-like isoform X1 [Solanum tuberosum];gi|970036731|ref|XP_015079707.1|//PREDICTED: endoribonuclease Dicer homolog 2-like [Solanum pennellii]
Solyc09g007470.1.1	825	167.473108660365	7.38755321252518	-4.50268903177022	3.822717666308e-07	Down	4.13648031358735e-08	NA	NA	NA	NA	gi|723728421|ref|XP_010326008.1|//PREDICTED: uncharacterized protein LOC104649089 [Solanum lycopersicum]
Solyc07g063600.3.1	1058	25819.2513963025	543.947685992907	-5.56883545412777	8.79831418857507e-13	Down	3.89461818359083e-14	GO:0031224//intrinsic component of membrane;GO:0009521//photosystem;GO:0009534//chloroplast thylakoid	GO:0043169//cation binding;GO:0046906//tetrapyrrole binding	GO:0006464//cellular protein modification process;GO:0006091//generation of precursor metabolites and energy	K08914//light-harvesting complex II chlorophyll a/b binding protein 3	gi|460397262|ref|XP_004244187.1|//PREDICTED: chlorophyll a-b binding protein 13, chloroplastic-like [Solanum lycopersicum]
Solyc11g006680.2.1	3310	2199.42462285401	619.792455083866	-1.82726906126554	2.00944324758245e-10	Down	1.27256749576658e-11	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial	gi|723740773|ref|XP_004250470.2|//PREDICTED: pentatricopeptide repeat-containing protein At5g04810, chloroplastic isoform X1 [Solanum lycopersicum]
Solyc06g065825.1.1	2232	952.094856821488	233.528115082022	-2.027509065458	0.000129991200515211	Down	2.33449233667171e-05	NA	NA	NA	NA	gi|723709524|ref|XP_010322726.1|//PREDICTED: uncharacterized protein LOC101267126 [Solanum lycopersicum]
Solyc06g051350.3.1	1942	98.4025336823387	30.6561570275653	-1.68251860675215	0.00366418943553828	Down	0.000944456163215565	NA	NA	NA	K16573//gamma-tubulin complex component 6	gi|460390630|ref|XP_004240931.1|//PREDICTED: protein ESKIMO 1-like [Solanum lycopersicum]
Solyc08g080720.2.1	648	351.293139407237	93.7955634046925	-1.90508381267809	0.000177805305773941	Down	3.30584786491881e-05	NA	NA	NA	K00962//polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]	gi|460400203|ref|XP_004245625.1|//PREDICTED: selenoprotein H-like [Solanum lycopersicum]
Solyc08g082135.1.1	1162	93.5061885064808	386.126849522949	2.04594112133773	0.0280279111662883	Up	0.00952267818252264	NA	NA	NA	K07020//uncharacterized protein	gi|460401170|ref|XP_004246101.1|//PREDICTED: KAT8 regulatory NSL complex subunit 3 [Solanum lycopersicum]
Solyc11g006410.2.1	3090	200.120239057817	671.085544031825	1.74562959926712	0.0223087643433439	Up	0.00730930515051413	NA	NA	NA	NA	gi|723740695|ref|XP_010312504.1|//PREDICTED: uncharacterized protein LOC101257721 [Solanum lycopersicum]
Solyc03g097440.3.1	1392	2.42707418313827	14.0552312576511	2.53381708126532	0.0249164567319326	Up	0.00831879763485614	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K11165//dehydrogenase/reductase SDR family member 7 [EC:1.1.-.-]	gi|460379156|ref|XP_004235330.1|//PREDICTED: 11-beta-hydroxysteroid dehydrogenase 1B-like [Solanum lycopersicum]
Solyc06g076060.1.1	285	2.02558784848228	48.0011034297599	4.56665501002093	5.44577942414574e-06	Up	7.34698733518652e-07	NA	NA	NA	NA	gi|697098598|ref|XP_009627510.1|//PREDICTED: uncharacterized protein LOC104118042 [Nicotiana tomentosiformis]
Solyc10g076460.2.1	1429	2.315193299696	146.523342111106	5.98385405158802	1.48037410115184e-13	Up	5.84358197823096e-15	NA	NA	NA	K06236//collagen, type I, alpha;K14491//two-component response regulator ARR-B family	gi|460408567|ref|XP_004249715.1|//PREDICTED: uncharacterized protein LOC101244920 [Solanum lycopersicum]
Solyc10g074960.2.1	1964	363.312861977889	131.870225249361	-1.4620935831175	8.37556340971614e-05	Down	1.43765727977273e-05	NA	NA	NA	NA	gi|460407184|ref|XP_004249034.1|//PREDICTED: transmembrane protein 87B-like [Solanum lycopersicum]
Solyc08g005930.1.1	1161	184.131613235119	52.5950783559131	-1.80773763262325	6.44192556667658e-05	Down	1.08197840328927e-05	NA	NA	NA	NA	gi|723719476|ref|XP_010324510.1|//PREDICTED: F-box/kelch-repeat protein SKIP25 [Solanum lycopersicum]
Solyc12g011320.2.1	959	32.3179787012141	178.68871229325	2.46703962872425	5.53230215395163e-07	Up	6.14310724490156e-08	NA	GO:0016740//transferase activity	NA	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|460412890|ref|XP_004251829.1|//PREDICTED: glutathione S-transferase U25-like [Solanum lycopersicum]
Solyc02g063544.1.1	390	0.497086056438005	8.19617077300803	4.04338250373303	0.0143368257693439	Up	0.00439275040345932	NA	GO:0016846//carbon-sulfur lyase activity;GO:0048037//cofactor binding;GO:0016740//transferase activity	GO:0008652//cellular amino acid biosynthetic process	K01762//1-aminocyclopropane-1-carboxylate synthase [EC:4.4.1.14]	gi|350538503|ref|NP_001234346.1|//1-aminocyclopropane-1-carboxylate synthase [Solanum lycopersicum]
Solyc11g013270.2.1	2826	254.972963202219	31.0368222631029	-3.03829151645404	0.000168586190569402	Down	3.12250179267689e-05	NA	NA	NA	K13506//glycerol-3-phosphate O-acyltransferase 3/4 [EC:2.3.1.15]	gi|460409828|ref|XP_004250340.1|//PREDICTED: uncharacterized protein At1g04910-like [Solanum lycopersicum]
Solyc07g020800.3.1	1146	313.387623835895	60.6694322107406	-2.36890649192391	0.00185946679688118	Down	0.000440954516242659	GO:0044464//cell part	GO:0032561//guanyl ribonucleotide binding	GO:0035556//intracellular signal transduction	K04392//Ras-related C3 botulinum toxin substrate 1	gi|723713600|ref|XP_010323415.1|//PREDICTED: rac-like GTP-binding protein ARAC7 isoform X1 [Solanum lycopersicum]
Solyc09g090350.3.1	2465	129.968107376066	53.2009948000874	-1.2886325186193	0.00438917096767108	Down	0.00115602661613105	NA	NA	NA	K17756//long-chain-alcohol oxidase [EC:1.1.3.20]	gi|460404552|ref|XP_004247745.1|//PREDICTED: long-chain-alcohol oxidase FAO1 [Solanum lycopersicum]
Solyc02g072000.3.1	2380	242.179688608864	1202.95667663553	2.31243490843898	1.69816483429385e-05	Up	2.52813118688298e-06	GO:0043231//intracellular membrane-bounded organelle	GO:0003677//DNA binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0050896//response to stimulus;GO:0006351//transcription, DNA-templated	K09419//heat shock transcription factor, other eukaryote	gi|460374503|ref|XP_004233050.1|//PREDICTED: heat stress transcription factor A-4c [Solanum lycopersicum]
Solyc02g090220.3.1	777	20.3897172575457	105.851856509806	2.37613289776475	3.96009806891005e-05	Up	6.35611386787188e-06	NA	NA	NA	K16222//Dof zinc finger protein DOF5.5	gi|460372500|ref|XP_004232067.1|//PREDICTED: dof zinc finger protein DOF3.4 [Solanum lycopersicum]
Solyc01g103700.3.1	3025	1256.65678056944	599.814622492392	-1.06700207488394	0.0468080872406032	Down	0.0173288326551987	NA	NA	NA	K14962//COMPASS component SWD2;K09571//FK506-binding protein 4/5 [EC:5.2.1.8]	gi|460369222|ref|XP_004230462.1|//PREDICTED: nifU-like protein 2, chloroplastic [Solanum lycopersicum];gi|460370995|ref|XP_004231332.1|//PREDICTED: WEB family protein At1g75720 [Solanum lycopersicum]
Solyc06g066640.3.1	787	11850.0571108392	2988.14051300949	-1.9875741166528	5.98676274393056e-05	Down	9.99058327291527e-06	GO:0009522//photosystem I	NA	GO:0044237//cellular metabolic process	K02695//photosystem I subunit VI	gi|460392258|ref|XP_004241734.1|//PREDICTED: photosystem I reaction center subunit VI-1, chloroplastic-like [Solanum lycopersicum]
Solyc04g078840.3.1	3193	678.754477160539	6240.10985775028	3.20060971381819	2.66290302432838e-09	Up	2.01529665446163e-10	GO:0043231//intracellular membrane-bounded organelle	GO:0003677//DNA binding;GO:0005515//protein binding;GO:0043565//sequence-specific DNA binding;GO:0003700//transcription factor activity, sequence-specific DNA binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0009738//abscisic acid-activated signaling pathway;GO:0009414//response to water deprivation;GO:0006355//regulation of transcription, DNA-templated;GO:0009651//response to salt stress;GO:0006351//transcription, DNA-templated	K14432//ABA responsive element binding factor	gi|350538377|ref|NP_001234596.1|//AREB-like protein [Solanum lycopersicum]
Solyc01g008250.3.1	1009	2895.86579369378	257.162618241442	-3.493241894061	1.34841805564641e-18	Down	2.88501552087758e-20	NA	NA	NA	K03671//thioredoxin 1	gi|460365282|ref|XP_004228532.1|//PREDICTED: thioredoxin X, chloroplastic [Solanum lycopersicum]
Solyc01g079880.3.1	1227	15590.3600335379	2851.2544568873	-2.45098554329768	3.05450668554862e-09	Down	2.32264560851319e-10	NA	NA	NA	K01953//asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4];K13783//MFS transporter, OPA family, solute carrier family 37 (glycerol-3-phosphate transporter), member 1/2	gi|460367130|ref|XP_004229428.1|//PREDICTED: stem-specific protein TSJT1 [Solanum lycopersicum]
Solyc03g095710.3.1	1298	203.160283956396	449.705209340146	1.14636120062031	0.0153018030673153	Up	0.00473461559794932	NA	GO:0046872//metal ion binding;GO:0016160//amylase activity	GO:0044238//primary metabolic process	K01176//alpha-amylase [EC:3.2.1.1]	gi|460378943|ref|XP_004235226.1|//PREDICTED: alpha-amylase [Solanum lycopersicum]
Solyc01g104650.3.1	2458	471.519813680883	1701.71616663962	1.85160012587748	8.30449538508605e-09	Up	6.75738535322903e-10	NA	NA	NA	K14432//ABA responsive element binding factor	gi|460369486|ref|XP_004230593.1|//PREDICTED: G-box-binding factor 4-like isoform X1 [Solanum lycopersicum]
Solyc09g011350.2.1	657	1.85826910924898	12.2263843411927	2.71796647565662	0.042000016282022	Up	0.0152325987186549	NA	NA	NA	NA	gi|460402723|ref|XP_004246860.1|//PREDICTED: protein MIZU-KUSSEI 1 [Solanum lycopersicum]
Solyc02g080110.3.1	1728	158.863745872747	376.629225461091	1.24535502738751	0.0108480880962913	Up	0.00320331571115326	GO:0016021//integral component of membrane	NA	NA	NA	gi|723674018|ref|XP_010316617.1|//PREDICTED: uncharacterized protein LOC101263370 isoform X1 [Solanum lycopersicum];gi|460373897|ref|XP_004232749.1|//PREDICTED: uncharacterized protein LOC101263370 isoform X2 [Solanum lycopersicum]
Solyc01g100270.3.1	2936	549.344052234988	159.884352222862	-1.7806812369859	3.56414920169336e-05	Down	5.67941622082865e-06	NA	GO:0004527//exonuclease activity	NA	K09122//uncharacterized protein	gi|723663074|ref|XP_010313383.1|//PREDICTED: uncharacterized protein LOC101268229 isoform X1 [Solanum lycopersicum]
Solyc01g107620.3.1	1858	318.93634578472	874.771612094782	1.45563788753285	1.04602227923617e-07	Up	1.02259085173317e-08	GO:0043231//intracellular membrane-bounded organelle;GO:0016021//integral component of membrane;GO:0005789//endoplasmic reticulum membrane	NA	NA	K20721;K07748//sterol-4alpha-carboxylate 3-dehydrogenase (decarboxylating) [EC:1.1.1.170];K20723//null	gi|460369786|ref|XP_004230738.1|//PREDICTED: reticulon-like protein B11 [Solanum lycopersicum]
Solyc03g113080.3.1	1095	69.7930135352615	241.867083681593	1.79305991137227	0.000132744556985665	Up	2.3898770323571e-05	NA	NA	NA	K05643//ATP-binding cassette, subfamily A (ABC1), member 3;K05641//ATP-binding cassette, subfamily A (ABC1), member 1	gi|723687689|ref|XP_010318970.1|//PREDICTED: LOW QUALITY PROTEIN: ABC transporter A family member 2 [Solanum lycopersicum]
Solyc11g071920.2.1	3849	1167.06706559326	2354.34495394936	1.01243824867492	0.00149570133745237	Up	0.000346161085591239	NA	GO:0016787//hydrolase activity;GO:0046914//transition metal ion binding	NA	K01090//protein phosphatase [EC:3.1.3.16]	gi|723746243|ref|XP_010313488.1|//PREDICTED: serine/threonine-protein phosphatase BSL3-like isoform X2 [Solanum lycopersicum];gi|460411661|ref|XP_004251224.1|//PREDICTED: serine/threonine-protein phosphatase BSL3-like isoform X1 [Solanum lycopersicum]
Solyc09g072750.2.1	846	6653.38194290507	1513.53485132805	-2.13616595951498	0.0108888239800775	Down	0.00321696805077137	NA	NA	NA	NA	gi|971570433|ref|XP_015169421.1|//PREDICTED: tetra-peptide repeat homeobox protein 1-like isoform X1 [Solanum tuberosum]
Solyc02g081470.3.1	747	129.842662976533	1130.3304123856	3.12190815648318	3.41938393229757e-07	Up	3.66945219214429e-08	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|970009656|ref|XP_015065718.1|//PREDICTED: putative cysteine-rich receptor-like protein kinase 43 isoform X1 [Solanum pennellii]
Solyc02g070890.3.1	4073	241.949661526971	4815.08589379307	4.31478270769367	5.79553501691399e-17	Up	1.48841644052995e-18	NA	NA	NA	K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|460374588|ref|XP_004233092.1|//PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2 [Solanum lycopersicum]
Solyc07g052490.3.1	1141	97.4478156495173	0.556516857193655	-7.45206064852229	2.15448057024658e-09	Down	1.60614326095615e-10	NA	NA	NA	K09422//myb proto-oncogene protein, plant	gi|723715686|ref|XP_010323811.1|//PREDICTED: trichome differentiation protein GL1-like isoform X1 [Solanum lycopersicum]
Solyc02g063270.3.1	1921	851.078486480742	2108.77628293844	1.30904196126079	0.0232253706013729	Up	0.00766156738564747	NA	NA	NA	K03327//multidrug resistance protein, MATE family	gi|460375382|ref|XP_004233485.1|//PREDICTED: MATE efflux family protein 5 [Solanum lycopersicum];gi|971549797|ref|XP_015164062.1|//PREDICTED: protein DETOXIFICATION 9-like [Solanum tuberosum]
Solyc04g005240.2.1	1016	0.387768833383003	9.46067257292446	4.60867399276151	0.00260472548619935	Up	0.000642249108812013	NA	NA	NA	NA	gi|697147407|ref|XP_009627862.1|//PREDICTED: root meristem growth factor 1-like [Nicotiana tomentosiformis]
Solyc11g042620.2.1	1099	1077.37203645834	323.035354051535	-1.73775255319391	6.12607310430782e-08	Down	5.76117580220987e-09	NA	NA	NA	NA	gi|723743870|ref|XP_010313059.1|//PREDICTED: uncharacterized protein LOC101266993 isoform X2 [Solanum lycopersicum];gi|460410607|ref|XP_004250716.1|//PREDICTED: uncharacterized protein LOC101266993 isoform X1 [Solanum lycopersicum]
Solyc06g050950.3.1	2175	2.1542748457999	135.743941872132	5.97754168013712	6.06110813953372e-17	Up	1.56560730733595e-18	NA	NA	NA	K13944	gi|723706055|ref|XP_010322163.1|//PREDICTED: LOB domain-containing protein 12-like [Solanum lycopersicum]
Solyc06g005460.1.1	561	0.395203568676658	18.6369414082713	5.55942532758839	6.57960682841869e-05	Up	1.10657469844286e-05	NA	NA	NA	NA	gi|970033665|ref|XP_015078132.1|//PREDICTED: uncharacterized protein LOC107021931, partial [Solanum pennellii]
Solyc09g091590.3.1	2081	377.562925396351	68.404473214347	-2.46455453061036	2.06703720537038e-12	Down	9.64637908574517e-14	NA	NA	NA	K14525//ribonucleases P/MRP protein subunit RPP25 [EC:3.1.26.5]	gi|565389187|ref|XP_006360341.1|//PREDICTED: protein argonaute 18-like isoform X1 [Solanum tuberosum];gi|460404736|ref|XP_004247837.1|//PREDICTED: protein argonaute 18-like isoform X2 [Solanum lycopersicum]
Solyc02g092910.3.1	1577	445.82125651823	928.605240898988	1.05860001810408	0.000257815809743406	Up	4.96450153993751e-05	GO:0043231//intracellular membrane-bounded organelle;GO:0044427//chromosomal part	GO:0005488//binding	GO:0006325//chromatin organization	K11339//mortality factor 4-like protein 1	gi|808163410|ref|NP_001294924.1|//nuA4 complex subunit EAF3 homolog isoform 1 [Solanum lycopersicum]
Solyc01g068450.3.1	4539	556.352840708177	1371.00731861845	1.3011642324166	0.00016887358205871	Up	3.12864266421078e-05	NA	NA	NA	K20478//golgin subfamily B member 1	gi|460366578|ref|XP_004229158.1|//PREDICTED: midasin [Solanum lycopersicum]
Solyc10g086470.2.1	928	328.265131251571	79.0875113103727	-2.05333971093513	2.63837673800066e-08	Down	2.31108742146323e-09	NA	NA	NA	NA	gi|460408464|ref|XP_004249665.1|//PREDICTED: uncharacterized protein LOC101248732 isoform X2 [Solanum lycopersicum]
Solyc01g079780.3.1	2267	621.412382492165	1554.30681923534	1.32264842446293	0.012849053749482	Up	0.00387655587626016	NA	NA	NA	NA	gi|460367112|ref|XP_004229419.1|//PREDICTED: uncharacterized GPI-anchored protein At5g19250-like [Solanum lycopersicum]
Solyc09g011210.3.1	1569	425.466714765959	131.402161136315	-1.6950572675176	7.85936283678682e-08	Down	7.54022270729595e-09	NA	NA	NA	K13195//cold-inducible RNA-binding protein	gi|460401893|ref|XP_004246450.1|//PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial isoform X1 [Solanum lycopersicum]
Solyc07g065980.3.1	3204	868.228851368414	233.365529686392	-1.89548388737892	6.05251094286586e-07	Down	6.77038368105727e-08	NA	GO:0003824//catalytic activity;GO:0008378//galactosyltransferase activity	NA	K06617//raffinose synthase [EC:2.4.1.82]	gi|698459109|ref|XP_009781221.1|//PREDICTED: probable galactinol--sucrose galactosyltransferase 1 [Nicotiana sylvestris];gi|927442665|ref|NP_001234763.2|//alkaline alpha-galactosidase seed imbibition protein [Solanum lycopersicum]
Solyc01g065710.3.1	891	159.550156963683	68.0714668202689	-1.22888792520815	0.042000016282022	Down	0.0152325022618516	GO:1990879//CST complex	GO:0003697//single-stranded DNA binding;GO:0010521//telomerase inhibitor activity	GO:0019827//stem cell population maintenance;GO:0051974//negative regulation of telomerase activity;GO:0048367//shoot system development;GO:0000723//telomere maintenance	NA	gi|460366818|ref|XP_004229275.1|//PREDICTED: uncharacterized protein LOC101265674 [Solanum lycopersicum]
Solyc06g050430.3.1	1187	48.3445518441787	188.774503529765	1.96523870253263	1.29240332575817e-06	Up	1.55022882894356e-07	NA	NA	NA	K13944	gi|460390530|ref|XP_004240882.1|//PREDICTED: LOB domain-containing protein 15 [Solanum lycopersicum]
Solyc04g048900.3.1	2081	3282.42663043251	72507.1495951165	4.46528859050166	1.55969325801989e-17	Up	3.80214473961909e-19	NA	NA	NA	K08057//calreticulin	gi|460383697|ref|XP_004237555.1|//PREDICTED: calreticulin-3-like [Solanum lycopersicum]
Solyc01g058190.3.1	1155	2185.00130797817	1082.23973019121	-1.01361403304663	0.000925239773809158	Down	0.000204271476825393	GO:0030529//intracellular ribonucleoprotein complex	GO:0003723//RNA binding;GO:0005198//structural molecule activity	GO:0010467//gene expression	NA	gi|460366306|ref|XP_004229029.1|//PREDICTED: uncharacterized protein LOC101245198 [Solanum lycopersicum]
Solyc10g076220.2.1	2797	0.468338703590561	38.4471091059714	6.35917904617388	1.54995500721558e-06	Up	1.89093586499799e-07	NA	NA	NA	K00430//peroxidase [EC:1.11.1.7]	gi|460407204|ref|XP_004249044.1|//PREDICTED: peroxidase 2-like [Solanum lycopersicum];gi|661889686|emb|CDP06406.1|//unnamed protein product [Coffea canephora]
Solyc02g062100.3.1	1772	389.349160687642	1290.46138646346	1.72875055197003	8.1538400579022e-05	Up	1.39473579937801e-05	NA	NA	NA	K19366//spartin	gi|723677870|ref|XP_010317246.1|//PREDICTED: uncharacterized protein LOC101253155 [Solanum lycopersicum]
Solyc05g012700.3.1	1673	2997.51744365005	545.72858283857	-2.45751263647529	8.39921275852721e-17	Down	2.20405761965229e-18	NA	NA	NA	NA	gi|460386802|ref|XP_004239085.1|//PREDICTED: uncharacterized protein LOC101252876 [Solanum lycopersicum]
Solyc06g073280.3.1	1556	3218.69536387893	1193.42387266067	-1.43136949694341	0.000598682362089485	Down	0.000126154938550185	NA	NA	NA	K10206//LL-diaminopimelate aminotransferase [EC:2.6.1.83]	gi|460391601|ref|XP_004241409.1|//PREDICTED: LL-diaminopimelate aminotransferase, chloroplastic [Solanum lycopersicum]
Solyc10g086600.2.1	1570	31.2152667517072	69.5552279223762	1.15590716046979	0.0399867067416399	Up	0.014363795022707	NA	NA	NA	K12663//Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase [EC:5.3.3.-]	gi|723739982|ref|XP_004249838.2|//PREDICTED: subtilisin-like protease SBT5.3 [Solanum lycopersicum]
Solyc10g005470.3.1	691	702.031592274155	131.281766543411	-2.4188693978447	6.52883511282539e-08	Down	6.17158410844087e-09	NA	NA	NA	NA	gi|723735024|ref|XP_010327230.1|//PREDICTED: uncharacterized protein LOC104649495 [Solanum lycopersicum]
Solyc04g077750.2.1	3524	56.087170281174	232.241328849802	2.04988202909493	4.86264833847013e-05	Up	7.92436951535388e-06	NA	NA	NA	K03549//KUP system potassium uptake protein;K12447//UDP-sugar pyrophosphorylase [EC:2.7.7.64];K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|697102004|ref|XP_009598759.1|//PREDICTED: uncharacterized protein LOC104094510 [Nicotiana tomentosiformis]
Solyc07g064290.3.1	1439	423.248515366056	1825.52049981804	2.10873095703132	1.9700514237163e-09	Up	1.46057562314437e-10	NA	NA	NA	K07976//Rab family, other	gi|460397168|ref|XP_004244140.1|//PREDICTED: septum-promoting GTP-binding protein 1 [Solanum lycopersicum]
Solyc09g061730.2.1	1987	94.8075043324293	4.30886671963889	-4.45962087849001	4.14242828842352e-09	Down	3.23019232867974e-10	NA	NA	NA	NA	gi|723730119|ref|XP_004247099.2|//PREDICTED: uncharacterized protein LOC101261061 [Solanum lycopersicum]
Solyc08g063080.3.1	2688	5034.98672727946	2104.61489676592	-1.25843170259737	0.00185377950973694	Down	0.000439467633887242	GO:0009536//plastid	GO:0046508//hydrolase activity, acting on carbon-sulfur bonds;GO:0048037//cofactor binding	GO:0008152//metabolic process	K06118//UDP-sulfoquinovose synthase [EC:3.13.1.1]	gi|350536877|ref|NP_001234269.1|//UDP-sulfoquinovose synthase [Solanum lycopersicum]
Solyc07g008310.3.1	1625	328.402480205614	121.499596205914	-1.43451350371473	0.00728848834576259	Down	0.00205032881860259	NA	GO:0046872//metal ion binding;GO:0051536//iron-sulfur cluster binding	GO:0008152//metabolic process	K00499//choline monooxygenase [EC:1.14.15.7]	gi|460394388|ref|XP_004242785.1|//PREDICTED: choline monooxygenase, chloroplastic-like isoform X2 [Solanum lycopersicum]
Solyc11g012860.2.1	2822	725.592169885687	124.339915294711	-2.54486938616559	2.07171964779013e-06	Down	2.58308566492395e-07	NA	NA	NA	K10352//myosin heavy chain;K12472//epidermal growth factor receptor substrate 15;K20478//golgin subfamily B member 1	gi|820867046|ref|NP_001295482.1|//filament-like plant protein [Solanum lycopersicum];gi|723742318|ref|XP_010312767.1|//PREDICTED: filament-like plant protein isoform X1 [Solanum lycopersicum]
Solyc08g013910.3.1	2074	17.2725861675386	1.46236081472114	-3.5621128862024	0.00226613970440241	Down	0.000548289578845834	NA	NA	NA	NA	gi|723720888|ref|XP_004244744.2|//PREDICTED: uncharacterized protein LOC101247045 [Solanum lycopersicum]
Solyc12g088250.2.1	1642	598.413984344196	88.2257349176985	-2.76187244220503	3.91523988805901e-08	Down	3.54484780382262e-09	NA	NA	NA	K16296//serine carboxypeptidase-like clade I [EC:3.4.16.-]	gi|723752276|ref|XP_010314600.1|//PREDICTED: serine carboxypeptidase-like 11 [Solanum lycopersicum]
Solyc01g108560.4.1	1014	49.3461308063389	14.3830540792049	-1.77856692014871	0.0189314620385269	Down	0.00603551494019385	NA	NA	NA	K13258//2-hydroxyisoflavanone dehydratase [EC:4.2.1.105];K20506//tuliposide A-converting enzyme [EC:4.2.99.22]	gi|460369937|ref|XP_004230813.1|//PREDICTED: 2-hydroxyisoflavanone dehydratase-like [Solanum lycopersicum]
Solyc10g084370.2.1	3770	2333.45959269065	488.705108758773	-2.2554343938921	2.03482516839297e-15	Down	6.24979848947298e-17	GO:0005840//ribosome	GO:0003735//structural constituent of ribosome	GO:0006412//translation	K12133//MYB-related transcription factor LHY;K02930//large subunit ribosomal protein L4e	gi|460408147|ref|XP_004249508.1|//PREDICTED: protein REVEILLE 8-like [Solanum lycopersicum];gi|697093550|ref|XP_009614392.1|//PREDICTED: 60S ribosomal protein L4-1-like [Nicotiana tomentosiformis]
Solyc04g076700.3.1	1147	42.5871381070197	119.440012993894	1.48779653964807	0.00213686778571587	Up	0.000514065330587827	NA	NA	NA	K09264//MADS-box transcription factor, plant;K09260//MADS-box transcription enhancer factor 2A;K04454//MADS-box transcription enhancer factor 2C	gi|723694768|ref|XP_010320235.1|//PREDICTED: MADS-box transcription factor 23-like isoform X1 [Solanum lycopersicum];gi|460384650|ref|XP_004238023.1|//PREDICTED: MADS-box transcription factor 23-like isoform X2 [Solanum lycopersicum];gi|971534146|ref|XP_015165332.1|//PREDICTED: MADS-box transcription factor 23-like isoform X1 [Solanum tuberosum]
Solyc05g049900.3.1	1701	788.172775568222	286.085966042762	-1.46206318998117	1.97055665173277e-06	Down	2.44740374369077e-07	NA	NA	NA	K08994//putative membrane protein	gi|460388905|ref|XP_004240104.1|//PREDICTED: UPF0187 protein At3g61320, chloroplastic-like [Solanum lycopersicum]
Solyc06g051980.3.1	2322	407.658251533442	1008.87998972753	1.30732244790868	0.00584536094281648	Up	0.00159708124760865	NA	GO:0005509//calcium ion binding;GO:0004721//phosphoprotein phosphatase activity	GO:0006470//protein dephosphorylation	K06268//serine/threonine-protein phosphatase 2B regulatory subunit;K04506//E3 ubiquitin-protein ligase SIAH1 [EC:2.3.2.27]	gi|970031904|ref|XP_015077249.1|//PREDICTED: E3 ubiquitin-protein ligase SINAT3 [Solanum pennellii];gi|460390683|ref|XP_004240957.1|//PREDICTED: calcineurin B-like protein 4 [Solanum lycopersicum];gi|460390685|ref|XP_004240958.1|//PREDICTED: E3 ubiquitin-protein ligase SINAT3 [Solanum lycopersicum]
Solyc03g043700.3.1	2100	60.9630387421486	1181.35261419316	4.27636102267685	6.5160500370227e-17	Up	1.69046176597875e-18	NA	NA	NA	K08332//vacuolar protein 8	gi|460377871|ref|XP_004234710.1|//PREDICTED: U-box domain-containing protein 4-like isoform X1 [Solanum lycopersicum]
Solyc11g022460.2.1	2829	768.390166454283	255.518965997259	-1.5884086763429	0.00287255206551523	Down	0.000716424849797317	NA	NA	NA	K12486//stromal membrane-associated protein;K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K18999//RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16]	gi|460410022|ref|XP_004250430.1|//PREDICTED: multiple C2 and transmembrane domain-containing protein 1-like [Solanum lycopersicum]
Solyc10g008680.2.1	1900	104.435208417158	10.3942269359729	-3.3287538043429	8.71609786981419e-08	Down	8.41785059664849e-09	NA	NA	NA	K14329//agmatine coumaroyltransferase [EC:2.3.1.64 2.3.1.-];K13264//isoflavone 7-O-glucoside-6''-O-malonyltransferase [EC:2.3.1.115]	gi|970059173|ref|XP_015056314.1|//PREDICTED: malonyl-coenzyme:anthocyanin 5-O-glucoside-6'''-O-malonyltransferase-like [Solanum pennellii]
Solyc07g042230.1.1	504	6.4591965559626	880.897928598475	7.09147632796261	1.58174049533713e-35	Up	7.42877972314291e-38	NA	NA	NA	K09286//EREBP-like factor	gi|460396256|ref|XP_004243693.1|//PREDICTED: ethylene-responsive transcription factor ERF018-like [Solanum lycopersicum]
Solyc08g061230.3.1	1258	11.9860103024877	38.7418107358391	1.69253986590363	0.0048392681309818	Up	0.00128900440077516	NA	NA	NA	NA	gi|460398999|ref|XP_004245033.1|//PREDICTED: epoxide hydrolase 4-like isoform X1 [Solanum lycopersicum]
Solyc01g057770.3.1	7120	1705.01867393574	5610.49700012676	1.71834103594113	3.01711265524667e-05	Up	4.73349752718549e-06	GO:0031224//intrinsic component of membrane;GO:0005887//integral component of plasma membrane	GO:0015301//anion:anion antiporter activity;GO:0005452//inorganic anion exchanger activity	GO:0051453//regulation of intracellular pH;GO:0006811//ion transport;GO:0098656//anion transmembrane transport;GO:0015698//inorganic anion transport	K13024//inositol-hexakisphosphate/diphosphoinositol-pentakisphosphate 1-kinase [EC:2.7.4.24];K13855//solute carrier family 4 (anion exchanger), member 2;K08247//methionine S-methyltransferase [EC:2.1.1.12];K13862//solute carrier family 4 (sodium borate transporter), member 11;K06573	gi|590662363|ref|XP_007035927.1|//HCO3- transporter family isoform 2 [Theobroma cacao];gi|460366320|ref|XP_004229035.1|//PREDICTED: boron transporter 1 isoform X2 [Solanum lycopersicum]
Solyc03g120110.3.1	2867	124.22990239434	447.949650368594	1.8503241071437	0.0271264721158842	Up	0.00917495184059688	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K01183//chitinase [EC:3.2.1.14]	gi|460381341|ref|XP_004236409.1|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase CES101 [Solanum lycopersicum];gi|970016171|ref|XP_015069179.1|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase CES101 [Solanum pennellii]
Solyc01g088150.3.1	2280	567.395630795972	1139.48960705416	1.00596081991008	0.00245283393771682	Up	0.000600225689619461	GO:0044424//intracellular part;GO:0009331//glycerol-3-phosphate dehydrogenase complex;GO:0043234//protein complex	GO:0016616//oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;GO:0000166//nucleotide binding;GO:0048037//cofactor binding;GO:0051287//NAD binding;GO:0004367//glycerol-3-phosphate dehydrogenase [NAD+] activity	GO:0006072//glycerol-3-phosphate metabolic process;GO:0046168//glycerol-3-phosphate catabolic process;GO:0005975//carbohydrate metabolic process;GO:0055114//oxidation-reduction process	K00006//glycerol-3-phosphate dehydrogenase (NAD+) [EC:1.1.1.8]	gi|460367651|ref|XP_004229685.1|//PREDICTED: probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic [Solanum lycopersicum];gi|661882531|emb|CDP13845.1|//unnamed protein product [Coffea canephora]
Solyc03g080010.3.1	3618	2047.26365477022	261.757432698096	-2.9673945016375	1.12986393056589e-20	Down	1.94571766781511e-22	NA	NA	NA	K07456//DNA mismatch repair protein MutS2	gi|723682531|ref|XP_010318067.1|//PREDICTED: uncharacterized protein LOC101255670 isoform X1 [Solanum lycopersicum];gi|723682534|ref|XP_010318068.1|//PREDICTED: uncharacterized protein LOC101255670 isoform X2 [Solanum lycopersicum]
Solyc09g072817.1.1	237	1.23872065739222	42.1242910834984	5.08772961854053	5.04131806274695e-06	Up	6.75921465323572e-07	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|970053062|ref|XP_015088161.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Solanum pennellii]
Solyc12g099880.1.1	324	0.370938303362153	4.26790197356067	3.52427588589779	0.0403985690662108	Up	0.0145418585609213	NA	NA	NA	K10406//kinesin family member C2/C3	gi|565366539|ref|XP_006349945.1|//PREDICTED: receptor-like protein 12 [Solanum tuberosum]
Solyc01g079300.3.1	1870	5.12073881692079	44.2689110768474	3.11187000510147	3.11763914767138e-05	Up	4.90864311904126e-06	NA	GO:0016757//transferase activity, transferring glycosyl groups;GO:0003824//catalytic activity	NA	K06611//stachyose synthetase [EC:2.4.1.67]	gi|225437604|ref|XP_002271259.1|//PREDICTED: stachyose synthase [Vitis vinifera];gi|297743998|emb|CBI36968.3|//unnamed protein product [Vitis vinifera]
Solyc09g075470.2.1	460	191.317240794064	23.4086858000563	-3.0308510431248	1.40258256490333e-12	Down	6.37822696131678e-14	NA	GO:0005515//protein binding	NA	K09510//DnaJ homolog subfamily B member 4;K09512//DnaJ homolog subfamily B member 6;K09514//DnaJ homolog subfamily B member 8	gi|460403838|ref|XP_004247393.1|//PREDICTED: dnaJ homolog subfamily B member 6-like [Solanum lycopersicum]
Solyc01g107980.3.1	1248	738.225152593825	288.432217709319	-1.35582857174075	0.0330402133095393	Down	0.0115236795861547	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K08332//vacuolar protein 8	gi|460369851|ref|XP_004230770.1|//PREDICTED: U-box domain-containing protein 26-like [Solanum lycopersicum]
Solyc07g049230.1.1	1346	2156.85999630256	841.374680032239	-1.35811222489299	0.00537939578818578	Down	0.00145132200368602	NA	NA	NA	K06995//uncharacterized protein	gi|460395917|ref|XP_004243526.1|//PREDICTED: uncharacterized protein LOC101246360 [Solanum lycopersicum]
Solyc12g056480.2.1	1967	33.3533455811116	152.602452341131	2.19387476015609	0.00982069750927593	Up	0.00286639718577549	NA	NA	NA	K18213//proteinaceous RNase P [EC:3.1.26.5]	gi|460414571|ref|XP_004252642.1|//PREDICTED: protein STAY-GREEN, chloroplastic-like [Solanum lycopersicum]
Solyc08g065220.3.1	3802	82298.1372877616	3149.61682325857	-4.70761154876798	7.9152865159324e-24	Down	1.00903085897155e-25	GO:0043231//intracellular membrane-bounded organelle	GO:0016642//oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor;GO:0048037//cofactor binding	GO:0006546//glycine catabolic process	K00281//glycine dehydrogenase [EC:1.4.4.2]	gi|460399143|ref|XP_004245101.1|//PREDICTED: glycine dehydrogenase (decarboxylating), mitochondrial [Solanum lycopersicum]
Solyc05g054710.3.1	2123	622.661280368505	1384.79332742324	1.15315120383588	0.00176680864830216	Up	0.000416413116267131	NA	GO:0043167//ion binding;GO:0015929//hexosaminidase activity	GO:0044238//primary metabolic process	K12373//hexosaminidase [EC:3.2.1.52]	gi|924442899|ref|NP_001234613.2|//beta-hexosaminidase 2 [Solanum lycopersicum];gi|723700828|ref|XP_010321284.1|//PREDICTED: beta-hexosaminidase 2 isoform X1 [Solanum lycopersicum]
Solyc04g079940.3.1	1651	733.714884129456	2352.58034201748	1.68095253562868	0.000424746310434174	Up	8.60372340739893e-05	NA	NA	NA	NA	gi|970021055|ref|XP_015071782.1|//PREDICTED: uncharacterized protein LOC107015875 isoform X1 [Solanum pennellii]
Solyc03g033750.1.1	426	12.5755689693834	81.0227819467604	2.68770394649403	0.001464293762934	Up	0.000338237231582749	NA	NA	NA	K08900//mitochondrial chaperone BCS1	gi|970016274|ref|XP_015069237.1|//PREDICTED: protein HYPER-SENSITIVITY-RELATED 4-like [Solanum pennellii]
Solyc12g010320.2.1	1156	1518.38445657265	467.225124536305	-1.70034736812417	2.2576142221693e-09	Down	1.6880774301743e-10	NA	NA	GO:0051234//establishment of localization	K03098//apolipoprotein D and lipocalin family protein	gi|350539735|ref|NP_001234515.1|//temperature-induced lipocalin [Solanum lycopersicum]
Solyc12g056590.2.1	1313	162.663500958239	6644.65001969464	5.35223073817093	6.43961863688835e-24	Up	8.04112212374234e-26	NA	NA	NA	K09286//EREBP-like factor	gi|460414469|ref|XP_004252593.1|//PREDICTED: ethylene-responsive transcription factor ERF110-like isoform X1 [Solanum lycopersicum]
Solyc02g078530.3.1	1897	73.1999164252453	946.911675689111	3.69331595642589	2.74612307174728e-14	Up	9.82659217562766e-16	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460374097|ref|XP_004232848.1|//PREDICTED: putative serine/threonine-protein kinase isoform X1 [Solanum lycopersicum]
Solyc01g088490.3.1	1002	14.5489932773183	39.4007160851911	1.43730252126764	0.0174018610376994	Up	0.00547521652822502	NA	NA	NA	K17710//pentatricopeptide repeat domain-containing protein 1	gi|460367685|ref|XP_004229701.1|//PREDICTED: pentatricopeptide repeat-containing protein At1g06270 [Solanum lycopersicum]
Solyc07g065640.3.1	734	824.95762463912	1918.96259557282	1.21793467091603	7.64284362360805e-05	Up	1.29849713867621e-05	NA	NA	NA	K13456//RPM1-interacting protein 4	gi|460396963|ref|XP_004244039.1|//PREDICTED: RPM1-interacting protein 4 isoform X2 [Solanum lycopersicum]
Solyc07g039570.3.1	2222	18.4979848672532	1103.06249118063	5.89800260016624	1.89541540691355e-14	Up	6.6270301613423e-16	NA	NA	NA	K13422//transcription factor MYC2	gi|723717169|ref|XP_010324053.1|//PREDICTED: putative transcription factor bHLH041 [Solanum lycopersicum]
Solyc12g056250.2.1	1081	548.360991553001	3924.30220135628	2.83923829271871	4.17170135621662e-07	Up	4.54209768208914e-08	GO:0042579//microbody	GO:0016765//transferase activity, transferring alkyl or aryl (other than methyl) groups	GO:0009404//toxin metabolic process	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|460414461|ref|XP_004252589.1|//PREDICTED: glutathione S-transferase T1 [Solanum lycopersicum]
Solyc02g069860.3.1	2178	548.122608207683	50.4605167279327	-3.44127175716547	3.07101122037194e-26	Down	3.11359419987016e-28	NA	NA	NA	K08064//nuclear transcription factor Y, alpha	gi|723675995|ref|XP_010316954.1|//PREDICTED: nuclear transcription factor Y subunit A-7 isoform X1 [Solanum lycopersicum];gi|723676006|ref|XP_010316957.1|//PREDICTED: nuclear transcription factor Y subunit A-7 isoform X4 [Solanum lycopersicum]
Solyc06g009170.3.1	1488	910.029432145353	2577.18982779837	1.50181369476775	4.65802427098731e-05	Up	7.56138948119492e-06	NA	NA	NA	K08726//soluble epoxide hydrolase / lipid-phosphate phosphatase [EC:3.3.2.10 3.1.3.76];K10144//RING finger and CHY zinc finger domain-containing protein 1 [EC:2.3.2.27]	gi|460389828|ref|XP_004240550.1|//PREDICTED: bifunctional epoxide hydrolase 2-like [Solanum lycopersicum]
Solyc03g025940.2.1	1150	37.5898525009814	314.794964441257	3.06599730372265	2.33798393079239e-06	Up	2.9412165522679e-07	NA	NA	NA	K10269//F-box and leucine-rich repeat protein 3;K10268//F-box and leucine-rich repeat protein 2/20;K10273//F-box and leucine-rich repeat protein 7	gi|460377195|ref|XP_004234380.1|//PREDICTED: F-box/LRR-repeat protein At3g48880 [Solanum lycopersicum]
Solyc08g074270.3.1	2416	792.265984657701	103.667700263379	-2.93401839874286	2.26965543310725e-18	Down	4.96603451332173e-20	GO:0009536//plastid;GO:0005739//mitochondrion;GO:0009507//chloroplast	GO:0003677//DNA binding;GO:0016830//carbon-carbon lyase activity;GO:0003676//nucleic acid binding;GO:0003913//DNA photolyase activity	GO:0006464//cellular protein modification process;GO:0006281//DNA repair;GO:0006259//DNA metabolic process;GO:0018298//protein-chromophore linkage	K01669//deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]	gi|823683792|ref|NP_001296304.1|//cryptochrome DASH, chloroplastic/mitochondrial [Solanum lycopersicum]
Solyc04g077300.3.1	1659	3.2578217616865	21.2109081061081	2.70282680851957	0.0178364523693203	Up	0.00564320142056026	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723694998|ref|XP_010320281.1|//PREDICTED: LOW QUALITY PROTEIN: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 [Solanum lycopersicum]
Solyc01g005930.3.1	1543	389.575301749191	170.386184758801	-1.19309385269947	0.000509144466866262	Down	0.000105043783513671	NA	NA	NA	NA	gi|460365584|ref|XP_004228681.1|//PREDICTED: uncharacterized protein LOC101264048 isoform X2 [Solanum lycopersicum];gi|723655931|ref|XP_010316208.1|//PREDICTED: uncharacterized protein LOC101264048 isoform X1 [Solanum lycopersicum]
Solyc02g083980.3.1	3435	2323.08545885051	171.785340197946	-3.75736339697731	4.25980281293251e-17	Down	1.08289306635604e-18	NA	GO:0016798//hydrolase activity, acting on glycosyl bonds	GO:0044238//primary metabolic process	K01179//endoglucanase [EC:3.2.1.4]	gi|460373350|ref|XP_004232483.1|//PREDICTED: endoglucanase 2-like [Solanum lycopersicum]
Solyc04g079240.3.1	1838	3.17919804244507	387.495726107077	6.92937369863411	1.44413424026476e-33	Up	7.85908748615832e-36	NA	GO:0003824//catalytic activity	GO:0044238//primary metabolic process	K16815//calcium-independent phospholipase A2-gamma	gi|723695439|ref|XP_010320346.1|//PREDICTED: patatin-like protein 2 isoform X1 [Solanum lycopersicum]
Solyc01g091160.4.1	1996	274.363283550693	633.436885676253	1.20711345251069	0.00413676008395443	Up	0.00108075709812273	NA	GO:0043169//cation binding;GO:0016813//hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines	GO:0009446//putrescine biosynthetic process	K01476//arginase [EC:3.5.3.1]	gi|350538013|ref|NP_001234578.1|//arginase 1 [Solanum lycopersicum]
Solyc11g068940.1.1	1272	8.27651594374737	1362.5460413092	7.36306568184588	7.48665538174241e-42	Up	2.00924104474972e-44	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K10260//F-box and WD-40 domain protein 7;K08332//vacuolar protein 8	gi|460411394|ref|XP_004251097.1|//PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Solanum lycopersicum]
Solyc01g100870.3.1	1159	3208.51994921612	7895.40310947472	1.29910497321019	5.21835576852482e-05	Up	8.57601408357907e-06	GO:0044464//cell part;GO:0005622//intracellular	GO:0032561//guanyl ribonucleotide binding;GO:0005525//GTP binding	GO:0007264//small GTPase mediated signal transduction;GO:0035556//intracellular signal transduction	K07937//ADP-ribosylation factor 1	gi|568214929|ref|NP_001274834.1|//ARF-like small GTPase-like protein [Solanum tuberosum]
Solyc11g007090.2.1	2747	1118.00577118996	452.657219079866	-1.30443676732886	6.98890028725029e-08	Down	6.64034099903123e-09	GO:0043231//intracellular membrane-bounded organelle;GO:0044444//cytoplasmic part;GO:0009570//chloroplast stroma	GO:0070011//peptidase activity, acting on L-amino acid peptides;GO:0046872//metal ion binding;GO:0008237//metallopeptidase activity;GO:0004177//aminopeptidase activity;GO:0008270//zinc ion binding	GO:0006508//proteolysis;GO:0019538//protein metabolic process	K01267//aspartyl aminopeptidase [EC:3.4.11.21]	gi|460409094|ref|XP_004249975.1|//PREDICTED: probable aspartyl aminopeptidase [Solanum lycopersicum];gi|661896708|emb|CDO99897.1|//unnamed protein product [Coffea canephora];gi|970063999|ref|XP_015058951.1|//PREDICTED: probable aspartyl aminopeptidase [Solanum pennellii]
Solyc02g091840.3.1	3884	2860.39583542588	631.081018570043	-2.18031767165558	3.06625338383927e-05	Down	4.82087996609291e-06	NA	NA	NA	K00924	gi|567757509|ref|NP_001274713.1|//leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1-like precursor [Solanum lycopersicum]
Solyc02g071910.1.1	696	0.353736600664742	5.16978677308744	3.86935737242449	0.0189917974793852	Up	0.00606253740917902	NA	NA	NA	K09874//aquaporin NIP	gi|970009178|ref|XP_015065457.1|//PREDICTED: aquaporin NIP1-1-like [Solanum pennellii]
Solyc02g081330.4.1	2099	4273.35170695832	380.93690807752	-3.4877440800198	8.33382793534115e-21	Down	1.41340827142546e-22	GO:0009536//plastid;GO:0009507//chloroplast	GO:0004337//geranyltranstransferase activity;GO:0016767//geranylgeranyl-diphosphate geranylgeranyltransferase activity	GO:0016117//carotenoid biosynthetic process;GO:0016109//tetraterpenoid biosynthetic process	K02291//phytoene synthase [EC:2.5.1.32]	gi|350534780|ref|NP_001234671.1|//phytoene synthase 2, chloroplastic [Solanum lycopersicum]
Solyc01g108300.3.1	1806	1042.62089058392	108.682254015233	-3.2620263751839	1.55947736987034e-15	Down	4.7084265304718e-17	NA	NA	NA	K14491//two-component response regulator ARR-B family	gi|856116669|ref|NP_001297051.1|//Myb family transcription factor [Solanum lycopersicum];gi|460369903|ref|XP_004230796.1|//PREDICTED: uncharacterized protein LOC101243935 isoform X1 [Solanum lycopersicum]
Solyc03g025340.1.1	1050	989.940843482161	5709.10105385764	2.52784937811563	1.63192715125959e-11	Up	8.66208537123027e-13	NA	NA	NA	K19747//BAHD acyltransferase [EC:2.3.1.-];K05747//Wiskott-Aldrich syndrome protein;K01759//lactoylglutathione lyase [EC:4.4.1.5]	gi|460377282|ref|XP_004234422.1|//PREDICTED: probable calcium-binding protein CML50 [Solanum lycopersicum]
Solyc08g062500.3.1	4078	854.480920787398	2340.96633966032	1.45398400607643	3.63507841993586e-06	Up	4.73828434267023e-07	NA	NA	NA	NA	gi|460399070|ref|XP_004245066.1|//PREDICTED: uncharacterized protein LOC101249285 [Solanum lycopersicum]
Solyc09g031580.3.1	4010	503.888904857312	235.915379712394	-1.09483621660789	0.000848133536697877	Down	0.000185507209230531	NA	NA	NA	K10896//fanconi anemia group M protein;K11643//chromodomain-helicase-DNA-binding protein 4 [EC:3.6.4.12];K06672//cohesin loading factor subunit SCC2;K03580//ATP-dependent helicase HepA [EC:3.6.4.-];K17586//PHD and RING finger domain-containing protein 1	gi|460402924|ref|XP_004246957.1|//PREDICTED: uncharacterized protein LOC101264968 isoform X1 [Solanum lycopersicum];gi|723729356|ref|XP_010326181.1|//PREDICTED: uncharacterized protein LOC101264968 isoform X2 [Solanum lycopersicum]
Solyc08g074450.3.1	5677	1209.37059939419	228.771268406589	-2.40227863243729	1.45751995232961e-11	Down	7.68202330622512e-13	NA	NA	NA	K13172//serine/arginine repetitive matrix protein 2	gi|460401105|ref|XP_004246069.1|//PREDICTED: protein starmaker [Solanum lycopersicum]
Solyc12g098430.2.1	1454	23.5423237279203	112.67272104194	2.25880963721071	6.16128719808144e-07	Up	6.89974912095209e-08	GO:0043232//intracellular non-membrane-bounded organelle	NA	GO:0008154//actin polymerization or depolymerization	K05755//actin related protein 2/3 complex, subunit 4	gi|460415286|ref|XP_004252990.1|//PREDICTED: actin-related protein 2/3 complex subunit 4 isoform X1 [Solanum lycopersicum]
Solyc03g113190.1.1	3144	792.421486824169	289.661728972477	-1.45189891625931	0.000117671901095518	Down	2.09307556294846e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460380902|ref|XP_004236192.1|//PREDICTED: uncharacterized protein LOC101246333 [Solanum lycopersicum]
Solyc12g042470.2.1	1210	767.564473960984	89.88318598655	-3.09416477112289	3.66441720316342e-09	Down	2.83149577387721e-10	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K19642//D-galacturonate reductase [EC:1.1.1.365];K00011//aldehyde reductase [EC:1.1.1.21]	gi|460413859|ref|XP_004252294.1|//PREDICTED: methylecgonone reductase-like [Solanum lycopersicum]
Solyc09g010740.3.1	1582	5.65810926821776	216.453129893622	5.2575908136951	0.000993311208016453	Up	0.000220553796675667	NA	NA	NA	K14826//FK506-binding nuclear protein [EC:5.2.1.8]	gi|460401885|ref|XP_004246446.1|//PREDICTED: uncharacterized protein LOC101259474 [Solanum lycopersicum]
Solyc09g011045.1.1	998	26.3200116672492	6.67282159211078	-1.97979129173304	0.0347363084771271	Down	0.0121952010917105	NA	NA	NA	K05909//laccase [EC:1.10.3.2]	gi|723729068|ref|XP_004246867.2|//PREDICTED: laccase-17-like [Solanum lycopersicum]
Solyc07g063530.3.1	1205	1651.34754725131	719.880587607811	-1.19781426579983	0.00168062071557582	Down	0.000393406071783814	NA	NA	NA	NA	gi|460397271|ref|XP_004244191.1|//PREDICTED: uncharacterized protein LOC101244304 [Solanum lycopersicum]
Solyc02g031920.3.1	1088	59.5542146211049	7.31818147532871	-3.02464651348709	0.000312201889780543	Down	6.12735301216978e-05	NA	NA	NA	NA	gi|460371526|ref|XP_004231587.1|//PREDICTED: pathogen-related protein-like [Solanum lycopersicum]
Solyc02g079990.3.1	2971	100.456405093921	371.146887418659	1.88542071674724	0.000361096003785132	Up	7.18477138886625e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723674038|ref|XP_010316621.1|//PREDICTED: putative receptor-like protein kinase At4g00960 isoform X1 [Solanum lycopersicum]
Solyc01g007000.3.1	1389	163.415005462689	5602.22277333477	5.09938698447521	1.90156577804483e-15	Up	5.79797527374636e-17	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K10260//F-box and WD-40 domain protein 7;K01876//aspartyl-tRNA synthetase [EC:6.1.1.12];K08332//vacuolar protein 8	gi|460365615|ref|XP_004228696.1|//PREDICTED: E3 ubiquitin-protein ligase PUB22-like [Solanum lycopersicum]
Solyc06g075500.3.1	2120	216.069916060044	26.4352874526722	-3.0309612967111	5.07090564004862e-07	Down	5.5891859168122e-08	NA	NA	NA	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460391298|ref|XP_004241260.1|//PREDICTED: protein NRT1/ PTR FAMILY 2.7-like [Solanum lycopersicum]
Solyc10g083460.1.1	480	363.714740318444	40.9472296641139	-3.15096964233466	2.41106794010396e-11	Down	1.32739948842014e-12	NA	NA	NA	NA	gi|460408024|ref|XP_004249448.1|//PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 4-like [Solanum lycopersicum]
Solyc05g051560.3.1	1751	204.83921755308	67.373869469402	-1.60423088856795	0.000349221362162079	Down	6.92506950463047e-05	NA	NA	NA	K14684//solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41	gi|460388730|ref|XP_004240018.1|//PREDICTED: probable mitochondrial adenine nucleotide transporter BTL3 [Solanum lycopersicum]
Solyc01g091840.3.1	1966	185.903842521776	1105.61517940374	2.57222083294782	1.59680138238834e-07	Up	1.61180041132683e-08	NA	NA	NA	K15277//solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B3	gi|460367996|ref|XP_004229856.1|//PREDICTED: UDP-galactose/UDP-glucose transporter 4-like isoform X1 [Solanum lycopersicum]
Solyc10g085680.2.1	2456	2145.11483488172	121.991163510303	-4.13620632752457	1.28616209679217e-14	Down	4.37701652889239e-16	NA	NA	NA	K08818//cell division cycle 2-like [EC:2.7.11.22];K13412//calcium-dependent protein kinase [EC:2.7.11.1]	gi|460408360|ref|XP_004249613.1|//PREDICTED: serine/threonine-protein kinase STN8, chloroplastic [Solanum lycopersicum]
Solyc10g084325.1.1	2187	1120.24525147866	3865.88646541618	1.78698465746982	0.0125781323082951	Up	0.00378450439811236	NA	GO:0004175//endopeptidase activity;GO:0005515//protein binding	GO:0044092//negative regulation of molecular function;GO:0019538//protein metabolic process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K08653//membrane-bound transcription factor site-1 protease [EC:3.4.21.112];K13199//plasminogen activator inhibitor 1 RNA-binding protein;K12663//Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase [EC:5.3.3.-];K01183//chitinase [EC:3.2.1.14]	gi|460408141|ref|XP_004249505.1|//PREDICTED: subtilisin-like protease [Solanum lycopersicum]
Solyc06g074870.2.1	3052	2461.72194095559	218.744209392945	-3.49235108272292	2.00766644745482e-07	Down	2.06244547830083e-08	NA	NA	NA	K06670//cohesin complex subunit SCC1	gi|460391361|ref|XP_004241291.1|//PREDICTED: uncharacterized protein LOC101267613 [Solanum lycopersicum];gi|723710818|ref|XP_010322962.1|//PREDICTED: sister chromatid cohesion 1 protein 1 [Solanum lycopersicum]
Solyc01g091320.3.1	1629	13082.6608606644	721.42230820975	-4.18066815219342	7.29020887454158e-06	Down	1.00978142902179e-06	GO:0031224//intrinsic component of membrane	GO:0046914//transition metal ion binding;GO:0003824//catalytic activity	GO:0006631//fatty acid metabolic process	K14423//4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha-methyl oxidase [EC:1.14.13.72]	gi|723660662|ref|XP_010325726.1|//PREDICTED: methylsterol monooxygenase 1-1-like [Solanum lycopersicum]
Solyc04g071980.3.1	1310	341.350296968633	1293.37837580536	1.92181948294671	1.04602227923617e-07	Up	1.02309619081396e-08	NA	NA	NA	NA	gi|460384261|ref|XP_004237831.1|//PREDICTED: uncharacterized protein LOC101255194 [Solanum lycopersicum]
Solyc08g078020.1.1	459	8518.31693578707	496.287572073207	-4.10132017581462	2.91097951166038e-13	Down	1.19789823351463e-14	NA	NA	NA	NA	gi|350534528|ref|NP_001234145.1|//methionine rich arabinogalactan precursor [Solanum lycopersicum]
Solyc06g007180.3.1	2413	38.7826684287487	139.952654510171	1.85145487492728	0.0181054837351744	Up	0.00573641761402201	NA	NA	NA	K01953//asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]	gi|1000232056|ref|NP_001306778.1|//asparagine synthetase [Solanum lycopersicum]
Solyc07g061990.3.1	2066	6455.04407124433	339.835431223653	-4.24751876465601	4.7644990868982e-16	Down	1.36214805414154e-17	NA	GO:0016765//transferase activity, transferring alkyl or aryl (other than methyl) groups	GO:0006720//isoprenoid metabolic process	K05356//all-trans-nonaprenyl-diphosphate synthase [EC:2.5.1.84 2.5.1.85]	gi|998070225|ref|NP_001307204.1|//solanesyl diphosphate synthase [Solanum lycopersicum]
Solyc11g006340.2.1	2601	1247.99259450329	617.309405473099	-1.0155436954926	0.000287035882596621	Down	5.58172878897634e-05	NA	NA	NA	K11808//phosphoribosylaminoimidazole carboxylase [EC:4.1.1.21]	gi|460408999|ref|XP_004249928.1|//PREDICTED: phosphoribosylaminoimidazole carboxylase, chloroplastic-like [Solanum lycopersicum]
Solyc05g006700.3.1	1198	166.598202596414	20.416551706809	-3.02856171064237	0.0011586381900269	Down	0.000261371638811794	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|970030245|ref|XP_015076410.1|//PREDICTED: wall-associated receptor kinase 4 [Solanum pennellii]
Solyc04g014400.3.1	4160	2529.4125962961	9858.0863324273	1.96250522773689	0.0130870664597286	Up	0.00396055958649682	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13466//EIX receptor 1/2;K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1];K18195//rhamnogalacturonan endolyase [EC:4.2.2.23];K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|723689219|ref|XP_010319234.1|//PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2 isoform X1 [Solanum lycopersicum];gi|723689222|ref|XP_010319235.1|//PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2 isoform X2 [Solanum lycopersicum];gi|723690970|ref|XP_010319534.1|//PREDICTED: receptor-like cytosolic serine/threonine-protein kinase RBK1, partial [Solanum lycopersicum]
Solyc10g055780.1.1	929	148.823498373796	38.5894681227034	-1.94732327316128	0.0444768274443259	Down	0.0163066227352911	GO:0043231//intracellular membrane-bounded organelle;GO:0005618//cell wall;GO:0030312//external encapsulating structure;GO:0005576//extracellular region;GO:0005773//vacuole	GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0008061//chitin binding;GO:0030247//polysaccharide binding;GO:0004568//chitinase activity	GO:0033554//cellular response to stress;GO:0009626//plant-type hypersensitive response;GO:0006032//chitin catabolic process;GO:0016998//cell wall macromolecule catabolic process;GO:0000272//polysaccharide catabolic process;GO:0006026//aminoglycan catabolic process;GO:0009607//response to biotic stimulus	K20547;K01183//chitinase [EC:3.2.1.14]	gi|460406368|ref|XP_004248637.1|//PREDICTED: endochitinase 4 [Solanum lycopersicum]
Solyc12g019290.1.1	2196	57.9182191795225	1.06760955460828	-5.76156121712302	0.000109487123266234	Down	1.93075734371759e-05	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial	gi|460413219|ref|XP_004251992.1|//PREDICTED: pentatricopeptide repeat-containing protein At2g37230 [Solanum lycopersicum]
Solyc02g077330.3.1	1375	1328.54892389507	458.02909344537	-1.5363402115773	0.00955814882449739	Down	0.00278108355911833	NA	GO:0016787//hydrolase activity	NA	K21026;K01188//beta-glucosidase [EC:3.2.1.21];K00679//phospholipid:diacylglycerol acyltransferase [EC:2.3.1.158];K10960//geranylgeranyl reductase [EC:1.3.1.83]	gi|460374294|ref|XP_004232946.1|//PREDICTED: GDSL esterase/lipase At5g45950 [Solanum lycopersicum]
BGI_novel_G000181	8291	1522.44679952159	654.984492877869	-1.21685915982494	0.000739147083621657	Down	0.00015902627727241	NA	NA	NA	K05909//laccase [EC:1.10.3.2];K00620//glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1];K03469//ribonuclease HI [EC:3.1.26.4];K18195//rhamnogalacturonan endolyase [EC:4.2.2.23]	gi|971585183|ref|XP_015160449.1|//PREDICTED: uncharacterized protein LOC107058800 [Solanum tuberosum]
Solyc01g104470.3.1	1152	3119.15613188669	7560.58147218481	1.27734142428468	4.99061620277409e-06	Up	6.68203289340675e-07	GO:0030529//intracellular ribonucleoprotein complex	NA	GO:0022613//ribonucleoprotein complex biogenesis	K14815//mRNA turnover protein 4	gi|460369336|ref|XP_004230519.1|//PREDICTED: mRNA turnover protein 4 homolog [Solanum lycopersicum]
Solyc02g063480.2.1	1526	6.71989409142603	30.3092490895432	2.17324770908329	0.0189133915632672	Up	0.00602834394131124	NA	NA	NA	K00924;K02882//large subunit ribosomal protein L18Ae	gi|460376339|ref|XP_004233956.1|//PREDICTED: basic 7S globulin-like [Solanum lycopersicum]
BGI_novel_G000229	2418	99.2233204040726	28.1744973453616	-1.81628936446956	0.000378068352381271	Down	7.55065689599989e-05	NA	NA	NA	NA	NA
Solyc01g104500.2.1	1691	1229.81264367197	2984.49776024429	1.27904962678093	3.70055633390273e-05	Up	5.9119518589187e-06	NA	GO:0005488//binding	NA	K01191//alpha-mannosidase [EC:3.2.1.24]	gi|970003376|ref|XP_015062457.1|//PREDICTED: uncharacterized protein LOC107008067 isoform X2 [Solanum pennellii];gi|460369340|ref|XP_004230521.1|//PREDICTED: uncharacterized protein LOC101262665 [Solanum lycopersicum]
Solyc05g054365.1.1	2600	799.530269882564	1977.42052900222	1.30639515538333	0.0349516338439272	Up	0.012289352991269	NA	GO:0016627//oxidoreductase activity, acting on the CH-CH group of donors;GO:0050662//coenzyme binding	GO:0008152//metabolic process	K00249//acyl-CoA dehydrogenase [EC:1.3.8.7]	gi|460388290|ref|XP_004239801.1|//PREDICTED: acyl-CoA dehydrogenase family member 10-like [Solanum lycopersicum]
Solyc01g081320.3.1	3685	578.601422363686	23.6212848351106	-4.61441052516873	0.00307128445325521	Down	0.000773087219055929	NA	NA	NA	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|723659283|ref|XP_010323363.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g27460 [Solanum lycopersicum]
Solyc06g076020.3.1	2355	1104.42553792134	68802.6255068935	5.96109556084068	7.44440391256772e-23	Up	1.04057382854216e-24	NA	GO:0032559//adenyl ribonucleotide binding	GO:0050896//response to stimulus	K03283//heat shock 70kDa protein 1/8	gi|807045793|ref|NP_001234491.2|//heat shock cognate 70 kDa protein 1 [Solanum lycopersicum]
Solyc09g091150.2.1	2094	170.330428470242	546.730380845684	1.68249335926696	6.33694908067662e-07	Up	7.11217894808309e-08	NA	NA	NA	NA	gi|723732731|ref|XP_010326805.1|//PREDICTED: uncharacterized protein LOC101250340 isoform X2 [Solanum lycopersicum];gi|460404678|ref|XP_004247808.1|//PREDICTED: uncharacterized protein LOC101250340 isoform X1 [Solanum lycopersicum]
Solyc05g006050.3.1	1974	1111.13536799754	341.728931355283	-1.70111028978412	0.0005501944980756	Down	0.000114579419291352	NA	NA	GO:0009987//cellular process	K18810//cyclin D1/2/4, plant	gi|460386036|ref|XP_004238706.1|//PREDICTED: cyclin-D1-1 [Solanum lycopersicum]
Solyc11g072490.2.1	2503	2220.87250046797	657.294107835494	-1.75651561312632	0.00136053315078647	Down	0.000311733907778607	GO:0005886//plasma membrane	NA	NA	K10352//myosin heavy chain;K20283//golgin subfamily A member 4;K20478//golgin subfamily B member 1	gi|460411749|ref|XP_004251268.1|//PREDICTED: interactor of constitutive active ROPs 3-like isoform X1 [Solanum lycopersicum];gi|460411753|ref|XP_004251270.1|//PREDICTED: interactor of constitutive active ROPs 3-like isoform X2 [Solanum lycopersicum]
Solyc07g054170.3.1	1957	287.596437728085	28.5112849178753	-3.33444084237243	0.00210435692615328	Down	0.000505146063978944	NA	NA	GO:0000003//reproduction	K20628	gi|460395545|ref|XP_004243343.1|//PREDICTED: expansin-B3 [Solanum lycopersicum]
Solyc09g008200.3.1	1581	2612.18918998684	11078.8763791143	2.0844802763375	0.000905647294202138	Up	0.000199473306300896	NA	NA	NA	K07213//copper chaperone	gi|971562765|ref|XP_015167314.1|//PREDICTED: uncharacterized protein LOC102588920 isoform X1 [Solanum tuberosum];gi|460402253|ref|XP_004246628.1|//PREDICTED: neurofilament medium polypeptide [Solanum lycopersicum]
Solyc02g068140.3.1	2277	641.454602500427	197.535588498129	-1.69923456924919	0.00190318407486398	Down	0.000452385747927822	NA	NA	NA	K14794//ribosomal RNA-processing protein 12	gi|460374992|ref|XP_004233292.1|//PREDICTED: probable transporter mch1 [Solanum lycopersicum]
Solyc12g010390.2.1	1974	2990.6303726857	8023.38215981286	1.42376090414827	0.00835672544684932	Up	0.00238416492359418	GO:0031224//intrinsic component of membrane	NA	NA	K17086//transmembrane 9 superfamily member 2/4	gi|970068170|ref|XP_015061206.1|//PREDICTED: transmembrane 9 superfamily member 11-like [Solanum pennellii]
Solyc12g056640.2.1	2100	457.489398662143	982.057225921983	1.10206878254223	0.0358943376000671	Up	0.0126609555952525	GO:0031224//intrinsic component of membrane	NA	NA	K15285//solute carrier family 35, member E3	gi|460414416|ref|XP_004252567.1|//PREDICTED: UDP-galactose transporter 2 [Solanum lycopersicum];gi|698515458|ref|XP_009802605.1|//PREDICTED: UDP-galactose transporter 2-like [Nicotiana sylvestris]
Solyc11g008490.2.1	4124	30.659759787757	5.301835835867	-2.53178248893316	0.00131229044003574	Down	0.000299261700914667	NA	NA	NA	K17943//pumilio RNA-binding family	gi|460409274|ref|XP_004250064.1|//PREDICTED: pumilio homolog 4-like [Solanum lycopersicum]
Solyc06g060230.3.1	2132	1761.41533975433	13601.9332186513	2.94900467347428	2.51882099471497e-14	Up	8.95689290650844e-16	NA	GO:0003676//nucleic acid binding	NA	K12581//CCR4-NOT transcription complex subunit 7/8;K03094//S-phase kinase-associated protein 1;K13126//polyadenylate-binding protein;K05941//glutathione gamma-glutamylcysteinyltransferase [EC:2.3.2.15];K01054//acylglycerol lipase [EC:3.1.1.23]	gi|350535899|ref|NP_001234219.1|//Nam-like protein 1 [Solanum lycopersicum]
Solyc08g067630.3.1	744	397.899590147913	10743.1730649537	4.75487194225516	5.0152317978292e-15	Up	1.60020814780893e-16	NA	NA	NA	NA	gi|460399394|ref|XP_004245226.1|//PREDICTED: uncharacterized protein LOC101248124 [Solanum lycopersicum]
Solyc12g096950.2.1	1470	3.8277988227869	23.1973126702759	2.59937077036226	0.0116064410086937	Up	0.00345234080995138	NA	NA	NA	NA	gi|723753298|ref|XP_010314768.1|//PREDICTED: oxidation resistance protein 1-like [Solanum lycopersicum]
Solyc03g031700.3.1	1787	2254.96950493696	666.183446562	-1.75911651209515	0.00632121392239746	Down	0.00174382377514774	NA	NA	NA	K09015//Fe-S cluster assembly protein SufD;K07033//uncharacterized protein;K20867	gi|460377398|ref|XP_004234480.1|//PREDICTED: UPF0051 protein ABCI8, chloroplastic-like [Solanum lycopersicum]
Solyc04g025210.3.1	2384	159.269442887904	778.260545319742	2.28878371927012	2.52999648641532e-10	Up	1.6258065985463e-11	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K12812//ATP-dependent RNA helicase UAP56/SUB2 [EC:3.6.4.13];K18081//myotubularin-related protein 1/2 [EC:3.1.3.64 3.1.3.95];K19307//25S rRNA (uracil2634-N3)-methyltransferase [EC:2.1.1.313]	gi|723691329|ref|XP_010319578.1|//PREDICTED: uncharacterized protein LOC101252278 isoform X2 [Solanum lycopersicum];gi|971537673|ref|XP_015169796.1|//PREDICTED: uncharacterized protein LOC102581350 isoform X2 [Solanum tuberosum];gi|460383141|ref|XP_004237290.1|//PREDICTED: uncharacterized protein LOC101252278 isoform X1 [Solanum lycopersicum]
Solyc09g010640.2.1	2324	2536.38875012941	8266.53482025733	1.70450682176063	2.61492501547466e-05	Up	4.05767587573469e-06	NA	NA	NA	NA	gi|565348070|ref|XP_006341041.1|//PREDICTED: uncharacterized protein LOC102580463 [Solanum tuberosum];gi|970052958|ref|XP_015088105.1|//PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC107031300 [Solanum pennellii]
Solyc12g006760.1.1	261	472.149904232905	20.0418725549409	-4.55815576369821	5.6463952825868e-06	Down	7.63441114745598e-07	NA	NA	NA	NA	NA
Solyc08g081070.3.1	2944	200.099236617586	70.7879629638276	-1.49913969804806	0.000353990983886163	Down	7.02756813842889e-05	NA	NA	NA	K15113//solute carrier family 25 (mitochondrial iron transporter), member 28/37;K15105//solute carrier family 25 (mitochondrial aspartate/glutamate transporter), member 12/13;K15111//solute carrier family 25 (mitochondrial S-adenosylmethionine transporter), member 26	gi|723726336|ref|XP_010325670.1|//PREDICTED: uncharacterized protein LOC101257884 [Solanum lycopersicum]
Solyc09g007770.2.1	1001	1617.27941556817	447.857651561709	-1.85245679349194	0.0486597150714891	Down	0.0181122675825216	GO:0016021//integral component of membrane	GO:0005215//transporter activity	GO:0006810//transport	K09872//aquaporin PIP	gi|723728331|ref|XP_010325989.1|//PREDICTED: aquaporin PIP2-1-like [Solanum lycopersicum]
Solyc09g014770.3.1	3311	2862.56274964931	898.774414106705	-1.67127635833597	1.08466672735579e-06	Down	1.28366514811191e-07	GO:0005634//nucleus;GO:0005829//cytosol;GO:0031307//integral component of mitochondrial outer membrane	GO:0003876//AMP deaminase activity;GO:0043424//protein histidine kinase binding	GO:0032264//IMP salvage;GO:0009737//response to abscisic acid;GO:0009793//embryo development ending in seed dormancy	K01490//AMP deaminase [EC:3.5.4.6]	gi|460401623|ref|XP_004246317.1|//PREDICTED: AMP deaminase isoform X2 [Solanum lycopersicum];gi|723726936|ref|XP_010325783.1|//PREDICTED: AMP deaminase isoform X1 [Solanum lycopersicum]
Solyc06g035810.1.1	1380	49.7206417660395	287.57990507378	2.53204604645849	1.07373591552195e-07	Up	1.05340425289018e-08	NA	NA	NA	K16302//metal transporter CNNM;K15449//tRNA wybutosine-synthesizing protein 1 [EC:4.1.3.44]	gi|565346999|ref|XP_006340522.1|//PREDICTED: probable methyltransferase PMT15 [Solanum tuberosum]
Solyc11g011630.2.1	1589	11.6202183267587	290.916906970119	4.64589806253256	1.28757631181964e-10	Up	7.89497179418259e-12	NA	NA	NA	K14488//SAUR family protein;K09494//T-complex protein 1 subunit beta	gi|971559109|ref|XP_015166369.1|//PREDICTED: auxin-responsive protein SAUR21-like [Solanum tuberosum];gi|460409578|ref|XP_004250215.1|//PREDICTED: auxin-induced protein 6B-like [Solanum lycopersicum]
Solyc12g009080.2.1	1104	576.338219498895	246.174630008403	-1.22723360447212	0.00309023887413119	Down	0.000778779820635194	NA	NA	NA	NA	gi|460412603|ref|XP_004251687.1|//PREDICTED: uncharacterized protein LOC101249047 [Solanum lycopersicum]
Solyc05g053780.3.1	891	2873.06929756245	5925.49013234775	1.04434170213118	0.000519053516859127	Up	0.000107300984214281	NA	GO:0005488//binding	NA	K12741//heterogeneous nuclear ribonucleoprotein A1/A3	gi|685341703|ref|XP_009107498.1|//PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial [Brassica rapa];gi|970026483|ref|XP_015074552.1|//PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like [Solanum pennellii]
Solyc07g056470.3.1	823	52.2454651928044	739.231449589298	3.822648410994	2.22402594325483e-05	Up	3.40136366675659e-06	NA	GO:0016765//transferase activity, transferring alkyl or aryl (other than methyl) groups	GO:0009755//hormone-mediated signaling pathway	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|460395247|ref|XP_004243196.1|//PREDICTED: probable glutathione S-transferase [Solanum lycopersicum]
Solyc12g013600.2.1	5246	37.42383400952	104.560703864851	1.48231148501091	0.00176359687193197	Up	0.000415524669281422	NA	NA	NA	K10706//senataxin [EC:3.6.4.-]	gi|723748471|ref|XP_010313889.1|//PREDICTED: uncharacterized protein LOC101256850 [Solanum lycopersicum]
Solyc07g062730.1.1	2142	1244.27216879421	172.202816889589	-2.85312144366254	7.19727670372368e-05	Down	1.2174311048717e-05	NA	NA	NA	NA	gi|460397400|ref|XP_004244255.1|//PREDICTED: uncharacterized protein LOC101262936 [Solanum lycopersicum]
Solyc11g006030.1.1	1293	97.3216670123863	908.338038852692	3.2223963603878	3.35911505080034e-05	Up	5.33767238018557e-06	NA	NA	NA	K10260//F-box and WD-40 domain protein 7;K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K08332//vacuolar protein 8	gi|970061975|ref|XP_015057864.1|//PREDICTED: U-box domain-containing protein 21-like [Solanum pennellii]
Solyc08g015960.3.1	1363	2057.64871145272	401.981940853961	-2.35579410710494	1.93737384026212e-16	Down	5.29333168671587e-18	NA	NA	NA	K15437//aminoacyl tRNA synthase complex-interacting multifunctional protein 1	gi|460398484|ref|XP_004244789.1|//PREDICTED: aminoacyl tRNA synthase complex-interacting multifunctional protein 1 [Solanum lycopersicum]
Solyc06g073860.2.1	1873	736.683961767534	2547.02529758633	1.78969554944243	9.02583535020416e-07	Up	1.04765361862739e-07	NA	NA	NA	K19043//E3 ubiquitin-protein ligase RHF [EC:2.3.2.27]	gi|460391501|ref|XP_004241359.1|//PREDICTED: E3 ubiquitin-protein ligase RHF2A-like [Solanum lycopersicum]
Solyc07g053290.3.1	1306	408.85652868494	29.8191971672278	-3.77728135665311	1.19642265706709e-11	Down	6.23452689197774e-13	NA	NA	NA	K13422//transcription factor MYC2	gi|460395679|ref|XP_004243409.1|//PREDICTED: transcription factor bHLH30-like [Solanum lycopersicum]
Solyc08g082970.3.1	1520	535.071775791286	1134.20369887452	1.08387543022505	0.0436811663919279	Up	0.0159536231795877	NA	NA	NA	K18726//FAS-associated factor 2	gi|460399894|ref|XP_004245471.1|//PREDICTED: FAS-associated factor 2-like [Solanum lycopersicum]
Solyc06g064570.3.1	1585	3064.84646534951	325.223318165845	-3.23631219743565	7.05289195830121e-20	Down	1.34075402517281e-21	NA	NA	NA	K06119//sulfoquinovosyltransferase [EC:2.4.1.-]	gi|460392577|ref|XP_004241892.1|//PREDICTED: transmembrane protein 41B [Solanum lycopersicum]
Solyc01g081480.3.1	3879	2191.92861091913	55.9828875038336	-5.29107110096907	3.11252665854774e-73	Down	8.12124892270545e-77	NA	NA	GO:0009987//cellular process	K06127//2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.201]	gi|460367360|ref|XP_004229542.1|//PREDICTED: uncharacterized protein LOC101262956 [Solanum lycopersicum]
Solyc00g156980.3.1	580	119.704526697652	11.9030017699614	-3.3300803577138	0.00674860419078394	Down	0.001878581187445	NA	NA	NA	K15403//fatty acid omega-hydroxy dehydrogenase [EC:1.1.-.-]	gi|460416278|ref|XP_004253473.1|//PREDICTED: protein HOTHEAD-like [Solanum lycopersicum]
Solyc11g013880.1.1	2514	910.570299862928	3612.45391823549	1.98813687544358	0.000387023093974385	Up	7.75402240238675e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460409867|ref|XP_004250358.1|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Solanum lycopersicum]
Solyc11g007490.1.1	1332	1.48497582475153	86.1611230484599	5.85852570509204	1.81919934778948e-11	Up	9.73747675348775e-13	NA	NA	NA	K13080//flavanone 7-O-glucoside 2''-O-beta-L-rhamnosyltransferase [EC:2.4.1.236];K18823//soyasaponin III rhamnosyltransferase [EC:2.4.1.273]	gi|460410134|ref|XP_004250486.1|//PREDICTED: crocetin glucoside glucosyltransferase-like [Solanum lycopersicum]
Solyc10g005450.2.1	2929	4.18715972844809	26.8316740906139	2.67989321148231	0.00622709139544426	Up	0.00171391243715373	NA	NA	NA	K15014//solute carrier family 29 (equilibrative nucleoside transporter), member 1/2/3	gi|723735032|ref|XP_010327232.1|//PREDICTED: equilibrative nucleotide transporter 3-like isoform X2 [Solanum lycopersicum];gi|698487949|ref|XP_009790593.1|//PREDICTED: equilibrative nucleotide transporter 3-like isoform X1 [Nicotiana sylvestris]
Solyc03g083960.3.1	1971	480.613799335672	1530.21605333671	1.67078538673055	0.0173749205044794	Up	0.00546223420173128	NA	GO:0004805//trehalose-phosphatase activity	GO:0005992//trehalose biosynthetic process;GO:0016311//dephosphorylation;GO:0005991//trehalose metabolic process	K01087//trehalose 6-phosphate phosphatase [EC:3.1.3.12]	gi|723682014|ref|XP_010317997.1|//PREDICTED: trehalose-phosphate phosphatase A [Solanum lycopersicum]
Solyc01g091270.3.1	1206	114.434128340122	9.84266020675039	-3.539325279205	7.13157053552358e-05	Down	1.20605097359738e-05	NA	NA	NA	K15622//myeloid leukemia factor 1	gi|460367904|ref|XP_004229810.1|//PREDICTED: uncharacterized protein LOC101251620 isoform X1 [Solanum lycopersicum]
Solyc02g069260.3.1	3630	3128.19647419829	7584.71839659307	1.27776448991004	0.033282668944642	Up	0.0116194079817921	NA	NA	NA	K11593//eukaryotic translation initiation factor 2C	gi|806933776|ref|NP_001266235.2|//Argonaute 2A [Solanum lycopersicum]
Solyc06g062390.3.1	1152	0.355597223917433	3.88961473450105	3.45131129718834	0.046009597679109	Up	0.0169714842191912	NA	NA	NA	K20728	gi|460392700|ref|XP_004241952.1|//PREDICTED: acid phosphatase 1-like [Solanum lycopersicum]
Solyc08g062860.3.1	3187	327.279655977711	963.449847144303	1.55768564243517	2.92827458970233e-06	Up	3.76130693160661e-07	GO:0031224//intrinsic component of membrane;GO:0019866//organelle inner membrane	NA	GO:0006810//transport	K15084//solute carrier family 25 (mitochondrial carrier protein), member 16	gi|460399096|ref|XP_004245079.1|//PREDICTED: mitochondrial substrate carrier family protein P [Solanum lycopersicum]
Solyc04g074180.4.1	4280	4255.91687506925	905.820911169976	-2.23217222298113	5.73958987936625e-15	Down	1.85272284014133e-16	NA	GO:0009882//blue light photoreceptor activity;GO:0016830//carbon-carbon lyase activity	GO:0009414//response to water deprivation;GO:0006259//DNA metabolic process;GO:0009785//blue light signaling pathway	K12118//cryptochrome 1	gi|350539503|ref|NP_001234667.1|//cryptochrome 1 [Solanum lycopersicum]
Solyc08g007950.3.1	3366	2589.58367241103	616.034285379708	-2.07163762290916	8.8339812918747e-22	Down	1.37969217284013e-23	NA	NA	NA	K02945//small subunit ribosomal protein S1;K11294//nucleolin;K14792//rRNA biogenesis protein RRP5	gi|460398108|ref|XP_004244605.1|//PREDICTED: uncharacterized protein LOC101250822 [Solanum lycopersicum]
Solyc12g009430.2.1	1651	232.825910503967	114.518227396097	-1.0236743759809	0.00929435534558135	Down	0.00269289638069196	NA	NA	NA	NA	gi|460412659|ref|XP_004251715.1|//PREDICTED: uncharacterized protein LOC101256947 [Solanum lycopersicum]
Solyc05g051880.3.1	1705	20.2413373426333	114.590735611746	2.50111389337379	6.29611448767377e-06	Up	8.60118517866572e-07	NA	NA	NA	K01087//trehalose 6-phosphate phosphatase [EC:3.1.3.12]	gi|723702186|ref|XP_010321465.1|//PREDICTED: probable trehalose-phosphate phosphatase H isoform X1 [Solanum lycopersicum];gi|723702189|ref|XP_010321466.1|//PREDICTED: probable trehalose-phosphate phosphatase H isoform X2 [Solanum lycopersicum]
Solyc10g081770.2.1	6661	442.258791746452	1767.50364269555	1.9987504604046	3.16707162846845e-05	Up	4.99827839381819e-06	NA	NA	NA	NA	gi|723738960|ref|XP_010312212.1|//PREDICTED: MORC family CW-type zinc finger protein 3-like [Solanum lycopersicum]
Solyc07g065140.3.1	1533	276.457566618814	559.742703508144	1.01770575837318	0.0432632778239426	Up	0.0157746154642093	NA	GO:0035252//UDP-xylosyltransferase activity	NA	K03714//glycoprotein 2-beta-D-xylosyltransferase [EC:2.4.2.38]	gi|460396990|ref|XP_004244052.1|//PREDICTED: beta-(1,2)-xylosyltransferase [Solanum lycopersicum]
Solyc09g090250.3.1	1962	651.364727944859	1562.64933145486	1.26245656105181	4.18541098042481e-06	Up	5.49307889595786e-07	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process	K08960//casein kinase 1, epsilon [EC:2.7.11.1]	gi|460404543|ref|XP_004247741.1|//PREDICTED: casein kinase I-like [Solanum lycopersicum];gi|565375939|ref|XP_006354472.1|//PREDICTED: casein kinase I-like [Solanum tuberosum]
Solyc12g057100.2.1	1349	253.850319289435	47.7797026560289	-2.40950829395561	0.0027829261865055	Down	0.000692100921289872	NA	NA	NA	NA	gi|460414340|ref|XP_004252530.1|//PREDICTED: purine permease 1-like [Solanum lycopersicum]
Solyc06g048700.1.1	234	7.35266832722509	490.350750311871	6.05940236753149	2.29473291982837e-16	Up	6.32958983402785e-18	NA	NA	NA	NA	NA
Solyc10g018340.1.1	417	5.73115114852019	414.964747172258	6.17802002385837	3.41827632105675e-16	Up	9.64527797465321e-18	NA	NA	NA	K14488//SAUR family protein	gi|460406207|ref|XP_004248559.1|//PREDICTED: auxin-induced protein 15A-like [Solanum lycopersicum]
Solyc07g053920.3.1	1984	450.460632526098	221.099453506126	-1.02670556968826	0.00428501070139914	Down	0.00112531637265877	NA	NA	NA	K19355//mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]	gi|460395574|ref|XP_004243357.1|//PREDICTED: mannan endo-1,4-beta-mannosidase 2-like [Solanum lycopersicum]
Solyc06g062883.1.1	2393	1927.16967793388	354.040701022596	-2.44449647029086	1.81450131549265e-27	Down	1.59617679460364e-29	NA	NA	NA	K03126//transcription initiation factor TFIID subunit 12	gi|723710106|ref|XP_010322827.1|//PREDICTED: transcription initiation factor TFIID subunit 12b-like [Solanum lycopersicum]
Solyc12g008980.2.1	2704	2514.7999645224	500.151533463856	-2.33000648096456	4.01101185921456e-06	Down	5.25821108873476e-07	GO:0016021//integral component of membrane;GO:0009536//plastid;GO:0009507//chloroplast	GO:0016705//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen;GO:0016853//isomerase activity;GO:0004497//monooxygenase activity;GO:0016491//oxidoreductase activity	GO:0016123//xanthophyll biosynthetic process;GO:0044550//secondary metabolite biosynthetic process;GO:0055114//oxidation-reduction process;GO:0016109//tetraterpenoid biosynthetic process	K06444//lycopene epsilon-cyclase [EC:5.5.1.18]	gi|806904704|ref|NP_001234337.2|//lycopene epsilon cyclase, chloroplastic [Solanum lycopersicum]
Solyc12g006700.2.1	1891	1737.03803286782	4761.7825616431	1.45487240145055	1.76870996659012e-05	Up	2.64634031828417e-06	NA	NA	NA	K01191//alpha-mannosidase [EC:3.2.1.24]	gi|460412374|ref|XP_004251576.1|//PREDICTED: uncharacterized protein LOC101266193 [Solanum lycopersicum]
Solyc01g104432.1.1	5111	1045.03564556562	2147.40703582216	1.03904352383604	0.00234730153132267	Up	0.000571076378967612	NA	NA	NA	K14297//nuclear pore complex protein Nup98-Nup96	gi|375161460|gb|AFA41498.1|//GATA zinc finger containing protein-like protein [Solanum tuberosum];gi|971553928|ref|XP_015165055.1|//PREDICTED: nuclear pore complex protein NUP98B-like isoform X1 [Solanum tuberosum]
Solyc05g053930.3.1	2977	644.567284731348	7514.18468733529	3.54321370487708	4.16010646776379e-63	Up	2.48105350694128e-66	NA	GO:0004674//protein serine/threonine kinase activity;GO:0005524//ATP binding;GO:0000166//nucleotide binding;GO:0004672//protein kinase activity	GO:0006468//protein phosphorylation	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|697099868|ref|XP_009588344.1|//PREDICTED: probable serine/threonine-protein kinase NAK [Nicotiana tomentosiformis];gi|460388368|ref|XP_004239839.1|//PREDICTED: probable serine/threonine-protein kinase NAK [Solanum lycopersicum]
Solyc11g069890.2.1	2415	5.605781030339	33.6878930662534	2.58724290426017	0.0293210713010525	Up	0.0100210564618812	NA	NA	NA	K16670//homeobox protein Meis2;K15613//homeobox protein Meis1	gi|460411541|ref|XP_004251168.1|//PREDICTED: BEL1-like homeodomain protein 9 [Solanum lycopersicum]
Solyc03g114930.3.1	2381	4518.10017810626	1154.95413193612	-1.96788070209168	8.74053339892611e-07	Down	1.01063566394033e-07	GO:0031977//thylakoid lumen;GO:0019898//extrinsic component of membrane;GO:0044425//membrane part;GO:0009507//chloroplast;GO:0009654//photosystem II oxygen evolving complex	GO:0005509//calcium ion binding	GO:0015979//photosynthesis	K02717//photosystem II oxygen-evolving enhancer protein 2	gi|460380645|ref|XP_004236065.1|//PREDICTED: psbP-like protein 1, chloroplastic [Solanum lycopersicum]
Solyc01g067290.2.1	1608	3686.11826253617	268.437802405248	-3.7794426013961	1.4645680552314e-10	Down	9.06756947867661e-12	NA	NA	NA	K19073//divinyl chlorophyllide a 8-vinyl-reductase [EC:1.3.1.75]	gi|723658083|ref|XP_010321210.1|//PREDICTED: divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic [Solanum lycopersicum]
Solyc04g051820.3.1	602	1379.32169724903	8073.37558094431	2.54921303495594	2.11488756154227e-06	Up	2.63927372746516e-07	NA	NA	NA	NA	gi|460383502|ref|XP_004237461.1|//PREDICTED: uncharacterized protein LOC101256083 [Solanum lycopersicum]
Solyc04g008010.3.1	3628	607.650776191047	1615.03354318321	1.41024979535077	2.36082364081955e-05	Up	3.63433786960815e-06	NA	NA	NA	K15305//vacuole morphology and inheritance protein 14	gi|565377170|ref|XP_006355062.1|//PREDICTED: protein VAC14 homolog isoform X2 [Solanum tuberosum];gi|971563993|ref|XP_015167654.1|//PREDICTED: protein VAC14 homolog isoform X1 [Solanum tuberosum];gi|971563996|ref|XP_015167655.1|//PREDICTED: protein VAC14 homolog isoform X3 [Solanum tuberosum];gi|723690192|ref|XP_010319386.1|//PREDICTED: protein VAC14 homolog isoform X1 [Solanum lycopersicum]
Solyc03g031670.3.1	2122	933.634730790696	4328.33657811911	2.2128825549547	3.78879491192323e-14	Up	1.39248240016263e-15	NA	GO:0046872//metal ion binding;GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process	K13412//calcium-dependent protein kinase [EC:2.7.11.1]	gi|350539856|ref|NP_001234806.1|//calcium-dependent protein kinase [Solanum lycopersicum];gi|661892170|emb|CDP04396.1|//unnamed protein product [Coffea canephora]
Solyc09g008650.3.1	1101	2785.64318876746	1034.02821754326	-1.4297349200781	1.12456084592837e-07	Down	1.10662018534773e-08	NA	GO:0016859//cis-trans isomerase activity	GO:0044267//cellular protein metabolic process	K01802//peptidylprolyl isomerase [EC:5.2.1.8]	gi|460402178|ref|XP_004246591.1|//PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP16-4, chloroplastic [Solanum lycopersicum]
Solyc06g075460.3.1	428	17.4696985654178	1.26081220342781	-3.79242940622216	0.00388487861912414	Down	0.00100771098518283	NA	NA	NA	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|723707323|ref|XP_010322388.1|//PREDICTED: protein NRT1/ PTR FAMILY 2.3-like [Solanum lycopersicum]
Solyc06g069395.1.1	246	8.34344417622856	0.734383804956326	-3.50603690247004	0.0152088608080883	Down	0.00470188950135248	NA	NA	NA	NA	gi|565354708|ref|XP_006344251.1|//PREDICTED: uncharacterized protein LOC102587464 [Solanum tuberosum]
Solyc02g093230.3.1	1999	479.119928102267	3314.82327360231	2.79047323053626	5.86274894604767e-10	Up	4.01004335619408e-11	NA	GO:0043169//cation binding;GO:0046872//metal ion binding;GO:0008171//O-methyltransferase activity;GO:0042409//caffeoyl-CoA O-methyltransferase activity	GO:0009699//phenylpropanoid biosynthetic process;GO:0009809//lignin biosynthetic process;GO:0006730//one-carbon metabolic process;GO:0032259//methylation	K00588//caffeoyl-CoA O-methyltransferase [EC:2.1.1.104]	gi|460372071|ref|XP_004231857.1|//PREDICTED: caffeoyl-CoA O-methyltransferase-like [Solanum lycopersicum]
Solyc09g011340.3.1	1558	984.048197848244	462.035168425274	-1.09072631079278	1.0033030810396e-05	Down	1.42671882144254e-06	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K07562//nonsense-mediated mRNA decay protein 3	gi|460401835|ref|XP_004246421.1|//PREDICTED: uncharacterized protein LOC101252515 [Solanum lycopersicum]
Solyc06g061055.1.1	2547	2617.35079551462	892.899593317357	-1.55153743902141	0.00246848644009954	Down	0.000604884071015893	NA	NA	GO:0046786//viral replication complex formation and maintenance	NA	gi|460392749|ref|XP_004241976.1|//PREDICTED: tobamovirus multiplication protein 2B [Solanum lycopersicum];gi|460392745|ref|XP_004241974.1|//PREDICTED: uncharacterized protein LOC101245175 [Solanum lycopersicum]
Solyc08g079680.3.1	1200	421.58696041703	172.35292347512	-1.29046447534178	0.0427732303928767	Down	0.0155624534764004	NA	NA	NA	NA	gi|460400342|ref|XP_004245694.1|//PREDICTED: uncharacterized protein ycf49 [Solanum lycopersicum]
Solyc02g080030.1.1	1839	0.80855048554169	39.0965118374629	5.59555822907576	1.08252969394424e-06	Up	1.28032902895671e-07	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|723674035|ref|XP_010316620.1|//PREDICTED: putative receptor-like protein kinase At4g00960 isoform X2 [Solanum lycopersicum];gi|723674041|ref|XP_010316622.1|//PREDICTED: putative receptor-like protein kinase At4g00960 isoform X2 [Solanum lycopersicum]
Solyc11g010930.2.1	671	57.088031294836	18.0523984662323	-1.66099778296194	0.00527215263814003	Down	0.00141826172616135	NA	NA	NA	K17279//receptor expression-enhancing protein 5/6	gi|460409479|ref|XP_004250166.1|//PREDICTED: HVA22-like protein e [Solanum lycopersicum]
Solyc07g008100.3.1	1880	133.746510578242	36.3538013839079	-1.87932311787401	0.000165327157853155	Down	3.05289525870184e-05	NA	NA	NA	K04498//E1A/CREB-binding protein [EC:2.3.1.48]	gi|460394363|ref|XP_004242773.1|//PREDICTED: uncharacterized protein LOC101245669 [Solanum lycopersicum]
Solyc10g008410.1.1	798	4029.22149253685	1100.89811148207	-1.87182016171059	0.00215288385448489	Down	0.000518399794989279	NA	NA	NA	K10666//E3 ubiquitin-protein ligase RNF5 [EC:2.3.2.27]	gi|460405397|ref|XP_004248162.1|//PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Solanum lycopersicum]
Solyc06g035860.2.1	880	110.738559984776	31.4126297533816	-1.8177410362304	3.26808579864239e-06	Down	4.23433212914901e-07	NA	NA	NA	NA	NA
Solyc04g081410.3.1	1005	604.009512964848	1590.35216017387	1.39670308770736	1.94180400981054e-06	Up	2.4090337206967e-07	NA	GO:0022892//substrate-specific transporter activity	GO:0006810//transport	K11827//AP-2 complex subunit sigma-1	gi|661888958|emb|CDP07401.1|//unnamed protein product [Coffea canephora]
Solyc09g090110.3.1	581	580.079953755748	2377.71058293905	2.03524945060054	3.17594407634503e-10	Up	2.0847016245876e-11	GO:0044464//cell part	GO:0008092//cytoskeletal protein binding	NA	K05765//cofilin	gi|460404523|ref|XP_004247731.1|//PREDICTED: actin-depolymerizing factor-like [Solanum lycopersicum]
Solyc10g083700.3.1	1830	5.68869985713021	107.240390830927	4.23660560737119	4.34783366110691e-10	Up	2.91227713173144e-11	NA	GO:0005506//iron ion binding;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K20618;K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30]	gi|460408054|ref|XP_004249463.1|//PREDICTED: cytochrome P450 76A2-like [Solanum lycopersicum]
Solyc06g053850.3.1	2007	29.3193907635595	83.5781925835643	1.51127143447216	0.0353604749627434	Up	0.0124541944208648	NA	NA	NA	K15271//ATP-dependent DNA helicase HFM1/MER3 [EC:3.6.4.12]	gi|460390841|ref|XP_004241033.1|//PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like [Solanum lycopersicum]
Solyc02g084630.3.1	1186	213.77417439286	844.87769546218	1.98265493726246	4.30387860885987e-06	Up	5.65658117445949e-07	GO:0043231//intracellular membrane-bounded organelle	GO:0003677//DNA binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0006351//transcription, DNA-templated	K09264//MADS-box transcription factor, plant	gi|460373289|ref|XP_004232453.1|//PREDICTED: floral homeotic protein DEFICIENS isoform X2 [Solanum lycopersicum]
Solyc07g052207.1.1	753	178.657788578518	3300.3641655993	4.20735450708454	7.7172088171818e-24	Up	9.80903610652673e-26	NA	NA	NA	K01180//endo-1,3(4)-beta-glucanase [EC:3.2.1.6];K01183//chitinase [EC:3.2.1.14]	gi|970038447|ref|XP_015080564.1|//PREDICTED: glycine-rich cell wall structural protein 1-like isoform X2 [Solanum pennellii];gi|723715788|ref|XP_010323835.1|//PREDICTED: glycine-rich cell wall structural protein 1-like [Solanum lycopersicum]
Solyc11g044593.1.1	3368	8.56510755592582	0.717608015498364	-3.57720345300138	0.0115427853036402	Down	0.0034312551362953	NA	NA	NA	K13412//calcium-dependent protein kinase [EC:2.7.11.1]	gi|969998956|ref|XP_015078996.1|//PREDICTED: uncharacterized protein LOC107022947 [Solanum pennellii]
Solyc06g069280.3.1	2905	229.811030494324	105.221411918988	-1.12701973208254	0.00126800462208061	Down	0.000288075449962029	NA	NA	NA	K18749//protein LSM14	gi|460392031|ref|XP_004241621.1|//PREDICTED: protein decapping 5-like isoform X1 [Solanum lycopersicum]
Solyc06g063345.1.1	1028	50.9245568618168	170.696961540499	1.7450039519363	4.57042224677041e-05	Up	7.40385234995683e-06	NA	NA	NA	NA	gi|460392637|ref|XP_004241922.1|//PREDICTED: reticulon-like protein B22 isoform X1 [Solanum lycopersicum]
Solyc08g005900.3.1	1262	334.660359293305	690.708630489399	1.04537957730417	0.000484737239868869	Up	9.94842419381986e-05	NA	NA	NA	NA	gi|460397787|ref|XP_004244448.1|//PREDICTED: trihelix transcription factor GT-3b-like [Solanum lycopersicum]
Solyc06g072460.1.1	1113	47.1948443702186	6360.62667634732	7.07439583661668	1.03295518494645e-24	Up	1.19358918791337e-26	NA	NA	NA	K03283//heat shock 70kDa protein 1/8;K16219//protein N-terminal methyltransferase [EC:2.1.1.244];K20393//PRA1 family protein 3	gi|723708138|ref|XP_004241463.2|//PREDICTED: uncharacterized protein LOC101268692 [Solanum lycopersicum]
Solyc09g009985.1.1	1616	55.2476808286385	834.276041983479	3.91653900608692	2.82537042629305e-07	Up	2.97407413294005e-08	NA	GO:0016706//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;GO:0046914//transition metal ion binding	GO:0008152//metabolic process	K06892//feruloyl-CoA ortho-hydroxylase [EC:1.14.11.-];K13229//2,4-dihydroxy-1,4-benzoxazin-3-one-glucoside dioxygenase [EC:1.14.20.2]	gi|460401988|ref|XP_004246497.1|//PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like [Solanum lycopersicum];gi|971539754|ref|XP_006341232.2|//PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like [Solanum tuberosum]
Solyc01g105450.3.1	2724	3262.9404054063	9280.8937963266	1.50809111258847	2.51741329656291e-05	Up	3.89134968720977e-06	NA	NA	NA	K05681//ATP-binding cassette, subfamily G (WHITE), member 2	gi|460369402|ref|XP_004230551.1|//PREDICTED: ABC transporter G family member 11-like [Solanum lycopersicum]
Solyc01g107520.3.1	905	106.267667516536	28.9465729778284	-1.87623825535051	0.00294168809611297	Down	0.000735860623714556	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460369768|ref|XP_004230729.1|//PREDICTED: uncharacterized protein LOC101249214 [Solanum lycopersicum]
Solyc01g106590.3.1	2005	162.710016079911	43.3883561925052	-1.90692322847549	0.00564295197910121	Down	0.00153406422024379	NA	NA	NA	NA	gi|698482570|ref|XP_009788192.1|//PREDICTED: protein trichome birefringence-like 13 isoform X1 [Nicotiana sylvestris];gi|460369644|ref|XP_004230667.1|//PREDICTED: protein trichome birefringence-like 13 isoform X1 [Solanum lycopersicum]
Solyc09g010360.3.1	2371	656.270153079486	14.9461501509605	-5.45644399526426	2.89570491347223e-15	Down	9.01264948095016e-17	NA	NA	NA	K07874//Ras-related protein Rab-1A;K00801//farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]	gi|460401940|ref|XP_004246473.1|//PREDICTED: WAT1-related protein At2g37460-like [Solanum lycopersicum]
Solyc07g018144.1.1	1590	1.48656185600492	25.6214036156613	4.10729811260261	0.00262000688230796	Up	0.000646798329414254	NA	NA	NA	K00430//peroxidase [EC:1.11.1.7];K17086//transmembrane 9 superfamily member 2/4;K14808//ATP-dependent RNA helicase DDX54/DBP10 [EC:3.6.4.13];K11275//histone H1/5;K01051//pectinesterase [EC:3.1.1.11]	gi|723721428|ref|XP_010324936.1|//PREDICTED: WW domain-binding protein 11-like [Solanum lycopersicum]
Solyc07g065250.3.1	1326	115.132544806888	2535.83993830141	4.46109607925628	8.26478433041401e-24	Up	1.05842338236289e-25	NA	NA	NA	K08867//WNK lysine deficient protein kinase [EC:2.7.11.1]	gi|460397013|ref|XP_004244063.1|//PREDICTED: probable serine/threonine-protein kinase WNK11 isoform X1 [Solanum lycopersicum]
Solyc07g052695.1.1	2695	2724.3197134001	574.742687080124	-2.24490791162993	9.35430118151154e-09	Down	7.67786312870449e-10	NA	NA	NA	K01177//beta-amylase [EC:3.2.1.2]	gi|460395758|ref|XP_004243448.1|//PREDICTED: beta-amylase [Solanum lycopersicum]
Solyc03g026100.1.1	2546	384.972163572247	110.701660801671	-1.79807726539419	0.00322016782792768	Down	0.000814764396003171	NA	GO:0008270//zinc ion binding;GO:0003824//catalytic activity	NA	K15442//tRNA-specific adenosine deaminase 3	gi|460377316|ref|XP_004234439.1|//PREDICTED: probable inactive tRNA-specific adenosine deaminase-like protein 3 [Solanum lycopersicum]
Solyc06g072710.3.1	2326	2082.21944007104	66.8272746462757	-4.9615412692502	6.1583625220897e-19	Down	1.27400149089004e-20	NA	NA	NA	K03086//RNA polymerase primary sigma factor	gi|460391676|ref|XP_004241445.1|//PREDICTED: RNA polymerase sigma factor sigA [Solanum lycopersicum]
Solyc02g067750.3.1	1143	73.3883396150638	333.84507355114	2.18555598873908	0.039497277717414	Up	0.0141629570464262	GO:0009532//plastid stroma	GO:0016836//hydro-lyase activity;GO:0046914//transition metal ion binding;GO:0004089//carbonate dehydratase activity;GO:0008270//zinc ion binding	GO:0015976//carbon utilization	K01673//carbonic anhydrase [EC:4.2.1.1]	gi|350540662|ref|NP_001233847.1|//carbonic anhydrase [Solanum lycopersicum]
Solyc09g092330.2.1	1347	1891.89110707921	6558.81612185499	1.7936063764412	9.1043363119642e-05	Up	1.57462801876822e-05	NA	NA	NA	K08679//UDP-glucuronate 4-epimerase [EC:5.1.3.6]	gi|460404830|ref|XP_004247883.1|//PREDICTED: UDP-glucuronate 4-epimerase 6 [Solanum lycopersicum]
Solyc06g076250.3.1	13153	1291.76567094726	392.798674838047	-1.71748241816579	8.9055407502848e-07	Down	1.03267252498715e-07	NA	NA	NA	K10955//intestinal mucin-2;K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6];K20100//YTH domain-containing protein 1;K10443//kelch-like protein 2/3	gi|970037594|ref|XP_015080145.1|//PREDICTED: adhesive plaque matrix protein-like isoform X1 [Solanum pennellii];gi|460391226|ref|XP_004241224.1|//PREDICTED: PGR5-like protein 1B, chloroplastic [Solanum lycopersicum];gi|971556507|ref|XP_015165696.1|//PREDICTED: uncharacterized protein LOC102597223 isoform X2 [Solanum tuberosum];gi|970037557|ref|XP_015080126.1|//PREDICTED: PGR5-like protein 1B, chloroplastic [Solanum pennellii]
Solyc01g108610.3.1	4323	134.084769937175	14.8080628546208	-3.17869054841507	0.000256628677505561	Down	4.94068554985918e-05	NA	NA	NA	NA	gi|460369947|ref|XP_004230818.1|//PREDICTED: cyclin-dependent kinase inhibitor 7 [Solanum lycopersicum]
Solyc02g086210.3.1	10576	405.987834545566	2240.39983924513	2.46424782716964	3.85003561809558e-05	Up	6.16654355559741e-06	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460373061|ref|XP_004232341.1|//PREDICTED: probable receptor-like protein kinase At1g67000 [Solanum lycopersicum]
Solyc02g078240.3.1	1467	887.886667711403	83.1062987892235	-3.41734580784043	6.25697827416322e-18	Down	1.43900238376275e-19	NA	NA	NA	K15637//serine/threonine-protein phosphatase PGAM5 [EC:3.1.3.16]	gi|460374149|ref|XP_004232874.1|//PREDICTED: probable 2-carboxy-D-arabinitol-1-phosphatase [Solanum lycopersicum]
Solyc05g005250.3.1	2748	235.289375097783	1210.37149671198	2.36294183901	8.66803069083646e-12	Up	4.41672802831871e-13	NA	GO:0032559//adenyl ribonucleotide binding;GO:0016301//kinase activity	GO:0009108//coenzyme biosynthetic process;GO:0006796//phosphate-containing compound metabolic process	K09680//type II pantothenate kinase [EC:2.7.1.33]	gi|350539199|ref|NP_001234124.1|//partially similar to pantothenate kinase family protein [Solanum lycopersicum]
Solyc08g006510.3.1	1646	863.932092023201	186.159815381764	-2.21437623103994	9.15016584321985e-09	Down	7.50349070190982e-10	GO:0016020//membrane	GO:0048037//cofactor binding	GO:0008152//metabolic process	K05387//glutamate receptor, ionotropic, plant	gi|460397884|ref|XP_004244495.1|//PREDICTED: uncharacterized protein At1g32220, chloroplastic [Solanum lycopersicum]
Solyc07g008540.3.1	2313	1694.49308978599	297.457893032451	-2.51009638770333	0.00192809462213435	Down	0.000459097526695774	NA	NA	NA	K12130//pseudo-response regulator 5;K12135//zinc finger protein CONSTANS;K12129//pseudo-response regulator 7	gi|723712976|ref|XP_010323337.1|//PREDICTED: protein CHLOROPLAST IMPORT APPARATUS 2 isoform X2 [Solanum lycopersicum];gi|460394426|ref|XP_004242804.1|//PREDICTED: protein CHLOROPLAST IMPORT APPARATUS 2 isoform X1 [Solanum lycopersicum]
Solyc08g080250.3.1	1893	476.64184401537	50.2216632921301	-3.24652389500406	3.80631654744312e-11	Down	2.15371571455891e-12	NA	NA	NA	K03952//NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8;K00700//1,4-alpha-glucan branching enzyme [EC:2.4.1.18]	gi|460400263|ref|XP_004245655.1|//PREDICTED: APO protein 1, chloroplastic [Solanum lycopersicum]
Solyc10g078950.2.1	2413	2166.07440936605	4383.31391465321	1.01693919885233	0.00351737863433297	Up	0.000901593037374281	NA	GO:0000175//3'-5'-exoribonuclease activity	NA	K12603//CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]	gi|723738121|ref|XP_010312071.1|//PREDICTED: carbon catabolite repressor protein 4 homolog 1-like [Solanum lycopersicum]
Solyc05g009530.3.1	1906	1534.87445988168	691.35092817912	-1.15063054940936	0.0127824074163112	Down	0.00385073120391484	NA	NA	NA	K00627//pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12]	gi|460386508|ref|XP_004238940.1|//PREDICTED: dihydrolipoyllysine-residue acetyltransferase component 4 of pyruvate dehydrogenase complex, chloroplastic [Solanum lycopersicum]
BGI_novel_G000382	1593	9.72827600086226	63.8120119573775	2.71357195694462	2.94383435745111e-06	Up	3.78438622075997e-07	NA	NA	NA	NA	gi|970007213|ref|XP_015064480.1|//PREDICTED: uncharacterized protein LOC107009650 [Solanum pennellii]
Solyc03g093340.3.1	1326	520.657563397753	147.405046175659	-1.82054890989904	1.24998639607941e-05	Down	1.80499750201717e-06	NA	NA	NA	NA	gi|460378834|ref|XP_004235173.1|//PREDICTED: uncharacterized protein LOC101263682 isoform X1 [Solanum lycopersicum];gi|565384645|ref|XP_006358240.1|//PREDICTED: uncharacterized protein LOC102592161 isoform X1 [Solanum tuberosum];gi|565384648|ref|XP_006358241.1|//PREDICTED: uncharacterized protein LOC102592161 isoform X2 [Solanum tuberosum]
Solyc09g063090.3.1	3160	556.32667139453	2827.47721698045	2.34551122143012	1.42280341772936e-05	Up	2.08530752889215e-06	NA	NA	NA	K09338//homeobox-leucine zipper protein	gi|460403267|ref|XP_004247114.1|//PREDICTED: uncharacterized protein LOC101266067 isoform X1 [Solanum lycopersicum];gi|723730192|ref|XP_010326332.1|//PREDICTED: uncharacterized protein LOC101266067 isoform X2 [Solanum lycopersicum]
Solyc06g060520.1.1	903	371.644028733773	131.164897896763	-1.50253974790575	0.00347029035544326	Down	0.000886328817485358	NA	NA	NA	NA	gi|460392826|ref|XP_004242014.1|//PREDICTED: uncharacterized protein LOC101256890 [Solanum lycopersicum]
Solyc07g053530.1.1	753	46.567739666234	5.35132312466398	-3.12136330765021	5.59827487449929e-06	Down	7.56439034592959e-07	GO:0031225//anchored component of membrane	NA	NA	K19519//transforming growth factor-beta-induced protein	gi|460396513|ref|XP_004243817.1|//PREDICTED: fasciclin-like arabinogalactan protein 9 [Solanum lycopersicum]
Solyc12g006620.2.1	1826	34.665395533664	4.52458886963144	-2.93763761020257	0.00244250729266178	Down	0.000597061384571193	NA	NA	NA	NA	gi|723747336|ref|XP_010313699.1|//PREDICTED: zinc finger CCCH domain-containing protein 32-like [Solanum lycopersicum]
Solyc06g060450.3.1	1300	1.6452447861547	8.79594228956832	2.41853588874301	0.0430892230561747	Up	0.0156966966202473	GO:0016020//membrane	NA	NA	K20352//p24 family protein delta-1	gi|970035278|ref|XP_015078970.1|//PREDICTED: transmembrane emp24 domain-containing protein p24delta4-like [Solanum pennellii]
Solyc04g078650.3.1	1866	262.76860431875	29.7424190386724	-3.14319901634998	1.07276280297279e-07	Down	1.05204969979924e-08	GO:0043231//intracellular membrane-bounded organelle;GO:0005634//nucleus	GO:0003677//DNA binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0001944//vasculature development;GO:0010067//procambium histogenesis;GO:0051301//cell division;GO:0006351//transcription, DNA-templated	K18490//homeobox protein OTX2;K09326	gi|350536525|ref|NP_001234251.1|//WOX4 [Solanum lycopersicum]
Solyc07g065660.3.1	2492	53.8329914830714	228.949957028641	2.08846979140858	0.00250092959535522	Up	0.000614139114887439	GO:0016020//membrane	GO:0016757//transferase activity, transferring glycosyl groups	GO:0009987//cellular process	K10999//cellulose synthase A [EC:2.4.1.12]	gi|723717976|ref|XP_010324247.1|//PREDICTED: cellulose synthase-like protein E1 [Solanum lycopersicum]
Solyc08g013840.3.1	1448	1489.80747581305	52.160185664451	-4.83603309168698	1.71105467485198e-36	Down	7.58966401921073e-39	NA	GO:0003824//catalytic activity	NA	K20884;K03456//serine/threonine-protein phosphatase 2A regulatory subunit A	gi|460398381|ref|XP_004244740.1|//PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein Sgpp [Solanum lycopersicum]
Solyc08g083505.1.1	1853	13.1252017930641	1.21021663391125	-3.43900237936427	0.0117179821649305	Down	0.00349076015588656	NA	NA	NA	K13083//flavonoid 3',5'-hydroxylase [EC:1.14.13.88];K20770;K20562//null;K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30]	gi|565405190|ref|XP_006367995.1|//PREDICTED: ferruginol synthase-like [Solanum tuberosum]
Solyc10g012430.3.1	2583	214.001376442408	1403.36506564885	2.71319837348211	7.42094420903621e-17	Up	1.93075110254483e-18	GO:0031224//intrinsic component of membrane	GO:0004175//endopeptidase activity	NA	K09597//signal peptide peptidase-like 2B [EC:3.4.23.-]	gi|723733589|ref|XP_010326969.1|//PREDICTED: signal peptide peptidase-like 4 isoform X2 [Solanum lycopersicum];gi|460405162|ref|XP_004248045.1|//PREDICTED: signal peptide peptidase-like 4 isoform X1 [Solanum lycopersicum]
Solyc02g070970.1.1	910	16696.6154732912	1389.00298638375	-3.5874340811863	8.64535979871873e-05	Down	1.48944583978224e-05	GO:0009521//photosystem;GO:0010287//plastoglobule;GO:0009535//chloroplast thylakoid membrane;GO:0009523//photosystem II;GO:0009534//chloroplast thylakoid;GO:0031224//intrinsic component of membrane;GO:0016021//integral component of membrane;GO:0009941//chloroplast envelope;GO:0009522//photosystem I	GO:0043169//cation binding;GO:0031409//pigment binding;GO:0046872//metal ion binding;GO:0046906//tetrapyrrole binding;GO:0016168//chlorophyll binding	GO:0009768//photosynthesis, light harvesting in photosystem I;GO:0006464//cellular protein modification process;GO:0006091//generation of precursor metabolites and energy;GO:0009416//response to light stimulus;GO:0018298//protein-chromophore linkage	K08912//light-harvesting complex II chlorophyll a/b binding protein 1	gi|970007787|ref|XP_015064801.1|//PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like [Solanum pennellii];gi|460374596|ref|XP_004233096.1|//PREDICTED: chlorophyll a-b binding protein 1C, chloroplastic [Solanum lycopersicum]
Solyc06g068490.3.1	2318	553.659579150838	209.177266464552	-1.404273132362	0.000151776133771076	Down	2.77645138949882e-05	NA	NA	NA	K16075//magnesium transporter	gi|460392144|ref|XP_004241677.1|//PREDICTED: magnesium transporter MRS2-1 [Solanum lycopersicum]
Solyc08g078800.1.1	1425	571.902029058232	167.536802018148	-1.7712899837163	0.000588158382841337	Down	0.000123469716055135	NA	NA	NA	K14494//DELLA protein	gi|460400469|ref|XP_004245757.1|//PREDICTED: scarecrow-like protein 22 isoform X2 [Solanum lycopersicum]
Solyc09g075030.3.1	1075	963.038483283738	1947.47960160732	1.01594286238874	0.00111018788579013	Up	0.000249572951364257	NA	NA	NA	K14839//nucleolar protein 16	gi|460403904|ref|XP_004247426.1|//PREDICTED: uncharacterized protein LOC101248915 [Solanum lycopersicum]
Solyc09g074610.3.1	1687	1223.21527978801	54.1033602620655	-4.49881632309696	2.02743863428027e-20	Down	3.55737060767179e-22	NA	GO:0005515//protein binding	NA	K03686//molecular chaperone DnaJ;K04078//chaperonin GroES	gi|460403959|ref|XP_004247453.1|//PREDICTED: uncharacterized protein LOC101257008 [Solanum lycopersicum]
Solyc04g005130.3.1	3491	141.462103572755	50.4737311521431	-1.48681097623276	0.00092075515942969	Down	0.000203109774619983	NA	NA	NA	K11253//histone H3;K07953//GTP-binding protein SAR1 [EC:3.6.5.-];K12126//phytochrome-interacting factor 3	gi|460382692|ref|XP_004237071.1|//PREDICTED: transcription factor bHLH79-like isoform X2 [Solanum lycopersicum]
Solyc01g079230.3.1	818	4.0246187937135	0.359204069980943	-3.48597653781597	0.0432652256552216	Down	0.0157769383698014	NA	NA	NA	NA	gi|723658587|ref|XP_010322317.1|//PREDICTED: uncharacterized protein LOC101262656 isoform X2 [Solanum lycopersicum]
Solyc05g012140.3.1	1819	503.946070423338	165.000457247288	-1.61079933012703	0.0197357782908413	Down	0.00633754771043676	NA	NA	NA	NA	gi|460386708|ref|XP_004239038.1|//PREDICTED: pentatricopeptide repeat-containing protein At2g30100, chloroplastic [Solanum lycopersicum]
Solyc03g006980.3.1	1476	786.040154522283	119.735738440649	-2.71474918505085	9.43450289031924e-07	Down	1.09895711690203e-07	NA	GO:0015928//fucosidase activity;GO:0043167//ion binding	GO:0044238//primary metabolic process	K01206//alpha-L-fucosidase [EC:3.2.1.51]	gi|723679031|ref|XP_010317463.1|//PREDICTED: alpha-L-fucosidase 1 [Solanum lycopersicum]
Solyc08g075870.3.1	2438	1127.52815937398	2822.57672740008	1.32384933455547	0.000227457779574232	Up	4.32312217850383e-05	GO:0005774//vacuolar membrane;GO:0005768//endosome;GO:0016021//integral component of membrane;GO:0005802//trans-Golgi network	GO:0008757//S-adenosylmethionine-dependent methyltransferase activity	GO:0032259//methylation	K16302//metal transporter CNNM;K15449//tRNA wybutosine-synthesizing protein 1 [EC:4.1.3.44]	gi|460400802|ref|XP_004245921.1|//PREDICTED: probable methyltransferase PMT21 [Solanum lycopersicum]
Solyc12g011160.2.1	1753	1256.83987688404	5003.17482452716	1.99304300474928	1.00123253281797e-09	Up	7.09461400360426e-11	NA	NA	NA	K05605//3-hydroxyisobutyryl-CoA hydrolase [EC:3.1.2.4]	gi|460412872|ref|XP_004251820.1|//PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 [Solanum lycopersicum]
Solyc08g083170.1.1	1164	4.92985296071561	176.885266825411	5.16512546048244	2.10984046632268e-07	Up	2.1768444948491e-08	NA	NA	NA	K13422//transcription factor MYC2	gi|460401137|ref|XP_004246085.1|//PREDICTED: transcription factor bHLH14-like [Solanum lycopersicum]
Solyc06g069330.3.1	1656	150.5022559525	323.281288260494	1.10300489330214	0.00143055612692434	Up	0.000329164416710301	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process	K08856//serine/threonine kinase 16 [EC:2.7.11.1]	gi|460392023|ref|XP_004241617.1|//PREDICTED: probable serine/threonine-protein kinase DDB_G0291350 [Solanum lycopersicum]
Solyc06g066370.3.1	2026	3633.80405758382	24737.2114549344	2.76713034557152	2.16317083999871e-06	Up	2.70356039455631e-07	NA	GO:0003677//DNA binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0010467//gene expression	K13424//WRKY transcription factor 33	gi|987437813|ref|NP_001306910.1|//defense-related WRKY1 [Solanum lycopersicum]
Solyc02g086780.3.1	904	178.504951122055	70.7179224173729	-1.33581629395078	0.0167821510051592	Down	0.00524770630618312	NA	NA	NA	K11877//proteasome assembly chaperone 3	gi|460372977|ref|XP_004232299.1|//PREDICTED: uncharacterized protein LOC101251837 [Solanum lycopersicum]
Solyc08g074560.3.1	2953	5098.80953950676	632.839037577761	-3.01024994629879	3.61964065474895e-12	Down	1.74856653069727e-13	NA	GO:0032559//adenyl ribonucleotide binding;GO:0016301//kinase activity	GO:0006464//cellular protein modification process	K08869//aarF domain-containing kinase	gi|970414563|ref|NP_001305094.1|//aarF domain-containing protein kinase [Solanum lycopersicum]
Solyc03g006870.3.1	2714	2804.40787140801	902.352655320513	-1.63593290986747	1.029198081977e-11	Down	5.30974492766467e-13	GO:0009536//plastid	GO:0046872//metal ion binding;GO:0016868//intramolecular transferase activity, phosphotransferases	GO:0019318//hexose metabolic process	K01835//phosphoglucomutase [EC:5.4.2.2]	gi|460376718|ref|XP_004234144.1|//PREDICTED: phosphoglucomutase, chloroplastic [Solanum lycopersicum]
Solyc07g045530.2.1	630	63.2450840290733	348.203603827567	2.4609058844532	0.00350525288852223	Up	0.000897479576981482	NA	NA	NA	NA	gi|723716158|ref|XP_010323892.1|//PREDICTED: uncharacterized protein LOC104648416 [Solanum lycopersicum]
Solyc01g106420.3.1	1715	310.894621697967	636.102936728131	1.03283458801627	0.00694072586235825	Up	0.00193645941105381	NA	NA	GO:0006810//transport	K08145//MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8	gi|460369616|ref|XP_004230653.1|//PREDICTED: probable sphingolipid transporter spinster homolog 2 isoform X1 [Solanum lycopersicum]
Solyc12g100230.1.1	472	48.5651179087786	1708.63247245326	5.13677783158966	2.02472850710414e-19	Up	4.01504236536232e-21	GO:0016021//integral component of membrane	GO:0016705//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen;GO:0016717//oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	GO:0044238//primary metabolic process;GO:0055114//oxidation-reduction process;GO:0006629//lipid metabolic process	K10256//omega-6 fatty acid desaturase / acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.6 1.14.19.22]	gi|723752671|ref|XP_010314672.1|//PREDICTED: omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 1-like isoform X1 [Solanum lycopersicum];gi|723752674|ref|XP_004252861.2|//PREDICTED: omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 1-like isoform X2 [Solanum lycopersicum]
Solyc01g097460.3.1	1189	15950.7025016986	2104.8952352515	-2.92179963020186	3.40569351802536e-18	Down	7.57864555785427e-20	NA	GO:0016861//intramolecular oxidoreductase activity, interconverting aldoses and ketoses	GO:0006098//pentose-phosphate shunt	K01807//ribose 5-phosphate isomerase A [EC:5.3.1.6]	gi|565362046|ref|XP_006347763.1|//PREDICTED: probable ribose-5-phosphate isomerase 3, chloroplastic [Solanum tuberosum]
Solyc11g069430.2.1	1395	5012.11018343816	645.263933326656	-2.95745683621153	8.33580443641678e-09	Down	6.78596872265329e-10	GO:0031224//intrinsic component of membrane	NA	GO:0006810//transport	K09872//aquaporin PIP	gi|970062901|ref|XP_015058362.1|//PREDICTED: probable aquaporin PIP2-1 [Solanum pennellii]
Solyc04g054310.3.1	1831	608.091476914446	283.23175180106	-1.10230536032279	0.00943323252470246	Down	0.00274086952177038	NA	GO:0008483//transaminase activity;GO:0048037//cofactor binding	NA	K00827//alanine-glyoxylate transaminase / (R)-3-amino-2-methylpropionate-pyruvate transaminase [EC:2.6.1.44 2.6.1.40]	gi|460383444|ref|XP_004237433.1|//PREDICTED: alanine--glyoxylate aminotransferase 2 homolog 1, mitochondrial isoform X1 [Solanum lycopersicum]
Solyc12g008690.2.1	1789	815.218920008622	179.040700521668	-2.1868999484975	9.29100345472964e-12	Down	4.75147485458814e-13	NA	GO:0016787//hydrolase activity;GO:0003824//catalytic activity	GO:0008152//metabolic process	K14664//IAA-amino acid hydrolase [EC:3.5.1.-]	gi|460412534|ref|XP_004251653.1|//PREDICTED: IAA-amino acid hydrolase ILR1-like 4 [Solanum lycopersicum];gi|590576345|ref|XP_007012935.1|//Peptidase M20/M25/M40 family protein isoform 1 [Theobroma cacao]
Solyc04g018120.1.1	2766	70.032885501181	242.125123173717	1.78964834689107	8.05404034421553e-07	Up	9.22705655750572e-08	NA	NA	NA	K18443//golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1	gi|460381652|ref|XP_004236559.1|//PREDICTED: uncharacterized protein LOC101251767 [Solanum lycopersicum]
Solyc12g005070.2.1	2297	522.443057284618	173.648322259933	-1.58910532999929	1.15293454209587e-05	Down	1.65496903295483e-06	NA	NA	NA	K02115//F-type H+-transporting ATPase subunit gamma	gi|460412146|ref|XP_004251463.1|//PREDICTED: ATP synthase gamma chain, chloroplastic-like [Solanum lycopersicum]
Solyc09g092170.2.1	2569	421.020013207059	138.024114907483	-1.60896846375854	1.36318967611929e-05	Down	1.98726510485408e-06	GO:0005774//vacuolar membrane;GO:0009505//plant-type cell wall;GO:0016021//integral component of membrane	GO:0030246//carbohydrate binding;GO:0004565//beta-galactosidase activity	GO:0005975//carbohydrate metabolic process	K12309//beta-galactosidase [EC:3.2.1.23]	gi|7939617|gb|AAF70821.1|AF154420_1//beta-galactosidase [Solanum lycopersicum];gi|802083972|ref|NP_001234298.2|//beta-galactosidase [Solanum lycopersicum]
Solyc07g055260.3.1	1391	4620.19225550738	240.779943853156	-4.26216575569136	5.6484814607976e-37	Down	2.29493245574377e-39	NA	GO:0005515//protein binding;GO:0046914//transition metal ion binding	GO:0044267//cellular protein metabolic process	K05337//ferredoxin;K08244//alpha-glucan, water dikinase [EC:2.7.9.4]	gi|460395400|ref|XP_004243271.1|//PREDICTED: uncharacterized protein LOC101268200 [Solanum lycopersicum]
Solyc06g082160.3.1	1310	243.36018268567	586.457192430434	1.26893266354249	4.64192136365025e-05	Up	7.53005880967865e-06	GO:0005634//nucleus	NA	NA	K11363//SAGA-associated factor 11	gi|460393826|ref|XP_004242509.1|//PREDICTED: ataxin-7-like protein 3 [Solanum lycopersicum]
Solyc04g064870.3.1	943	378.783463848511	6550.07851931777	4.11206694604306	2.25520533725075e-13	Up	9.12909272496764e-15	NA	NA	NA	NA	gi|460384084|ref|XP_004237744.1|//PREDICTED: pathogen-related protein [Solanum lycopersicum]
Solyc11g013780.1.1	216	31.0036360235939	227.546272637844	2.8756506282232	0.0124793693084655	Up	0.00374967183522961	GO:0031224//intrinsic component of membrane;GO:0009521//photosystem;GO:0009534//chloroplast thylakoid;GO:0042716//plasma membrane-derived chromatophore	GO:0009055//electron carrier activity;GO:0046914//transition metal ion binding	GO:0009767//photosynthetic electron transport chain;GO:0006950//response to stress;GO:0051234//establishment of localization	K02703//photosystem II P680 reaction center D1 protein [EC:1.10.3.9]	gi|46852067|gb|AAT02727.1|//photosystem II 32 kDa protein (chloroplast) [Frullania moniliata]
Solyc02g082920.3.1	961	8447.73415707207	50102.0950993995	2.56823459313578	0.000349189706626053	Up	6.92314018765459e-05	GO:0044421//extracellular region part	GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds	GO:0006950//response to stress;GO:0006026//aminoglycan catabolic process	K20547	gi|350534584|ref|NP_001234404.1|//acidic 26 kDa endochitinase precursor [Solanum lycopersicum]
Solyc11g007500.2.1	588	112.006159400115	867.007460881001	2.95246633775895	5.10741439711006e-05	Up	8.37542164320834e-06	NA	NA	NA	K13080//flavanone 7-O-glucoside 2''-O-beta-L-rhamnosyltransferase [EC:2.4.1.236];K18823//soyasaponin III rhamnosyltransferase [EC:2.4.1.273]	gi|460409136|ref|XP_004249996.1|//PREDICTED: crocetin glucoside glucosyltransferase-like [Solanum lycopersicum]
Solyc07g063820.3.1	3367	383.890529421037	128.773998148049	-1.57585365329198	0.0412024501350919	Down	0.0148772973929713	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723719109|ref|XP_004244166.2|//PREDICTED: uncharacterized protein LOC101262029 [Solanum lycopersicum]
Solyc07g054140.3.1	3869	54.5784462659548	9.84779659355276	-2.47045845634457	0.000441574289141319	Down	8.97863332065712e-05	NA	NA	GO:0006810//transport	K08490//syntaxin 5	gi|723715211|ref|XP_010323733.1|//PREDICTED: syntaxin-31 isoform X2 [Solanum lycopersicum]
Solyc12g056740.2.1	3134	1888.02743985031	889.060590250412	-1.08652608397939	4.10331163095732e-05	Down	6.60433115494026e-06	NA	NA	NA	K13179//ATP-dependent RNA helicase DDX18/HAS1 [EC:3.6.4.13]	gi|460414406|ref|XP_004252562.1|//PREDICTED: DEAD-box ATP-dependent RNA helicase 39 [Solanum lycopersicum]
Solyc02g086260.1.1	462	80.0093807168466	204.345421709297	1.35276885650562	0.00033130777608939	Up	6.54143913055576e-05	NA	NA	NA	NA	gi|723671937|ref|XP_010316318.1|//PREDICTED: uncharacterized protein LOC104645727 [Solanum lycopersicum]
Solyc02g084570.3.1	2109	1361.75276141715	549.638568794744	-1.30890964428189	0.0110964094010585	Down	0.00328532801075771	NA	GO:0005506//iron ion binding;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K09755//ferulate-5-hydroxylase [EC:1.14.-.-]	gi|460373299|ref|XP_004232458.1|//PREDICTED: cytochrome P450 84A1 [Solanum lycopersicum]
Solyc09g018010.3.1	1539	4638.05684356312	1103.2168040574	-2.0718041645407	0.00624742243302269	Down	0.00172160407213869	NA	NA	GO:0050896//response to stimulus	NA	gi|460401532|ref|XP_004246276.1|//PREDICTED: non-specific lipid-transfer protein 1-like [Solanum lycopersicum]
Solyc08g076860.3.1	1428	2511.79808715677	16517.1809742771	2.71717507780642	5.35386993264394e-15	Up	1.71623980247271e-16	NA	NA	NA	NA	gi|970043583|ref|XP_015083190.1|//PREDICTED: uncharacterized protein LOC107026660 [Solanum pennellii]
Solyc04g040120.1.1	1128	3.22036799435011	163.574011638702	5.66657418750078	2.35020013577781e-11	Up	1.28863292072803e-12	NA	GO:0016705//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	GO:0044238//primary metabolic process	K10256//omega-6 fatty acid desaturase / acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.6 1.14.19.22]	gi|460383235|ref|XP_004237336.1|//PREDICTED: omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 1-like [Solanum lycopersicum]
Solyc07g008620.1.1	3096	219.696688470438	2614.28374533914	3.57283070575074	4.07712806386732e-07	Up	4.433048517333e-08	NA	GO:0004871//signal transducer activity	NA	K04567//lysyl-tRNA synthetase, class II [EC:6.1.1.6];K13466//EIX receptor 1/2;K13465	gi|350535018|ref|NP_001234427.1|//EIX receptor 1 precursor [Solanum lycopersicum]
Solyc01g099660.3.1	3812	16.3095239596255	45.2086022328393	1.47088263939939	0.0420046730028986	Up	0.0152372245928182	NA	GO:0005524//ATP binding	NA	K09490//heat shock 70kDa protein 5	gi|460368761|ref|XP_004230233.1|//PREDICTED: mediator of RNA polymerase II transcription subunit 37a [Solanum lycopersicum];gi|969998120|ref|XP_015071211.1|//PREDICTED: mediator of RNA polymerase II transcription subunit 37a [Solanum pennellii]
Solyc11g006640.2.1	3777	162.131012635098	71.600691986996	-1.1791146422342	0.00403188242419661	Down	0.0010503513591289	NA	NA	NA	K13457//disease resistance protein RPM1	gi|723740748|ref|XP_010312513.1|//PREDICTED: putative late blight resistance protein homolog R1A-3 [Solanum lycopersicum]
Solyc01g111520.3.1	2107	1890.59655167576	4173.19399432928	1.14231045820633	0.00170610441179627	Up	0.000400198116275307	NA	NA	NA	K19907;K19938//rabphilin-3A;K01652//acetolactate synthase I/II/III large subunit [EC:2.2.1.6];K03511//DNA polymerase kappa [EC:2.7.7.7]	gi|460370391|ref|XP_004231036.1|//PREDICTED: synaptotagmin-1 [Solanum lycopersicum]
Solyc10g050960.2.1	295	2.2955638298959	42.7313368054663	4.21837399798808	8.16892099964007e-06	Up	1.14671822292547e-06	NA	NA	NA	NA	gi|460406569|ref|XP_004248735.1|//PREDICTED: ethylene-responsive transcription factor ERF109-like [Solanum lycopersicum]
Solyc01g094260.3.1	1171	0.462734177716386	53.7672131918388	6.86039922618196	6.31345921298263e-08	Up	5.94916687431791e-09	NA	GO:0016616//oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	GO:0008152//metabolic process;GO:0006950//response to stress	K15095//(+)-neomenthol dehydrogenase [EC:1.1.1.208]	gi|723660961|ref|XP_010326206.1|//PREDICTED: (+)-neomenthol dehydrogenase [Solanum lycopersicum]
Solyc10g006400.3.1	1869	3116.29555984254	563.048561158539	-2.46850080921699	5.55404871053487e-13	Down	2.37870954540203e-14	NA	NA	NA	K01696//tryptophan synthase beta chain [EC:4.2.1.20]	gi|460405699|ref|XP_004248313.1|//PREDICTED: tryptophan synthase beta chain 1 [Solanum lycopersicum]
Solyc01g005300.3.1	2119	188.702350076351	1689.00486051654	3.161989184533	6.65683179654031e-15	Up	2.1711375510559e-16	NA	NA	GO:0023052//signaling;GO:0006351//transcription, DNA-templated	K12116//flavin-binding kelch repeat F-box protein 1	gi|460365707|ref|XP_004228739.1|//PREDICTED: adagio protein 3 [Solanum lycopersicum]
Solyc02g072080.1.1	2175	1408.3781869427	7463.9908647528	2.40591243253535	1.95997735996677e-07	Up	2.01126348292401e-08	GO:0043234//protein complex	GO:0019787//ubiquitin-like protein transferase activity	GO:0032446//protein modification by small protein conjugation	K08332//vacuolar protein 8	gi|460374471|ref|XP_004233034.1|//PREDICTED: U-box domain-containing protein 17 [Solanum lycopersicum]
Solyc01g074030.3.1	2003	6649.56076763838	1212.10580376386	-2.45574341146458	8.73261468842523e-15	Down	2.90023844020683e-16	NA	GO:0043167//ion binding;GO:0016798//hydrolase activity, acting on glycosyl bonds	GO:0044238//primary metabolic process	K01188//beta-glucosidase [EC:3.2.1.21]	gi|350534724|ref|NP_001234412.1|//beta-glucosidase 01 precursor [Solanum lycopersicum]
Solyc05g015740.2.1	1007	38.9787024903784	10.284743345234	-1.92218027546135	0.00169122547741784	Down	0.000396140632924321	NA	NA	NA	NA	NA
Solyc02g087100.1.1	294	0.398544058619829	14.5339931537553	5.18854810020024	0.000332769894446061	Up	6.57278839522022e-05	NA	GO:0016209//antioxidant activity;GO:0005506//iron ion binding	GO:0008152//metabolic process;GO:0006950//response to stress	K10529//alpha-dioxygenase [EC:1.-.-.-]	gi|565342813|ref|XP_006338535.1|//PREDICTED: alpha-dioxygenase 1-like [Solanum tuberosum]
Solyc04g016460.3.1	640	11.2078502200975	73.9367094166219	2.72178125615691	1.60636629990799e-06	Up	1.96634371883772e-07	NA	NA	NA	NA	NA
Solyc08g007680.1.1	2238	110.319585975255	5.55611640176022	-4.31146831298763	8.46390729314047e-11	Down	5.04465027647667e-12	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13199//plasminogen activator inhibitor 1 RNA-binding protein;K01183//chitinase [EC:3.2.1.14]	gi|970046434|ref|XP_015084725.1|//PREDICTED: subtilisin-like protease SBT1.7 [Solanum pennellii]
Solyc05g052350.3.1	2958	633.406327963157	62.8745199581368	-3.33258389528124	1.79051051558638e-06	Down	2.20910608565339e-07	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K20359//PRA1 family protein 1	gi|460388610|ref|XP_004239960.1|//PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase IMK2 [Solanum lycopersicum]
Solyc02g072260.3.1	1117	473.539714514601	63.6919858157095	-2.89430166702289	2.66702763787677e-10	Down	1.71784097146677e-11	NA	NA	NA	NA	gi|460374541|ref|XP_004233069.1|//PREDICTED: SAP-like protein BP-73 [Solanum lycopersicum]
Solyc03g119830.3.1	2650	174.117354488488	409.542684421916	1.2339538186893	2.69720354039107e-05	Up	4.19540419489039e-06	NA	GO:0005515//protein binding;GO:0003676//nucleic acid binding	NA	K00872//homoserine kinase [EC:2.7.1.39];K10398//kinesin family member 11;K18749//protein LSM14;K11593//eukaryotic translation initiation factor 2C	gi|723685489|ref|XP_010318584.1|//PREDICTED: putative AC transposase [Solanum lycopersicum];gi|971540540|ref|XP_015161727.1|//PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2 [Solanum tuberosum];gi|723685480|ref|XP_004236414.2|//PREDICTED: protein decapping 5-like isoform X1 [Solanum lycopersicum]
BGI_novel_G000479	2991	0.518040167177101	145.020686959342	8.12897903341929	3.97529449104949e-12	Up	1.92926547910632e-13	NA	NA	NA	K10406//kinesin family member C2/C3	gi|970067161|ref|XP_015060661.1|//PREDICTED: receptor-like protein 12 [Solanum pennellii]
Solyc02g087990.3.1	2157	2.40462333787674	21.2133457582611	3.14108934805295	0.000598742856493056	Up	0.000126207352522299	NA	NA	NA	NA	gi|723671416|ref|XP_004233680.2|//PREDICTED: uncharacterized protein LOC101244638 isoform X1 [Solanum lycopersicum]
Solyc11g070110.2.1	2037	203.719758335698	608.125556297896	1.57778330869554	8.22902129472284e-05	Up	1.40882267804764e-05	NA	NA	NA	K12471//epsin	gi|723745999|ref|XP_010313445.1|//PREDICTED: clathrin interactor EPSIN 1-like [Solanum lycopersicum]
Solyc03g080160.3.1	900	5061.94461889501	2046.50934013637	-1.30652647231042	0.0119708165323103	Down	0.0035763416768476	NA	NA	NA	K03626//nascent polypeptide-associated complex subunit alpha	gi|460378547|ref|XP_004235032.1|//PREDICTED: nascent polypeptide-associated complex subunit alpha-like protein 2 [Solanum lycopersicum]
Solyc03g082380.3.1	1564	2336.11925835774	5046.6832338704	1.11122161021102	0.00545799861317343	Up	0.00147551937295319	NA	GO:0000166//nucleotide binding;GO:0005488//binding;GO:0003676//nucleic acid binding	NA	K12890//splicing factor, arginine/serine-rich 1/9	gi|970018527|ref|XP_015070435.1|//PREDICTED: serine/arginine-rich splicing factor SR34A isoform X2 [Solanum pennellii];gi|460378513|ref|XP_004235015.1|//PREDICTED: serine/arginine-rich splicing factor SR34A [Solanum lycopersicum]
Solyc09g075930.2.1	2162	9.28830517521434	32.0666769746387	1.78758757795991	0.00860614322232823	Up	0.00246590960750101	NA	NA	NA	K00276//primary-amine oxidase [EC:1.4.3.21]	gi|723731801|ref|XP_010326653.1|//PREDICTED: uncharacterized protein LOC101254423 [Solanum lycopersicum]
Solyc01g106820.3.1	2050	255.200980443955	44.1450255658614	-2.53131108810644	0.000167995865934882	Down	3.10906319653605e-05	NA	GO:0016787//hydrolase activity	NA	NA	gi|460369668|ref|XP_004230679.1|//PREDICTED: probable zinc metallopeptidase EGY3, chloroplastic [Solanum lycopersicum]
Solyc11g006250.2.1	1460	2202.48247205364	224.56922477022	-3.29389840005958	0.000336761404909366	Down	6.66041454617972e-05	NA	GO:0016787//hydrolase activity	GO:0044238//primary metabolic process	K21026;K01188//beta-glucosidase [EC:3.2.1.21];K00679//phospholipid:diacylglycerol acyltransferase [EC:2.3.1.158];K10960//geranylgeranyl reductase [EC:1.3.1.83]	gi|999808283|ref|NP_001307298.1|//GDSL esterase/lipase precursor [Solanum lycopersicum]
BGI_novel_G000481	834	1.19388903220584	16.5747341676675	3.79524507748563	0.00327093843377932	Up	0.000828463793705475	NA	NA	NA	NA	gi|971554948|ref|XP_015165308.1|//PREDICTED: uncharacterized protein LOC107061081 [Solanum tuberosum]
Solyc05g054600.3.1	2649	930.195291775128	215.21074422992	-2.11178353248948	8.51241208043932e-09	Down	6.94877831227155e-10	GO:0009536//plastid	GO:0032559//adenyl ribonucleotide binding;GO:0004812//aminoacyl-tRNA ligase activity	GO:0003006//developmental process involved in reproduction;GO:0006418//tRNA aminoacylation for protein translation	K01874//methionyl-tRNA synthetase [EC:6.1.1.10]	gi|460388247|ref|XP_004239780.1|//PREDICTED: probable methionine--tRNA ligase, mitochondrial [Solanum lycopersicum]
Solyc00g007200.3.1	2523	133.542031549499	527.320481424551	1.98138613993865	2.18428072125353e-08	Up	1.88971058372947e-09	NA	NA	NA	K08472//mlo protein	gi|460415805|ref|XP_004253244.1|//PREDICTED: MLO-like protein 9 [Solanum lycopersicum]
Solyc05g016180.3.1	3444	30.8943019661474	225.810672893659	2.86970099410143	1.32223699229193e-12	Up	5.99314217469432e-14	NA	NA	NA	K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|971578596|ref|XP_015158764.1|//PREDICTED: uncharacterized protein LOC107058020 [Solanum tuberosum]
Solyc12g057150.1.1	348	197.603648478088	1941.50202128295	3.29649171957612	3.25738149351635e-20	Up	5.91301918645618e-22	NA	NA	NA	NA	NA
Solyc03g082530.1.1	369	42.2498218408084	976.920213484424	4.53122357701287	1.02796344399406e-11	Up	5.29538347845455e-13	NA	NA	NA	K14488//SAUR family protein	gi|971550773|ref|XP_015164315.1|//PREDICTED: auxin-responsive protein SAUR32-like [Solanum tuberosum]
Solyc03g118190.3.1	738	3.43436863673885	29.0741827854868	3.08162183300084	0.000263673929368452	Up	5.09204796502888e-05	NA	NA	NA	K09286//EREBP-like factor	gi|460380203|ref|XP_004235847.1|//PREDICTED: ethylene-responsive transcription factor ERF114 [Solanum lycopersicum]
Solyc03g114680.3.1	4429	409.623826802853	1233.28214142586	1.59013134601736	1.26180647944123e-05	Up	1.82347686029284e-06	NA	NA	NA	K11982//E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27];K11274//chromosome transmission fidelity protein 4	gi|723687199|ref|XP_010318890.1|//PREDICTED: E3 ubiquitin ligase BIG BROTHER-related-like [Solanum lycopersicum]
Solyc02g090150.1.1	1359	41.2103163286695	12.8275074367907	-1.68376467579099	0.0260619419397864	Down	0.00876146765897323	NA	NA	NA	K10260//F-box and WD-40 domain protein 7;K03362//F-box and WD-40 domain protein 1/11;K14963//COMPASS component SWD3;K16794//platelet-activating factor acetylhydrolase IB subunit alpha	gi|460372510|ref|XP_004232072.1|//PREDICTED: F-box/WD repeat-containing protein sel-10 [Solanum lycopersicum]
Solyc06g072370.3.1	1380	179.136549361291	65.7976508798952	-1.44495173885887	0.0252363350569462	Down	0.00844252673088162	NA	NA	NA	NA	gi|525313734|ref|NP_001266122.1|//GAGA-binding transcriptional activator isoform 1 [Solanum lycopersicum]
Solyc10g086780.2.1	2111	1.29896539108653	1262.85542387691	9.92511077551594	2.30890743507128e-36	Up	1.03276014689337e-38	NA	NA	NA	K05278//flavonol synthase [EC:1.14.11.23]	gi|723740026|ref|XP_010312366.1|//PREDICTED: codeine O-demethylase-like [Solanum lycopersicum]
Solyc06g071410.3.1	3484	484.062654639314	229.389388510609	-1.07739514056208	0.000924308482653601	Down	0.000203996963090501	NA	GO:0004713//protein tyrosine kinase activity;GO:0032559//adenyl ribonucleotide binding	GO:0006464//cellular protein modification process	K15382//solute carrier family 50 (sugar transporter)	gi|460391807|ref|XP_004241510.1|//PREDICTED: serine/threonine-protein kinase HT1 [Solanum lycopersicum]
Solyc01g089950.3.1	2001	65.2039719478581	20.352527513522	-1.67975188078724	0.0063135083499596	Down	0.00174146271767188	NA	NA	NA	K10278	gi|698549129|ref|XP_009768554.1|//PREDICTED: FBD-associated F-box protein At2g26860-like [Nicotiana sylvestris]
Solyc11g021270.1.1	156	399.802638001521	66.8570656231367	-2.58013605025498	0.0328154657244063	Down	0.0114379536301224	GO:0031224//intrinsic component of membrane;GO:0009941//chloroplast envelope	NA	NA	NA	gi|813424324|ref|YP_009132102.1|//Ycf1 (chloroplast) [Solanum neorickii]
Solyc03g044620.3.1	4623	1166.52420290467	247.350279875682	-2.23758880348406	6.73730362593375e-10	Down	4.64338541984177e-11	NA	NA	NA	NA	gi|723680830|ref|XP_010317806.1|//PREDICTED: transmembrane protein 131 homolog isoform X3 [Solanum lycopersicum];gi|723680827|ref|XP_010317805.1|//PREDICTED: transmembrane protein 131 homolog isoform X2 [Solanum lycopersicum]
Solyc09g075670.1.1	951	55.7628847244463	936.875076022976	4.07047958840763	7.06620084202695e-14	Up	2.67603252404182e-15	NA	NA	NA	K13258//2-hydroxyisoflavanone dehydratase [EC:4.2.1.105]	gi|460403808|ref|XP_004247378.1|//PREDICTED: 2-hydroxyisoflavanone dehydratase-like [Solanum lycopersicum]
Solyc03g082610.1.1	624	686.899976938446	301.858739735992	-1.18622646384383	0.000398698332482284	Down	8.01765880327241e-05	NA	NA	NA	NA	gi|723682377|ref|XP_010318049.1|//PREDICTED: uncharacterized protein LOC104646389 [Solanum lycopersicum]
Solyc01g107390.3.1	1887	14.7648660548697	1799.26589291491	6.92909632293692	1.14958958351041e-53	Up	1.07125911688386e-56	NA	NA	NA	K14487//auxin responsive GH3 gene family	gi|460369752|ref|XP_004230721.1|//PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.1 [Solanum lycopersicum]
Solyc09g010850.3.1	2295	974.391811200257	3918.47700679864	2.00771911748072	2.68175613108059e-05	Up	4.16937707720931e-06	NA	GO:0004674//protein serine/threonine kinase activity;GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process;GO:0006468//protein phosphorylation	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460401833|ref|XP_004246420.1|//PREDICTED: probable serine/threonine-protein kinase NAK isoform X2 [Solanum lycopersicum]
Solyc05g055550.3.1	926	1126.6791282782	550.929971443975	-1.03213584777775	0.000640409875594981	Down	0.000135706356894195	NA	NA	NA	NA	gi|460388095|ref|XP_004239705.1|//PREDICTED: uncharacterized protein LOC101264329 [Solanum lycopersicum]
Solyc01g007220.3.1	636	1238.68420148565	5536.50111628379	2.16016610524336	0.0010221912923324	Up	0.000227505002479378	NA	NA	NA	NA	gi|460365393|ref|XP_004228587.1|//PREDICTED: protein YLS9-like [Solanum lycopersicum]
Solyc07g062260.3.1	1557	635.473444824254	186.767597296312	-1.76658765856644	0.0051940240496117	Down	0.00139317865890136	NA	NA	NA	K14503//brassinosteroid resistant 1/2	gi|460397464|ref|XP_004244287.1|//PREDICTED: BES1/BZR1 homolog protein 4 [Solanum lycopersicum]
Solyc05g010475.1.1	1258	8.15963900871348	62.4950227793741	2.93716406308892	0.0355596489841241	Up	0.0125309721744412	NA	NA	NA	NA	gi|460386631|ref|XP_004239001.1|//PREDICTED: uncharacterized protein LOC101251473 isoform X1 [Solanum lycopersicum]
Solyc06g068450.2.1	1353	709.511424230456	294.090641774626	-1.27056503697458	0.0159983692947546	Down	0.00497757523868036	NA	NA	NA	K07198//5'-AMP-activated protein kinase, catalytic alpha subunit [EC:2.7.11.11]	gi|460392150|ref|XP_004241680.1|//PREDICTED: CBL-interacting serine/threonine-protein kinase 25-like [Solanum lycopersicum]
Solyc06g009630.1.1	384	6542.34785730611	3159.79080268359	-1.04997942330134	0.000515717309314699	Down	0.00010653441658797	NA	NA	NA	NA	gi|723704492|ref|XP_010321871.1|//PREDICTED: calvin cycle protein CP12-1, chloroplastic [Solanum lycopersicum]
Solyc05g043330.3.1	1326	832.536234376159	26.3347600200289	-4.9824728459352	4.50033166972628e-16	Down	1.2815913954342e-17	NA	NA	NA	K21026;K01188//beta-glucosidase [EC:3.2.1.21];K00679//phospholipid:diacylglycerol acyltransferase [EC:2.3.1.158];K10960//geranylgeranyl reductase [EC:1.3.1.83]	gi|460389012|ref|XP_004240155.1|//PREDICTED: GDSL esterase/lipase At2g04570-like [Solanum lycopersicum]
Solyc02g093160.3.1	4281	386.10379573673	984.068158840358	1.34976950612705	0.00220912802832959	Up	0.000533342859679839	NA	NA	NA	K10352//myosin heavy chain;K20478//golgin subfamily B member 1	gi|460372076|ref|XP_004231859.1|//PREDICTED: filament-like plant protein 7 [Solanum lycopersicum]
Solyc10g078600.2.1	2051	1898.47420213967	5477.65384652581	1.52871770492616	0.00668453463333264	Up	0.00185775645691547	NA	NA	NA	K03695//ATP-dependent Clp protease ATP-binding subunit ClpB	gi|460407428|ref|XP_004249154.1|//PREDICTED: jacalin-related lectin 3 isoform X2 [Solanum lycopersicum]
Solyc06g082940.3.1	877	51593.1987525687	8198.1858011771	-2.65380430338062	7.9501925130522e-09	Down	6.46019818042858e-10	NA	NA	NA	K02699//photosystem I subunit XI	gi|460393734|ref|XP_004242464.1|//PREDICTED: photosystem I reaction center subunit XI, chloroplastic [Solanum lycopersicum]
Solyc03g082920.3.1	2166	1980.28757400336	22387.1687957486	3.49889023223408	1.33071909821795e-17	Up	3.20428111468912e-19	GO:0044432//endoplasmic reticulum part	GO:0032559//adenyl ribonucleotide binding;GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	GO:0008152//metabolic process;GO:0050896//response to stimulus	K09490//heat shock 70kDa protein 5	gi|460378451|ref|XP_004234985.1|//PREDICTED: luminal-binding protein 5 [Solanum lycopersicum]
Solyc09g075960.1.1	912	66.4717340367257	27.6184405942751	-1.26710912597289	0.0387456353425552	Down	0.0138457732976396	NA	NA	NA	K10406//kinesin family member C2/C3	gi|460403772|ref|XP_004247361.1|//PREDICTED: uncharacterized protein LOC101254730 [Solanum lycopersicum]
Solyc02g066800.2.1	561	527.624652557543	1362.61686090953	1.36879608450263	0.00297529336573422	Up	0.000745265074464512	NA	NA	NA	NA	gi|460375186|ref|XP_004233388.1|//PREDICTED: uncharacterized protein LOC101250472 [Solanum lycopersicum]
Solyc01g096420.3.1	808	438.949184082272	9994.08028270465	4.50894796955126	4.84753684924377e-11	Up	2.78261769339325e-12	NA	GO:0016655//oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	GO:0008152//metabolic process	K13436//pto-interacting protein 1 [EC:2.7.11.1]	gi|460368344|ref|XP_004230027.1|//PREDICTED: NAD(P)H:quinone oxidoreductase [Solanum lycopersicum]
Solyc01g106020.3.1	2321	778.301986670765	299.795950182227	-1.37634914505377	0.00259245826946741	Down	0.000638837841786531	NA	NA	NA	K13162//poly(rC)-binding protein 2/3/4	gi|460369396|ref|XP_004230548.1|//PREDICTED: KH domain-containing protein At4g18375 [Solanum lycopersicum]
Solyc08g036640.3.1	589	217.497287528158	2241.96041122564	3.36569148918912	0.000198406375639652	Up	3.72880925143553e-05	NA	NA	NA	K13464//jasmonate ZIM domain-containing protein	gi|460398761|ref|XP_004244920.1|//PREDICTED: protein TIFY 5A-like [Solanum lycopersicum]
Solyc05g054620.3.1	3418	635.379052196642	133.537828326542	-2.25036904309293	7.67177101872096e-11	Down	4.54964503160319e-12	NA	NA	NA	NA	gi|460388243|ref|XP_004239778.1|//PREDICTED: uncharacterized protein LOC101260344 [Solanum lycopersicum]
Solyc02g080130.3.1	1504	833.298187382364	2951.68569698958	1.82463436071844	8.5034590050645e-08	Up	8.19663969997644e-09	NA	NA	NA	K19371//DnaJ homolog subfamily C member 25	gi|460373889|ref|XP_004232745.1|//PREDICTED: chaperone protein dnaJ 50 [Solanum lycopersicum]
Solyc04g080040.3.1	2901	1685.2830001411	21.8278779785216	-6.27067518128824	8.56565905664246e-31	Down	5.90669049306268e-33	NA	NA	NA	NA	gi|460385084|ref|XP_004238235.1|//PREDICTED: J domain-containing protein required for chloroplast accumulation response 1 [Solanum lycopersicum]
Solyc03g112670.3.1	1666	1947.39896745256	713.274040461442	-1.44902010922134	4.33593008513179e-06	Down	5.70355496884974e-07	NA	NA	NA	NA	gi|460380979|ref|XP_004236230.1|//PREDICTED: uncharacterized protein LOC101257648 [Solanum lycopersicum]
Solyc07g042150.3.1	2991	744.282555432431	249.957892787781	-1.57416533936316	2.75298824957831e-05	Down	4.291410787139e-06	NA	NA	NA	K18587//ubiquinone biosynthesis protein COQ9	gi|460396267|ref|XP_004243698.1|//PREDICTED: ubiquinone biosynthesis protein COQ9-B, mitochondrial [Solanum lycopersicum]
Solyc08g083190.3.1	3676	282.004017745733	74.4632537175329	-1.92111515489933	6.7431517799716e-06	Down	9.27472419416102e-07	NA	GO:0003824//catalytic activity	NA	NA	gi|460399859|ref|XP_004245454.1|//PREDICTED: uncharacterized protein LOC101263046 [Solanum lycopersicum]
Solyc10g079790.1.1	3506	25.5988785477046	77.616139509386	1.60027606869908	0.00480666361407207	Up	0.00127848425531376	NA	NA	NA	K12472//epidermal growth factor receptor substrate 15;K20478//golgin subfamily B member 1	gi|460408643|ref|XP_004249752.1|//PREDICTED: uncharacterized protein LOC101258807 [Solanum lycopersicum]
Solyc07g065330.3.1	3267	534.570982381205	1263.61262284656	1.24110082171042	0.0200852688606562	Up	0.00647073873425718	NA	GO:0046872//metal ion binding;GO:0003824//catalytic activity	NA	K11426//SET and MYND domain-containing protein;K00640//serine O-acetyltransferase [EC:2.3.1.30]	gi|565358684|ref|XP_006346156.1|//PREDICTED: germin-like protein 11-1 [Solanum tuberosum];gi|723719082|ref|XP_004244065.2|//PREDICTED: LOW QUALITY PROTEIN: serine acetyltransferase 1, chloroplastic-like [Solanum lycopersicum]
Solyc01g008640.3.1	1993	0.468142353597489	32.0356394608017	6.09658668416986	6.7148049450805e-06	Up	9.22822641736686e-07	NA	GO:0005506//iron ion binding;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30];K15472//premnaspirodiene oxygenase [EC:1.14.13.121]	gi|460365239|ref|XP_004228511.1|//PREDICTED: premnaspirodiene oxygenase-like [Solanum lycopersicum]
Solyc06g072230.1.1	603	123.430868919594	681.392683053676	2.46478321122846	1.20272293190598e-07	Up	1.18891501991004e-08	NA	NA	NA	NA	gi|460391744|ref|XP_004241479.1|//PREDICTED: miraculin-like [Solanum lycopersicum]
Solyc10g006330.3.1	2649	2696.53298125838	130.467225240442	-4.36934634251106	7.98148761914171e-32	Down	5.027849290424e-34	NA	NA	NA	NA	gi|723734743|ref|XP_010327172.1|//PREDICTED: uncharacterized protein LOC101255738 [Solanum lycopersicum]
Solyc01g108070.3.1	2431	1691.70981640988	473.574570258622	-1.83681860114111	4.12760533787025e-08	Down	3.75558544421547e-09	NA	NA	NA	K03152//4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis	gi|460369863|ref|XP_004230776.1|//PREDICTED: protein DJ-1 homolog C isoform X1 [Solanum lycopersicum]
Solyc04g071005.1.1	1989	1121.62857346981	336.546810975189	-1.73671591629204	3.61298791125645e-09	Down	2.78771618320443e-10	NA	NA	NA	K15111//solute carrier family 25 (mitochondrial S-adenosylmethionine transporter), member 26	gi|723693721|ref|XP_010320064.1|//PREDICTED: protein MITOFERRINLIKE 1, chloroplastic [Solanum lycopersicum]
Solyc11g027840.2.1	1598	117.831684127662	57.2184949015396	-1.04217406804758	0.00419424818202222	Down	0.0010982834675798	NA	NA	NA	K01061//carboxymethylenebutenolidase [EC:3.1.1.45]	gi|460410432|ref|XP_004250633.1|//PREDICTED: carboxymethylenebutenolidase homolog [Solanum lycopersicum]
Solyc02g067700.1.1	513	9.93697578578225	35.5264437030541	1.83801452344944	0.0139599947453984	Up	0.00425981192579981	NA	NA	NA	K19038//E3 ubiquitin-protein ligase ATL41 [EC:2.3.2.27];K19041//E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27];K10664//E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:2.3.2.27]	gi|460375074|ref|XP_004233333.1|//PREDICTED: RING-H2 finger protein ATL2-like [Solanum lycopersicum]
Solyc01g098850.3.1	1406	5.77200016444797	31.749629891147	2.4595965282864	0.0309284050017204	Up	0.0106729973723694	NA	NA	NA	K11147//dehydrogenase/reductase SDR family member 4 [EC:1.1.-.-]	gi|460368658|ref|XP_004230182.1|//PREDICTED: glucose and ribitol dehydrogenase homolog 1 [Solanum lycopersicum]
Solyc07g052135.1.1	1228	28.6491210338977	336.060750679418	3.55215927442613	2.40532943210266e-08	Up	2.0917077549931e-09	NA	NA	NA	K15803//(-)-germacrene D synthase [EC:4.2.3.22 4.2.3.75]	gi|723715797|ref|XP_004243482.2|//PREDICTED: (-)-germacrene D synthase [Solanum lycopersicum]
Solyc12g049540.2.1	3679	364.964494543219	881.336222963881	1.27193638248998	0.0101509956517002	Up	0.00297363481536871	NA	NA	NA	K12127//pseudo-response regulator 1;K04482//DNA repair protein RAD51;K02891//large subunit ribosomal protein L22e	gi|460414073|ref|XP_004252399.1|//PREDICTED: phosphoinositide phosphatase SAC2 isoform X1 [Solanum lycopersicum];gi|723751285|ref|XP_010314334.1|//PREDICTED: phosphoinositide phosphatase SAC2 isoform X4 [Solanum lycopersicum];gi|723751280|ref|XP_010314333.1|//PREDICTED: phosphoinositide phosphatase SAC2 isoform X3 [Solanum lycopersicum]
Solyc10g006710.3.1	3862	214.516588340811	671.476032256583	1.64624669072791	0.0135373888735394	Up	0.00411652074065658	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|723735235|ref|XP_010327263.1|//PREDICTED: uncharacterized protein LOC101244232 [Solanum lycopersicum]
Solyc02g087580.3.1	3780	319.718324446969	2147.81535271603	2.74799663170682	5.47799643664113e-11	Up	3.1792308229649e-12	NA	NA	NA	K08867//WNK lysine deficient protein kinase [EC:2.7.11.1]	gi|723671515|ref|XP_004232247.2|//PREDICTED: uncharacterized protein LOC101261868 [Solanum lycopersicum]
Solyc03g078710.2.1	3013	17.0792127430736	84.0844755429396	2.29959798504903	4.89851657143583e-05	Up	7.99377722891981e-06	NA	NA	NA	K13493//cytokinin-N-glucosyltransferase [EC:2.4.1.-];K13030//cyanohydrin beta-glucosyltransferase [EC:2.4.1.85];K00699//glucuronosyltransferase [EC:2.4.1.17]	gi|723682612|ref|XP_010318076.1|//PREDICTED: 7-deoxyloganetic acid glucosyltransferase-like [Solanum lycopersicum]
Solyc10g083910.2.1	923	1452.06454236967	163.460155951555	-3.15109465950238	6.34389762444769e-12	Down	3.17573226093382e-13	NA	NA	NA	NA	gi|460408078|ref|XP_004249475.1|//PREDICTED: uncharacterized protein LOC101268528 [Solanum lycopersicum]
Solyc06g071960.3.1	3860	3828.49191592912	1148.51990270398	-1.73700035358482	0.00513853512124873	Down	0.00137599658234124	GO:0031224//intrinsic component of membrane	NA	NA	K00940//nucleoside-diphosphate kinase [EC:2.7.4.6]	gi|460391831|ref|XP_004241522.1|//PREDICTED: GDP-mannose transporter GONST3-like [Solanum lycopersicum]
Solyc08g065320.3.1	1466	403.142179356835	1010.33866750936	1.3254783279255	0.0035051417670473	Up	0.000897320473239931	GO:0016021//integral component of membrane	NA	NA	K20726	gi|350534758|ref|NP_001233902.1|//green ripe-like 1 [Solanum lycopersicum]
Solyc01g112090.3.1	4727	233.295494889265	551.180848941059	1.2403673136707	0.0186063496419866	Up	0.0059200760602355	GO:0016021//integral component of membrane	GO:0015238//drug transmembrane transporter activity;GO:0015297//antiporter activity	GO:0006855//drug transmembrane transport	K00485//dimethylaniline monooxygenase (N-oxide forming) [EC:1.14.13.8]	gi|697134531|ref|XP_009621311.1|//PREDICTED: MATE efflux family protein 3, chloroplastic-like [Nicotiana tomentosiformis];gi|460370487|ref|XP_004231084.1|//PREDICTED: MATE efflux family protein 3, chloroplastic [Solanum lycopersicum]
Solyc04g009030.3.1	1487	129450.913573198	14574.8210334769	-3.15085507322995	3.65167727597258e-37	Down	1.44281270036191e-39	GO:0009536//plastid	GO:0000166//nucleotide binding	GO:0015977//carbon fixation;GO:0019318//hexose metabolic process	K05298//glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) [EC:1.2.1.13]	gi|460382243|ref|XP_004236849.1|//PREDICTED: glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic [Solanum lycopersicum]
Solyc08g066120.3.1	6122	2417.28404207525	410.882731854133	-2.55658840158859	1.18661710745769e-08	Down	9.91206552039918e-10	NA	NA	NA	K00962//polyribonucleotide nucleotidyltransferase [EC:2.7.7.8]	gi|971585365|ref|XP_015160496.1|//PREDICTED: probable polyribonucleotide nucleotidyltransferase 1, chloroplastic [Solanum tuberosum];gi|723722541|ref|XP_010325062.1|//PREDICTED: probable polyribonucleotide nucleotidyltransferase 1, chloroplastic [Solanum lycopersicum]
Solyc02g091560.3.1	2645	66611.2753454409	12266.4939032525	-2.44104345760655	2.75115895440417e-16	Down	7.67059377476636e-18	GO:0043231//intracellular membrane-bounded organelle;GO:0048046//apoplast;GO:0005634//nucleus;GO:0009534//chloroplast thylakoid;GO:0005739//mitochondrion;GO:0005886//plasma membrane;GO:0010319//stromule;GO:0009570//chloroplast stroma;GO:0022626//cytosolic ribosome	GO:0004372//glycine hydroxymethyltransferase activity;GO:0008266//poly(U) RNA binding;GO:0016742//hydroxymethyl-, formyl- and related transferase activity;GO:0048037//cofactor binding;GO:0030170//pyridoxal phosphate binding	GO:0006730//one-carbon metabolic process;GO:0009069//serine family amino acid metabolic process;GO:0006544//glycine metabolic process;GO:0009853//photorespiration;GO:0035999//tetrahydrofolate interconversion;GO:0006563//L-serine metabolic process	K00600//glycine hydroxymethyltransferase [EC:2.1.2.1]	gi|460372325|ref|XP_004231981.1|//PREDICTED: serine hydroxymethyltransferase, mitochondrial [Solanum lycopersicum]
Solyc07g045030.3.1	2024	106.42178491325	409.824877141618	1.94521405549883	0.0135970128155148	Up	0.00413718561253346	NA	NA	NA	K12581//CCR4-NOT transcription complex subunit 7/8;K02437//glycine cleavage system H protein;K03094//S-phase kinase-associated protein 1;K13126//polyadenylate-binding protein;K01054//acylglycerol lipase [EC:3.1.1.23]	gi|723716331|ref|XP_010323924.1|//PREDICTED: transcription factor JUNGBRUNNEN 1-like isoform X1 [Solanum lycopersicum];gi|723716333|ref|XP_004243883.2|//PREDICTED: transcription factor JUNGBRUNNEN 1-like isoform X2 [Solanum lycopersicum]
Solyc03g116510.1.1	282	21.8051764909039	736.448056581348	5.07784119942489	2.48643484147321e-18	Up	5.45888669161966e-20	NA	NA	NA	NA	gi|723686607|ref|XP_010318785.1|//PREDICTED: uncharacterized protein LOC104646577 [Solanum lycopersicum]
Solyc12g038350.2.1	1555	25.9466543970353	4.67698474192508	-2.47189789991174	0.00161065341064457	Down	0.000375887170271569	NA	NA	NA	K17604//zinc finger SWIM domain-containing protein 3;K17086//transmembrane 9 superfamily member 2/4;K14808//ATP-dependent RNA helicase DDX54/DBP10 [EC:3.6.4.13]	gi|698483337|ref|XP_009788539.1|//PREDICTED: uncharacterized protein LOC104236329, partial [Nicotiana sylvestris];gi|971570443|ref|XP_015169424.1|//PREDICTED: alpha carbonic anhydrase 8-like [Solanum tuberosum]
Solyc08g080780.3.1	4120	911.059963091032	181.149458280051	-2.33036551930809	0.00151651137040397	Down	0.00035159910257614	NA	NA	NA	K20283//golgin subfamily A member 4;K20478//golgin subfamily B member 1	gi|460400191|ref|XP_004245619.1|//PREDICTED: cingulin isoform X1 [Solanum lycopersicum];gi|723724416|ref|XP_010325416.1|//PREDICTED: cingulin isoform X2 [Solanum lycopersicum]
Solyc01g005560.3.1	1717	3288.82966182968	8722.69741172698	1.40720005511873	0.00147372405831485	Up	0.000340470467922895	GO:0044424//intracellular part	GO:0004448//isocitrate dehydrogenase activity;GO:0046872//metal ion binding;GO:0000166//nucleotide binding	GO:0019752//carboxylic acid metabolic process;GO:0044262//cellular carbohydrate metabolic process;GO:0009060//aerobic respiration	K00031//isocitrate dehydrogenase [EC:1.1.1.42]	gi|460365435|ref|XP_004228607.1|//PREDICTED: isocitrate dehydrogenase [NADP] [Solanum lycopersicum]
Solyc09g008040.3.1	2033	1593.73039230059	134.642888237406	-3.5651976579588	1.2418361591209e-08	Down	1.0401095309172e-09	NA	NA	NA	K03086//RNA polymerase primary sigma factor	gi|460402283|ref|XP_004246643.1|//PREDICTED: RNA polymerase sigma factor sigF, chloroplastic isoform X1 [Solanum lycopersicum]
Solyc10g011910.3.1	976	153.530057950216	3902.30019656762	4.66773172836516	1.029198081977e-11	Up	5.31325236148109e-13	NA	NA	NA	K13425//WRKY transcription factor 22	gi|460405198|ref|XP_004248063.1|//PREDICTED: WRKY transcription factor 22-like [Solanum lycopersicum]
Solyc07g064420.3.1	2250	525.345363134936	193.628754120338	-1.43997295478707	0.00735620565041416	Down	0.00207102360509834	NA	NA	NA	K08472//mlo protein	gi|460397152|ref|XP_004244132.1|//PREDICTED: uncharacterized protein LOC101251905 [Solanum lycopersicum]
Solyc10g076240.2.1	2412	0.786261323807574	1245.71388853561	10.6296762425431	3.64633181851215e-23	Up	4.87935411825653e-25	NA	NA	NA	K00430//peroxidase [EC:1.11.1.7]	gi|460407226|ref|XP_004249055.1|//PREDICTED: cationic peroxidase 1 [Solanum lycopersicum]
Solyc03g065205.1.1	1598	414.618030409874	3.97888684847246	-6.70327417349777	1.21050223969407e-26	Down	1.15960591770306e-28	NA	NA	NA	NA	gi|460378165|ref|XP_004234846.1|//PREDICTED: uncharacterized protein LOC101251556 [Solanum lycopersicum]
Solyc09g074930.3.1	1329	520.4909822868	1455.95507289077	1.48402076469674	0.00459696913057786	Up	0.00121675405532404	NA	NA	GO:0050896//response to stimulus	K17616//CTD small phosphatase-like protein 2 [EC:3.1.3.-];K01228//mannosyl-oligosaccharide glucosidase [EC:3.2.1.106]	gi|460403916|ref|XP_004247432.1|//PREDICTED: stress-related protein [Solanum lycopersicum]
Solyc09g090570.2.1	752	9166.20769901748	252.625152028299	-5.18125478648817	1.2181960048129e-38	Down	4.17750232752298e-41	NA	NA	NA	NA	gi|460404590|ref|XP_004247764.1|//PREDICTED: protein PROTON GRADIENT REGULATION 5, chloroplastic [Solanum lycopersicum]
Solyc12g005440.1.1	1320	0.392619676404477	10.7637459551441	4.77690395965566	0.00151408024942963	Up	0.000350979017116553	NA	NA	NA	K13065//shikimate O-hydroxycinnamoyltransferase [EC:2.3.1.133]	gi|970067437|ref|XP_015060809.1|//PREDICTED: pelargonidin 3-O-(6-caffeoylglucoside) 5-O-(6-O-malonylglucoside) 4'''-malonyltransferase-like [Solanum pennellii]
Solyc11g069550.1.1	1726	273.670265322015	550.329941401363	1.00785813018996	0.00234393550679604	Up	0.000569741527390303	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K03252//translation initiation factor 3 subunit C;K19995//secretory carrier-associated membrane protein	gi|970060236|ref|XP_015056877.1|//PREDICTED: uncharacterized protein LOC107003126 [Solanum pennellii];gi|460411493|ref|XP_004251145.1|//PREDICTED: uncharacterized protein LOC101261883 [Solanum lycopersicum]
Solyc07g041720.1.1	636	9111.1554614273	2736.67045890804	-1.73521230534537	0.00204429137424934	Down	0.000489279667289958	GO:0030312//external encapsulating structure;GO:0005576//extracellular region	GO:0016209//antioxidant activity;GO:0046914//transition metal ion binding;GO:0003824//catalytic activity;GO:0004871//signal transducer activity	GO:0008152//metabolic process;GO:0009755//hormone-mediated signaling pathway	K11426//SET and MYND domain-containing protein	gi|460396303|ref|XP_004243715.1|//PREDICTED: auxin-binding protein ABP19a-like [Solanum lycopersicum]
Solyc07g025370.3.1	2173	292.490048752652	699.842985273768	1.25864373810427	0.00673852369406563	Up	0.00187502159595199	NA	NA	NA	K07428//cytochrome P450, family 4, subfamily X [EC:1.14.14.1];K15639//PHYB activation tagged suppressor 1 [EC:1.14.-.-]	gi|460394762|ref|XP_004242962.1|//PREDICTED: cytochrome P450 734A1-like [Solanum lycopersicum]
Solyc02g080290.3.1	1747	150.400447273987	961.978048372917	2.67719511570341	5.54831755294509e-07	Up	6.16502707072063e-08	NA	NA	NA	K05350//beta-glucosidase [EC:3.2.1.21]	gi|723673936|ref|XP_010316602.1|//PREDICTED: beta-glucosidase 18-like isoform X1 [Solanum lycopersicum]
Solyc05g007350.2.1	3729	6.30649700262321	33.365325777858	2.4034388147705	0.000549404359733776	Up	0.000114394392182528	NA	NA	NA	K13453;K13457//disease resistance protein RPM1	gi|970027790|ref|XP_015075185.1|//PREDICTED: putative late blight resistance protein homolog R1B-23 [Solanum pennellii]
Solyc02g070550.3.1	1742	1623.959764908	3858.799359851	1.24863614332555	1.71131230668496e-06	Up	2.10437576403522e-07	NA	GO:0005488//binding	NA	K15191//La-related protein 7	gi|460374638|ref|XP_004233117.1|//PREDICTED: uncharacterized protein LOC101246207 [Solanum lycopersicum];gi|460374636|ref|XP_004233116.1|//PREDICTED: la-related protein 6A [Solanum lycopersicum]
Solyc02g091770.2.1	4628	73.6919484888365	235.490655110064	1.67609090545604	0.000329203240855869	Up	6.49497820877484e-05	NA	NA	NA	K00703//starch synthase [EC:2.4.1.21];K15193//protein SPT2	gi|723678008|ref|XP_010317273.1|//PREDICTED: LOW QUALITY PROTEIN: probable starch synthase 4, chloroplastic/amyloplastic [Solanum lycopersicum];gi|723669770|ref|XP_010316049.1|//PREDICTED: uncharacterized protein LOC101249596 isoform X1 [Solanum lycopersicum]
Solyc02g078650.3.1	2187	25.0811924853463	112.932905099272	2.17078805553389	0.00205603060941395	Up	0.000492395879882385	NA	NA	NA	K00422//polyphenol oxidase [EC:1.10.3.1]	gi|723674527|ref|XP_004232833.2|//PREDICTED: polyphenol oxidase, chloroplastic-like [Solanum lycopersicum]
Solyc07g066150.1.1	441	19261.6907068947	1874.86795603246	-3.3608734446125	5.1223135754006e-13	Down	2.17471118323441e-14	NA	NA	NA	K08905//photosystem I subunit V	gi|460396886|ref|XP_004244001.1|//PREDICTED: photosystem I reaction center subunit V, chloroplastic [Solanum lycopersicum]
Solyc06g063180.2.1	3273	382.048502676569	2530.53251514371	2.72761330059268	2.37223891485954e-07	Up	2.46702943658048e-08	NA	NA	NA	K05387//glutamate receptor, ionotropic, plant	gi|723710022|ref|XP_004241863.2|//PREDICTED: glutamate receptor 2.8-like [Solanum lycopersicum]
Solyc10g009060.1.1	969	249.973970055753	589.511403324959	1.23774184653762	0.000160451866406856	Up	2.95569227591577e-05	NA	GO:0004672//protein kinase activity	NA	K08867//WNK lysine deficient protein kinase [EC:2.7.11.1]	gi|460405292|ref|XP_004248110.1|//PREDICTED: serine/threonine-protein kinase WNK8-like [Solanum lycopersicum]
Solyc11g012900.2.1	1857	1185.24765186125	2583.76753946853	1.12428774228533	0.000642722542428681	Up	0.000136220380805482	NA	NA	NA	K16365//small glutamine-rich tetratricopeptide repeat-containing protein alpha	gi|460409782|ref|XP_004250317.1|//PREDICTED: small glutamine-rich tetratricopeptide repeat-containing protein 2 isoform X2 [Solanum lycopersicum];gi|460409780|ref|XP_004250316.1|//PREDICTED: small glutamine-rich tetratricopeptide repeat-containing protein isoform X1 [Solanum lycopersicum]
Solyc05g013180.3.1	3113	372.997817379981	142.337789002225	-1.38984845727055	0.0192824278418307	Down	0.00616188494414108	GO:0016021//integral component of membrane;GO:0005886//plasma membrane;GO:0005802//trans-Golgi network	NA	NA	K14514//ethylene-insensitive protein 3	gi|723698805|ref|XP_010320921.1|//PREDICTED: phosphate transporter PHO1 homolog 10 isoform X2 [Solanum lycopersicum];gi|460386856|ref|XP_004239111.1|//PREDICTED: phosphate transporter PHO1 homolog 10 isoform X1 [Solanum lycopersicum]
Solyc08g008490.3.1	2841	448.565216946922	1735.85066015216	1.95225317513119	8.8691873217118e-08	Up	8.57561946940526e-09	NA	NA	NA	K20241//WD repeat-containing protein 44	gi|460398189|ref|XP_004244645.1|//PREDICTED: uncharacterized WD repeat-containing protein C3H5.08c isoform X2 [Solanum lycopersicum];gi|460398187|ref|XP_004244644.1|//PREDICTED: uncharacterized WD repeat-containing protein C3H5.08c isoform X1 [Solanum lycopersicum]
Solyc11g011310.2.1	1781	53.1025267222565	1.38533042647732	-5.26047847750724	9.72660582001909e-06	Down	1.38024408665621e-06	NA	GO:0003824//catalytic activity	NA	K18195//rhamnogalacturonan endolyase [EC:4.2.2.23]	gi|971581567|ref|XP_015159509.1|//PREDICTED: probable rhamnogalacturonate lyase B isoform X2 [Solanum tuberosum];gi|723741819|ref|XP_010312681.1|//PREDICTED: probable rhamnogalacturonate lyase B [Solanum lycopersicum]
Solyc11g017000.2.1	2778	442.578071527482	1821.23840630928	2.04091591174433	9.20051094659404e-05	Up	1.59331943707604e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K12812//ATP-dependent RNA helicase UAP56/SUB2 [EC:3.6.4.13];K18081//myotubularin-related protein 1/2 [EC:3.1.3.64 3.1.3.95];K19307//25S rRNA (uracil2634-N3)-methyltransferase [EC:2.1.1.313]	gi|460409885|ref|XP_004250367.1|//PREDICTED: uncharacterized protein LOC101261772 [Solanum lycopersicum]
Solyc12g095770.2.1	3274	4228.11898386769	2033.98457525073	-1.05570723775999	0.00041311161974865	Down	8.33984095929137e-05	NA	NA	NA	NA	gi|460415530|ref|XP_004253111.1|//PREDICTED: uncharacterized protein At1g76660 isoform X1 [Solanum lycopersicum]
Solyc07g007590.1.1	1134	828.805179206117	1928.53266688776	1.21839866001962	0.00018675224220439	Up	3.48412283770417e-05	NA	NA	NA	K15227//arogenate dehydrogenase (NADP+), plant [EC:1.3.1.78]	gi|460394284|ref|XP_004242734.1|//PREDICTED: arogenate dehydrogenase 2, chloroplastic-like [Solanum lycopersicum]
Solyc06g076130.3.1	5236	217.397855567341	1608.83125922792	2.88760340359692	0.000245078638925445	Up	4.69731012880064e-05	NA	NA	NA	K03979//GTPase [EC:3.6.5.-]	gi|460391234|ref|XP_004241228.1|//PREDICTED: protein TRM32 [Solanum lycopersicum]
Solyc03g034375.1.1	279	1043.04849877052	4655.10633557052	2.15800788271768	0.000351478446411698	Up	6.97375790312161e-05	NA	NA	GO:0010876//lipid localization	NA	gi|460377596|ref|XP_004234577.1|//PREDICTED: non-specific lipid-transfer protein 2-like [Solanum lycopersicum]
Solyc03g031600.3.1	1283	899.184278951978	2241.9193936149	1.31804569087408	8.34332621532278e-06	Up	1.17306644118822e-06	NA	NA	NA	K13347//peroxisomal membrane protein 2	gi|970016667|ref|XP_015069442.1|//PREDICTED: peroxisomal membrane protein PMP22-like [Solanum pennellii];gi|723679920|ref|XP_010317660.1|//PREDICTED: peroxisomal membrane protein PMP22-like isoform X2 [Solanum lycopersicum]
Solyc03g114880.2.1	1119	2.56984731008437	25.9296341737952	3.33484730420138	0.00122213941291824	Up	0.000276562113307985	NA	NA	NA	NA	gi|971546508|ref|XP_015163180.1|//PREDICTED: COBRA-like protein 4 [Solanum tuberosum]
Solyc08g076310.3.1	2879	1014.7312672171	203.724242002429	-2.3164081389634	4.63976192778213e-10	Down	3.11992340752906e-11	NA	NA	NA	K03021//DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6];K15601//lysine-specific demethylase 3 [EC:1.14.11.-]	gi|460400790|ref|XP_004245915.1|//PREDICTED: CSC1-like protein At1g32090 [Solanum lycopersicum]
Solyc08g083010.3.1	1775	1211.89152502785	269.748222106576	-2.16757521452314	2.26739455641408e-09	Down	1.69792592210969e-10	NA	NA	NA	NA	gi|460399886|ref|XP_004245467.1|//PREDICTED: uncharacterized protein LOC101267149 [Solanum lycopersicum]
Solyc01g091370.3.1	1313	126.818270640376	283.18585883226	1.15898661605325	0.0133239403996911	Up	0.00403969476707497	NA	NA	NA	NA	gi|460367918|ref|XP_004229817.1|//PREDICTED: uncharacterized protein LOC101253722 [Solanum lycopersicum]
Solyc01g007810.1.1	897	109.794495032352	1.96373303676458	-5.80506309768886	2.89384046304571e-10	Down	1.88011179629069e-11	NA	NA	NA	NA	gi|723655482|ref|XP_010315430.1|//PREDICTED: transcription repressor OFP15 [Solanum lycopersicum]
Solyc12g056950.2.1	748	215.504536691704	44.707240981536	-2.26913781982989	0.000256136949090428	Down	4.93026392240558e-05	NA	NA	NA	NA	gi|460414361|ref|XP_004252540.1|//PREDICTED: uncharacterized protein LOC101250672 [Solanum lycopersicum]
Solyc05g032710.3.1	1331	184.868268744548	53.4750428959083	-1.78955997839389	0.000810673161383671	Down	0.000176137388463747	NA	NA	NA	K05605//3-hydroxyisobutyryl-CoA hydrolase [EC:3.1.2.4]	gi|723700785|ref|XP_010321273.1|//PREDICTED: probable 3-hydroxyisobutyryl-CoA hydrolase 3 [Solanum lycopersicum]
Solyc06g083640.3.1	2907	630.867647376768	1285.3575891075	1.0267605035253	5.80440601477462e-05	Up	9.64732608464293e-06	NA	NA	NA	K14319//Ran GTPase-activating protein 1	gi|460393570|ref|XP_004242382.1|//PREDICTED: ribonuclease inhibitor [Solanum lycopersicum]
Solyc05g012220.3.1	1988	327.574058269414	134.619204349812	-1.28293687451744	4.02729372482965e-06	Down	5.28255800569388e-07	NA	NA	GO:0006810//transport	K16075//magnesium transporter	gi|723698501|ref|XP_010320857.1|//PREDICTED: magnesium transporter MRS2-5 isoform X2 [Solanum lycopersicum];gi|460386724|ref|XP_004239046.1|//PREDICTED: magnesium transporter MRS2-5 isoform X1 [Solanum lycopersicum]
Solyc06g069545.1.1	3151	12.2011561125364	193.766426278286	3.98922885703014	1.28431457344984e-13	Up	5.02179062005695e-15	NA	GO:0003979//UDP-glucose 6-dehydrogenase activity;GO:0051287//NAD binding	GO:0055114//oxidation-reduction process	K00012//UDPglucose 6-dehydrogenase [EC:1.1.1.22]	gi|697152079|ref|XP_009630273.1|//PREDICTED: UDP-glucose 6-dehydrogenase 5-like [Nicotiana tomentosiformis]
Solyc03g093830.3.1	3142	2837.80639765205	1214.57967627461	-1.22431903474985	0.00145731914798868	Down	0.000336240403565353	NA	NA	NA	NA	gi|460378878|ref|XP_004235195.1|//PREDICTED: uncharacterized protein LOC101244466 [Solanum lycopersicum]
Solyc01g067720.3.1	1615	392.463632143882	1119.02961971525	1.51161734648043	3.28556148869754e-05	Up	5.21344686796832e-06	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K17302//coatomer subunit beta'	gi|460366654|ref|XP_004229195.1|//PREDICTED: vesicle-associated protein 2-2 [Solanum lycopersicum]
Solyc07g055420.1.1	657	2.63640398953895	25.6088772809781	3.2800006412475	0.0031131793218349	Up	0.000785605487133678	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|970039470|ref|XP_015081072.1|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Solanum pennellii]
Solyc08g005490.3.1	2866	3068.7192690989	1342.57456968958	-1.19263445095299	0.000158052255460332	Down	2.90618673097442e-05	GO:0016021//integral component of membrane	GO:0008168//methyltransferase activity	GO:0032259//methylation	K16302//metal transporter CNNM;K15449//tRNA wybutosine-synthesizing protein 1 [EC:4.1.3.44]	gi|697131824|ref|XP_009619970.1|//PREDICTED: probable methyltransferase PMT20 [Nicotiana tomentosiformis];gi|460397739|ref|XP_004244424.1|//PREDICTED: probable methyltransferase PMT20 [Solanum lycopersicum]
BGI_novel_G000443	382	2930.52581879386	14076.354136497	2.26404226227289	0.0146590252141489	Up	0.0045062241293084	NA	NA	NA	NA	gi|947068875|gb|KRH17766.1|//hypothetical protein GLYMA_13G013900 [Glycine max]
BGI_novel_G000193	1539	128.569218542823	13.1651078994692	-3.28775402984455	0.00273891167512293	Down	0.000680031708215069	NA	NA	NA	K05747//Wiskott-Aldrich syndrome protein	gi|723696499|ref|XP_010320498.1|//PREDICTED: LOW QUALITY PROTEIN: extensin-3-like [Solanum lycopersicum]
Solyc03g033490.2.1	1121	43.2995465585524	6.06072490136561	-2.83678965217989	0.00200645319199756	Down	0.000479625179673488	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K12173//BRCA1-A complex subunit BRE	gi|723680468|ref|XP_010317741.1|//PREDICTED: thaumatin-like protein 1b, partial [Solanum lycopersicum]
Solyc01g005330.3.1	3217	1838.15569683277	641.689128187395	-1.51831252633703	0.00145962119022392	Down	0.00033684673867112	NA	NA	NA	K09291//nucleoprotein TPR;K20478//golgin subfamily B member 1	gi|460365699|ref|XP_004228735.1|//PREDICTED: microtubule-associated protein 70-2-like [Solanum lycopersicum]
Solyc10g076710.2.1	2760	965.045069203702	113.152067030316	-3.09233338060778	1.64890485364802e-07	Down	1.66943322095365e-08	GO:0005622//intracellular	GO:0046872//metal ion binding;GO:0060089//molecular transducer activity;GO:0004435//phosphatidylinositol phospholipase C activity;GO:0004871//signal transducer activity;GO:0004629//phospholipase C activity	GO:0016042//lipid catabolic process;GO:0007165//signal transduction;GO:0044238//primary metabolic process;GO:0035556//intracellular signal transduction	K05857//phosphatidylinositol phospholipase C, delta [EC:3.1.4.11]	gi|568215248|ref|NP_001275298.1|//phosphoinositide phospholipase C 2-like [Solanum tuberosum];gi|350535605|ref|NP_001234203.1|//PI-phospholipase C PLC1 [Solanum lycopersicum]
Solyc12g099730.2.1	1542	1.13272990324609	49.6258310701685	5.45321546280174	6.46885510970178e-08	Up	6.1100636827137e-09	NA	NA	NA	K08176//MFS transporter, PHS family, inorganic phosphate transporter;K03509//DNA polymerase eta [EC:2.7.7.7];K13675	gi|723752826|ref|XP_004252891.2|//PREDICTED: uncharacterized protein LOC101256858 [Solanum lycopersicum]
BGI_novel_G000440	9240	470.509533282874	122.487711605924	-1.94158693428745	0.00412769997969947	Down	0.00107808236759185	NA	NA	NA	K01303//acylaminoacyl-peptidase [EC:3.4.19.1];K12819//pre-mRNA-processing factor SLU7	gi|723744347|ref|XP_010313151.1|//PREDICTED: uncharacterized protein K02A2.6-like [Solanum lycopersicum]
Solyc09g014510.3.1	709	614.432920706156	280.56182539035	-1.13093679410731	0.0390629156188627	Down	0.0139795382755591	GO:0016020//membrane	GO:0008233//peptidase activity;GO:0008236//serine-type peptidase activity	GO:0006508//proteolysis	K09648//mitochondrial inner membrane protease subunit 2 [EC:3.4.21.-]	gi|460401642|ref|XP_004246326.1|//PREDICTED: mitochondrial inner membrane protease subunit 2 [Solanum lycopersicum]
Solyc08g078207.1.1	1328	55.7941459640195	342.483826820229	2.61785019642438	2.92962874823848e-05	Up	4.58641745288565e-06	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1];K19041//E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27]	gi|460400550|ref|XP_004245797.1|//PREDICTED: putative RING-H2 finger protein ATL21A [Solanum lycopersicum]
Solyc01g099370.3.1	837	2818.48081777635	17851.3999194004	2.66304756203031	0.000309560109791513	Up	6.06935357649978e-05	NA	NA	NA	NA	gi|460368736|ref|XP_004230221.1|//PREDICTED: uncharacterized protein LOC101248717 [Solanum lycopersicum]
Solyc08g016270.2.1	3924	3.46466516710698	284.420718361761	6.35916681646911	1.99704436661006e-18	Up	4.33978256200115e-20	NA	NA	NA	K13466//EIX receptor 1/2;K10406//kinesin family member C2/C3;K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|971587062|ref|XP_015160976.1|//PREDICTED: receptor-like protein 12 [Solanum tuberosum]
Solyc09g089630.3.1	2409	198.035727669847	648.890470302029	1.71221424783107	6.01270031957057e-06	Up	8.17590978298547e-07	NA	NA	NA	K08504//blocked early in transport 1	gi|460404463|ref|XP_004247702.1|//PREDICTED: bet1-like SNARE 1-2 [Solanum lycopersicum];gi|460404465|ref|XP_004247703.1|//PREDICTED: uncharacterized protein LOC101243639 [Solanum lycopersicum]
Solyc08g061260.3.1	591	31.3618716129796	0.949928131102575	-5.04504948160211	0.00122528825016183	Down	0.000277411690453367	GO:0044464//cell part	GO:0004872//receptor activity	GO:0007165//signal transduction	K08467//G protein-coupled receptor 157	gi|723722033|ref|XP_010324991.1|//PREDICTED: G-protein coupled receptor 1 isoform X2 [Solanum lycopersicum]
Solyc12g094430.1.1	666	850.525794328389	196.777584312339	-2.11178910277461	1.97564049477413e-07	Down	2.02807288005366e-08	NA	GO:0016765//transferase activity, transferring alkyl or aryl (other than methyl) groups	NA	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|460415578|ref|XP_004253135.1|//PREDICTED: glutathione S-transferase [Solanum lycopersicum]
Solyc09g059460.3.1	2168	24.3606688685903	73.1262030241763	1.58583470831828	0.00222452490028197	Up	0.000537391750362586	NA	NA	NA	K00033//6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]	gi|460403165|ref|XP_004247067.1|//PREDICTED: membrane protein of ER body 2 [Solanum lycopersicum]
Solyc02g067250.2.1	691	55.8925765006526	165.551208138833	1.56654895300211	0.00462305695734619	Up	0.00122417610798372	GO:0005622//intracellular	NA	NA	NA	gi|460375138|ref|XP_004233364.1|//PREDICTED: uncharacterized protein At5g19025 [Solanum lycopersicum]
Solyc02g024065.1.1	1140	58.6169294607566	243.445301355483	2.05420835375862	2.56111014779074e-09	Up	1.93219283551829e-10	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460369081|ref|XP_004230392.1|//PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770 [Solanum lycopersicum]
Solyc06g009040.3.1	1547	12.015801854914	108.660559022786	3.17682354164129	0.000105012428158381	Up	1.84362806256886e-05	NA	GO:0016765//transferase activity, transferring alkyl or aryl (other than methyl) groups	GO:0009755//hormone-mediated signaling pathway	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|976918831|gb|KVI03991.1|//Glutathione S-transferase/chloride channel, C-terminal [Cynara cardunculus var. scolymus];gi|460389800|ref|XP_004240536.1|//PREDICTED: glutathione S-transferase [Solanum lycopersicum]
Solyc06g074200.3.1	2332	14534.9924658903	2519.19838156786	-2.52849368280881	3.42843379925739e-05	Down	5.45421032325576e-06	NA	NA	NA	K00517;K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30];K14332//photosystem I subunit PsaO	gi|460391443|ref|XP_004241330.1|//PREDICTED: photosystem I subunit O [Solanum lycopersicum];gi|460391445|ref|XP_004241331.1|//PREDICTED: uncharacterized protein At5g41620-like [Solanum lycopersicum]
Solyc12g014390.2.1	5948	45.7464937809062	10.712885193258	-2.09431409401699	0.0285952731468656	Down	0.00973889260261334	GO:0044424//intracellular part	GO:0016861//intramolecular oxidoreductase activity, interconverting aldoses and ketoses	GO:0006007//glucose catabolic process	K01810//glucose-6-phosphate isomerase [EC:5.3.1.9]	gi|172041789|gb|ACB69785.1|//phosphoglucose isomerase, partial [Poa pratensis]
Solyc06g008300.3.1	3514	4.71644143905431	933.960957069166	7.62951967630614	6.825508984148e-34	Up	3.58728480231426e-36	NA	NA	NA	K10406//kinesin family member C2/C3;K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|3894387|gb|AAC78593.1|//Hcr2-0B [Solanum lycopersicum];gi|723704218|ref|XP_010321824.1|//PREDICTED: LOW QUALITY PROTEIN: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Solanum lycopersicum]
Solyc10g051070.1.1	480	1.10636142251033	19.5090864322075	4.14025155872641	0.000316480402872073	Up	6.22037112100955e-05	NA	GO:0003676//nucleic acid binding	NA	NA	gi|970056721|ref|XP_015054988.1|//PREDICTED: NAC domain-containing protein 100-like [Solanum pennellii]
Solyc03g097150.3.1	1769	124.090378632055	299.349541866907	1.27043980209372	0.00790953660059632	Up	0.00224567393345543	NA	NA	NA	K00913//inositol-1,3,4-trisphosphate 5/6-kinase / inositol-tetrakisphosphate 1-kinase [EC:2.7.1.159 2.7.1.134]	gi|460379178|ref|XP_004235341.1|//PREDICTED: inositol-tetrakisphosphate 1-kinase 1 [Solanum lycopersicum]
Solyc08g082080.3.1	1635	249.160609425764	81.6509213717076	-1.60953493548768	0.0134374483569691	Down	0.00408062068600818	GO:0031224//intrinsic component of membrane	NA	NA	K14209//solute carrier family 36 (proton-coupled amino acid transporter);K15015//solute carrier family 32 (vesicular inhibitory amino acid transporter)	gi|460400019|ref|XP_004245533.1|//PREDICTED: probable GABA transporter 2 [Solanum lycopersicum]
Solyc03g111930.3.1	2702	269.041441890285	23.7177960834907	-3.50378655350285	0.000282620325116142	Down	5.49059614770141e-05	NA	NA	NA	K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30];K07408//cytochrome P450, family 1, subfamily A, polypeptide 1 [EC:1.14.14.1]	gi|460381087|ref|XP_004236284.1|//PREDICTED: cytochrome P450 71A4-like [Solanum lycopersicum];gi|723688041|ref|XP_010319030.1|//PREDICTED: cytochrome P450 71A4-like [Solanum lycopersicum]
Solyc09g018690.3.1	2749	181.548966623397	69.0455294655408	-1.39473880680838	0.00904077315655097	Down	0.00260763018806439	NA	NA	NA	K03654//ATP-dependent DNA helicase RecQ [EC:3.6.4.12]	gi|460402586|ref|XP_004246792.1|//PREDICTED: mediator of RNA polymerase II transcription subunit 34-like isoform X1 [Solanum lycopersicum];gi|723726606|ref|XP_010325732.1|//PREDICTED: Werner syndrome ATP-dependent helicase homolog isoform X4 [Solanum lycopersicum];gi|723726600|ref|XP_010325730.1|//PREDICTED: mediator of RNA polymerase II transcription subunit 34-like isoform X2 [Solanum lycopersicum]
Solyc12g087870.2.1	1137	106.971466650603	35.9330029494929	-1.57384461377004	0.0473267506807863	Down	0.0175526006140534	GO:0031224//intrinsic component of membrane	NA	NA	NA	gi|460414725|ref|XP_004252714.1|//PREDICTED: purine permease 3-like [Solanum lycopersicum]
Solyc03g007270.3.1	1783	643.94145944031	1379.99362284691	1.09966015575081	0.000903559085509424	Up	0.000198878649170015	GO:0043234//protein complex	GO:0043169//cation binding;GO:0004721//phosphoprotein phosphatase activity	GO:0006464//cellular protein modification process	K17506//protein phosphatase 1L [EC:3.1.3.16]	gi|460376774|ref|XP_004234171.1|//PREDICTED: probable protein phosphatase 2C 76 [Solanum lycopersicum];gi|697149645|ref|XP_009629031.1|//PREDICTED: probable protein phosphatase 2C 76 isoform X1 [Nicotiana tomentosiformis]
Solyc05g006070.3.1	1220	823.714214736979	183.867125278481	-2.16348033076227	0.00039582077913679	Down	7.95093998348054e-05	NA	NA	NA	NA	gi|460386038|ref|XP_004238707.1|//PREDICTED: putative uncharacterized protein DDB_G0270496 [Solanum lycopersicum]
Solyc09g008175.1.1	387	0.411876652572909	12.6149676103737	4.9367803432361	0.000905647294202138	Up	0.000199464406831797	NA	NA	NA	K14488//SAUR family protein	gi|460402259|ref|XP_004246631.1|//PREDICTED: auxin-induced protein X10A-like [Solanum lycopersicum]
Solyc04g009300.3.1	4186	1804.67801443106	354.646197644705	-2.34728907361796	4.23723503218633e-22	Down	6.33342495865036e-24	NA	NA	NA	K13427//nitric-oxide synthase, plant [EC:1.14.13.39];K13457//disease resistance protein RPM1	gi|256260666|gb|ACU65455.1|//Rpi protein [Solanum sp. ABPT];gi|460382217|ref|XP_004236836.1|//PREDICTED: uncharacterized protein LOC101262407 [Solanum lycopersicum]
Solyc02g080440.3.1	1897	2365.60480569786	618.461411291521	-1.93545359278	0.00342897155686942	Down	0.000874497666322519	NA	NA	GO:0031163//metallo-sulfur cluster assembly	K09015//Fe-S cluster assembly protein SufD;K07033//uncharacterized protein;K20867	gi|460373836|ref|XP_004232719.1|//PREDICTED: UPF0051 protein ABCI8, chloroplastic [Solanum lycopersicum]
Solyc03g006020.3.1	729	117.721248404789	265.695977524995	1.17440163957403	0.0410814680475254	Up	0.0148211991739039	NA	NA	NA	NA	gi|460376585|ref|XP_004234078.1|//PREDICTED: ubiquitin domain-containing protein 1-like [Solanum lycopersicum]
Solyc05g051710.3.1	708	224.528308755868	94.195072233954	-1.25317385979498	0.00302798937679496	Down	0.000760375541914353	NA	NA	NA	NA	gi|723702236|ref|XP_010321473.1|//PREDICTED: uncharacterized protein LOC101252490 isoform X1 [Solanum lycopersicum];gi|460388710|ref|XP_004240008.1|//PREDICTED: uncharacterized protein LOC101252490 isoform X2 [Solanum lycopersicum]
Solyc05g006920.3.1	2102	749.055907308381	228.460272156807	-1.71313008992085	0.00750222418751642	Down	0.00211800529283768	NA	NA	NA	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460386145|ref|XP_004238760.1|//PREDICTED: protein NRT1/ PTR FAMILY 2.13 [Solanum lycopersicum]
Solyc11g040040.2.1	1762	166.344199967809	49.7048289634993	-1.74271363812711	0.00094700832708533	Down	0.000209677555646595	NA	NA	NA	K10523//speckle-type POZ protein;K15283//solute carrier family 35, member E1	gi|460410561|ref|XP_004250695.1|//PREDICTED: BTB/POZ domain-containing protein At3g19850 [Solanum lycopersicum]
Solyc03g114000.3.1	1126	113.133051560404	1074.7245385819	3.24787455562562	1.68125357962474e-12	Up	7.75828213648213e-14	NA	GO:0046914//transition metal ion binding	NA	K09377//cysteine and glycine-rich protein	gi|460380786|ref|XP_004236135.1|//PREDICTED: LIM domain-containing protein WLIM1 [Solanum lycopersicum]
Solyc10g083440.1.1	1344	911.570663507156	44.8219368789475	-4.34607759790144	3.72750844018898e-51	Down	4.44611115573458e-54	NA	GO:0035251//UDP-glucosyltransferase activity	NA	K13269//kaempferol 3-O-beta-D-galactosyltransferase [EC:2.4.1.234];K10757//flavonol 3-O-glucosyltransferase [EC:2.4.1.91];K12930//anthocyanidin 3-O-glucosyltransferase [EC:2.4.1.115]	gi|460408022|ref|XP_004249447.1|//PREDICTED: anthocyanidin 3-O-glucosyltransferase-like [Solanum lycopersicum]
Solyc03g026200.3.1	1922	610.508277944685	212.765640243149	-1.52074566975291	0.000757674972997868	Down	0.000163520877205071	NA	NA	NA	K16908//chloroplast NAD(P)H dehydrogenase [EC:1.6.99.-]	gi|723679441|ref|XP_010317574.1|//PREDICTED: uncharacterized protein LOC101265513 isoform X1 [Solanum lycopersicum]
Solyc01g060050.2.1	6130	486.421772652207	173.386873337839	-1.48821312642021	0.0459512968951861	Down	0.0169465532831732	NA	NA	NA	K11797//PH-interacting protein	gi|970002539|ref|XP_015062018.1|//PREDICTED: uncharacterized protein LOC107007765 [Solanum pennellii];gi|723656947|ref|XP_010318937.1|//PREDICTED: bromodomain and WD repeat-containing protein 3 [Solanum lycopersicum]
Solyc06g068960.1.1	465	517.156074639472	12670.042883091	4.6146778541449	1.48314754858255e-14	Up	5.12760316786435e-16	NA	GO:0046872//metal ion binding	NA	K13448//calcium-binding protein CML	gi|970034673|ref|XP_015078662.1|//PREDICTED: calcium-binding allergen Ole e 8-like [Solanum pennellii]
Solyc05g006970.3.1	1160	297.888156104391	28.5446670813733	-3.38347762255704	4.68491174524543e-23	Down	6.40883632959994e-25	NA	NA	NA	K01728//pectate lyase [EC:4.2.2.2]	gi|460386151|ref|XP_004238763.1|//PREDICTED: uncharacterized protein LOC101255587 [Solanum lycopersicum]
Solyc07g005280.3.1	1020	36.0141185689447	15.1905631767235	-1.24538723786426	0.0346589612585382	Down	0.0121606084063896	NA	NA	NA	NA	NA
Solyc05g041920.3.1	1367	39.5686075596375	595.488891878412	3.9116463945076	4.6117711738677e-31	Up	3.12860576130879e-33	NA	NA	NA	K11592//endoribonuclease Dicer [EC:3.1.26.-]	gi|460389032|ref|XP_004240163.1|//PREDICTED: ribonuclease 3-like protein 3 [Solanum lycopersicum]
Solyc03g026170.3.1	1772	977.452309325197	365.063435274015	-1.42087913811678	0.00290500114619377	Down	0.000725708874377167	NA	NA	NA	K20783	gi|460377159|ref|XP_004234362.1|//PREDICTED: F-box protein PP2-A13-like [Solanum lycopersicum];gi|460377157|ref|XP_004234361.1|//PREDICTED: F-box protein At4g00755-like [Solanum lycopersicum]
Solyc12g043020.2.1	2445	1822.65678456691	882.434710757994	-1.04648147434892	0.0317304898074829	Down	0.0110006443156179	NA	NA	NA	K01687//dihydroxy-acid dehydratase [EC:4.2.1.9]	gi|460413934|ref|XP_004252330.1|//PREDICTED: dihydroxy-acid dehydratase, chloroplastic-like [Solanum lycopersicum]
Solyc06g082420.3.1	2218	245.98234364265	27.6362982696857	-3.1539184714229	1.01347173137116e-06	Down	1.19336409698878e-07	NA	GO:0016209//antioxidant activity;GO:0005506//iron ion binding;GO:0003824//catalytic activity	GO:0008152//metabolic process;GO:0006950//response to stress	K00430//peroxidase [EC:1.11.1.7];K14794//ribosomal RNA-processing protein 12	gi|460393789|ref|XP_004242491.1|//PREDICTED: uncharacterized protein LOC101248212 [Solanum lycopersicum]
Solyc02g080490.3.1	2711	409.512170886653	108.611839599575	-1.91472495250253	4.10438569276336e-11	Down	2.33767009786134e-12	GO:0044464//cell part	GO:0015291//secondary active transmembrane transporter activity	GO:0015893//drug transport	K03327//multidrug resistance protein, MATE family	gi|460373828|ref|XP_004232715.1|//PREDICTED: protein TRANSPARENT TESTA 12-like [Solanum lycopersicum]
Solyc08g079200.1.1	408	552.191689170265	1374.53984292654	1.31570764621482	0.00444405730091446	Up	0.00117180786292936	NA	NA	NA	K02883//large subunit ribosomal protein L18e;K11855//ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12]	gi|460400413|ref|XP_004245729.1|//PREDICTED: 14 kDa proline-rich protein DC2.15-like [Solanum lycopersicum]
Solyc01g108340.3.1	1600	608.822262745766	204.76294041969	-1.57206648583872	1.76664975672197e-07	Down	1.79838992306833e-08	NA	GO:0003755//peptidyl-prolyl cis-trans isomerase activity;GO:0016859//cis-trans isomerase activity	GO:0044267//cellular protein metabolic process;GO:0006457//protein folding;GO:0000413//protein peptidyl-prolyl isomerization	K05864//peptidyl-prolyl isomerase D [EC:5.2.1.8]	gi|698525283|ref|XP_009759456.1|//PREDICTED: peptidyl-prolyl cis-trans isomerase CYP40 isoform X1 [Nicotiana sylvestris];gi|460369907|ref|XP_004230798.1|//PREDICTED: peptidyl-prolyl cis-trans isomerase CYP40 [Solanum lycopersicum]
Solyc06g069130.3.1	3893	13.1192823066502	423.275624305962	5.01183670453062	4.06343238822777e-21	Up	6.64919792169372e-23	NA	NA	NA	K10406//kinesin family member C2/C3	gi|723708832|ref|XP_010322612.1|//PREDICTED: kinesin-4-like isoform X2 [Solanum lycopersicum];gi|723708837|ref|XP_010322613.1|//PREDICTED: kinesin-4-like isoform X3 [Solanum lycopersicum];gi|723708823|ref|XP_010322609.1|//PREDICTED: kinesin-4-like isoform X1 [Solanum lycopersicum]
Solyc10g085100.2.1	1992	3699.07679336652	357.90034291104	-3.36953542018864	1.29708110089158e-13	Down	5.07654374510271e-15	NA	NA	NA	K06119//sulfoquinovosyltransferase [EC:2.4.1.-]	gi|460408292|ref|XP_004249580.1|//PREDICTED: uncharacterized protein LOC101249508 [Solanum lycopersicum]
Solyc12g096920.1.1	3338	40.5231062260554	296.133102706859	2.86942909791081	4.79397283179458e-12	Up	2.35517227982155e-13	NA	NA	NA	K13457//disease resistance protein RPM1	gi|723753314|ref|XP_010314773.1|//PREDICTED: probable disease resistance RPP8-like protein 2 isoform X1 [Solanum lycopersicum]
Solyc08g007770.3.1	1506	789.620892671608	314.471660906054	-1.3282301504407	1.59523969649102e-05	Down	2.36360436616662e-06	NA	NA	NA	K20628	gi|460398088|ref|XP_004244596.1|//PREDICTED: PGR5-like protein 1B, chloroplastic [Solanum lycopersicum]
Solyc08g014010.3.1	2086	19.0672622460531	230.069445190451	3.59289978073307	1.50677816736807e-15	Up	4.53808244831296e-17	GO:0016021//integral component of membrane	NA	NA	NA	gi|460398401|ref|XP_004244749.1|//PREDICTED: uncharacterized protein LOC101249108 [Solanum lycopersicum]
Solyc05g010260.3.1	1810	1255.50420354112	3023.89257766056	1.26814003052669	0.000405573614711817	Up	8.17254719372328e-05	GO:0042579//microbody	GO:0016616//oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;GO:0000166//nucleotide binding;GO:0048037//cofactor binding	GO:0006007//glucose catabolic process;GO:0006970//response to osmotic stress	K00033//6-phosphogluconate dehydrogenase [EC:1.1.1.44 1.1.1.343]	gi|460386607|ref|XP_004238989.1|//PREDICTED: 6-phosphogluconate dehydrogenase, decarboxylating 3 [Solanum lycopersicum]
Solyc03g005760.1.1	916	98798.0171668832	4818.89934170639	-4.35770651668551	6.19239542668322e-10	Down	4.24936632642158e-11	GO:0031224//intrinsic component of membrane;GO:0009521//photosystem;GO:0009534//chloroplast thylakoid	GO:0043169//cation binding;GO:0046906//tetrapyrrole binding	GO:0006464//cellular protein modification process;GO:0006091//generation of precursor metabolites and energy	K08912//light-harvesting complex II chlorophyll a/b binding protein 1	gi|723678681|ref|XP_010317413.1|//PREDICTED: chlorophyll a-b binding protein 3A, chloroplastic-like [Solanum lycopersicum];gi|302143545|emb|CBI22106.3|//unnamed protein product [Vitis vinifera];gi|970007787|ref|XP_015064801.1|//PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like [Solanum pennellii]
Solyc07g006640.3.1	1803	735.784025860575	1546.6811918269	1.07182159297471	2.37911530938401e-05	Up	3.66604394252032e-06	GO:0044464//cell part	GO:0032561//guanyl ribonucleotide binding	GO:0035556//intracellular signal transduction	K07942//ADP-ribosylation factor-like protein 1	gi|460394157|ref|XP_004242671.1|//PREDICTED: ADP-ribosylation factor 1 [Solanum lycopersicum]
Solyc03g119540.3.1	1484	1786.02864443139	120.996077618578	-3.88372303376128	2.92625392840158e-25	Down	3.11953415656349e-27	NA	NA	NA	K12135//zinc finger protein CONSTANS	gi|460380118|ref|XP_004235805.1|//PREDICTED: zinc finger protein CONSTANS-LIKE 16-like [Solanum lycopersicum]
BGI_novel_G000057	5994	943.288963020007	14419.4028354665	3.93416782037708	7.0790605896136e-08	Up	6.73725960108566e-09	NA	NA	NA	K13024//inositol-hexakisphosphate/diphosphoinositol-pentakisphosphate 1-kinase [EC:2.7.4.24]	gi|970025289|ref|XP_015073957.1|//PREDICTED: uncharacterized protein LOC107018095 [Solanum pennellii]
Solyc07g056020.3.1	4023	16402.8047472354	1745.77597814674	-3.23200217902236	1.74643352290641e-27	Down	1.52978931669526e-29	NA	GO:0000166//nucleotide binding	GO:0006412//translation	K02519//translation initiation factor IF-2	gi|460395310|ref|XP_004243227.1|//PREDICTED: translation initiation factor IF-2, chloroplastic [Solanum lycopersicum]
Solyc09g008020.3.1	2053	330.914151385393	1012.66754878682	1.61363173158466	7.78460453756487e-06	Up	1.08638584272562e-06	NA	NA	NA	K13717//OTU domain-containing protein 3 [EC:3.4.19.12];K16743//abnormal spindle-like microcephaly-associated protein	gi|460402285|ref|XP_004246644.1|//PREDICTED: OTU domain-containing protein DDB_G0284757 [Solanum lycopersicum]
Solyc02g093960.3.1	2919	0.730912643285586	14.6715780578138	4.32718125427915	0.000739300411718435	Up	0.000159086822605134	NA	NA	NA	NA	gi|723668954|ref|XP_010315924.1|//PREDICTED: BRO1 domain-containing protein BROX homolog isoform X2 [Solanum lycopersicum]
Solyc02g089150.3.1	1635	89.3978259026876	7.80006167909204	-3.51868230916185	4.47603211435117e-10	Down	3.00148418581994e-11	NA	GO:0004620//phospholipase activity;GO:0042578//phosphoric ester hydrolase activity	GO:0007165//signal transduction;GO:0044238//primary metabolic process	NA	gi|460372646|ref|XP_004232139.1|//PREDICTED: PI-PLC X domain-containing protein At5g67130 [Solanum lycopersicum]
BGI_novel_G000163	967	124.429414737747	1022.71224403569	3.0390007978877	2.06555612977842e-10	Up	1.31195305097004e-11	NA	NA	NA	NA	gi|697155229|ref|XP_009631852.1|//PREDICTED: uncharacterized protein LOC104121539 [Nicotiana tomentosiformis]
Solyc03g032020.3.1	2507	195.033836715372	668.070171793166	1.77627520534899	0.000142012029276734	Up	2.57736905676316e-05	GO:0031224//intrinsic component of membrane;GO:0043231//intracellular membrane-bounded organelle;GO:0031090//organelle membrane	GO:0016616//oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;GO:0000166//nucleotide binding;GO:0048037//cofactor binding	GO:0006732//coenzyme metabolic process;GO:0006720//isoprenoid metabolic process	K00021//hydroxymethylglutaryl-CoA reductase (NADPH) [EC:1.1.1.34]	gi|723680022|ref|XP_010317674.1|//PREDICTED: 3-hydroxy-3-methylglutaryl-coenzyme A reductase 3-like [Solanum lycopersicum]
Solyc03g118830.3.1	3484	1321.47145423017	479.404512807115	-1.46282986616361	0.000112062225544759	Down	1.98118061636645e-05	GO:0016021//integral component of membrane;GO:0005737//cytoplasm	GO:0016627//oxidoreductase activity, acting on the CH-CH group of donors	GO:0055114//oxidation-reduction process;GO:0006629//lipid metabolic process	K07976//Rab family, other;K07904//Ras-related protein Rab-11A	gi|460380074|ref|XP_004235783.1|//PREDICTED: uncharacterized protein LOC101247900 isoform X1 [Solanum lycopersicum]
Solyc05g024290.3.1	2615	930.259791390131	2584.75739141733	1.47432329818383	0.000108139248121469	Up	1.90336040565669e-05	NA	NA	NA	K13430//serine/threonine-protein kinase PBS1 [EC:2.7.11.1]	gi|970030784|ref|XP_015076677.1|//PREDICTED: serine/threonine-protein kinase PBS1 [Solanum pennellii]
Solyc10g007390.3.1	1913	1622.76143690765	6621.95917209255	2.02880719173221	2.1742124508356e-06	Up	2.71817077683861e-07	GO:0044464//cell part	GO:0008320//protein transmembrane transporter activity	GO:0006810//transport	K10956//protein transport protein SEC61 subunit alpha	gi|460405545|ref|XP_004248236.1|//PREDICTED: protein transport protein Sec61 subunit alpha-like [Solanum lycopersicum]
Solyc04g014460.3.1	2014	2775.40778858286	6885.54877721262	1.31087188038636	4.83044189420927e-07	Up	5.30974099672847e-08	NA	NA	NA	K12881//THO complex subunit 4	gi|970024376|ref|XP_015073499.1|//PREDICTED: THO complex subunit 4D [Solanum pennellii]
Solyc12g009630.2.1	534	74.5170579070937	27.5448867422723	-1.43578618380474	0.00341810065142313	Down	0.000871470421042724	NA	NA	NA	K13448//calcium-binding protein CML;K01148//poly(A)-specific ribonuclease [EC:3.1.13.4]	gi|460412687|ref|XP_004251729.1|//PREDICTED: calmodulin-like protein 3 [Solanum lycopersicum]
Solyc09g011160.3.1	8786	712.335727253687	192.22757301917	-1.88974206023241	0.000111947764447532	Down	1.97873974582599e-05	NA	NA	NA	K08867//WNK lysine deficient protein kinase [EC:2.7.11.1];K10615//E3 ubiquitin-protein ligase HERC4 [EC:2.3.2.26]	gi|930425288|ref|NP_001234845.2|//Prf interactor 30137 [Solanum lycopersicum];gi|723727315|ref|XP_010325838.1|//PREDICTED: ultraviolet-B receptor UVR8 isoform X2 [Solanum lycopersicum];gi|723727312|ref|XP_010325837.1|//PREDICTED: ultraviolet-B receptor UVR8 isoform X1 [Solanum lycopersicum]
Solyc04g016230.3.1	1748	474.051814495257	2642.62477453728	2.47885493035925	0.00019246974519372	Up	3.6100632093887e-05	NA	NA	NA	K13495//cis-zeatin O-glucosyltransferase [EC:2.4.1.215]	gi|460381722|ref|XP_004236592.1|//PREDICTED: zeatin O-xylosyltransferase-like [Solanum lycopersicum]
Solyc03g096550.3.1	825	0.965086586682247	54.5351088804782	5.82038311860536	1.62412443400533e-06	Up	1.98929211649825e-07	NA	NA	NA	NA	gi|970014781|ref|XP_015068389.1|//PREDICTED: lipoxygenase homology domain-containing protein 1-like [Solanum pennellii];gi|460379019|ref|XP_004235262.1|//PREDICTED: lipoxygenase homology domain-containing protein 1-like [Solanum lycopersicum]
Solyc04g011500.3.1	1585	6227.5809378761	1537.5908973185	-2.01800016647322	5.64447433290014e-09	Down	4.49613897771269e-10	GO:0043232//intracellular non-membrane-bounded organelle	GO:0032559//adenyl ribonucleotide binding	NA	K10355//actin, other eukaryote	gi|460382038|ref|XP_004236747.1|//PREDICTED: actin-97 [Solanum lycopersicum]
Solyc03g083190.2.1	3584	432.018969668367	167.266905549103	-1.36894263115435	0.000747814659863166	Down	0.000161096161235114	NA	NA	NA	NA	gi|970015594|ref|XP_015068858.1|//PREDICTED: uncharacterized protein LOC107013466 [Solanum pennellii];gi|723682193|ref|XP_010318021.1|//PREDICTED: uncharacterized protein LOC101253262 [Solanum lycopersicum]
BGI_novel_G000170	638	213.31728509386	2.00795833840029	-6.73112772551244	2.72683123988088e-11	Down	1.51242168068538e-12	NA	NA	NA	K14827//pre-rRNA-processing protein IPI1;K00430//peroxidase [EC:1.11.1.7]	gi|971549389|ref|XP_015163938.1|//PREDICTED: protein app1-like [Solanum tuberosum]
Solyc04g079100.3.1	4555	816.574283136556	308.129029399414	-1.4060495249	0.00939029588372435	Down	0.0027259439519325	NA	NA	NA	K15728//phosphatidate phosphatase LPIN [EC:3.1.3.4]	gi|723696636|ref|XP_010320534.1|//PREDICTED: uncharacterized protein LOC101261812 [Solanum lycopersicum]
Solyc02g093140.3.1	2657	1848.43416212612	568.789789506377	-1.70033618615028	3.29328453936668e-14	Down	1.19809367467641e-15	NA	NA	NA	NA	gi|460372084|ref|XP_004231863.1|//PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like isoform X3 [Solanum lycopersicum];gi|723669277|ref|XP_010315975.1|//PREDICTED: CBS domain-containing protein CBSX1, chloroplastic-like isoform X1 [Solanum lycopersicum]
Solyc01g081460.3.1	1532	217.941458609086	42.7226634204275	-2.35086716825002	0.000278689966492861	Down	5.41008403718064e-05	NA	NA	NA	K03439//tRNA (guanine-N7-)-methyltransferase [EC:2.1.1.33]	gi|460367356|ref|XP_004229540.1|//PREDICTED: tRNA (guanine-N(7)-)-methyltransferase [Solanum lycopersicum]
Solyc02g082030.3.1	1776	1057.76388883454	483.864910770924	-1.12834140311577	1.87338482773653e-05	Down	2.81971014899932e-06	NA	NA	NA	NA	gi|460373620|ref|XP_004232613.1|//PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 2, chloroplastic [Solanum lycopersicum]
Solyc01g110600.2.1	495	21.779197882566	0.79937237174098	-4.76793930047976	0.00018675224220439	Down	3.48541999671009e-05	NA	NA	NA	K14488//SAUR family protein	gi|969999621|ref|XP_015083989.1|//PREDICTED: auxin-induced protein 15A-like [Solanum pennellii]
Solyc03g031990.3.1	1711	366.703047822488	146.694092734034	-1.32180148105581	0.0160187920007211	Down	0.00498489284461873	GO:0016021//integral component of membrane	NA	GO:0055085//transmembrane transport	K07088//uncharacterized protein	gi|460377438|ref|XP_004234500.1|//PREDICTED: uncharacterized transporter YBR287W-like [Solanum lycopersicum]
Solyc05g016120.2.1	696	258.402730060497	1656.55027267677	2.68048876922447	0.0134921457603279	Up	0.00410075132435193	GO:0031224//intrinsic component of membrane;GO:0009521//photosystem;GO:0009534//chloroplast thylakoid;GO:0042716//plasma membrane-derived chromatophore	GO:0009055//electron carrier activity;GO:0046914//transition metal ion binding	GO:0009767//photosynthetic electron transport chain;GO:0006950//response to stress;GO:0051234//establishment of localization	K02703//photosystem II P680 reaction center D1 protein [EC:1.10.3.9]	gi|940008|gb|AAA74185.1|//photosystem II protein D1 [Solanum nigrum]
Solyc09g074420.3.1	2437	1769.40782942548	577.353409673919	-1.61574001488013	2.85838906717904e-10	Down	1.85183511684109e-11	NA	GO:0004252//serine-type endopeptidase activity	GO:0006508//proteolysis	K08669//HtrA serine peptidase 2 [EC:3.4.21.108]	gi|460403992|ref|XP_004247469.1|//PREDICTED: protease Do-like 2, chloroplastic [Solanum lycopersicum];gi|970053162|ref|XP_015088213.1|//PREDICTED: protease Do-like 2, chloroplastic [Solanum pennellii]
Solyc08g013845.1.1	1323	177.088036028383	27.1018718597369	-2.70800234415129	4.28594029517701e-06	Down	5.62980975108237e-07	NA	NA	NA	K13080//flavanone 7-O-glucoside 2''-O-beta-L-rhamnosyltransferase [EC:2.4.1.236];K18823//soyasaponin III rhamnosyltransferase [EC:2.4.1.273]	gi|460398541|ref|XP_004244816.1|//PREDICTED: crocetin glucoside glucosyltransferase-like [Solanum lycopersicum]
Solyc03g007750.3.1	1384	151.030106913859	310.517187325899	1.03983695423786	0.00622971946256573	Up	0.00171498019837359	NA	NA	NA	K11418//histone deacetylase 11 [EC:3.5.1.98]	gi|460376842|ref|XP_004234205.1|//PREDICTED: F-box protein At5g52880 [Solanum lycopersicum]
Solyc03g114130.1.1	426	323.219368954468	91.3573896865381	-1.82292031940327	2.18354084041037e-06	Down	2.73064690605964e-07	NA	NA	NA	NA	gi|460380758|ref|XP_004236121.1|//PREDICTED: uncharacterized protein LOC101250679 [Solanum lycopersicum]
Solyc03g007370.3.1	2455	3374.99064350255	349.64921111289	-3.27090334732052	7.09395763182095e-09	Down	5.73006045480692e-10	NA	NA	GO:0006351//transcription, DNA-templated	K03093//RNA polymerase sigma factor	gi|460376790|ref|XP_004234179.1|//PREDICTED: RNA polymerase sigma factor sigE, chloroplastic/mitochondrial isoform X1 [Solanum lycopersicum];gi|460376792|ref|XP_004234180.1|//PREDICTED: RNA polymerase sigma factor sigE, chloroplastic/mitochondrial isoform X2 [Solanum lycopersicum]
Solyc10g076600.2.1	1965	375.112646895026	759.29443834882	1.0173355366349	0.0276977524808841	Up	0.00939088849582981	NA	NA	NA	K00232//acyl-CoA oxidase [EC:1.3.3.6]	gi|460407260|ref|XP_004249072.1|//PREDICTED: acyl-coenzyme A oxidase 4, peroxisomal [Solanum lycopersicum]
Solyc07g061790.3.1	2088	8443.63237096292	251.855878197501	-5.06719345793393	8.83376985050578e-26	Down	9.18675185735467e-28	NA	NA	NA	K11855//ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12]	gi|460397526|ref|XP_004244318.1|//PREDICTED: heme-binding protein 2 [Solanum lycopersicum]
Solyc11g068820.2.1	1012	14057.8662227362	3875.45833231543	-1.85893878476782	2.29568318870827e-09	Down	1.71996541274177e-10	GO:0030529//intracellular ribonucleoprotein complex;GO:0009536//plastid	GO:0005198//structural molecule activity	GO:0010467//gene expression	K02899//large subunit ribosomal protein L27	gi|970063445|ref|XP_015058653.1|//PREDICTED: 50S ribosomal protein L27, chloroplastic [Solanum pennellii]
Solyc08g079000.3.1	618	25.686503953271	4.77966812267458	-2.42602819348454	0.00471404531965217	Down	0.0012507296326705	NA	NA	NA	NA	gi|460400441|ref|XP_004245743.1|//PREDICTED: uncharacterized protein LOC101248807 [Solanum lycopersicum]
Solyc07g052430.3.1	965	559.546497268161	196.701823219705	-1.50824769149553	0.00549687755716086	Down	0.00148711559974182	NA	NA	NA	NA	gi|460395790|ref|XP_004243464.1|//PREDICTED: transmembrane protein 97-like [Solanum lycopersicum]
Solyc11g006370.2.1	2645	616.019643823675	1556.70347750006	1.33744590266305	0.000606934501609375	Up	0.000128069785806272	NA	GO:0046872//metal ion binding;GO:0004674//protein serine/threonine kinase activity;GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0005509//calcium ion binding	GO:0006464//cellular protein modification process;GO:0006468//protein phosphorylation	K13412//calcium-dependent protein kinase [EC:2.7.11.1]	gi|460409005|ref|XP_004249931.1|//PREDICTED: calcium-dependent protein kinase 1 [Solanum lycopersicum]
Solyc02g087470.3.1	5004	515.795227981929	1266.04068927668	1.29545344146065	2.65817866066207e-06	Up	3.38784585703213e-07	GO:0016020//membrane	GO:0016301//kinase activity	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460372883|ref|XP_004232252.1|//PREDICTED: probable inactive receptor kinase At1g27190 [Solanum lycopersicum]
Solyc02g079150.2.1	1715	7.45005478505308	35.6143048542287	2.25713389120409	0.0037442384703012	Up	0.000967880341118936	NA	NA	NA	NA	gi|460376057|ref|XP_004233817.1|//PREDICTED: F-box protein At1g61340 [Solanum lycopersicum]
Solyc03g124110.2.1	867	253.754609695208	5092.55136050263	4.32688268986133	3.7876940659325e-08	Up	3.42230893686461e-09	GO:0043231//intracellular membrane-bounded organelle	GO:0001071//nucleic acid binding transcription factor activity;GO:0003676//nucleic acid binding	GO:0006351//transcription, DNA-templated	K09286//EREBP-like factor	gi|460377135|ref|XP_004234350.1|//PREDICTED: dehydration-responsive element-binding protein 1A [Solanum lycopersicum]
Solyc07g056100.1.1	564	0.429356269269703	23.8333332460251	5.79466166813908	2.53853570548126e-05	Up	3.9277850430344e-06	NA	NA	NA	NA	NA
Solyc05g008290.3.1	2190	2202.77773970722	176.411503935176	-3.64230738606779	1.35921907343134e-08	Down	1.1445042071274e-09	NA	GO:0016634//oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor;GO:0046914//transition metal ion binding	GO:0008152//metabolic process	NA	gi|460386334|ref|XP_004238853.1|//PREDICTED: multicopper oxidase LPR2 [Solanum lycopersicum]
Solyc04g008990.3.1	1230	724.4803041445	156.432994853508	-2.21140163090514	1.06414467540879e-18	Down	2.25696406853884e-20	NA	NA	NA	NA	gi|460382255|ref|XP_004236855.1|//PREDICTED: FAD synthetase 1, chloroplastic [Solanum lycopersicum]
Solyc12g006530.2.1	2892	886.10160377181	32.1700996598924	-4.78367982271071	3.28333468676415e-27	Down	2.9984232826048e-29	NA	GO:0016853//isomerase activity	NA	K15813//beta-amyrin synthase [EC:5.4.99.39]	gi|723746887|ref|XP_010313624.1|//PREDICTED: beta-amyrin synthase isoform X1 [Solanum lycopersicum]
Solyc05g008210.3.1	915	52.2605414897097	2194.19038043885	5.39182282437283	7.85721110170662e-37	Up	3.25089619908094e-39	NA	NA	NA	NA	gi|460386322|ref|XP_004238847.1|//PREDICTED: uncharacterized protein At1g66480-like [Solanum lycopersicum]
Solyc09g083330.3.1	1717	773.558581914797	190.385143991563	-2.02258964410356	1.56195808565584e-09	Down	1.14055311234523e-10	GO:0031224//intrinsic component of membrane;GO:0016021//integral component of membrane;GO:0005789//endoplasmic reticulum membrane	GO:0070567//cytidylyltransferase activity;GO:0004605//phosphatidate cytidylyltransferase activity	GO:0006655//phosphatidylglycerol biosynthetic process;GO:0006644//phospholipid metabolic process;GO:0016024//CDP-diacylglycerol biosynthetic process	K00981//phosphatidate cytidylyltransferase [EC:2.7.7.41]	gi|698461962|ref|XP_009781888.1|//PREDICTED: phosphatidate cytidylyltransferase-like [Nicotiana sylvestris];gi|460404347|ref|XP_004247644.1|//PREDICTED: phosphatidate cytidylyltransferase-like [Solanum lycopersicum]
Solyc05g011960.3.1	4060	470.372402516756	5824.02685678792	3.63014168576434	3.68623619363915e-19	Up	7.46095964345481e-21	NA	NA	NA	K15639//PHYB activation tagged suppressor 1 [EC:1.14.-.-]	gi|723698411|ref|XP_010320844.1|//PREDICTED: uncharacterized protein LOC101261118 [Solanum lycopersicum];gi|460386682|ref|XP_004239025.1|//PREDICTED: cytochrome P450 CYP749A22-like [Solanum lycopersicum]
Solyc01g103060.3.1	728	19.7937721577567	1.35322152439232	-3.87057664215041	0.00409520248404921	Down	0.00106928930225006	GO:0031224//intrinsic component of membrane	NA	NA	NA	gi|460369129|ref|XP_004230416.1|//PREDICTED: lipid transfer-like protein VAS [Solanum lycopersicum]
BGI_novel_G000465	808	4.82877985620248	42.9438595546739	3.15272126067252	0.00360035676048391	Up	0.000926392676219638	NA	NA	NA	NA	gi|970057421|ref|XP_015055360.1|//PREDICTED: uncharacterized protein LOC107001919 [Solanum pennellii]
Solyc04g077340.3.1	3667	148.359807696919	64.7846531711786	-1.19537630410383	0.0149167291976735	Down	0.00459827561906663	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723694995|ref|XP_004238059.2|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 isoform X2 [Solanum lycopersicum]
Solyc09g010630.3.1	2421	24813.8337039341	146826.844535734	2.56489921002986	6.49653443351674e-15	Up	2.11401318043094e-16	NA	GO:0032559//adenyl ribonucleotide binding;GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	GO:0008152//metabolic process;GO:0050896//response to stimulus	K03283//heat shock 70kDa protein 1/8	gi|460401797|ref|XP_004246402.1|//PREDICTED: heat shock cognate 70 kDa protein 2-like [Solanum lycopersicum]
Solyc01g105700.3.1	3674	910.445808798461	374.436653945005	-1.28185147965877	0.00234997094017799	Down	0.000571901008961611	NA	NA	NA	NA	gi|460369524|ref|XP_004230612.1|//PREDICTED: transcription factor bHLH143-like [Solanum lycopersicum]
Solyc02g078820.3.1	2027	363.255999523692	1545.62326821382	2.08913018748579	1.03524377458346e-12	Up	4.61900550982706e-14	GO:0016021//integral component of membrane	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K03252//translation initiation factor 3 subunit C;K19995//secretory carrier-associated membrane protein	gi|460374049|ref|XP_004232824.1|//PREDICTED: uncharacterized protein LOC101260688 [Solanum lycopersicum]
Solyc01g088750.3.1	1031	66.2938835939502	24.9822703199158	-1.40797117949794	0.0344747862056958	Down	0.0120882776888691	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial	gi|460367727|ref|XP_004229722.1|//PREDICTED: pentatricopeptide repeat-containing protein At1g69290-like [Solanum lycopersicum]
Solyc02g067050.3.1	1171	1064.41250047635	7.9638700360203	-7.06237196564342	6.04464941307295e-37	Down	2.47842342119437e-39	NA	NA	NA	K07735//putative transcriptional regulator	gi|460375168|ref|XP_004233379.1|//PREDICTED: uncharacterized protein LOC101247689 [Solanum lycopersicum]
Solyc04g077280.3.1	4439	232.331577699827	499.820876013791	1.10522590614829	0.00616213966065246	Up	0.00169373855142579	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723694978|ref|XP_010320275.1|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 isoform X1 [Solanum lycopersicum]
Solyc11g006020.2.1	796	7600.69192087784	1264.67523525664	-2.58736380594402	7.69583920919607e-08	Down	7.37513143240014e-09	GO:0016020//membrane	GO:0016651//oxidoreductase activity, acting on NAD(P)H	GO:0008152//metabolic process	K17065//dynamin 1-like protein [EC:3.6.5.5]	gi|970063562|ref|XP_015058716.1|//PREDICTED: NAD(P)H-quinone oxidoreductase subunit O, chloroplastic isoform X1 [Solanum pennellii]
Solyc02g071820.3.1	3347	559.004326616941	5490.39383197116	3.29597828455342	1.79530735722831e-09	Up	1.320984316076e-10	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|723675391|ref|XP_010316866.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g07650 [Solanum lycopersicum]
Solyc06g052070.3.1	3627	455.378643678448	1378.52597274364	1.59798791060997	7.89591117360131e-06	Up	1.10368521324754e-06	NA	NA	NA	K20241//WD repeat-containing protein 44	gi|460390696|ref|XP_004240961.1|//PREDICTED: WD repeat-containing protein 44 [Solanum lycopersicum]
Solyc03g097050.3.1	3286	304.25876902638	669.84717829024	1.1385331473104	0.00247871262621357	Up	0.000607851884891124	GO:0031224//intrinsic component of membrane;GO:0016021//integral component of membrane	GO:0016760//cellulose synthase (UDP-forming) activity;GO:0016759//cellulose synthase activity	GO:0030244//cellulose biosynthetic process;GO:0045229//external encapsulating structure organization;GO:0071555//cell wall organization;GO:0009250//glucan biosynthetic process	K20924;K00770//1,4-beta-D-xylan synthase [EC:2.4.2.24]	gi|460379057|ref|XP_004235281.1|//PREDICTED: cellulose synthase-like protein D3 [Solanum lycopersicum];gi|703065524|ref|XP_010087475.1|//Cellulose synthase-like protein D3 [Morus notabilis]
Solyc04g078610.3.1	6163	2809.40889490455	747.376797580887	-1.91035893567905	8.93477483361272e-07	Down	1.03661972391804e-07	NA	NA	NA	K10395//kinesin family member 4/21/27	gi|723695271|ref|XP_010320319.1|//PREDICTED: chromosome-associated kinesin KIF4 isoform X2 [Solanum lycopersicum]
Solyc01g099090.3.1	3452	1119.56867408139	357.072854203181	-1.64865266047257	6.25374962426341e-06	Down	8.53864800718535e-07	GO:0043231//intracellular membrane-bounded organelle	GO:0004567//beta-mannosidase activity;GO:0015923//mannosidase activity;GO:0043167//ion binding	GO:0044238//primary metabolic process;GO:0005975//carbohydrate metabolic process	K18577//mannosylglycoprotein endo-beta-mannosidase [EC:3.2.1.152]	gi|460368694|ref|XP_004230200.1|//PREDICTED: mannosylglycoprotein endo-beta-mannosidase [Solanum lycopersicum]
Solyc01g102580.3.1	2066	3626.25645016116	1445.95938596498	-1.3264539260906	0.0128749437393818	Down	0.00388580659973812	NA	GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds	GO:0044238//primary metabolic process	K01179//endoglucanase [EC:3.2.1.4]	gi|350535529|ref|NP_001233943.1|//endo-1,4-beta-glucanase [Solanum lycopersicum]
Solyc07g065740.3.1	699	279.743466535356	921.104072326628	1.71925973342762	4.93980608597189e-07	Up	5.44284582903418e-08	NA	NA	NA	K06001//tryptophan synthase beta chain [EC:4.2.1.20]	gi|460396946|ref|XP_004244031.1|//PREDICTED: transmembrane protein 230 [Solanum lycopersicum]
Solyc07g052470.3.1	3282	49.4122054461421	134.015630274917	1.43946191730951	0.0369904354106222	Up	0.0131165205032522	GO:0005777//peroxisome	GO:0016833//oxo-acid-lyase activity	GO:0044262//cellular carbohydrate metabolic process;GO:0043436//oxoacid metabolic process;GO:0009060//aerobic respiration	K01637//isocitrate lyase [EC:4.1.3.1]	gi|922959962|ref|NP_001233878.2|//isocitrate lyase [Solanum lycopersicum]
Solyc01g090550.3.1	2039	174.219519940222	406.556139404516	1.22254830522038	8.31221939582108e-06	Up	1.16838300811247e-06	NA	GO:0046872//metal ion binding;GO:0005524//ATP binding;GO:0031072//heat shock protein binding;GO:0051082//unfolded protein binding	GO:0006457//protein folding;GO:0009408//response to heat	K09503//DnaJ homolog subfamily A member 2	gi|460367810|ref|XP_004229763.1|//PREDICTED: dnaJ protein homolog 2-like [Solanum lycopersicum]
Solyc08g062690.2.1	938	372.111911640682	1752.46721549678	2.23557897679175	0.000268308721415367	Up	5.19055562899118e-05	NA	GO:0016787//hydrolase activity	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|970043912|ref|XP_015083366.1|//PREDICTED: uncharacterized protein LOC107026794 [Solanum pennellii]
Solyc07g008140.3.1	1033	612.770251839956	4275.9946476245	2.80284188164683	0.000245404032431324	Up	4.70600269746169e-05	NA	NA	NA	K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6];K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723712802|ref|XP_010323300.1|//PREDICTED: cucumber peeling cupredoxin-like [Solanum lycopersicum]
Solyc05g050350.2.1	3094	75.9676272085965	1579.13236431287	4.37760353359493	1.14172077735463e-10	Up	6.92828919611352e-12	GO:0005887//integral component of plasma membrane	GO:0005249//voltage-gated potassium channel activity	GO:0071805//potassium ion transmembrane transport;GO:0042391//regulation of membrane potential	K05391//cyclic nucleotide gated channel, other eukaryote	gi|460389257|ref|XP_004240273.1|//PREDICTED: cyclic nucleotide-gated ion channel 1-like [Solanum lycopersicum]
Solyc07g041490.2.1	629	770.970146278082	241.043983399198	-1.67737857712086	5.02055628859641e-05	Down	8.21538769454981e-06	NA	NA	NA	K13346//peroxin-10	gi|723716917|ref|XP_010324012.1|//PREDICTED: uncharacterized protein LOC101256396 [Solanum lycopersicum]
Solyc03g116990.1.1	330	15.0404313423509	292.836708069811	4.28317856408739	7.92711029936838e-13	Up	3.48960685237589e-14	NA	NA	NA	K09481//protein transport protein SEC61 subunit beta	gi|971540092|ref|XP_015161643.1|//PREDICTED: protein transport protein Sec61 subunit beta-like isoform X1 [Solanum tuberosum]
Solyc08g075680.3.1	2128	232.724810519118	29.9046090247477	-2.9601852620379	1.05936776203506e-11	Down	5.50059375471461e-13	NA	NA	NA	K10352//myosin heavy chain	gi|723725935|ref|XP_010325618.1|//PREDICTED: uncharacterized protein LOC101268215 isoform X2 [Solanum lycopersicum]
Solyc02g086010.2.1	5545	594.303561992509	75.7718463735852	-2.97146621948715	3.86974310149472e-13	Down	1.62128792533177e-14	GO:0009507//chloroplast	GO:0004497//monooxygenase activity;GO:0016984//ribulose-bisphosphate carboxylase activity	GO:0019253//reductive pentose-phosphate cycle;GO:0009853//photorespiration;GO:0055114//oxidation-reduction process	K01054//acylglycerol lipase [EC:3.1.1.23];K01602//ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]	gi|822606574|ref|NP_001296139.1|//ribulose bisphosphate carboxylase small chain 3B, chloroplastic [Solanum lycopersicum];gi|723672014|ref|XP_010316333.1|//PREDICTED: uncharacterized protein LOC104645732 isoform X1 [Solanum lycopersicum]
Solyc07g041010.3.1	1347	310.46210430006	2001.19373605848	2.68837175595053	2.44228197350211e-06	Up	3.0897215662987e-07	GO:0030529//intracellular ribonucleoprotein complex;GO:0016021//integral component of membrane;GO:0022625//cytosolic large ribosomal subunit	GO:0005198//structural molecule activity;GO:0003735//structural constituent of ribosome	GO:0010467//gene expression;GO:0006412//translation	K14835//ribosomal RNA methyltransferase Nop2 [EC:2.1.1.-]	gi|460396341|ref|XP_004243734.1|//PREDICTED: uncharacterized protein LOC101261044 isoform X2 [Solanum lycopersicum];gi|970043378|ref|XP_015083091.1|//PREDICTED: uncharacterized protein LOC107026585 isoform X1 [Solanum pennellii]
Solyc03g006840.3.1	2886	305.033907423782	47.4587070513502	-2.68422491898901	9.47595096659743e-07	Down	1.10449152648539e-07	NA	NA	NA	NA	gi|723678987|ref|XP_010317454.1|//PREDICTED: uncharacterized protein LOC101266997 [Solanum lycopersicum]
Solyc09g015530.3.1	1808	277.811628986122	777.164743338092	1.48411346275032	1.45593172041844e-06	Up	1.76320342911865e-07	NA	NA	NA	NA	gi|460401559|ref|XP_004246288.1|//PREDICTED: uncharacterized protein LOC101261947 [Solanum lycopersicum]
Solyc01g080010.2.1	1537	83.4117139680613	1039.41951479032	3.63938423677802	1.77501969494756e-18	Up	3.83745125640966e-20	NA	GO:0004175//endopeptidase activity	GO:0019538//protein metabolic process	K00924;K02882//large subunit ribosomal protein L18Ae	gi|928197639|ref|NP_001234249.2|//xyloglucan-specific fungal endoglucanase inhibitor protein precursor [Solanum lycopersicum]
Solyc01g006670.2.1	1662	28.1575076486722	0.467612273398599	-5.91206303306646	1.76942859228344e-05	Down	2.64839334401195e-06	NA	GO:0016758//transferase activity, transferring hexosyl groups	NA	K13496//UDP-glucosyl transferase 73C [EC:2.4.1.-]	gi|460365546|ref|XP_004228662.1|//PREDICTED: UDP-glycosyltransferase 92A1-like [Solanum lycopersicum]
Solyc03g033540.3.1	2426	2062.91864199731	4323.79051614439	1.06760970254961	0.0199185706029146	Up	0.00640367047301844	GO:0031012//extracellular matrix	GO:0046872//metal ion binding;GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process;GO:0023052//signaling	K13412//calcium-dependent protein kinase [EC:2.7.11.1]	gi|350538611|ref|NP_001234607.1|//calcium-dependent protein kinase [Solanum lycopersicum]
Solyc02g089940.3.1	2951	1925.88913511375	959.201877371769	-1.00561826848083	0.0055996330791199	Down	0.00151929809090927	GO:0005634//nucleus	GO:0003677//DNA binding	GO:0006355//regulation of transcription, DNA-templated	K16670//homeobox protein Meis2;K15613//homeobox protein Meis1	gi|460372540|ref|XP_004232087.1|//PREDICTED: BEL1-like homeodomain protein 2 [Solanum lycopersicum]
BGI_novel_G000080	264	7.88519313043745	0.659962406282608	-3.57869034000869	0.0403177440123899	Down	0.014501689437279	NA	NA	NA	K15255//ATP-dependent DNA helicase PIF1 [EC:3.6.4.12]	gi|971587236|ref|XP_015161034.1|//PREDICTED: uncharacterized protein LOC107059121 [Solanum tuberosum]
Solyc06g066380.1.1	1326	230.474912086782	490.104801010924	1.08848056194842	0.000355602138264829	Up	7.06352987480719e-05	NA	NA	NA	K01074//palmitoyl-protein thioesterase [EC:3.1.2.22];K19589//release factor glutamine methyltransferase [EC:2.1.1.297];K11000//callose synthase [EC:2.4.1.-]	gi|723709374|ref|XP_010322701.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Solanum lycopersicum]
Solyc05g056520.3.1	1825	555.739825923483	101.858304734265	-2.4478460204564	1.52000856431693e-08	Down	1.28612622670323e-09	NA	NA	NA	K19787//carnosine N-methyltransferase [EC:2.1.1.22]	gi|723700898|ref|XP_010321302.1|//PREDICTED: UPF0586 protein C9orf41 homolog [Solanum lycopersicum];gi|970026796|ref|XP_015074712.1|//PREDICTED: carnosine N-methyltransferase-like isoform X1 [Solanum pennellii]
Solyc06g009280.1.1	3870	3.37191429635278	30.5309399251446	3.17863223201387	3.95067513794932e-05	Up	6.3380445034046e-06	NA	NA	NA	K05658//ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:3.6.3.44]	gi|723704431|ref|XP_010321859.1|//PREDICTED: ABC transporter B family member 21-like [Solanum lycopersicum]
Solyc04g007600.3.1	1990	191.71713643324	77.2522523203156	-1.31133039544444	0.00809624068433788	Down	0.00230320966538194	GO:0016021//integral component of membrane	GO:0008270//zinc ion binding	NA	K10661//E3 ubiquitin-protein ligase MARCH6 [EC:2.3.2.27]	gi|460382526|ref|XP_004236990.1|//PREDICTED: uncharacterized protein LOC101256764 [Solanum lycopersicum]
Solyc02g087770.3.1	2202	700.743164370812	1780.97525335085	1.34570979913606	0.000795528466174245	Up	0.000172461367201037	NA	NA	NA	K01785//aldose 1-epimerase [EC:5.1.3.3]	gi|970005710|ref|XP_015063696.1|//PREDICTED: aldose 1-epimerase [Solanum pennellii]
Solyc08g006750.3.1	1818	86.3376043088708	571.579667724179	2.72689363104354	6.37351839371202e-08	Up	6.01526337143239e-09	NA	GO:0016831//carboxy-lyase activity;GO:0048037//cofactor binding;GO:0016830//carbon-carbon lyase activity;GO:0030170//pyridoxal phosphate binding	GO:0019752//carboxylic acid metabolic process;GO:0043436//oxoacid metabolic process	K01590//histidine decarboxylase [EC:4.1.1.22]	gi|460397933|ref|XP_004244519.1|//PREDICTED: histidine decarboxylase [Solanum lycopersicum]
Solyc01g088160.3.1	2487	180.684833020859	62.3095588074627	-1.53595000228818	0.0363848503645362	Down	0.0128631223538797	NA	GO:0016645//oxidoreductase activity, acting on the CH-NH group of donors;GO:0050662//coenzyme binding	GO:0006725//cellular aromatic compound metabolic process	K00279//cytokinin dehydrogenase [EC:1.5.99.12]	gi|384081610|ref|NP_001244909.1|//cytokinin oxidase/dehydrogenase-like 2 [Solanum lycopersicum];gi|971546956|ref|XP_015163316.1|//PREDICTED: cytokinin oxidase/dehydrogenase isoform X2 [Solanum tuberosum]
Solyc08g077380.3.1	1762	306.827524389077	6.3924135811874	-5.58492334552682	1.23371674387303e-24	Down	1.44856409094977e-26	NA	NA	NA	NA	gi|460401329|ref|XP_004246178.1|//PREDICTED: probable purine permease 11 [Solanum lycopersicum]
Solyc10g055720.2.1	2332	1305.26262358555	552.467284876778	-1.24037917054814	5.10741439711006e-05	Down	8.37141778385981e-06	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity;GO:0031406//carboxylic acid binding	GO:0006464//cellular protein modification process	K04424//sterile alpha motif and leucine zipper containing kinase AZK [EC:2.7.11.25];K17535//serine/threonine-protein kinase TNNI3K [EC:2.7.11.1];K04365//B-Raf proto-oncogene serine/threonine-protein kinase [EC:2.7.11.1]	gi|460406375|ref|XP_004248640.1|//PREDICTED: serine/threonine-protein kinase HT1-like [Solanum lycopersicum]
Solyc06g008900.3.1	3236	197.948915497732	61.904837811026	-1.67700409893733	0.00190402982686272	Down	0.000452657754425617	NA	NA	NA	K11498//centromeric protein E;K19042//E3 ubiquitin-protein ligase BOI and related proteins [EC:2.3.2.27]	gi|723704329|ref|XP_010321841.1|//PREDICTED: putative E3 ubiquitin-protein ligase RF298 [Solanum lycopersicum]
Solyc04g016010.3.1	3186	101.222721992457	291.809175627803	1.52749207230572	0.00232422588089867	Up	0.000564336043990382	NA	NA	NA	K00384//thioredoxin reductase (NADPH) [EC:1.8.1.9]	gi|723688847|ref|XP_010319181.1|//PREDICTED: LOW QUALITY PROTEIN: thioredoxin reductase NTRC [Solanum lycopersicum];gi|970020475|ref|XP_015071469.1|//PREDICTED: thioredoxin reductase NTRC isoform X1 [Solanum pennellii]
Solyc09g015470.3.1	648	106.858107989106	14.6503790479201	-2.86668648143425	0.00853673471391483	Down	0.00244379464003526	GO:0009526//plastid envelope	NA	NA	NA	gi|460401684|ref|XP_004246347.1|//PREDICTED: uncharacterized protein LOC101255724 [Solanum lycopersicum]
Solyc11g068530.1.1	978	306.999335281554	78.5067846177064	-1.96734628852113	9.05526026864771e-05	Down	1.56546507849963e-05	NA	NA	NA	K13161//heterogeneous nuclear ribonucleoprotein R;K20642	gi|970060032|ref|XP_015056771.1|//PREDICTED: putative uncharacterized protein DDB_G0277255 [Solanum pennellii]
Solyc06g063030.3.1	1393	401.538478724488	1045.89488285938	1.38112771112726	4.63391435755764e-05	Up	7.51534269037323e-06	GO:0031224//intrinsic component of membrane;GO:0016021//integral component of membrane;GO:0031201//SNARE complex	GO:0000149//SNARE binding;GO:0005484//SNAP receptor activity	GO:0006810//transport;GO:0006906//vesicle fusion;GO:0006887//exocytosis	K08517//vesicle transport protein SEC22	gi|460392607|ref|XP_004241907.1|//PREDICTED: 25.3 kDa vesicle transport protein [Solanum lycopersicum]
Solyc09g091780.3.1	1636	800.234295728796	1990.2719141765	1.31447118271014	0.00145257254694019	Up	0.000334988308778849	GO:0043231//intracellular membrane-bounded organelle	GO:0016538//cyclin-dependent protein serine/threonine kinase regulator activity	GO:0022402//cell cycle process	K06624	gi|970048967|ref|XP_015085991.1|//PREDICTED: cyclin-dependent kinase inhibitor 4-like [Solanum pennellii]
Solyc06g066800.2.1	1340	1959.72184740302	5309.48223825074	1.43792228108396	0.0310841367896352	Up	0.0107373633760899	NA	NA	NA	K03768//peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]	gi|460392236|ref|XP_004241723.1|//PREDICTED: uncharacterized protein LOC101245769 [Solanum lycopersicum]
BGI_novel_G000527	2624	44.9606621684669	1.03028166357491	-5.44755257567849	0.000338225222061605	Down	6.69188712801179e-05	NA	NA	NA	K03549//KUP system potassium uptake protein	gi|31249765|gb|AAP46257.1|//putative polyprotein [Oryza sativa Japonica Group]
Solyc07g043400.1.1	204	24.5750113592452	2.88252210624499	-3.09178850626733	0.0225946181865591	Down	0.00742064935298092	NA	NA	NA	NA	gi|970041563|ref|XP_015082182.1|//PREDICTED: cellulose synthase-like protein G1 [Solanum pennellii]
Solyc03g112297.1.1	728	491.940028701621	1416.38417682793	1.525658276126	0.00933011928359294	Up	0.0027049973083266	NA	NA	NA	NA	gi|460381039|ref|XP_004236260.1|//PREDICTED: uncharacterized protein LOC101266924 isoform X1 [Solanum lycopersicum]
Solyc04g016520.3.1	5886	736.154359034978	1716.56095450182	1.22144087611928	0.000988288092086309	Up	0.000219333058755102	NA	NA	NA	K01001//UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase [EC:2.7.8.15]	gi|460381679|ref|XP_004236571.1|//PREDICTED: UDP-N-acetylglucosamine--dolichyl-phosphate N-acetylglucosaminephosphotransferase [Solanum lycopersicum]
Solyc11g012240.1.1	1062	237.854938488988	53.1143108725483	-2.16290944817314	0.00131145317415013	Down	0.000299021882595659	NA	NA	NA	NA	gi|723742150|ref|XP_010312743.1|//PREDICTED: acyl-CoA--sterol O-acyltransferase 1-like [Solanum lycopersicum]
Solyc02g087260.1.1	1011	174.987329498238	425.462278931498	1.28178076663466	0.0227157871241498	Up	0.00746721807991194	NA	NA	NA	K03695//ATP-dependent Clp protease ATP-binding subunit ClpB	gi|460372909|ref|XP_004232265.1|//PREDICTED: uncharacterized protein LOC101267183 [Solanum lycopersicum]
Solyc10g005500.3.1	2055	116.655884157168	25.1253069894563	-2.21504595027496	1.21681664358126e-06	Down	1.45502750581806e-07	NA	NA	NA	NA	gi|460405736|ref|XP_004248331.1|//PREDICTED: metal tolerance protein 9 [Solanum lycopersicum];gi|568881926|ref|XP_006493800.1|//PREDICTED: metal tolerance protein 9-like [Citrus sinensis]
Solyc02g069500.1.1	2562	226.711883745368	38.7212567869343	-2.54966233155492	7.26417243384755e-06	Down	1.00590430116832e-06	NA	NA	NA	K01176//alpha-amylase [EC:3.2.1.1]	gi|460374796|ref|XP_004233195.1|//PREDICTED: pentatricopeptide repeat-containing protein At4g21300 [Solanum lycopersicum]
Solyc06g048470.3.1	5022	1367.72434749216	503.224573305299	-1.44250321906121	0.0107006854649608	Down	0.0031534076072007	NA	NA	NA	NA	gi|723705672|ref|XP_010322107.1|//PREDICTED: uncharacterized protein LOC101246062 isoform X3 [Solanum lycopersicum];gi|723705669|ref|XP_010322106.1|//PREDICTED: uncharacterized protein LOC101246062 isoform X2 [Solanum lycopersicum];gi|723705675|ref|XP_010322108.1|//PREDICTED: uncharacterized protein LOC101246062 isoform X4 [Solanum lycopersicum];gi|723705653|ref|XP_010322101.1|//PREDICTED: uncharacterized protein LOC101246062 isoform X1 [Solanum lycopersicum]
Solyc03g025190.4.1	2181	59.3835203285254	6.01737043018939	-3.30285754347745	0.00430428727323653	Down	0.00113078189584654	GO:0044464//cell part	GO:0015291//secondary active transmembrane transporter activity	GO:0015893//drug transport	K03327//multidrug resistance protein, MATE family	gi|350534958|ref|NP_001234424.1|//uncharacterized protein LOC543899 [Solanum lycopersicum]
Solyc09g089910.1.1	432	8.00129177586654	843.190182037053	6.71948132232842	1.17449375182271e-16	Up	3.14330741691034e-18	NA	NA	GO:0006351//transcription, DNA-templated	K14516//ethylene-responsive transcription factor 1	gi|460404916|ref|XP_004247924.1|//PREDICTED: ethylene-responsive transcription factor ERF096 [Solanum lycopersicum]
BGI_novel_G000447	6842	0.993201048152467	45.1465595113207	5.50638645402349	0.000265349667428751	Up	5.12649776463724e-05	NA	NA	NA	NA	gi|970034191|ref|XP_015078408.1|//PREDICTED: uncharacterized protein LOC107022255 [Solanum pennellii]
Solyc05g042055.1.1	857	9.30910901091781	0.647360491862808	-3.84600186556175	0.0238120348158112	Down	0.00787906042418206	GO:0044464//cell part	NA	NA	NA	gi|460389024|ref|XP_004240159.1|//PREDICTED: uncharacterized protein LOC101252690 [Solanum lycopersicum]
Solyc09g061840.3.1	1840	1748.29315455735	31843.3182813086	4.18697165997352	2.09826319104206e-22	Up	3.04243469999762e-24	NA	NA	NA	K07513//acetyl-CoA acyltransferase 1 [EC:2.3.1.16]	gi|460403245|ref|XP_004247103.1|//PREDICTED: 3-ketoacyl-CoA thiolase 2, peroxisomal [Solanum lycopersicum]
Solyc08g065330.3.1	1642	299.981314614953	97.3432640211848	-1.6237195846051	0.000262315555333876	Down	5.06190409260279e-05	NA	GO:0046872//metal ion binding	NA	K06268//serine/threonine-protein phosphatase 2B regulatory subunit	gi|356460907|ref|NP_001239045.1|//calcineurin B-like 10 [Solanum lycopersicum]
Solyc06g008520.3.1	998	597.869007407812	1358.90121799536	1.18453925582534	0.000135068625018313	Up	2.44027741711556e-05	NA	NA	NA	K08504//blocked early in transport 1	gi|460389739|ref|XP_004240507.1|//PREDICTED: bet1-like SNARE 1-1 isoform X2 [Solanum lycopersicum];gi|460389737|ref|XP_004240506.1|//PREDICTED: bet1-like SNARE 1-1 isoform X1 [Solanum lycopersicum]
Solyc06g072530.3.1	765	2.1781398510731	26.9371066837097	3.6284264063949	0.000403936386088117	Up	8.13202781147279e-05	NA	NA	NA	K11000//callose synthase [EC:2.4.1.-]	gi|460391704|ref|XP_004241459.1|//PREDICTED: CASP-like protein 1F1 [Solanum lycopersicum]
Solyc09g031820.1.1	777	34.2106030399193	7.34896028494172	-2.21883147500658	0.00542566493098978	Down	0.0014654262354076	GO:0009532//plastid stroma;GO:0009509//chromoplast	GO:0032559//adenyl ribonucleotide binding;GO:0016462//pyrophosphatase activity	NA	NA	gi|813424164|ref|YP_009132004.1|//Ycf2 (chloroplast) [Solanum habrochaites]
Solyc12g019570.2.1	1815	686.80629533319	228.792243079486	-1.58586512314472	2.98393712849753e-05	Down	4.67588776211556e-06	NA	NA	NA	K16296//serine carboxypeptidase-like clade I [EC:3.4.16.-]	gi|723749156|ref|XP_004252000.2|//PREDICTED: serine carboxypeptidase-like 7 [Solanum lycopersicum]
Solyc01g086650.3.1	2131	940.633060329316	3284.2877048583	1.80387656884101	0.000534711777745125	Up	0.000110822515072846	NA	NA	NA	NA	gi|460367465|ref|XP_004229594.1|//PREDICTED: uroporphyrinogen-III C-methyltransferase [Solanum lycopersicum]
Solyc02g085005.1.1	508	30.520617882299	418.328231445535	3.77677928890809	8.19677453771192e-16	Up	2.39535978737369e-17	NA	NA	NA	NA	gi|723672332|ref|XP_010316382.1|//PREDICTED: uncharacterized protein LOC104645740 [Solanum lycopersicum]
Solyc05g008310.3.1	2810	126.019797799496	776.619868862408	2.62355821735033	3.07081686500748e-06	Up	3.95927968393502e-07	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723697627|ref|XP_004238856.2|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 [Solanum lycopersicum]
Solyc07g007220.3.1	2265	976.043099255734	2021.18742445633	1.0501863492804	0.019001131109339	Up	0.00606622513610738	GO:0043234//protein complex	GO:0043169//cation binding;GO:0004721//phosphoprotein phosphatase activity	GO:0006464//cellular protein modification process	K14803//protein phosphatase PTC2/3 [EC:3.1.3.16]	gi|460394240|ref|XP_004242712.1|//PREDICTED: probable protein phosphatase 2C 27 [Solanum lycopersicum]
Solyc08g007790.3.1	1998	153.40332736024	518.796215797028	1.75783818069159	3.03054392890005e-05	Up	4.75569924730475e-06	NA	GO:0016747//transferase activity, transferring acyl groups other than amino-acyl groups;GO:0046912//transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer	GO:0006720//isoprenoid metabolic process	K01641//hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]	gi|698576279|ref|XP_009776168.1|//PREDICTED: hydroxymethylglutaryl-CoA synthase-like [Nicotiana sylvestris];gi|350538263|ref|NP_001234846.1|//3-hydroxy-3-methylglutaryl coenzyme A synthase [Solanum lycopersicum]
Solyc09g065620.3.1	1563	1414.14719505705	283.42984120856	-2.31886872746602	2.66825508640202e-06	Down	3.40245290389939e-07	NA	NA	NA	K08099//chlorophyllase [EC:3.1.1.14]	gi|460403437|ref|XP_004247197.1|//PREDICTED: chlorophyllase-2, chloroplastic isoform X1 [Solanum lycopersicum];gi|723730590|ref|XP_010326403.1|//PREDICTED: chlorophyllase-1 isoform X3 [Solanum lycopersicum];gi|723730587|ref|XP_010326402.1|//PREDICTED: chlorophyllase-2, chloroplastic isoform X2 [Solanum lycopersicum]
Solyc03g059490.1.1	3378	804.63503213158	1820.77604538948	1.17814702602748	0.0218839307585857	Up	0.00715053440546304	GO:0016020//membrane	GO:0000166//nucleotide binding;GO:0004672//protein kinase activity	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|525314224|ref|NP_001265974.1|//LRR receptor-like serine/threonine-protein kinase RPK2-like [Solanum lycopersicum]
Solyc03g094160.3.1	2268	423.191445087107	1875.48390626391	2.14788051468023	7.83975849110525e-06	Up	1.09466733665127e-06	NA	GO:0004175//endopeptidase activity	GO:0019538//protein metabolic process	NA	gi|460378900|ref|XP_004235205.1|//PREDICTED: metacaspase-1-like [Solanum lycopersicum]
Solyc00g090870.3.1	784	79.6883433605043	193.57224703827	1.28043151402609	0.00229444918139628	Up	0.000556079788930916	NA	NA	NA	K07199//5'-AMP-activated protein kinase, regulatory beta subunit	gi|723754539|ref|XP_004253417.2|//PREDICTED: SNF1-related protein kinase regulatory subunit beta-3 [Solanum lycopersicum]
Solyc02g092930.1.1	1086	2089.93049146547	7843.09639697163	1.90796837139836	0.000606224624921618	Up	0.000127897397385432	NA	NA	NA	K09422//myb proto-oncogene protein, plant	gi|723669374|ref|XP_010315996.1|//PREDICTED: transcription factor MYB44-like [Solanum lycopersicum]
Solyc09g065850.3.1	3690	1390.18572947134	5691.0645385787	2.03342089964295	0.0019102739267548	Up	0.000454284615055003	GO:0005634//nucleus	NA	GO:0009414//response to water deprivation;GO:0006355//regulation of transcription, DNA-templated;GO:0010600//regulation of auxin biosynthetic process;GO:0009734//auxin-activated signaling pathway;GO:0009408//response to heat;GO:0009723//response to ethylene;GO:0009791//post-embryonic development;GO:1902074//response to salt	K14484//auxin-responsive protein IAA	gi|525314467|ref|NP_001266029.1|//IAA3 protein [Solanum lycopersicum]
Solyc08g013720.3.1	1391	238.765769705305	90.0030219777012	-1.40755067374946	0.00156658528690156	Down	0.000364205056520513	NA	NA	NA	K09874//aquaporin NIP	gi|970046941|ref|XP_015084984.1|//PREDICTED: uncharacterized protein LOC107028429 [Solanum pennellii];gi|460398531|ref|XP_004244811.1|//PREDICTED: uncharacterized protein LOC101243804 [Solanum lycopersicum]
Solyc04g005200.3.1	6908	1353.45539252491	216.892621918253	-2.64159445718357	5.96550981412453e-10	Down	4.08255405499204e-11	NA	NA	NA	K14759//isochorismate synthase / 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase / 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase / O-succinylbenzoate synthase [EC:5.4.4.2 2.2.1.9 4.2.99.20 4.2.1.113]	gi|723690789|ref|XP_010319488.1|//PREDICTED: protein PHYLLO, chloroplastic isoform X2 [Solanum lycopersicum]
Solyc06g065370.3.1	834	1463.89297147857	3060.67640757463	1.06404044407249	0.0073957794335182	Up	0.00208410052300525	NA	GO:0004175//endopeptidase activity;GO:0005515//protein binding	GO:0044092//negative regulation of molecular function;GO:0019538//protein metabolic process	NA	gi|460392445|ref|XP_004241826.1|//PREDICTED: subtilisin-like protease SBT3.3 [Solanum lycopersicum]
Solyc01g079390.3.1	3581	840.499674903471	407.368570088415	-1.04491258581861	0.00106688112129133	Down	0.000238684228790464	GO:0031519//PcG protein complex	GO:0003676//nucleic acid binding	NA	K11430//histone-lysine N-methyltransferase EZH2 [EC:2.1.1.43]	gi|723658528|ref|XP_010322207.1|//PREDICTED: EZ1 protein isoform X1 [Solanum lycopersicum];gi|350536471|ref|NP_001234760.1|//EZ1 protein [Solanum lycopersicum]
Solyc08g083300.3.1	3236	489.649416125354	1592.03714648699	1.70105292885508	0.00288629444179415	Up	0.000720282588631722	NA	NA	NA	K11835//ubiquitin carboxyl-terminal hydrolase 4/11/15 [EC:3.4.19.12]	gi|460399839|ref|XP_004245444.1|//PREDICTED: ubiquitin carboxyl-terminal hydrolase 9 isoform X1 [Solanum lycopersicum]
Solyc01g007940.3.1	1826	0.369101387512931	4.35658041808085	3.56110710806237	0.0374805548970733	Up	0.0133266368407329	NA	NA	NA	K14272//glutamate--glyoxylate aminotransferase [EC:2.6.1.4 2.6.1.2 2.6.1.44]	gi|460365329|ref|XP_004228555.1|//PREDICTED: glutamate--glyoxylate aminotransferase 2-like [Solanum lycopersicum]
Solyc03g119530.3.1	2864	169.107959198825	1523.3834673006	3.17126267585256	3.60797933473594e-08	Up	3.24244750859116e-09	NA	NA	NA	NA	gi|460380138|ref|XP_004235815.1|//PREDICTED: LOB domain-containing protein 40-like [Solanum lycopersicum]
Solyc01g102770.1.1	189	129.690369453291	37.954788835695	-1.77271752181558	0.0248762733131689	Down	0.00829901880480642	GO:0031224//intrinsic component of membrane;GO:0009523//photosystem II;GO:0009534//chloroplast thylakoid	NA	GO:0042548//regulation of photosynthesis, light reaction	K02724//photosystem II PsbZ protein	gi|527209871|gb|EPS74483.1|//hypothetical protein M569_00272, partial [Genlisea aurea]
Solyc10g062330.1.1	906	245.533646561569	85.0442101478432	-1.5296358120213	9.27594262531418e-05	Down	1.60776551392988e-05	GO:0031224//intrinsic component of membrane;GO:0009941//chloroplast envelope	NA	NA	NA	gi|544163672|ref|YP_008563147.1|//hypothetical chloroplast RF1 (chloroplast) [Solanum lycopersicum]
Solyc08g082380.1.1	429	4.45139313630575	61.8573411606482	3.79661599593376	0.000507089459258692	Up	0.000104544200058142	NA	NA	NA	NA	gi|697174968|ref|XP_009596420.1|//PREDICTED: uncharacterized protein LOC104092512 [Nicotiana tomentosiformis]
Solyc03g111670.3.1	1980	986.767398841218	190.436354635057	-2.37340113421478	0.000110963407733681	Down	1.96009985556103e-05	GO:0016020//membrane	GO:0004672//protein kinase activity	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460381129|ref|XP_004236305.1|//PREDICTED: probable inactive receptor kinase At2g26730 [Solanum lycopersicum]
Solyc02g089250.3.1	3231	1593.56910566535	124.540466763936	-3.67757508692012	8.43072935016779e-07	Down	9.72921502464569e-08	NA	NA	NA	K15889//prenylcysteine alpha-carboxyl methylesterase [EC:3.1.1.-];K02184//formin 2	gi|970011322|ref|XP_015066570.1|//PREDICTED: formin-2 [Solanum pennellii];gi|460372634|ref|XP_004232133.1|//PREDICTED: formin-2 [Solanum lycopersicum]
Solyc05g025870.3.1	1255	71.3215199982582	0.605907093691171	-6.87909704356453	1.61272657738773e-07	Down	1.62907746560339e-08	NA	NA	NA	NA	gi|970025634|ref|XP_015074128.1|//PREDICTED: mast cell carboxypeptidase A isoform X1 [Solanum pennellii]
Solyc01g096630.3.1	1183	350.872884266683	74.1669065042492	-2.24210095874971	0.0125103511411654	Down	0.00376131252067393	NA	NA	NA	NA	gi|350536553|ref|NP_001234764.1|//ACI112 protein [Solanum lycopersicum]
Solyc12g044260.2.1	1138	492.764769065377	116.091469061295	-2.08563715195089	0.000274405740443255	Down	5.31566510020724e-05	NA	NA	NA	K18606//hydroxyphenylpyruvate reductase [EC:1.1.1.237];K15919//hydroxypyruvate reductase 2	gi|460413963|ref|XP_004252344.1|//PREDICTED: hydroxyphenylpyruvate reductase-like [Solanum lycopersicum]
Solyc09g098610.2.1	1600	12.0629822181546	44.5100270185114	1.88354376121592	0.0188988558641033	Up	0.00602290560243977	NA	NA	NA	K20556	gi|460404288|ref|XP_004247615.1|//PREDICTED: geraniol 8-hydroxylase-like [Solanum lycopersicum]
Solyc03g005910.3.1	1297	91.5865640519294	17.8693019822556	-2.35765268699051	0.0350030494918332	Down	0.0123126501436719	NA	NA	NA	K21026;K17604//zinc finger SWIM domain-containing protein 3;K01188//beta-glucosidase [EC:3.2.1.21];K00679//phospholipid:diacylglycerol acyltransferase [EC:2.3.1.158];K10960//geranylgeranyl reductase [EC:1.3.1.83]	gi|460376567|ref|XP_004234069.1|//PREDICTED: GDSL esterase/lipase At1g29670-like [Solanum lycopersicum]
Solyc03g118010.3.1	3563	1333.88252485864	2988.22971635165	1.16365944388434	0.00278231015024297	Up	0.000691740297529469	GO:0031332//RNAi effector complex;GO:0016442//RISC complex	GO:0016787//hydrolase activity;GO:0003712//transcription cofactor activity;GO:0005488//binding	GO:0035194//posttranscriptional gene silencing by RNA;GO:1903506//regulation of nucleic acid-templated transcription;GO:0016458//gene silencing	K15979//staphylococcal nuclease domain-containing protein 1	gi|460380233|ref|XP_004235862.1|//PREDICTED: staphylococcal nuclease domain-containing protein 1-like [Solanum lycopersicum]
Solyc04g074710.3.1	2464	49.7058072130162	212.822293017552	2.09816296102864	6.54970847813265e-05	Up	1.10105804519078e-05	NA	GO:0016763//transferase activity, transferring pentosyl groups	GO:0006400//tRNA modification	K00773//queuine tRNA-ribosyltransferase [EC:2.4.2.29]	gi|460384496|ref|XP_004237947.1|//PREDICTED: queuine tRNA-ribosyltransferase [Solanum lycopersicum];gi|970021824|ref|XP_015072186.1|//PREDICTED: queuine tRNA-ribosyltransferase-like isoform X1 [Solanum pennellii]
Solyc08g077340.2.1	2193	93.1532426384678	46.4227530360806	-1.00477390763429	0.0211641287815211	Down	0.00687747408369244	NA	NA	NA	NA	gi|723725420|ref|XP_010325540.1|//PREDICTED: uncharacterized protein LOC101259278 isoform X1 [Solanum lycopersicum];gi|970044154|ref|XP_015083484.1|//PREDICTED: F-box protein At5g03100-like [Solanum pennellii]
Solyc12g056210.2.1	1837	1793.07596918986	10428.1375787529	2.53997300279778	4.45398144843912e-20	Up	8.2511882357024e-22	GO:0016021//integral component of membrane	NA	NA	K13448//calcium-binding protein CML;K12821//pre-mRNA-processing factor 40	gi|723751967|ref|XP_010314492.1|//PREDICTED: uncharacterized protein LOC101265212 [Solanum lycopersicum]
Solyc02g079580.3.1	3105	70.1968250852338	476.081033511496	2.7617294690035	4.30731317569206e-09	Up	3.37482193801428e-10	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|723674136|ref|XP_010316641.1|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g61550 [Solanum lycopersicum]
Solyc01g109890.3.1	2520	528.995607571679	2217.04019190912	2.06730727621209	2.37282563441565e-06	Up	2.99212357284484e-07	NA	GO:0005515//protein binding	GO:0044267//cellular protein metabolic process	K09517//DnaJ homolog subfamily B member 11;K09503//DnaJ homolog subfamily A member 2	gi|460370100|ref|XP_004230892.1|//PREDICTED: chaperone protein dnaJ 10 [Solanum lycopersicum]
Solyc12g095850.2.1	1724	649.621081518576	283.518797889936	-1.19615405961548	4.48786940281203e-05	Down	7.2617567756102e-06	GO:0044424//intracellular part	GO:0032559//adenyl ribonucleotide binding;GO:0004812//aminoacyl-tRNA ligase activity	GO:0006418//tRNA aminoacylation for protein translation	K01867//tryptophanyl-tRNA synthetase [EC:6.1.1.2]	gi|460415516|ref|XP_004253104.1|//PREDICTED: tryptophan--tRNA ligase, mitochondrial [Solanum lycopersicum]
BGI_novel_G000536	749	37.9289536991225	110.28491829395	1.53986403330259	0.00320390354021163	Up	0.00081011129315901	NA	GO:0003964//RNA-directed DNA polymerase activity;GO:0008270//zinc ion binding;GO:0004519//endonuclease activity;GO:0004190//aspartic-type endopeptidase activity;GO:0003676//nucleic acid binding	GO:0015074//DNA integration;GO:0006508//proteolysis;GO:0090305//nucleic acid phosphodiester bond hydrolysis;GO:0006278//RNA-dependent DNA replication	K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6];K09422//myb proto-oncogene protein, plant;K01188//beta-glucosidase [EC:3.2.1.21];K05658//ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:3.6.3.44]	gi|130582|sp|P10978.1|POLX_TOBAC//RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Includes: RecName: Full=Protease; Includes: RecName: Full=Reverse transcriptase; Includes: RecName: Full=Endonuclease
Solyc12g014170.2.1	2959	693.630860707487	2312.93626947987	1.73748552175185	1.58696142956775e-07	Up	1.60068496660591e-08	NA	NA	NA	K11684//bromodomain-containing factor 1;K11721//bromodomain-containing protein 3	gi|460413005|ref|XP_004251886.1|//PREDICTED: transcription factor GTE3, chloroplastic-like [Solanum lycopersicum]
Solyc01g095470.3.1	4249	560.726045492526	182.875630675444	-1.61643324421398	0.00830443102950355	Down	0.00236769766455467	NA	GO:0030246//carbohydrate binding;GO:0016853//isomerase activity;GO:0003824//catalytic activity;GO:0005488//binding	GO:0044238//primary metabolic process;GO:0005975//carbohydrate metabolic process	K01792//glucose-6-phosphate 1-epimerase [EC:5.1.3.15]	gi|747045323|ref|XP_011093376.1|//PREDICTED: putative glucose-6-phosphate 1-epimerase [Sesamum indicum];gi|460368239|ref|XP_004229975.1|//PREDICTED: putative glucose-6-phosphate 1-epimerase [Solanum lycopersicum]
Solyc12g040700.1.1	1713	82.6627843796949	29.1397462082651	-1.50424964733691	0.00141255700820327	Down	0.000324654335492074	NA	NA	NA	K00695//sucrose synthase [EC:2.4.1.13]	gi|565374432|ref|XP_006353767.1|//PREDICTED: sucrose synthase-like [Solanum tuberosum]
Solyc01g007855.1.1	4131	730.594478884052	233.733399137202	-1.64420694972423	8.88165664428865e-07	Down	1.0286009838156e-07	NA	GO:0016879//ligase activity, forming carbon-nitrogen bonds;GO:0008270//zinc ion binding	GO:0006464//cellular protein modification process	K17710//pentatricopeptide repeat domain-containing protein 1;K10704//ubiquitin-conjugating enzyme E2 variant;K11000//callose synthase [EC:2.4.1.-]	gi|568215584|ref|NP_001275415.1|//ubiquitin-conjugating enzyme E2 variant 1D-like [Solanum tuberosum];gi|723655463|ref|XP_010315403.1|//PREDICTED: pentatricopeptide repeat-containing protein At4g21065-like [Solanum lycopersicum]
Solyc08g007805.1.1	507	194.876303869552	5216.62721609225	4.74248676024416	1.06952895643026e-07	Up	1.04847963150872e-08	NA	NA	NA	K03952//NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8	gi|976903651|gb|KVH91458.1|//CHCH-like protein [Cynara cardunculus var. scolymus];gi|698479774|ref|XP_009786960.1|//PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like [Nicotiana sylvestris];gi|225432428|ref|XP_002278102.1|//PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B [Vitis vinifera]
Solyc03g116700.3.1	694	1736.69784870957	51957.446071258	4.90291183753879	9.94091977664041e-15	Up	3.32006266582295e-16	NA	NA	NA	K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6];K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460380433|ref|XP_004235961.1|//PREDICTED: cucumber peeling cupredoxin-like [Solanum lycopersicum]
Solyc10g081330.2.1	1730	1066.81671005942	2240.58706385094	1.07056445945652	0.00885063129305289	Up	0.00254355029332928	NA	NA	NA	K12741//heterogeneous nuclear ribonucleoprotein A1/A3	gi|460407843|ref|XP_004249359.1|//PREDICTED: UBP1-associated protein 2A-like [Solanum lycopersicum]
Solyc03g114500.3.1	7474	382.372180332107	3157.68408572153	3.04581737397516	4.32347348837253e-25	Up	4.73796483368691e-27	GO:0044424//intracellular part;GO:0043234//protein complex	GO:0046872//metal ion binding;GO:0016836//hydro-lyase activity	GO:0006007//glucose catabolic process	K01689//enolase [EC:4.2.1.11]	gi|460380701|ref|XP_004236093.1|//PREDICTED: enolase 1, chloroplastic [Solanum lycopersicum]
Solyc09g014820.3.1	860	1.58905376886509	118.639472049077	6.22227233060484	5.13149529231247e-12	Up	2.53629147070462e-13	NA	NA	NA	NA	gi|460401617|ref|XP_004246314.1|//PREDICTED: protein LURP-one-related 10-like [Solanum lycopersicum]
Solyc02g063390.3.1	1081	213.932804209835	35.9722328961669	-2.57220210121778	0.00525696940901673	Down	0.00141378538415296	GO:0044464//cell part	NA	NA	NA	gi|970005729|ref|XP_015063705.1|//PREDICTED: uncharacterized protein C594.04c [Solanum pennellii]
Solyc06g061090.3.1	1049	832.675992087828	40.8151181936078	-4.35057968820842	3.21394547082262e-27	Down	2.92307549903355e-29	NA	NA	NA	NA	gi|460392737|ref|XP_004241970.1|//PREDICTED: uncharacterized protein LOC101244088 [Solanum lycopersicum]
Solyc06g071490.2.1	4101	1236.48884132058	598.304550411014	-1.04729727962344	0.0127850602756667	Down	0.00385248349740902	NA	NA	NA	K04728//ataxia telangiectasia mutated family protein [EC:2.7.11.1]	gi|460391767|ref|XP_004241490.1|//PREDICTED: uncharacterized protein LOC101251994 [Solanum lycopersicum]
Solyc07g038100.3.1	2666	139.647219591863	59.743304783463	-1.2249378998765	0.00506650721871472	Down	0.0013548204408476	NA	NA	NA	K12309//beta-galactosidase [EC:3.2.1.23]	gi|971549025|ref|XP_015163832.1|//PREDICTED: LOW QUALITY PROTEIN: beta-galactosidase [Solanum tuberosum];gi|460396407|ref|XP_004243765.1|//PREDICTED: uncharacterized protein LOC101246446 isoform X1 [Solanum lycopersicum];gi|723717264|ref|XP_010324070.1|//PREDICTED: uncharacterized protein LOC101246446 isoform X2 [Solanum lycopersicum]
Solyc01g102650.2.1	4079	812.549627597486	315.739907802446	-1.36371930936238	0.000278871894326561	Down	5.41465520183039e-05	NA	NA	NA	K14297//nuclear pore complex protein Nup98-Nup96	gi|971537254|ref|XP_015168642.1|//PREDICTED: nuclear pore complex protein NUP98A-like isoform X1 [Solanum tuberosum];gi|971553928|ref|XP_015165055.1|//PREDICTED: nuclear pore complex protein NUP98B-like isoform X1 [Solanum tuberosum];gi|970005159|ref|XP_015063413.1|//PREDICTED: nuclear pore complex protein NUP98A-like isoform X4 [Solanum pennellii]
Solyc03g025700.1.1	1620	26.9437506973807	69.1315260179479	1.35939307748247	0.0186480056943996	Up	0.00593750054575672	NA	NA	NA	K19090//CRISPR-associated protein Cas5t;K11000//callose synthase [EC:2.4.1.-];K13800//UMP-CMP kinase [EC:2.7.4.- 2.7.4.14]	gi|723679646|ref|XP_004234452.2|//PREDICTED: pentatricopeptide repeat-containing protein At4g25270, chloroplastic [Solanum lycopersicum]
Solyc07g008470.3.1	1054	1559.45484696298	298.374408361381	-2.38584607524555	2.60847297098169e-14	Down	9.2951400039455e-16	GO:0009536//plastid	NA	GO:0009607//response to biotic stimulus	K07253//phenylpyruvate tautomerase [EC:5.3.2.1]	gi|460394416|ref|XP_004242799.1|//PREDICTED: macrophage migration inhibitory factor homolog [Solanum lycopersicum]
Solyc09g014910.3.1	760	2.24791038744714	282.452233174539	6.97327857306686	2.11708475821907e-11	Up	1.14897696733523e-12	NA	NA	NA	NA	gi|723726914|ref|XP_010325781.1|//PREDICTED: protein LURP-one-related 10-like [Solanum lycopersicum]
Solyc00g068970.2.1	684	1485.71168482636	9764.4208901901	2.71638030744951	0.0124301130677286	Up	0.00373037728552332	NA	NA	NA	NA	gi|702283699|ref|XP_010046011.1|//PREDICTED: uncharacterized protein LOC104434852 [Eucalyptus grandis]
Solyc10g080060.1.1	801	0.42414055043184	5.9043598460129	3.79916632518608	0.0237197872071577	Up	0.00784234801429436	NA	NA	NA	NA	gi|723738430|ref|XP_004249754.2|//PREDICTED: protein MIZU-KUSSEI 1-like [Solanum lycopersicum]
Solyc06g053430.3.1	1071	636.765924666147	1393.52240333127	1.12990115655507	0.0015973323672764	Up	0.000372182966596271	NA	NA	NA	NA	gi|970031591|ref|XP_015077085.1|//PREDICTED: 15 kDa selenoprotein [Solanum pennellii]
Solyc04g072000.3.1	945	88.9509671119241	7867.15515144992	6.46668793449182	1.69306873462762e-26	Up	1.6408150849977e-28	NA	NA	NA	K01183//chitinase [EC:3.2.1.14]	gi|460384265|ref|XP_004237833.1|//PREDICTED: chitinase 6 [Solanum lycopersicum]
Solyc02g068390.3.1	768	464.178320779933	218.843756931137	-1.08477791583627	0.00400028002076168	Down	0.00104107481381236	GO:0016020//membrane	NA	NA	K09647//mitochondrial inner membrane protease subunit 1 [EC:3.4.21.-]	gi|460374946|ref|XP_004233269.1|//PREDICTED: mitochondrial inner membrane protease subunit 1 [Solanum lycopersicum]
Solyc02g084090.2.1	3117	10.369918123614	174.211983372933	4.07036745638535	3.08208770095256e-09	Up	2.34591586601503e-10	NA	NA	NA	K03544//ATP-dependent Clp protease ATP-binding subunit ClpX	gi|723672590|ref|XP_010316415.1|//PREDICTED: uncharacterized protein LOC104645754 isoform X1 [Solanum lycopersicum];gi|723672593|ref|XP_010316416.1|//PREDICTED: uncharacterized protein LOC104645754 isoform X2 [Solanum lycopersicum]
Solyc07g053740.1.1	678	4715.18625844896	25207.5476385934	2.4184691036316	7.45724045005406e-10	Up	5.20072196289367e-11	NA	NA	NA	K09286//EREBP-like factor	gi|460395602|ref|XP_004243371.1|//PREDICTED: ethylene-responsive transcription factor 4-like [Solanum lycopersicum]
Solyc11g066820.2.1	2120	3385.2018110837	452.283442428561	-2.90394275694051	3.51543086868945e-09	Down	2.70851185536793e-10	NA	GO:0016740//transferase activity	NA	K13680//beta-mannan synthase [EC:2.4.1.32]	gi|460411215|ref|XP_004251009.1|//PREDICTED: glucomannan 4-beta-mannosyltransferase 2 [Solanum lycopersicum]
Solyc03g007510.3.1	2189	89.6480539551172	26.4269807598036	-1.7622606571759	0.00268515437742932	Down	0.000664983065589697	NA	NA	NA	K14007//protein transport protein SEC24;K05658//ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:3.6.3.44];K00026//malate dehydrogenase [EC:1.1.1.37]	gi|723679195|ref|XP_010317484.1|//PREDICTED: uncharacterized protein LOC101256946 isoform X1 [Solanum lycopersicum];gi|723679207|ref|XP_010317488.1|//PREDICTED: uncharacterized protein LOC101256946 isoform X2 [Solanum lycopersicum]
Solyc03g083570.3.1	749	2005.87962717092	416.067291690139	-2.26934624909695	5.6354463298966e-16	Down	1.63215364482245e-17	NA	NA	NA	NA	gi|970019954|ref|XP_015071186.1|//PREDICTED: protein LOW PSII ACCUMULATION 2, chloroplastic [Solanum pennellii]
Solyc10g006310.3.1	772	134.385506543327	656.777442188337	2.28902702480596	4.80266423052063e-06	Up	6.39269195139002e-07	NA	NA	NA	NA	gi|460405834|ref|XP_004248379.1|//PREDICTED: UPF0136 membrane protein At2g26240-like [Solanum lycopersicum]
Solyc03g113610.3.1	5204	389.412503872687	123.794969669509	-1.65334651639613	4.64996705974372e-05	Down	7.54657692639189e-06	NA	NA	NA	K06947//polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-]	gi|460380841|ref|XP_004236162.1|//PREDICTED: polynucleotide 5'-hydroxyl-kinase NOL9 [Solanum lycopersicum]
Solyc03g123540.3.1	457	63.9730192785475	17.9909685949705	-1.83019071421262	0.0104389112112794	Down	0.00306536985695763	NA	NA	NA	K13993//HSP20 family protein	gi|460379569|ref|XP_004235534.1|//PREDICTED: 17.4 kDa class III heat shock protein [Solanum lycopersicum]
Solyc11g007400.1.1	390	116.629539695617	1054.23769471176	3.17619503943363	1.94942170759164e-08	Up	1.67417161707587e-09	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723741015|ref|XP_004249993.2|//PREDICTED: glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2-like [Solanum lycopersicum]
BGI_novel_G000007	2383	83.2987692655438	3.57800530957301	-4.54106774662509	1.28730679727359e-05	Down	1.86704590285953e-06	NA	NA	NA	K10085//ER degradation enhancer, mannosidase alpha-like 2;K18674//N-acetylgalactosamine kinase [EC:2.7.1.157]	gi|460416291|ref|XP_004253479.1|//PREDICTED: uncharacterized protein LOC101257649 [Solanum lycopersicum]
Solyc08g080030.3.1	1890	486.785801482217	240.744584047209	-1.01578374569438	0.0249164567319326	Down	0.00831834599989933	NA	GO:0016616//oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;GO:0005488//binding	GO:0008152//metabolic process	K15919//hydroxypyruvate reductase 2	gi|460400292|ref|XP_004245669.1|//PREDICTED: glyoxylate/hydroxypyruvate reductase HPR3-like [Solanum lycopersicum]
Solyc02g093350.3.1	1946	430.3813677867	182.964026734242	-1.23405559908048	0.00143694812928931	Down	0.000330742310211774	NA	NA	NA	NA	gi|460372054|ref|XP_004231849.1|//PREDICTED: uncharacterized protein LOC101263174 [Solanum lycopersicum]
Solyc07g054210.3.1	1670	8979.33721694054	1031.38968594544	-3.12201943710355	2.57655842147545e-05	Down	3.99429941662307e-06	NA	GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	GO:0008152//metabolic process	K00218//protochlorophyllide reductase [EC:1.3.1.33]	gi|845634743|ref|NP_001296970.1|//protochlorophyllide reductase [Solanum lycopersicum]
Solyc11g018777.1.1	996	242.776412863459	6251.52844002586	4.68650879097259	4.95100649536375e-10	Up	3.34397784762156e-11	NA	GO:0016209//antioxidant activity;GO:0005506//iron ion binding;GO:0003824//catalytic activity	GO:0042743//hydrogen peroxide metabolic process;GO:0006950//response to stress	K00430//peroxidase [EC:1.11.1.7]	gi|970062137|ref|XP_015057952.1|//PREDICTED: lignin-forming anionic peroxidase [Solanum pennellii]
Solyc10g005960.1.1	1248	2938.45677881951	216.176569802294	-3.76477660734374	6.83401142817729e-09	Down	5.50735526603522e-10	NA	NA	NA	K19519//transforming growth factor-beta-induced protein	gi|460405759|ref|XP_004248342.1|//PREDICTED: fasciclin-like arabinogalactan protein 1 [Solanum lycopersicum]
Solyc06g074070.3.1	4383	387.177146858154	141.746563050116	-1.44968004565919	0.00232606937779922	Down	0.000564870359190471	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K00924	gi|460391457|ref|XP_004241337.1|//PREDICTED: probable receptor protein kinase TMK1 [Solanum lycopersicum]
Solyc10g081970.2.1	417	50.6772476246325	627.493766001448	3.63019105003486	1.58221664154947e-06	Up	1.93383344551988e-07	NA	NA	NA	NA	gi|460408692|ref|XP_004249776.1|//PREDICTED: protein YLS9-like, partial [Solanum lycopersicum]
Solyc06g007150.3.1	2105	242.196760242603	106.670766449689	-1.1830147128952	0.000191891353476164	Down	3.5970687961519e-05	NA	NA	NA	K03978//GTP-binding protein	gi|460389526|ref|XP_004240403.1|//PREDICTED: GTP-binding protein 8 [Solanum lycopersicum]
Solyc02g094860.2.1	1792	0.361768159568005	5.41322881545847	3.90335202938311	0.0177163211519833	Up	0.00559396736538135	NA	GO:0016634//oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor;GO:0005506//iron ion binding	GO:0008152//metabolic process	K10717//cytokinin trans-hydroxylase	gi|525313929|ref|NP_001266167.1|//cytokinin hydroxylase-like [Solanum lycopersicum]
Solyc12g056700.2.1	1428	21.1699111642569	2.8268146103245	-2.90476603956431	0.0249704675110958	Down	0.00833776084554928	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K09841//xanthoxin dehydrogenase [EC:1.1.1.288]	gi|460414410|ref|XP_004252564.1|//PREDICTED: secoisolariciresinol dehydrogenase-like [Solanum lycopersicum]
Solyc05g005980.3.1	2347	1776.04403723043	164.981725970297	-3.42828921411888	5.057822010032e-05	Down	8.28013801552876e-06	NA	NA	NA	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|992319496|ref|NP_001307048.1|//NRT1/ PTR FAMILY 1.2 [Solanum lycopersicum]
Solyc12g049190.2.1	4041	0.382683505305684	9.274354457976	4.59902324294915	0.00264916839000496	Up	0.000654984863981769	NA	NA	NA	K10406//kinesin family member C2/C3	gi|723751177|ref|XP_004252390.2|//PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Solanum lycopersicum]
Solyc02g038670.2.1	3187	9.01538863713854	0.781113250516539	-3.52878604569359	0.0187524769322207	Down	0.00597286101781071	NA	NA	NA	K10352//myosin heavy chain;K10406//kinesin family member C2/C3	gi|970008252|ref|XP_015065007.1|//PREDICTED: tetratricopeptide repeat protein 5-like [Solanum pennellii]
Solyc03g123410.1.1	627	5076.78462625069	226.876998129514	-4.4839328032968	1.10162519262563e-30	Down	7.63762806874787e-33	GO:0030312//external encapsulating structure;GO:0005576//extracellular region	GO:0046914//transition metal ion binding;GO:0004871//signal transducer activity	GO:0009755//hormone-mediated signaling pathway	K11426//SET and MYND domain-containing protein	gi|460379586|ref|XP_004235542.1|//PREDICTED: auxin-binding protein ABP19a [Solanum lycopersicum]
Solyc01g110630.3.1	1087	6.9822360703022	0.432911863646283	-4.01154389316936	0.0147775222730618	Down	0.00454981116652343	NA	NA	NA	K14488//SAUR family protein	gi|723666124|ref|XP_004230998.2|//PREDICTED: auxin-induced protein 15A-like [Solanum lycopersicum]
BGI_novel_G000437	7049	38.441567502979	201.564546874789	2.39050283585358	0.00169772016461157	Up	0.000397788465586265	NA	GO:0016787//hydrolase activity	NA	K01181//endo-1,4-beta-xylanase [EC:3.2.1.8]	gi|723664953|ref|XP_010315176.1|//PREDICTED: endo-1,4-beta-xylanase C-like [Solanum lycopersicum]
Solyc06g075080.3.1	1876	2484.69942449793	525.32181445637	-2.24179793865737	1.47944150943428e-10	Down	9.17068447215303e-12	NA	NA	NA	K03426//NAD+ diphosphatase [EC:3.6.1.22]	gi|460391336|ref|XP_004241279.1|//PREDICTED: nudix hydrolase 19, chloroplastic [Solanum lycopersicum]
Solyc03g120560.3.1	2153	118.215332085643	373.471103163677	1.65957946090623	4.5074070090327e-08	Up	4.1213170542557e-09	NA	NA	NA	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460379870|ref|XP_004235683.1|//PREDICTED: protein NRT1/ PTR FAMILY 1.2-like [Solanum lycopersicum]
Solyc11g069290.2.1	1597	1893.68373434443	744.410593619587	-1.34702491377684	2.53171227992827e-05	Down	3.91534003631371e-06	NA	GO:0003824//catalytic activity	GO:0006541//glutamine metabolic process;GO:0009108//coenzyme biosynthetic process	K08681//5'-phosphate synthase pdxT subunit [EC:4.3.3.6]	gi|460411447|ref|XP_004251122.1|//PREDICTED: pyridoxal biosynthesis protein PDX2 [Solanum lycopersicum]
Solyc04g072240.3.1	2146	1672.63401280925	491.879365513931	-1.76574536545166	1.69736462206806e-06	Down	2.08469376387143e-07	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K14572//midasin;K00010//myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]	gi|697102062|ref|XP_009599106.1|//PREDICTED: uncharacterized oxidoreductase At4g09670-like [Nicotiana tomentosiformis];gi|460384299|ref|XP_004237850.1|//PREDICTED: uncharacterized oxidoreductase At4g09670 [Solanum lycopersicum]
Solyc01g096030.3.1	2076	182.978200153846	374.013113343108	1.03141707614525	0.0247741668957496	Up	0.00825097589136435	NA	NA	NA	NA	gi|460368267|ref|XP_004229989.1|//PREDICTED: UV-stimulated scaffold protein A homolog [Solanum lycopersicum]
Solyc01g028900.3.1	1558	1327.240669087	8153.17239748538	2.61893152198396	1.19687749553941e-20	Up	2.06558178185011e-22	NA	GO:0004738//pyruvate dehydrogenase activity	GO:0008152//metabolic process	K00167//2-oxoisovalerate dehydrogenase E1 component beta subunit [EC:1.2.4.4]	gi|460366139|ref|XP_004228950.1|//PREDICTED: 2-oxoisovalerate dehydrogenase subunit beta 2, mitochondrial-like [Solanum lycopersicum]
Solyc01g087260.3.1	2203	14300.2850621664	639.905311049584	-4.48204165532932	5.60696667944108e-39	Down	1.86007169550565e-41	NA	GO:0016702//oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen;GO:0016701//oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	GO:0055114//oxidation-reduction process	K11159//carotenoid cleavage dioxygenase	gi|350538577|ref|NP_001233838.1|//carotenoid cleavage dioxygenase 1-2 [Solanum lycopersicum];gi|723659645|ref|XP_010324092.1|//PREDICTED: carotenoid cleavage dioxygenase 1-2 isoform X1 [Solanum lycopersicum]
Solyc01g100960.3.1	3101	335.107694397234	150.262345938424	-1.15714128127965	0.000187873131221314	Down	3.51002713931255e-05	NA	GO:0005488//binding;GO:0016491//oxidoreductase activity	GO:0005975//carbohydrate metabolic process	K00036//glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]	gi|460368971|ref|XP_004230338.1|//PREDICTED: glucose-6-phosphate 1-dehydrogenase 4, chloroplastic [Solanum lycopersicum]
Solyc09g008750.1.1	609	10.4498063707558	111.080369199757	3.41005576207814	0.000183805246661094	Up	3.4256233536062e-05	NA	NA	NA	NA	gi|970051513|ref|XP_015087352.1|//PREDICTED: VQ motif-containing protein 29-like [Solanum pennellii]
Solyc01g005420.2.1	827	292.104895200848	2203.86739607121	2.91547898068037	4.49632029063828e-10	Up	3.01676476932642e-11	NA	NA	NA	NA	gi|697160095|ref|XP_009588826.1|//PREDICTED: uncharacterized protein LOC104086296 [Nicotiana tomentosiformis]
Solyc12g098640.2.1	1577	2587.17324555188	1283.70569595478	-1.01106217860013	0.0391666002832123	Down	0.0140255053577828	GO:0016021//integral component of membrane	NA	NA	K08246//cycloeucalenol cycloisomerase [EC:5.5.1.9]	gi|820375721|ref|NP_001234239.2|//cyclopropyl isomerase [Solanum lycopersicum];gi|661891851|emb|CDP04776.1|//unnamed protein product [Coffea canephora]
Solyc09g057760.3.1	828	199.43753501118	15.3441832430299	-3.70017319715812	0.000247581369440431	Down	4.74989305393581e-05	NA	NA	NA	NA	gi|971575396|ref|XP_015170701.1|//PREDICTED: uncharacterized protein LOC107063386 [Solanum tuberosum]
Solyc02g082070.3.1	1684	24.3416048003814	124.030359789305	2.34919711180194	3.22467139842024e-05	Up	5.09759631754146e-06	NA	GO:0046872//metal ion binding	NA	K07418;K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30];K15472//premnaspirodiene oxygenase [EC:1.14.13.121]	gi|460373614|ref|XP_004232610.1|//PREDICTED: premnaspirodiene oxygenase-like [Solanum lycopersicum]
Solyc11g005380.2.1	2379	1029.17725043708	4203.139730318	2.02997594630871	1.35271837812912e-08	Up	1.13751776541647e-09	NA	NA	NA	NA	gi|460408878|ref|XP_004249868.1|//PREDICTED: trihelix transcription factor GT-2-like [Solanum lycopersicum]
Solyc01g094210.2.1	1637	646.265636384616	96.6935757380955	-2.74063533560401	3.13120285209359e-06	Down	4.04063824137021e-07	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K15095//(+)-neomenthol dehydrogenase [EC:1.1.1.208]	gi|723660954|ref|XP_010326198.1|//PREDICTED: uncharacterized protein LOC101260280 isoform X2 [Solanum lycopersicum]
Solyc03g095870.2.1	972	24.1544802489259	5.71091279476027	-2.08049754947011	0.0286823514771593	Down	0.00977389507992361	GO:0043234//protein complex	GO:0008135//translation factor activity, RNA binding	GO:0006412//translation	K03237//translation initiation factor 2 subunit 1	gi|720003633|ref|XP_010257055.1|//PREDICTED: eukaryotic translation initiation factor 2 subunit alpha-like [Nelumbo nucifera];gi|565380142|ref|XP_006356471.1|//PREDICTED: eukaryotic translation initiation factor 2 subunit alpha-like [Solanum tuberosum];gi|720027388|ref|XP_010264559.1|//PREDICTED: eukaryotic translation initiation factor 2 subunit alpha-like [Nelumbo nucifera]
Solyc01g097800.3.1	1452	403.723948640744	140.281043182292	-1.52504910492058	0.000588456495138614	Down	0.000123556561693597	NA	NA	NA	NA	gi|460368531|ref|XP_004230119.1|//PREDICTED: DNA-damage-repair/toleration protein DRT102 [Solanum lycopersicum]
Solyc10g080500.2.1	1765	3854.13565265831	643.126285498466	-2.58323338973713	4.8773193879609e-11	Down	2.80516766647669e-12	GO:0043232//intracellular non-membrane-bounded organelle	GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding	NA	K10355//actin, other eukaryote	gi|565369446|ref|XP_006351346.1|//PREDICTED: actin-66 [Solanum tuberosum];gi|225449523|ref|XP_002283590.1|//PREDICTED: actin-1 [Vitis vinifera]
Solyc09g018500.2.1	1543	28.7243537694254	6.42623363346384	-2.16022909819121	0.0327080095837273	Down	0.0113944035175755	NA	NA	NA	NA	gi|723726639|ref|XP_010325739.1|//PREDICTED: transcription factor bHLH61-like isoform X3 [Solanum lycopersicum];gi|460402600|ref|XP_004246799.1|//PREDICTED: transcription factor bHLH61-like isoform X1 [Solanum lycopersicum]
Solyc06g065500.3.1	3436	1520.62513996198	380.526127868408	-1.9985971266881	2.15912006498595e-09	Down	1.61040675787867e-10	GO:0005739//mitochondrion;GO:0009507//chloroplast	GO:0004526//ribonuclease P activity	GO:0090502//RNA phosphodiester bond hydrolysis, endonucleolytic;GO:0008033//tRNA processing	K18213//proteinaceous RNase P [EC:3.1.26.5]	gi|460392420|ref|XP_004241814.1|//PREDICTED: proteinaceous RNase P 1, chloroplastic/mitochondrial [Solanum lycopersicum];gi|565374169|ref|XP_006353636.1|//PREDICTED: proteinaceous RNase P 1, chloroplastic/mitochondrial isoform X1 [Solanum tuberosum]
Solyc05g014130.3.1	4112	691.212079135175	1419.91615629317	1.03860540912646	0.000229588078730067	Up	4.36789009183787e-05	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial;K06133//4'-phosphopantetheinyl transferase [EC:2.7.8.-];K10592//E3 ubiquitin-protein ligase HUWE1 [EC:2.3.2.26]	gi|460387663|ref|XP_004239494.1|//PREDICTED: uncharacterized protein LOC101251779 [Solanum lycopersicum]
Solyc04g010060.2.1	1102	55.5509615715078	8.83842010864577	-2.65195147231696	0.000537867140153806	Down	0.000111671387008226	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial	gi|460382107|ref|XP_004236781.1|//PREDICTED: pentatricopeptide repeat-containing protein At3g04760, chloroplastic [Solanum lycopersicum]
Solyc06g062580.3.1	4083	534.424404925364	98.6942331439359	-2.43694819779578	0.000691022313977671	Down	0.000147384437176839	NA	GO:0030246//carbohydrate binding;GO:0015925//galactosidase activity;GO:0043167//ion binding	GO:0044238//primary metabolic process	K12309//beta-galactosidase [EC:3.2.1.23]	gi|971568561|ref|XP_006357461.2|//PREDICTED: beta-galactosidase-like [Solanum tuberosum];gi|460392491|ref|XP_004241849.1|//PREDICTED: beta-galactosidase-like [Solanum lycopersicum]
Solyc02g065050.1.1	1290	535.409951984269	35.2805640277589	-3.92369842501054	1.90457659987979e-14	Down	6.66616008381959e-16	NA	GO:0008233//peptidase activity	NA	K00924;K02882//large subunit ribosomal protein L18Ae;K01381//saccharopepsin [EC:3.4.23.25]	gi|460375283|ref|XP_004233436.1|//PREDICTED: aspartic proteinase PCS1-like [Solanum lycopersicum]
Solyc06g008290.3.1	961	397.144081518412	1275.50983637983	1.6833396159938	2.66889688185655e-06	Up	3.4042661136548e-07	NA	NA	GO:0006810//transport	K12192//charged multivesicular body protein 2B	gi|460389700|ref|XP_004240488.1|//PREDICTED: vacuolar protein sorting-associated protein 2 homolog 3 [Solanum lycopersicum]
Solyc02g077250.2.1	1256	64.8411010255352	17.2643750254158	-1.90911047932679	0.0456400474499494	Down	0.0167994434385064	NA	NA	NA	NA	gi|350539854|ref|NP_001233783.1|//TCP transcription factor 1 [Solanum lycopersicum]
Solyc08g080000.3.1	3060	531.570826108605	188.939128519065	-1.49234041929921	1.10172520698223e-06	Down	1.30672789943993e-07	NA	NA	NA	K13414//mitogen-activated protein kinase kinase kinase 1, plant [EC:2.7.11.25];K11324//DNA methyltransferase 1-associated protein 1	gi|460400296|ref|XP_004245671.1|//PREDICTED: uncharacterized protein LOC101252512 isoform X1 [Solanum lycopersicum];gi|723724623|ref|XP_010325439.1|//PREDICTED: uncharacterized protein LOC101252512 isoform X2 [Solanum lycopersicum]
Solyc08g083410.1.1	1566	11.5039247275691	1.19083482927199	-3.27208091304304	0.0185168158047199	Down	0.00588399637450563	NA	NA	NA	K20770;K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30];K05280//flavonoid 3'-monooxygenase [EC:1.14.13.21]	gi|723724822|ref|XP_010325459.1|//PREDICTED: flavonoid 3'-monooxygenase-like [Solanum lycopersicum]
Solyc11g013110.2.1	1647	9612.21012379149	275.791930600489	-5.12321603550789	1.44672293286509e-24	Down	1.71484230151744e-26	GO:0044424//intracellular part	GO:0016701//oxidoreductase activity, acting on single donors with incorporation of molecular oxygen;GO:0016706//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors;GO:0019842//vitamin binding;GO:0046914//transition metal ion binding	GO:0051553//flavone biosynthetic process	K05278//flavonol synthase [EC:1.14.11.23]	gi|460409806|ref|XP_004250329.1|//PREDICTED: flavonol synthase/flavanone 3-hydroxylase [Solanum lycopersicum]
Solyc01g057910.3.1	1397	29.3151135176366	149.105151235863	2.34661355179604	0.000133915960676153	Up	2.41545897462317e-05	NA	NA	NA	K09422//myb proto-oncogene protein, plant	gi|460366312|ref|XP_004229031.1|//PREDICTED: transcription factor MYB108-like [Solanum lycopersicum]
Solyc05g053790.1.1	1302	8.91231139873999	81.9994500111132	3.20174268642715	5.70545349535479e-06	Up	7.72835023189179e-07	NA	NA	NA	K08679//UDP-glucuronate 4-epimerase [EC:5.1.3.6]	gi|460388394|ref|XP_004239852.1|//PREDICTED: UDP-glucuronate 4-epimerase 6-like [Solanum lycopersicum]
Solyc01g100260.3.1	2912	1163.57358690371	458.017952103217	-1.34508640151768	0.00106047079616132	Down	0.000237091987303399	NA	NA	NA	K15442//tRNA-specific adenosine deaminase 3	gi|460368867|ref|XP_004230286.1|//PREDICTED: uncharacterized protein LOC101267938 isoform X3 [Solanum lycopersicum]
Solyc02g071490.3.1	4408	35.5340316343877	421.829946368284	3.56938822900698	6.10924138890625e-14	Up	2.29768322700403e-15	NA	NA	NA	K05278//flavonol synthase [EC:1.14.11.23];K18054//2'-deoxymugineic-acid 2'-dioxygenase / mugineic-acid 3-dioxygenase [EC:1.14.11.24 1.14.11.25]	gi|723678305|ref|XP_004233861.2|//PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101257141 [Solanum lycopersicum]
Solyc09g092020.3.1	2692	488.047490829345	8492.92462177723	4.12116800028864	3.65825949606476e-31	Up	2.44083960711045e-33	NA	NA	NA	K13448//calcium-binding protein CML	gi|970048870|ref|XP_015085938.1|//PREDICTED: receptor like protein kinase S.2 [Solanum pennellii];gi|460404788|ref|XP_004247862.1|//PREDICTED: probable calcium-binding protein CML22 isoform X1 [Solanum lycopersicum]
Solyc04g081870.3.1	2056	1191.08225521136	234.121875370078	-2.34694140277766	4.18800885101653e-08	Down	3.81678904157425e-09	GO:0044464//cell part	NA	NA	K20628	gi|970025037|ref|XP_015073830.1|//PREDICTED: expansin-A11-like [Solanum pennellii]
Solyc10g078350.2.1	3533	65.6190348943498	25.0434615263781	-1.38968038881049	0.043874411318226	Down	0.0160432374769568	NA	NA	NA	K08081//tropinone reductase I [EC:1.1.1.206];K10256//omega-6 fatty acid desaturase / acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.6 1.14.19.22]	gi|460408586|ref|XP_004249724.1|//PREDICTED: probable mediator of RNA polymerase II transcription subunit 26b [Solanum lycopersicum]
Solyc07g052203.1.1	1115	212.378707601251	3004.66218517893	3.8224917589473	2.07295813676232e-11	Up	1.12039261156455e-12	NA	NA	NA	K02184//formin 2	gi|970038445|ref|XP_015080563.1|//PREDICTED: glycine-rich cell wall structural protein 1-like isoform X1 [Solanum pennellii];gi|723715785|ref|XP_010323834.1|//PREDICTED: glycine-rich cell wall structural protein 1-like [Solanum lycopersicum]
Solyc09g092280.1.1	2541	21.5181554422554	85.3377309303862	1.98762933687617	0.00103714413697381	Up	0.000231064951047132	NA	GO:0000166//nucleotide binding	NA	K13457//disease resistance protein RPM1	gi|460404822|ref|XP_004247879.1|//PREDICTED: disease resistance protein RPP13-like [Solanum lycopersicum]
Solyc05g014340.3.1	3049	540.637103290406	2455.19534066971	2.18310538220319	9.08082643723746e-10	Up	6.40410154288552e-11	NA	NA	NA	K11584//serine/threonine-protein phosphatase 2A regulatory subunit B'	gi|460386992|ref|XP_004239176.1|//PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' theta isoform-like [Solanum lycopersicum]
Solyc01g079470.3.1	375	4118.57018522282	629.826126866698	-2.70911806346628	5.76800912135158e-10	Down	3.94094256725714e-11	NA	NA	NA	NA	gi|460367060|ref|XP_004229393.1|//PREDICTED: calvin cycle protein CP12-1, chloroplastic [Solanum lycopersicum]
Solyc09g098110.3.1	1635	276.346854577105	1093.04603806837	1.98380207046544	5.96424242245418e-06	Up	8.10557174305499e-07	NA	NA	NA	K16189//phytochrome-interacting factor 4;K11253//histone H3;K12126//phytochrome-interacting factor 3	gi|723733408|ref|XP_010326935.1|//PREDICTED: transcription factor bHLH128 isoform X2 [Solanum lycopersicum];gi|723733405|ref|XP_010326934.1|//PREDICTED: transcription factor bHLH128 isoform X1 [Solanum lycopersicum]
Solyc09g014215.1.1	937	646.288569558038	108.130396116441	-2.57940634543565	5.33822253080279e-05	Down	8.80285391243162e-06	NA	NA	NA	NA	gi|460401670|ref|XP_004246340.1|//PREDICTED: uncharacterized protein LOC101253615 [Solanum lycopersicum]
Solyc07g009470.2.1	1026	126.059527828835	17.7405355971364	-2.82898369285116	1.15084577964805e-08	Down	9.58752168448412e-10	NA	NA	NA	K10355//actin, other eukaryote	gi|723713212|ref|XP_010323367.1|//PREDICTED: uncharacterized protein LOC104648172 [Solanum lycopersicum];gi|641828009|gb|KDO47175.1|//hypothetical protein CISIN_1g017102mg [Citrus sinensis]
Solyc06g069070.1.1	285	36.5916166132414	2.60080549077944	-3.81448274312748	9.53444139343576e-05	Down	1.65754564853826e-05	NA	NA	GO:0010876//lipid localization	NA	gi|460392057|ref|XP_004241634.1|//PREDICTED: non-specific lipid-transfer protein 2-like [Solanum lycopersicum]
Solyc07g055340.3.1	1074	1277.93538469136	382.307140081618	-1.74101084246123	6.21729936473255e-09	Down	4.98718809933817e-10	NA	NA	NA	K13348//protein Mpv17	gi|460395386|ref|XP_004243264.1|//PREDICTED: protein Mpv17 [Solanum lycopersicum]
Solyc02g084410.3.1	1456	1125.71655274784	3764.97672573594	1.74179733348876	1.40844550258202e-09	Up	1.02058224877719e-10	NA	NA	NA	K14611//solute carrier family 23 (nucleobase transporter), member 1/2	gi|460373312|ref|XP_004232464.1|//PREDICTED: lactoylglutathione lyase-like [Solanum lycopersicum]
Solyc02g078380.3.1	1016	44.6020892892932	506.758993040835	3.50611658945945	3.1070501641059e-13	Up	1.28321588706923e-14	NA	NA	NA	K01953//asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4];K13783//MFS transporter, OPA family, solute carrier family 37 (glycerol-3-phosphate transporter), member 1/2	gi|460374127|ref|XP_004232863.1|//PREDICTED: stem-specific protein TSJT1-like [Solanum lycopersicum]
Solyc09g009400.3.1	2796	61.9941829474536	392.860325018902	2.66381172165166	1.28126468456702e-05	Up	1.85732755266183e-06	NA	GO:0043169//cation binding	NA	K00700//1,4-alpha-glucan branching enzyme [EC:2.4.1.18];K08232//monodehydroascorbate reductase (NADH) [EC:1.6.5.4]	gi|460402787|ref|XP_004246892.1|//PREDICTED: APO protein 3, mitochondrial [Solanum lycopersicum]
Solyc09g009780.3.1	471	175.869580442347	413.317140077897	1.23274322649532	0.000748437138680954	Up	0.000161276095822074	NA	GO:0008080//N-acetyltransferase activity	NA	K00621//glucosamine-phosphate N-acetyltransferase [EC:2.3.1.4]	gi|460402032|ref|XP_004246519.1|//PREDICTED: glucosamine 6-phosphate N-acetyltransferase [Solanum lycopersicum]
Solyc11g006580.2.1	1491	654.759180391438	264.44397143989	-1.30800229630668	0.000100954524263084	Down	1.76222617088126e-05	NA	GO:0016817//hydrolase activity, acting on acid anhydrides	NA	K08311//putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]	gi|460409033|ref|XP_004249945.1|//PREDICTED: nudix hydrolase 26, chloroplastic [Solanum lycopersicum]
Solyc08g066840.3.1	1080	1878.22616459517	502.066897938192	-1.90341927993604	8.32910250399967e-05	Down	1.42855072401027e-05	GO:0031224//intrinsic component of membrane	NA	GO:0006810//transport	K09873//aquaporin TIP	gi|726965350|ref|NP_001289841.1|//aquaporin TIP4-1 [Solanum lycopersicum]
Solyc07g053830.3.1	1727	872.09569216734	4342.47260506718	2.31595839663356	7.21055652475261e-10	Up	5.01793239589724e-11	GO:0031224//intrinsic component of membrane;GO:0019866//organelle inner membrane	NA	GO:0006810//transport	K05863//solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31	gi|460395592|ref|XP_004243366.1|//PREDICTED: ADP,ATP carrier protein 1, mitochondrial [Solanum lycopersicum]
Solyc01g111610.3.1	1514	114.182414434917	1157.28909214587	3.34133691707441	1.48314754858255e-14	Up	5.13031506293652e-16	NA	NA	NA	K19042//E3 ubiquitin-protein ligase BOI and related proteins [EC:2.3.2.27]	gi|460370409|ref|XP_004231045.1|//PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 3 [Solanum lycopersicum]
Solyc02g067480.3.1	1881	195.62500524338	78.3366667966523	-1.32033114227894	0.00453760591154698	Down	0.00119985747489616	NA	NA	NA	K07007//uncharacterized protein	gi|723676847|ref|XP_004233923.2|//PREDICTED: uncharacterized protein LOC101252847 [Solanum lycopersicum]
Solyc01g005950.3.1	2212	1827.34329775363	811.796851444893	-1.17055704475017	3.25267555468519e-05	Down	5.15336291215888e-06	GO:0044424//intracellular part	GO:0043169//cation binding;GO:0004721//phosphoprotein phosphatase activity;GO:0016791//phosphatase activity	GO:0006470//protein dephosphorylation	K04382//serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]	gi|460365504|ref|XP_004228641.1|//PREDICTED: serine/threonine-protein phosphatase PP2A catalytic subunit [Solanum lycopersicum]
Solyc03g093550.1.1	726	3461.95636191849	500.437531244467	-2.79032564332282	0.00317007890906505	Down	0.000800672979268853	NA	NA	NA	K09286//EREBP-like factor	gi|460378858|ref|XP_004235185.1|//PREDICTED: ethylene-responsive transcription factor 5-like [Solanum lycopersicum]
Solyc11g069975.1.1	2400	10.5541701279377	1.96651403325153	-2.42410075769861	0.029889387373032	Down	0.0102565118591074	NA	NA	NA	K14754//interferon-induced GTP-binding protein Mx1	gi|723745968|ref|XP_004251412.2|//PREDICTED: dynamin-related protein 4C-like [Solanum lycopersicum]
Solyc06g036170.1.1	1797	485.939453180877	2368.42564931892	2.28507990888889	3.43180471946043e-06	Up	4.45668989212768e-07	NA	NA	NA	K14777//ATP-dependent RNA helicase DDX47/RRP3 [EC:3.6.4.13];K14494//DELLA protein	gi|460390189|ref|XP_004240721.1|//PREDICTED: scarecrow-like protein 8 [Solanum lycopersicum]
Solyc10g007930.3.1	1025	213.165488718778	485.732405122464	1.18818785133638	0.0480191468381392	Up	0.017841615315438	NA	GO:0005506//iron ion binding;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K07428//cytochrome P450, family 4, subfamily X [EC:1.14.14.1]	gi|970054363|ref|XP_015088820.1|//PREDICTED: cytochrome P450 CYP72A219-like [Solanum pennellii]
Solyc04g082610.3.1	11109	519.340970108525	241.365140378633	-1.10546471502915	0.0071349544069047	Down	0.00200235096651206	GO:0031224//intrinsic component of membrane;GO:0030313//cell envelope	GO:0005231//excitatory extracellular ligand-gated ion channel activity;GO:0008066//glutamate receptor activity	GO:0006810//transport;GO:0007166//cell surface receptor signaling pathway	K05387//glutamate receptor, ionotropic, plant	gi|723696359|ref|XP_004238633.2|//PREDICTED: glutamate receptor 3.3 [Solanum lycopersicum];gi|697129153|ref|XP_009618635.1|//PREDICTED: glutamate receptor 3.3-like [Nicotiana tomentosiformis]
Solyc03g115830.2.1	1704	13.831355782382	2.4352055124984	-2.50582714496421	0.0303796752401141	Down	0.0104507985235952	NA	NA	NA	K13681//xyloglucan fucosyltransferase [EC:2.4.1.-]	gi|460381476|ref|XP_004236475.1|//PREDICTED: galactoside 2-alpha-L-fucosyltransferase [Solanum lycopersicum]
Solyc03g120850.3.1	2298	9936.59089936586	2072.4790905552	-2.26139342256939	8.6904503379547e-17	Down	2.28696061525124e-18	GO:0044424//intracellular part;GO:0005737//cytoplasm	GO:0005515//protein binding;GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding	GO:0006457//protein folding;GO:0042026//protein refolding	K04077//chaperonin GroEL	gi|823225571|ref|XP_012445589.1|//PREDICTED: ruBisCO large subunit-binding protein subunit beta, chloroplastic-like [Gossypium raimondii];gi|225442531|ref|XP_002284134.1|//PREDICTED: ruBisCO large subunit-binding protein subunit beta, chloroplastic [Vitis vinifera];gi|460379814|ref|XP_004235655.1|//PREDICTED: ruBisCO large subunit-binding protein subunit beta, chloroplastic-like [Solanum lycopersicum]
Solyc11g010780.1.1	1107	79.2305966908436	443.23401405227	2.4839390265337	7.84219891003009e-05	Up	1.33792099341016e-05	NA	GO:0016758//transferase activity, transferring hexosyl groups	NA	K18823//soyasaponin III rhamnosyltransferase [EC:2.4.1.273]	gi|460409463|ref|XP_004250158.1|//PREDICTED: UDP-glycosyltransferase 91A1-like [Solanum lycopersicum]
Solyc07g039310.1.1	1542	107.543046313608	42.1660237329635	-1.3507613571204	0.0247840603921243	Down	0.00825755363940191	NA	NA	NA	K12259//spermine oxidase [EC:1.5.3.16 1.5.3.-]	gi|460396392|ref|XP_004243758.1|//PREDICTED: probable polyamine oxidase 5 [Solanum lycopersicum]
Solyc05g006440.3.1	1007	2791.10318653199	657.423054570154	-2.08594150656384	4.52192454493905e-09	Down	3.55645623595549e-10	NA	NA	NA	NA	gi|460386078|ref|XP_004238727.1|//PREDICTED: uncharacterized protein LOC101244581 [Solanum lycopersicum]
Solyc02g023990.3.1	1591	552.449694173664	52.199696492156	-3.4037297757253	1.50603323196947e-19	Down	2.93594520769358e-21	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K08081//tropinone reductase I [EC:1.1.1.206];K00059//3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100];K09841//xanthoxin dehydrogenase [EC:1.1.1.288]	gi|460371478|ref|XP_004231563.1|//PREDICTED: uncharacterized oxidoreductase C24B10.20 [Solanum lycopersicum]
Solyc07g064830.3.1	4037	709.697962838729	159.665547978197	-2.15215211803787	0.000144740841108113	Down	2.6301312077011e-05	NA	GO:0043167//ion binding;GO:0016798//hydrolase activity, acting on glycosyl bonds	GO:0044238//primary metabolic process	K00700//1,4-alpha-glucan branching enzyme [EC:2.4.1.18]	gi|460397086|ref|XP_004244099.1|//PREDICTED: 1,4-alpha-glucan-branching enzyme 3, chloroplastic/amyloplastic [Solanum lycopersicum]
Solyc04g056320.2.1	1528	316.495706275367	891.126010923416	1.49344352495856	0.00508110551219339	Up	0.00135891352504799	NA	GO:0046872//metal ion binding;GO:0003676//nucleic acid binding	NA	K14794//ribosomal RNA-processing protein 12;K14412//alpha-1,4-fucosyltransferase [EC:2.4.1.65];K12309//beta-galactosidase [EC:3.2.1.23]	gi|525314158|ref|NP_001265961.1|//Hop-interacting protein THI038 [Solanum lycopersicum]
Solyc04g078000.3.1	3404	486.237391782692	225.675500755512	-1.10741103264043	0.000234161874952016	Down	4.46363436896009e-05	NA	NA	NA	NA	gi|460384803|ref|XP_004238098.1|//PREDICTED: protein SNOWY COTYLEDON 3 [Solanum lycopersicum]
Solyc09g082720.3.1	1591	386.025894905645	185.541407689055	-1.0569564355583	0.0325361236477485	Down	0.0113282870450157	NA	GO:0004033//aldo-keto reductase (NADP) activity	GO:0008152//metabolic process	K05275//pyridoxine 4-dehydrogenase [EC:1.1.1.65];K17744//L-galactose dehydrogenase [EC:1.1.1.316]	gi|970050012|ref|XP_015086525.1|//PREDICTED: perakine reductase-like [Solanum pennellii]
Solyc06g008360.3.1	1854	30.2869754940305	74.7447919320977	1.3032755432174	0.00968659814952308	Up	0.00282098521478395	NA	NA	NA	K12581//CCR4-NOT transcription complex subunit 7/8;K13126//polyadenylate-binding protein;K05941//glutathione gamma-glutamylcysteinyltransferase [EC:2.3.2.15];K01054//acylglycerol lipase [EC:3.1.1.23]	gi|460389718|ref|XP_004240497.1|//PREDICTED: protein CUP-SHAPED COTYLEDON 3-like [Solanum lycopersicum]
Solyc08g014110.1.1	543	1.12446108799304	8.87900914359903	2.98116494997861	0.038351439848811	Up	0.013664880479901	NA	NA	NA	NA	gi|747061325|ref|XP_011077126.1|//PREDICTED: uncharacterized protein LOC105161205 [Sesamum indicum]
Solyc12g062690.2.1	485	22.3126844699119	1.12185401826148	-4.31390723470144	0.000148150330690344	Down	2.70092167663065e-05	NA	NA	NA	NA	gi|971581851|ref|XP_015159589.1|//PREDICTED: uncharacterized protein LOC107058417 [Solanum tuberosum]
Solyc02g094590.3.1	3316	920.178650231816	199.975944022288	-2.20208752139463	3.38695282294173e-07	Down	3.6308619050173e-08	GO:0009536//plastid	GO:0003677//DNA binding;GO:0032559//adenyl ribonucleotide binding;GO:0001071//nucleic acid binding transcription factor activity;GO:0042623//ATPase activity, coupled	GO:0006351//transcription, DNA-templated;GO:0006259//DNA metabolic process	K03655//ATP-dependent DNA helicase RecG [EC:3.6.4.12]	gi|723668739|ref|XP_010315893.1|//PREDICTED: ATP-dependent RNA helicase ROK1 isoform X2 [Solanum lycopersicum];gi|460371835|ref|XP_004231740.1|//PREDICTED: uncharacterized protein LOC101256820 isoform X1 [Solanum lycopersicum]
Solyc01g099980.3.1	3499	94.7493228353689	21.6635457013697	-2.12884624242249	0.00432654095106252	Down	0.00113727325133789	NA	NA	NA	NA	gi|723662980|ref|XP_010313233.1|//PREDICTED: uncharacterized protein LOC101261459 isoform X1 [Solanum lycopersicum];gi|460368823|ref|XP_004230264.1|//PREDICTED: uncharacterized protein LOC101261459 isoform X2 [Solanum lycopersicum]
Solyc03g119480.3.1	708	70.9840513188215	219.221805070483	1.62682448250898	8.03386657047779e-05	Up	1.37241726899134e-05	NA	NA	NA	NA	gi|565349248|ref|XP_006341607.1|//PREDICTED: uncharacterized protein LOC102594284 [Solanum tuberosum]
Solyc06g060910.2.1	2450	37.6375570027618	13.5177359008246	-1.47731945452814	0.0370400010551921	Down	0.0131423799777983	NA	NA	NA	K13783//MFS transporter, OPA family, solute carrier family 37 (glycerol-3-phosphate transporter), member 1/2	gi|460393364|ref|XP_004242279.1|//PREDICTED: putative glycerol-3-phosphate transporter 4 [Solanum lycopersicum]
Solyc07g062520.3.1	1985	819.064922149414	132.288787715444	-2.63028702024176	2.76770307479567e-12	Down	1.31328686976848e-13	NA	GO:0005506//iron ion binding;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K07428//cytochrome P450, family 4, subfamily X [EC:1.14.14.1];K07426//cytochrome P450, family 4, subfamily B, polypeptide 1 [EC:1.14.14.1]	gi|460397436|ref|XP_004244273.1|//PREDICTED: cytochrome P450 CYP72A219-like [Solanum lycopersicum]
Solyc05g054420.3.1	4084	202.445400811015	97.9377344287847	-1.04759613998496	0.0162173468684011	Down	0.00505175069998613	NA	NA	NA	K14844//pumilio homology domain family member 6	gi|460388278|ref|XP_004239795.1|//PREDICTED: protein INVOLVED IN DE NOVO 2-like [Solanum lycopersicum]
Solyc02g090310.1.1	783	56.0133831178285	236.467231282771	2.07779680182043	4.44367825343438e-05	Up	7.18528263880957e-06	NA	NA	NA	K16222//Dof zinc finger protein DOF5.5	gi|460372489|ref|XP_004232062.1|//PREDICTED: dof zinc finger protein DOF1.7-like [Solanum lycopersicum]
Solyc03g113030.3.1	1610	184.12923655393	37.9190100758701	-2.27972551357429	0.00148525317792053	Down	0.000343521543499213	NA	GO:0016857//racemase and epimerase activity, acting on carbohydrates and derivatives;GO:0005488//binding	GO:0005996//monosaccharide metabolic process	K01785//aldose 1-epimerase [EC:5.1.3.3]	gi|460380921|ref|XP_004236201.1|//PREDICTED: aldose 1-epimerase [Solanum lycopersicum]
Solyc11g011120.2.1	2482	285.436794103238	646.738118446216	1.1800103279069	0.00656275112245065	Up	0.00181852884465104	NA	NA	NA	K13806//sn1-specific diacylglycerol lipase [EC:3.1.1.-]	gi|460409502|ref|XP_004250177.1|//PREDICTED: uncharacterized protein LOC101256054 [Solanum lycopersicum]
Solyc06g067950.3.1	2214	292.703771863521	124.672446409055	-1.23129868339403	0.00139788976783552	Down	0.000320814346971944	NA	GO:0016787//hydrolase activity;GO:0003824//catalytic activity	NA	K06130//lysophospholipase II [EC:3.1.1.5]	gi|697149580|ref|XP_009629002.1|//PREDICTED: acyl-protein thioesterase 1 homolog 1 [Nicotiana tomentosiformis];gi|723709213|ref|XP_010322678.1|//PREDICTED: acyl-protein thioesterase 2-like isoform X1 [Solanum lycopersicum]
BGI_novel_G000339	708	2.62626201932015	15.734665107052	2.58286370833044	0.0316627673573942	Up	0.0109736249772272	NA	NA	NA	K11786//ATP-dependent helicase STH1/SNF2 [EC:3.6.4.-]	gi|548862241|gb|ERN19605.1|//hypothetical protein AMTR_s00062p00128410 [Amborella trichopoda]
Solyc01g107160.3.1	1312	282.81579026286	650.23432692716	1.2010970488421	1.54946580248124e-05	Up	2.29116253110299e-06	NA	NA	NA	K02180//cell cycle arrest protein BUB3	gi|460369714|ref|XP_004230702.1|//PREDICTED: mitotic checkpoint protein BUB3.1 [Solanum lycopersicum]
Solyc03g083910.4.1	2316	3117.80248574273	948.499210676166	-1.71681105735434	0.00517479596502069	Down	0.00138647806010768	GO:0043231//intracellular membrane-bounded organelle;GO:0031224//intrinsic component of membrane	GO:0004558//alpha-1,4-glucosidase activity	GO:0044238//primary metabolic process	K01193//beta-fructofuranosidase [EC:3.2.1.26]	gi|915409033|ref|NP_001234843.2|//acid invertase [Solanum lycopersicum]
Solyc08g068690.1.1	723	1014.97552902131	8270.28856727399	3.02649272428597	0.00015500182178424	Up	2.84768482666645e-05	NA	GO:0016407//acetyltransferase activity	NA	NA	gi|460399512|ref|XP_004245283.1|//PREDICTED: tyramine N-feruloyltransferase 4/11-like [Solanum lycopersicum]
Solyc10g018530.2.1	2430	691.658040099086	38.4589336105159	-4.16866827172006	4.1947431436867e-20	Down	7.72403128440894e-22	NA	NA	NA	K08741//DNA mismatch repair protein MSH5	gi|225460933|ref|XP_002279440.1|//PREDICTED: DNA mismatch repair protein MSH5 isoform X5 [Vitis vinifera];gi|460406197|ref|XP_004248554.1|//PREDICTED: DNA mismatch repair protein MSH5 isoform X2 [Solanum lycopersicum];gi|723735578|ref|XP_010327311.1|//PREDICTED: DNA mismatch repair protein MSH5 isoform X6 [Solanum lycopersicum];gi|723735569|ref|XP_010327308.1|//PREDICTED: DNA mismatch repair protein MSH5 isoform X3 [Solanum lycopersicum]
Solyc10g074950.2.1	1258	77.4335246206905	15.9615709459573	-2.27835566293855	0.0143234242372605	Down	0.00438704252861075	NA	NA	NA	NA	gi|460407192|ref|XP_004249038.1|//PREDICTED: uncharacterized protein LOC101263359 [Solanum lycopersicum]
Solyc03g005820.3.1	1487	203.032494695369	35.305317760663	-2.52375323785914	3.87356571172639e-07	Down	4.19652494286279e-08	NA	NA	NA	NA	gi|460376540|ref|XP_004234056.1|//PREDICTED: probable purine permease 9 isoform X2 [Solanum lycopersicum]
Solyc04g077230.1.1	225	263.381005065336	1080.73901632186	2.03679496616947	4.78665033433945e-06	Up	6.36602370393736e-07	NA	NA	NA	NA	gi|698569150|ref|XP_009774254.1|//PREDICTED: uncharacterized protein LOC104224332 [Nicotiana sylvestris]
Solyc01g056690.3.1	2007	832.070846110284	245.806743980154	-1.75918187270187	2.47027456098684e-06	Down	3.12881801037472e-07	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004702//receptor signaling protein serine/threonine kinase activity;GO:0016791//phosphatase activity	GO:0006464//cellular protein modification process	K19704//protein phosphatase PTC1 [EC:3.1.3.16];K17506//protein phosphatase 1L [EC:3.1.3.16]	gi|723657381|ref|XP_010319615.1|//PREDICTED: protein kinase and PP2C-like domain-containing protein isoform X2 [Solanum lycopersicum];gi|460366371|ref|XP_004229056.1|//PREDICTED: protein kinase and PP2C-like domain-containing protein isoform X1 [Solanum lycopersicum]
Solyc02g064800.3.1	5409	548.831661736387	238.197351684469	-1.20420633885501	0.0218271253596904	Down	0.00712790537036855	NA	NA	NA	K14963//COMPASS component SWD3;K10752//histone-binding protein RBBP4	gi|460375305|ref|XP_004233447.1|//PREDICTED: uncharacterized protein LOC101268835 isoform X1 [Solanum lycopersicum];gi|723677341|ref|XP_010317167.1|//PREDICTED: uncharacterized protein LOC101268835 isoform X2 [Solanum lycopersicum]
Solyc04g081900.3.1	1941	744.157786452115	3264.0197837721	2.13296934305307	2.24967000398021e-06	Up	2.82173086454205e-07	NA	GO:0043169//cation binding;GO:0003824//catalytic activity	GO:0019725//cellular homeostasis;GO:0007165//signal transduction	K17609//nucleoredoxin [EC:1.8.1.8]	gi|460385385|ref|XP_004238384.1|//PREDICTED: probable nucleoredoxin 2 [Solanum lycopersicum]
Solyc09g010510.3.1	1332	31.166655351409	183.704566693145	2.55931224509237	1.93046026308696e-06	Up	2.3932871757221e-07	NA	GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	GO:0008152//metabolic process	K11153//retinol dehydrogenase 12 [EC:1.1.1.300]	gi|697140349|ref|XP_009624274.1|//PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like isoform X1 [Nicotiana tomentosiformis];gi|460401877|ref|XP_004246442.1|//PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Solanum lycopersicum]
Solyc04g009600.3.1	2560	125.232217630343	356.820787810295	1.5105939045798	0.00115371865683101	Up	0.000260046843516369	NA	NA	NA	K12501//homogentisate solanesyltransferase [EC:2.5.1.117]	gi|723689639|ref|XP_010319293.1|//PREDICTED: uncharacterized protein LOC101248379 isoform X2 [Solanum lycopersicum]
Solyc04g007230.3.1	2616	374.182678970733	1257.60493525079	1.74886410187719	5.33112837754361e-08	Up	4.94601853723947e-09	NA	NA	NA	K19476//vacuolar protein sorting-associated protein IST1	gi|460382510|ref|XP_004236982.1|//PREDICTED: IST1 homolog [Solanum lycopersicum]
Solyc08g076000.3.1	1359	113.944142997319	277.743112503173	1.28542436746804	0.00174448153776521	Up	0.000410500668999245	NA	GO:0032559//adenyl ribonucleotide binding	GO:0012501//programmed cell death;GO:0006950//response to stress	K19613//leucine-rich repeat protein SHOC2;K15078//structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]	gi|970044359|ref|XP_015083592.1|//PREDICTED: putative disease resistance protein RGA4 [Solanum pennellii];gi|460400806|ref|XP_004245923.1|//PREDICTED: putative disease resistance protein RGA4 [Solanum lycopersicum]
Solyc04g081890.1.1	405	65.3833937602578	16.1744861615366	-2.01520438216076	0.000220054434060512	Down	4.17667056148847e-05	NA	GO:0046914//transition metal ion binding	NA	K19037//E3 ubiquitin-protein ligase ATL23 [EC:2.3.2.27]	gi|460385383|ref|XP_004238383.1|//PREDICTED: E3 ubiquitin-protein ligase ATL23 [Solanum lycopersicum]
Solyc01g008950.3.1	556	999.35102414199	2453.76034869335	1.29593093043976	5.79280573352549e-05	Up	9.62156789495661e-06	NA	GO:0046872//metal ion binding	NA	K02183//calmodulin	gi|568214802|ref|NP_001275359.1|//calmodulin-5/6/7/8 [Solanum tuberosum]
Solyc02g071610.3.1	1498	708.283901271137	3558.68064069018	2.32894281339822	0.000124591435408962	Up	2.22869501463996e-05	NA	GO:0016787//hydrolase activity	GO:0044238//primary metabolic process	K21026;K17604//zinc finger SWIM domain-containing protein 3;K01188//beta-glucosidase [EC:3.2.1.21];K00679//phospholipid:diacylglycerol acyltransferase [EC:2.3.1.158];K10960//geranylgeranyl reductase [EC:1.3.1.83]	gi|460374383|ref|XP_004232990.1|//PREDICTED: GDSL esterase/lipase At5g45670 [Solanum lycopersicum]
Solyc11g030600.3.1	5217	1768.63694321996	751.218542767943	-1.23533334990132	0.00127498193153298	Down	0.000289803183930526	GO:0043231//intracellular membrane-bounded organelle	GO:0008757//S-adenosylmethionine-dependent methyltransferase activity;GO:0003676//nucleic acid binding	GO:0032776//DNA methylation on cytosine	K00558//DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	gi|952977787|ref|NP_001234748.2|//DNA (cytosine-5)-methyltransferase [Solanum lycopersicum]
Solyc07g043600.3.1	1504	2147.08357522494	518.343176297316	-2.05039887355629	5.35662377632869e-07	Down	5.93405615895664e-08	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial;K17710//pentatricopeptide repeat domain-containing protein 1	gi|565383162|ref|XP_006357891.1|//PREDICTED: pentatricopeptide repeat-containing protein At3g59040 isoform X1 [Solanum tuberosum];gi|460396125|ref|XP_004243629.1|//PREDICTED: pentatricopeptide repeat-containing protein At3g59040 [Solanum lycopersicum]
Solyc09g011660.3.1	1487	1126.29239905167	4961.59572580623	2.13922277121937	4.69648145834956e-10	Up	3.15981401234567e-11	NA	NA	GO:0006950//response to stress	K17609//nucleoredoxin [EC:1.8.1.8];K00799//glutathione S-transferase [EC:2.5.1.18]	gi|460401744|ref|XP_004246377.1|//PREDICTED: universal stress protein A-like protein [Solanum lycopersicum]
Solyc01g010020.3.1	486	36.2175429692116	435.558274158648	3.58810517162636	2.78061539424776e-22	Up	4.09401774537e-24	NA	NA	NA	K13448//calcium-binding protein CML	gi|460365065|ref|XP_004228426.1|//PREDICTED: probable calcium-binding protein CML15 [Solanum lycopersicum]
Solyc12g096250.2.1	991	48.0335559198295	125.45903645303	1.38510186743216	0.0174211520932802	Up	0.00548453297226198	NA	NA	NA	K19747//BAHD acyltransferase [EC:2.3.1.-]	gi|723753520|ref|XP_004253191.2|//PREDICTED: uncharacterized acetyltransferase At3g50280-like isoform X1 [Solanum lycopersicum]
Solyc02g080080.3.1	1919	591.13451942029	1717.43605843971	1.53869801268634	0.0310260152144051	Up	0.0107136202827736	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|723674025|ref|XP_010316618.1|//PREDICTED: putative receptor-like protein kinase At4g00960 [Solanum lycopersicum]
Solyc10g075020.2.1	1134	4091.00134798366	973.006320798143	-2.0719329304761	2.81688735403185e-05	Down	4.39416787558644e-06	NA	NA	NA	K02356//elongation factor P	gi|460407194|ref|XP_004249039.1|//PREDICTED: uncharacterized protein LOC101263649 [Solanum lycopersicum]
Solyc01g066200.1.1	270	11.2479341732994	140.639800329738	3.64427296583791	0.000111437103526099	Up	1.96888277439134e-05	NA	NA	NA	NA	NA
Solyc08g061630.3.1	2363	4595.43206388597	973.388768753193	-2.23911247692299	7.20015325657523e-12	Down	3.62584130372489e-13	GO:0044464//cell part	NA	NA	K02221//YggT family protein	gi|460399027|ref|XP_004245046.1|//PREDICTED: uncharacterized protein LOC101267629 [Solanum lycopersicum]
Solyc05g043390.2.1	3594	388.70224285769	140.251498437914	-1.47064924764464	0.00103761395947631	Down	0.00023120829915571	NA	NA	NA	K02886//large subunit ribosomal protein L2;K00670//peptide alpha-N-acetyltransferase [EC:2.3.1.88]	gi|698477662|ref|XP_009786038.1|//PREDICTED: uncharacterized protein LOC104234204 [Nicotiana sylvestris]
Solyc04g049380.3.1	3205	2758.42937302259	500.589374414685	-2.46214746849864	1.25697092711768e-06	Down	1.50632232394638e-07	NA	GO:0032559//adenyl ribonucleotide binding;GO:0016301//kinase activity	GO:0006464//cellular protein modification process	K08869//aarF domain-containing kinase	gi|460383672|ref|XP_004237543.1|//PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic [Solanum lycopersicum]
Solyc09g014380.3.1	2438	927.427054176154	372.23809905999	-1.31700808780392	0.000481834885533701	Down	9.88167414718363e-05	GO:0031224//intrinsic component of membrane	NA	NA	K13946//auxin influx carrier (AUX1 LAX family)	gi|350539531|ref|NP_001233919.1|//LAX1 protein [Solanum lycopersicum];gi|970052922|ref|XP_015088085.1|//PREDICTED: auxin transporter-like protein 2 [Solanum pennellii]
Solyc01g111075.1.1	365	4204.36127305569	225.212773311728	-4.22252608310016	2.4736579766585e-10	Down	1.58775869830249e-11	GO:0030312//external encapsulating structure	NA	GO:0006950//response to stress	K03860//phosphatidylinositol glycan, class Q;K20887	gi|995970146|ref|NP_001307142.1|//snakin-2 precursor [Solanum lycopersicum]
Solyc05g015860.3.1	2055	428.453062669699	1523.89433286314	1.83055379967342	8.16974803304526e-05	Up	1.39806594676125e-05	GO:0016020//membrane;GO:0005783//endoplasmic reticulum	GO:0016831//carboxy-lyase activity;GO:0016832//aldehyde-lyase activity;GO:0048037//cofactor binding;GO:0030170//pyridoxal phosphate binding	GO:0019752//carboxylic acid metabolic process;GO:0043436//oxoacid metabolic process;GO:0030149//sphingolipid catabolic process	K01634//sphinganine-1-phosphate aldolase [EC:4.1.2.27]	gi|698520406|ref|XP_009805074.1|//PREDICTED: sphingosine-1-phosphate lyase isoform X1 [Nicotiana sylvestris];gi|460387128|ref|XP_004239241.1|//PREDICTED: sphingosine-1-phosphate lyase [Solanum lycopersicum]
Solyc10g049630.2.1	1782	658.945563230788	6199.83612158049	3.23399889023849	5.51339293741097e-08	Up	5.12950230049866e-09	GO:0043234//protein complex	GO:0043169//cation binding;GO:0004721//phosphoprotein phosphatase activity	GO:0006464//cellular protein modification process	K01102//pyruvate dehydrogenase phosphatase [EC:3.1.3.43]	gi|460406637|ref|XP_004248768.1|//PREDICTED: probable protein phosphatase 2C 63 [Solanum lycopersicum];gi|970054820|ref|XP_015089053.1|//PREDICTED: probable protein phosphatase 2C 63 [Solanum pennellii]
Solyc08g083370.3.1	2615	1234.99603934572	88.9530614660486	-3.79531834577167	1.84895267020718e-12	Down	8.57349456440187e-14	GO:0044424//intracellular part;GO:0005737//cytoplasm	GO:0000287//magnesium ion binding;GO:0046872//metal ion binding;GO:0016462//pyrophosphatase activity;GO:0004427//inorganic diphosphatase activity	GO:0006793//phosphorus metabolic process;GO:0006796//phosphate-containing compound metabolic process	K01507//inorganic pyrophosphatase [EC:3.6.1.1]	gi|460399829|ref|XP_004245439.1|//PREDICTED: soluble inorganic pyrophosphatase-like isoform X2 [Solanum lycopersicum]
Solyc10g045420.2.1	2765	673.35092813936	4395.03582411106	2.70644443419775	1.48085224360427e-17	Up	3.58235092477699e-19	NA	NA	NA	K13506//glycerol-3-phosphate O-acyltransferase 3/4 [EC:2.3.1.15]	gi|460406749|ref|XP_004248822.1|//PREDICTED: uncharacterized protein At1g04910-like isoform X1 [Solanum lycopersicum];gi|723736922|ref|XP_010327510.1|//PREDICTED: uncharacterized protein At1g04910-like isoform X2 [Solanum lycopersicum]
Solyc07g066260.3.1	2625	936.579363410845	8425.72717744469	3.16932804745937	4.53571696733137e-18	Up	1.02285252916188e-19	NA	NA	NA	K10147//protein phosphatase 1D [EC:3.1.3.16];K19704//protein phosphatase PTC1 [EC:3.1.3.16];K17506//protein phosphatase 1L [EC:3.1.3.16];K19477//cGMP-dependent protein kinase 2 [EC:2.7.11.12]	gi|460396880|ref|XP_004243998.1|//PREDICTED: probable protein phosphatase 2C 6 [Solanum lycopersicum]
Solyc09g007200.3.1	3196	2419.65415570602	277.570082179643	-3.12387687507709	8.97010241301906e-12	Down	4.58402057859294e-13	NA	NA	NA	K17710//pentatricopeptide repeat domain-containing protein 1	gi|460402414|ref|XP_004246707.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g02830, chloroplastic [Solanum lycopersicum]
Solyc05g007160.3.1	4183	601.008452361211	281.095478384343	-1.09632503345517	0.00738252910050768	Down	0.00207981045704626	NA	NA	NA	K09422//myb proto-oncogene protein, plant	gi|460386181|ref|XP_004238778.1|//PREDICTED: myb-related protein A isoform X2 [Solanum lycopersicum];gi|723697359|ref|XP_010320670.1|//PREDICTED: myb-related protein A isoform X1 [Solanum lycopersicum]
Solyc01g099150.4.1	3224	280.322578150485	12.6608667840349	-4.46863986613494	5.01183153467066e-19	Down	1.02373776688517e-20	GO:0005737//cytoplasm	GO:0016702//oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen;GO:0046872//metal ion binding;GO:0046914//transition metal ion binding;GO:0051213//dioxygenase activity	GO:0046394//carboxylic acid biosynthetic process;GO:0006631//fatty acid metabolic process;GO:0006633//fatty acid biosynthetic process;GO:0055114//oxidation-reduction process;GO:0031408//oxylipin biosynthetic process	K15718//linoleate 9S-lipoxygenase [EC:1.13.11.58];K01206//alpha-L-fucosidase [EC:3.2.1.51]	gi|478246969|gb|ABF19102.2|//9-lipoxygenase [Capsicum annuum];gi|460368710|ref|XP_004230208.1|//PREDICTED: desiccation-related protein PCC13-62-like [Solanum lycopersicum];gi|970002949|ref|XP_015062237.1|//PREDICTED: probable linoleate 9S-lipoxygenase 5 [Solanum pennellii];gi|568214908|ref|NP_001274916.1|//probable linoleate 9S-lipoxygenase 5 [Solanum tuberosum]
BGI_novel_G000101	2446	105.898265841276	35.3052888192922	-1.58472274030414	7.80052239918369e-05	Down	1.32964771624672e-05	NA	NA	NA	K07447//putative holliday junction resolvase [EC:3.1.-.-]	gi|460367854|ref|XP_004229785.1|//PREDICTED: uncharacterized protein LOC101244120 [Solanum lycopersicum]
Solyc02g083140.3.1	3271	1643.08072967902	248.045880833877	-2.72772446166249	4.07241993476548e-16	Down	1.15669598564608e-17	NA	NA	NA	NA	gi|832626201|ref|NP_001234480.2|//ribonuclease E [Solanum lycopersicum]
Solyc02g093250.3.1	1574	460.696717638934	1648.65350989883	1.83939900168553	0.000896317279924213	Up	0.000197217865789199	NA	GO:0043169//cation binding;GO:0008171//O-methyltransferase activity	GO:0009699//phenylpropanoid biosynthetic process;GO:0006730//one-carbon metabolic process	K00588//caffeoyl-CoA O-methyltransferase [EC:2.1.1.104]	gi|460372069|ref|XP_004231856.1|//PREDICTED: caffeoyl-CoA O-methyltransferase [Solanum lycopersicum]
Solyc12g019110.2.1	2963	1843.94640118094	484.419489764077	-1.92846790530747	7.28304952885202e-13	Down	3.1842603145366e-14	NA	NA	NA	K01873//valyl-tRNA synthetase [EC:6.1.1.9]	gi|723749089|ref|XP_010313997.1|//PREDICTED: valine--tRNA ligase, mitochondrial [Solanum lycopersicum];gi|971560455|ref|XP_015166696.1|//PREDICTED: valine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X2 [Solanum tuberosum]
Solyc04g010120.3.1	1711	677.435031062425	1449.38547370292	1.09728684272026	5.33280555620767e-05	Up	8.78994564244458e-06	NA	NA	NA	K18624//macrophage erythroblast attacher	gi|856116678|ref|NP_001297055.1|//macrophage erythroblast attacher [Solanum lycopersicum]
Solyc09g075450.3.1	2157	1115.94622183085	2790.76701693383	1.32239418372808	1.15128907800173e-05	Up	1.65217792988917e-06	GO:0044424//intracellular part;GO:0043234//protein complex	GO:0016836//hydro-lyase activity	GO:0043648//dicarboxylic acid metabolic process;GO:0009060//aerobic respiration	K01679//fumarate hydratase, class II [EC:4.2.1.2]	gi|970053884|ref|XP_015088571.1|//PREDICTED: fumarate hydratase 1, mitochondrial [Solanum pennellii]
Solyc04g026220.3.1	904	24.9267548367477	0.654787106408704	-5.2505253497205	0.000477490893812245	Down	9.7836866083417e-05	NA	NA	NA	K16287//ubiquitin-like-specific protease 1C/D [EC:3.4.22.68]	gi|970025818|ref|XP_015074216.1|//PREDICTED: ubiquitin-like-specific protease 1D isoform X3 [Solanum pennellii]
Solyc09g009130.3.1	553	739.269563648249	2879.90334482737	1.96184797012048	0.000552760707157673	Up	0.000115269180150825	NA	NA	NA	NA	gi|350539829|ref|NP_001234797.1|//putative phytosulfokine peptide precursor [Solanum lycopersicum]
Solyc06g008690.1.1	1831	508.446543344924	233.41174628289	-1.12321893562172	6.80887633678258e-06	Down	9.37273755469587e-07	NA	NA	NA	K10454//kelch-like protein 17 (actinfilin);K10457//kelch-like protein 20	gi|697111894|ref|XP_009609821.1|//PREDICTED: F-box/kelch-repeat protein SKIP30-like [Nicotiana tomentosiformis];gi|460389757|ref|XP_004240515.1|//PREDICTED: F-box/kelch-repeat protein SKIP30-like [Solanum lycopersicum]
Solyc04g049910.3.1	1471	189.086691935949	387.705373275091	1.03591290088989	8.65388804513061e-05	Up	1.49123767827042e-05	GO:0043231//intracellular membrane-bounded organelle;GO:0005634//nucleus	GO:0003677//DNA binding;GO:0046982//protein heterodimerization activity;GO:0043565//sequence-specific DNA binding	GO:0006355//regulation of transcription, DNA-templated;GO:0006351//transcription, DNA-templated	K08065//nuclear transcription Y subunit beta	gi|460383634|ref|XP_004237524.1|//PREDICTED: nuclear transcription factor Y subunit B-10-like [Solanum lycopersicum];gi|568214828|ref|NP_001274952.1|//transcription factor NF-Y CCAAT-binding-like protein-like [Solanum tuberosum]
Solyc01g099010.3.1	1536	173.986097545404	36.0164243397399	-2.27224516662134	1.72172412417805e-05	Down	2.56833902823936e-06	NA	NA	NA	K21026	gi|460368678|ref|XP_004230192.1|//PREDICTED: acetylajmalan esterase isoform X1 [Solanum lycopersicum]
Solyc07g006280.3.1	2073	3813.96067883456	13901.9999972689	1.86593057480805	0.000248301246035481	Up	4.76790784962953e-05	NA	NA	NA	K17345//tetraspanin-5;K17294	gi|970042420|ref|XP_015082598.1|//PREDICTED: tetraspanin-8-like [Solanum pennellii]
Solyc03g006700.3.1	1293	38.5063933080258	282.508615940772	2.87512496258133	7.71512663276449e-05	Up	1.31250327836354e-05	NA	GO:0046872//metal ion binding;GO:0003824//catalytic activity	GO:0008152//metabolic process;GO:0006950//response to stress	K00430//peroxidase [EC:1.11.1.7]	gi|460376706|ref|XP_004234138.1|//PREDICTED: suberization-associated anionic peroxidase 2-like [Solanum lycopersicum]
Solyc04g079530.3.1	3080	536.748962649812	1076.79488662057	1.00442406117782	0.0122504818120011	Up	0.00366902569552068	NA	NA	NA	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460384996|ref|XP_004238192.1|//PREDICTED: protein NRT1/ PTR FAMILY 4.5-like [Solanum lycopersicum]
Solyc02g064940.1.1	1395	2040.11781409617	88.5343135710529	-4.52627194387355	1.5722994760982e-09	Down	1.14869053718222e-10	NA	NA	NA	K02984//small subunit ribosomal protein S3Ae;K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|460375301|ref|XP_004233445.1|//PREDICTED: uncharacterized protein At4g06744-like [Solanum lycopersicum]
Solyc06g036100.3.1	2702	167.593610232124	25.1014210144125	-2.7391262011995	2.01213333150923e-09	Down	1.49402474890651e-10	NA	NA	NA	NA	gi|460390197|ref|XP_004240725.1|//PREDICTED: putative transporter arsB [Solanum lycopersicum]
Solyc02g087070.3.1	3105	13.6537483180806	1737.64786529042	6.99169487530267	3.35663911064615e-12	Up	1.61526058291493e-13	NA	GO:0016209//antioxidant activity;GO:0005506//iron ion binding	GO:0008152//metabolic process;GO:0006950//response to stress	K10529//alpha-dioxygenase [EC:1.-.-.-]	gi|930425278|ref|NP_001234410.2|//alpha-DOX1 [Solanum lycopersicum]
Solyc04g082725.1.1	2966	568.753853653689	161.114959981937	-1.81971395677033	0.000139625224085441	Down	2.52884659248233e-05	NA	NA	NA	K16290//xylem cysteine proteinase [EC:3.4.22.-]	gi|460385525|ref|XP_004238454.1|//PREDICTED: xylem cysteine proteinase 1 [Solanum lycopersicum]
Solyc09g056135.1.1	1717	230.259632706451	106.055020563489	-1.11844859287597	0.0116895076367667	Down	0.00348062779066462	GO:0005840//ribosome;GO:0005622//intracellular	GO:0003735//structural constituent of ribosome	GO:0006412//translation	K02877//large subunit ribosomal protein L15e	gi|460392627|ref|XP_004241917.1|//PREDICTED: 60S ribosomal protein L15 [Solanum lycopersicum]
Solyc08g078390.3.1	2556	1721.13077662202	5950.78588145966	1.7897234865305	1.91514957587648e-07	Up	1.96187476928586e-08	GO:0042579//microbody	GO:0016634//oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor;GO:0050662//coenzyme binding	GO:0009062//fatty acid catabolic process	K00232//acyl-CoA oxidase [EC:1.3.3.6]	gi|350535511|ref|NP_001234198.1|//peroxisomal acyl-CoA oxidase 1A [Solanum lycopersicum]
Solyc06g060270.3.1	3407	82.581108123728	21.7195389666494	-1.92681829774211	0.00179765895524551	Down	0.00042462221557294	NA	NA	NA	NA	gi|723710652|ref|XP_010322926.1|//PREDICTED: uncharacterized protein LOC101250899 [Solanum lycopersicum]
Solyc03g007790.3.1	4258	12.6082454785146	201.872317265353	4.00100365347286	9.35790927219352e-14	Up	3.61019684535571e-15	NA	GO:0030246//carbohydrate binding;GO:0004674//protein serine/threonine kinase activity;GO:0032559//adenyl ribonucleotide binding	GO:0006464//cellular protein modification process;GO:0008037//cell recognition	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460376852|ref|XP_004234210.1|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At5g24080 [Solanum lycopersicum]
Solyc10g083650.1.1	687	5327.98411891124	1115.5959263476	-2.25577521076568	8.31745564492921e-07	Down	9.57369279541576e-08	NA	NA	NA	K03386//peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15];K11187//peroxiredoxin 5, atypical 2-Cys peroxiredoxin [EC:1.11.1.15]	gi|723739187|ref|XP_010312248.1|//PREDICTED: peroxiredoxin-2E-2, chloroplastic [Solanum lycopersicum]
Solyc03g117760.3.1	1627	1113.00267875563	2505.01207550645	1.17036049306626	0.000637875598266686	Up	0.000135121776686655	NA	NA	NA	NA	gi|460380268|ref|XP_004235879.1|//PREDICTED: uncharacterized protein LOC101252570 [Solanum lycopersicum]
Solyc01g095400.3.1	1983	1001.76751297855	3341.89415224333	1.73811830836974	5.01705720205497e-05	Up	8.20779188154886e-06	NA	NA	NA	K10523//speckle-type POZ protein	gi|723661384|ref|XP_010326766.1|//PREDICTED: BTB/POZ domain-containing protein POB1 isoform X2 [Solanum lycopersicum];gi|723661381|ref|XP_010326760.1|//PREDICTED: BTB/POZ domain-containing protein POB1 isoform X1 [Solanum lycopersicum]
Solyc09g090410.3.1	1347	6019.65585450166	1947.21881497062	-1.62826599679277	0.000287931881816555	Down	5.6023722345401e-05	GO:0005840//ribosome;GO:0030529//intracellular ribonucleoprotein complex;GO:0009536//plastid;GO:0009507//chloroplast	GO:0005198//structural molecule activity;GO:0003735//structural constituent of ribosome	GO:0010467//gene expression;GO:0006412//translation	K02902//large subunit ribosomal protein L28	gi|460404568|ref|XP_004247753.1|//PREDICTED: 50S ribosomal protein L28, chloroplastic [Solanum lycopersicum]
Solyc08g042050.3.1	2936	15280.7435850731	2733.73561199736	-2.48276912158078	1.19793770910465e-14	Down	4.05891373779679e-16	GO:0043231//intracellular membrane-bounded organelle	GO:0032559//adenyl ribonucleotide binding;GO:0046914//transition metal ion binding;GO:0042623//ATPase activity, coupled;GO:0003676//nucleic acid binding	NA	K16911//ATP-dependent RNA helicase DDX21 [EC:3.6.4.13]	gi|460398817|ref|XP_004244948.1|//PREDICTED: DEAD-box ATP-dependent RNA helicase 3, chloroplastic [Solanum lycopersicum]
Solyc05g026360.3.1	1966	197.398439683316	27.7387422256963	-2.83113630892031	5.0848029307039e-05	Down	8.32809902993624e-06	NA	NA	NA	K18266//protein NDRG1	gi|460387324|ref|XP_004239328.1|//PREDICTED: pollen-specific protein SF21-like [Solanum lycopersicum];gi|698578940|ref|XP_009776884.1|//PREDICTED: pollen-specific protein SF21-like [Nicotiana sylvestris]
Solyc03g113430.3.1	2497	972.40894043545	9746.32958818929	3.32522394762621	9.73072456907824e-07	Up	1.13745162698037e-07	NA	NA	NA	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460380873|ref|XP_004236178.1|//PREDICTED: protein NRT1/ PTR FAMILY 2.11 [Solanum lycopersicum]
Solyc12g100160.2.1	983	12220.9269551695	3497.28973633217	-1.80504448991529	0.000146914532617948	Down	2.67565381829169e-05	GO:0030529//intracellular ribonucleoprotein complex;GO:0009532//plastid stroma;GO:0009526//plastid envelope	GO:0003723//RNA binding;GO:0005198//structural molecule activity	GO:0010467//gene expression;GO:0003006//developmental process involved in reproduction	K02933//large subunit ribosomal protein L6	gi|460415023|ref|XP_004252860.1|//PREDICTED: 50S ribosomal protein L6, chloroplastic [Solanum lycopersicum]
Solyc01g091780.3.1	1263	954.268303999845	359.203055947587	-1.40959533034106	5.23955339842631e-06	Down	7.04453149997155e-07	NA	NA	NA	NA	gi|460367988|ref|XP_004229852.1|//PREDICTED: protein-ribulosamine 3-kinase, chloroplastic [Solanum lycopersicum]
Solyc10g055200.1.1	585	473.008147004835	17970.3466851951	5.24760939897428	4.01666800383164e-31	Up	2.70991840127303e-33	NA	NA	NA	K01870//isoleucyl-tRNA synthetase [EC:6.1.1.5];K19027//zinc finger FYVE domain-containing protein 26;K14440//SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:3.6.4.12]	gi|460406421|ref|XP_004248663.1|//PREDICTED: dirigent protein 22-like [Solanum lycopersicum]
Solyc01g094190.3.1	1437	328.357781169746	73.5839063496798	-2.1578064716961	9.56999326408178e-06	Down	1.35587984183595e-06	NA	NA	NA	NA	gi|969996886|ref|XP_015065066.1|//PREDICTED: methionine adenosyltransferase 2 subunit beta isoform X2 [Solanum pennellii];gi|460368140|ref|XP_004229927.1|//PREDICTED: methionine adenosyltransferase 2 subunit beta isoform X1 [Solanum lycopersicum]
Solyc11g007250.2.1	1433	89.9186473362681	3.2053749657409	-4.81005529424505	1.46007171700942e-07	Down	1.46235750097075e-08	NA	NA	NA	K08286//protein-serine/threonine kinase [EC:2.7.11.-];K20715	gi|460409116|ref|XP_004249986.1|//PREDICTED: serine/threonine-protein kinase D6PKL2-like [Solanum lycopersicum]
Solyc11g066670.1.1	1404	6745.02342339391	699.260120012507	-3.2699223199107	6.72648926257926e-06	Down	9.24929882572494e-07	NA	NA	NA	K13495//cis-zeatin O-glucosyltransferase [EC:2.4.1.215]	gi|460411198|ref|XP_004251001.1|//PREDICTED: zeatin O-glucosyltransferase-like [Solanum lycopersicum]
Solyc12g098890.2.1	780	4208.80809058807	1529.93214902445	-1.45994405623895	0.0167126138583917	Down	0.00522222461513707	GO:0030529//intracellular ribonucleoprotein complex	GO:0005198//structural molecule activity	GO:0010467//gene expression	K02881//large subunit ribosomal protein L18	gi|460415218|ref|XP_004252957.1|//PREDICTED: 50S ribosomal protein L18, chloroplastic [Solanum lycopersicum]
Solyc11g071270.2.1	2591	279.32038225702	699.391874799906	1.32418018339157	0.000560930077235156	Up	0.000117107848613169	NA	NA	NA	K10581//ubiquitin-conjugating enzyme E2 O [EC:2.3.2.24]	gi|460411551|ref|XP_004251172.1|//PREDICTED: target of Myb protein 1-like [Solanum lycopersicum]
Solyc02g092215.1.1	1323	794.975879033266	235.572944434112	-1.75473723207926	0.0333158500856103	Down	0.0116334756076486	NA	NA	NA	K08238//xyloglucan 6-xylosyltransferase [EC:2.4.2.39]	gi|460372235|ref|XP_004231937.1|//PREDICTED: putative glycosyltransferase 7 [Solanum lycopersicum]
Solyc04g008960.3.1	947	99.3051016491109	38.0642227114471	-1.38343221790786	0.0109962637383292	Down	0.00325239871640236	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K03868//RING-box protein 1	gi|460382261|ref|XP_004236858.1|//PREDICTED: putative GEM-like protein 8 [Solanum lycopersicum]
Solyc08g068680.3.1	1633	428.133885618377	7789.14502106	4.18533104841259	1.9351147614902e-07	Up	1.98430770421184e-08	NA	GO:0048037//cofactor binding;GO:0016830//carbon-carbon lyase activity	GO:0043436//oxoacid metabolic process	K01590//histidine decarboxylase [EC:4.1.1.22]	gi|350538737|ref|NP_001233845.1|//aromatic amino acid decarboxylase 1A [Solanum lycopersicum]
Solyc08g062280.2.1	877	31.4369372862125	4.82063265217469	-2.70516627024774	0.000996601923744045	Down	0.000221363905754837	NA	NA	NA	K01206//alpha-L-fucosidase [EC:3.2.1.51]	gi|970019201|ref|XP_015070795.1|//PREDICTED: alpha-L-fucosidase 1-like [Solanum pennellii]
Solyc01g111820.2.1	588	21.8225489525615	361.221675917594	4.04899293896159	1.4798733752996e-07	Up	1.48605146602696e-08	NA	NA	NA	NA	gi|802633870|ref|XP_012077716.1|//PREDICTED: uncharacterized protein LOC105638508 [Jatropha curcas]
Solyc09g075950.1.1	2121	79.1477086643094	7.2388527642252	-3.45071460700688	2.16316042742135e-06	Down	2.70274107377232e-07	NA	GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding	NA	K09489//heat shock 70kDa protein 4	gi|460403776|ref|XP_004247363.1|//PREDICTED: heat shock 70 kDa protein 8 [Solanum lycopersicum];gi|697163939|ref|XP_009590791.1|//PREDICTED: heat shock 70 kDa protein 8 [Nicotiana tomentosiformis]
Solyc01g008910.2.1	1892	573.221303791768	29.9727261943077	-4.25737001195024	1.76396521815095e-16	Down	4.79324080823037e-18	NA	NA	NA	K14494//DELLA protein	gi|460365195|ref|XP_004228489.1|//PREDICTED: scarecrow-like protein 3 [Solanum lycopersicum]
Solyc09g065300.3.1	606	709.272265731451	239.028090100163	-1.56915936502786	6.23710145674446e-08	Down	5.8725653346267e-09	NA	NA	NA	K08815//tau tubulin kinase [EC:2.7.11.26];K11654//SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:3.6.4.-]	gi|970053267|ref|XP_015088268.1|//PREDICTED: uncharacterized protein LOC107031422 isoform X1 [Solanum pennellii]
Solyc03g113920.3.1	3149	3302.17460151092	329.566316029481	-3.32477570264631	3.52148185973657e-37	Down	1.37824509941979e-39	NA	GO:0005516//calmodulin binding	GO:0006950//response to stress	NA	gi|460380800|ref|XP_004236142.1|//PREDICTED: uncharacterized protein LOC101256576 [Solanum lycopersicum];gi|970017786|ref|XP_015070037.1|//PREDICTED: calmodulin-binding protein 60 A [Solanum pennellii]
Solyc10g084220.2.1	4646	538.124125296719	189.349029128393	-1.5068909635166	5.11808891974867e-06	Down	6.86786943159953e-07	NA	GO:0008270//zinc ion binding	GO:0006355//regulation of transcription, DNA-templated	K17604//zinc finger SWIM domain-containing protein 3;K13963//serpin B	gi|460408118|ref|XP_004249494.1|//PREDICTED: protein FAR1-RELATED SEQUENCE 12-like [Solanum lycopersicum]
Solyc12g011130.2.1	984	243.659058321298	681.57345626406	1.48400529373386	3.2796236032716e-10	Up	2.15764710741553e-11	GO:0016020//membrane;GO:0043231//intracellular membrane-bounded organelle;GO:0005622//intracellular	GO:0032561//guanyl ribonucleotide binding;GO:0005525//GTP binding	GO:0048193//Golgi vesicle transport;GO:0007264//small GTPase mediated signal transduction;GO:0035556//intracellular signal transduction	K07877//Ras-related protein Rab-2A	gi|460412868|ref|XP_004251818.1|//PREDICTED: ras-related protein RABB1c-like [Solanum lycopersicum]
Solyc11g066520.2.1	1579	398.811296167638	120.817089045942	-1.72288174209925	1.16203082094783e-07	Down	1.14565808908865e-08	NA	NA	NA	K09646//serine carboxypeptidase 1 [EC:3.4.16.-]	gi|460411178|ref|XP_004250991.1|//PREDICTED: serine carboxypeptidase-like 51 [Solanum lycopersicum]
Solyc05g013960.3.1	3508	547.01234502006	170.09189732982	-1.6852589752932	0.000436112168507268	Down	8.85781722899993e-05	NA	NA	NA	K20463//oxysterol-binding protein-related protein 3/6/7;K20456//oxysterol-binding protein 1	gi|460386953|ref|XP_004239157.1|//PREDICTED: oxysterol-binding protein-related protein 1D [Solanum lycopersicum]
Solyc08g065360.3.1	2647	351.328234963302	114.055938766842	-1.62307795719106	7.66200943012248e-05	Down	1.30232454902932e-05	NA	NA	NA	NA	gi|460399155|ref|XP_004245107.1|//PREDICTED: K(+) efflux antiporter 4 [Solanum lycopersicum]
Solyc08g078490.3.1	1509	147.123715578681	39.3298940179182	-1.90333161650913	0.000100794224643746	Down	1.75905233257052e-05	NA	GO:0016741//transferase activity, transferring one-carbon groups;GO:0016811//hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	GO:0006188//IMP biosynthetic process	K01433//formyltetrahydrofolate deformylase [EC:3.5.1.10]	gi|970044174|ref|XP_015083494.1|//PREDICTED: formyltetrahydrofolate deformylase 2, mitochondrial-like [Solanum pennellii]
Solyc07g062870.3.1	825	5282.68874700229	1533.18598664427	-1.78473969258322	0.000365649216875891	Down	7.28625334907782e-05	NA	NA	NA	K02968//small subunit ribosomal protein S20	gi|460397388|ref|XP_004244249.1|//PREDICTED: 30S ribosomal protein S20, chloroplastic [Solanum lycopersicum]
Solyc11g010350.2.1	3253	105.401844457413	25.9942041059353	-2.01963822495873	0.00319468425043246	Down	0.000807332178316828	NA	NA	NA	K02540//DNA replication licensing factor MCM2 [EC:3.6.4.12]	gi|460409397|ref|XP_004250125.1|//PREDICTED: probable glucan 1,3-beta-glucosidase A isoform X1 [Solanum lycopersicum]
Solyc03g123780.3.1	3264	258.475322552448	1283.02732616831	2.3114534439382	5.29487799785192e-08	Up	4.90456781881066e-09	GO:0016020//membrane	GO:0000166//nucleotide binding;GO:0004672//protein kinase activity;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13415//protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1]	gi|460379531|ref|XP_004235515.1|//PREDICTED: tyrosine-sulfated glycopeptide receptor 1 [Solanum lycopersicum]
BGI_novel_G000043	1910	41.4576613327745	6.91847900713666	-2.58311192632995	0.00228209238765858	Down	0.000552811517825359	NA	NA	NA	NA	NA
BGI_novel_G000027	3519	65.6670803412937	0.612334799236697	-6.74470582764534	3.80009952696933e-07	Down	4.10775630990423e-08	NA	NA	NA	NA	gi|969996579|ref|XP_015063847.1|//PREDICTED: poly(A) polymerase I-like [Solanum pennellii]
Solyc06g083250.3.1	1184	405.476543091452	94.6979023681298	-2.09821408227846	1.05558549911609e-07	Down	1.03402366619841e-08	NA	NA	NA	NA	gi|460393648|ref|XP_004242421.1|//PREDICTED: SKI/DACH domain-containing protein 1 [Solanum lycopersicum]
Solyc02g065480.2.1	2203	156.347657491784	13.2013729256185	-3.56599772306767	9.26873977270044e-10	Down	6.54007916718426e-11	NA	NA	NA	K20495	gi|723677191|ref|XP_010317147.1|//PREDICTED: uncharacterized protein LOC101258527 [Solanum lycopersicum]
Solyc05g053120.1.1	1410	813.186243735527	32.6464774592866	-4.63858657092481	3.41420955003466e-09	Down	2.62670661669582e-10	NA	NA	NA	K13495//cis-zeatin O-glucosyltransferase [EC:2.4.1.215]	gi|460389145|ref|XP_004240219.1|//PREDICTED: zeatin O-xylosyltransferase-like [Solanum lycopersicum]
Solyc10g086280.2.1	1420	6222.73992511009	24334.6180546381	1.9673882746854	7.59679335014717e-05	Up	1.28982382995081e-05	NA	NA	NA	NA	gi|460408362|ref|XP_004249614.1|//PREDICTED: uncharacterized protein LOC101259996 [Solanum lycopersicum]
Solyc02g091240.1.1	1359	706.092814665141	145.701582192187	-2.27684129180235	4.82252405908251e-06	Down	6.42631709826301e-07	GO:0031224//intrinsic component of membrane	NA	GO:0006810//transport	K07088//uncharacterized protein;K01807//ribose 5-phosphate isomerase A [EC:5.3.1.6]	gi|460372379|ref|XP_004232008.1|//PREDICTED: uncharacterized transporter C5D6.04 [Solanum lycopersicum]
Solyc02g071010.1.1	798	26716.3821465104	975.596262488604	-4.7752966141391	2.74367061048526e-11	Down	1.52470108983402e-12	GO:0031224//intrinsic component of membrane;GO:0009521//photosystem;GO:0009534//chloroplast thylakoid	GO:0043169//cation binding;GO:0046906//tetrapyrrole binding	GO:0006464//cellular protein modification process;GO:0006091//generation of precursor metabolites and energy	K08912//light-harvesting complex II chlorophyll a/b binding protein 1	gi|970007787|ref|XP_015064801.1|//PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like [Solanum pennellii]
Solyc12g043100.2.1	3853	159.820571173607	54.0546797212212	-1.56396168739569	0.00424994861670068	Down	0.00111539765208698	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial	gi|723750913|ref|XP_010314275.1|//PREDICTED: pentatricopeptide repeat-containing protein At3g16010 [Solanum lycopersicum];gi|697179183|ref|XP_009598568.1|//PREDICTED: pentatricopeptide repeat-containing protein At3g16010 [Nicotiana tomentosiformis]
Solyc06g069000.3.1	1236	155.647228424173	3.87372095056587	-5.32841604612581	1.00579857846727e-15	Down	2.97675589422622e-17	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial	gi|723708880|ref|XP_010322619.1|//PREDICTED: uncharacterized GPI-anchored protein At4g28100-like [Solanum lycopersicum]
Solyc01g087003.1.1	1169	24.1620419808035	78.4139572249777	1.69836808370392	0.00720002643605743	Up	0.00202222302056406	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial	gi|699114723|ref|NP_001289446.1|//pentatricopeptide repeat-containing protein At1g62670, mitochondrial-like [Nicotiana tomentosiformis];gi|971547182|ref|XP_015163362.1|//PREDICTED: probable carbohydrate esterase At4g34215 [Solanum tuberosum]
Solyc07g005950.3.1	3812	1770.60299127688	264.427857375061	-2.74329468656798	2.76460184998314e-11	Down	1.53852339422425e-12	GO:0005634//nucleus	NA	GO:0007049//cell cycle	K17964//leucine-rich PPR motif-containing protein, mitochondrial	gi|723712237|ref|XP_010323204.1|//PREDICTED: pentatricopeptide repeat-containing protein At4g30825, chloroplastic [Solanum lycopersicum]
Solyc07g062490.1.1	894	151.237409417396	2174.52421572342	3.84581282740495	7.87844447022147e-07	Up	9.01257867866024e-08	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723718851|ref|XP_004244275.2|//PREDICTED: epidermis-specific secreted glycoprotein EP1-like [Solanum lycopersicum]
Solyc03g114310.3.1	1874	241.454737223849	61.1447011063115	-1.98145338564442	0.0041246948141673	Down	0.00107714372551275	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process	K04424//sterile alpha motif and leucine zipper containing kinase AZK [EC:2.7.11.25];K17535//serine/threonine-protein kinase TNNI3K [EC:2.7.11.1];K04365//B-Raf proto-oncogene serine/threonine-protein kinase [EC:2.7.11.1]	gi|970013745|ref|XP_015067849.1|//PREDICTED: serine/threonine-protein kinase HT1-like [Solanum pennellii]
Solyc12g007060.1.1	294	100.620581378059	20.6348408116445	-2.28577121677387	0.0135248863956579	Down	0.00411221478788511	NA	NA	NA	NA	gi|723747488|ref|XP_010313728.1|//PREDICTED: putative uncharacterized protein DDB_G0284695 [Solanum lycopersicum]
Solyc08g013740.3.1	1986	31.4370480726125	0.851774908413904	-5.20584971358885	2.20643466699205e-05	Down	3.37281518165141e-06	GO:0016021//integral component of membrane	GO:0016741//transferase activity, transferring one-carbon groups;GO:0008168//methyltransferase activity	GO:0006730//one-carbon metabolic process;GO:0032259//methylation	K16302//metal transporter CNNM;K15449//tRNA wybutosine-synthesizing protein 1 [EC:4.1.3.44]	gi|460398371|ref|XP_004244735.1|//PREDICTED: probable methyltransferase PMT18 [Solanum lycopersicum]
Solyc07g052350.3.1	3830	3688.9816014284	19003.6285611714	2.36498041487298	0.000152739641335722	Up	2.79882241242884e-05	NA	GO:0016836//hydro-lyase activity;GO:0051536//iron-sulfur cluster binding	NA	K01681//aconitate hydratase [EC:4.2.1.3]	gi|460395806|ref|XP_004243472.1|//PREDICTED: aconitate hydratase, cytoplasmic [Solanum lycopersicum]
Solyc01g012580.1.1	8032	55.8276891945986	295.808284711325	2.40560971180188	0.000161392326585954	Up	2.97602445065124e-05	NA	NA	NA	K11592//endoribonuclease Dicer [EC:3.1.26.-]	gi|971571018|ref|XP_015169591.1|//PREDICTED: endoribonuclease Dicer homolog 2-like isoform X2 [Solanum tuberosum];gi|970036731|ref|XP_015079707.1|//PREDICTED: endoribonuclease Dicer homolog 2-like [Solanum pennellii]
Solyc11g010980.2.1	2150	8.44579550838797	0.753812758947611	-3.48595519747517	0.0481510011410876	Down	0.0178941956678337	NA	GO:0005488//binding	NA	K00083//cinnamyl-alcohol dehydrogenase [EC:1.1.1.195]	gi|723741738|ref|XP_010312669.1|//PREDICTED: 8-hydroxygeraniol dehydrogenase-like [Solanum lycopersicum]
Solyc04g064820.3.1	1960	272.023990271815	567.531058329219	1.06096545565111	0.000866677439621877	Up	0.000189953158825728	NA	NA	GO:0006904//vesicle docking involved in exocytosis;GO:0006887//exocytosis	K12479//vacuolar protein sorting-associated protein 45	gi|460384075|ref|XP_004237740.1|//PREDICTED: vacuolar protein sorting-associated protein 45 homolog isoform X1 [Solanum lycopersicum];gi|698534854|ref|XP_009763995.1|//PREDICTED: vacuolar protein sorting-associated protein 45 homolog [Nicotiana sylvestris];gi|723693614|ref|XP_010320038.1|//PREDICTED: vacuolar protein sorting-associated protein 45 homolog isoform X2 [Solanum lycopersicum]
Solyc07g054770.1.1	270	13.7209913024503	57.6040320125417	2.069785081226	0.00564565677253723	Up	0.00153517508217868	NA	NA	NA	NA	gi|723715060|ref|XP_010323709.1|//PREDICTED: uncharacterized protein LOC101254505 [Solanum lycopersicum]
Solyc02g081560.1.1	201	10.7988488303	86.399974584673	3.00015336037164	7.64206708222196e-07	Up	8.70514276251316e-08	NA	NA	NA	NA	gi|460373699|ref|XP_004232652.1|//PREDICTED: uncharacterized protein LOC101260892 [Solanum lycopersicum]
Solyc09g090840.3.1	2734	1770.27862633986	431.940600412161	-2.03507161106338	1.75975341282331e-11	Down	9.39304788714396e-13	NA	GO:0016884//carbon-nitrogen ligase activity, with glutamine as amido-N-donor	GO:0010467//gene expression	K02434//aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7]	gi|723732663|ref|XP_010326798.1|//PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit B, chloroplastic/mitochondrial [Solanum lycopersicum]
BGI_novel_G000222	695	0.7439818293636	36.1122574166554	5.60107741121433	4.85029747884613e-07	Up	5.33518259284141e-08	NA	NA	NA	K07441//beta-1,4-N-acetylglucosaminyltransferase [EC:2.4.1.141]	gi|460387861|ref|XP_004239591.1|//PREDICTED: uncharacterized protein LOC101259247 [Solanum lycopersicum]
Solyc04g005050.1.1	1104	375.665362847747	3814.46657683107	3.34396131395625	5.66387554862258e-09	Up	4.51792667140761e-10	NA	GO:0070011//peptidase activity, acting on L-amino acid peptides;GO:0046872//metal ion binding	GO:0008152//metabolic process	K07761//gelatinase A [EC:3.4.24.24]	gi|525314090|ref|NP_001266203.1|//matrix metalloproteinase precursor [Solanum lycopersicum]
Solyc08g083320.3.1	6254	12530.7057157999	2793.82019541944	-2.16515658804131	1.07576439492211e-15	Down	3.19184605023855e-17	GO:0009501//amyloplast;GO:0009536//plastid;GO:0009507//chloroplast	GO:0046527//glucosyltransferase activity;GO:0004373//glycogen (starch) synthase activity;GO:0033840//NDP-glucose-starch glucosyltransferase activity	GO:0019252//starch biosynthetic process;GO:0005977//glycogen metabolic process;GO:0005982//starch metabolic process	K13679//granule-bound starch synthase [EC:2.4.1.242]	gi|747069158|ref|XP_011081361.1|//PREDICTED: granule-bound starch synthase 1, chloroplastic/amyloplastic [Sesamum indicum];gi|460399837|ref|XP_004245443.1|//PREDICTED: granule-bound starch synthase 1, chloroplastic/amyloplastic [Solanum lycopersicum]
Solyc07g026650.3.1	1354	0.639987055407633	64.3276766085518	6.65125304706653	7.25963440509964e-07	Up	8.22892061499478e-08	NA	GO:0016641//oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor	GO:0008152//metabolic process	K05933//aminocyclopropanecarboxylate oxidase [EC:1.14.17.4]	gi|350537429|ref|NP_001234037.1|//1-aminocyclopropane-1-carboxylate oxidase [Solanum lycopersicum]
Solyc04g049790.3.1	1687	158.8604242182	551.52147764336	1.79565730814586	6.47453311517861e-08	Up	6.11784010995146e-09	NA	NA	NA	K17278//membrane-associated progesterone receptor component	gi|460383640|ref|XP_004237527.1|//PREDICTED: membrane steroid-binding protein 2-like [Solanum lycopersicum]
Solyc05g006860.3.1	1658	25.2762221550186	112.785270271107	2.15772590834926	0.000294814946280365	Up	5.75058377025924e-05	NA	NA	NA	K03671//thioredoxin 1	gi|970026459|ref|XP_015074539.1|//PREDICTED: thioredoxin H2-like [Solanum pennellii]
Solyc02g080850.1.1	1269	0.400704107882498	17.5315694807632	5.45127404634768	0.000110355391377376	Up	1.94853693512238e-05	NA	NA	NA	NA	gi|460373789|ref|XP_004232696.1|//PREDICTED: probable F-box protein At4g22030 [Solanum lycopersicum]
Solyc02g031840.3.1	3433	1133.66953627141	287.108569262084	-1.98133186107516	1.24817241086656e-10	Down	7.62544573360029e-12	GO:0044464//cell part	GO:0046873//metal ion transmembrane transporter activity	GO:0034220//ion transmembrane transport;GO:0030001//metal ion transport	K03549//KUP system potassium uptake protein	gi|460371520|ref|XP_004231584.1|//PREDICTED: potassium transporter 11-like [Solanum lycopersicum]
Solyc04g074450.1.1	945	647.655099943061	1897.51087426104	1.55081051868359	0.0023455747937769	Up	0.000570568849865366	NA	NA	NA	K14299//nucleoporin SEH1	gi|723694393|ref|XP_010320183.1|//PREDICTED: protein EXORDIUM-like [Solanum lycopersicum]
Solyc01g095060.3.1	1554	55.2866500753622	363.0968654984	2.71535141207834	1.41814672982601e-12	Up	6.45957694888695e-14	GO:0016021//integral component of membrane	NA	NA	NA	gi|969999220|ref|XP_015081541.1|//PREDICTED: uncharacterized protein At1g01500, partial [Solanum pennellii];gi|971570826|ref|XP_015169528.1|//PREDICTED: uncharacterized protein At1g01500 [Solanum tuberosum]
Solyc05g055185.1.1	797	324.648977583039	6.70264009235118	-5.59800738727445	6.88077606291719e-09	Down	5.54829091808329e-10	NA	NA	NA	NA	gi|970026869|ref|XP_015074748.1|//PREDICTED: uncharacterized protein LOC107018711 [Solanum pennellii];gi|460388154|ref|XP_004239734.1|//PREDICTED: uncharacterized protein LOC101247619 [Solanum lycopersicum]
Solyc01g091500.3.1	4484	525.799993527011	262.284997339019	-1.00337883616393	0.000967956811363395	Down	0.000214568329997693	NA	NA	NA	K06669//structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6);K11548//kinetochore protein Nuf2;K20283//golgin subfamily A member 4;K12472//epidermal growth factor receptor substrate 15;K10357//myosin V	gi|460370657|ref|XP_004231167.1|//PREDICTED: uncharacterized protein LOC101256431 isoform X1 [Solanum lycopersicum];gi|723660714|ref|XP_010325817.1|//PREDICTED: uncharacterized protein LOC101256431 isoform X2 [Solanum lycopersicum]
Solyc12g015920.2.1	571	0.612792530287057	7.41441897041816	3.59686302401048	0.0385520245449509	Up	0.0137607792993309	NA	NA	NA	K19307//25S rRNA (uracil2634-N3)-methyltransferase [EC:2.1.1.313]	gi|723748871|ref|XP_010313956.1|//PREDICTED: uncharacterized protein LOC104644861 [Solanum lycopersicum]
Solyc01g107350.3.1	2999	793.279842631224	283.790552768318	-1.48300332666718	0.000444036018761992	Down	9.03365360967256e-05	NA	NA	NA	K11426//SET and MYND domain-containing protein	gi|460369746|ref|XP_004230718.1|//PREDICTED: uncharacterized protein LOC101246097 [Solanum lycopersicum]
Solyc05g007460.3.1	1299	372.251518472793	1053.11656157889	1.50031548738887	0.0103743485642229	Up	0.00304409094593569	NA	GO:0016709//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen;GO:0046914//transition metal ion binding	GO:0006631//fatty acid metabolic process	K04713//sphinganine C4-monooxygenase [EC:1.14.18.5]	gi|460386215|ref|XP_004238795.1|//PREDICTED: sphinganine C(4)-monooxygenase 1-like [Solanum lycopersicum]
Solyc06g053710.3.1	3170	453.873981387582	9077.71938248824	4.32196619890036	1.92797275825627e-20	Up	3.35624298292014e-22	GO:0031090//organelle membrane;GO:0016021//integral component of membrane;GO:0005789//endoplasmic reticulum membrane	GO:0000155//phosphorelay sensor kinase activity;GO:0051740//ethylene binding;GO:0032559//adenyl ribonucleotide binding;GO:0038199//ethylene receptor activity;GO:0004871//signal transducer activity;GO:0004673//protein histidine kinase activity	GO:0010105//negative regulation of ethylene-activated signaling pathway;GO:0023014//signal transduction by protein phosphorylation;GO:0018106//peptidyl-histidine phosphorylation;GO:0000160//phosphorelay signal transduction system;GO:0006468//protein phosphorylation;GO:0006351//transcription, DNA-templated	K14509//ethylene receptor [EC:2.7.13.-]	gi|350535641|ref|NP_001234205.1|//ethylene receptor homolog precursor [Solanum lycopersicum]
Solyc05g052750.3.1	2207	192.683992574792	3823.17200853221	4.31046148168338	2.53400230261676e-20	Up	4.48654798621948e-22	NA	NA	NA	NA	gi|460388548|ref|XP_004239929.1|//PREDICTED: uncharacterized protein LOC101254095 [Solanum lycopersicum]
Solyc01g090410.3.1	5726	362.646458236442	59.1055392132503	-2.61719851161004	3.33486597564366e-07	Down	3.56259351654791e-08	NA	NA	NA	K01074//palmitoyl-protein thioesterase [EC:3.1.2.22]	gi|460367796|ref|XP_004229756.1|//PREDICTED: palmitoyl-protein thioesterase 1 isoform X1 [Solanum lycopersicum]
Solyc09g090930.3.1	2537	961.114297005567	257.504747612325	-1.90010897694266	8.17812777326574e-08	Down	7.86780519710708e-09	NA	NA	NA	NA	gi|460404646|ref|XP_004247792.1|//PREDICTED: uncharacterized protein LOC101245498 [Solanum lycopersicum]
Solyc01g109110.3.1	4422	364.811292872238	2599.24035286636	2.83286775212573	5.97870388972403e-05	Up	9.97490629581212e-06	NA	GO:0000166//nucleotide binding	NA	K04630//guanine nucleotide-binding protein G(i) subunit alpha	gi|460369994|ref|XP_004230840.1|//PREDICTED: extra-large guanine nucleotide-binding protein 1-like [Solanum lycopersicum]
Solyc09g075020.3.1	5110	12820.0908708974	57087.3817174914	2.15476540735604	0.000877459556524108	Up	0.000192479852771149	GO:0031224//intrinsic component of membrane;GO:0016021//integral component of membrane	GO:0015405//P-P-bond-hydrolysis-driven transmembrane transporter activity;GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;GO:0017111//nucleoside-triphosphatase activity;GO:0042626//ATPase activity, coupled to transmembrane movement of substances	GO:0006810//transport;GO:0055085//transmembrane transport;GO:0009207//purine ribonucleoside triphosphate catabolic process	K05666//ATP-binding cassette, subfamily C (CFTR/MRP), member 2;K05665//ATP-binding cassette, subfamily C (CFTR/MRP), member 1	gi|698522174|ref|XP_009757900.1|//PREDICTED: ABC transporter C family member 14-like [Nicotiana sylvestris];gi|460403906|ref|XP_004247427.1|//PREDICTED: ABC transporter C family member 4 [Solanum lycopersicum]
Solyc03g026370.1.1	336	13.8662593249941	60.0530574129631	2.11465905110306	0.0386675177153707	Up	0.013804886114426	NA	NA	NA	K03363//cell division cycle 20, cofactor of APC complex	gi|723679395|ref|XP_010317565.1|//PREDICTED: uncharacterized protein LOC101263880 [Solanum lycopersicum]
Solyc05g052950.3.1	4402	205.014889559247	24.049301157587	-3.09166181493086	7.71218517363685e-13	Down	3.38924493801918e-14	NA	GO:0016772//transferase activity, transferring phosphorus-containing groups	GO:0006796//phosphate-containing compound metabolic process	K10615//E3 ubiquitin-protein ligase HERC4 [EC:2.3.2.26]	gi|460388518|ref|XP_004239914.1|//PREDICTED: ultraviolet-B receptor UVR8 isoform X1 [Solanum lycopersicum]
Solyc04g078690.3.1	1489	434.880686417851	2320.85881104327	2.41596721581364	2.9071410812481e-08	Up	2.56168239006654e-09	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K12126//phytochrome-interacting factor 3	gi|723695298|ref|XP_010320324.1|//PREDICTED: transcription factor SPATULA-like [Solanum lycopersicum]
Solyc03g117020.3.1	1098	1099.92547103032	7101.13012672878	2.69064287147871	6.51430892949703e-14	Up	2.45974166750428e-15	GO:0044464//cell part	NA	NA	NA	gi|460380383|ref|XP_004235936.1|//PREDICTED: stromal cell-derived factor 2-like protein [Solanum lycopersicum]
Solyc02g069925.1.1	3655	1001.38579734684	139.606280688103	-2.84256214601878	7.71820891230551e-09	Down	6.261640258966e-10	NA	NA	NA	K14760//acyl-activating enzyme 14 [EC:6.2.1.26];K01054//acylglycerol lipase [EC:3.1.1.23]	gi|460374731|ref|XP_004233163.1|//PREDICTED: 2-succinylbenzoate--CoA ligase, chloroplastic/peroxisomal [Solanum lycopersicum]
Solyc09g063140.3.1	2272	3304.39390410842	974.904477551462	-1.76105290144032	0.00160759772898605	Down	0.000374994281645844	NA	NA	NA	K02693//photosystem I subunit IV	gi|460403269|ref|XP_004247115.1|//PREDICTED: protein LOW PSII ACCUMULATION 1, chloroplastic [Solanum lycopersicum]
Solyc09g091390.3.1	698	105.099521013917	21.9067814738721	-2.26230664884755	0.0383740237740031	Down	0.0136757880312824	NA	NA	NA	NA	gi|460404704|ref|XP_004247821.1|//PREDICTED: glycine-rich cell wall structural protein 1-like [Solanum lycopersicum]
Solyc06g071790.3.1	1724	28723.3417635886	4974.73006281316	-2.52953345674457	3.15037382602641e-16	Down	8.8658574573205e-18	GO:0009536//plastid	GO:0008135//translation factor activity, RNA binding;GO:0032561//guanyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity	GO:0006412//translation;GO:0009207//purine ribonucleoside triphosphate catabolic process	K02358//elongation factor Tu	gi|460391817|ref|XP_004241515.1|//PREDICTED: elongation factor TuB, chloroplastic-like [Solanum lycopersicum]
Solyc09g014720.2.1	3506	38.9439395658416	837.863734238986	4.42724489118221	4.11990423643894e-05	Up	6.63717985309717e-06	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723726950|ref|XP_004246830.2|//PREDICTED: wall-associated receptor kinase 2-like [Solanum lycopersicum]
Solyc10g083170.2.1	1147	50.9016474985938	7.83728388998824	-2.69928668994505	0.0217637910861754	Down	0.0071031666449438	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K13070//momilactone-A synthase [EC:1.1.1.295];K09841//xanthoxin dehydrogenase [EC:1.1.1.288]	gi|460408703|ref|XP_004249781.1|//PREDICTED: secoisolariciresinol dehydrogenase-like [Solanum lycopersicum]
Solyc09g057960.1.1	786	386.801503761073	1359.26573900001	1.81316222458723	0.00737329748249774	Up	0.00207666004837308	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460403598|ref|XP_004247276.1|//PREDICTED: cysteine-rich repeat secretory protein 55-like [Solanum lycopersicum]
Solyc12g096730.3.1	1796	1.10287953487148	22.9750743331953	4.38072240698309	9.94988573664632e-05	Up	1.73422043031751e-05	NA	GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds	GO:0044238//primary metabolic process;GO:0045229//external encapsulating structure organization	K01184//polygalacturonase [EC:3.2.1.15]	gi|723753361|ref|XP_010314782.1|//PREDICTED: polygalacturonase-like [Solanum lycopersicum]
Solyc10g007120.3.1	1513	1924.53751856209	257.688450269593	-2.90081201512329	7.04218836984075e-08	Down	6.69884625012435e-09	NA	NA	NA	NA	gi|460405581|ref|XP_004248254.1|//PREDICTED: uncharacterized protein LOC101264559 [Solanum lycopersicum]
Solyc06g060100.3.1	4922	277.146277873333	632.688419044025	1.19084755639735	0.00361629424279863	Up	0.00093076307389759	NA	GO:0046914//transition metal ion binding;GO:0016861//intramolecular oxidoreductase activity, interconverting aldoses and ketoses	GO:0044238//primary metabolic process	K01809//mannose-6-phosphate isomerase [EC:5.3.1.8]	gi|460392883|ref|XP_004242042.1|//PREDICTED: mannose-6-phosphate isomerase 1-like [Solanum lycopersicum]
Solyc08g078080.2.1	1835	40.6417723264324	472.87289878253	3.54041723830218	7.70273404687187e-21	Up	1.30350427064255e-22	NA	NA	NA	K15271//ATP-dependent DNA helicase HFM1/MER3 [EC:3.6.4.12];K01074//palmitoyl-protein thioesterase [EC:3.1.2.22];K11000//callose synthase [EC:2.4.1.-]	gi|460401300|ref|XP_004246164.1|//PREDICTED: pentatricopeptide repeat-containing protein At4g16835, mitochondrial [Solanum lycopersicum]
Solyc12g005290.2.1	6718	111.955777147573	264.570448607161	1.24072295158834	0.0178055964222605	Up	0.00562879317344532	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460412184|ref|XP_004251482.1|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 isoform X2 [Solanum lycopersicum]
Solyc07g049300.3.1	1934	498.22521809364	65.9621198766736	-2.91708837700328	0.000600981691043699	Down	0.000126701671557446	NA	GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds	GO:0044238//primary metabolic process	K01179//endoglucanase [EC:3.2.1.4]	gi|460395907|ref|XP_004243521.1|//PREDICTED: endoglucanase 11 [Solanum lycopersicum]
Solyc10g081630.2.1	1976	203.323101330365	101.594378593257	-1.00095356449314	0.0425750235632423	Down	0.0154776429406703	NA	NA	NA	K11323//histone arginine demethylase JMJD6 [EC:1.14.11.-]	gi|460407898|ref|XP_004249386.1|//PREDICTED: F-box protein At5g06550 [Solanum lycopersicum]
Solyc09g090730.2.1	1473	2703.51889176122	8993.8395247215	1.73409870473846	0.0255291802970053	Up	0.00856047808080585	GO:0016020//membrane	NA	GO:0006810//transport	K03320//ammonium transporter, Amt family	gi|959672202|ref|NP_001304667.1|//ammonium transporter 1 member 1 [Solanum lycopersicum]
Solyc05g055210.2.1	1891	1930.12309565973	947.580396775209	-1.02637260183362	0.0017015224828146	Down	0.000398869647175377	GO:0044424//intracellular part;GO:0005737//cytoplasm	GO:0016149//translation release factor activity, codon specific;GO:0003747//translation release factor activity	GO:0006415//translational termination;GO:0006412//translation	K03265//peptide chain release factor subunit 1	gi|460388146|ref|XP_004239730.1|//PREDICTED: eukaryotic peptide chain release factor subunit 1-3-like [Solanum lycopersicum];gi|697095533|ref|XP_009611781.1|//PREDICTED: eukaryotic peptide chain release factor subunit 1-3-like [Nicotiana tomentosiformis]
Solyc07g007790.3.1	3868	4597.64571346969	1530.06682699801	-1.58730063353153	0.00952397141298755	Down	0.00277007413655665	NA	GO:0035251//UDP-glucosyltransferase activity	GO:0005984//disaccharide metabolic process	K00696//sucrose-phosphate synthase [EC:2.4.1.14]	gi|795881074|ref|NP_001233920.2|//sucrose-phosphate synthase [Solanum lycopersicum]
Solyc03g112150.1.1	1434	13283.8020356777	622.202541737523	-4.41614002947126	9.37433773702213e-14	Down	3.62002903517032e-15	GO:0009536//plastid	GO:0008135//translation factor activity, RNA binding;GO:0032561//guanyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity	GO:0006412//translation;GO:0009207//purine ribonucleoside triphosphate catabolic process	K02358//elongation factor Tu	gi|723687996|ref|XP_010319023.1|//PREDICTED: elongation factor TuA, chloroplastic [Solanum lycopersicum]
Solyc12g015640.2.1	2330	724.545687845588	86.8460189346045	-3.06054504331224	7.86734034638643e-12	Down	3.97061981102103e-13	NA	NA	NA	K15032//mTERF domain-containing protein, mitochondrial	gi|460413069|ref|XP_004251918.1|//PREDICTED: uncharacterized protein LOC101267870 [Solanum lycopersicum]
Solyc01g079180.3.1	1470	67.3178902038314	2.77147279409318	-4.60226521144311	0.000401226524816332	Down	8.07597746387427e-05	GO:0030312//external encapsulating structure	NA	GO:0071555//cell wall organization	K01051//pectinesterase [EC:3.1.1.11]	gi|460367016|ref|XP_004229371.1|//PREDICTED: probable pectinesterase 53 [Solanum lycopersicum]
Solyc04g009530.3.1	1251	1764.80434760532	623.228642304465	-1.50167480680578	7.48101583212902e-10	Down	5.22417776817362e-11	NA	NA	NA	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|723689669|ref|XP_010319296.1|//PREDICTED: protein IN2-1 homolog B isoform X2 [Solanum lycopersicum];gi|460382181|ref|XP_004236818.1|//PREDICTED: protein IN2-1 homolog B isoform X1 [Solanum lycopersicum]
Solyc09g007320.3.1	2220	1267.94038061384	27.8136478487657	-5.51055012922526	3.83340981063685e-09	Down	2.97493634476887e-10	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial	gi|723728484|ref|XP_010326020.1|//PREDICTED: pentatricopeptide repeat-containing protein At3g09650, chloroplastic [Solanum lycopersicum]
Solyc07g056400.1.1	1452	46.0407135303074	573.573609369487	3.63899654851632	1.06906816784163e-20	Up	1.83305262116874e-22	NA	GO:0004672//protein kinase activity	NA	K08286//protein-serine/threonine kinase [EC:2.7.11.-]	gi|460395254|ref|XP_004243199.1|//PREDICTED: serine/threonine-protein kinase WAG2-like [Solanum lycopersicum]
Solyc02g087630.3.1	1929	975.32974613755	2533.78700949527	1.3773332937887	0.000132812104687972	Up	2.39208323338408e-05	NA	GO:0015036//disulfide oxidoreductase activity	GO:0019725//cellular homeostasis;GO:0018904//ether metabolic process	K03671//thioredoxin 1	gi|723671492|ref|XP_010316263.1|//PREDICTED: LOW QUALITY PROTEIN: thioredoxin H2 [Solanum lycopersicum]
Solyc02g020940.3.1	1504	27714.722947418	1858.08595949135	-3.89876343478037	1.85333158302635e-46	Down	3.38501742836928e-49	GO:0009536//plastid	GO:0000166//nucleotide binding	GO:0015977//carbon fixation;GO:0019318//hexose metabolic process	K05298//glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) [EC:1.2.1.13]	gi|460371392|ref|XP_004231523.1|//PREDICTED: glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic-like [Solanum lycopersicum]
Solyc02g093860.3.1	1942	527.54163831923	7879.04552706831	3.90066399734545	3.18450345287457e-11	Up	1.78484177982801e-12	GO:0031224//intrinsic component of membrane	NA	NA	K14209//solute carrier family 36 (proton-coupled amino acid transporter);K15015//solute carrier family 32 (vesicular inhibitory amino acid transporter)	gi|460371954|ref|XP_004231799.1|//PREDICTED: lysine histidine transporter 1-like [Solanum lycopersicum]
Solyc01g010640.3.1	953	3175.01051448458	400.147469543244	-2.98815767853835	1.89658218496755e-13	Down	7.62082747649851e-15	NA	NA	NA	NA	gi|460364999|ref|XP_004228393.1|//PREDICTED: uncharacterized protein LOC101252419 [Solanum lycopersicum]
Solyc12g009470.2.1	4815	3250.45482626612	869.237372626315	-1.90281949494962	1.3331128559535e-07	Down	1.32724930604287e-08	NA	NA	NA	K13457//disease resistance protein RPM1;K00510//heme oxygenase (biliverdin-producing) [EC:1.14.14.18]	gi|970067328|ref|XP_015060747.1|//PREDICTED: putative late blight resistance protein homolog R1B-16 [Solanum pennellii]
Solyc02g089350.3.1	549	648.678039970075	150.099285821497	-2.11158548677553	0.0344747862056958	Down	0.012087792774642	NA	NA	NA	K03860//phosphatidylinositol glycan, class Q;K20887	gi|823683814|ref|NP_001296306.1|//protein GAST1 precursor [Solanum lycopersicum]
Solyc05g011820.2.1	1957	65.6612131942738	26.9028710645182	-1.28728126133623	0.0337956444300566	Down	0.0118236886320453	GO:0005737//cytoplasm	GO:0004252//serine-type endopeptidase activity;GO:0070008//serine-type exopeptidase activity	GO:0006508//proteolysis	K01354//oligopeptidase B [EC:3.4.21.83]	gi|723698370|ref|XP_010320832.1|//PREDICTED: prolyl endopeptidase-like isoform X1 [Solanum lycopersicum];gi|723698376|ref|XP_010320834.1|//PREDICTED: prolyl endopeptidase-like isoform X2 [Solanum lycopersicum]
Solyc02g072180.3.1	940	223.640041836629	465.283312232421	1.05693092461558	0.00823013875331709	Up	0.00234406180908364	NA	GO:0032561//guanyl ribonucleotide binding	GO:0006810//transport;GO:0035556//intracellular signal transduction	K07904//Ras-related protein Rab-11A	gi|460374533|ref|XP_004233065.1|//PREDICTED: ras-related protein RABA1d [Solanum lycopersicum]
Solyc06g075520.3.1	2902	73.322319027535	21.841957116288	-1.74715028333952	0.000423356187607366	Down	8.57032747463696e-05	NA	NA	NA	K05021//chloride intracellular channel protein 1;K05022//chloride intracellular channel protein 2	gi|723710799|ref|XP_010322957.1|//PREDICTED: uncharacterized protein LOC101254215 [Solanum lycopersicum]
Solyc06g033860.2.1	1940	20.1962888216371	57.2702528374859	1.50369575846779	0.0271360283470138	Up	0.00917919551398353	NA	GO:0016639//oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor	GO:0019752//carboxylic acid metabolic process	K00261//glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3]	gi|460390288|ref|XP_004240769.1|//PREDICTED: glutamate dehydrogenase A-like isoform X1 [Solanum lycopersicum]
Solyc09g018230.1.1	2067	196.531657998705	404.371257712693	1.04091873011951	0.0383377858586382	Up	0.0136585864483698	NA	NA	NA	K08332//vacuolar protein 8	gi|460401517|ref|XP_004246269.1|//PREDICTED: U-box domain-containing protein 16 [Solanum lycopersicum]
Solyc02g063450.3.1	3395	6239.21736350212	700.564853412021	-3.1547745546939	2.59161837909072e-16	Down	7.18713312227336e-18	NA	NA	NA	NA	gi|460375349|ref|XP_004233469.1|//PREDICTED: uncharacterized protein LOC101249886 [Solanum lycopersicum]
Solyc03g062910.3.1	4970	30.2912401525173	9.46379573978107	-1.67840980370115	0.0250511226365075	Down	0.00836749328856953	NA	NA	NA	K08873//serine/threonine-protein kinase SMG1 [EC:2.7.11.1];K13415//protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1];K18577//mannosylglycoprotein endo-beta-mannosidase [EC:3.2.1.152]	gi|723681552|ref|XP_010317901.1|//PREDICTED: uncharacterized protein LOC101265105 isoform X2 [Solanum lycopersicum]
Solyc05g005330.3.1	6555	571.573137782195	173.762107407259	-1.71782461016458	1.66508904507608e-07	Down	1.6875566995534e-08	NA	NA	NA	K13453;K13457//disease resistance protein RPM1	gi|723696801|ref|XP_010320570.1|//PREDICTED: LOW QUALITY PROTEIN: putative late blight resistance protein homolog R1B-16 [Solanum lycopersicum]
Solyc09g059990.1.1	744	304.950047884796	35.4367060554082	-3.10525652989304	1.4633553162094e-06	Down	1.77328467757446e-07	NA	GO:0005488//binding	NA	NA	gi|460403197|ref|XP_004247081.1|//PREDICTED: uncharacterized protein LOC101254727 [Solanum lycopersicum]
Solyc05g013660.3.1	1557	277.236997682496	2076.69047613396	2.905094498071	8.41069951821954e-09	Up	6.85947910610719e-10	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K03252//translation initiation factor 3 subunit C;K19995//secretory carrier-associated membrane protein	gi|460386907|ref|XP_004239135.1|//PREDICTED: uncharacterized protein LOC101244185 isoform X1 [Solanum lycopersicum]
Solyc04g025160.3.1	1884	2136.3252653285	965.226796644257	-1.14619144734296	0.0243211003476106	Down	0.0080860293340345	NA	GO:0032559//adenyl ribonucleotide binding;GO:0003824//catalytic activity	GO:0030003//cellular cation homeostasis	K01551//arsenite-transporting ATPase [EC:3.6.3.16]	gi|970024816|ref|XP_015073715.1|//PREDICTED: ATPase ASNA1 homolog isoform X1 [Solanum pennellii]
Solyc07g062950.3.1	2048	864.104806322629	217.409120712539	-1.99079384055226	7.61924801862377e-05	Down	1.29420430970883e-05	NA	NA	NA	NA	gi|460397372|ref|XP_004244241.1|//PREDICTED: uncharacterized protein LOC101258771 [Solanum lycopersicum]
Solyc05g015310.3.1	2229	627.620768660376	140.098723009104	-2.16344928770326	0.000380457289456916	Down	7.60687677294952e-05	NA	NA	NA	K06949//ribosome biogenesis GTPase [EC:3.6.1.-]	gi|460387057|ref|XP_004239207.1|//PREDICTED: uncharacterized protein LOC101267706 [Solanum lycopersicum]
Solyc04g078820.3.1	1519	840.304137146233	2086.96400971595	1.31242222881246	0.000112301571375354	Up	1.98750507264866e-05	NA	GO:0046872//metal ion binding;GO:0005543//phospholipid binding	NA	K17095//annexin A7/11	gi|460384911|ref|XP_004238150.1|//PREDICTED: annexin D5 [Solanum lycopersicum]
Solyc10g084660.2.1	1381	31.8021533753878	12.4583131302928	-1.35201571699522	0.0403755687965208	Down	0.0145305694323247	GO:0044464//cell part	GO:0008092//cytoskeletal protein binding	NA	K05765//cofilin	gi|460408187|ref|XP_004249528.1|//PREDICTED: actin-depolymerizing factor 1-like [Solanum lycopersicum]
Solyc07g021463.1.1	1549	50.9033701836869	14.6501981881481	-1.79684099507681	0.0017639465241735	Down	0.000415672801767739	NA	NA	NA	K07466//replication factor A1	gi|970058390|ref|XP_015055892.1|//PREDICTED: uncharacterized protein LOC107002396 isoform X1 [Solanum pennellii];gi|970058394|ref|XP_015055894.1|//PREDICTED: replication protein A 70 kDa DNA-binding subunit B-like isoform X2 [Solanum pennellii]
Solyc09g098540.3.1	3677	8242.78459054424	2993.184654587	-1.46145050941227	8.59104345143899e-05	Down	1.47944761986164e-05	NA	GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds	GO:0006026//aminoglycan catabolic process	K00434//L-ascorbate peroxidase [EC:1.11.1.11];K20547	gi|460405025|ref|XP_004247978.1|//PREDICTED: chitinase-like protein 1 [Solanum lycopersicum]
Solyc08g015770.3.1	2934	22.2853228192941	75.0625234760179	1.75199893242448	0.0120318051456681	Up	0.00359635624955689	NA	NA	NA	K10639//E3 ubiquitin-protein ligase CCNP1IP1 [EC:2.3.2.27]	gi|723720726|ref|XP_010324727.1|//PREDICTED: E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X2 [Solanum lycopersicum];gi|460398474|ref|XP_004244784.1|//PREDICTED: E3 ubiquitin-protein ligase CCNB1IP1 homolog isoform X1 [Solanum lycopersicum]
Solyc06g009780.3.1	4209	272.487994164697	116.430364431503	-1.22672531141577	0.0309869832072496	Down	0.0106943669865784	NA	NA	NA	K10406//kinesin family member C2/C3	gi|460389882|ref|XP_004240576.1|//PREDICTED: kinesin-4-like [Solanum lycopersicum]
Solyc04g049660.2.1	818	197.460286194455	474.524167000945	1.26491904070349	0.000564895462748172	Up	0.000118019944412685	NA	NA	NA	NA	gi|723692774|ref|XP_010319854.1|//PREDICTED: uncharacterized protein LOC101255088 isoform X1 [Solanum lycopersicum]
Solyc01g107790.2.1	1220	41.5848703542143	118.795296829493	1.51434708082225	0.0440459946232334	Up	0.0161158298502184	NA	NA	NA	K02984//small subunit ribosomal protein S3Ae;K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|460371120|ref|XP_004231393.1|//PREDICTED: uncharacterized protein At4g06744 [Solanum lycopersicum]
Solyc10g005090.3.1	2544	41.7051830537026	11.970284843194	-1.80076920779757	0.00561641601664897	Down	0.00152406100347415	NA	NA	NA	K15271//ATP-dependent DNA helicase HFM1/MER3 [EC:3.6.4.12];K17710//pentatricopeptide repeat domain-containing protein 1	gi|460406112|ref|XP_004248517.1|//PREDICTED: putative pentatricopeptide repeat-containing protein At5g08490 [Solanum lycopersicum]
Solyc03g114340.3.1	1954	7476.85045767698	1685.2334028783	-2.14948226156418	1.95267543265235e-14	Down	6.85634507812179e-16	NA	GO:0043169//cation binding;GO:0016616//oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	GO:0006721//terpenoid metabolic process	K00099//1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]	gi|920500046|ref|NP_001234553.2|//1-deoxy-D-xylulose-5-phosphate reductoisomerase [Solanum lycopersicum]
Solyc04g063240.3.1	1375	3710.7381559995	247.888557646159	-3.90394261816876	7.2144773221498e-13	Down	3.14631670900375e-14	NA	NA	GO:0009658//chloroplast organization	K18213//proteinaceous RNase P [EC:3.1.26.5]	gi|460383997|ref|XP_004237702.1|//PREDICTED: protein STAY-GREEN LIKE, chloroplastic [Solanum lycopersicum]
Solyc03g083550.1.1	1221	135.683348121263	66.1646525156185	-1.03611108586555	0.00448626007805338	Down	0.00118428809711131	GO:0044464//cell part	GO:0016857//racemase and epimerase activity, acting on carbohydrates and derivatives;GO:0048037//cofactor binding	GO:0006139//nucleobase-containing compound metabolic process	K08679//UDP-glucuronate 4-epimerase [EC:5.1.3.6]	gi|460378363|ref|XP_004234942.1|//PREDICTED: UDP-glucuronate 4-epimerase 2-like [Solanum lycopersicum]
Solyc05g013720.3.1	2464	1003.20997532634	495.070134043059	-1.01891877465043	0.0326994736934599	Down	0.0113902110356859	NA	NA	NA	K07407//alpha-galactosidase [EC:3.2.1.22]	gi|460386921|ref|XP_004239142.1|//PREDICTED: uncharacterized protein LOC101245945 isoform X2 [Solanum lycopersicum];gi|460386919|ref|XP_004239141.1|//PREDICTED: uncharacterized protein LOC101245945 isoform X1 [Solanum lycopersicum]
Solyc04g016220.3.1	1389	3133.01233520039	82.9915973361692	-5.23844136455689	3.87102671974194e-38	Down	1.41404733313967e-40	NA	NA	NA	K13495//cis-zeatin O-glucosyltransferase [EC:2.4.1.215]	gi|460381724|ref|XP_004236593.1|//PREDICTED: zeatin O-xylosyltransferase-like [Solanum lycopersicum]
Solyc02g093520.3.1	2935	1203.52736674576	5109.18625460648	2.08582458261156	9.24744513094828e-11	Up	5.55301703666233e-12	NA	GO:0008270//zinc ion binding	NA	K16280//E3 ubiquitin-protein ligase RGLG [EC:2.3.2.27]	gi|525343519|ref|NP_001266128.1|//E3 ubiquitin-protein ligase RGLG2-like [Solanum lycopersicum]
Solyc01g059965.1.1	1389	0.504661440082858	36.2790836961249	6.1676783496997	5.5699675054142e-06	Up	7.52198906818087e-07	GO:0043231//intracellular membrane-bounded organelle	GO:0008422//beta-glucosidase activity;GO:0043167//ion binding	GO:0006950//response to stress;GO:0044238//primary metabolic process	K19891//glucan endo-1,3-beta-glucosidase 1/2/3 [EC:3.2.1.39]	gi|350537435|ref|NP_001234805.1|//glucan endo-1,3-beta-glucosidase B precursor [Solanum lycopersicum]
Solyc04g049800.3.1	1617	442.844045368421	129.739718482651	-1.77117850654677	0.00352289714668691	Down	0.000903572956103795	NA	NA	NA	K09284//AP2-like factor, euAP2 lineage	gi|723692728|ref|XP_004237667.2|//PREDICTED: ethylene-responsive transcription factor RAP2-7-like [Solanum lycopersicum]
Solyc03g097630.3.1	1832	939.564079407185	2088.2439873307	1.15222682044397	0.000295670413455686	Up	5.7694744835266e-05	NA	NA	NA	K16675//palmitoyltransferase ZDHHC9/14/18 [EC:2.3.1.225]	gi|460379142|ref|XP_004235323.1|//PREDICTED: probable protein S-acyltransferase 7 isoform X1 [Solanum lycopersicum]
Solyc04g054370.1.1	498	870.93716020236	124.492046192198	-2.80651505802216	4.12367359040872e-09	Down	3.21249359026175e-10	NA	NA	NA	K16282//E3 ubiquitin-protein ligase RHA2 [EC:2.3.2.27]	gi|460383440|ref|XP_004237431.1|//PREDICTED: probable E3 ubiquitin-protein ligase XERICO [Solanum lycopersicum]
Solyc08g081990.3.1	7549	1269.98829358448	462.796515115579	-1.45636529265602	1.48709498699962e-06	Down	1.80537810222818e-07	NA	NA	NA	K16240//protein suppressor of PHYA-105 1	gi|460400031|ref|XP_004245539.1|//PREDICTED: protein SPA1-RELATED 2 [Solanum lycopersicum]
Solyc02g083170.3.1	3784	91.1325779411082	186.539140083636	1.03343958806517	0.0232172081011279	Up	0.00765800933677058	NA	NA	NA	NA	gi|460373464|ref|XP_004232539.1|//PREDICTED: F-box protein SKIP23 [Solanum lycopersicum]
Solyc05g005873.1.1	740	5152.18289417699	1742.34904999277	-1.56415013540673	0.000738622254487312	Down	0.000158885829381477	GO:0030529//intracellular ribonucleoprotein complex	GO:0005198//structural molecule activity;GO:0003676//nucleic acid binding	GO:0010467//gene expression	K02952//small subunit ribosomal protein S13	gi|460386014|ref|XP_004238695.1|//PREDICTED: 30S ribosomal protein S13, chloroplastic [Solanum lycopersicum]
Solyc01g094180.3.1	1216	32.5885572994595	10.9132621317255	-1.57828307663616	0.0287592106122854	Down	0.00980222982849031	NA	NA	NA	NA	gi|969997323|ref|XP_015067302.1|//PREDICTED: uncharacterized protein LOC107012086 [Solanum pennellii]
Solyc03g078090.3.1	1953	92.0599391564899	244.736388796546	1.41058323127972	0.04005319245533	Up	0.0143951424502122	NA	NA	NA	K01051//pectinesterase [EC:3.1.1.11]	gi|723682738|ref|XP_010318096.1|//PREDICTED: probable pectinesterase/pectinesterase inhibitor 51 [Solanum lycopersicum]
Solyc06g066230.3.1	2595	0.390766393394843	12.8568676691478	5.04008899178952	0.000576062414330234	Up	0.000120718014513366	NA	NA	NA	K07418;K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30];K15472//premnaspirodiene oxygenase [EC:1.14.13.121]	gi|723709426|ref|XP_004242219.2|//PREDICTED: cytochrome P450 71D7-like [Solanum lycopersicum]
Solyc08g077760.3.1	819	321.558372017651	2451.87428376813	2.93073245212318	4.31816740585964e-06	Up	5.6769704936883e-07	NA	NA	NA	NA	NA
Solyc07g065610.1.1	2001	43.7523537891322	9.70658087245104	-2.17232552991553	0.00973849200634572	Down	0.00283827601750474	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723717991|ref|XP_010324250.1|//PREDICTED: probable L-type lectin-domain containing receptor kinase S.7 [Solanum lycopersicum]
Solyc01g005590.2.1	418	507.406343080446	42.6906679048995	-3.57114891547118	5.69462903872387e-09	Down	4.54670322086869e-10	NA	NA	NA	NA	NA
Solyc03g044150.3.1	2862	1936.43516889729	375.479449892748	-2.36659734543731	0.000276534345719916	Down	5.3620533265059e-05	NA	GO:0004175//endopeptidase activity;GO:0005515//protein binding	GO:0044092//negative regulation of molecular function;GO:0019538//protein metabolic process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K11262//acetyl-CoA carboxylase / biotin carboxylase 1 [EC:6.4.1.2 6.3.4.14];K13199//plasminogen activator inhibitor 1 RNA-binding protein;K01183//chitinase [EC:3.2.1.14]	gi|460377760|ref|XP_004234656.1|//PREDICTED: subtilisin-like protease [Solanum lycopersicum]
Solyc12g056350.2.1	2551	419.685337748616	131.547585867058	-1.67372328896426	0.000297758697965873	Down	5.8191026294732e-05	NA	NA	NA	NA	gi|460414465|ref|XP_004252591.1|//PREDICTED: uncharacterized protein LOC101266005 [Solanum lycopersicum]
Solyc06g066590.3.1	1094	13.3116945685738	679.779794961054	5.67430133937861	1.55182797765626e-17	Up	3.77718678026517e-19	NA	NA	NA	K14006//protein transport protein SEC23	gi|460392270|ref|XP_004241740.1|//PREDICTED: protein PLANT CADMIUM RESISTANCE 8 isoform X1 [Solanum lycopersicum];gi|723709323|ref|XP_010322692.1|//PREDICTED: protein PLANT CADMIUM RESISTANCE 8 isoform X2 [Solanum lycopersicum]
Solyc07g007690.3.1	2868	491.20382902485	172.102099703228	-1.51305710797912	0.000149303763760237	Down	2.72417594903221e-05	GO:0031224//intrinsic component of membrane	GO:0005254//chloride channel activity	GO:0015698//inorganic anion transport	K05016//chloride channel 7	gi|723712671|ref|XP_004242745.2|//PREDICTED: putative chloride channel-like protein CLC-g [Solanum lycopersicum];gi|698582946|ref|XP_009777968.1|//PREDICTED: putative chloride channel-like protein CLC-g isoform X1 [Nicotiana sylvestris]
Solyc11g069500.2.1	2850	360.906928098665	167.124315723285	-1.11070518465676	0.000205372075677993	Down	3.87579699999134e-05	NA	NA	NA	K14486//auxin response factor	gi|936976483|ref|NP_001234796.2|//auxin response factor 10 [Solanum lycopersicum]
Solyc03g119340.3.1	3556	87.2672229055821	280.325225957588	1.68358978342632	3.8082952375449e-07	Up	4.11803506937444e-08	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004702//receptor signaling protein serine/threonine kinase activity	GO:0006464//cellular protein modification process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|970014608|ref|XP_015068299.1|//PREDICTED: putative receptor-like protein kinase At4g00960 [Solanum pennellii]
Solyc04g082950.3.1	2398	363.422504264939	69.3832658911408	-2.38898810313077	2.22571993904645e-05	Down	3.40727291995817e-06	NA	NA	NA	NA	gi|460385565|ref|XP_004238474.1|//PREDICTED: uncharacterized protein LOC101247215 [Solanum lycopersicum]
Solyc10g049710.2.1	1576	9938.89751675747	4823.63790623615	-1.04296421492278	0.0151104791425596	Down	0.00466865817849548	NA	NA	NA	K01358//ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	gi|460406631|ref|XP_004248765.1|//PREDICTED: ATP-dependent Clp protease proteolytic subunit-related protein 1, chloroplastic [Solanum lycopersicum]
Solyc03g116690.3.1	768	123.918520348034	1901.04136071925	3.93932619294158	4.02774160105983e-12	Up	1.95622010816347e-13	NA	NA	NA	K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6];K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460380431|ref|XP_004235960.1|//PREDICTED: cucumber peeling cupredoxin-like [Solanum lycopersicum]
Solyc02g085520.3.1	4113	2546.88327908542	717.985578024499	-1.82670607352871	4.72973680137597e-09	Down	3.72695079696914e-10	GO:0009536//plastid	GO:0016879//ligase activity, forming carbon-nitrogen bonds;GO:0046872//metal ion binding;GO:0032561//guanyl ribonucleotide binding	GO:0006163//purine nucleotide metabolic process	K01939//adenylosuccinate synthase [EC:6.3.4.4]	gi|460373155|ref|XP_004232388.1|//PREDICTED: adenylosuccinate synthetase, chloroplastic [Solanum lycopersicum];gi|970011289|ref|XP_015066552.1|//PREDICTED: adenylosuccinate synthetase, chloroplastic [Solanum pennellii]
Solyc07g063540.3.1	1044	706.8539152407	258.180200330924	-1.45303372000831	0.00553408534180489	Down	0.00149841940967909	NA	NA	NA	NA	gi|460397273|ref|XP_004244192.1|//PREDICTED: uncharacterized protein LOC101244601 [Solanum lycopersicum]
Solyc06g071805.1.1	5056	3820.3545682706	1264.93406713334	-1.59464435296301	0.00273813136086144	Down	0.000679735905148993	GO:0005829//cytosol	GO:0004674//protein serine/threonine kinase activity;GO:0005524//ATP binding	GO:0006468//protein phosphorylation;GO:0035556//intracellular signal transduction	K02358//elongation factor Tu;K08867//WNK lysine deficient protein kinase [EC:2.7.11.1]	gi|565361357|ref|XP_006347423.1|//PREDICTED: probable serine/threonine-protein kinase WNK3 isoform X2 [Solanum tuberosum];gi|460391791|ref|XP_004241502.1|//PREDICTED: probable serine/threonine-protein kinase WNK3 [Solanum lycopersicum]
Solyc02g083490.3.1	1081	18.8668127557866	1.58512954236316	-3.57317807101624	0.00513886700880187	Down	0.001376277003811	NA	NA	NA	K00430//peroxidase [EC:1.11.1.7]	gi|460373414|ref|XP_004232514.1|//PREDICTED: peroxidase 64-like isoform X1 [Solanum lycopersicum]
Solyc02g092730.3.1	4582	342.212123032835	134.538981700157	-1.34686662507413	1.83317764078984e-05	Down	2.75099641487248e-06	GO:0005743//mitochondrial inner membrane	GO:0009055//electron carrier activity;GO:0051537//2 iron, 2 sulfur cluster binding;GO:0046872//metal ion binding;GO:0000104//succinate dehydrogenase activity;GO:0051539//4 iron, 4 sulfur cluster binding;GO:0008177//succinate dehydrogenase (ubiquinone) activity;GO:0051538//3 iron, 4 sulfur cluster binding;GO:0051540//metal cluster binding	GO:0006099//tricarboxylic acid cycle;GO:0009060//aerobic respiration	K00235//succinate dehydrogenase (ubiquinone) iron-sulfur subunit [EC:1.3.5.1]	gi|460372154|ref|XP_004231897.1|//PREDICTED: probable membrane-associated kinase regulator 1 [Solanum lycopersicum]
Solyc05g006040.3.1	1574	99.0859923389491	11.8530464107425	-3.06342321880886	7.96519279908525e-06	Down	1.11396314977515e-06	NA	NA	NA	NA	gi|723697017|ref|XP_010320611.1|//PREDICTED: uncharacterized protein LOC104647252 [Solanum lycopersicum]
Solyc07g043130.3.1	2014	3093.47454015781	102.813049413506	-4.91113286689448	9.85596343330098e-23	Down	1.40337633499365e-24	NA	NA	NA	K10523//speckle-type POZ protein	gi|460396173|ref|XP_004243653.1|//PREDICTED: root phototropism protein 2 [Solanum lycopersicum]
Solyc06g066520.1.1	447	24.3465811528383	53.7289437269469	1.14198027860595	0.0302399420111505	Up	0.0103948391690335	NA	NA	NA	K03350//anaphase-promoting complex subunit 3	gi|460392286|ref|XP_004241748.1|//PREDICTED: uncharacterized protein LOC101252785 [Solanum lycopersicum]
Solyc09g064500.3.1	851	5438.0203899459	618.150247769779	-3.13705211306146	5.36567954417076e-16	Down	1.54202285990594e-17	GO:0009523//photosystem II	NA	GO:0044237//cellular metabolic process	K08903//photosystem II 13kDa protein	gi|460403300|ref|XP_004247130.1|//PREDICTED: photosystem II reaction center Psb28 protein [Solanum lycopersicum]
Solyc06g084470.3.1	559	325.315659532407	101.958189433963	-1.67386261080255	8.19853041772043e-05	Down	1.40329699113509e-05	NA	NA	NA	NA	gi|460393444|ref|XP_004242319.1|//PREDICTED: uncharacterized protein LOC101248403 [Solanum lycopersicum]
Solyc04g055110.3.1	2630	170.799255402736	76.6016901100003	-1.1568535568825	0.00865871734225098	Down	0.00248387836089025	NA	NA	NA	K09571//FK506-binding protein 4/5 [EC:5.2.1.8]	gi|460383367|ref|XP_004237397.1|//PREDICTED: uncharacterized protein LOC101261016 [Solanum lycopersicum]
Solyc01g097960.3.1	2368	5.56579167719447	0.426881618170049	-3.70467896529481	0.0291105989277453	Down	0.00994044270080045	NA	NA	NA	NA	gi|460368555|ref|XP_004230131.1|//PREDICTED: late embryogenesis abundant protein D-34 [Solanum lycopersicum]
Solyc04g081580.3.1	2823	1194.46559344169	2697.14219238397	1.17506628436157	3.88457769090368e-05	Up	6.22476498180815e-06	NA	GO:0000166//nucleotide binding;GO:0017111//nucleoside-triphosphatase activity	NA	K13181//ATP-dependent RNA helicase DDX27 [EC:3.6.4.13]	gi|970025557|ref|XP_015074090.1|//PREDICTED: DEAD-box ATP-dependent RNA helicase 28 [Solanum pennellii]
Solyc06g068970.3.1	1199	3039.90774601501	210.970134664847	-3.84891685412861	1.78117059523043e-30	Down	1.27473070778382e-32	GO:0044464//cell part;GO:0016021//integral component of membrane;GO:0005737//cytoplasm	GO:0016627//oxidoreductase activity, acting on the CH-CH group of donors	GO:0055114//oxidation-reduction process;GO:0006629//lipid metabolic process	NA	gi|971582998|ref|XP_006365409.2|//PREDICTED: uncharacterized protein LOC102586921 [Solanum tuberosum];gi|460392099|ref|XP_004241655.1|//PREDICTED: uncharacterized protein LOC101250128 [Solanum lycopersicum]
Solyc01g073820.3.1	948	80.0182056669252	1628.21135003693	4.34681589265392	1.01077176407334e-07	Up	9.84097155121354e-09	NA	NA	NA	K17609//nucleoredoxin [EC:1.8.1.8];K16219//protein N-terminal methyltransferase [EC:2.1.1.244];K20393//PRA1 family protein 3	gi|723659523|ref|XP_004229343.2|//PREDICTED: uncharacterized protein LOC101249296 [Solanum lycopersicum]
Solyc02g078460.3.1	1986	343.181352715221	146.786430985115	-1.22525255306447	0.0169679774786374	Down	0.00531530053416092	NA	GO:0046914//transition metal ion binding	NA	NA	gi|460374115|ref|XP_004232857.1|//PREDICTED: E3 ubiquitin-protein ligase RNF8 isoform X2 [Solanum lycopersicum]
BGI_novel_G000496	700	9.04942110292451	34.9365640170039	1.94884031716903	0.00823448875204959	Up	0.00234587724732128	NA	NA	NA	NA	NA
Solyc11g070070.2.1	2081	41.1183019068137	183.310244926308	2.15643482730601	2.44002585025761e-08	Up	2.12551826899211e-09	NA	GO:0005488//binding	NA	K18753//butyrate response factor 1;K15308//tristetraprolin	gi|460411579|ref|XP_004251186.1|//PREDICTED: zinc finger CCCH domain-containing protein 39-like [Solanum lycopersicum]
Solyc06g050500.2.1	965	60.5046650832584	683.618970093074	3.49807414393846	2.09312218232501e-10	Up	1.33180243224571e-11	GO:0005634//nucleus;GO:0016021//integral component of membrane;GO:0005737//cytoplasm	GO:0010427//abscisic acid binding;GO:0004864//protein phosphatase inhibitor activity;GO:0004872//receptor activity	GO:0080163//regulation of protein serine/threonine phosphatase activity;GO:0009738//abscisic acid-activated signaling pathway;GO:0043086//negative regulation of catalytic activity	K14496//abscisic acid receptor PYR/PYL family	gi|460390986|ref|XP_004241105.1|//PREDICTED: abscisic acid receptor PYL4-like [Solanum lycopersicum]
Solyc11g068680.2.1	1904	771.285479217094	132.35009749297	-2.5429056923542	0.000100960817026583	Down	1.76301686418493e-05	NA	NA	NA	K02116//ATP synthase protein I	gi|460411354|ref|XP_004251077.1|//PREDICTED: uncharacterized protein LOC101265893 [Solanum lycopersicum];gi|970059537|ref|XP_015056513.1|//PREDICTED: uncharacterized protein LOC107002842 [Solanum pennellii]
Solyc03g097110.3.1	1938	711.56252426605	2455.84817931687	1.78715894040861	5.78983651862717e-08	Up	5.40827878175029e-09	NA	GO:0003824//catalytic activity;GO:0005488//binding	GO:0008152//metabolic process	NA	gi|460379138|ref|XP_004235321.1|//PREDICTED: uncharacterized protein LOC101259417 [Solanum lycopersicum]
Solyc12g035190.2.1	1787	184.307727339877	52.0576576050247	-1.8239342565221	0.000694060919785024	Down	0.000148110137385167	NA	GO:0016763//transferase activity, transferring pentosyl groups	GO:0006568//tryptophan metabolic process	K00766//anthranilate phosphoribosyltransferase [EC:2.4.2.18]	gi|970064471|ref|XP_015059203.1|//PREDICTED: anthranilate phosphoribosyltransferase, chloroplastic-like isoform X1 [Solanum pennellii]
Solyc02g037530.3.1	4258	746.247928078688	140.336276075144	-2.41076703573701	3.39309899337689e-05	Down	5.39293801541638e-06	GO:0043231//intracellular membrane-bounded organelle	GO:0005515//protein binding;GO:0003676//nucleic acid binding	GO:0006351//transcription, DNA-templated;GO:0009755//hormone-mediated signaling pathway	K14486//auxin response factor	gi|460371620|ref|XP_004231633.1|//PREDICTED: auxin response factor 8 [Solanum lycopersicum]
Solyc10g080890.2.1	1721	60.8239045067034	148.983246432335	1.29243976858891	0.00911029560708075	Up	0.00263073878291541	NA	GO:0004312//fatty acid synthase activity	GO:0008152//metabolic process	K00059//3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100];K10256//omega-6 fatty acid desaturase / acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.6 1.14.19.22]	gi|460407760|ref|XP_004249318.1|//PREDICTED: D-erythrulose reductase-like [Solanum lycopersicum]
Solyc03g123660.3.1	985	360.494916778731	1301.82986156553	1.85249009072097	0.000253148561509188	Up	4.86802381402229e-05	NA	GO:0016879//ligase activity, forming carbon-nitrogen bonds	GO:0006464//cellular protein modification process	K04554//ubiquitin-conjugating enzyme E2 J2 [EC:2.3.2.23]	gi|927028853|ref|NP_001234557.2|//ubiquitin conjugating enzyme 2 [Solanum lycopersicum]
Solyc01g107860.3.1	892	621.310119527562	5749.99256030218	3.2101746320723	3.92164575954662e-08	Up	3.55210943629726e-09	NA	NA	NA	NA	gi|460369837|ref|XP_004230763.1|//PREDICTED: CBS domain-containing protein CBSX1, chloroplastic [Solanum lycopersicum]
Solyc12g017960.1.1	264	435.176978974665	2309.25479829966	2.40775322120905	0.000194441406461097	Up	3.64994380102163e-05	NA	NA	NA	NA	gi|971560436|ref|XP_015166693.1|//PREDICTED: uncharacterized protein LOC107061619 [Solanum tuberosum]
Solyc11g068730.2.1	1619	2701.21954249495	371.840243104506	-2.86085607793576	3.34569170340356e-12	Down	1.60874545153966e-13	GO:0016020//membrane	GO:0000257//nitrilase activity	GO:0008152//metabolic process	K13035//beta-cyano-L-alanine hydratase/nitrilase [EC:3.5.5.4 4.2.1.65]	gi|460411360|ref|XP_004251080.1|//PREDICTED: bifunctional nitrilase/nitrile hydratase NIT4B [Solanum lycopersicum]
Solyc05g046085.1.1	921	6.20720003287304	0.35957086216686	-4.10959461700049	0.0105999017731837	Down	0.00312015149481259	NA	NA	NA	NA	NA
Solyc09g042770.3.1	1493	1718.61363276887	510.902900237832	-1.75012421360357	1.58221664154947e-06	Down	1.93336877797107e-07	NA	NA	NA	K17525//chitinase domain-containing protein 1	gi|460402982|ref|XP_004246985.1|//PREDICTED: rhodanese-like domain-containing protein 4A, chloroplastic [Solanum lycopersicum]
Solyc12g037930.2.1	656	450.587452910567	167.020782703205	-1.43177950967993	0.00574920095953795	Down	0.0015659344882677	NA	NA	NA	NA	gi|723750338|ref|XP_010314201.1|//PREDICTED: uncharacterized protein LOC101259918 [Solanum lycopersicum]
Solyc00g180440.2.1	365	30.247365379749	6.72813995010497	-2.16852986545479	0.00296596984192822	Down	0.000742487455583342	GO:0030529//intracellular ribonucleoprotein complex;GO:0009536//plastid	GO:0003723//RNA binding	GO:0009987//cellular process	K02887//large subunit ribosomal protein L20	gi|478733665|gb|AGJ51276.1|//ribosomal protein L20 (chloroplast) [Solanum carolinense]
Solyc03g063730.3.1	1991	860.904210027605	380.100059864331	-1.17947347021346	0.0187521249686045	Down	0.00597204993781709	GO:0044464//cell part	GO:0015291//secondary active transmembrane transporter activity	GO:0015893//drug transport	K03327//multidrug resistance protein, MATE family	gi|723681682|ref|XP_010317921.1|//PREDICTED: protein TRANSPARENT TESTA 12 isoform X1 [Solanum lycopersicum]
Solyc02g087860.3.1	279	28.7701817410814	0.482950169254179	-5.89655618475444	2.03900611815549e-05	Down	3.09863871467122e-06	NA	NA	NA	NA	gi|350537357|ref|NP_001234290.1|//transcription factor style2.1 [Solanum lycopersicum]
Solyc11g010960.2.1	1698	1558.89493859716	261.729360896142	-2.57437602053898	0.000144035002785495	Down	2.61569454887033e-05	NA	GO:0046914//transition metal ion binding;GO:0003824//catalytic activity	GO:0008152//metabolic process	K00083//cinnamyl-alcohol dehydrogenase [EC:1.1.1.195]	gi|460409485|ref|XP_004250169.1|//PREDICTED: 8-hydroxygeraniol dehydrogenase-like [Solanum lycopersicum]
Solyc12g006520.2.1	2604	464.124822781946	87.5580393734337	-2.40620130449012	2.36145968343353e-19	Down	4.70918790307491e-21	NA	GO:0016853//isomerase activity;GO:0016866//intramolecular transferase activity	NA	K15813//beta-amyrin synthase [EC:5.4.99.39]	gi|350538403|ref|NP_001234597.1|//delta-amyrin synthase [Solanum lycopersicum];gi|697118135|ref|XP_009612988.1|//PREDICTED: beta-amyrin synthase [Nicotiana tomentosiformis]
Solyc10g080370.1.1	198	257.687581706148	856.427475867634	1.73270806738794	0.000422991756599671	Up	8.55979665491133e-05	NA	NA	NA	NA	NA
Solyc06g073137.1.1	1473	65.7812767675244	173.754912216126	1.40130484953309	0.00109010419030041	Up	0.000244367325200039	NA	NA	NA	NA	gi|723707955|ref|XP_010322483.1|//PREDICTED: uncharacterized protein LOC101256296 isoform X3 [Solanum lycopersicum];gi|723707952|ref|XP_010322482.1|//PREDICTED: uncharacterized protein LOC101256296 isoform X2 [Solanum lycopersicum]
Solyc03g033630.3.1	4346	1073.88195845459	2353.72086168381	1.13210781443633	2.80400600463986e-05	Up	4.37198341934119e-06	NA	NA	NA	K01062//platelet-activating factor acetylhydrolase [EC:3.1.1.47]	gi|723680192|ref|XP_010317699.1|//PREDICTED: zinc finger CCCH domain-containing protein 44 [Solanum lycopersicum]
Solyc06g084120.3.1	2163	91.4641068241295	21.5622825591569	-2.08469579069815	0.0149167291976735	Down	0.00459878735626799	NA	NA	NA	K13464//jasmonate ZIM domain-containing protein;K17505//protein phosphatase 1K [EC:3.1.3.16]	gi|723711222|ref|XP_010323052.1|//PREDICTED: protein TIFY 4B-like [Solanum lycopersicum];gi|970032913|ref|XP_015077765.1|//PREDICTED: protein TIFY 4B-like isoform X2 [Solanum pennellii]
Solyc06g065990.1.1	672	6710.2293999197	339.569812325904	-4.30458197364058	2.02947837815668e-24	Down	2.43585819951711e-26	GO:0044425//membrane part;GO:0009579//thylakoid;GO:0009507//chloroplast	GO:0000166//nucleotide binding	GO:0006818//hydrogen transport	K02109//F-type H+-transporting ATPase subunit b	gi|460392352|ref|XP_004241780.1|//PREDICTED: ATP synthase subunit b', chloroplastic [Solanum lycopersicum]
Solyc07g056280.3.1	1233	134.557053484266	640.592735648366	2.25118941890364	0.000390451546881556	Up	7.82998852774255e-05	NA	NA	NA	K18835//WRKY transcription factor 2;K13424//WRKY transcription factor 33;K18834//WRKY transcription factor 1	gi|525314395|ref|NP_001266266.1|//probable WRKY transcription factor 71-like [Solanum lycopersicum]
Solyc06g050840.3.1	977	543.013211293597	50.8688399795766	-3.41613319838742	3.62734440783791e-09	Down	2.80014547063975e-10	NA	NA	NA	NA	gi|460390575|ref|XP_004240904.1|//PREDICTED: transcription factor bHLH61 [Solanum lycopersicum]
Solyc01g086957.1.1	1189	289.219213016785	116.453504932913	-1.31240933323571	0.0217854981542653	Down	0.00711187538523391	NA	NA	NA	K10398//kinesin family member 11	gi|460367499|ref|XP_004229611.1|//PREDICTED: uncharacterized protein At5g08430 [Solanum lycopersicum]
Solyc09g009770.3.1	2136	1216.94295226094	3600.30209912548	1.56485642817171	4.46345155613616e-06	Up	5.88959986160803e-07	NA	NA	NA	K06892//feruloyl-CoA ortho-hydroxylase [EC:1.14.11.-]	gi|460402036|ref|XP_004246521.1|//PREDICTED: uncharacterized protein LOC101256319 [Solanum lycopersicum]
Solyc02g071030.2.1	798	15967.4002928738	769.175225274342	-4.37567333653813	3.37653481020555e-28	Down	2.71854599300879e-30	GO:0031224//intrinsic component of membrane;GO:0009521//photosystem;GO:0009534//chloroplast thylakoid	GO:0043169//cation binding;GO:0046906//tetrapyrrole binding	GO:0006464//cellular protein modification process;GO:0006091//generation of precursor metabolites and energy	K08912//light-harvesting complex II chlorophyll a/b binding protein 1	gi|970007787|ref|XP_015064801.1|//PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like [Solanum pennellii]
Solyc01g005370.3.1	519	25.1987754132286	133.165897686879	2.40179914168675	4.55769129634179e-08	Up	4.16899300776158e-09	NA	NA	NA	K13448//calcium-binding protein CML	gi|460365645|ref|XP_004228711.1|//PREDICTED: probable calcium-binding protein CML25 [Solanum lycopersicum]
Solyc04g009640.3.1	3444	143.562677768838	1375.86659897899	3.26058795310231	2.42672985997262e-06	Up	3.06914209590245e-07	NA	NA	NA	K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|723689626|ref|XP_004237164.2|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Solanum lycopersicum]
Solyc06g074630.3.1	2342	418.974915666405	177.724283115675	-1.23722305579754	0.00211218232883914	Down	0.000507418186572545	NA	NA	NA	K13680//beta-mannan synthase [EC:2.4.1.32]	gi|460391385|ref|XP_004241301.1|//PREDICTED: glucomannan 4-beta-mannosyltransferase 2-like [Solanum lycopersicum];gi|698496305|ref|XP_009794211.1|//PREDICTED: glucomannan 4-beta-mannosyltransferase 2-like [Nicotiana sylvestris]
Solyc04g071470.3.1	2895	277.50175249229	85.6565247194635	-1.69586183236669	7.85607563340379e-07	Down	8.98406144449189e-08	NA	NA	NA	NA	gi|460384184|ref|XP_004237793.1|//PREDICTED: uncharacterized protein LOC101268567 isoform X1 [Solanum lycopersicum];gi|723693852|ref|XP_010320088.1|//PREDICTED: uncharacterized protein LOC101268567 isoform X2 [Solanum lycopersicum]
Solyc12g096190.2.1	2076	1543.01555105203	754.372274443369	-1.03240404345449	0.0332279662417258	Down	0.0115953563424421	NA	GO:0016836//hydro-lyase activity;GO:0048037//cofactor binding	GO:0006568//tryptophan metabolic process	K06001//tryptophan synthase beta chain [EC:4.2.1.20]	gi|460415462|ref|XP_004253077.1|//PREDICTED: tryptophan synthase beta chain 1 [Solanum lycopersicum]
Solyc11g010210.1.1	2027	19.8708613234781	111.006258348915	2.48191470142786	3.06870480609513e-07	Up	3.25538015437109e-08	NA	NA	NA	K11498//centromeric protein E;K20283//golgin subfamily A member 4;K10400//kinesin family member 15;K20478//golgin subfamily B member 1	gi|460410189|ref|XP_004250513.1|//PREDICTED: putative WEB family protein At1g65010, chloroplastic [Solanum lycopersicum]
Solyc03g033790.3.1	2484	193.109629933747	659.516937353831	1.77198960048795	0.00710231519128476	Up	0.00199054375739042	NA	NA	NA	K08900//mitochondrial chaperone BCS1	gi|460377537|ref|XP_004234548.1|//PREDICTED: probable mitochondrial chaperone BCS1-A [Solanum lycopersicum]
Solyc10g079950.2.1	1846	47.3831548281587	139.732261309562	1.56021898458073	0.0155346038190088	Up	0.00481359630041077	NA	NA	NA	K13495//cis-zeatin O-glucosyltransferase [EC:2.4.1.215]	gi|460407622|ref|XP_004249250.1|//PREDICTED: zeatin O-xylosyltransferase-like isoform X1 [Solanum lycopersicum];gi|723738402|ref|XP_010312120.1|//PREDICTED: zeatin O-xylosyltransferase-like isoform X4 [Solanum lycopersicum]
Solyc07g020790.3.1	2319	625.288048145378	159.692279390658	-1.96922637685268	2.08993788573773e-11	Down	1.13112785525987e-12	GO:0031224//intrinsic component of membrane;GO:0016021//integral component of membrane	GO:0022857//transmembrane transporter activity;GO:0022891//substrate-specific transmembrane transporter activity	GO:0055085//transmembrane transport;GO:0071702//organic substance transport	K08150//MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13	gi|661893499|emb|CDP03308.1|//unnamed protein product [Coffea canephora];gi|652698178|ref|NP_001280598.1|//probable plastidic glucose transporter 2-like [Solanum lycopersicum]
Solyc07g006910.3.1	2265	274.856152150759	56.4088549675294	-2.28468321445486	4.23353766597491e-08	Down	3.86143829903109e-09	NA	NA	NA	K15285//solute carrier family 35, member E3	gi|460394200|ref|XP_004242692.1|//PREDICTED: uncharacterized membrane protein At1g06890 isoform X1 [Solanum lycopersicum];gi|747047905|ref|XP_011069939.1|//PREDICTED: uncharacterized membrane protein At1g06890-like [Sesamum indicum]
Solyc10g084800.2.1	1922	1331.30243850737	4054.66615478541	1.60674478092006	0.0015071442569712	Up	0.000349202650265879	NA	NA	NA	K20174//oxysterol-binding protein-related protein 1/2	gi|460408206|ref|XP_004249537.1|//PREDICTED: oxysterol-binding protein-related protein 3A-like [Solanum lycopersicum]
BGI_novel_G000330	3057	69.3751745267961	158.963238070128	1.19620176474905	0.042921471397908	Up	0.015629187941187	NA	NA	NA	NA	gi|970045439|ref|XP_015084164.1|//PREDICTED: uncharacterized protein LOC107027531 [Solanum pennellii]
Solyc02g086730.2.1	1127	15896.205325705	4640.88651097945	-1.77621008946152	8.32910250399967e-05	Down	1.42875092155235e-05	GO:0030529//intracellular ribonucleoprotein complex;GO:0009536//plastid	NA	NA	K02935//large subunit ribosomal protein L7/L12	gi|723671728|ref|XP_010316288.1|//PREDICTED: 50S ribosomal protein L12, chloroplastic [Solanum lycopersicum];gi|970011201|ref|XP_015066505.1|//PREDICTED: 50S ribosomal protein L12, chloroplastic [Solanum pennellii]
Solyc01g080490.2.1	837	6.13728634860839	0.385631418646529	-3.99230639463106	0.0147604791863112	Down	0.00454346343821969	NA	NA	NA	K08145//MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8	gi|460367230|ref|XP_004229478.1|//PREDICTED: uncharacterized protein LOC101268223 [Solanum lycopersicum]
Solyc07g052310.1.1	180	57.4552259384372	10.1559670567884	-2.5001105012439	0.0310049228669837	Down	0.0107028697879505	NA	NA	NA	NA	NA
Solyc12g056620.2.1	483	445.089558841433	13.3664837919373	-5.057403754797	2.64383046255451e-26	Down	2.65092587754273e-28	NA	NA	NA	NA	gi|460414420|ref|XP_004252569.1|//PREDICTED: uncharacterized protein LOC101259223 [Solanum lycopersicum]
Solyc02g062650.3.1	2405	29.0963845550225	6.96819720798846	-2.06198253898816	0.0238894755040858	Down	0.00791715098802843	GO:0048046//apoplast	GO:0052716//hydroquinone:oxygen oxidoreductase activity;GO:0005507//copper ion binding	GO:0046274//lignin catabolic process;GO:0055114//oxidation-reduction process	K05909//laccase [EC:1.10.3.2]	gi|460376373|ref|XP_004233973.1|//PREDICTED: laccase-11 [Solanum lycopersicum];gi|698495316|ref|XP_009793780.1|//PREDICTED: laccase-11-like [Nicotiana sylvestris]
Solyc05g056270.3.1	1812	706.997760220545	341.287454466597	-1.05071826180308	0.0130190083595554	Down	0.00393608084107478	NA	NA	NA	K01637//isocitrate lyase [EC:4.1.3.1]	gi|970030865|ref|XP_015076717.1|//PREDICTED: 2,3-dimethylmalate lyase-like isoform X1 [Solanum pennellii]
BGI_novel_G000352	5588	206.13401823152	699.823387105016	1.76340826617623	0.000247768071708969	Up	4.75439851333596e-05	NA	NA	NA	NA	gi|460400215|ref|XP_004245631.1|//PREDICTED: uncharacterized protein LOC101265850 [Solanum lycopersicum]
Solyc11g007850.2.1	5711	677.604363646613	331.458625316833	-1.03161436978881	0.000972793849762318	Down	0.000215749344195832	NA	NA	NA	NA	gi|460409184|ref|XP_004250019.1|//PREDICTED: uncharacterized protein LOC101259105 [Solanum lycopersicum]
Solyc09g091660.3.1	4737	4673.13773483556	49868.0315905756	3.41565179297645	7.81414506299819e-07	Up	8.92445969622277e-08	GO:0031224//intrinsic component of membrane	GO:0032559//adenyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity	GO:0009207//purine ribonucleoside triphosphate catabolic process;GO:0051234//establishment of localization	K05681//ATP-binding cassette, subfamily G (WHITE), member 2	gi|460404745|ref|XP_004247841.1|//PREDICTED: pleiotropic drug resistance protein 1 [Solanum lycopersicum]
Solyc03g112090.3.1	2030	68.0659053941109	313.744959562003	2.20458805179195	0.00120303205042267	Up	0.000272014030783656	NA	GO:0003824//catalytic activity	NA	K01517//manganese-dependent ADP-ribose/CDP-alcohol diphosphatase [EC:3.6.1.13 3.6.1.16 3.6.1.53]	gi|460381067|ref|XP_004236274.1|//PREDICTED: manganese-dependent ADP-ribose/CDP-alcohol diphosphatase [Solanum lycopersicum]
Solyc06g008390.3.1	978	62.7463343117967	26.2323916326541	-1.25818183268322	0.0310099332833214	Down	0.0107057552583168	GO:0005829//cytosol	GO:0043531//ADP binding;GO:0032559//adenyl ribonucleotide binding;GO:0043522//leucine zipper domain binding	GO:0012501//programmed cell death;GO:0006952//defense response;GO:0006950//response to stress	NA	gi|350538941|ref|NP_001234622.1|//plant resistance protein [Solanum lycopersicum];gi|350537949|ref|NP_001234063.1|//root-knot nematode resistance protein [Solanum lycopersicum]
Solyc05g055850.3.1	1324	5213.80228677207	630.68899560923	-3.04733520919465	4.2521924680213e-14	Down	1.57388814699014e-15	NA	NA	NA	NA	gi|460388065|ref|XP_004239692.1|//PREDICTED: uncharacterized protein LOC101259047 [Solanum lycopersicum]
Solyc10g086180.2.1	2518	24572.1588732266	6637.37322736864	-1.88834031022539	0.0141398472504679	Down	0.00432185580191727	GO:0044424//intracellular part;GO:0005737//cytoplasm	GO:0016840//carbon-nitrogen lyase activity;GO:0045548//phenylalanine ammonia-lyase activity	GO:0006558//L-phenylalanine metabolic process;GO:0009800//cinnamic acid biosynthetic process;GO:0006559//L-phenylalanine catabolic process	K10775//phenylalanine ammonia-lyase [EC:4.3.1.24]	gi|460408248|ref|XP_004249558.1|//PREDICTED: phenylalanine ammonia-lyase [Solanum lycopersicum];gi|697142582|ref|XP_009625397.1|//PREDICTED: phenylalanine ammonia-lyase [Nicotiana tomentosiformis]
Solyc09g090190.3.1	2522	1832.21432893265	4155.07412566431	1.18128593759001	0.0232459480646359	Up	0.00767008842508412	NA	GO:0016741//transferase activity, transferring one-carbon groups	GO:0006730//one-carbon metabolic process	K16302//metal transporter CNNM;K15449//tRNA wybutosine-synthesizing protein 1 [EC:4.1.3.44]	gi|723732474|ref|XP_010326764.1|//PREDICTED: probable methyltransferase PMT3 [Solanum lycopersicum]
Solyc06g051990.3.1	1931	87.1084055667475	32.4320842261165	-1.42539019847979	0.0074968873307233	Down	0.00211621916488622	NA	NA	NA	NA	gi|723706338|ref|XP_010322214.1|//PREDICTED: protein DEFECTIVE IN MERISTEM SILENCING 3 isoform X3 [Solanum lycopersicum]
Solyc09g007940.3.1	1459	498.277914903609	131.007826525443	-1.92729762884795	0.0189901568608679	Down	0.00606130584462547	NA	GO:0019206//nucleoside kinase activity	GO:0043101//purine-containing compound salvage;GO:0006796//phosphate-containing compound metabolic process	K00856//adenosine kinase [EC:2.7.1.20]	gi|460402303|ref|XP_004246653.1|//PREDICTED: adenosine kinase 2-like [Solanum lycopersicum]
Solyc12g044850.2.1	4425	199.273841633082	520.45102784681	1.38501007637757	0.000229237918265394	Up	4.36037385160394e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460414023|ref|XP_004252374.1|//PREDICTED: inactive protein kinase SELMODRAFT_444075 [Solanum lycopersicum]
Solyc09g010993.1.1	1467	14.073548161507	2.42882515815772	-2.5346555556855	0.0428458869583609	Down	0.0155968738644458	GO:0048046//apoplast	GO:0016722//oxidoreductase activity, oxidizing metal ions;GO:0052716//hydroquinone:oxygen oxidoreductase activity;GO:0005507//copper ion binding	GO:0046274//lignin catabolic process;GO:0009809//lignin biosynthetic process;GO:0055114//oxidation-reduction process	K05909//laccase [EC:1.10.3.2]	gi|723727366|ref|XP_004246869.2|//PREDICTED: laccase-17-like [Solanum lycopersicum];gi|802551972|ref|XP_012064932.1|//PREDICTED: laccase-17 [Jatropha curcas]
Solyc02g092710.3.1	3109	536.445239326518	116.509600473668	-2.20298206839289	3.82446635048839e-05	Down	6.12273854754273e-06	NA	GO:0016705//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen;GO:0005488//binding	NA	K00472//prolyl 4-hydroxylase [EC:1.14.11.2]	gi|460372158|ref|XP_004231899.1|//PREDICTED: probable prolyl 4-hydroxylase 9 [Solanum lycopersicum]
Solyc08g078300.3.1	1798	629.328467676548	84.3752888087625	-2.898920764321	2.08589351820265e-07	Down	2.14902701815719e-08	NA	GO:0003677//DNA binding	GO:0006351//transcription, DNA-templated	K09338//homeobox-leucine zipper protein	gi|460400540|ref|XP_004245792.1|//PREDICTED: homeobox-leucine zipper protein HAT4-like [Solanum lycopersicum]
Solyc05g006660.3.1	2425	1287.31322635227	5829.75328513065	2.17907170013404	1.24482418563352e-05	Up	1.79615119374809e-06	NA	NA	NA	NA	gi|460386110|ref|XP_004238743.1|//PREDICTED: uncharacterized protein LOC101249264 [Solanum lycopersicum]
Solyc11g072110.2.1	1176	1501.70798971687	117.5368488705	-3.67541927420655	1.84025187716079e-26	Down	1.80403400810082e-28	NA	NA	NA	K06892//feruloyl-CoA ortho-hydroxylase [EC:1.14.11.-]	gi|460411691|ref|XP_004251239.1|//PREDICTED: feruloyl CoA ortho-hydroxylase 2-like [Solanum lycopersicum]
Solyc01g107660.3.1	787	5015.37490145894	1754.38852808172	-1.51538926355573	7.56415473869189e-06	Down	1.05267099937275e-06	NA	NA	NA	K07977//Arf/Sar family, other;K07937//ADP-ribosylation factor 1	gi|970004704|ref|XP_015063157.1|//PREDICTED: stress enhanced protein 1, chloroplastic [Solanum pennellii]
Solyc06g065820.3.1	1055	28.0995515539737	7.81240426882968	-1.84670859491535	0.0376881395521205	Down	0.0134088747586473	GO:0043231//intracellular membrane-bounded organelle	GO:0001071//nucleic acid binding transcription factor activity;GO:0003676//nucleic acid binding	GO:0003006//developmental process involved in reproduction;GO:0000160//phosphorelay signal transduction system;GO:0006950//response to stress;GO:0006351//transcription, DNA-templated	K13434//pathogenesis-related genes transcriptional activator PTI6;K09286//EREBP-like factor	gi|350539962|ref|NP_001234848.1|//ethylene response factor 3-like [Solanum lycopersicum]
BGI_novel_G000420	1329	3.32786510725344	71.8553611221204	4.43242693893185	3.93598036693897e-06	Up	5.15544767012954e-07	NA	NA	NA	NA	gi|255633684|gb|ACU17202.1|//unknown [Glycine max]
Solyc07g043500.1.1	1326	11391.9167065865	103.727551291263	-6.77906755049613	2.61094776944579e-12	Down	1.23306650659304e-13	NA	NA	NA	K13080//flavanone 7-O-glucoside 2''-O-beta-L-rhamnosyltransferase [EC:2.4.1.236];K18823//soyasaponin III rhamnosyltransferase [EC:2.4.1.273]	gi|460396139|ref|XP_004243636.1|//PREDICTED: crocetin glucoside glucosyltransferase-like [Solanum lycopersicum]
Solyc11g020217.1.1	1056	5.73308378356674	65.5570058172397	3.51536669586445	0.000190303817558016	Up	3.5625536257326e-05	NA	NA	NA	NA	gi|565353569|ref|XP_006343702.1|//PREDICTED: uncharacterized protein LOC102605937 [Solanum tuberosum]
Solyc07g014590.3.1	1577	571.123779572155	249.236100396237	-1.19629040509485	0.00135785283894396	Down	0.000311069164609721	NA	GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0043167//ion binding;GO:0016798//hydrolase activity, acting on glycosyl bonds	GO:0044238//primary metabolic process;GO:0005975//carbohydrate metabolic process	K01214//isoamylase [EC:3.2.1.68]	gi|723713238|ref|XP_010323372.1|//PREDICTED: isoamylase 1, chloroplastic isoform X1 [Solanum lycopersicum];gi|460394557|ref|XP_004242868.1|//PREDICTED: isoamylase 1, chloroplastic isoform X2 [Solanum lycopersicum]
Solyc02g085930.3.1	1633	41.4893388602983	11.1524613214573	-1.8953785231808	0.02211062616624	Down	0.00723779331265542	NA	NA	NA	K00430//peroxidase [EC:1.11.1.7]	gi|460375840|ref|XP_004233712.1|//PREDICTED: putative Peroxidase 48 [Solanum lycopersicum]
Solyc08g066740.3.1	4441	247.688985924574	41.4998535431503	-2.57735156699416	1.85380625652607e-05	Down	2.78817215039611e-06	NA	GO:0046914//transition metal ion binding	NA	K05925//mRNA (2'-O-methyladenosine-N6-)-methyltransferase [EC:2.1.1.62]	gi|460399289|ref|XP_004245174.1|//PREDICTED: stellacyanin [Solanum lycopersicum]
Solyc07g063730.2.1	3519	82.6551201063123	1767.16209647336	4.41818637917936	1.32835409491602e-11	Up	6.97153185344323e-13	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723719112|ref|XP_010324436.1|//PREDICTED: uncharacterized protein LOC101244686 [Solanum lycopersicum]
Solyc06g084280.1.1	480	0.700831115427765	6.55999388043618	3.22655573491007	0.0317223068814242	Up	0.0109954425111959	NA	NA	NA	NA	gi|460393864|ref|XP_004242528.1|//PREDICTED: protein FANTASTIC FOUR 3-like [Solanum lycopersicum]
Solyc10g083230.1.1	1176	21.98344509641	85.9253879502454	1.96666696694587	0.00123563011762432	Up	0.000279983430931797	NA	NA	NA	NA	gi|460407984|ref|XP_004249428.1|//PREDICTED: probable F-box protein At1g60180 [Solanum lycopersicum]
Solyc05g054530.1.1	906	199.96894511406	35.9504992103756	-2.47569225970709	0.00243029058230453	Down	0.000593893881675433	NA	NA	NA	NA	gi|460388260|ref|XP_004239786.1|//PREDICTED: uncharacterized protein LOC101263027 [Solanum lycopersicum]
Solyc05g016330.3.1	2428	1921.58577494193	802.648700661935	-1.25945677693411	5.16815595953889e-06	Down	6.93697987561486e-07	NA	GO:0005506//iron ion binding;GO:0016712//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen	GO:0008152//metabolic process	K15747//beta-ring hydroxylase [EC:1.14.-.-]	gi|460387155|ref|XP_004239253.1|//PREDICTED: cytochrome P450 97B2, chloroplastic isoform X1 [Solanum lycopersicum]
Solyc09g018900.2.1	1585	39.4501878143932	1.12172041202504	-5.13624713343114	1.24745245873204e-06	Down	1.49398566792382e-07	NA	NA	NA	NA	gi|460401479|ref|XP_004246251.1|//PREDICTED: uncharacterized protein LOC101248905 [Solanum lycopersicum]
Solyc09g089670.3.1	1053	853.334721515392	2056.68680145673	1.2691384561416	0.00378347152807669	Up	0.000978868192797835	NA	NA	NA	K11673//actin-related protein 8	gi|460404483|ref|XP_004247711.1|//PREDICTED: uncharacterized protein LOC101246566 [Solanum lycopersicum]
Solyc06g053220.3.1	1140	257.330132365137	1039.56853137616	2.01429256188151	4.59479631406131e-06	Up	6.09887791649483e-07	NA	NA	NA	K09338//homeobox-leucine zipper protein	gi|460390726|ref|XP_004240976.1|//PREDICTED: homeobox-leucine zipper protein ATHB-12-like [Solanum lycopersicum]
Solyc04g081400.3.1	1993	241.054192216511	76.455844441653	-1.65665882663578	0.00237971857582951	Down	0.000579938871655484	GO:0009532//plastid stroma	GO:0032559//adenyl ribonucleotide binding;GO:0016773//phosphotransferase activity, alcohol group as acceptor	GO:0006007//glucose catabolic process;GO:0006796//phosphate-containing compound metabolic process	K00844//hexokinase [EC:2.7.1.1]	gi|350539587|ref|NP_001234717.1|//plastidic hexokinase [Solanum lycopersicum]
BGI_novel_G000152	1511	155.615018630104	340.988274533374	1.13174082693447	0.0416333158589714	Up	0.0150670144503785	NA	NA	NA	NA	gi|970012892|ref|XP_015067397.1|//PREDICTED: uncharacterized protein LOC107012150 [Solanum pennellii]
Solyc11g069880.1.1	639	0.694614304467952	5.73791177489653	3.04624175952672	0.0492642556242674	Up	0.0183850353105026	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723745947|ref|XP_010313436.1|//PREDICTED: kiwellin-like [Solanum lycopersicum]
Solyc11g044360.2.1	1399	970.601203115045	155.05883581617	-2.64606291010408	0.00106472462524401	Down	0.000238162087225633	NA	NA	NA	K15032//mTERF domain-containing protein, mitochondrial	gi|460410656|ref|XP_004250738.1|//PREDICTED: uncharacterized protein LOC101248448 [Solanum lycopersicum]
Solyc02g071350.3.1	5258	20.5478324964674	106.07175766392	2.36798245661378	2.74747149834989e-05	Up	4.28178706373971e-06	NA	NA	NA	K05658//ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:3.6.3.44]	gi|723675530|ref|XP_004233862.2|//PREDICTED: ABC transporter B family member 9-like [Solanum lycopersicum]
Solyc10g006290.3.1	938	4565.28001480368	1460.65083625368	-1.64409200380146	7.42166019916619e-08	Down	7.08748077764417e-09	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|350539721|ref|NP_001234510.1|//constitutive plastid-lipid associated protein [Solanum lycopersicum]
Solyc01g073950.3.1	2339	992.981014741062	2836.34386690768	1.51419441013485	8.12779249180337e-07	Up	9.32205810991463e-08	NA	NA	NA	K11723//bromodomain-containing protein 7/9	gi|460366978|ref|XP_004229352.1|//PREDICTED: ankyrin repeat, bromo and BTB domain-containing protein DDB_G0293800 [Solanum lycopersicum]
Solyc06g008620.1.1	1983	285.908809736862	5388.84732627616	4.23634973402661	1.27867649390304e-10	Up	7.83086879186929e-12	NA	NA	NA	NA	gi|460389749|ref|XP_004240512.1|//PREDICTED: uncharacterized protein LOC101247825 [Solanum lycopersicum]
Solyc01g088250.3.1	2502	620.468317036415	149.205196395681	-2.05605976246035	6.9985041671967e-07	Down	7.90944708324899e-08	NA	NA	NA	K14411//RNA-binding protein Musashi	gi|460367658|ref|XP_004229688.1|//PREDICTED: protein IQ-DOMAIN 14 [Solanum lycopersicum]
Solyc07g063690.1.1	342	67.7173349008435	157.715986300797	1.21973180059359	0.0344650164069711	Up	0.0120809979980303	NA	GO:0046872//metal ion binding	NA	K16465//centrin-1	gi|460397242|ref|XP_004244177.1|//PREDICTED: calcium-binding protein PBP1 [Solanum lycopersicum]
Solyc08g078070.3.1	1303	895.140341059676	16973.1722917317	4.24499853267448	7.47305620316814e-28	Up	6.26747296001503e-30	NA	GO:0032561//guanyl ribonucleotide binding	GO:0006810//transport;GO:0035556//intracellular signal transduction	K07874//Ras-related protein Rab-1A	gi|915409580|ref|NP_001233823.2|//small GTP-binding protein [Solanum lycopersicum]
Solyc05g008060.3.1	2912	6868.04787971708	647.604768546818	-3.40671458306433	1.16778893555037e-17	Down	2.77713337140725e-19	GO:0031224//intrinsic component of membrane	NA	GO:0006810//transport	K13947//auxin efflux carrier family	gi|350535242|ref|NP_001234184.1|//auxin efflux facilitator SlPIN4 [Solanum lycopersicum]
Solyc03g117110.3.1	1383	668.495498487688	1595.27452727661	1.25481496491401	0.000220434867458792	Up	4.18471291176245e-05	NA	NA	NA	K17824//DCN1-like protein 4/5	gi|460380363|ref|XP_004235926.1|//PREDICTED: DCN1-like protein 4 isoform X1 [Solanum lycopersicum]
Solyc12g099870.2.1	2100	15.2955801349432	80.0277385111234	2.38738531408762	0.00182170481148062	Up	0.000431116887136219	NA	NA	NA	K19613//leucine-rich repeat protein SHOC2;K10406//kinesin family member C2/C3	gi|460415594|ref|XP_004253143.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Solanum lycopersicum]
Solyc05g053090.2.1	3190	430.637165345474	3044.04177286445	2.82144341771179	3.44643638317875e-13	Up	1.43365998346037e-14	GO:0005634//nucleus	GO:0043565//sequence-specific DNA binding;GO:0003700//transcription factor activity, sequence-specific DNA binding	GO:0006355//regulation of transcription, DNA-templated	K14494//DELLA protein	gi|460388498|ref|XP_004239904.1|//PREDICTED: scarecrow-like protein 14 [Solanum lycopersicum]
Solyc08g006150.3.1	1407	3051.36237291023	797.04854598315	-1.9367140188005	0.0415557849793442	Down	0.0150327602961285	NA	NA	NA	K07232//cation transport protein ChaC	gi|460397835|ref|XP_004244472.1|//PREDICTED: cation transport regulator-like protein 2 [Solanum lycopersicum]
Solyc01g005680.3.1	1240	26.051267445806	208.3398569126	2.99951339441879	4.46120467052748e-06	Up	5.88497216676486e-07	NA	NA	NA	K06966//uncharacterized protein	gi|460365627|ref|XP_004228702.1|//PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG8 [Solanum lycopersicum]
Solyc03g081310.3.1	1888	307.788345315033	921.279533562897	1.58170035984457	1.4511445238551e-05	Up	2.1338803429372e-06	NA	NA	NA	NA	gi|723682460|ref|XP_010318058.1|//PREDICTED: uncharacterized protein LOC101249438 isoform X2 [Solanum lycopersicum];gi|460378525|ref|XP_004235021.1|//PREDICTED: uncharacterized protein LOC101249438 isoform X1 [Solanum lycopersicum]
Solyc03g098740.1.1	600	200.816165261572	5173.05386969461	4.68706890228455	6.60620926034655e-19	Up	1.36911150616993e-20	NA	NA	NA	NA	gi|723684137|ref|XP_004235492.2|//PREDICTED: kunitz-type trypsin inhibitor alpha chain-like [Solanum lycopersicum]
Solyc09g082210.3.1	2079	515.70257707353	199.167500648112	-1.3725570015685	0.00224518989547368	Down	0.000542718669753496	NA	NA	NA	NA	gi|723731905|ref|XP_010326674.1|//PREDICTED: uncharacterized protein LOC101247367 [Solanum lycopersicum]
Solyc12g098880.2.1	316	21.9875926109566	0.410688736988181	-5.74250046167146	3.04534162484422e-05	Down	4.78346116262619e-06	NA	NA	NA	NA	gi|723753043|ref|XP_010314731.1|//PREDICTED: uncharacterized protein LOC101251166 [Solanum lycopersicum]
Solyc07g040990.3.1	2624	596.670917755622	1337.09867920856	1.16409857614059	0.0116291804451227	Up	0.0034599716085049	NA	NA	NA	K14497//protein phosphatase 2C [EC:3.1.3.16]	gi|723717013|ref|XP_010324031.1|//PREDICTED: probable protein phosphatase 2C 50 isoform X1 [Solanum lycopersicum];gi|460396347|ref|XP_004243737.1|//PREDICTED: probable protein phosphatase 2C 50 isoform X2 [Solanum lycopersicum]
Solyc01g008420.3.1	1715	68.4239626269808	3.39470711757981	-4.33314264240287	3.3998510777397e-10	Down	2.23927868434697e-11	NA	NA	NA	K20456//oxysterol-binding protein 1	gi|723655316|ref|XP_010315164.1|//PREDICTED: MATE efflux family protein 1-like [Solanum lycopersicum]
Solyc06g030570.3.1	2124	2654.89609610527	1135.89049969691	-1.22483163463808	1.7649625174344e-05	Down	2.63941763081364e-06	GO:0044424//intracellular part	GO:0008168//methyltransferase activity;GO:0051540//metal cluster binding	GO:0042254//ribosome biogenesis;GO:0009451//RNA modification	K06941//23S rRNA (adenine2503-C2)-methyltransferase [EC:2.1.1.192]	gi|723705382|ref|XP_010322023.1|//PREDICTED: uncharacterized protein LOC101253790 isoform X2 [Solanum lycopersicum];gi|460390298|ref|XP_004240772.1|//PREDICTED: uncharacterized protein LOC101253790 isoform X1 [Solanum lycopersicum]
Solyc03g123710.3.1	2129	870.024282628076	94.4004161259762	-3.20419054330685	2.855797793814e-06	Down	3.65863165995926e-07	NA	NA	NA	NA	gi|460379543|ref|XP_004235521.1|//PREDICTED: uncharacterized protein LOC101243687 isoform X2 [Solanum lycopersicum]
Solyc01g108280.3.1	2576	1149.46119982658	510.948637158799	-1.16970759115872	0.00261288632823646	Down	0.000644845697750619	GO:0005634//nucleus;GO:0005829//cytosol	GO:0005524//ATP binding;GO:0004674//protein serine/threonine kinase activity;GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity;GO:0019903//protein phosphatase binding	GO:0009414//response to water deprivation;GO:0035556//intracellular signal transduction;GO:0005985//sucrose metabolic process;GO:0042742//defense response to bacterium;GO:0009737//response to abscisic acid;GO:0046777//protein autophosphorylation;GO:1902456//regulation of stomatal opening;GO:0010359//regulation of anion channel activity;GO:0006464//cellular protein modification process;GO:0006636//unsaturated fatty acid biosynthetic process;GO:0009651//response to salt stress;GO:0040007//growth;GO:2000377//regulation of reactive oxygen species metabolic process;GO:0019432//triglyceride biosynthetic process;GO:0048366//leaf development	K14498//serine/threonine-protein kinase SRK2 [EC:2.7.11.1]	gi|460369899|ref|XP_004230794.1|//PREDICTED: serine/threonine-protein kinase SRK2E [Solanum lycopersicum]
Solyc02g071130.3.1	855	43.9379136691699	1313.65964375216	4.90198135878687	3.89669478658635e-16	Up	1.10387954294231e-17	NA	NA	NA	K08819//cyclin-dependent kinase 12/13 [EC:2.7.11.22 2.7.11.23];K13424//WRKY transcription factor 33	gi|460374433|ref|XP_004233015.1|//PREDICTED: probable WRKY transcription factor 71 [Solanum lycopersicum]
Solyc09g010940.3.1	1315	1880.64746600448	230.751709205263	-3.02681619669885	1.11326805624459e-06	Down	1.32124850569658e-07	NA	GO:0003824//catalytic activity	NA	K07025//putative hydrolase of the HAD superfamily	gi|460401831|ref|XP_004246419.1|//PREDICTED: uncharacterized protein LOC101251913 [Solanum lycopersicum]
Solyc11g007120.2.1	1251	598.944468905623	288.499736040985	-1.05385225094838	0.00215812764811655	Down	0.000519823351055954	GO:0043231//intracellular membrane-bounded organelle	GO:0046914//transition metal ion binding;GO:0051540//metal cluster binding	GO:0031163//metallo-sulfur cluster assembly	NA	gi|460409098|ref|XP_004249977.1|//PREDICTED: nifU-like protein 4, mitochondrial [Solanum lycopersicum]
Solyc03g113280.3.1	1180	1403.88090335362	114.729054901978	-3.61311784908419	2.04705244738574e-16	Down	5.61588862858173e-18	NA	NA	NA	NA	gi|460380890|ref|XP_004236186.1|//PREDICTED: uncharacterized protein LOC101244759 [Solanum lycopersicum]
Solyc01g090040.3.1	1606	64.8546187247955	226.790841459574	1.80608115374119	0.0175552994926195	Up	0.00553427849385409	NA	NA	NA	K11752//diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]	gi|969997509|ref|XP_015068289.1|//PREDICTED: bax inhibitor 1-like [Solanum pennellii]
Solyc04g077670.3.1	1925	369.095478686463	92.7509957768511	-1.99255938935535	3.60091324953419e-09	Down	2.77705737039147e-10	NA	NA	NA	K16296//serine carboxypeptidase-like clade I [EC:3.4.16.-]	gi|970022946|ref|XP_015072807.1|//PREDICTED: uncharacterized protein LOC107017038 [Solanum pennellii]
Solyc04g007470.3.1	2064	28.2627790612715	163.215380860873	2.52980178132184	6.18138318594603e-07	Up	6.92606152413664e-08	NA	NA	NA	K12135//zinc finger protein CONSTANS	gi|723690355|ref|XP_010319411.1|//PREDICTED: putative zinc finger protein At1g68190 isoform X1 [Solanum lycopersicum];gi|460382506|ref|XP_004236980.1|//PREDICTED: putative zinc finger protein At1g68190 isoform X2 [Solanum lycopersicum]
Solyc09g091240.3.1	1849	1821.49878588416	459.289392140516	-1.98765066523514	7.2091509345617e-10	Down	5.0142670508022e-11	GO:0031224//intrinsic component of membrane	NA	NA	NA	gi|460404688|ref|XP_004247813.1|//PREDICTED: GDT1-like protein 2, chloroplastic [Solanum lycopersicum]
Solyc01g109780.3.1	2573	1096.30814873929	538.703000779705	-1.02509135930516	0.000594690491545559	Down	0.000125192463235777	NA	NA	NA	NA	gi|460370122|ref|XP_004230903.1|//PREDICTED: uncharacterized protein LOC101251228 [Solanum lycopersicum]
Solyc06g068090.3.1	3478	2140.8965353306	20626.4354007692	3.26820754015397	1.75852823490821e-12	Up	8.12142717702131e-14	GO:0016020//membrane;GO:0043231//intracellular membrane-bounded organelle	GO:0004620//phospholipase activity;GO:0046872//metal ion binding	GO:0006650//glycerophospholipid metabolic process	K01115//phospholipase D1/2 [EC:3.1.4.4]	gi|927261925|ref|NP_001234102.2|//phospholipase PLDa1 [Solanum lycopersicum];gi|926458000|dbj|BAS29955.1|//phospholipase D alpha [Nicotiana benthamiana]
Solyc07g047780.3.1	2845	1138.97748502044	6089.19147396114	2.41851145049683	3.17831373872112e-12	Up	1.52352447740993e-13	NA	GO:0046914//transition metal ion binding	NA	NA	gi|460395979|ref|XP_004243557.1|//PREDICTED: OBERON-like protein [Solanum lycopersicum]
Solyc05g011970.3.1	1863	182.322979639866	1782.21005987442	3.28909907740314	0.0384933512860385	Up	0.0137340971563278	NA	GO:0005506//iron ion binding	NA	K15639//PHYB activation tagged suppressor 1 [EC:1.14.-.-]	gi|460386682|ref|XP_004239025.1|//PREDICTED: cytochrome P450 CYP749A22-like [Solanum lycopersicum]
Solyc11g012940.2.1	1079	416.896481045814	164.224996249137	-1.34401546205032	1.44824487061929e-05	Down	2.12853344448033e-06	NA	NA	NA	NA	gi|460409792|ref|XP_004250322.1|//PREDICTED: uncharacterized protein LOC101247487 [Solanum lycopersicum]
Solyc05g013070.3.1	2897	1806.39067657717	8128.30257641583	2.16984416251305	2.84202217178871e-08	Up	2.50006423342081e-09	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0007165//signal transduction;GO:0006464//cellular protein modification process	K06272//integrin-linked kinase [EC:2.7.11.1];K17535//serine/threonine-protein kinase TNNI3K [EC:2.7.11.1]	gi|460386843|ref|XP_004239105.1|//PREDICTED: serine/threonine-protein kinase HT1 [Solanum lycopersicum]
Solyc04g012180.3.1	1386	639.345857523276	1398.3849531272	1.12909308541338	6.45946403406161e-06	Up	8.83878502647985e-07	GO:0016020//membrane	GO:0032561//guanyl ribonucleotide binding;GO:0003824//catalytic activity	GO:0006810//transport;GO:0035556//intracellular signal transduction	K07904//Ras-related protein Rab-11A;K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|723689258|ref|XP_010319241.1|//PREDICTED: ras-related protein Rab11D-like [Solanum lycopersicum];gi|723688852|ref|XP_004236603.2|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Solanum lycopersicum];gi|971549558|ref|XP_015163992.1|//PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR [Solanum tuberosum];gi|971549373|ref|XP_015163930.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Solanum tuberosum]
Solyc03g007040.3.1	2175	350.519606210668	1544.85984528999	2.13990890975325	1.15512552573605e-12	Up	5.19240963257891e-14	GO:0031224//intrinsic component of membrane	GO:0015078//hydrogen ion transmembrane transporter activity	GO:0006811//ion transport	NA	gi|998613708|ref|NP_001307278.1|//K(+) efflux antiporter 5 [Solanum lycopersicum]
Solyc06g064810.3.1	1313	1081.87694177851	348.392541917682	-1.63475076354921	0.00199177297695482	Down	0.00047559630573925	NA	NA	NA	NA	gi|460392635|ref|XP_004241921.1|//PREDICTED: uncharacterized protein LOC101253499 [Solanum lycopersicum]
Solyc03g119050.3.1	4080	307.4084350304	631.374351680224	1.03833890332445	0.00221306535380708	Up	0.000534375926716948	NA	NA	NA	K09422//myb proto-oncogene protein, plant	gi|723685787|ref|XP_010318634.1|//PREDICTED: uncharacterized protein LOC101267796 [Solanum lycopersicum]
Solyc12g015630.2.1	571	1026.94801362187	59.5255377487307	-4.10871059212695	3.25722041398936e-25	Down	3.50878447757166e-27	NA	NA	NA	NA	gi|460413101|ref|XP_004251934.1|//PREDICTED: uncharacterized protein LOC101246694 [Solanum lycopersicum]
Solyc12g013970.2.1	2992	138.729405891605	40.9178161710255	-1.76147256808107	0.0121012245221452	Down	0.00362026345663998	NA	NA	NA	K04424//sterile alpha motif and leucine zipper containing kinase AZK [EC:2.7.11.25]	gi|971571372|ref|XP_015169676.1|//PREDICTED: serine/threonine-protein kinase EDR1 isoform X2 [Solanum tuberosum];gi|658015536|ref|XP_008343109.1|//PREDICTED: serine/threonine-protein kinase EDR1-like [Malus domestica];gi|723748554|ref|XP_010313901.1|//PREDICTED: serine/threonine-protein kinase EDR1 [Solanum lycopersicum]
Solyc02g085100.3.1	1254	8653.49383259576	1484.34356495084	-2.54345768027475	8.42272834612157e-13	Down	3.71720231169224e-14	NA	GO:0003824//catalytic activity;GO:0005488//binding	GO:0044238//primary metabolic process	K01792//glucose-6-phosphate 1-epimerase [EC:5.1.3.15]	gi|460373224|ref|XP_004232421.1|//PREDICTED: putative glucose-6-phosphate 1-epimerase [Solanum lycopersicum]
Solyc05g050800.3.1	1201	1393.45495902883	14715.4734203123	3.40059568109336	6.18618315049335e-25	Up	6.87148717327799e-27	NA	NA	NA	K00344//NADPH2:quinone reductase [EC:1.6.5.5]	gi|856116680|ref|NP_001297054.1|//phosphoglycerate mutase family protein [Solanum lycopersicum]
Solyc04g007290.3.1	2561	164.583413891031	11.4907331834412	-3.84027619425228	1.11959931923167e-09	Down	7.98759913899437e-11	NA	NA	NA	NA	gi|723690413|ref|XP_010319419.1|//PREDICTED: uncharacterized protein LOC101250495 isoform X2 [Solanum lycopersicum];gi|460382484|ref|XP_004236969.1|//PREDICTED: uncharacterized protein LOC101250495 isoform X1 [Solanum lycopersicum];gi|723690416|ref|XP_010319420.1|//PREDICTED: uncharacterized protein LOC101250495 isoform X3 [Solanum lycopersicum]
Solyc06g076790.1.1	321	2456.87439708234	103.515047201045	-4.56891170284254	2.72760550585465e-26	Down	2.75525977369394e-28	NA	NA	NA	NA	gi|460391130|ref|XP_004241176.1|//PREDICTED: uncharacterized protein LOC101259757 [Solanum lycopersicum]
Solyc09g011480.3.1	2832	436.263731487853	156.041639595945	-1.48326947858493	0.00175351780444138	Down	0.000412888473634121	NA	NA	NA	K10418//dynein light chain LC8-type;K20826	gi|460401771|ref|XP_004246389.1|//PREDICTED: rop guanine nucleotide exchange factor 7-like [Solanum lycopersicum]
Solyc01g008890.3.1	1883	731.876442145201	280.762385753847	-1.38225044029652	4.4130964884955e-05	Down	7.13254300511276e-06	GO:0005634//nucleus	GO:0003677//DNA binding;GO:0003700//transcription factor activity, sequence-specific DNA binding	GO:0006355//regulation of transcription, DNA-templated	K13434//pathogenesis-related genes transcriptional activator PTI6;K09286//EREBP-like factor	gi|723655167|ref|XP_010313907.1|//PREDICTED: ethylene-responsive transcription factor CRF6 isoform X1 [Solanum lycopersicum]
Solyc02g021050.3.1	1770	542.418763678317	127.070693900039	-2.09377574353855	5.5629406669914e-10	Down	3.78838996518313e-11	NA	NA	NA	NA	gi|460371401|ref|XP_004231527.1|//PREDICTED: uncharacterized protein LOC101255042 [Solanum lycopersicum]
Solyc01g108500.3.1	1114	2302.57349469455	16389.2368447935	2.83142956692512	3.04056500050865e-20	Up	5.45143792024997e-22	NA	GO:0003676//nucleic acid binding	NA	K03231//elongation factor 1-alpha	gi|568214389|ref|NP_001275480.1|//DNA binding protein ACBF-like [Solanum tuberosum]
Solyc02g087650.3.1	700	165.412317152245	57.9290782042068	-1.51370705295183	0.000557801966858658	Down	0.000116433987416449	NA	NA	NA	K13947//auxin efflux carrier family	gi|723671483|ref|XP_010316261.1|//PREDICTED: uncharacterized protein LOC101260389 [Solanum lycopersicum]
Solyc09g075850.3.1	2183	696.047214231417	1565.7704243105	1.16961562264283	5.02430329430876e-06	Up	6.73348987924163e-07	NA	NA	NA	K21248	gi|460403788|ref|XP_004247368.1|//PREDICTED: vacuole membrane protein 1 [Solanum lycopersicum]
Solyc07g051980.2.1	2431	1.23510535898908	15.3029340030835	3.63110226535805	0.0246896821073066	Up	0.00821915725735631	NA	NA	NA	K15083//DNA repair protein RAD16	gi|970040275|ref|XP_015081515.1|//PREDICTED: ATP-dependent helicase rhp16-like [Solanum pennellii]
Solyc12g009925.1.1	449	619.140025644366	33.2689534338982	-4.21801734031208	8.15839426525767e-05	Down	1.39581890851099e-05	NA	NA	NA	K13495//cis-zeatin O-glucosyltransferase [EC:2.4.1.215]	gi|460412717|ref|XP_004251744.1|//PREDICTED: zeatin O-glucosyltransferase-like [Solanum lycopersicum]
Solyc10g019170.2.1	2358	208.4326080079	821.65226185535	1.97894695226059	5.33724702962895e-05	Up	8.79925585658598e-06	NA	NA	NA	NA	gi|460400215|ref|XP_004245631.1|//PREDICTED: uncharacterized protein LOC101265850 [Solanum lycopersicum]
Solyc06g074510.3.1	1901	1252.49481999543	393.655851660747	-1.66979780777207	1.84368803794994e-09	Down	1.36070609629524e-10	NA	NA	NA	K15634//probable phosphoglycerate mutase [EC:5.4.2.12]	gi|460391395|ref|XP_004241306.1|//PREDICTED: probable 2-carboxy-D-arabinitol-1-phosphatase [Solanum lycopersicum]
Solyc10g074730.3.1	1758	14.600221450655	94.1941392380948	2.68964704658008	1.41753043535222e-05	Up	2.07611433180573e-06	NA	NA	NA	NA	gi|460407146|ref|XP_004249017.1|//PREDICTED: uncharacterized protein LOC101256532 [Solanum lycopersicum]
Solyc09g075060.3.1	1952	855.021986331497	105.105842932515	-3.02411864613391	3.02002554167354e-08	Down	2.67240966003168e-09	NA	NA	NA	K01188//beta-glucosidase [EC:3.2.1.21]	gi|460403900|ref|XP_004247424.1|//PREDICTED: beta-glucosidase 11-like [Solanum lycopersicum]
Solyc06g076140.3.1	650	21399.2473384202	7150.99419567039	-1.58134431714324	0.000376541477429486	Down	7.51454849469759e-05	NA	GO:0043169//cation binding	NA	NA	gi|350537383|ref|NP_001234291.1|//metallothionein-like protein type 2 [Solanum lycopersicum]
Solyc01g068580.3.1	1403	626.192062879465	1274.62191985959	1.02539224908185	0.000233677769091857	Up	4.45266421499021e-05	NA	NA	NA	NA	gi|460366570|ref|XP_004229154.1|//PREDICTED: uncharacterized protein C9orf78 [Solanum lycopersicum]
Solyc03g096790.3.1	2480	384.753864059	824.802822713944	1.10011345451206	0.000894810895887732	Up	0.000196853060516229	GO:1990316//ATG1/ULK1 kinase complex	NA	GO:0006914//autophagy	K08331//autophagy-related protein 13	gi|959241417|ref|NP_001304327.1|//autophagy-related protein 13 [Solanum lycopersicum]
Solyc05g053890.2.1	1680	325.560419493241	113.554724734725	-1.5195375780953	0.00419424818202222	Down	0.00109859035243291	NA	GO:0016757//transferase activity, transferring glycosyl groups	NA	K13496//UDP-glucosyl transferase 73C [EC:2.4.1.-]	gi|460389123|ref|XP_004240208.1|//PREDICTED: UDP-glycosyltransferase 73C6-like [Solanum lycopersicum]
Solyc06g071060.1.1	789	75.6018327872787	844.002573828613	3.48075428380542	4.90166743523345e-08	Up	4.5086766954939e-09	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K00059//3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]	gi|460391918|ref|XP_004241565.1|//PREDICTED: short-chain type dehydrogenase/reductase-like [Solanum lycopersicum]
Solyc02g072105.1.1	1537	569.844213841646	248.566654133226	-1.19693479571557	0.000458272105950905	Down	9.34719309588249e-05	NA	NA	NA	K01465//dihydroorotase [EC:3.5.2.3]	gi|723675277|ref|XP_010316845.1|//PREDICTED: dihydroorotase, mitochondrial isoform X1 [Solanum lycopersicum]
Solyc08g081140.3.1	1912	693.66494204495	143.611134867058	-2.27207135971527	8.47913812916892e-05	Down	1.45670000139181e-05	NA	GO:0046983//protein dimerization activity	NA	K13422//transcription factor MYC2	gi|460400153|ref|XP_004245600.1|//PREDICTED: transcription factor EGL1 [Solanum lycopersicum]
Solyc10g083890.2.1	2509	8.64179346424577	151.127369502935	4.12829039777425	5.36264155722578e-10	Up	3.6479874914034e-11	NA	GO:0016836//hydro-lyase activity;GO:0046914//transition metal ion binding	GO:0044237//cellular metabolic process	K01674//carbonic anhydrase [EC:4.2.1.1]	gi|460408076|ref|XP_004249474.1|//PREDICTED: alpha carbonic anhydrase 7-like [Solanum lycopersicum]
Solyc09g008730.3.1	1406	474.438166727831	165.052821482783	-1.52329227301513	5.56754263551082e-08	Down	5.18403216919116e-09	GO:0044464//cell part	GO:0032561//guanyl ribonucleotide binding	GO:0032506//cytokinetic process	K03978//GTP-binding protein	gi|460402168|ref|XP_004246586.1|//PREDICTED: GTP-binding protein At2g22870 [Solanum lycopersicum]
Solyc10g084940.2.1	3174	878.898382650386	3345.63763838321	1.92851292026377	1.68427166993959e-07	Up	1.70888157357074e-08	NA	NA	NA	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|723739513|ref|XP_010312294.1|//PREDICTED: protein NRT1/ PTR FAMILY 5.6-like [Solanum lycopersicum]
Solyc07g041160.3.1	1730	630.285992773617	1403.96344725192	1.1554268686733	0.0202220926776911	Up	0.00652084850733211	NA	NA	NA	NA	gi|460396331|ref|XP_004243729.1|//PREDICTED: uncharacterized membrane protein C776.05 [Solanum lycopersicum]
Solyc09g007810.3.1	3200	503.563246029718	175.243863610632	-1.5228090604744	0.00123611631385338	Down	0.000280139674527678	GO:0043231//intracellular membrane-bounded organelle	GO:0005515//protein binding;GO:0003676//nucleic acid binding	GO:0006351//transcription, DNA-templated;GO:0009755//hormone-mediated signaling pathway	K14486//auxin response factor	gi|460402311|ref|XP_004246657.1|//PREDICTED: auxin response factor 18-like isoform X1 [Solanum lycopersicum];gi|723728320|ref|XP_010325986.1|//PREDICTED: auxin response factor 18-like isoform X2 [Solanum lycopersicum]
Solyc12g096960.2.1	731	25.9399158430895	1344.39223307429	5.69563650364976	2.43054999987967e-24	Up	2.93535932593192e-26	NA	NA	GO:0006950//response to stress	NA	gi|460415348|ref|XP_004253021.1|//PREDICTED: pathogenesis-related protein STH-2-like [Solanum lycopersicum]
Solyc05g005060.3.1	1455	29.301544053359	467.065448285257	3.99457612902978	2.02668426552814e-11	Up	1.09311619659282e-12	NA	GO:0004713//protein tyrosine kinase activity;GO:0032559//adenyl ribonucleotide binding	GO:0006464//cellular protein modification process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460385910|ref|XP_004238643.1|//PREDICTED: cysteine-rich receptor-like protein kinase 3 [Solanum lycopersicum]
Solyc01g105710.3.1	1301	4506.02572941085	1450.13675669761	-1.63566658983215	0.000933505571047156	Down	0.000206339944696199	GO:0044424//intracellular part	GO:0016859//cis-trans isomerase activity	GO:0044267//cellular protein metabolic process	K01802//peptidylprolyl isomerase [EC:5.2.1.8]	gi|350538313|ref|NP_001233825.1|//CONSTANS interacting protein 3 [Solanum lycopersicum]
Solyc02g079780.1.1	978	357.473241833657	24.037266036399	-3.89449053452395	2.79633097067676e-17	Down	7.02522392364745e-19	NA	NA	NA	NA	gi|460373924|ref|XP_004232762.1|//PREDICTED: uncharacterized protein LOC101267957 [Solanum lycopersicum]
Solyc08g079800.3.1	952	54.6348590643146	9.755593712917	-2.4855201566246	0.0299388815509663	Down	0.010277959560325	NA	NA	NA	K20496;K15601//lysine-specific demethylase 3 [EC:1.14.11.-]	gi|460401241|ref|XP_004246135.1|//PREDICTED: growth-regulating factor 9-like [Solanum lycopersicum]
Solyc01g096260.3.1	1103	31.6349331492229	123.360639121612	1.96329169259973	0.0121347045180656	Up	0.00363073181625586	NA	NA	NA	NA	gi|460368312|ref|XP_004230011.1|//PREDICTED: uncharacterized protein LOC101261161 [Solanum lycopersicum]
Solyc05g053310.3.1	793	579.527029412896	242.88985230034	-1.25457373392553	9.46837085286069e-06	Down	1.34112901598593e-06	NA	NA	NA	NA	gi|460388458|ref|XP_004239884.1|//PREDICTED: probable protein Pop3 [Solanum lycopersicum]
Solyc03g120175.1.1	996	99.2456913025454	40.329372798969	-1.29917350062417	0.00857795050725228	Down	0.00245655262215668	NA	NA	NA	NA	gi|698478570|ref|XP_009786429.1|//PREDICTED: uncharacterized protein LOC104234552 [Nicotiana sylvestris]
Solyc03g044180.1.1	267	0.417508595641526	22.0488068542691	5.72275087788297	3.39809892391795e-05	Up	5.40215145016776e-06	NA	NA	NA	NA	gi|723680734|ref|XP_010317787.1|//PREDICTED: uncharacterized protein LOC104646212 [Solanum lycopersicum]
Solyc11g072140.2.1	3627	13.649033805519	454.958157399023	5.05886313276481	3.88721447504092e-10	Up	2.58345885231772e-11	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K06892//feruloyl-CoA ortho-hydroxylase [EC:1.14.11.-]	gi|723746306|ref|XP_004251441.2|//PREDICTED: wall-associated receptor kinase 3-like [Solanum lycopersicum]
Solyc03g115060.3.1	2949	229.921191070296	3847.5297972298	4.0647211538688	3.86861033396852e-34	Up	1.9899665502e-36	NA	NA	NA	NA	gi|460380619|ref|XP_004236052.1|//PREDICTED: uncharacterized protein LOC101255575 [Solanum lycopersicum]
Solyc11g066100.2.1	2067	323.104873970457	93.1940848505012	-1.79369222035315	0.00613773322193611	Down	0.00168680136593615	NA	GO:0032559//adenyl ribonucleotide binding	GO:0050896//response to stimulus	K03283//heat shock 70kDa protein 1/8	gi|970063808|ref|XP_015058852.1|//PREDICTED: heat shock cognate 70 kDa protein [Solanum pennellii]
Solyc08g077560.3.1	3054	321.287831569123	1783.03959682604	2.4724004955134	2.09719447082237e-05	Up	3.19722878547171e-06	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process	K00924	gi|460400640|ref|XP_004245841.1|//PREDICTED: probable receptor-like protein kinase At5g47070 [Solanum lycopersicum]
Solyc04g080000.1.1	771	134.157655698288	277.311466900764	1.04757788917289	0.0289104350220233	Up	0.00986239381696576	NA	NA	NA	K13352//peroxin-11B	gi|723695645|ref|XP_010320374.1|//PREDICTED: peroxisomal membrane protein 11A [Solanum lycopersicum]
Solyc04g079430.3.1	6569	1240.35652432558	4471.35292590358	1.84995655882746	1.00146851258763e-06	Up	1.17661724753101e-07	GO:0016020//membrane;GO:0044464//cell part;GO:0016021//integral component of membrane	GO:0005215//transporter activity	GO:0006810//transport;GO:0055085//transmembrane transport	K14611//solute carrier family 23 (nucleobase transporter), member 1/2	gi|698580020|ref|XP_009777178.1|//PREDICTED: nucleobase-ascorbate transporter 3 [Nicotiana sylvestris];gi|697143418|ref|XP_009625821.1|//PREDICTED: nucleobase-ascorbate transporter 3 [Nicotiana tomentosiformis];gi|460384990|ref|XP_004238189.1|//PREDICTED: probable disease resistance protein At4g33300 [Solanum lycopersicum]
Solyc04g007060.3.1	3024	510.96818155489	2564.08162626753	2.32713682900556	7.95837924912535e-08	Up	7.64156289911544e-09	NA	GO:0043531//ADP binding	GO:0006952//defense response	K13453;K13457//disease resistance protein RPM1	gi|460382460|ref|XP_004236957.1|//PREDICTED: putative late blight resistance protein homolog R1A-3 [Solanum lycopersicum]
Solyc04g082170.3.1	1344	1.04052138177364	7.13082009052664	2.7767613940343	0.0495778672624361	Up	0.0185371845277135	NA	GO:0016616//oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;GO:0046914//transition metal ion binding	GO:0008152//metabolic process	K00121//S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]	gi|460385435|ref|XP_004238409.1|//PREDICTED: alcohol dehydrogenase-like 7 [Solanum lycopersicum]
Solyc02g064640.3.1	2404	498.603829178291	141.794181342937	-1.81409563103348	0.000134951571995203	Down	2.43715657640061e-05	GO:0005622//intracellular;GO:0009536//plastid	GO:0032559//adenyl ribonucleotide binding;GO:0016301//kinase activity;GO:0005525//GTP binding	GO:0006790//sulfur compound metabolic process;GO:0008652//cellular amino acid biosynthetic process;GO:0007264//small GTPase mediated signal transduction;GO:0006796//phosphate-containing compound metabolic process	K07955//ADP-ribosylation factor-like protein 8;K00860//adenylylsulfate kinase [EC:2.7.1.25]	gi|460375333|ref|XP_004233461.1|//PREDICTED: ADP-ribosylation factor-like protein 8A [Solanum lycopersicum];gi|460375329|ref|XP_004233459.1|//PREDICTED: adenylyl-sulfate kinase 3-like [Solanum lycopersicum]
Solyc11g066860.2.1	1158	432.603550737977	173.343108312383	-1.31941502700813	0.00789439665323748	Down	0.00224108114324797	NA	NA	NA	NA	gi|460411223|ref|XP_004251013.1|//PREDICTED: uncharacterized protein LOC101246792 [Solanum lycopersicum]
Solyc10g079720.2.1	1889	770.988436064619	268.771499006109	-1.52032906119049	1.05795995968593e-07	Down	1.03674397421139e-08	GO:0009536//plastid;GO:0009507//chloroplast	GO:0004121//cystathionine beta-lyase activity;GO:0016846//carbon-sulfur lyase activity;GO:0048037//cofactor binding;GO:0030170//pyridoxal phosphate binding	GO:0071265//L-methionine biosynthetic process;GO:0071266//'de novo' L-methionine biosynthetic process	K01760//cystathionine beta-lyase [EC:4.4.1.8]	gi|460407544|ref|XP_004249212.1|//PREDICTED: cystathionine beta-lyase, chloroplastic [Solanum lycopersicum]
Solyc02g063360.3.1	1296	42.6082978950508	198.175243015231	2.21757042013911	0.000157268399768929	Up	2.89118737013701e-05	NA	NA	NA	K12486//stromal membrane-associated protein;K01537//Ca2+-transporting ATPase [EC:3.6.3.8]	gi|460375360|ref|XP_004233474.1|//PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD11 [Solanum lycopersicum]
BGI_novel_G000429	606	2.04090928543223	16.1425017756074	2.98358022194039	0.00373796553816912	Up	0.000966119466291363	NA	NA	NA	NA	gi|723740706|ref|XP_010312506.1|//PREDICTED: CASP-like protein 4D1 [Solanum lycopersicum]
Solyc09g075330.3.1	1950	7.80047367658555	333.667504483646	5.41870564766737	8.00579564980548e-14	Up	3.06170655162532e-15	NA	NA	NA	K01051//pectinesterase [EC:3.1.1.11]	gi|460403854|ref|XP_004247401.1|//PREDICTED: probable pectinesterase/pectinesterase inhibitor 7 [Solanum lycopersicum]
Solyc06g082950.3.1	931	13790.6987353867	2250.23706492329	-2.61554665189426	7.21217331372777e-07	Down	8.16705774828723e-08	GO:0009522//photosystem I	NA	GO:0044237//cellular metabolic process	K02699//photosystem I subunit XI	gi|460393734|ref|XP_004242464.1|//PREDICTED: photosystem I reaction center subunit XI, chloroplastic [Solanum lycopersicum];gi|460393736|ref|XP_004242465.1|//PREDICTED: photosystem I reaction center subunit XI, chloroplastic [Solanum lycopersicum]
Solyc11g005350.2.1	1550	71.5657318291381	495.304820746152	2.79097581743945	7.35918436328195e-05	Up	1.24646390885467e-05	NA	NA	NA	K00801//farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]	gi|723740407|ref|XP_010312462.1|//PREDICTED: WAT1-related protein At1g68170 [Solanum lycopersicum]
Solyc07g007300.3.1	1660	2082.25663924113	148.414615187631	-3.81044281850024	2.73869681917911e-18	Down	6.03313635058467e-20	NA	GO:0016741//transferase activity, transferring one-carbon groups	GO:0006730//one-carbon metabolic process	K00559//sterol 24-C-methyltransferase [EC:2.1.1.41];K06185//ATP-binding cassette, subfamily F, member 2;K08242//24-methylenesterol C-methyltransferase [EC:2.1.1.143];K03183//demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]	gi|460394252|ref|XP_004242718.1|//PREDICTED: uncharacterized methyltransferase At2g41040, chloroplastic-like [Solanum lycopersicum]
Solyc03g059200.2.1	1847	0.778823774355337	8.57825307552926	3.46131504945849	0.021264291484003	Up	0.00691715639559022	NA	NA	NA	K09422//myb proto-oncogene protein, plant	gi|460378214|ref|XP_004234868.1|//PREDICTED: myb-related protein 308 [Solanum lycopersicum]
Solyc11g062350.2.1	1010	274.156301866762	47.8619379630279	-2.5180479174895	2.99093235603066e-06	Down	3.84959349387724e-07	NA	NA	NA	K11886//proteasome component ECM29	gi|460410957|ref|XP_004250881.1|//PREDICTED: blue copper protein-like [Solanum lycopersicum]
Solyc03g119370.2.1	1081	4.95428957086071	744.138477130891	7.2307491135609	3.69580916565659e-46	Up	7.30124816534216e-49	GO:0043231//intracellular membrane-bounded organelle	GO:0003676//nucleic acid binding	NA	K09422//myb proto-oncogene protein, plant	gi|723685676|ref|XP_004236420.2|//PREDICTED: transcription factor MYB108-like [Solanum lycopersicum]
Solyc10g080670.2.1	1174	1067.50370984314	6337.91034174734	2.56976616742422	0.000510829065306495	Up	0.00010542942204421	NA	NA	NA	NA	gi|460407723|ref|XP_004249300.1|//PREDICTED: uncharacterized protein LOC101267365 [Solanum lycopersicum]
Solyc11g071760.3.1	597	61.7424063574572	2756.43365733762	5.48039735655615	4.2519501047006e-09	Up	3.32510486046737e-10	NA	GO:0046872//metal ion binding	NA	K13448//calcium-binding protein CML	gi|350537863|ref|NP_001234570.1|//regulator of gene silencing [Solanum lycopersicum]
Solyc08g061090.3.1	1837	734.914686552327	301.565671968805	-1.28510457059726	2.24211184600497e-06	Down	2.81141503278691e-07	GO:0031224//intrinsic component of membrane;GO:0019866//organelle inner membrane	NA	GO:0006810//transport	K14684//solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41	gi|460398992|ref|XP_004245030.1|//PREDICTED: adenine nucleotide transporter BT1, chloroplastic/mitochondrial [Solanum lycopersicum]
Solyc08g076840.3.1	1422	2258.82228844773	710.178006045529	-1.66931818556522	1.31446131814629e-08	Down	1.10436700876015e-09	GO:0032991//macromolecular complex	GO:0005488//binding	NA	K13126//polyadenylate-binding protein	gi|460400764|ref|XP_004245902.1|//PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Solanum lycopersicum]
Solyc12g049390.2.1	2062	703.338216898357	349.073904831039	-1.01068609871823	0.0057724210537918	Down	0.0015745704961849	GO:0031224//intrinsic component of membrane	NA	NA	NA	gi|460414077|ref|XP_004252401.1|//PREDICTED: transmembrane protein 87A-like [Solanum lycopersicum]
Solyc02g090540.3.1	2935	93.2547567957479	42.0491335727027	-1.14910124322977	0.0376600639092396	Down	0.0133960783467226	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K04708//3-dehydrosphinganine reductase [EC:1.1.1.102]	gi|460372456|ref|XP_004232046.1|//PREDICTED: 3-ketodihydrosphingosine reductase isoform X1 [Solanum lycopersicum]
Solyc02g077060.2.1	480	32.5861223443975	233.236591914304	2.8394645563576	0.000685060293719989	Up	0.000145979648637279	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K07195//exocyst complex component 7	gi|723675040|ref|XP_010316804.1|//PREDICTED: uncharacterized protein LOC104645842 [Solanum lycopersicum]
Solyc06g009380.3.1	1643	999.340202645545	4235.34667370776	2.08343226312	6.74146943342595e-08	Up	6.38514754373614e-09	NA	NA	NA	NA	gi|460389852|ref|XP_004240562.1|//PREDICTED: uncharacterized protein LOC101264013 [Solanum lycopersicum]
Solyc12g011330.3.1	3100	446.901361284417	1659.96528535046	1.89312472660882	3.37833897517588e-07	Up	3.61784996111537e-08	GO:0043231//intracellular membrane-bounded organelle;GO:0031224//intrinsic component of membrane;GO:0031090//organelle membrane	GO:0043169//cation binding;GO:0032559//adenyl ribonucleotide binding;GO:0004871//signal transducer activity;GO:0004673//protein histidine kinase activity	GO:0000160//phosphorelay signal transduction system;GO:0006468//protein phosphorylation;GO:0006351//transcription, DNA-templated	K14509//ethylene receptor [EC:2.7.13.-]	gi|350534600|ref|NP_001234149.1|//ethylene receptor 1 [Solanum lycopersicum];gi|697122447|ref|XP_009615214.1|//PREDICTED: ethylene receptor 1 [Nicotiana tomentosiformis]
Solyc01g109950.3.1	2622	82.8055829392733	2.91201078795227	-4.82964043543407	3.58208311303599e-07	Down	3.86007241679851e-08	NA	GO:0000166//nucleotide binding;GO:0004672//protein kinase activity	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460370071|ref|XP_004230878.1|//PREDICTED: probable receptor-like protein kinase At4g39110 [Solanum lycopersicum]
Solyc07g055190.3.1	1216	24.1913338250598	101.843527322468	2.07379207080821	4.23577718442122e-05	Up	6.82858816259944e-06	NA	GO:0016209//antioxidant activity;GO:0005506//iron ion binding;GO:0003824//catalytic activity	GO:0008152//metabolic process;GO:0006950//response to stress	K00430//peroxidase [EC:1.11.1.7]	gi|460395410|ref|XP_004243276.1|//PREDICTED: peroxidase P7-like [Solanum lycopersicum]
Solyc10g006980.3.1	2323	2328.14703689024	1138.05597822576	-1.03261065416622	0.0129208677973	Down	0.00390207510413466	GO:0044424//intracellular part	GO:0070567//cytidylyltransferase activity	GO:0009103//lipopolysaccharide biosynthetic process	K00979//3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]	gi|460405607|ref|XP_004248267.1|//PREDICTED: 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial [Solanum lycopersicum];gi|970058464|ref|XP_015055932.1|//PREDICTED: 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial [Solanum pennellii]
Solyc06g082030.3.1	1534	339.888691301125	102.331372100317	-1.73181385650647	0.000335117279223084	Down	6.62290075458772e-05	NA	NA	NA	K04125//gibberellin 2-oxidase [EC:1.14.11.13]	gi|460393846|ref|XP_004242519.1|//PREDICTED: gibberellin 2-beta-dioxygenase 8 [Solanum lycopersicum]
Solyc05g054550.3.1	2548	178.874315493055	423.989361410778	1.24508181952328	0.0167821510051592	Up	0.0052475710753384	GO:0044464//cell part	GO:0032559//adenyl ribonucleotide binding;GO:0019787//ubiquitin-like protein transferase activity	GO:0032446//protein modification by small protein conjugation;GO:0019941//modification-dependent protein catabolic process	K10575//ubiquitin-conjugating enzyme E2 G1 [EC:2.3.2.23]	gi|970031257|ref|XP_015076918.1|//PREDICTED: ubiquitin-conjugating enzyme E2 7-like [Solanum pennellii];gi|460388256|ref|XP_004239784.1|//PREDICTED: ubiquitin-conjugating enzyme E2 7 [Solanum lycopersicum]
Solyc04g039730.3.1	2843	862.133636645534	238.219250534824	-1.85562151198143	0.00504551425026487	Down	0.00134864256331629	GO:0031224//intrinsic component of membrane;GO:0016021//integral component of membrane	GO:0004674//protein serine/threonine kinase activity;GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process;GO:0006468//protein phosphorylation	K13418//somatic embryogenesis receptor kinase 1 [EC:2.7.10.1 2.7.11.1]	gi|723691187|ref|XP_010319667.1|//PREDICTED: protein NSP-INTERACTING KINASE 3-like isoform X2 [Solanum lycopersicum];gi|460383241|ref|XP_004237339.1|//PREDICTED: protein NSP-INTERACTING KINASE 3-like isoform X1 [Solanum lycopersicum]
Solyc03g123440.3.1	4797	249.304839860865	87.3631695708229	-1.51281378687908	0.00713176036491568	Down	0.0020011887590236	NA	NA	NA	K10773//endonuclease III [EC:4.2.99.18]	gi|723684717|ref|XP_010318462.1|//PREDICTED: protein ROS1-like isoform X1 [Solanum lycopersicum]
Solyc06g082650.3.1	1078	6254.79320447191	12636.4594191477	1.01455820267713	0.00735639853180238	Up	0.00207135211380778	GO:0030529//intracellular ribonucleoprotein complex	GO:0005198//structural molecule activity	GO:0010467//gene expression	K02866//large subunit ribosomal protein L10e	gi|460393726|ref|XP_004242460.1|//PREDICTED: 60S ribosomal protein L10 [Solanum lycopersicum]
Solyc10g074940.2.1	5805	2173.7850357574	4766.7413200216	1.13279405561472	0.000429072371383023	Up	8.70633273236086e-05	GO:0016021//integral component of membrane;GO:0005886//plasma membrane	GO:0000287//magnesium ion binding;GO:0005524//ATP binding;GO:0004012//phospholipid-translocating ATPase activity	GO:0045332//phospholipid translocation	K14802//phospholipid-transporting ATPase [EC:3.6.3.1]	gi|460407175|ref|XP_004249030.1|//PREDICTED: phospholipid-transporting ATPase 1-like [Solanum lycopersicum]
Solyc03g025930.3.1	1487	70.9737277926774	158.814836984691	1.16198871099432	0.0215587723123183	Up	0.00702661044799878	NA	NA	NA	K10269//F-box and leucine-rich repeat protein 3;K10268//F-box and leucine-rich repeat protein 2/20	gi|723679568|ref|XP_010317594.1|//PREDICTED: F-box/LRR-repeat protein At3g48880-like isoform X1 [Solanum lycopersicum]
Solyc11g005610.1.1	1479	0.732209509557593	15.6427349593195	4.41709245301644	0.000521890346252401	Up	0.000107965238620129	NA	NA	NA	K14494//DELLA protein	gi|460410054|ref|XP_004250446.1|//PREDICTED: nodulation-signaling pathway 2 protein-like [Solanum lycopersicum]
Solyc12g094640.2.1	3756	42168.2995748682	3485.85021536243	-3.59657636223439	1.1782006294417e-26	Down	1.11987908344876e-28	GO:0016021//integral component of membrane	NA	NA	K05298//glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) [EC:1.2.1.13]	gi|460415552|ref|XP_004253122.1|//PREDICTED: glyceraldehyde-3-phosphate dehydrogenase B, chloroplastic-like [Solanum lycopersicum];gi|460415550|ref|XP_004253121.1|//PREDICTED: uncharacterized protein LOC101249163 [Solanum lycopersicum]
Solyc04g074190.3.1	1910	209.787381953128	97.2725790519084	-1.10882283243929	0.00999336007894538	Down	0.00292186955640553	NA	GO:0016791//phosphatase activity	NA	K17506//protein phosphatase 1L [EC:3.1.3.16]	gi|460384429|ref|XP_004237914.1|//PREDICTED: probable protein phosphatase 2C 10 [Solanum lycopersicum]
Solyc02g067960.2.1	1308	38.5834282414561	0.949919328855463	-5.34403252727949	0.000459881659638349	Down	9.38516507574161e-05	NA	NA	NA	K15032//mTERF domain-containing protein, mitochondrial	gi|723676688|ref|XP_010317072.1|//PREDICTED: uncharacterized protein LOC101251063 [Solanum lycopersicum]
Solyc10g083950.1.1	1710	192.069308645128	43.9719285380685	-2.12697229133745	0.000190262079494036	Down	3.56014477061302e-05	NA	NA	NA	K14794//ribosomal RNA-processing protein 12	gi|460408086|ref|XP_004249479.1|//PREDICTED: uncharacterized protein LOC101244433 [Solanum lycopersicum]
Solyc01g112070.3.1	4753	690.111646212045	1961.41080805754	1.5069900477295	0.0143853429283799	Up	0.00440868829421274	NA	NA	NA	K19073//divinyl chlorophyllide a 8-vinyl-reductase [EC:1.3.1.75];K13506//glycerol-3-phosphate O-acyltransferase 3/4 [EC:2.3.1.15]	gi|460370491|ref|XP_004231086.1|//PREDICTED: uncharacterized protein At1g04910 isoform X3 [Solanum lycopersicum];gi|460370489|ref|XP_004231085.1|//PREDICTED: uncharacterized protein At1g04910 isoform X1 [Solanum lycopersicum]
Solyc02g066955.1.1	2053	2307.08406907228	937.988662552245	-1.29842818597985	0.00180893384792469	Down	0.000427690002884534	NA	GO:0046872//metal ion binding;GO:0004556//alpha-amylase activity;GO:0016160//amylase activity;GO:0005509//calcium ion binding	GO:0044238//primary metabolic process;GO:0005975//carbohydrate metabolic process	K01176//alpha-amylase [EC:3.2.1.1]	gi|460375176|ref|XP_004233383.1|//PREDICTED: uncharacterized protein LOC101249042 isoform X1 [Solanum lycopersicum];gi|970009891|ref|XP_015065845.1|//PREDICTED: uncharacterized protein LOC107011043 isoform X2 [Solanum pennellii]
Solyc05g016390.3.1	4584	689.639869712109	323.065796078175	-1.09401516611094	0.00223944316089892	Down	0.00054107911767358	NA	NA	NA	K09651//rhomboid domain-containing protein 1 [EC:3.4.21.-]	gi|723699564|ref|XP_010321040.1|//PREDICTED: proline-rich receptor-like protein kinase PERK8 [Solanum lycopersicum]
Solyc02g089120.3.1	2069	557.254770278928	184.497139319032	-1.59473861440908	0.000569174859899355	Down	0.000119041305311439	GO:0031225//anchored component of membrane	NA	GO:0010215//cellulose microfibril organization;GO:0016049//cell growth	NA	gi|697182156|ref|XP_009600080.1|//PREDICTED: protein COBRA [Nicotiana tomentosiformis];gi|460372650|ref|XP_004232141.1|//PREDICTED: protein COBRA [Solanum lycopersicum];gi|525343665|ref|NP_001265883.1|//protein COBRA-like precursor [Solanum lycopersicum]
BGI_novel_G000265	1675	186.44814544876	70.4152910060481	-1.40481379117498	0.00322415366682425	Down	0.000815893068587663	NA	NA	NA	K17604//zinc finger SWIM domain-containing protein 3	gi|723720822|ref|XP_010324749.1|//PREDICTED: uncharacterized protein LOC101264955 [Solanum lycopersicum]
Solyc01g103780.3.1	1648	1042.64885999073	214.024592819689	-2.28440488702682	5.65613663934425e-10	Down	3.86029006509591e-11	NA	NA	NA	K16221//transcription factor TCP21 (protein CCA1 HIKING EXPEDITION)	gi|930588884|ref|NP_001234831.2|//TCP transcription factor 11 [Solanum lycopersicum]
Solyc06g068750.3.1	1034	666.862456980387	0.59029735152316	-10.1417316463101	5.44514915918208e-22	Down	8.24038526400746e-24	NA	NA	NA	NA	gi|460392111|ref|XP_004241661.1|//PREDICTED: uncharacterized protein At4g14100-like [Solanum lycopersicum]
Solyc01g087080.3.1	3251	138.181669471542	39.6210018149378	-1.80222898303097	0.0271250845934243	Down	0.00917347146697998	NA	NA	NA	NA	gi|831360260|ref|NP_001296742.1|//uncharacterized protein LOC101244228 [Solanum lycopersicum]
Solyc12g042430.2.1	1950	425.186005207548	868.52188459642	1.03046808969044	0.0217361790203168	Up	0.00709253433516674	NA	GO:0008440//inositol-1,4,5-trisphosphate 3-kinase activity;GO:0051766//inositol trisphosphate kinase activity	GO:0016310//phosphorylation;GO:0006796//phosphate-containing compound metabolic process	K00915//inositol-polyphosphate multikinase [EC:2.7.1.140 2.7.1.151]	gi|460413851|ref|XP_004252290.1|//PREDICTED: inositol polyphosphate multikinase alpha [Solanum lycopersicum]
Solyc10g084380.1.1	1660	793.060933247843	26.7537274958991	-4.88961990088418	6.74365397123149e-08	Down	6.38973027988312e-09	NA	GO:0043565//sequence-specific DNA binding;GO:0003700//transcription factor activity, sequence-specific DNA binding	GO:0010214//seed coat development;GO:0006355//regulation of transcription, DNA-templated	K18835//WRKY transcription factor 2	gi|460408745|ref|XP_004249802.1|//PREDICTED: WRKY transcription factor 44 [Solanum lycopersicum]
Solyc02g067120.3.1	1346	1128.27253654334	543.945907604398	-1.05258050005343	0.00596359081433562	Down	0.00163430394509237	NA	NA	NA	NA	gi|460375154|ref|XP_004233372.1|//PREDICTED: uncharacterized protein LOC101245722 [Solanum lycopersicum]
Solyc02g069070.3.1	784	128.753835320866	41.4058018631069	-1.63671056766088	0.0168450679611532	Down	0.00527051962374832	NA	NA	NA	K10745//ribonuclease H2 subunit C	gi|460374861|ref|XP_004233227.1|//PREDICTED: uncharacterized protein C12B10.15c [Solanum lycopersicum]
BGI_novel_G000204	726	0.397272355575074	19.0671647345233	5.58481811612361	5.89914242267573e-05	Up	9.8241926526089e-06	NA	NA	NA	NA	gi|723698411|ref|XP_010320844.1|//PREDICTED: uncharacterized protein LOC101261118 [Solanum lycopersicum]
Solyc02g092080.2.1	6631	210.234921264544	492.136940710848	1.2270574825071	9.85205424279907e-05	Up	1.71606714912032e-05	GO:0005840//ribosome	GO:0000166//nucleotide binding;GO:0003735//structural constituent of ribosome	GO:0006412//translation	K02893//large subunit ribosomal protein L23Ae	gi|460372253|ref|XP_004231945.1|//PREDICTED: 60S ribosomal protein L23a-like isoform X1 [Solanum lycopersicum]
Solyc11g069300.2.1	2226	826.09438222322	2565.19395172004	1.63468938494487	7.08400223714183e-09	Up	5.71937857672924e-10	NA	NA	NA	K00908;K07359//calcium/calmodulin-dependent protein kinase kinase [EC:2.7.11.17]	gi|723745772|ref|XP_010313408.1|//PREDICTED: serine/threonine-protein kinase GRIK1 [Solanum lycopersicum];gi|661889537|emb|CDP07124.1|//unnamed protein product [Coffea canephora]
Solyc06g060380.3.1	5618	449.775913038765	1114.46635635877	1.30907475771667	0.000656168701571141	Up	0.00013926586352863	NA	NA	NA	K11267//sister chromatid cohesion protein PDS5	gi|723710608|ref|XP_010322915.1|//PREDICTED: sister chromatid cohesion protein PDS5 homolog A isoform X2 [Solanum lycopersicum]
Solyc04g078970.2.1	3819	1033.42241177581	182.419287283187	-2.50209989731023	9.36732646486524e-16	Down	2.75139900637909e-17	NA	NA	NA	K17618//ubiquitin-like domain-containing CTD phosphatase 1 [EC:3.1.3.16];K20473//neuroblastoma-amplified sequence;K12472//epidermal growth factor receptor substrate 15;K11294//nucleolin;K20478//golgin subfamily B member 1	gi|460384927|ref|XP_004238158.1|//PREDICTED: protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1-like [Solanum lycopersicum]
Solyc10g006690.3.1	3004	31.6023261176858	106.324237370111	1.75036784871716	0.000108672561947212	Up	1.91315234112376e-05	GO:0016020//membrane	GO:0004672//protein kinase activity;GO:0005488//binding	GO:0006468//protein phosphorylation	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|566154310|ref|XP_006370410.1|//hypothetical protein POPTR_0001s42330g [Populus trichocarpa];gi|747099786|ref|XP_011097953.1|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 [Sesamum indicum]
Solyc01g106010.3.1	1584	1359.55788618757	348.823371456846	-1.96256896836947	2.07910761372056e-09	Down	1.54762856142834e-10	GO:0044424//intracellular part	GO:0019203//carbohydrate phosphatase activity	GO:0005975//carbohydrate metabolic process	K03841//fructose-1,6-bisphosphatase I [EC:3.1.3.11]	gi|460369448|ref|XP_004230574.1|//PREDICTED: fructose-1,6-bisphosphatase, chloroplastic [Solanum lycopersicum]
Solyc03g026345.1.1	2467	760.764288269052	1696.49630054499	1.15703685401193	1.87338482773653e-05	Up	2.81971370746984e-06	NA	GO:0004674//protein serine/threonine kinase activity;GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process;GO:0046777//protein autophosphorylation	K13412//calcium-dependent protein kinase [EC:2.7.11.1];K04515//calcium/calmodulin-dependent protein kinase (CaM kinase) II [EC:2.7.11.17]	gi|723679403|ref|XP_010317567.1|//PREDICTED: calcium-dependent protein kinase 26 [Solanum lycopersicum]
Solyc04g009900.3.1	1390	226.802835527922	1190.98240483494	2.39264151715216	4.53668992569495e-05	Up	7.34582564381201e-06	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process	K04515//calcium/calmodulin-dependent protein kinase (CaM kinase) II [EC:2.7.11.17];K08794//calcium/calmodulin-dependent protein kinase I [EC:2.7.11.17]	gi|350539451|ref|NP_001234394.1|//phosphoenolpyruvate carboxylase kinase [Solanum lycopersicum]
Solyc07g007670.3.1	1968	1791.40202235909	554.812593619273	-1.69101669929792	0.00231355906315237	Down	0.00056131489272621	NA	GO:0043169//cation binding;GO:0016791//phosphatase activity	NA	K14407//cleavage stimulation factor subunit 2	gi|698487187|ref|XP_009790275.1|//PREDICTED: bifunctional purple acid phosphatase 26-like isoform X1 [Nicotiana sylvestris];gi|460394298|ref|XP_004242741.1|//PREDICTED: bifunctional purple acid phosphatase 26 [Solanum lycopersicum]
Solyc04g015970.3.1	3574	1620.9309830764	5121.05589860982	1.65961864256162	2.40889671817772e-06	Up	3.04299648796195e-07	NA	GO:0032559//adenyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity	GO:0009207//purine ribonucleoside triphosphate catabolic process	K05643//ATP-binding cassette, subfamily A (ABC1), member 3	gi|460381748|ref|XP_004236604.1|//PREDICTED: ABC transporter A family member 1 isoform X1 [Solanum lycopersicum];gi|723688857|ref|XP_010319182.1|//PREDICTED: ABC transporter A family member 1 isoform X2 [Solanum lycopersicum]
Solyc06g074120.3.1	4100	3168.16085520181	1275.19753861189	-1.31292483664773	0.0370618565810067	Down	0.013154279050408	GO:0043231//intracellular membrane-bounded organelle;GO:0005634//nucleus	GO:0003677//DNA binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0006355//regulation of transcription, DNA-templated;GO:0006351//transcription, DNA-templated	K16670//homeobox protein Meis2;K15613//homeobox protein Meis1	gi|350538443|ref|NP_001234599.1|//bell-like homeodomain protein 2 [Solanum lycopersicum]
Solyc04g014530.1.1	702	176.50954587939	21.0525615144669	-3.06767852337281	2.50995322993198e-05	Down	3.87888254484046e-06	NA	NA	NA	K14516//ethylene-responsive transcription factor 1	gi|460381912|ref|XP_004236685.1|//PREDICTED: ethylene-responsive transcription factor 1B-like [Solanum lycopersicum]
Solyc06g073350.3.1	1817	44.4088161711513	11.9468662103087	-1.89421387952409	0.0341298398261148	Down	0.0119495148906626	NA	GO:0046872//metal ion binding;GO:0004674//protein serine/threonine kinase activity;GO:0032559//adenyl ribonucleotide binding	GO:0006464//cellular protein modification process	K13412//calcium-dependent protein kinase [EC:2.7.11.1]	gi|723707893|ref|XP_010322474.1|//PREDICTED: calcium-dependent protein kinase 24 [Solanum lycopersicum]
Solyc05g054540.3.1	2194	611.8029446009	169.564090901254	-1.85123637221929	3.88435724979035e-12	Down	1.88223662767536e-13	NA	NA	NA	K10575//ubiquitin-conjugating enzyme E2 G1 [EC:2.3.2.23]	gi|723701464|ref|XP_010321377.1|//PREDICTED: ubiquitin-conjugating enzyme E2 7-like [Solanum lycopersicum]
Solyc05g053210.3.1	2224	7881.52985389432	2688.65650397288	-1.55159024105586	9.3863854562599e-07	Down	1.09230264628162e-07	NA	NA	NA	K07198//5'-AMP-activated protein kinase, catalytic alpha subunit [EC:2.7.11.11]	gi|836939716|ref|NP_001296828.1|//CBL-interacting serine/threonine-protein kinase 1 [Solanum lycopersicum]
Solyc06g066840.3.1	1251	56.8663364924608	5.68734691835044	-3.32174715035437	0.00580842605410522	Down	0.00158634030484676	NA	GO:0016701//oxidoreductase activity, acting on single donors with incorporation of molecular oxygen;GO:0046914//transition metal ion binding	GO:0008152//metabolic process	K05282//gibberellin 20-oxidase [EC:1.14.11.12];K04124//gibberellin 3-beta-dioxygenase [EC:1.14.11.15]	gi|460392228|ref|XP_004241719.1|//PREDICTED: probable 2-oxoglutarate-dependent dioxygenase AOP1 [Solanum lycopersicum]
Solyc05g018230.3.1	1931	66.2992288667973	857.628217302251	3.69328837807476	5.72259616092841e-05	Up	9.49215480696713e-06	GO:0031224//intrinsic component of membrane;GO:0016021//integral component of membrane;GO:0005886//plasma membrane	GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;GO:0022857//transmembrane transporter activity;GO:0022891//substrate-specific transmembrane transporter activity	GO:0055085//transmembrane transport;GO:0071702//organic substance transport;GO:0008152//metabolic process	K16055//trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12];K08150//MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13	gi|726965381|ref|NP_001289836.1|//sugar transport protein 14 [Solanum lycopersicum];gi|697113194|ref|XP_009610479.1|//PREDICTED: sugar transport protein 14-like [Nicotiana tomentosiformis]
Solyc07g062440.1.1	1791	480.834368089547	138.041557972395	-1.80043735611814	0.000573416044415349	Down	0.000120077953538297	NA	NA	NA	NA	gi|723718867|ref|XP_010324394.1|//PREDICTED: uncharacterized protein LOC104648569 [Solanum lycopersicum]
Solyc03g005195.1.1	453	1052.24383684731	126.187195288703	-3.05983163270179	4.02694753803303e-07	Down	4.37398431706734e-08	NA	GO:0043169//cation binding;GO:0051536//iron-sulfur cluster binding	GO:0006091//generation of precursor metabolites and energy	K02639//ferredoxin	gi|460376454|ref|XP_004234013.1|//PREDICTED: ferredoxin, root R-B2 [Solanum lycopersicum]
Solyc05g054800.2.1	1365	952.084031893026	6420.55605822847	2.75353743072514	2.10722766411679e-07	Up	2.17336325727269e-08	NA	NA	NA	NA	gi|460388218|ref|XP_004239766.1|//PREDICTED: ALA-interacting subunit 1-like [Solanum lycopersicum]
Solyc01g106780.3.1	3260	768.493471906902	311.33875544169	-1.30354783012619	1.64069516260558e-05	Down	2.43706956276399e-06	NA	NA	NA	K00873//pyruvate kinase [EC:2.7.1.40]	gi|460369662|ref|XP_004230676.1|//PREDICTED: pyruvate kinase isozyme A, chloroplastic-like [Solanum lycopersicum]
Solyc02g093550.3.1	2101	589.996918146625	242.781479155255	-1.28104905030824	7.59796253482137e-06	Down	1.05778999804524e-06	NA	GO:0016741//transferase activity, transferring one-carbon groups	GO:0006730//one-carbon metabolic process	NA	gi|460372014|ref|XP_004231829.1|//PREDICTED: uncharacterized protein LOC101257418 [Solanum lycopersicum]
Solyc08g023440.3.1	2685	541.081308631149	3591.63960032641	2.73072528132108	1.17254720849174e-08	Up	9.78579543690552e-10	NA	NA	NA	K15601//lysine-specific demethylase 3 [EC:1.14.11.-]	gi|460398637|ref|XP_004244862.1|//PREDICTED: CSC1-like protein ERD4 [Solanum lycopersicum]
Solyc07g008475.1.1	2996	148.996333843281	60.3297428963733	-1.30433549338205	0.00108819466267884	Down	0.000243858144924154	NA	NA	NA	K19090//CRISPR-associated protein Cas5t;K06066//CBF1 interacting corepressor;K17710//pentatricopeptide repeat domain-containing protein 1	gi|723712931|ref|XP_010323326.1|//PREDICTED: pentatricopeptide repeat-containing protein At3g14730 isoform X1 [Solanum lycopersicum];gi|723712928|ref|XP_010323324.1|//PREDICTED: uncharacterized protein LOC104644347 [Solanum lycopersicum]
Solyc02g089520.2.1	2602	74.3401688006406	368.973135358755	2.31130190945401	1.60943397683611e-05	Up	2.38643520197334e-06	NA	NA	NA	K12135//zinc finger protein CONSTANS	gi|460372605|ref|XP_004232119.1|//PREDICTED: zinc finger protein CONSTANS-LIKE 2-like [Solanum lycopersicum]
Solyc12g062220.1.1	657	0.399911068000384	21.5438212634734	5.75145114562583	2.67341704858859e-05	Up	4.15441914252491e-06	NA	NA	NA	NA	gi|565348658|ref|XP_006341323.1|//PREDICTED: uncharacterized protein LOC102604349 [Solanum tuberosum]
Solyc02g083785.1.1	4550	248.389739484298	92.5112802056683	-1.42490438572037	0.000701954782549551	Down	0.000150134804766264	NA	NA	NA	NA	NA
Solyc03g031860.3.1	2554	5625.90620247674	179.700867344018	-4.96841622233442	1.8476880698255e-29	Down	1.40498123693306e-31	GO:0009536//plastid;GO:0009507//chloroplast	GO:0004337//geranyltranstransferase activity;GO:0016767//geranylgeranyl-diphosphate geranylgeranyltransferase activity	GO:0016117//carotenoid biosynthetic process;GO:0016109//tetraterpenoid biosynthetic process	K02291//phytoene synthase [EC:2.5.1.32]	gi|350537597|ref|NP_001234812.1|//phytoene synthase 1, chloroplastic [Solanum lycopersicum]
Solyc03g078720.3.1	1152	36.8857774310727	3.25338268658452	-3.50305220547069	0.000322948114126175	Down	6.36012446231585e-05	NA	NA	NA	K00699//glucuronosyltransferase [EC:2.4.1.17];K13030//cyanohydrin beta-glucosyltransferase [EC:2.4.1.85]	gi|723682609|ref|XP_010318075.1|//PREDICTED: LOW QUALITY PROTEIN: 7-deoxyloganetic acid glucosyltransferase-like [Solanum lycopersicum]
Solyc05g013140.3.1	2699	134.006816316916	406.573228951834	1.6012088373442	0.00013289990990197	Up	2.39416007364031e-05	GO:0016021//integral component of membrane	NA	NA	K13506//glycerol-3-phosphate O-acyltransferase 3/4 [EC:2.3.1.15]	gi|698578342|ref|XP_009776724.1|//PREDICTED: uncharacterized protein At1g04910 [Nicotiana sylvestris];gi|460386847|ref|XP_004239107.1|//PREDICTED: uncharacterized protein At1g04910 [Solanum lycopersicum]
BGI_novel_G000008	1883	178.346722775061	32.375497817415	-2.46171042420098	2.76291285067689e-07	Down	2.90420986987805e-08	NA	NA	NA	K10085//ER degradation enhancer, mannosidase alpha-like 2;K18674//N-acetylgalactosamine kinase [EC:2.7.1.157]	gi|460416291|ref|XP_004253479.1|//PREDICTED: uncharacterized protein LOC101257649 [Solanum lycopersicum]
Solyc10g050160.2.1	1119	189.464682761849	1307.2593027242	2.78654448429561	1.92731399185554e-06	Up	2.38794979459066e-07	NA	GO:0043169//cation binding;GO:0008171//O-methyltransferase activity	GO:0009699//phenylpropanoid biosynthetic process;GO:0006730//one-carbon metabolic process	K00588//caffeoyl-CoA O-methyltransferase [EC:2.1.1.104]	gi|460406614|ref|XP_004248757.1|//PREDICTED: caffeoyl-CoA O-methyltransferase 5 [Solanum lycopersicum]
Solyc03g119200.3.1	1711	53.8682109523453	316.251310798085	2.55356540257675	2.91088521521739e-06	Up	3.73584642726639e-07	NA	NA	NA	K14759//isochorismate synthase / 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase / 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase / O-succinylbenzoate synthase [EC:5.4.4.2 2.2.1.9 4.2.99.20 4.2.1.113]	gi|460380078|ref|XP_004235785.1|//PREDICTED: L-Ala-D/L-amino acid epimerase [Solanum lycopersicum]
Solyc01g096880.3.1	1890	316.919072643623	19.1947640925086	-4.04532975139061	1.2060452965854e-09	Down	8.6492886187204e-11	GO:0016020//membrane	NA	GO:0006810//transport	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460368414|ref|XP_004230062.1|//PREDICTED: protein NRT1/ PTR FAMILY 6.2-like [Solanum lycopersicum]
Solyc11g068620.2.1	1090	149.99988964116	1144.21722473567	2.93132762318194	0.000698396103655706	Up	0.000149268649363095	NA	NA	NA	K12581//CCR4-NOT transcription complex subunit 7/8;K03094//S-phase kinase-associated protein 1;K13126//polyadenylate-binding protein;K01054//acylglycerol lipase [EC:3.1.1.23]	gi|460411340|ref|XP_004251070.1|//PREDICTED: NAC domain-containing protein 90-like [Solanum lycopersicum]
Solyc06g076090.3.1	1547	18.5963803395819	849.68573208357	5.51383559648659	2.21243094673397e-32	Up	1.30298229306682e-34	GO:0043232//intracellular non-membrane-bounded organelle	GO:0032559//adenyl ribonucleotide binding	NA	K10355//actin, other eukaryote	gi|460391240|ref|XP_004241231.1|//PREDICTED: actin-82 [Solanum lycopersicum]
Solyc03g113900.3.1	2529	76.7583292231013	285.300326498663	1.89408618369396	5.8014684169166e-06	Up	7.86705758936283e-07	GO:0016020//membrane;GO:0044464//cell part	GO:0046872//metal ion binding;GO:0015924//mannosyl-oligosaccharide mannosidase activity;GO:0005509//calcium ion binding;GO:0004571//mannosyl-oligosaccharide 1,2-alpha-mannosidase activity	GO:0008152//metabolic process	K10084//ER degradation enhancer, mannosidase alpha-like 1	gi|460380804|ref|XP_004236144.1|//PREDICTED: probable alpha-mannosidase I MNS5 [Solanum lycopersicum];gi|698537143|ref|XP_009764735.1|//PREDICTED: probable alpha-mannosidase I MNS5 isoform X2 [Nicotiana sylvestris]
Solyc10g008515.1.1	4539	309.786595881863	65.8848585473105	-2.23325586891927	5.40786094361687e-07	Down	5.99887959154757e-08	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial;K17710//pentatricopeptide repeat domain-containing protein 1	gi|460406017|ref|XP_004248470.1|//PREDICTED: pentatricopeptide repeat-containing protein At1g03560, mitochondrial [Solanum lycopersicum]
Solyc09g075580.1.1	486	497.641155204156	178.636702200528	-1.4780772790676	0.00116846404891786	Down	0.000263718868950263	NA	NA	NA	NA	gi|723731806|ref|XP_010326654.1|//PREDICTED: leucine-rich repeat extensin-like protein 3 [Solanum lycopersicum]
Solyc01g081410.3.1	5291	439.565954223868	108.83617656578	-2.01392146885416	9.99126314113468e-07	Down	1.17274815981188e-07	NA	NA	NA	K14794//ribosomal RNA-processing protein 12	gi|460367336|ref|XP_004229530.1|//PREDICTED: uncharacterized protein LOC101259483 [Solanum lycopersicum]
Solyc11g072070.2.1	1308	474.618127359408	975.519421867274	1.03940339285281	0.000572328735571762	Up	0.000119807595757083	NA	NA	NA	K10523//speckle-type POZ protein	gi|460411683|ref|XP_004251235.1|//PREDICTED: BTB/POZ and MATH domain-containing protein 4 [Solanum lycopersicum]
Solyc04g005820.3.1	2511	212.606030076055	580.221548463337	1.44842135968326	0.00384769254850839	Up	0.00099691780619807	NA	GO:0005515//protein binding	GO:0044267//cellular protein metabolic process	K09510//DnaJ homolog subfamily B member 4	gi|460382536|ref|XP_004236995.1|//PREDICTED: dnaJ homolog subfamily B member 1-like [Solanum lycopersicum]
Solyc01g079600.3.1	3251	803.862832744511	16336.1314715028	4.34497322389151	7.03412631843533e-51	Up	8.91457785995233e-54	NA	NA	NA	NA	gi|460367082|ref|XP_004229404.1|//PREDICTED: uncharacterized protein LOC101246277 isoform X1 [Solanum lycopersicum];gi|723658681|ref|XP_010322462.1|//PREDICTED: uncharacterized protein LOC101246277 isoform X2 [Solanum lycopersicum]
Solyc01g066740.3.1	6363	588.651219617272	177.33469858791	-1.7309382272804	0.00383157313128005	Down	0.000992598526256013	NA	NA	NA	K10260//F-box and WD-40 domain protein 7;K12412//pheromone receptor transcription factor;K14555//U3 small nucleolar RNA-associated protein 13	gi|460366760|ref|XP_004229247.1|//PREDICTED: putative E3 ubiquitin-protein ligase LIN [Solanum lycopersicum]
Solyc07g056430.3.1	820	71.1601829242436	26.204859735908	-1.44123583236999	0.0189832938236635	Down	0.00605770010527745	NA	GO:0016765//transferase activity, transferring alkyl or aryl (other than methyl) groups	GO:0009755//hormone-mediated signaling pathway	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|970041547|ref|XP_015082174.1|//PREDICTED: probable glutathione S-transferase parC isoform X2 [Solanum pennellii]
Solyc02g077110.3.1	1485	148.201860443373	2198.72481436283	3.89103158855822	8.26478433041401e-24	Up	1.05974571703534e-25	NA	NA	NA	K00145//N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]	gi|723675027|ref|XP_004232957.2|//PREDICTED: phospholipase A1-II 1-like [Solanum lycopersicum]
Solyc08g062250.2.1	1188	164.14629731223	12.9179605898753	-3.66753197797352	1.7793098087138e-08	Down	1.51945682561627e-09	NA	NA	NA	K07466//replication factor A1	gi|723726857|ref|XP_010325772.1|//PREDICTED: uncharacterized protein LOC101258482 [Solanum lycopersicum]
Solyc02g090490.3.1	1507	646.459397126379	11812.3060199823	4.1915870675939	3.56413935782779e-21	Up	5.79232428810539e-23	NA	NA	NA	NA	gi|460372466|ref|XP_004232051.1|//PREDICTED: patatin-like protein 3 [Solanum lycopersicum]
Solyc03g119840.3.1	2425	38.9128838738458	225.421185979442	2.53430330310013	0.00087099651154996	Up	0.000190964718985272	NA	NA	NA	NA	gi|460379971|ref|XP_004235732.1|//PREDICTED: uncharacterized protein LOC101257549 [Solanum lycopersicum]
Solyc06g082380.3.1	4117	251.41637572364	1177.05993765565	2.2270372601852	1.80565222505939e-11	Up	9.65150324562086e-13	NA	NA	NA	K17408//small subunit ribosomal protein S29	gi|460393793|ref|XP_004242493.1|//PREDICTED: protein LURP-one-related 7 [Solanum lycopersicum]
Solyc01g008110.3.1	1940	17401.7203205741	2641.35958719513	-2.71987731244234	2.29716336539901e-06	Down	2.88643868523932e-07	NA	GO:0016741//transferase activity, transferring one-carbon groups;GO:0005506//iron ion binding;GO:0016491//oxidoreductase activity	GO:0006730//one-carbon metabolic process	K05917//sterol 14-demethylase [EC:1.14.13.70]	gi|927928744|ref|NP_001234537.2|//obtusifoliol 14alpha-demethylase [Solanum lycopersicum]
Solyc04g078740.2.1	2524	289.482695639066	49.7390581817021	-2.54102601581285	6.23474177517283e-05	Down	1.04462368717019e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13199//plasminogen activator inhibitor 1 RNA-binding protein;K12663//Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase [EC:5.3.3.-];K01183//chitinase [EC:3.2.1.14]	gi|723695310|ref|XP_010320328.1|//PREDICTED: subtilisin-like protease [Solanum lycopersicum]
Solyc03g115420.2.1	1290	194.401660079862	0.58144217647078	-8.38518909842376	9.25374029763543e-13	Down	4.10119920004791e-14	NA	NA	NA	K00383//glutathione reductase (NADPH) [EC:1.8.1.7];K04505//presenilin 1 [EC:3.4.23.-]	gi|460380554|ref|XP_004236020.1|//PREDICTED: putative F-box protein At3g25750 [Solanum lycopersicum]
Solyc07g007260.3.1	1047	2020.14155977105	163.239779426611	-3.62939182077737	0.0194848495250673	Down	0.00623808605079778	GO:0016020//membrane	GO:0004857//enzyme inhibitor activity	GO:0006508//proteolysis	NA	gi|460394248|ref|XP_004242716.1|//PREDICTED: metallocarboxypeptidase inhibitor-like [Solanum lycopersicum]
Solyc10g049970.2.1	1081	368.854538084812	2962.79865840847	3.00583669842684	2.18393178558784e-11	Up	1.18851215407717e-12	NA	NA	NA	NA	gi|460406621|ref|XP_004248760.1|//PREDICTED: uncharacterized protein LOC101254542 [Solanum lycopersicum]
Solyc01g007750.3.1	2758	890.594878036889	152.689524417839	-2.54416822818104	1.88182988813173e-07	Down	1.92405672549029e-08	NA	NA	NA	K15032//mTERF domain-containing protein, mitochondrial	gi|723655514|ref|XP_010315480.1|//PREDICTED: uncharacterized protein LOC101255820 isoform X1 [Solanum lycopersicum];gi|723655520|ref|XP_004228568.2|//PREDICTED: uncharacterized protein LOC101255820 isoform X3 [Solanum lycopersicum]
Solyc05g006730.3.1	1005	83.7167511026783	16.4957790224665	-2.34341941266824	5.42989543798575e-05	Down	8.96819244286374e-06	NA	NA	NA	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|460386115|ref|XP_004238745.1|//PREDICTED: glutathione S-transferase U17-like [Solanum lycopersicum];gi|723697232|ref|XP_010320650.1|//PREDICTED: glutathione S-transferase U17-like isoform X1 [Solanum lycopersicum];gi|723697227|ref|XP_010320649.1|//PREDICTED: glutathione S-transferase U17-like [Solanum lycopersicum]
Solyc12g042480.2.1	1500	190.686830449692	2584.17353515029	3.76042584041228	1.00953714097521e-07	Up	9.82518814330649e-09	NA	NA	NA	K20562	gi|460413861|ref|XP_004252295.1|//PREDICTED: cytochrome P450 CYP736A12-like [Solanum lycopersicum]
Solyc05g055810.3.1	457	15.3715603302139	0.767894618907877	-4.32321146873318	0.0084034797044158	Down	0.00239938327627199	NA	GO:0003824//catalytic activity	NA	K20860	gi|723701114|ref|XP_010321332.1|//PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101259936 [Solanum lycopersicum]
Solyc08g075470.3.1	1590	1226.92169629562	383.320751061793	-1.6784191716704	5.43177510819873e-07	Down	6.02743197297884e-08	NA	NA	NA	K07874//Ras-related protein Rab-1A;K00801//farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]	gi|460400977|ref|XP_004246006.1|//PREDICTED: WAT1-related protein At4g19185-like [Solanum lycopersicum]
Solyc02g080480.3.1	2546	253.41711137896	100.264658382452	-1.33770077262399	0.002105456328174	Down	0.000505488452727327	GO:0044464//cell part	GO:0015291//secondary active transmembrane transporter activity	GO:0015893//drug transport	K03327//multidrug resistance protein, MATE family	gi|460373830|ref|XP_004232716.1|//PREDICTED: protein TRANSPARENT TESTA 12-like [Solanum lycopersicum]
Solyc11g068720.2.1	2459	293.316025199489	84.7861906384691	-1.79055468099347	4.95629176424057e-05	Down	8.09544897528783e-06	NA	NA	NA	NA	gi|460411358|ref|XP_004251079.1|//PREDICTED: uncharacterized protein At5g41620 isoform X1 [Solanum lycopersicum]
Solyc04g079250.3.1	1783	264.640804668691	3450.63135652039	3.70475292224536	5.45097425856953e-22	Up	8.26951887296033e-24	NA	NA	NA	K16815//calcium-independent phospholipase A2-gamma	gi|460384964|ref|XP_004238176.1|//PREDICTED: patatin-like protein 2 [Solanum lycopersicum]
Solyc03g114850.3.1	2909	482.565518867784	179.969373100189	-1.42297342130623	0.0136938125484765	Down	0.00416919117697764	GO:0005634//nucleus	GO:0003677//DNA binding	NA	K20641;K13415//protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1]	gi|460380657|ref|XP_004236071.1|//PREDICTED: squamosa promoter-binding-like protein 6 [Solanum lycopersicum]
Solyc02g087410.3.1	4089	88.5677597106431	20.4070726255047	-2.11771238285224	0.00067939345503115	Down	0.000144600291793196	NA	NA	NA	K05658//ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:3.6.3.44]	gi|460372885|ref|XP_004232253.1|//PREDICTED: ABC transporter B family member 15-like [Solanum lycopersicum]
Solyc05g052660.1.1	342	4.79405322285774	27.9350880080693	2.54276053466429	0.0205073736124976	Up	0.00662705155496912	NA	NA	NA	K19747//BAHD acyltransferase [EC:2.3.1.-]	gi|970027848|ref|XP_015075212.1|//PREDICTED: BAHD acyltransferase DCR-like [Solanum pennellii]
Solyc09g064820.1.1	819	7.26286441206355	314.986432063062	5.43860722898321	5.99222155389907e-21	Up	9.93938643016657e-23	NA	NA	NA	NA	gi|460403334|ref|XP_004247146.1|//PREDICTED: EID1-like F-box protein 3 [Solanum lycopersicum]
Solyc03g123640.3.1	7324	1240.00590607134	2870.4486944467	1.21092927743836	6.88438077177311e-05	Up	1.16116829403136e-05	GO:0005730//nucleolus	GO:0003723//RNA binding	GO:0010252//auxin homeostasis	K14790//nucleolar protein 9	gi|460379549|ref|XP_004235524.1|//PREDICTED: pumilio homolog 23 isoform X1 [Solanum lycopersicum]
Solyc01g110940.3.1	258	21.3335470686141	0.83524800521428	-4.67477541618658	0.000365649216875891	Down	7.28374601900473e-05	NA	NA	NA	K14488//SAUR family protein	gi|565387675|ref|XP_006359618.1|//PREDICTED: auxin-induced protein 15A-like [Solanum tuberosum]
Solyc08g014430.3.1	1727	201.614548101074	4.57242867459006	-5.46249526882716	4.08880057986912e-13	Down	1.71916171689741e-14	NA	GO:0008092//cytoskeletal protein binding	GO:0007010//cytoskeleton organization	K19984//exocyst complex component 5;K02184//formin 2	gi|460398555|ref|XP_004244823.1|//PREDICTED: formin-like protein 2 [Solanum lycopersicum]
Solyc07g047710.3.1	4362	1002.92958254665	134.136567325696	-2.90244582244633	5.04451759006517e-10	Down	3.42029875366354e-11	NA	GO:0003824//catalytic activity	NA	K08496//golgi SNAP receptor complex member 2	gi|460395985|ref|XP_004243560.1|//PREDICTED: glucan endo-1,3-beta-glucosidase 12-like [Solanum lycopersicum]
Solyc01g101100.3.1	2828	1196.17571314199	380.348777358951	-1.65303445830081	0.00175501799388699	Down	0.000413307130064783	GO:0016021//integral component of membrane	GO:0004674//protein serine/threonine kinase activity;GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process;GO:0006468//protein phosphorylation	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|723663368|ref|XP_010313851.1|//PREDICTED: probable receptor-like protein kinase At5g18500 [Solanum lycopersicum]
Solyc08g016080.3.1	2196	9408.24027809493	280.786737287815	-5.06637820784855	9.02394079738861e-46	Down	1.84999531778878e-48	NA	NA	NA	K15891//farnesol dehydrogenase [EC:1.1.1.216];K19073//divinyl chlorophyllide a 8-vinyl-reductase [EC:1.3.1.75]	gi|460398492|ref|XP_004244793.1|//PREDICTED: uncharacterized protein LOC101263137 [Solanum lycopersicum]
Solyc09g020140.3.1	1808	1147.63021032928	3514.34639915272	1.61459854934791	4.48967526036855e-09	Up	3.52774543344897e-10	NA	GO:0005488//binding	NA	K06883//uncharacterized protein	gi|460401456|ref|XP_004246240.1|//PREDICTED: GPN-loop GTPase 3 homolog [Solanum lycopersicum];gi|970053447|ref|XP_015088361.1|//PREDICTED: GPN-loop GTPase 3 [Solanum pennellii]
Solyc07g008495.1.1	472	10.301835646868	0.396729437099619	-4.69860217009509	0.00201328079497685	Down	0.000481332302779987	NA	NA	NA	K13162//poly(rC)-binding protein 2/3/4	gi|460394420|ref|XP_004242801.1|//PREDICTED: poly(rC)-binding protein 2 [Solanum lycopersicum]
Solyc03g043900.1.1	612	16.0929482884462	75.2628896494804	2.22551002400504	0.0267932005374342	Up	0.00904824798230034	NA	NA	NA	K09060//plant G-box-binding factor	gi|460377873|ref|XP_004234711.1|//PREDICTED: light-inducible protein CPRF2-like [Solanum lycopersicum]
Solyc06g053920.3.1	2150	485.24563681933	198.702223865824	-1.28810722147165	0.000448875871909783	Down	9.14215656819388e-05	NA	NA	NA	NA	gi|460390849|ref|XP_004241037.1|//PREDICTED: uncharacterized protein LOC101257179 [Solanum lycopersicum]
Solyc04g007020.3.1	1679	1768.96718216689	818.380679632468	-1.11206329204667	0.0101927722826351	Down	0.00298701266162505	NA	NA	NA	K12200//programmed cell death 6-interacting protein	gi|460382508|ref|XP_004236981.1|//PREDICTED: programmed cell death 6-interacting protein isoform X1 [Solanum lycopersicum]
Solyc11g066290.2.1	1511	214.142804621423	464.398733878821	1.11679083661832	0.0124765190913308	Up	0.0037478853197046	NA	NA	NA	K12867//pre-mRNA-splicing factor SYF1	gi|460411141|ref|XP_004250973.1|//PREDICTED: probable inactive purple acid phosphatase 29 [Solanum lycopersicum]
BGI_novel_G000455	2125	177.29473417177	6.70321340809563	-4.72515301198017	5.32198950516014e-05	Down	8.76616655110432e-06	NA	NA	NA	K03013//DNA-directed RNA polymerases I, II, and III subunit RPABC1;K08596//sentrin-specific protease 7 [EC:3.4.22.68];K02328//DNA polymerase delta subunit 2	gi|970061476|ref|XP_015057553.1|//PREDICTED: uncharacterized protein LOC107003796 [Solanum pennellii]
Solyc02g092890.1.1	273	3.04858386503664	74.0852925703482	4.60297602731702	1.1666714141429e-07	Up	1.15110303907718e-08	NA	NA	NA	NA	gi|697104490|ref|XP_009606049.1|//PREDICTED: uncharacterized protein LOC104100513 [Nicotiana tomentosiformis]
Solyc05g006590.3.1	2217	720.228094195493	1672.01689787117	1.21506364631156	0.000113534394015024	Up	2.01143944667291e-05	NA	GO:0004721//phosphoprotein phosphatase activity;GO:0016791//phosphatase activity	GO:0006470//protein dephosphorylation	K04382//serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]	gi|806776591|ref|NP_001234516.2|//protein phosphatase 2A catalytic subunit [Solanum lycopersicum]
Solyc09g065270.3.1	1437	4470.95299051286	1647.63868739554	-1.44018246992475	3.1945874622108e-05	Down	5.04646699897471e-06	NA	NA	GO:0006412//translation	K02838//ribosome recycling factor	gi|460403382|ref|XP_004247170.1|//PREDICTED: ribosome-recycling factor, chloroplastic [Solanum lycopersicum]
Solyc04g081260.3.1	3690	2172.94232072139	479.009575400633	-2.18152347883322	2.51574431683055e-07	Down	2.62658410296794e-08	NA	NA	NA	K10352//myosin heavy chain;K20478//golgin subfamily B member 1	gi|723696001|ref|XP_010320419.1|//PREDICTED: filament-like plant protein 6 [Solanum lycopersicum]
Solyc02g070855.1.1	1625	373.068169756074	101.718269167604	-1.8748604558717	0.000113505084284083	Down	2.0104970945205e-05	NA	NA	NA	NA	gi|970012237|ref|XP_015067062.1|//PREDICTED: tobamovirus multiplication protein 1 [Solanum pennellii];gi|720078350|ref|XP_010241320.1|//PREDICTED: tobamovirus multiplication protein 1 isoform X1 [Nelumbo nucifera];gi|723675682|ref|XP_010316915.1|//PREDICTED: tobamovirus multiplication protein 1 isoform X1 [Solanum lycopersicum];gi|565400094|ref|XP_006365567.1|//PREDICTED: tobamovirus multiplication protein 1 [Solanum tuberosum]
Solyc07g017860.3.1	2975	263.706518022401	966.795357124891	1.87427731414234	6.46327359845911e-09	Up	5.18931390005999e-10	NA	GO:0032559//adenyl ribonucleotide binding;GO:0016405//CoA-ligase activity	NA	K01895//acetyl-CoA synthetase [EC:6.2.1.1]	gi|460394643|ref|XP_004242910.1|//PREDICTED: acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal-like [Solanum lycopersicum]
Solyc04g051680.3.1	2091	89.895392911258	24.435778984413	-1.87925208354878	0.00166236676981115	Down	0.000388761335686415	NA	NA	NA	K07897//Ras-related protein Rab-7A	gi|723692364|ref|XP_004237468.2|//PREDICTED: ras-related protein Rab7-like [Solanum lycopersicum]
Solyc04g051310.3.1	3461	1326.60160691049	4921.25769301905	1.89129188411565	6.88077606291719e-09	Up	5.55017123906098e-10	NA	NA	NA	K19791//iron transport multicopper oxidase	gi|460383554|ref|XP_004237486.1|//PREDICTED: uncharacterized protein LOC101264617 isoform X1 [Solanum lycopersicum];gi|723692460|ref|XP_010319805.1|//PREDICTED: uncharacterized protein LOC101264617 isoform X3 [Solanum lycopersicum]
Solyc04g008260.3.1	1273	624.490793122299	118.227146797771	-2.40111896346715	1.22441857341109e-09	Down	8.79474649978814e-11	NA	GO:0016791//phosphatase activity	NA	K14379//tartrate-resistant acid phosphatase type 5 [EC:3.1.3.2]	gi|460382376|ref|XP_004236915.1|//PREDICTED: purple acid phosphatase 4 [Solanum lycopersicum]
Solyc04g080670.3.1	1965	537.984475014078	204.087219600652	-1.39837870014448	6.04296780344302e-05	Down	1.00956395165617e-05	NA	GO:0005524//ATP binding;GO:0035299//inositol pentakisphosphate 2-kinase activity	GO:0016310//phosphorylation	K10572//inositol-pentakisphosphate 2-kinase [EC:2.7.1.158]	gi|723695850|ref|XP_004238270.2|//PREDICTED: inositol-pentakisphosphate 2-kinase [Solanum lycopersicum]
Solyc03g121350.3.1	3466	54.9860802514663	1042.87228594526	4.24535223457774	1.72114323191264e-07	Up	1.7494996248046e-08	NA	NA	NA	K19327//anoctamin-10	gi|460379738|ref|XP_004235618.1|//PREDICTED: anoctamin-like protein At1g73020 [Solanum lycopersicum]
Solyc01g010135.1.1	2857	385.800526131561	134.517176046035	-1.52006471342524	0.0242213850431758	Down	0.00804791360797933	NA	GO:0046983//protein dimerization activity	GO:0009911//positive regulation of flower development	K11253//histone H3;K07953//GTP-binding protein SAR1 [EC:3.6.5.-]	gi|460365057|ref|XP_004228422.1|//PREDICTED: transcription factor bHLH49-like [Solanum lycopersicum]
Solyc03g058910.3.1	1920	65.6468006374261	15.0785185683383	-2.12223000772544	0.00177599169320136	Down	0.000418709835228069	NA	GO:0043169//cation binding;GO:0016837//carbon-oxygen lyase activity, acting on polysaccharides	NA	K01728//pectate lyase [EC:4.2.2.2]	gi|823683807|ref|NP_001296315.1|//probable pectate lyase P56 precursor [Solanum lycopersicum]
Solyc02g091140.3.1	1559	1532.40849337223	480.205843149614	-1.67407606351632	0.00563389322987507	Down	0.00153069359447441	NA	NA	NA	K12844//U4/U6 small nuclear ribonucleoprotein PRP31;K18848//indole-3-acetate O-methyltransferase [EC:2.1.1.278]	gi|460372391|ref|XP_004232014.1|//PREDICTED: probable S-adenosylmethionine-dependent methyltransferase At5g38780 [Solanum lycopersicum]
Solyc05g056040.3.1	3836	628.167031837622	2093.5460251824	1.7367285021339	1.29723309668413e-06	Up	1.55698917970885e-07	GO:0043231//intracellular membrane-bounded organelle	GO:0003676//nucleic acid binding	GO:0009719//response to endogenous stimulus;GO:0006351//transcription, DNA-templated	K14486//auxin response factor	gi|942429581|ref|NP_001303697.1|//auxin response factor 13 isoform 1 [Solanum lycopersicum]
Solyc10g086400.2.1	1473	1343.98314422532	3276.58805594682	1.28567925919561	1.32482150250988e-06	Up	1.593064770798e-07	NA	NA	NA	K12881//THO complex subunit 4	gi|460408384|ref|XP_004249625.1|//PREDICTED: THO complex subunit 4A [Solanum lycopersicum]
Solyc03g113790.3.1	2112	2542.49966321523	1069.49131016231	-1.24932282262488	0.0489066490492537	Down	0.0182224118046944	GO:0005829//cytosol;GO:0005777//peroxisome	GO:0016779//nucleotidyltransferase activity;GO:0008905//mannose-phosphate guanylyltransferase activity	GO:0008152//metabolic process;GO:0009058//biosynthetic process	K00966//mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]	gi|460380814|ref|XP_004236149.1|//PREDICTED: mannose-1-phosphate guanyltransferase alpha [Solanum lycopersicum]
Solyc03g123690.1.1	435	0.367344281869682	6.73414184251542	4.19628938652057	0.00846129111971835	Up	0.00241841286364993	NA	NA	NA	K16286//E3 ubiquitin-protein ligase EL5 [EC:2.3.2.27]	gi|723684634|ref|XP_010318447.1|//PREDICTED: putative RING-H2 finger protein ATL50 [Solanum lycopersicum]
Solyc03g031420.1.1	1776	203.532095699857	570.359178921483	1.48661441445642	0.00015650631491387	Up	2.87659400193937e-05	NA	NA	NA	K15631//molybdenum cofactor sulfurtransferase [EC:2.8.1.9]	gi|460377368|ref|XP_004234465.1|//PREDICTED: molybdenum cofactor sulfurase-like [Solanum lycopersicum]
Solyc10g078610.1.1	876	2.13032317371137	20.549959549184	3.26999134258951	0.00109474294282789	Up	0.000245611218610447	NA	NA	NA	K09286//EREBP-like factor	gi|460407432|ref|XP_004249156.1|//PREDICTED: ethylene-responsive transcription factor RAP2-11-like [Solanum lycopersicum]
Solyc04g074380.3.1	4614	6.70437882032334	49.9674865622419	2.89781407657046	0.0431482800275864	Up	0.0157262517559915	NA	GO:0016757//transferase activity, transferring glycosyl groups	NA	K13030//cyanohydrin beta-glucosyltransferase [EC:2.4.1.85]	gi|460384457|ref|XP_004237928.1|//PREDICTED: 7-deoxyloganetin glucosyltransferase-like [Solanum lycopersicum];gi|743928705|ref|XP_011008563.1|//PREDICTED: uncharacterized protein LOC105113904 [Populus euphratica]
Solyc02g063510.1.1	993	168.502499960928	36.5460775554438	-2.20498151893036	3.2623253399064e-09	Down	2.50134308341563e-10	NA	NA	NA	NA	gi|460376337|ref|XP_004233955.1|//PREDICTED: uncharacterized protein LOC101267773 [Solanum lycopersicum]
Solyc02g092230.3.1	3139	272.955460333098	880.126392007228	1.68904516149413	2.40996405803929e-06	Up	3.04524308809945e-07	NA	NA	NA	K07297//adiponectin receptor	gi|970005530|ref|XP_015063609.1|//PREDICTED: heptahelical transmembrane protein 4-like [Solanum pennellii]
Solyc12g007010.2.1	1825	5424.62531152623	1416.49670040675	-1.93719625039773	7.0790605896136e-08	Down	6.73919813100982e-09	NA	NA	NA	K03593//ATP-binding protein involved in chromosome partitioning	gi|460412420|ref|XP_004251599.1|//PREDICTED: fe-S cluster assembly factor HCF101, chloroplastic isoform X1 [Solanum lycopersicum];gi|565373790|ref|XP_006353451.1|//PREDICTED: fe-S cluster assembly factor HCF101, chloroplastic isoform X2 [Solanum tuberosum];gi|460412422|ref|XP_004251600.1|//PREDICTED: fe-S cluster assembly factor HCF101, chloroplastic isoform X2 [Solanum lycopersicum]
Solyc08g078100.1.1	1848	161.607962911099	43.2655791433688	-1.90120666627208	0.000243984924520231	Down	4.67270963987233e-05	NA	NA	NA	K03294//basic amino acid/polyamine antiporter, APA family;K13863//solute carrier family 7 (cationic amino acid transporter), member 1;K11584//serine/threonine-protein phosphatase 2A regulatory subunit B'	gi|460400579|ref|XP_004245811.1|//PREDICTED: probable polyamine transporter At1g31830 [Solanum lycopersicum];gi|698528040|ref|XP_009760868.1|//PREDICTED: probable polyamine transporter At1g31830 [Nicotiana sylvestris]
Solyc06g074450.2.1	2363	339.173472921255	739.556215902761	1.12463647533511	0.0201569308537973	Up	0.00649758230295359	NA	NA	NA	K20553	gi|970036214|ref|XP_015079436.1|//PREDICTED: uncharacterized protein LOC107023299 [Solanum pennellii]
Solyc01g095460.3.1	1940	406.046207152527	1136.31971648395	1.48465299328401	0.00069603662520193	Up	0.00014860957913958	NA	GO:0003677//DNA binding	GO:0006351//transcription, DNA-templated	K09060//plant G-box-binding factor	gi|460368237|ref|XP_004229974.1|//PREDICTED: transcriptional activator TAF-1 isoform X2 [Solanum lycopersicum]
Solyc02g081130.2.1	1602	42.5159793030874	1.13071951579721	-5.23269216243967	6.95870983763308e-07	Down	7.85928537648287e-08	NA	NA	NA	K03283//heat shock 70kDa protein 1/8;K11446//histone demethylase JARID1 [EC:1.14.11.-]	gi|723673735|ref|XP_010316566.1|//PREDICTED: BAH and coiled-coil domain-containing protein 1 [Solanum lycopersicum]
Solyc12g014250.2.1	3391	3909.90789872846	1010.42563609228	-1.95217147584856	5.98993615451633e-07	Down	6.69368890384671e-08	GO:0044424//intracellular part;GO:0005737//cytoplasm	GO:0008964//phosphoenolpyruvate carboxylase activity;GO:0004611//phosphoenolpyruvate carboxykinase activity	GO:0006099//tricarboxylic acid cycle;GO:0015977//carbon fixation;GO:0009060//aerobic respiration;GO:0071704//organic substance metabolic process;GO:0015979//photosynthesis	K01595//phosphoenolpyruvate carboxylase [EC:4.1.1.31]	gi|747100282|ref|XP_011098224.1|//PREDICTED: phosphoenolpyruvate carboxylase [Sesamum indicum];gi|460413019|ref|XP_004251893.1|//PREDICTED: phosphoenolpyruvate carboxylase [Solanum lycopersicum]
Solyc04g007110.3.1	1432	684.554298924091	96.1781234951309	-2.83138429717965	1.04431266949596e-10	Down	6.3060478775289e-12	NA	NA	NA	NA	gi|723690454|ref|XP_010319423.1|//PREDICTED: uncharacterized protein LOC101257359 [Solanum lycopersicum]
Solyc07g056500.3.1	872	273.713708041628	3796.97177190149	3.79410967925359	2.74622778286831e-12	Up	1.30207311011201e-13	NA	GO:0016765//transferase activity, transferring alkyl or aryl (other than methyl) groups	GO:0009755//hormone-mediated signaling pathway	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|350538579|ref|NP_001234094.1|//uncharacterized protein LOC543817 [Solanum lycopersicum]
Solyc02g087210.3.1	754	1126.44437606976	21964.2103206546	4.2853066511155	5.22645151094227e-09	Up	4.1319903290251e-10	NA	GO:0046872//metal ion binding;GO:0046914//transition metal ion binding	NA	NA	gi|987437877|ref|NP_001306921.1|//stress-associated protein 11 [Solanum lycopersicum]
Solyc01g010470.2.1	5108	1644.0293624642	208.266162391029	-2.98073570119799	1.81811334572875e-26	Down	1.77555425891207e-28	NA	NA	NA	K07199//5'-AMP-activated protein kinase, regulatory beta subunit;K07200//5'-AMP-activated protein kinase, regulatory gamma subunit	gi|565403807|ref|XP_006367347.1|//PREDICTED: uncharacterized protein LOC102605406 isoform X1 [Solanum tuberosum];gi|723654782|ref|XP_010323543.1|//PREDICTED: uncharacterized protein LOC101255617 isoform X1 [Solanum lycopersicum];gi|970001563|ref|XP_015058361.1|//PREDICTED: uncharacterized protein LOC107004606 isoform X1 [Solanum pennellii]
Solyc04g024540.1.1	2088	59.0271866683805	13.2391990082516	-2.15656374270108	0.00636140902055287	Down	0.00175704640086092	GO:0009575//chromoplast stroma;GO:0016021//integral component of membrane;GO:0009570//chloroplast stroma	GO:0005524//ATP binding	NA	NA	gi|985701326|gb|AMD38424.1|//Ycf2 (chloroplast) [Cynanchum wilfordii];gi|813424164|ref|YP_009132004.1|//Ycf2 (chloroplast) [Solanum habrochaites]
Solyc04g077450.3.1	1509	281.96413588791	93.7432459288143	-1.58872501714428	0.0184766459234027	Down	0.00586847696113443	NA	GO:0003676//nucleic acid binding	GO:0006259//DNA metabolic process	NA	gi|460384730|ref|XP_004238062.1|//PREDICTED: uncharacterized protein LOC101250596 [Solanum lycopersicum]
Solyc05g013440.3.1	4195	4422.65110614404	1056.03359110918	-2.06625570972581	0.000131995831755188	Down	2.37492127583976e-05	NA	GO:0016641//oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor;GO:0046914//transition metal ion binding;GO:0048037//cofactor binding	GO:0006807//nitrogen compound metabolic process	K00276//primary-amine oxidase [EC:1.4.3.21]	gi|460386884|ref|XP_004239124.1|//PREDICTED: copper amine oxidase 1 [Solanum lycopersicum]
Solyc02g091520.3.1	707	157.673307539082	427.028754495696	1.43739477128191	0.0196189216918887	Up	0.00629197861327755	NA	NA	NA	K12486//stromal membrane-associated protein;K01537//Ca2+-transporting ATPase [EC:3.6.3.8]	gi|460372331|ref|XP_004231984.1|//PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD11 [Solanum lycopersicum]
Solyc02g088950.2.1	2847	1199.78548583356	557.377849310589	-1.10604890929488	0.00258763330471996	Down	0.000637552413306953	NA	NA	NA	K08739//DNA mismatch repair protein MLH3	gi|565347670|ref|XP_006340847.1|//PREDICTED: DNA mismatch repair protein MLH3 isoform X1 [Solanum tuberosum];gi|697100968|ref|XP_009593675.1|//PREDICTED: uncharacterized protein LOC104090312 [Nicotiana tomentosiformis];gi|971539159|ref|XP_015160667.1|//PREDICTED: DNA mismatch repair protein MLH3 isoform X7 [Solanum tuberosum];gi|698485889|ref|XP_009789706.1|//PREDICTED: uncharacterized protein LOC104237290 [Nicotiana sylvestris];gi|970008019|ref|XP_015064940.1|//PREDICTED: DNA mismatch repair protein MLH3-like isoform X1 [Solanum pennellii]
Solyc01g005240.3.1	2408	850.896046536157	380.626665391579	-1.16060625408997	0.00157548147246327	Down	0.000366680569332812	NA	NA	NA	K00928//aspartate kinase [EC:2.7.2.4]	gi|723656106|ref|XP_010316459.1|//PREDICTED: aspartokinase 2, chloroplastic-like isoform X1 [Solanum lycopersicum];gi|460365716|ref|XP_004228743.1|//PREDICTED: aspartokinase 2, chloroplastic-like isoform X2 [Solanum lycopersicum]
Solyc03g005900.3.1	1300	149.017130712667	19.3789553946922	-2.94291547879865	0.000130024856700712	Down	2.33558142403732e-05	NA	NA	NA	K01969//3-methylcrotonyl-CoA carboxylase beta subunit [EC:6.4.1.4];K17604//zinc finger SWIM domain-containing protein 3;K01188//beta-glucosidase [EC:3.2.1.21];K00679//phospholipid:diacylglycerol acyltransferase [EC:2.3.1.158];K10960//geranylgeranyl reductase [EC:1.3.1.83]	gi|698552183|ref|XP_009769555.1|//PREDICTED: GDSL esterase/lipase At1g29670 isoform X2 [Nicotiana sylvestris];gi|698552186|ref|XP_009769556.1|//PREDICTED: GDSL esterase/lipase At5g45670-like [Nicotiana sylvestris]
Solyc08g077780.3.1	2067	1445.94336875324	8638.46701739822	2.57876426502845	2.36795547457602e-17	Up	5.92253661637287e-19	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process	K14498//serine/threonine-protein kinase SRK2 [EC:2.7.11.1]	gi|460400623|ref|XP_004245833.1|//PREDICTED: serine/threonine-protein kinase SAPK3 [Solanum lycopersicum]
Solyc09g011820.3.1	4047	68.6243417824221	18.2796890362622	-1.90847887813113	0.0448172756791089	Down	0.0164565000266476	NA	NA	NA	K03841//fructose-1,6-bisphosphatase I [EC:3.1.3.11]	gi|723727164|ref|XP_004246854.2|//PREDICTED: putative GPI-anchored protein PB15E9.01c [Solanum lycopersicum]
Solyc01g105670.3.1	2404	768.380156232568	351.56287663573	-1.12803752442474	2.0161241979755e-06	Down	2.5055009974841e-07	NA	GO:0004674//protein serine/threonine kinase activity;GO:0005524//ATP binding;GO:0000166//nucleotide binding;GO:0004672//protein kinase activity	GO:0006468//protein phosphorylation	K13412//calcium-dependent protein kinase [EC:2.7.11.1]	gi|460369434|ref|XP_004230567.1|//PREDICTED: serine/threonine-protein kinase PEPKR2-like [Solanum lycopersicum]
Solyc08g083400.3.1	1802	14.9111101673705	76.8210132482091	2.36511331907513	1.06873489880642e-05	Up	1.52573977278536e-06	NA	NA	NA	K09287//RAV-like factor	gi|723723686|ref|XP_004246082.2|//PREDICTED: B3 domain-containing transcription factor NGA1-like [Solanum lycopersicum]
Solyc05g012850.2.1	1056	121.14159906024	1411.89652540042	3.54286809552202	6.35490853341055e-06	Up	8.68624183391102e-07	NA	NA	NA	NA	gi|460386822|ref|XP_004239095.1|//PREDICTED: uncharacterized protein LOC101256182 [Solanum lycopersicum]
Solyc07g054670.3.1	4889	134.644940257691	21.1619675419242	-2.66961434276051	2.22816349928073e-05	Down	3.4118442131524e-06	NA	GO:0050136//NADH dehydrogenase (quinone) activity;GO:0046872//metal ion binding;GO:0050662//coenzyme binding	GO:0008152//metabolic process	K17871//NADH:ubiquinone reductase (non-electrogenic) [EC:1.6.5.9]	gi|460395486|ref|XP_004243314.1|//PREDICTED: external alternative NAD(P)H-ubiquinone oxidoreductase B3, mitochondrial [Solanum lycopersicum]
Solyc01g112250.3.1	2665	1348.78399212917	2897.55190336585	1.10317518516768	0.0387032726986184	Up	0.0138219791160527	GO:0016020//membrane;GO:0005886//plasma membrane	GO:0046872//metal ion binding;GO:0004674//protein serine/threonine kinase activity;GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity;GO:0005509//calcium ion binding	GO:0006464//cellular protein modification process;GO:0006468//protein phosphorylation	K13412//calcium-dependent protein kinase [EC:2.7.11.1]	gi|460370525|ref|XP_004231103.1|//PREDICTED: calcium-dependent protein kinase 5 [Solanum lycopersicum];gi|685354644|ref|XP_009112421.1|//PREDICTED: calcium-dependent protein kinase 6-like [Brassica rapa]
Solyc06g064445.1.1	1805	62.8907106010114	15.3126722521752	-2.03812086359027	0.000690043241549875	Down	0.00014714989506884	NA	NA	NA	K19039//E3 ubiquitin-protein ligase ATL7/58/59 [EC:2.3.2.27]	gi|970031487|ref|XP_015077032.1|//PREDICTED: RING-H2 finger protein ATL7-like [Solanum pennellii];gi|697140655|ref|XP_009624430.1|//PREDICTED: uncharacterized protein LOC104115485 [Nicotiana tomentosiformis]
Solyc08g077180.3.1	2293	1151.16162316575	136.546761587939	-3.07562339823082	8.82050532039982e-12	Down	4.50099589370335e-13	NA	GO:0016301//kinase activity;GO:0031420//alkali metal ion binding	GO:0006007//glucose catabolic process;GO:0006796//phosphate-containing compound metabolic process	K00873//pyruvate kinase [EC:2.7.1.40]	gi|460400711|ref|XP_004245876.1|//PREDICTED: pyruvate kinase isozyme G, chloroplastic [Solanum lycopersicum]
Solyc01g110160.3.1	2272	1546.27692696502	44.3496153998233	-5.12373331485953	7.51597948002185e-24	Down	9.52524609813415e-26	NA	NA	NA	NA	gi|460370124|ref|XP_004230904.1|//PREDICTED: uncharacterized protein LOC101251520 isoform X1 [Solanum lycopersicum]
Solyc02g080650.3.1	1632	0.471193906184212	96.2463238668894	7.67426674638595	1.24504324623508e-10	Up	7.60168792803437e-12	NA	NA	NA	K19323//ataxin-10	gi|460373803|ref|XP_004232703.1|//PREDICTED: ataxin-10 [Solanum lycopersicum]
Solyc11g011820.2.1	1829	42.065071237993	2.81083078988101	-3.90355427533732	7.3173924982164e-06	Down	1.01463769544375e-06	NA	NA	NA	K01889//phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]	gi|460409614|ref|XP_004250233.1|//PREDICTED: uncharacterized oxidoreductase At4g09670-like [Solanum lycopersicum]
Solyc05g010423.1.1	1855	83705.7823895698	29843.475718933	-1.48791171870483	4.48091854776819e-06	Down	5.91932881067932e-07	GO:0005829//cytosol	GO:0004014//adenosylmethionine decarboxylase activity	GO:0006597//spermine biosynthetic process;GO:0006557//S-adenosylmethioninamine biosynthetic process;GO:0008295//spermidine biosynthetic process	K01611//S-adenosylmethionine decarboxylase [EC:4.1.1.50]	gi|596120317|ref|XP_007221770.1|//hypothetical protein PRUPE_ppb024585mg, partial [Prunus persica];gi|350535302|ref|NP_001234699.1|//S-adenosylmethionine decarboxylase [Solanum lycopersicum]
Solyc10g008600.3.1	1670	693.870741181159	328.842810156505	-1.07726880565785	0.0401656812600069	Down	0.0144415596180866	NA	NA	NA	NA	gi|460405364|ref|XP_004248146.1|//PREDICTED: uncharacterized protein LOC101257605 [Solanum lycopersicum]
Solyc12g100000.2.1	2384	464.483249413774	1357.48220238921	1.54723480836378	2.57293771677146e-05	Up	3.98772738420148e-06	GO:0043234//protein complex	GO:0019787//ubiquitin-like protein transferase activity	GO:0032446//protein modification by small protein conjugation	K08332//vacuolar protein 8	gi|723752730|ref|XP_010314681.1|//PREDICTED: U-box domain-containing protein 4-like [Solanum lycopersicum]
Solyc04g005490.3.1	2083	800.970091251252	2130.14367286403	1.41113046233268	8.19352837121178e-06	Up	1.15078331976763e-06	NA	NA	NA	K18470//Rho GTPase-activating protein 1	gi|723690675|ref|XP_010319462.1|//PREDICTED: protein GDAP2 homolog isoform X2 [Solanum lycopersicum];gi|460382651|ref|XP_004237051.1|//PREDICTED: protein GDAP2 homolog isoform X1 [Solanum lycopersicum]
Solyc09g089770.3.1	1985	0.363286032529636	6.18945364012666	4.09063426065962	0.0111239434694716	Up	0.00329472397526543	NA	NA	NA	K06892//feruloyl-CoA ortho-hydroxylase [EC:1.14.11.-];K13229//2,4-dihydroxy-1,4-benzoxazin-3-one-glucoside dioxygenase [EC:1.14.20.2]	gi|460404477|ref|XP_004247709.1|//PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like [Solanum lycopersicum]
Solyc03g114860.3.1	1376	789.321538163385	5991.77614637192	2.92429870391034	9.11113549215391e-09	Up	7.46808817177816e-10	GO:0044459//plasma membrane part;GO:0030312//external encapsulating structure	GO:0035251//UDP-glucosyltransferase activity	GO:0045229//external encapsulating structure organization;GO:0009250//glucan biosynthetic process	K13379//reversibly glycosylated polypeptide / UDP-arabinopyranose mutase [EC:2.4.1.- 5.4.99.30]	gi|460380655|ref|XP_004236070.1|//PREDICTED: alpha-1,4-glucan-protein synthase [UDP-forming] 2-like [Solanum lycopersicum]
Solyc09g005740.2.1	717	700.366318454029	343.247628309665	-1.02885995230227	0.00839621349238617	Down	0.00239699564403555	NA	NA	NA	K02918//large subunit ribosomal protein L35e	gi|460402484|ref|XP_004246742.1|//PREDICTED: uncharacterized protein LOC101245980 [Solanum lycopersicum]
Solyc03g110940.3.1	2164	908.0530901335	211.181677255232	-2.10429198078167	5.69708742041401e-11	Down	3.31912466009658e-12	NA	NA	NA	K08869//aarF domain-containing kinase	gi|460381230|ref|XP_004236355.1|//PREDICTED: uncharacterized aarF domain-containing protein kinase 1-like [Solanum lycopersicum]
Solyc12g096890.1.1	483	15.0088574341025	57.9675274996203	1.94943079698803	0.00356801492707138	Up	0.000916873971493593	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K08235//xyloglucan:xyloglucosyl transferase [EC:2.4.1.207]	gi|460415663|ref|XP_004253177.1|//PREDICTED: protein PHLOEM PROTEIN 2-LIKE A5-like [Solanum lycopersicum]
Solyc01g088170.4.1	4658	2258.65068115031	838.814273322834	-1.42903784760791	0.000588692957403128	Down	0.000123650097471546	GO:0005829//cytosol	GO:0016614//oxidoreductase activity, acting on CH-OH group of donors;GO:0009055//electron carrier activity;GO:0051537//2 iron, 2 sulfur cluster binding;GO:0016623//oxidoreductase activity, acting on the aldehyde or oxo group of donors, oxygen as acceptor;GO:0005506//iron ion binding;GO:0046914//transition metal ion binding;GO:0050660//flavin adenine dinucleotide binding;GO:0004854//xanthine dehydrogenase activity;GO:0051536//iron-sulfur cluster binding;GO:0004031//aldehyde oxidase activity;GO:0050662//coenzyme binding	GO:0009851//auxin biosynthetic process;GO:0055114//oxidation-reduction process;GO:0009850//auxin metabolic process;GO:0009115//xanthine catabolic process	K09842//abscisic-aldehyde oxidase [EC:1.2.3.14]	gi|350535489|ref|NP_001234453.1|//aldehyde oxidase [Solanum lycopersicum]
Solyc04g015470.3.1	2882	497.697820407615	232.430637765746	-1.09846981932896	0.0370648401299587	Down	0.0131567195675264	NA	NA	NA	K00889//1-phosphatidylinositol-4-phosphate 5-kinase [EC:2.7.1.68]	gi|723688955|ref|XP_010319199.1|//PREDICTED: phosphatidylinositol 4-phosphate 5-kinase 1-like [Solanum lycopersicum]
Solyc06g007680.1.1	2246	800.252843404554	157.129024702344	-2.34850619956162	8.06043911510529e-15	Down	2.65897145402869e-16	NA	NA	NA	K10268//F-box and leucine-rich repeat protein 2/20	gi|460389612|ref|XP_004240445.1|//PREDICTED: F-box/LRR-repeat protein 12 [Solanum lycopersicum]
Solyc02g078320.2.1	912	227.177716752862	998.567062626266	2.13603798894625	1.49820160392456e-05	Up	2.2097747676791e-06	NA	NA	NA	K10666//E3 ubiquitin-protein ligase RNF5 [EC:2.3.2.27]	gi|460374133|ref|XP_004232866.1|//PREDICTED: E3 ubiquitin-protein ligase RMA1H1-like [Solanum lycopersicum]
Solyc01g111150.2.1	1156	1216.70084993657	3588.61146008183	1.56045123420453	1.41828039089756e-09	Up	1.02876608047065e-10	GO:0043231//intracellular membrane-bounded organelle	NA	NA	K13249//translocon-associated protein subunit alpha	gi|460370162|ref|XP_004230923.1|//PREDICTED: translocon-associated protein subunit alpha-like isoform X2 [Solanum lycopersicum]
Solyc06g068290.1.1	609	87.5377410344637	0.496783030334315	-7.46114545137151	1.10006153277867e-09	Down	7.83590871157013e-11	NA	NA	NA	NA	gi|460392164|ref|XP_004241687.1|//PREDICTED: triphosphate tunel metalloenzyme 3-like [Solanum lycopersicum]
Solyc09g065900.3.1	2100	3331.9526512635	678.150863564237	-2.29668973878668	1.00146851258763e-06	Down	1.17637924335235e-07	GO:0009536//plastid	GO:0015038//glutathione disulfide oxidoreductase activity;GO:0000166//nucleotide binding;GO:0050662//coenzyme binding	GO:0006790//sulfur compound metabolic process;GO:0019725//cellular homeostasis	K00383//glutathione reductase (NADPH) [EC:1.8.1.7]	gi|970052739|ref|XP_015087986.1|//PREDICTED: glutathione reductase, chloroplastic isoform X1 [Solanum pennellii]
Solyc10g085980.2.1	1820	989.416597227938	249.245386745322	-1.98901129837425	9.97070360404675e-07	Down	1.16921997682761e-07	GO:0031224//intrinsic component of membrane	NA	NA	NA	gi|460408307|ref|XP_004249587.1|//PREDICTED: uncharacterized protein LOC101251832 [Solanum lycopersicum]
Solyc07g006320.3.1	1795	20.5760541734805	3.12809339307729	-2.71761085433369	0.0117560223584767	Down	0.00350340684195697	NA	NA	NA	NA	gi|460394112|ref|XP_004242649.1|//PREDICTED: uncharacterized protein LOC101259759 [Solanum lycopersicum]
Solyc01g102300.3.1	3918	918.742005602312	151.310256199074	-2.60215001087987	1.77988864762227e-07	Down	1.81253011230954e-08	NA	NA	NA	K12126//phytochrome-interacting factor 3	gi|723663431|ref|XP_010313958.1|//PREDICTED: transcription factor PIF3 [Solanum lycopersicum]
Solyc11g005840.2.1	2139	17.4666075975892	400.449789910157	4.5189500255473	4.07978632845256e-12	Up	1.98758041273576e-13	NA	NA	NA	K11717//cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]	gi|460408941|ref|XP_004249899.1|//PREDICTED: uncharacterized protein LOC101247180 [Solanum lycopersicum]
Solyc01g068620.3.1	1223	1275.81542337754	312.31005322409	-2.03036870912325	2.01304109029433e-08	Down	1.73180961547611e-09	NA	NA	NA	NA	gi|460366566|ref|XP_004229152.1|//PREDICTED: uncharacterized protein LOC101252111 [Solanum lycopersicum]
Solyc03g093790.3.1	860	162.285218061685	8.87004725317357	-4.1934459959062	1.113909335172e-15	Down	3.31332805079491e-17	NA	NA	NA	K01647//citrate synthase [EC:2.3.3.1]	gi|966209528|ref|NP_001304930.1|//cyclin-U4-1 [Solanum lycopersicum]
Solyc12g014270.2.1	1845	123.060988336668	47.7106676594145	-1.36698970383946	0.043896269082298	Down	0.0160528662578808	NA	NA	NA	K15502//serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A;K01599//uroporphyrinogen decarboxylase [EC:4.1.1.37]	gi|723748657|ref|XP_004251894.2|//PREDICTED: peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A-like [Solanum lycopersicum]
Solyc03g044900.3.1	664	108.676354366412	264.302641720236	1.28215276972518	0.00353636479580484	Up	0.000907422664914287	NA	NA	NA	K13448//calcium-binding protein CML	gi|460377813|ref|XP_004234682.1|//PREDICTED: probable calcium-binding protein CML41 [Solanum lycopersicum]
Solyc03g007920.3.1	1516	450.362640612499	1132.64133903217	1.33053203108685	9.39314681808763e-06	Up	1.32907355454975e-06	NA	GO:0003824//catalytic activity;GO:0016740//transferase activity	NA	NA	gi|460376872|ref|XP_004234220.1|//PREDICTED: glutaminyl-peptide cyclotransferase-like [Solanum lycopersicum]
Solyc05g005860.2.1	1384	677.363409700481	169.274280012937	-2.00056727346745	1.44046150854776e-05	Down	2.11548320548612e-06	NA	NA	NA	K07874//Ras-related protein Rab-1A;K00801//farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21];K01623//fructose-bisphosphate aldolase, class I [EC:4.1.2.13]	gi|723700364|ref|XP_004238690.2|//PREDICTED: WAT1-related protein At1g21890-like [Solanum lycopersicum]
Solyc01g073670.3.1	2779	5.31020119738855	20.8179784701539	1.97099155330756	0.02804948415056	Up	0.00953108035281783	NA	NA	NA	NA	gi|460366942|ref|XP_004229334.1|//PREDICTED: major facilitator superfamily domain-containing protein 12-like [Solanum lycopersicum]
Solyc11g044400.1.1	264	0.360951249969303	4.662003406079	3.69107415333588	0.0284349442019219	Up	0.00967898875995045	NA	NA	GO:0006952//defense response;GO:0001906//cell killing	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|53830841|gb|AAU95243.1|//osmotin-like protein [Solanum tuberosum]
Solyc04g012100.2.1	3207	7.07399805161286	76.3256243434561	3.43156975893203	3.2721653140969e-06	Up	4.24083748215108e-07	NA	NA	NA	K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|460382834|ref|XP_004237141.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Solanum lycopersicum]
Solyc06g069350.2.1	1170	76.4816767744491	31.2796359277197	-1.28989043230713	0.0359573662208415	Down	0.0126858681705779	NA	NA	NA	NA	gi|723708759|ref|XP_010322599.1|//PREDICTED: uncharacterized protein LOC101262126 isoform X2 [Solanum lycopersicum];gi|723708725|ref|XP_010322587.1|//PREDICTED: uncharacterized protein LOC101262126 isoform X1 [Solanum lycopersicum]
Solyc03g111260.3.1	3216	1295.88121709939	292.679074481571	-2.14654197719726	1.67597001074475e-06	Down	2.05610111692878e-07	NA	NA	NA	K13148//integrator complex subunit 11 [EC:3.1.27.-]	gi|723688217|ref|XP_010319059.1|//PREDICTED: uncharacterized protein LOC101264202 isoform X2 [Solanum lycopersicum]
Solyc12g099140.2.1	1363	0.808125323397329	46.1428090058737	5.83538298021602	2.37387733192733e-07	Up	2.47138787389035e-08	NA	NA	NA	K09422//myb proto-oncogene protein, plant	gi|460415172|ref|XP_004252934.1|//PREDICTED: transcription factor MYB108-like [Solanum lycopersicum]
Solyc02g072210.1.1	678	22.6690768700375	221.728368069131	3.2899958133676	3.61685505319684e-13	Up	1.51129212562757e-14	NA	NA	NA	NA	gi|723678286|ref|XP_010317344.1|//PREDICTED: uncharacterized protein LOC104646047 [Solanum lycopersicum]
Solyc02g023950.3.1	4016	200.353990427618	23.2116152187756	-3.10963242043032	0.0014286095591688	Down	0.000328610018996224	NA	NA	NA	K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1];K13415//protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1]	gi|460371472|ref|XP_004231560.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g20940 [Solanum lycopersicum]
Solyc11g013000.2.1	1199	345.052657272083	1558.16530927788	2.17495985187655	8.50094947984426e-08	Up	8.19105203719897e-09	GO:0016020//membrane	NA	NA	K20352//p24 family protein delta-1	gi|970060052|ref|XP_015056782.1|//PREDICTED: transmembrane emp24 domain-containing protein p24delta3-like [Solanum pennellii]
Solyc06g060410.3.1	1944	29.5587545778639	69.6315045100983	1.23615471111731	0.0194911463301735	Up	0.00624228154423925	NA	NA	NA	K19755//radial spoke head protein 1;K00889//1-phosphatidylinositol-4-phosphate 5-kinase [EC:2.7.1.68]	gi|460392840|ref|XP_004242021.1|//PREDICTED: radial spoke head 10 homolog B-like [Solanum lycopersicum]
Solyc08g078203.1.1	1331	899.776335116782	2047.12604715796	1.1859616073601	1.08942793340088e-06	Up	1.28970594769688e-07	NA	NA	NA	K08825//dual specificity tyrosine-phosphorylation-regulated kinase 1 [EC:2.7.12.1]	gi|460400554|ref|XP_004245799.1|//PREDICTED: deSI-like protein At4g17486 isoform X2 [Solanum lycopersicum]
Solyc04g009435.1.1	4176	18.6076326050788	93.2103444810162	2.3245955568311	3.86946528132887e-05	Up	6.19910607542547e-06	GO:0005634//nucleus	GO:0003677//DNA binding;GO:0003676//nucleic acid binding	GO:0006355//regulation of transcription, DNA-templated	K12581//CCR4-NOT transcription complex subunit 7/8;K02437//glycine cleavage system H protein;K13126//polyadenylate-binding protein;K05941//glutathione gamma-glutamylcysteinyltransferase [EC:2.3.2.15];K09286//EREBP-like factor;K01054//acylglycerol lipase [EC:3.1.1.23]	gi|350536035|ref|NP_001234482.1|//NAC domain protein [Solanum lycopersicum]
Solyc01g010520.3.1	1874	928.338528677782	266.060946331828	-1.80289423525291	2.09204643431907e-09	Down	1.55881945065e-10	NA	NA	NA	NA	gi|460365011|ref|XP_004228399.1|//PREDICTED: uncharacterized protein LOC101254226 [Solanum lycopersicum]
Solyc07g054120.2.1	1827	71.5656096760576	2.42497895718097	-4.88322234414638	1.56994233384126e-10	Down	9.75508375769114e-12	NA	NA	NA	K13466//EIX receptor 1/2	gi|723715223|ref|XP_010323736.1|//PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Solanum lycopersicum]
Solyc02g084960.1.1	750	18.8100072788795	176.624979719718	3.231117082656	4.27523288353204e-10	Up	2.86046034961235e-11	NA	NA	NA	NA	gi|723672349|ref|XP_010316386.1|//PREDICTED: uncharacterized protein LOC104645741 [Solanum lycopersicum]
Solyc07g018190.3.1	4382	62.8414989367802	287.751386727684	2.19503338272463	5.23532605475166e-06	Up	7.03689643411155e-07	NA	NA	NA	K13428//LRR receptor-like serine/threonine-protein kinase EFR [EC:2.7.11.1]	gi|565400553|ref|XP_006365789.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Solanum tuberosum]
Solyc01g103370.3.1	975	824.19106365601	1928.15431713229	1.22616979396397	1.0859541540532e-05	Up	1.55194133988369e-06	NA	GO:0032561//guanyl ribonucleotide binding;GO:0003824//catalytic activity	GO:0006810//transport;GO:0035556//intracellular signal transduction	K07874//Ras-related protein Rab-1A	gi|350538375|ref|NP_001233828.1|//small GTP-binding protein [Solanum lycopersicum]
Solyc07g006140.3.1	1220	21.7391402189906	202.479242619433	3.21940722797183	3.31041497153707e-11	Up	1.85831405514195e-12	GO:0044424//intracellular part;GO:0005737//cytoplasm	GO:0016149//translation release factor activity, codon specific;GO:0003747//translation release factor activity	GO:0006415//translational termination;GO:0006412//translation	K03265//peptide chain release factor subunit 1	gi|460394082|ref|XP_004242634.1|//PREDICTED: eukaryotic peptide chain release factor subunit 1-3-like [Solanum lycopersicum];gi|565353321|ref|XP_006343581.1|//PREDICTED: eukaryotic peptide chain release factor subunit 1-3-like [Solanum tuberosum];gi|586764174|ref|XP_006855020.1|//PREDICTED: eukaryotic peptide chain release factor subunit 1-3 [Amborella trichopoda]
Solyc08g080930.1.1	1959	0.772700763260685	38.1666004674473	5.62625705691542	6.33753500946348e-07	Up	7.11519884020576e-08	NA	GO:0016740//transferase activity	NA	K20888	gi|723724379|ref|XP_010325411.1|//PREDICTED: xyloglucan galactosyltransferase KATAMARI1 homolog [Solanum lycopersicum]
Solyc01g091730.3.1	2403	6630.43059242599	2501.42199903253	-1.40635409868748	2.1549794908222e-05	Down	3.29014313195458e-06	GO:0044439//peroxisomal part	NA	GO:0007031//peroxisome organization	K13352//peroxin-11B	gi|460367974|ref|XP_004229845.1|//PREDICTED: peroxisomal membrane protein 11D [Solanum lycopersicum]
Solyc10g009180.3.1	1760	1075.51032228924	4931.5376035252	2.19701616325903	3.47924316750108e-08	Up	3.10989455630967e-09	NA	NA	NA	K19995//secretory carrier-associated membrane protein	gi|460405276|ref|XP_004248102.1|//PREDICTED: secretory carrier-associated membrane protein 3-like [Solanum lycopersicum]
Solyc02g079180.1.1	1245	7.02270311939843	533.53927311568	6.24742421221002	1.89094126431516e-28	Up	1.50835481796423e-30	NA	NA	NA	K09419//heat shock transcription factor, other eukaryote	gi|723674304|ref|XP_010316675.1|//PREDICTED: heat stress transcription factor A-1b-like [Solanum lycopersicum]
Solyc02g038740.3.1	2014	101.465320744172	355.15597992627	1.80746605574172	7.34309372297248e-05	Up	1.24346484208528e-05	GO:0031224//intrinsic component of membrane;GO:0043231//intracellular membrane-bounded organelle;GO:0031090//organelle membrane	GO:0016616//oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;GO:0000166//nucleotide binding;GO:0048037//cofactor binding	GO:0006732//coenzyme metabolic process;GO:0006720//isoprenoid metabolic process	K00021//hydroxymethylglutaryl-CoA reductase (NADPH) [EC:1.1.1.34]	gi|822476257|ref|NP_001296119.1|//3-hydroxy-3-methylglutaryl-coenzyme A reductase 2 [Solanum lycopersicum]
Solyc03g026260.3.1	1766	1594.08207841519	390.399916789358	-2.02970126430573	3.89236823914111e-11	Down	2.20675864460028e-12	NA	NA	NA	K03781//catalase [EC:1.11.1.6]	gi|723679417|ref|XP_004234352.2|//PREDICTED: traB domain-containing protein isoform X1 [Solanum lycopersicum];gi|723679420|ref|XP_010317569.1|//PREDICTED: traB domain-containing protein isoform X2 [Solanum lycopersicum]
Solyc11g021365.1.1	1082	1277.92447888227	188.457904582838	-2.76148836723649	2.32034327118365e-09	Down	1.74017096377721e-10	NA	NA	NA	NA	gi|460410016|ref|XP_004250427.1|//PREDICTED: uncharacterized protein LOC101256243 isoform X1 [Solanum lycopersicum]
Solyc08g036625.1.1	2188	118.7613943536	2665.00775202804	4.4880018874898	1.5189812541996e-13	Up	6.01296441016839e-15	NA	NA	NA	NA	gi|565360153|ref|XP_006346837.1|//PREDICTED: protein TIFY 5A-like [Solanum tuberosum]
Solyc03g005990.3.1	1418	203.678849352094	585.514677344998	1.52340916170632	0.000123919829829184	Up	2.21252417206572e-05	NA	NA	NA	K14503//brassinosteroid resistant 1/2	gi|460376577|ref|XP_004234074.1|//PREDICTED: BES1/BZR1 homolog protein 4 isoform X1 [Solanum lycopersicum]
Solyc10g006780.3.1	4000	765.052598393299	334.533684581625	-1.19340745363166	9.56050347198281e-05	Down	1.66278922022781e-05	NA	NA	NA	K11137//telomere length regulation protein	gi|723734621|ref|XP_010327151.1|//PREDICTED: telomere length regulation protein TEL2 homolog [Solanum lycopersicum]
Solyc12g096330.2.1	2999	421.83584606548	147.144417457724	-1.51944888666921	0.00907350828069481	Down	0.00261808661103543	GO:0005737//cytoplasm	GO:0008168//methyltransferase activity	GO:0032259//methylation;GO:0006364//rRNA processing	K00783//23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:2.1.1.177]	gi|460415687|ref|XP_004253189.1|//PREDICTED: putative RNA methyltransferase At5g10620 isoform X1 [Solanum lycopersicum]
Solyc12g021280.2.1	2788	1936.3576358391	304.367651246618	-2.66945849615957	1.04099709330538e-12	Down	4.64855567981157e-14	NA	GO:0004674//protein serine/threonine kinase activity;GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process;GO:0006468//protein phosphorylation	K02206//cyclin-dependent kinase 2 [EC:2.7.11.22];K07760//cyclin-dependent kinase [EC:2.7.11.22];K08282//non-specific serine/threonine protein kinase [EC:2.7.11.1]	gi|565357824|ref|XP_006345732.1|//PREDICTED: serine/threonine-protein kinase STN7, chloroplastic [Solanum tuberosum];gi|460413278|ref|XP_004252017.1|//PREDICTED: serine/threonine-protein kinase STN7, chloroplastic [Solanum lycopersicum]
Solyc09g010780.3.1	2502	84.8962718355961	779.299516844722	3.19840481661974	2.85673695425293e-14	Up	1.0233055811231e-15	GO:0016020//membrane	GO:0003824//catalytic activity	GO:0048827//phyllome development	K01102//pyruvate dehydrogenase phosphatase [EC:3.1.3.43]	gi|460401809|ref|XP_004246408.1|//PREDICTED: probable protein phosphatase 2C 23 [Solanum lycopersicum]
Solyc01g100900.3.1	1896	381.119125683808	17.972069153004	-4.40641358536116	2.50621251901768e-13	Down	1.02105646462141e-14	NA	NA	NA	K07874//Ras-related protein Rab-1A;K00801//farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21];K01623//fructose-bisphosphate aldolase, class I [EC:4.1.2.13]	gi|460368961|ref|XP_004230333.1|//PREDICTED: WAT1-related protein At1g09380-like [Solanum lycopersicum]
Solyc02g069570.3.1	3201	1202.42627142495	479.219104195994	-1.32719110788719	4.49393437175009e-06	Down	5.93819790810126e-07	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial	gi|460374788|ref|XP_004233191.1|//PREDICTED: pentatricopeptide repeat-containing protein At1g30610, chloroplastic [Solanum lycopersicum]
Solyc08g014155.1.1	944	12.7103392644258	0.528384571656588	-4.58827038722153	0.00350159930004239	Down	0.000896283077135496	NA	NA	NA	NA	NA
Solyc10g081810.2.1	1287	41.9673639372439	12.4105421311715	-1.75770170894803	0.00664112516313916	Down	0.00184494952441017	NA	NA	NA	NA	gi|460407926|ref|XP_004249400.1|//PREDICTED: putative phosphatidylglycerol/phosphatidylinositol transfer protein DDB_G0278295 [Solanum lycopersicum]
Solyc12g021360.2.1	1662	2507.72039772754	490.792979127657	-2.35318998525262	2.68609773711833e-13	Down	1.09634599006433e-14	NA	NA	NA	K06195//ApaG protein	gi|460413284|ref|XP_004252020.1|//PREDICTED: uncharacterized protein LOC101252057 isoform X1 [Solanum lycopersicum];gi|460413288|ref|XP_004252022.1|//PREDICTED: uncharacterized protein LOC101252057 isoform X3 [Solanum lycopersicum]
Solyc12g014590.2.1	1011	27.7871862484504	8.5309440779804	-1.70364244202472	0.019579901104514	Down	0.00627800467053189	NA	NA	NA	K06911//uncharacterized protein	gi|460413075|ref|XP_004251921.1|//PREDICTED: pirin-like protein At1g50590 [Solanum lycopersicum]
Solyc01g005010.3.1	1144	532.278787167011	44.8087126859247	-3.57033088701735	5.7989652340613e-07	Down	6.46298868713407e-08	NA	NA	NA	NA	gi|460365753|ref|XP_004228761.1|//PREDICTED: protein XRI1-like [Solanum lycopersicum]
Solyc03g121590.3.1	3115	2641.49846196697	9621.77469970189	1.864946448275	2.83518907948238e-08	Up	2.49299651054828e-09	NA	NA	NA	K00889//1-phosphatidylinositol-4-phosphate 5-kinase [EC:2.7.1.68]	gi|697183307|ref|XP_009600674.1|//PREDICTED: protein ROOT HAIR DEFECTIVE 3 {ECO:0000255|HAMAP-Rule:MF_03109}-like isoform X2 [Nicotiana tomentosiformis];gi|460379698|ref|XP_004235598.1|//PREDICTED: protein ROOT HAIR DEFECTIVE 3 isoform X1 [Solanum lycopersicum]
Solyc02g092240.3.1	1215	160.016175326767	536.101494454451	1.7442884086722	1.48713663037775e-09	Up	1.08148336285485e-10	NA	NA	NA	NA	gi|460372231|ref|XP_004231935.1|//PREDICTED: uncharacterized protein LOC101265085 [Solanum lycopersicum]
Solyc11g006720.2.1	721	101.182227003781	611.570455195853	2.59556281409067	4.02825607887763e-09	Up	3.1351568110543e-10	NA	NA	NA	K01179//endoglucanase [EC:3.2.1.4];K08869//aarF domain-containing kinase;K12133//MYB-related transcription factor LHY;K17613//calcineurin-binding protein cabin-1	gi|460409043|ref|XP_004249950.1|//PREDICTED: transcription factor DIVARICATA [Solanum lycopersicum]
Solyc11g008640.1.1	525	4.62966687050026	39.2634182126843	3.08420548443471	0.000706975624020902	Up	0.000151287723926644	NA	NA	NA	K16223//protein FLOWERING LOCUS T	gi|460409297|ref|XP_004250075.1|//PREDICTED: protein FLOWERING LOCUS T-like [Solanum lycopersicum]
Solyc02g078510.3.1	2050	42.1447965371262	8.64930091565478	-2.28469908193676	0.000703987538289402	Down	0.00015059581341296	NA	NA	NA	K13065//shikimate O-hydroxycinnamoyltransferase [EC:2.3.1.133]	gi|460376079|ref|XP_004233828.1|//PREDICTED: uncharacterized protein LOC101245326 [Solanum lycopersicum]
Solyc06g082860.3.1	1705	58.7180097042327	13.1883291653905	-2.15454126709753	0.000747183933928029	Down	0.000160922497772333	NA	NA	NA	K03189//urease accessory protein	gi|460393722|ref|XP_004242458.1|//PREDICTED: cytochrome b561 and DOMON domain-containing protein At3g07570-like [Solanum lycopersicum]
Solyc04g082310.3.1	4702	2028.71870793269	582.642555689948	-1.7998858584355	6.09429446335918e-10	Down	4.17296068629447e-11	NA	NA	NA	NA	gi|460385455|ref|XP_004238419.1|//PREDICTED: uncharacterized protein LOC101256088 [Solanum lycopersicum]
Solyc06g053630.3.1	2055	867.205769012277	2536.1679948975	1.54820405302502	9.22713730613932e-07	Up	1.07273897636233e-07	NA	NA	NA	K06269//serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]	gi|460390795|ref|XP_004241010.1|//PREDICTED: serine/threonine-protein phosphatase PP1 isozyme 2 [Solanum lycopersicum]
Solyc09g098070.3.1	2186	657.940122705012	1850.03652256039	1.49152555264057	0.000110196898076098	Up	1.94491692407307e-05	NA	NA	NA	K01183//chitinase [EC:3.2.1.14];K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460405091|ref|XP_004248010.1|//PREDICTED: MACPF domain-containing protein At4g24290-like [Solanum lycopersicum]
Solyc08g083140.3.1	1667	1252.58751424859	155.026321414601	-3.01432631148485	1.83335166352791e-21	Down	2.92483417321435e-23	NA	NA	NA	K07019//uncharacterized protein	gi|460399861|ref|XP_004245455.1|//PREDICTED: embryogenesis-associated protein EMB8 [Solanum lycopersicum]
Solyc11g007770.2.1	2963	577.834803889165	1466.95186226655	1.34409252263847	0.00249001306423768	Up	0.000610976230719582	NA	NA	NA	K02367//glucuronyl/N-acetylglucosaminyl transferase EXT2 [EC:2.4.1.224 2.4.1.225]	gi|460409176|ref|XP_004250015.1|//PREDICTED: glycosyltransferase family protein 64 protein C5 [Solanum lycopersicum]
Solyc11g065770.1.1	1575	1.27189553445913	19.4215149372373	3.93260365309043	0.00266938797857292	Up	0.000660779989775711	NA	GO:0005506//iron ion binding;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K20769;K13407//fatty acid omega-hydroxylase [EC:1.14.-.-]	gi|460411081|ref|XP_004250943.1|//PREDICTED: cytochrome P450 94A2-like [Solanum lycopersicum]
Solyc08g075990.3.1	1815	1029.32527022651	218.177988491143	-2.23812148702501	7.39189159313676e-11	Down	4.37264498222306e-12	NA	NA	NA	NA	gi|460400871|ref|XP_004245955.1|//PREDICTED: protein LOW PSII ACCUMULATION 3, chloroplastic [Solanum lycopersicum]
Solyc04g008050.3.1	2907	865.549754344648	183.627543225948	-2.23683428020384	4.99061620277409e-06	Down	6.68199855821298e-07	NA	NA	GO:0009987//cellular process	K14491//two-component response regulator ARR-B family	gi|723690182|ref|XP_010319384.1|//PREDICTED: two-component response regulator ARR14 isoform X1 [Solanum lycopersicum];gi|460382404|ref|XP_004236929.1|//PREDICTED: two-component response regulator ARR14 isoform X2 [Solanum lycopersicum]
Solyc12g006980.1.1	2184	2160.14927310971	616.622939866988	-1.80867054329274	0.00529940821269224	Down	0.00142658141166182	NA	NA	NA	K20718;K02984//small subunit ribosomal protein S3Ae	gi|460413353|ref|XP_004252054.1|//PREDICTED: leucine-rich repeat extensin-like protein 4 [Solanum lycopersicum]
Solyc03g025230.3.1	2057	174.94299597093	46.6853221210336	-1.90584396331016	0.00708473794787831	Down	0.00198429703818241	GO:0044464//cell part	GO:0015291//secondary active transmembrane transporter activity	GO:0015893//drug transport	K03327//multidrug resistance protein, MATE family	gi|460377302|ref|XP_004234432.1|//PREDICTED: protein TRANSPARENT TESTA 12-like [Solanum lycopersicum]
Solyc08g061650.3.1	3450	0.525834660439856	21.9329737991091	5.38234838349812	0.000225491581675076	Up	4.28491159750834e-05	NA	NA	NA	K15082//DNA repair protein RAD7	gi|460399613|ref|XP_004245332.1|//PREDICTED: uncharacterized protein LOC101263833 isoform X1 [Solanum lycopersicum]
Solyc02g092310.3.1	3200	1207.07375144244	293.642902884583	-2.03937915196243	2.52888815196764e-06	Down	3.20777038211789e-07	NA	NA	NA	K17710//pentatricopeptide repeat domain-containing protein 1	gi|723669604|ref|XP_010316025.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g67570, chloroplastic [Solanum lycopersicum]
Solyc11g027660.1.1	393	1008.8838274634	5091.41675654752	2.33530710355134	0.0312874178351392	Up	0.0108318747895025	NA	NA	NA	NA	gi|674247896|gb|KFK40661.1|//hypothetical protein AALP_AA2G025300 [Arabis alpina]
Solyc02g088430.1.1	1730	32.2520750078743	7.14968566104512	-2.17344026276655	0.0307129235837761	Down	0.0105757413175385	NA	NA	NA	K10900//werner syndrome ATP-dependent helicase [EC:3.6.4.12]	gi|723671240|ref|XP_010316234.1|//PREDICTED: ATP-dependent DNA helicase Q-like SIM [Solanum lycopersicum];gi|971545745|ref|XP_015162994.1|//PREDICTED: ATP-dependent DNA helicase Q-like SIM isoform X3 [Solanum tuberosum];gi|971545743|ref|XP_015162993.1|//PREDICTED: ATP-dependent DNA helicase Q-like SIM isoform X2 [Solanum tuberosum]
Solyc09g091970.3.1	1419	2403.96048326382	164.738898473482	-3.86716002856442	1.81811334572875e-26	Down	1.77006439850931e-28	NA	GO:0048037//cofactor binding	GO:0008152//metabolic process	K07071//uncharacterized protein	gi|460404785|ref|XP_004247861.1|//PREDICTED: epimerase family protein SDR39U1 homolog, chloroplastic [Solanum lycopersicum]
Solyc07g040950.3.1	1010	3540.96210526359	362.370307789934	-3.28860475179782	1.22741838329136e-30	Down	8.60126196730194e-33	NA	NA	NA	K08234//glyoxylase I family protein	gi|460396355|ref|XP_004243741.1|//PREDICTED: uncharacterized protein LOC101262831 isoform X2 [Solanum lycopersicum]
Solyc06g084360.3.1	1435	2034.85777736367	936.687391795171	-1.1192884123797	0.000413237833410425	Down	8.34633803780455e-05	NA	NA	NA	K15688//E3 ubiquitin-protein ligase MUL1 [EC:2.3.2.27]	gi|723711130|ref|XP_010323033.1|//PREDICTED: mitochondrial ubiquitin ligase activator of nfkb 1-A isoform X2 [Solanum lycopersicum]
Solyc02g063420.3.1	559	55.8032957628816	6.18050758223683	-3.17455309934539	0.00320670953963994	Down	0.000811000604832899	NA	NA	NA	NA	gi|460375354|ref|XP_004233471.1|//PREDICTED: uncharacterized protein At5g65660-like [Solanum lycopersicum]
Solyc00g099580.2.1	1086	55.1788358267473	4.88791070429048	-3.49682518440004	0.000103165339829426	Down	1.80697007551243e-05	GO:0043231//intracellular membrane-bounded organelle	GO:0003677//DNA binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0006351//transcription, DNA-templated	K09338//homeobox-leucine zipper protein	gi|970018933|ref|XP_015070652.1|//PREDICTED: homeobox-leucine zipper protein MERISTEM L1-like isoform X1 [Solanum pennellii]
Solyc05g015710.3.1	1051	1032.28620209527	2564.12953411935	1.31262613107912	0.000542076783549146	Up	0.00011264641673947	NA	NA	NA	NA	gi|565371145|ref|XP_006352170.1|//PREDICTED: uncharacterized protein LOC102585391 [Solanum tuberosum];gi|460387110|ref|XP_004239232.1|//PREDICTED: uncharacterized protein LOC101249549 isoform X2 [Solanum lycopersicum]
Solyc08g076480.3.1	2696	4698.4059706276	1141.00601574242	-2.04186497830478	1.88855557404566e-07	Down	1.9323412295942e-08	NA	NA	NA	K17893//ubiquinol oxidase [EC:1.10.3.11]	gi|565372635|ref|XP_006352897.1|//PREDICTED: plastoglobulin-1, chloroplastic [Solanum tuberosum]
Solyc08g074570.1.1	1792	1119.39302186288	2347.48054543258	1.06839654238434	0.0251664650128806	Up	0.00841352410543188	NA	GO:0003676//nucleic acid binding	NA	K13101//G patch domain and KOW motifs-containing protein	gi|460401089|ref|XP_004246061.1|//PREDICTED: protein MOS2 [Solanum lycopersicum]
Solyc06g074995.1.1	260	0.385187968500317	7.29074498626522	4.24243169437095	0.0076410875956407	Up	0.00216062660282281	GO:0016021//integral component of membrane	NA	GO:0006810//transport;GO:0055085//transmembrane transport	K02575//MFS transporter, NNP family, nitrate/nitrite transporter	gi|6002601|gb|AAF00053.1|AF092655_1//putative high-affinity nitrate transporter [Solanum lycopersicum]
Solyc02g031790.2.1	2558	101.52520636827	430.579230975816	2.08444077286814	0.01945199932196	Up	0.0062239437222195	NA	NA	NA	K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|970006871|ref|XP_015064303.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Solanum pennellii];gi|460371702|ref|XP_004231674.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Solanum lycopersicum]
Solyc07g025140.3.1	1584	61.2387885378268	1.53359022568518	-5.31946079060285	2.8129697849243e-08	Down	2.47031340885703e-09	NA	GO:0016740//transferase activity	NA	K10260//F-box and WD-40 domain protein 7;K03362//F-box and WD-40 domain protein 1/11;K14963//COMPASS component SWD3;K16794//platelet-activating factor acetylhydrolase IB subunit alpha	gi|460394752|ref|XP_004242957.1|//PREDICTED: myosin heavy chain kinase B-like [Solanum lycopersicum]
Solyc03g119960.3.1	1752	643.573864454822	31.2951446708961	-4.362094988695	5.26170515239726e-05	Down	8.65706222703201e-06	NA	GO:0060089//molecular transducer activity	GO:0009314//response to radiation;GO:0023052//signaling	K10523//speckle-type POZ protein	gi|460379955|ref|XP_004235724.1|//PREDICTED: root phototropism protein 3-like [Solanum lycopersicum]
Solyc07g008570.3.1	2424	9030.53496816213	719.396691742893	-3.64995202523081	0.000905647294202138	Down	0.000199416198396444	NA	GO:0046872//metal ion binding;GO:0003993//acid phosphatase activity	GO:0016311//dephosphorylation	K14407//cleavage stimulation factor subunit 2	gi|723712984|ref|XP_010323338.1|//PREDICTED: LOW QUALITY PROTEIN: probable inactive purple acid phosphatase 27 [Solanum lycopersicum];gi|590670162|ref|XP_007037978.1|//Purple acid phosphatase 27 [Theobroma cacao]
Solyc01g098760.3.1	2270	4063.24915436037	16920.7903107102	2.05809121624582	3.09526813156202e-09	Up	2.35710183121411e-10	NA	NA	NA	K14611//solute carrier family 23 (nucleobase transporter), member 1/2;K10604//E3 ubiquitin-protein ligase MGRN1 [EC:2.3.2.27]	gi|460368646|ref|XP_004230176.1|//PREDICTED: neurogenic protein mastermind [Solanum lycopersicum];gi|723662520|ref|XP_010312580.1|//PREDICTED: probable E3 ubiquitin-protein ligase LUL4 [Solanum lycopersicum]
Solyc01g080510.3.1	1487	2683.48220411853	1036.23065581757	-1.37276115073194	2.09204340001993e-05	Down	3.18781624395463e-06	NA	NA	NA	NA	gi|460367234|ref|XP_004229480.1|//PREDICTED: uncharacterized protein At4g15545 [Solanum lycopersicum]
Solyc09g008130.3.1	2729	321.244174567049	102.494680695073	-1.6481212545721	1.1837058627506e-05	Down	1.70311041830077e-06	GO:0043527//tRNA methyltransferase complex	GO:0008176//tRNA (guanine-N7-)-methyltransferase activity;GO:0004618//phosphoglycerate kinase activity	GO:0006400//tRNA modification;GO:0006096//glycolytic process;GO:0036265//RNA (guanine-N7)-methylation	K00927//phosphoglycerate kinase [EC:2.7.2.3]	gi|460402269|ref|XP_004246636.1|//PREDICTED: phosphoglycerate kinase, cytosolic isoform X1 [Solanum lycopersicum];gi|723728221|ref|XP_010325974.1|//PREDICTED: phosphoglycerate kinase, cytosolic isoform X3 [Solanum lycopersicum]
Solyc01g111880.3.1	2264	273.412775397368	67.460558986074	-2.01896447756532	0.000505470907345844	Down	0.000104172828638556	NA	GO:0004672//protein kinase activity;GO:0005488//binding	GO:0008152//metabolic process	K14510//serine/threonine-protein kinase CTR1 [EC:2.7.11.1];K17535//serine/threonine-protein kinase TNNI3K [EC:2.7.11.1];K04365//B-Raf proto-oncogene serine/threonine-protein kinase [EC:2.7.11.1]	gi|460370455|ref|XP_004231068.1|//PREDICTED: serine/threonine-protein kinase HT1 isoform X2 [Solanum lycopersicum];gi|460370453|ref|XP_004231067.1|//PREDICTED: serine/threonine-protein kinase HT1 isoform X1 [Solanum lycopersicum]
Solyc11g021300.1.1	534	428.293998520296	197.455942103182	-1.11707067764962	0.00316559370969241	Down	0.00079942214787409	GO:0031224//intrinsic component of membrane;GO:0009941//chloroplast envelope	NA	NA	NA	gi|544163672|ref|YP_008563147.1|//hypothetical chloroplast RF1 (chloroplast) [Solanum lycopersicum]
Solyc07g053050.1.1	351	170.112517353272	464.899198960148	1.45042863760768	0.0167407239976117	Up	0.00523163224973822	NA	GO:0046872//metal ion binding	NA	K16465//centrin-1	gi|460395716|ref|XP_004243427.1|//PREDICTED: calcium-binding protein PBP1-like [Solanum lycopersicum]
Solyc09g090970.3.1	1235	28.1010479677319	1411.18866369883	5.6501431327956	2.99676145824068e-14	Up	1.0823996768433e-15	GO:0005634//nucleus;GO:0005737//cytoplasm	GO:0010427//abscisic acid binding;GO:0004864//protein phosphatase inhibitor activity;GO:0004872//receptor activity	GO:0080163//regulation of protein serine/threonine phosphatase activity;GO:0009738//abscisic acid-activated signaling pathway;GO:0006952//defense response;GO:0006950//response to stress;GO:0043086//negative regulation of catalytic activity;GO:0009607//response to biotic stimulus	K14496//abscisic acid receptor PYR/PYL family	gi|568786980|ref|NP_001275580.1|//pathogenesis-related protein STH-2-like [Solanum lycopersicum];gi|806776543|ref|NP_001234352.2|//TSI-1 protein [Solanum lycopersicum]
Solyc05g052340.3.1	2243	14.3738715012758	0.914597693951256	-3.97416760211425	0.00699534104057612	Down	0.00195404375123295	NA	NA	NA	K05909//laccase [EC:1.10.3.2]	gi|970027507|ref|XP_015075054.1|//PREDICTED: laccase-12-like [Solanum pennellii]
Solyc09g011870.2.1	1163	354.378098308351	7144.56088701167	4.33348399571087	2.60752280830296e-09	Up	1.96915208350298e-10	NA	NA	NA	K15227//arogenate dehydrogenase (NADP+), plant [EC:1.3.1.78]	gi|460401710|ref|XP_004246360.1|//PREDICTED: arogenate dehydrogenase 2, chloroplastic-like [Solanum lycopersicum]
Solyc03g121700.3.1	1266	635.018112176504	1433.26089371426	1.17443159793441	0.000109433520408776	Up	1.92940417300399e-05	GO:0043231//intracellular membrane-bounded organelle	NA	GO:0034728//nucleosome organization	K11279//nucleosome assembly protein 1-like 1	gi|723684910|ref|XP_010318498.1|//PREDICTED: nucleosome assembly protein 1;4 isoform X1 [Solanum lycopersicum]
Solyc08g005525.1.1	1381	8.91620691541472	59.3856855214401	2.73561321976569	0.00132418157162727	Up	0.000302318925235463	NA	NA	NA	NA	NA
Solyc03g051780.2.1	2046	684.715646000332	270.745561927548	-1.33856728959991	1.41753043535222e-05	Down	2.07671021559726e-06	GO:0005576//extracellular region	GO:0004650//polygalacturonase activity	GO:0005975//carbohydrate metabolic process;GO:0071555//cell wall organization	K01184//polygalacturonase [EC:3.2.1.15];K01213//galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]	gi|460377949|ref|XP_004234748.1|//PREDICTED: probable polygalacturonase isoform X1 [Solanum lycopersicum];gi|698509048|ref|XP_009799757.1|//PREDICTED: probable polygalacturonase At3g15720 isoform X1 [Nicotiana sylvestris]
Solyc01g059870.4.1	4190	1424.6741686716	247.765501774241	-2.52358477473571	1.05373705026432e-08	Down	8.7156795681248e-10	GO:0044464//cell part	GO:0032559//adenyl ribonucleotide binding;GO:0042802//identical protein binding;GO:0004930//G-protein coupled receptor activity;GO:0004673//protein histidine kinase activity	GO:0007602//phototransduction;GO:0006468//protein phosphorylation;GO:0006351//transcription, DNA-templated	K12121//phytochrome B	gi|807145196|ref|NP_001293131.1|//phytochrome B1 [Solanum lycopersicum]
Solyc08g083100.2.1	2445	56.8415664116498	12.3128426977514	-2.20678243319894	0.00145962119022392	Down	0.00033690374702343	NA	NA	NA	K07019//uncharacterized protein	gi|723723773|ref|XP_010325321.1|//PREDICTED: embryogenesis-associated protein EMB8-like isoform X1 [Solanum lycopersicum]
Solyc03g115940.3.1	3559	3529.33692175259	761.915790273506	-2.21169370126213	1.87069706637774e-08	Down	1.6016815124011e-09	NA	NA	NA	K16222//Dof zinc finger protein DOF5.5	gi|460380496|ref|XP_004235992.1|//PREDICTED: cyclic dof factor 1-like [Solanum lycopersicum]
Solyc01g087690.2.1	1859	350.625414479892	15.4515953315202	-4.50410286622667	8.62555418459262e-13	Down	3.81314569216e-14	NA	NA	NA	K03086//RNA polymerase primary sigma factor	gi|723660022|ref|XP_010324734.1|//PREDICTED: RNA polymerase sigma factor sigD, chloroplastic isoform X3 [Solanum lycopersicum];gi|723660016|ref|XP_010324724.1|//PREDICTED: RNA polymerase sigma factor sigD, chloroplastic isoform X1 [Solanum lycopersicum]
Solyc08g066850.3.1	3074	1468.44434476858	451.172718254487	-1.70253684953087	5.51128798650912e-09	Down	4.37977709379658e-10	NA	NA	NA	K01759//lactoylglutathione lyase [EC:4.4.1.5]	gi|460399305|ref|XP_004245182.1|//PREDICTED: putative lactoylglutathione lyase isoform X4 [Solanum lycopersicum]
Solyc08g081555.1.1	816	47.7737977631254	280.201577751259	2.55217360620673	1.37945858043369e-05	Up	2.01355293013953e-06	NA	GO:0016846//carbon-sulfur lyase activity;GO:0048037//cofactor binding;GO:0016740//transferase activity	GO:0008652//cellular amino acid biosynthetic process	K20772	gi|806638517|ref|NP_001233922.2|//1-aminocyclopropane-1-carboxylate synthase [Solanum lycopersicum]
Solyc07g054100.2.1	1082	96.5389098766768	32.1256727745352	-1.58738386838927	0.00637600759711265	Down	0.0017620292353136	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial	gi|723715217|ref|XP_004243348.2|//PREDICTED: pentatricopeptide repeat-containing protein At2g20710, mitochondrial-like [Solanum lycopersicum];gi|970040327|ref|XP_015081543.1|//PREDICTED: uncharacterized protein LOC107025263 [Solanum pennellii]
Solyc02g062690.3.1	1387	1131.65500555408	165.935385397249	-2.76974073149068	0.000948830494231709	Down	0.000210151736869122	NA	NA	NA	K16189//phytochrome-interacting factor 4;K11253//histone H3;K12126//phytochrome-interacting factor 3	gi|460375455|ref|XP_004233521.1|//PREDICTED: transcription factor HBI1 [Solanum lycopersicum]
Solyc04g074270.3.1	5083	2746.59017369658	9239.15528507864	1.75011929738743	5.10741439711006e-05	Up	8.37435329881289e-06	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K19750//dynein assembly factor 1, axonemal;K17550//protein phosphatase 1 regulatory subunit 7	gi|460384439|ref|XP_004237919.1|//PREDICTED: uncharacterized protein LOC101256969 [Solanum lycopersicum]
Solyc01g108640.1.1	1137	44.5359547651805	15.0299186913077	-1.56713331838382	0.00638921671118552	Down	0.00176639407883044	NA	NA	NA	K21026	gi|460371156|ref|XP_004231411.1|//PREDICTED: GDSL esterase/lipase At1g28650-like [Solanum lycopersicum]
Solyc06g076450.3.1	1193	66.8730425030414	1448.00088261441	4.43649391489469	1.89392412333111e-17	Up	4.64515458905573e-19	GO:0016020//membrane;GO:0005622//intracellular	GO:0032561//guanyl ribonucleotide binding;GO:0005525//GTP binding	GO:0006810//transport;GO:0007264//small GTPase mediated signal transduction;GO:0035556//intracellular signal transduction	K07904//Ras-related protein Rab-11A	gi|460391194|ref|XP_004241208.1|//PREDICTED: ras-related protein Rab11A [Solanum lycopersicum]
Solyc01g111560.3.1	1418	1976.64068244401	706.63812095835	-1.48400715360235	0.00109200207609029	Down	0.000244874179579513	GO:0044464//cell part	GO:0032561//guanyl ribonucleotide binding	GO:0035556//intracellular signal transduction	K04392//Ras-related C3 botulinum toxin substrate 1	gi|460370399|ref|XP_004231040.1|//PREDICTED: rac-like GTP-binding protein 5 [Solanum lycopersicum]
Solyc01g095050.3.1	676	3148.68084709665	8606.27085618707	1.45064071331963	7.29746111073701e-06	Up	1.01133689800407e-06	NA	NA	NA	K03251//translation initiation factor 3 subunit D	gi|460368183|ref|XP_004229948.1|//PREDICTED: uncharacterized protein LOC101266760 [Solanum lycopersicum]
Solyc01g009780.3.1	807	437.156764196697	4097.28363288732	3.22844513894526	2.43679820641565e-15	Up	7.52075784595258e-17	NA	NA	NA	K19363//lipopolysaccharide-induced tumor necrosis factor-alpha factor	gi|460365089|ref|XP_004228438.1|//PREDICTED: uncharacterized protein LOC101266147 [Solanum lycopersicum]
Solyc12g056180.2.1	2047	1.51528912632851	31.2242253024681	4.36500077786691	4.24681676178401e-05	Up	6.8479682836878e-06	NA	GO:0016846//carbon-sulfur lyase activity;GO:0048037//cofactor binding;GO:0016740//transferase activity	GO:0008652//cellular amino acid biosynthetic process	K20772;K01762//1-aminocyclopropane-1-carboxylate synthase [EC:4.4.1.14]	gi|460414586|ref|XP_004252649.1|//PREDICTED: 1-aminocyclopropane-1-carboxylate synthase-like [Solanum lycopersicum]
Solyc06g005910.3.1	1726	732.241451845748	93.6362256301237	-2.96718075890848	0.000644210904550475	Down	0.000136559840993684	GO:0032991//macromolecular complex;GO:0005874//microtubule;GO:0015630//microtubule cytoskeleton;GO:0005737//cytoplasm	GO:0032561//guanyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity;GO:0005525//GTP binding;GO:0005200//structural constituent of cytoskeleton;GO:0003924//GTPase activity	GO:0007017//microtubule-based process;GO:0009207//purine ribonucleoside triphosphate catabolic process;GO:0043623//cellular protein complex assembly	K07375//tubulin beta	gi|460389502|ref|XP_004240391.1|//PREDICTED: tubulin beta-8 chain-like [Solanum lycopersicum];gi|706714767|ref|NP_001289638.1|//tubulin beta-9 chain [Eucalyptus grandis]
Solyc10g081450.2.1	1555	279.687830183962	71.8090255028423	-1.96158039102133	9.50037467449473e-08	Down	9.2213268422485e-09	NA	NA	NA	NA	gi|460407864|ref|XP_004249369.1|//PREDICTED: uncharacterized protein LOC101262576 [Solanum lycopersicum]
Solyc09g009830.3.1	1171	3615.20863880726	250.295405960417	-3.85237519307303	1.11976634683786e-14	Down	3.78152791946884e-16	NA	NA	NA	K01674//carbonic anhydrase [EC:4.2.1.1]	gi|723727766|ref|XP_010325903.1|//PREDICTED: alpha carbonic anhydrase 1, chloroplastic [Solanum lycopersicum]
Solyc06g035970.3.1	2532	2333.70470215687	776.857925373869	-1.58689933711029	0.000387860468804428	Down	7.77492581072307e-05	GO:0015630//microtubule cytoskeleton;GO:0043234//protein complex	GO:0032561//guanyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity	GO:0006970//response to osmotic stress;GO:0007017//microtubule-based process;GO:0009207//purine ribonucleoside triphosphate catabolic process;GO:0043623//cellular protein complex assembly	K07375//tubulin beta	gi|460390215|ref|XP_004240734.1|//PREDICTED: tubulin beta-1 chain [Solanum lycopersicum]
Solyc03g098610.3.1	3144	728.606878202151	264.481559002623	-1.46197348066803	3.49881045207763e-06	Down	4.5463147591854e-07	NA	NA	NA	NA	gi|460379303|ref|XP_004235403.1|//PREDICTED: plastid division protein CDP1, chloroplastic [Solanum lycopersicum]
Solyc07g056640.1.1	507	1821.51778476438	22.8964538406705	-6.31387309722177	1.58517144985653e-10	Down	9.85562091233298e-12	NA	NA	NA	NA	NA
Solyc12g014420.2.1	1786	339.750007737164	2567.81705106448	2.91799692965126	1.85861579059016e-07	Up	1.89755056300375e-08	NA	NA	NA	K19891//glucan endo-1,3-beta-glucosidase 1/2/3 [EC:3.2.1.39]	gi|460413055|ref|XP_004251911.1|//PREDICTED: glucan endo-1,3-beta-glucosidase 13-like [Solanum lycopersicum]
Solyc01g017440.1.1	630	853.636314990947	150.503250513055	-2.50382690580482	0.026926791395164	Down	0.0091044030395681	GO:0009536//plastid	GO:0016779//nucleotidyltransferase activity;GO:0005488//binding	NA	K03040//DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]	gi|544163644|ref|YP_008563120.1|//RNA polymerase alpha subunit (chloroplast) [Solanum lycopersicum]
Solyc10g047600.1.1	2216	50.6523167049835	1207.09656203499	4.57476902363927	2.24678579728141e-31	Up	1.48233594050548e-33	NA	NA	NA	K18635//protein SPIRAL1 and related proteins;K02184//formin 2	gi|460386712|ref|XP_004239040.1|//PREDICTED: protein SPIRAL1-like 1 [Solanum lycopersicum];gi|302843366|ref|XP_002953225.1|//hypothetical protein VOLCADRAFT_63308 [Volvox carteri f. nagariensis]
Solyc01g080470.3.1	1322	419.728230089757	1000.50148367794	1.25319590225531	1.3713833159829e-08	Up	1.15679157748222e-09	NA	GO:0008168//methyltransferase activity;GO:0003676//nucleic acid binding	GO:0010467//gene expression;GO:0009451//RNA modification	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K15507//21S rRNA (GM2251-2'-O)-methyltransferase [EC:2.1.1.-]	gi|460367226|ref|XP_004229476.1|//PREDICTED: uncharacterized protein LOC101267645 [Solanum lycopersicum]
Solyc03g114350.1.1	870	381.985224456006	937.517602950238	1.29532894442312	0.0436811663919279	Up	0.0159521419355039	NA	NA	NA	NA	gi|460380725|ref|XP_004236105.1|//PREDICTED: uncharacterized protein LOC101245934 [Solanum lycopersicum]
Solyc11g005220.2.1	871	463.450608817199	1126.24697320158	1.28103572853907	3.62500456791932e-06	Up	4.72109958264131e-07	GO:0043234//protein complex	GO:0022892//substrate-specific transporter activity	GO:0015031//protein transport	K12394//AP-1 complex subunit sigma 1/2	gi|460408858|ref|XP_004249858.1|//PREDICTED: AP-1 complex subunit sigma-2 isoform X1 [Solanum lycopersicum]
Solyc01g087780.2.1	2830	823.567086426091	199.036122933861	-2.04885588601633	0.00634782111594564	Down	0.00175282014413766	NA	GO:0004175//endopeptidase activity;GO:0005515//protein binding	GO:0044092//negative regulation of molecular function;GO:0019538//protein metabolic process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13199//plasminogen activator inhibitor 1 RNA-binding protein;K12663//Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase [EC:5.3.3.-];K01183//chitinase [EC:3.2.1.14]	gi|350536855|ref|NP_001234780.1|//subtilisin-like protease [Solanum lycopersicum]
Solyc05g051480.2.1	444	32.1379094718612	251.244156385049	2.9667420496664	2.43989453355826e-05	Up	3.76515706311734e-06	NA	NA	NA	NA	gi|565401467|ref|XP_006366220.1|//PREDICTED: uncharacterized protein LOC102592896 [Solanum tuberosum]
Solyc09g090280.2.1	1730	5.69612666980178	0.369550631873122	-3.94613728348267	0.0161937318501205	Down	0.00504379094004798	NA	GO:0003824//catalytic activity	NA	K19704//protein phosphatase PTC1 [EC:3.1.3.16]	gi|723732494|ref|XP_010326769.1|//PREDICTED: putative protein phosphatase 2C-like protein 44 [Solanum lycopersicum]
Solyc04g081910.3.1	2115	847.722579985499	4211.56504617624	2.31269232778529	1.69421699808088e-06	Up	2.07956484817368e-07	NA	GO:0046872//metal ion binding;GO:0004674//protein serine/threonine kinase activity;GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0005509//calcium ion binding	GO:0006464//cellular protein modification process;GO:0006468//protein phosphorylation	K13412//calcium-dependent protein kinase [EC:2.7.11.1]	gi|698507036|ref|XP_009798869.1|//PREDICTED: calcium-dependent protein kinase 29 [Nicotiana sylvestris];gi|460385387|ref|XP_004238385.1|//PREDICTED: calcium-dependent protein kinase 29 [Solanum lycopersicum]
Solyc02g079490.3.1	1899	232.975591346438	7.94213261947832	-4.8745085511426	1.38268735795631e-14	Down	4.74673869344627e-16	NA	NA	NA	K13065//shikimate O-hydroxycinnamoyltransferase [EC:2.3.1.133];K15400//omega-hydroxypalmitate O-feruloyl transferase [EC:2.3.1.188]	gi|460373945|ref|XP_004232772.1|//PREDICTED: shikimate O-hydroxycinnamoyltransferase [Solanum lycopersicum]
Solyc03g093610.1.1	729	192.799204890643	3896.7808057866	4.33711177510695	1.09552267138555e-56	Up	8.16700962714737e-60	GO:0043231//intracellular membrane-bounded organelle	GO:0001071//nucleic acid binding transcription factor activity;GO:0003676//nucleic acid binding	GO:0003006//developmental process involved in reproduction;GO:0000160//phosphorelay signal transduction system;GO:0006950//response to stress;GO:0006351//transcription, DNA-templated	K13432//pathogenesis-related genes transcriptional activator PTI4;K09286//EREBP-like factor	gi|723683100|ref|XP_004235186.2|//PREDICTED: ethylene-responsive transcription factor 1 [Solanum lycopersicum]
Solyc06g075100.3.1	4691	4.33468966216417	45.03902494973	3.37717498091099	0.00541600822595395	Up	0.00146200728985979	NA	NA	NA	NA	gi|723707409|ref|XP_010322401.1|//PREDICTED: uncharacterized protein LOC101258666 [Solanum lycopersicum]
Solyc03g031620.3.1	2062	745.185487528948	306.75061854175	-1.28053332511131	0.0267360710169596	Down	0.00902696180377292	NA	GO:0016667//oxidoreductase activity, acting on a sulfur group of donors	GO:0006790//sulfur compound metabolic process;GO:0019725//cellular homeostasis	K05907//adenylyl-sulfate reductase (glutathione) [EC:1.8.4.9]	gi|460377382|ref|XP_004234472.1|//PREDICTED: 5'-adenylylsulfate reductase 3, chloroplastic-like [Solanum lycopersicum]
Solyc11g044840.2.1	1902	54.0931285611788	1014.06950752425	4.22856739193459	6.62237928348928e-08	Up	6.26247809833469e-09	NA	NA	NA	K10206//LL-diaminopimelate aminotransferase [EC:2.6.1.83]	gi|460410685|ref|XP_004250752.1|//PREDICTED: aminotransferase ALD1 [Solanum lycopersicum]
Solyc09g015380.1.1	606	0.458319080389955	32.8057215472582	6.16145129452609	4.47015724830866e-06	Up	5.90178059248147e-07	NA	NA	NA	K14496//abscisic acid receptor PYR/PYL family	gi|460401569|ref|XP_004246292.1|//PREDICTED: abscisic acid receptor PYL4-like [Solanum lycopersicum]
Solyc08g006470.3.1	3216	559.670062333861	4164.37066634034	2.89545000435601	6.96153033396916e-05	Up	1.17469985917245e-05	NA	NA	NA	K14816//pre-60S factor REI1	gi|460397880|ref|XP_004244493.1|//PREDICTED: zinc finger protein 622 [Solanum lycopersicum]
Solyc07g052680.1.1	456	73.7343003140078	12.227986549953	-2.59214902947331	0.0124639796409635	Down	0.00374365394166108	NA	NA	NA	NA	gi|971574063|ref|XP_015170365.1|//PREDICTED: leucine-rich repeat extensin-like protein 3 [Solanum tuberosum]
Solyc09g009850.3.1	1368	596.951377986026	1568.92945063527	1.39409514763399	3.20601035238549e-10	Up	2.10563226513465e-11	NA	NA	NA	NA	gi|460402020|ref|XP_004246513.1|//PREDICTED: mediator-associated protein 2 [Solanum lycopersicum]
Solyc07g040690.3.1	2251	597.656413632987	2258.43945379353	1.91793799958242	3.5355805605637e-06	Up	4.59804703138764e-07	NA	NA	NA	K14508//regulatory protein NPR1	gi|926657615|ref|NP_001234558.2|//non-inducible immunity 1 [Solanum lycopersicum]
Solyc08g007070.2.1	705	43.6122689724168	8.55788674745598	-2.3494075580406	0.00742304753858039	Down	0.0020942689287131	NA	NA	NA	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460397987|ref|XP_004244546.1|//PREDICTED: protein NRT1/ PTR FAMILY 7.3 [Solanum lycopersicum]
Solyc10g076840.2.1	1535	96.3013247337677	271.569154706722	1.49569207587351	0.000409947122778016	Up	8.26831624180648e-05	NA	NA	NA	K05278//flavonol synthase [EC:1.14.11.23]	gi|460407287|ref|XP_004249085.1|//PREDICTED: codeine O-demethylase-like [Solanum lycopersicum]
Solyc01g098645.1.1	2908	177.650250137056	75.986904344446	-1.22521701037751	0.0109688392294549	Down	0.00324224299573497	NA	GO:0016787//hydrolase activity	GO:0044238//primary metabolic process	K10396//kinesin family member 5;K01206//alpha-L-fucosidase [EC:3.2.1.51]	gi|460368628|ref|XP_004230167.1|//PREDICTED: GDSL esterase/lipase At1g54790 [Solanum lycopersicum]
Solyc12g049210.1.1	324	18.9871480848464	1.71989990456963	-3.46462671557314	0.000591121551122431	Down	0.000124270372309919	NA	NA	NA	NA	gi|460414308|ref|XP_004252514.1|//PREDICTED: uncharacterized protein LOC101264299 [Solanum lycopersicum]
Solyc07g064260.2.1	2153	44.4685166821895	9.7298225287591	-2.19229888640523	0.0431032725098296	Down	0.0157066345629974	NA	NA	NA	K10278;K06911//uncharacterized protein;K05350//beta-glucosidase [EC:3.2.1.21];K00423//L-ascorbate oxidase [EC:1.10.3.3]	gi|460397178|ref|XP_004244145.1|//PREDICTED: F-box/LRR-repeat protein At4g14103 [Solanum lycopersicum]
Solyc10g011880.1.1	618	161.299638283799	440.173346512635	1.44832858620289	0.000462304815264931	Up	9.44323239768832e-05	NA	NA	NA	K19041//E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27]	gi|460405202|ref|XP_004248065.1|//PREDICTED: RING-H2 finger protein ATL67-like [Solanum lycopersicum]
Solyc01g107240.3.1	1588	88.3622871359836	302.094228525184	1.77349595534824	6.58241166999843e-06	Up	9.02664847693612e-07	NA	NA	NA	K13348//protein Mpv17	gi|460369728|ref|XP_004230709.1|//PREDICTED: PXMP2/4 family protein 4 [Solanum lycopersicum]
Solyc04g008690.3.1	1694	529.057002179421	236.640788724679	-1.16072440491463	1.63392485713919e-05	Down	2.42579495526517e-06	NA	NA	NA	K15744//zeta-carotene isomerase [EC:5.2.1.12]	gi|723689999|ref|XP_010319358.1|//PREDICTED: uncharacterized protein LOC101250883 isoform X2 [Solanum lycopersicum];gi|460382313|ref|XP_004236884.1|//PREDICTED: uncharacterized protein LOC101250883 isoform X4 [Solanum lycopersicum]
Solyc07g015980.3.1	2325	253.818781586919	76.4159739116985	-1.73185267256727	2.64066774459646e-05	Down	4.10155900243531e-06	NA	NA	NA	NA	gi|460394587|ref|XP_004242883.1|//PREDICTED: uncharacterized protein LOC101254006 [Solanum lycopersicum]
Solyc04g081550.3.1	1398	802.211156730508	2600.00409573163	1.69645996025478	0.0140095004963334	Up	0.00427679324082939	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K12173//BRCA1-A complex subunit BRE	gi|460385348|ref|XP_004238366.1|//PREDICTED: thaumatin-like protein 1b [Solanum lycopersicum]
Solyc03g006530.3.1	5004	55.7891344628824	12.9942647753716	-2.10210916153501	0.000543944682276154	Down	0.000113075126474359	NA	NA	NA	K05747//Wiskott-Aldrich syndrome protein;K02184//formin 2	gi|723679366|ref|XP_010317515.1|//PREDICTED: uncharacterized protein LOC101261888 [Solanum lycopersicum]
Solyc07g038190.3.1	885	121.909466809055	27.600042841123	-2.1430677504696	0.00296596984192822	Down	0.00074242637612948	NA	NA	NA	NA	gi|460396405|ref|XP_004243764.1|//PREDICTED: uncharacterized protein LOC101246156 [Solanum lycopersicum]
Solyc09g082980.3.1	2088	1521.48272499389	208.89518469266	-2.86462681160694	3.05405578060659e-07	Down	3.23870161615691e-08	NA	NA	NA	NA	gi|460404298|ref|XP_004247620.1|//PREDICTED: uncharacterized protein LOC101261455 [Solanum lycopersicum]
Solyc04g071880.3.1	3050	1276.87643079152	3545.74544801044	1.47347005213019	6.81248043317012e-07	Up	7.68651344535782e-08	GO:0043231//intracellular membrane-bounded organelle;GO:0016021//integral component of membrane	GO:0046872//metal ion binding;GO:0015405//P-P-bond-hydrolysis-driven transmembrane transporter activity;GO:0016462//pyrophosphatase activity	GO:0006818//hydrogen transport	K01507//inorganic pyrophosphatase [EC:3.6.1.1]	gi|567757499|ref|NP_001274711.1|//pyrophosphate-energized membrane proton pump 3-like [Solanum lycopersicum]
Solyc03g123680.1.1	723	80.512283225781	1025.52167157703	3.67100526685676	6.16972976438039e-06	Up	8.41473132841355e-07	NA	GO:0046872//metal ion binding	NA	K16286//E3 ubiquitin-protein ligase EL5 [EC:2.3.2.27]	gi|460379545|ref|XP_004235522.1|//PREDICTED: RING-H2 finger protein ATL3-like [Solanum lycopersicum]
Solyc12g014350.2.1	2108	159.449127241919	2064.98003480258	3.69495972704557	6.93809956714914e-19	Up	1.44048063922099e-20	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|970068885|ref|XP_015061572.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53430 [Solanum pennellii]
Solyc09g011060.2.1	2716	13.5909247019033	187.615906083927	3.78706662186573	0.0041854544710186	Up	0.00109550698134384	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|914726381|gb|AKV93711.1|//clade IV lectin receptor kinase [Solanum lycopersicum];gi|723727349|ref|XP_010325846.1|//PREDICTED: L-type lectin-domain containing receptor kinase IV.1 isoform X2 [Solanum lycopersicum]
Solyc00g257110.3.1	1854	0.910551961090273	8.33651336377579	3.19463086897691	0.0490724228314569	Up	0.0182969824654489	GO:0031224//intrinsic component of membrane	GO:0042625//ATPase coupled ion transmembrane transporter activity;GO:0032559//adenyl ribonucleotide binding	GO:0009206//purine ribonucleoside triphosphate biosynthetic process;GO:0006811//ion transport;GO:0009207//purine ribonucleoside triphosphate catabolic process	K01535//H+-transporting ATPase [EC:3.6.3.6]	gi|723754873|ref|XP_004253510.2|//PREDICTED: ATPase 8, plasma membrane-type-like [Solanum lycopersicum]
Solyc12g056850.2.1	1208	1554.72344312579	474.37135655089	-1.71256916916555	1.39645521784385e-05	Down	2.04200604577361e-06	NA	GO:0005515//protein binding	NA	K09517//DnaJ homolog subfamily B member 11;K03686//molecular chaperone DnaJ;K14431//transcription factor TGA	gi|460414388|ref|XP_004252553.1|//PREDICTED: pre-mRNA-splicing factor cwf23 [Solanum lycopersicum]
Solyc04g078870.3.1	3425	665.105648929621	1762.49588198154	1.40596445739552	0.000815912545907351	Up	0.000177367003419251	NA	NA	NA	K08790//serine/threonine kinase 38 [EC:2.7.11.1]	gi|460384917|ref|XP_004238153.1|//PREDICTED: serine/threonine-protein kinase tricorner [Solanum lycopersicum];gi|460384919|ref|XP_004238154.1|//PREDICTED: uncharacterized protein LOC101253889 [Solanum lycopersicum]
Solyc08g014340.3.1	1584	13936.0230160676	4750.15364499855	-1.55277282806691	7.47255182467659e-13	Down	3.27557810713421e-14	GO:0009532//plastid stroma	GO:0048037//cofactor binding;GO:0016835//carbon-oxygen lyase activity	GO:0000097//sulfur amino acid biosynthetic process;GO:0006563//L-serine metabolic process	K01738//cysteine synthase A [EC:2.5.1.47]	gi|460398434|ref|XP_004244764.1|//PREDICTED: cysteine synthase, chloroplastic/chromoplastic [Solanum lycopersicum]
Solyc05g041530.3.1	1515	2312.29642103944	573.512627681601	-2.01142919644807	5.47167623424629e-09	Down	4.34217932857848e-10	NA	GO:0070011//peptidase activity, acting on L-amino acid peptides	GO:0019538//protein metabolic process	NA	gi|723703019|ref|XP_010321573.1|//PREDICTED: uncharacterized protein LOC101255596 isoform X2 [Solanum lycopersicum];gi|460389042|ref|XP_004240168.1|//PREDICTED: uncharacterized protein LOC101255596 isoform X1 [Solanum lycopersicum]
Solyc10g084770.2.1	2583	861.833331500377	1883.85759578888	1.12820911210679	3.83844553102305e-07	Up	4.15492985764534e-08	NA	GO:0000166//nucleotide binding;GO:0004672//protein kinase activity	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460408202|ref|XP_004249535.1|//PREDICTED: probable serine/threonine-protein kinase NAK [Solanum lycopersicum];gi|565343825|ref|XP_006339025.1|//PREDICTED: probable serine/threonine-protein kinase NAK [Solanum tuberosum]
Solyc02g079340.3.1	1421	284.883878062329	108.262779657017	-1.39583664507025	0.0244025892655159	Down	0.00811448855068091	NA	NA	NA	NA	gi|460373967|ref|XP_004232783.1|//PREDICTED: uncharacterized protein LOC101249232 [Solanum lycopersicum]
Solyc08g078060.3.1	2837	233.367176653475	4535.9727775962	4.28073841824274	7.42682789832945e-18	Up	1.73019510826596e-19	NA	NA	NA	K09838//zeaxanthin epoxidase [EC:1.14.13.90]	gi|460400583|ref|XP_004245813.1|//PREDICTED: LOW QUALITY PROTEIN: zeaxanthin epoxidase, chloroplastic-like [Solanum lycopersicum]
Solyc01g095690.2.1	2870	307.905979147413	62.680391047589	-2.29640379740876	0.0296993552759947	Down	0.0101735900919335	NA	NA	NA	K17285//selenium-binding protein 1;K11000//callose synthase [EC:2.4.1.-]	gi|460370743|ref|XP_004231209.1|//PREDICTED: pentatricopeptide repeat-containing protein At4g01030, mitochondrial [Solanum lycopersicum]
Solyc02g084990.3.1	1714	1688.98053380561	226.60852703287	-2.89787864624149	5.88466149111652e-12	Down	2.93706639950985e-13	NA	GO:0043167//ion binding;GO:0016798//hydrolase activity, acting on glycosyl bonds	GO:0044238//primary metabolic process	K19355//mannan endo-1,4-beta-mannosidase [EC:3.2.1.78]	gi|460373236|ref|XP_004232427.1|//PREDICTED: mannan endo-1,4-beta-mannosidase 7 [Solanum lycopersicum]
Solyc06g050220.3.1	2554	372.053506889823	787.882489579167	1.08247035438691	0.00012195763472277	Up	2.17521724373213e-05	GO:0044464//cell part	NA	GO:0015031//protein transport	K15296//alpha-soluble NSF attachment protein	gi|566172107|ref|XP_006383546.1|//hypothetical protein POPTR_0005s18930g [Populus trichocarpa];gi|970037107|ref|XP_015079904.1|//PREDICTED: alpha-soluble NSF attachment protein [Solanum pennellii]
Solyc03g098050.3.1	645	1652.55063515293	5393.86417831259	1.7066247163892	5.85010196995623e-07	Up	6.52434214034182e-08	NA	GO:0046872//metal ion binding	NA	K02183//calmodulin	gi|350536977|ref|NP_001234786.1|//calmodulin [Solanum lycopersicum]
Solyc03g118270.1.1	1092	580.806045647696	2265.43445589286	1.96365937541673	1.26518220045423e-05	Up	1.83118476381533e-06	GO:0044464//cell part	GO:0016836//hydro-lyase activity;GO:0048037//cofactor binding	GO:0006013//mannose metabolic process	K01711//GDPmannose 4,6-dehydratase [EC:4.2.1.47]	gi|723686008|ref|XP_004235843.2|//PREDICTED: GDP-mannose 4,6 dehydratase 1 [Solanum lycopersicum]
Solyc05g008040.3.1	3820	346.390334458397	167.950678707463	-1.04436104854708	0.00893979115104942	Down	0.00257383878226874	NA	NA	NA	K03655//ATP-dependent DNA helicase RecG [EC:3.6.4.12]	gi|460386296|ref|XP_004238835.1|//PREDICTED: uncharacterized protein LOC101251978 [Solanum lycopersicum]
Solyc02g078540.3.1	1369	3399.55352338531	7042.88903071167	1.05082206744891	0.00278823759866822	Up	0.000693629705289686	NA	NA	NA	K04645//clathrin light chain B	gi|460374093|ref|XP_004232846.1|//PREDICTED: clathrin light chain 1-like [Solanum lycopersicum]
Solyc04g076370.3.1	2119	38.4537795827115	9.40934246318868	-2.03095959195236	0.0414931053769004	Down	0.0150085393833846	NA	NA	NA	K20291//conserved oligomeric Golgi complex subunit 4	gi|460384602|ref|XP_004237999.1|//PREDICTED: pentatricopeptide repeat-containing protein At2g27800, mitochondrial-like [Solanum lycopersicum]
Solyc04g014480.3.1	786	178.189573111787	25.9662714047308	-2.77870214705917	0.000117227265943489	Down	2.08385578978864e-05	NA	NA	GO:0050896//response to stimulus	K13993//HSP20 family protein	gi|460381920|ref|XP_004236689.1|//PREDICTED: 15.7 kDa heat shock protein, peroxisomal [Solanum lycopersicum]
Solyc03g078000.3.1	2240	2396.52075336822	793.290469986963	-1.59502031073	0.000797621216374357	Down	0.00017295279401972	GO:0031224//intrinsic component of membrane;GO:0005887//integral component of plasma membrane;GO:0009941//chloroplast envelope	GO:0005355//glucose transmembrane transporter activity;GO:0005351//sugar:proton symporter activity;GO:0022857//transmembrane transporter activity	GO:0071702//organic substance transport;GO:0046323//glucose import;GO:1904659//glucose transmembrane transport;GO:0015992//proton transport	K08150//MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13	gi|663071095|ref|NP_001287653.1|//vacuolar glucose transporter 1 [Solanum lycopersicum];gi|698453395|ref|XP_009779936.1|//PREDICTED: D-xylose-proton symporter-like 3, chloroplastic isoform X1 [Nicotiana sylvestris]
Solyc02g072130.3.1	2031	5127.31081274321	26947.9478242986	2.39390115083271	1.27637010596449e-10	Up	7.81198640969767e-12	GO:0016020//membrane;GO:0043231//intracellular membrane-bounded organelle	GO:0008320//protein transmembrane transporter activity	GO:0006810//transport	K10956//protein transport protein SEC61 subunit alpha	gi|460374469|ref|XP_004233033.1|//PREDICTED: protein transport protein Sec61 subunit alpha [Solanum lycopersicum]
BGI_novel_G000376	1666	78.9302445268458	0.813968254145567	-6.59946187994744	4.32835242549425e-10	Down	2.89761478909635e-11	NA	NA	NA	K11818//cytochrome P450, family 83, subfamily B, polypeptide 1 [EC:1.14.-.-];K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30]	gi|970051503|ref|XP_015087346.1|//PREDICTED: cytochrome P450 83B1-like [Solanum pennellii]
Solyc01g057200.3.1	2369	1620.46810416594	188.124273732249	-3.10665270686174	7.18173144410658e-23	Down	1.00118069185025e-24	NA	NA	NA	K17710//pentatricopeptide repeat domain-containing protein 1	gi|460366343|ref|XP_004229043.1|//PREDICTED: pentatricopeptide repeat-containing protein At3g06430, chloroplastic-like [Solanum lycopersicum]
Solyc11g009010.2.1	1858	412.648906315416	107.21126222885	-1.94445835202009	1.97953755664371e-05	Down	2.99277036295919e-06	NA	GO:0016787//hydrolase activity;GO:0003824//catalytic activity	NA	NA	gi|590707110|ref|XP_007047913.1|//Alpha/beta-Hydrolases superfamily protein isoform 1 [Theobroma cacao];gi|698485279|ref|XP_009789417.1|//PREDICTED: uncharacterized protein LOC104237044 [Nicotiana sylvestris]
Solyc07g056600.1.1	330	2.50579090594153	28.0385117390851	3.48407183426128	0.000153210624767127	Up	2.80973711739326e-05	NA	NA	GO:0006950//response to stress	NA	gi|460396419|ref|XP_004243771.1|//PREDICTED: uncharacterized protein LOC101248796 [Solanum lycopersicum]
Solyc02g084970.3.1	1534	17.4325260911401	187.394524468454	3.42622525310385	1.78369904402635e-07	Up	1.81774011717909e-08	NA	NA	NA	K07252//dolichyldiphosphatase [EC:3.6.1.43]	gi|460373238|ref|XP_004232428.1|//PREDICTED: lipid phosphate phosphatase epsilon 2, chloroplastic-like [Solanum lycopersicum]
Solyc12g014395.1.1	1208	5101.48342491601	2211.51741413621	-1.20588021687047	0.00178845398342284	Down	0.000422247932421362	NA	NA	NA	K02871//large subunit ribosomal protein L13	gi|460413083|ref|XP_004251925.1|//PREDICTED: 50S ribosomal protein L13, chloroplastic [Solanum lycopersicum]
Solyc04g078110.1.1	2301	167.778864124045	18.4340519737997	-3.18611585573875	2.04647282493967e-10	Down	1.2990693383302e-11	NA	GO:0004175//endopeptidase activity;GO:0005515//protein binding	GO:0044092//negative regulation of molecular function;GO:0019538//protein metabolic process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13199//plasminogen activator inhibitor 1 RNA-binding protein;K12663//Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase [EC:5.3.3.-];K01183//chitinase [EC:3.2.1.14];K00121//S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]	gi|350537151|ref|NP_001234282.1|//SBT1 protein precursor [Solanum lycopersicum]
Solyc02g079510.3.1	1313	107.463026861138	1367.38227948299	3.66950434946609	2.02743863428027e-20	Up	3.55942894269422e-22	NA	GO:0016209//antioxidant activity;GO:0005506//iron ion binding;GO:0003824//catalytic activity	GO:0042743//hydrogen peroxide metabolic process;GO:0006950//response to stress	K00430//peroxidase [EC:1.11.1.7]	gi|817473493|ref|NP_001295320.1|//suberization-associated anionic peroxidase 2 precursor [Solanum lycopersicum]
Solyc05g055070.3.1	3395	463.210878750814	1337.34743228662	1.52963327359848	9.87672125490017e-06	Up	1.40265051368606e-06	GO:0031090//organelle membrane	GO:0032559//adenyl ribonucleotide binding;GO:0004871//signal transducer activity;GO:0004673//protein histidine kinase activity	GO:0000160//phosphorelay signal transduction system;GO:0006468//protein phosphorylation;GO:0006351//transcription, DNA-templated	K14509//ethylene receptor [EC:2.7.13.-]	gi|460388164|ref|XP_004239739.1|//PREDICTED: protein EIN4-like [Solanum lycopersicum]
BGI_novel_G000346	6730	1.00376473221362	36.2406793007568	5.17411693034466	0.00082917418583892	Up	0.00018065167422948	NA	NA	NA	K00620//glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1];K02350//DNA polymerase zeta [EC:2.7.7.7]	gi|697122100|ref|XP_009615036.1|//PREDICTED: uncharacterized protein LOC104107832 [Nicotiana tomentosiformis]
Solyc06g062400.2.1	4012	84.5689178756295	31.9205405325695	-1.40564243643544	0.0120659885635806	Down	0.00360837282859726	NA	NA	NA	NA	gi|460393346|ref|XP_004242271.1|//PREDICTED: protein CHUP1, chloroplastic-like isoform X1 [Solanum lycopersicum]
Solyc07g008250.3.1	2992	2533.7623115644	9744.61458473646	1.94332393191791	5.95383467053054e-05	Up	9.92231803039438e-06	NA	NA	NA	K14515//EIN3-binding F-box protein	gi|460394381|ref|XP_004242782.1|//PREDICTED: EIN3-binding F-box protein 1-like [Solanum lycopersicum]
Solyc06g083270.3.1	1368	112.864345437187	495.218572132401	2.13347561924698	2.6933916275451e-07	Up	2.82510960187562e-08	GO:0031224//intrinsic component of membrane	GO:0005048//signal sequence binding;GO:0004871//signal transducer activity	GO:0035437//maintenance of protein localization in endoplasmic reticulum	K10949//ER lumen protein retaining receptor	gi|460393644|ref|XP_004242419.1|//PREDICTED: putative ER lumen protein-retaining receptor C28H8.4 [Solanum lycopersicum]
Solyc02g080540.1.1	1552	27123.245368809	2491.697161803	-3.44432917059703	8.33050326719565e-15	Down	2.75116516129989e-16	GO:0045261//proton-transporting ATP synthase complex, catalytic core F(1);GO:0033178//proton-transporting two-sector ATPase complex, catalytic domain;GO:0009534//chloroplast thylakoid	GO:0032559//adenyl ribonucleotide binding;GO:0019829//cation-transporting ATPase activity;GO:0015078//hydrogen ion transmembrane transporter activity;GO:0046933//proton-transporting ATP synthase activity, rotational mechanism;GO:0046961//proton-transporting ATPase activity, rotational mechanism	GO:0006754//ATP biosynthetic process;GO:0015986//ATP synthesis coupled proton transport;GO:0006818//hydrogen transport	K02115//F-type H+-transporting ATPase subunit gamma	gi|460373820|ref|XP_004232711.1|//PREDICTED: ATP synthase gamma chain, chloroplastic [Solanum lycopersicum];gi|970010004|ref|XP_015065901.1|//PREDICTED: ATP synthase gamma chain, chloroplastic [Solanum pennellii]
Solyc02g036470.3.1	4349	1627.1606231069	486.59185474932	-1.74157259610321	1.5732381461947e-09	Down	1.14996272725802e-10	NA	NA	NA	NA	gi|460371612|ref|XP_004231629.1|//PREDICTED: uncharacterized protein LOC101262874 [Solanum lycopersicum]
Solyc07g054490.3.1	1362	723.190743820319	351.521770828809	-1.04076217007115	0.0312380605871512	Down	0.0108066363616129	GO:0031224//intrinsic component of membrane	NA	GO:0006810//transport	K19995//secretory carrier-associated membrane protein	gi|460395504|ref|XP_004243323.1|//PREDICTED: secretory carrier-associated membrane protein 1-like [Solanum lycopersicum]
Solyc12g044270.2.1	1872	33.2617046501931	1.39343463834092	-4.57714487128183	0.000375232314957644	Down	7.48702319206899e-05	NA	GO:0005088//Ras guanyl-nucleotide exchange factor activity;GO:0016772//transferase activity, transferring phosphorus-containing groups	GO:0006796//phosphate-containing compound metabolic process	K10418//dynein light chain LC8-type	gi|460413961|ref|XP_004252343.1|//PREDICTED: rop guanine nucleotide exchange factor 12-like [Solanum lycopersicum]
Solyc07g047940.3.1	2222	437.01705186068	26.1528212136959	-4.06265108348698	1.36695736749299e-21	Down	2.16039184365971e-23	NA	GO:0005488//binding	NA	NA	gi|460395961|ref|XP_004243548.1|//PREDICTED: zinc finger CCCH domain-containing protein 18 [Solanum lycopersicum]
Solyc01g091450.3.1	2375	324.009322276886	27.9374090091103	-3.53576518977429	5.28666609540471e-08	Down	4.89491523072361e-09	NA	NA	NA	K17710//pentatricopeptide repeat domain-containing protein 1	gi|460367924|ref|XP_004229820.1|//PREDICTED: pentatricopeptide repeat-containing protein At1g01970 [Solanum lycopersicum]
Solyc06g036110.1.1	747	1214.98504489576	3523.8748243063	1.53622412152339	0.0248016802707142	Up	0.00826661044359349	NA	NA	NA	K19747//BAHD acyltransferase [EC:2.3.1.-];K05747//Wiskott-Aldrich syndrome protein;K01759//lactoylglutathione lyase [EC:4.4.1.5]	gi|460390195|ref|XP_004240724.1|//PREDICTED: uncharacterized protein LOC101263030 [Solanum lycopersicum]
Solyc01g006510.3.1	1586	2256.4025449023	734.38080986064	-1.6194242039867	0.000397759832047836	Down	7.99285542928986e-05	NA	GO:0046914//transition metal ion binding;GO:0003824//catalytic activity	GO:0008152//metabolic process	K00008//L-iditol 2-dehydrogenase [EC:1.1.1.14]	gi|350538545|ref|NP_001234092.1|//sorbitol related enzyme [Solanum lycopersicum]
Solyc02g088000.3.1	2916	5136.7440631227	1789.5162688972	-1.52128453390625	2.59843283809718e-05	Down	4.03044705076468e-06	GO:0009536//plastid	GO:0046527//glucosyltransferase activity	GO:0005982//starch metabolic process	K00703//starch synthase [EC:2.4.1.21]	gi|460372814|ref|XP_004232219.1|//PREDICTED: granule-bound starch synthase 2, chloroplastic/amyloplastic [Solanum lycopersicum]
Solyc10g051080.1.1	782	25.1183434952314	159.6348158799	2.66796210377451	1.86850676459658e-09	Up	1.38111261152341e-10	GO:0005634//nucleus	GO:0003677//DNA binding	GO:0006355//regulation of transcription, DNA-templated	NA	gi|970056721|ref|XP_015054988.1|//PREDICTED: NAC domain-containing protein 100-like [Solanum pennellii]
Solyc07g018180.2.1	3305	59.6839450336051	160.834835667427	1.43016511353774	0.00782591912160044	Up	0.00221930791252185	NA	NA	NA	K13428//LRR receptor-like serine/threonine-protein kinase EFR [EC:2.7.11.1];K20181//vacuolar protein sorting-associated protein 18	gi|697129757|ref|XP_009618941.1|//PREDICTED: putative receptor-like protein kinase At3g47110 isoform X1 [Nicotiana tomentosiformis];gi|970039833|ref|XP_015081261.1|//PREDICTED: putative receptor-like protein kinase At3g47110 [Solanum pennellii]
Solyc12g055830.2.1	1461	856.127625577621	3689.27503209892	2.10743955988846	9.4276539846833e-06	Up	1.33465893222854e-06	GO:0044424//intracellular part	GO:0046872//metal ion binding;GO:0016462//pyrophosphatase activity	GO:0006793//phosphorus metabolic process	K01507//inorganic pyrophosphatase [EC:3.6.1.1]	gi|460414519|ref|XP_004252616.1|//PREDICTED: soluble inorganic pyrophosphatase [Solanum lycopersicum]
Solyc07g062610.3.1	1873	2257.74573768085	1018.05686957395	-1.14906486823272	5.10185441431893e-05	Down	8.35792834014153e-06	NA	NA	NA	K03152//4-methyl-5(b-hydroxyethyl)-thiazole monophosphate biosynthesis	gi|460397416|ref|XP_004244263.1|//PREDICTED: protein DJ-1 homolog B [Solanum lycopersicum]
Solyc05g053490.3.1	1146	243.400738583416	104.615164085494	-1.21824155881238	0.0364212066118318	Down	0.0128861671820303	GO:0044464//cell part	GO:0035252//UDP-xylosyltransferase activity	NA	K20891	gi|460388434|ref|XP_004239872.1|//PREDICTED: xylosyltransferase 1-like [Solanum lycopersicum]
Solyc04g057860.2.1	480	11.0958304350224	0.381395638285839	-4.8625854908412	0.00109506170546317	Down	0.000245764370381459	NA	NA	NA	K02901//large subunit ribosomal protein L27e	gi|723691870|ref|XP_010319725.1|//PREDICTED: 60S ribosomal protein L27-3-like isoform X2 [Solanum lycopersicum]
Solyc05g009040.3.1	2312	178.97201750393	1472.08861310787	3.04005857467399	0.000335464832812106	Up	6.63227028938202e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|970028694|ref|XP_015075673.1|//PREDICTED: probable receptor-like protein kinase At1g67000 [Solanum pennellii]
Solyc02g087830.3.1	3303	11.1573495320221	0.68541098840733	-4.02488121919981	0.0164581006292163	Down	0.00513656167319325	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1];K09338//homeobox-leucine zipper protein	gi|723671455|ref|XP_010316258.1|//PREDICTED: probable receptor-like protein kinase At5g15080 [Solanum lycopersicum]
Solyc11g068880.2.1	2089	134.952904697084	25.366461189165	-2.41146185757796	4.03277170659211e-07	Down	4.38181359949158e-08	NA	NA	NA	K02882//large subunit ribosomal protein L18Ae;K01381//saccharopepsin [EC:3.4.23.25]	gi|970060179|ref|XP_015056847.1|//PREDICTED: aspartic proteinase nepenthesin-1-like [Solanum pennellii];gi|723745606|ref|XP_004251393.2|//PREDICTED: aspartic proteinase nepenthesin-2-like isoform X1 [Solanum lycopersicum]
Solyc07g021120.2.1	4824	263.451725630437	47.1331019517049	-2.48272609241986	5.94477273160788e-07	Down	6.63878749958894e-08	NA	NA	NA	NA	gi|723713630|ref|XP_010323423.1|//PREDICTED: CST complex subunit CTC1-like isoform X2 [Solanum lycopersicum];gi|723713633|ref|XP_010323424.1|//PREDICTED: CST complex subunit CTC1-like isoform X3 [Solanum lycopersicum]
Solyc01g066440.3.1	1146	304.305568758864	109.295121081448	-1.47729173450945	0.0042045124420383	Down	0.0011019057320699	NA	NA	NA	NA	gi|460366786|ref|XP_004229260.1|//PREDICTED: uncharacterized protein LOC101259876 [Solanum lycopersicum]
Solyc07g014640.3.1	2601	222.154723917936	69.0285724898622	-1.68629926448425	7.56520810517544e-05	Down	1.28361515188455e-05	NA	NA	NA	K18677//galacturonokinase [EC:2.7.1.44]	gi|460394563|ref|XP_004242871.1|//PREDICTED: galacturonokinase isoform X1 [Solanum lycopersicum];gi|460394565|ref|XP_004242872.1|//PREDICTED: galacturonokinase isoform X2 [Solanum lycopersicum]
Solyc04g072150.2.1	4417	29.2389313602415	2.91597079122553	-3.32584241025739	0.00106033804733503	Down	0.000237021006131082	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial;K14845//RAT1-interacting protein;K17710//pentatricopeptide repeat domain-containing protein 1	gi|460384289|ref|XP_004237845.1|//PREDICTED: pentatricopeptide repeat-containing protein At4g17616 [Solanum lycopersicum]
Solyc09g097805.1.1	674	130.953433780206	400.9234513347	1.61427291830262	0.0222590009065491	Up	0.00729134113488717	NA	NA	NA	NA	gi|723733544|ref|XP_010326962.1|//PREDICTED: cold and drought-regulated protein CORA-like [Solanum lycopersicum]
Solyc09g098300.3.1	652	2159.62741966373	4580.92900547311	1.08485776520222	1.29654033793156e-05	Up	1.88201873545203e-06	NA	NA	NA	NA	NA
Solyc06g071370.1.1	471	33.8643298892106	9.83148972719181	-1.78428450366416	0.0324139348989062	Down	0.0112714178720701	NA	NA	NA	NA	gi|723708470|ref|XP_010322556.1|//PREDICTED: uncharacterized protein LOC104648037 [Solanum lycopersicum]
Solyc02g086560.3.1	1400	519.42149837865	209.387371742556	-1.3107312918438	3.42741640339053e-08	Down	3.06229205267896e-09	NA	GO:0043169//cation binding;GO:0016829//lyase activity	GO:0009235//cobalamin metabolic process	NA	gi|460373013|ref|XP_004232317.1|//PREDICTED: uncharacterized protein LOC101257032 [Solanum lycopersicum]
Solyc10g005080.3.1	6956	6440.79858366759	94.8162320757065	-6.0859617039008	2.78478206075721e-67	Down	1.24561595083817e-70	GO:0005634//nucleus	GO:0043565//sequence-specific DNA binding	GO:0045892//negative regulation of transcription, DNA-templated;GO:0042754//negative regulation of circadian rhythm;GO:0043496//regulation of protein homodimerization activity;GO:0009409//response to cold;GO:0045893//positive regulation of transcription, DNA-templated	K12133//MYB-related transcription factor LHY	gi|460405908|ref|XP_004248416.1|//PREDICTED: protein LHY [Solanum lycopersicum]
Solyc01g088830.2.1	1461	5.36011788448164	24.2970168451692	2.18044255738287	0.029743240002989	Up	0.0101935866352545	NA	NA	NA	K19626//inversin;K15502//serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A;K06694//26S proteasome non-ATPase regulatory subunit 10	gi|723660276|ref|XP_004231139.2|//PREDICTED: ankyrin repeat-containing protein At3g12360-like [Solanum lycopersicum]
Solyc01g110300.3.1	1833	580.477758928504	1470.51787151828	1.34101162147549	0.00255333986348316	Up	0.000628627173039596	NA	NA	NA	K11247//endophilin-A	gi|460370074|ref|XP_004230879.1|//PREDICTED: intersectin-1 [Solanum lycopersicum]
Solyc06g052010.2.1	1782	203.044746677527	43.7405548282313	-2.21475427576349	0.0052370100350024	Down	0.00140705115298559	NA	NA	NA	NA	gi|460390687|ref|XP_004240959.1|//PREDICTED: protein IQ-DOMAIN 1 isoform X2 [Solanum lycopersicum]
Solyc04g079340.3.1	2502	912.608854912939	265.453702976975	-1.78153638547222	0.0245486106385868	Down	0.00817036470821312	NA	NA	NA	K20495	gi|460384976|ref|XP_004238182.1|//PREDICTED: uncharacterized protein LOC101262306 isoform X1 [Solanum lycopersicum]
Solyc04g050930.3.1	1852	2490.04258969889	162.106252484091	-3.94115877616865	1.84130131515721e-21	Down	2.94437999180871e-23	GO:0009534//chloroplast thylakoid	GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K09839//violaxanthin de-epoxidase [EC:1.23.5.1]	gi|806776481|ref|NP_001234610.2|//violaxanthin de-epoxidase [Solanum lycopersicum]
Solyc10g078590.2.1	753	1137.7844418237	4386.98661727882	1.94700304662439	0.000804961928428493	Up	0.000174776473575964	NA	NA	NA	NA	gi|460407422|ref|XP_004249151.1|//PREDICTED: uncharacterized protein LOC101247272 [Solanum lycopersicum]
Solyc07g006490.3.1	812	1693.17236924772	423.948308969104	-1.99776857455494	4.28116682661734e-09	Down	3.35274023509879e-10	NA	NA	NA	NA	gi|460394132|ref|XP_004242659.1|//PREDICTED: uncharacterized protein LOC101262532 [Solanum lycopersicum]
Solyc07g054220.1.1	1173	171.046767816824	781.704956967342	2.19223334376115	2.57280444847647e-05	Up	3.9865618355139e-06	NA	NA	NA	K09286//EREBP-like factor	gi|460395537|ref|XP_004243339.1|//PREDICTED: ethylene-responsive transcription factor ERF054 [Solanum lycopersicum]
Solyc07g008300.2.1	1658	144.897166144606	10.9214904979551	-3.72978771440658	0.000502245400456041	Down	0.000103451918999556	NA	GO:0051537//2 iron, 2 sulfur cluster binding;GO:0016708//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor;GO:0005506//iron ion binding;GO:0046914//transition metal ion binding;GO:0003824//catalytic activity;GO:0004497//monooxygenase activity;GO:0051536//iron-sulfur cluster binding	GO:0019439//aromatic compound catabolic process;GO:0044237//cellular metabolic process;GO:0055114//oxidation-reduction process	K00499//choline monooxygenase [EC:1.14.15.7]	gi|460394913|ref|XP_004243034.1|//PREDICTED: choline monooxygenase, chloroplastic-like [Solanum lycopersicum];gi|460394388|ref|XP_004242785.1|//PREDICTED: choline monooxygenase, chloroplastic-like isoform X2 [Solanum lycopersicum]
Solyc10g081260.2.1	1726	982.331469698299	312.332340668257	-1.65312795566561	0.00102584758309624	Down	0.00022835700634601	NA	NA	NA	K03327//multidrug resistance protein, MATE family	gi|723738785|ref|XP_010312180.1|//PREDICTED: protein TRANSPARENT TESTA 12-like [Solanum lycopersicum]
Solyc04g064630.3.1	1198	19.2015796044077	0.865848790731287	-4.47096608893384	0.00102802317523707	Down	0.000228917938305736	NA	NA	NA	K15382//solute carrier family 50 (sugar transporter)	gi|460384042|ref|XP_004237724.1|//PREDICTED: bidirectional sugar transporter SWEET1-like [Solanum lycopersicum]
Solyc09g098590.3.1	2738	648.618701122823	264.143217452681	-1.2960502549968	1.46795748668704e-07	Down	1.47134996335972e-08	NA	GO:0016157//sucrose synthase activity;GO:0035251//UDP-glucosyltransferase activity	GO:0005982//starch metabolic process;GO:0005984//disaccharide metabolic process;GO:0005985//sucrose metabolic process;GO:0010431//seed maturation	K13130//gem associated protein 2;K00695//sucrose synthase [EC:2.4.1.13]	gi|460405019|ref|XP_004247975.1|//PREDICTED: uncharacterized protein LOC101253626 [Solanum lycopersicum];gi|661879248|emb|CDP17108.1|//unnamed protein product [Coffea canephora];gi|460405015|ref|XP_004247973.1|//PREDICTED: sucrose synthase 2-like [Solanum lycopersicum];gi|111146896|gb|ABH07386.1|//sucrose synthase [Coffea canephora]
Solyc04g005425.1.1	1161	76.4322734626056	5.09619090207218	-3.90669071694153	0.00154765566717992	Down	0.000359396705178578	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial;K01873//valyl-tRNA synthetase [EC:6.1.1.9]	gi|460382661|ref|XP_004237056.1|//PREDICTED: putative pentatricopeptide repeat-containing protein At1g26500 [Solanum lycopersicum]
Solyc03g083440.3.1	4120	1934.98370021828	7357.28224514488	1.92685152453702	0.000462616299817584	Up	9.45131929066713e-05	NA	GO:0045181//glutamate synthase activity, NAD(P)H as acceptor;GO:0000166//nucleotide binding;GO:0046914//transition metal ion binding;GO:0050662//coenzyme binding;GO:0051540//metal cluster binding	GO:0006536//glutamate metabolic process	K00264//glutamate synthase (NADPH/NADH) [EC:1.4.1.13 1.4.1.14]	gi|723682114|ref|XP_010318008.1|//PREDICTED: glutamate synthase 1 [NADH], chloroplastic isoform X2 [Solanum lycopersicum];gi|460378389|ref|XP_004234955.1|//PREDICTED: glutamate synthase 1 [NADH], chloroplastic isoform X1 [Solanum lycopersicum];gi|971556168|ref|XP_015165627.1|//PREDICTED: glutamate synthase 1 [NADH], chloroplastic isoform X1 [Solanum tuberosum]
Solyc02g068820.2.1	2264	782.611757195504	1745.88715315452	1.15759162304886	0.0164576490619767	Up	0.0051358072889097	NA	NA	NA	K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|565393918|ref|XP_006362615.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Solanum tuberosum];gi|460376234|ref|XP_004233904.1|//PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR [Solanum lycopersicum]
Solyc03g019850.3.1	2599	409.265028505106	858.49873810715	1.06878061916801	0.0135374619395788	Up	0.00411704756094468	GO:0005737//cytoplasm	GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity;GO:0004708//MAP kinase kinase activity;GO:0004707//MAP kinase activity	GO:0009814//defense response, incompatible interaction;GO:0006464//cellular protein modification process;GO:0000187//activation of MAPK activity	K04368//mitogen-activated protein kinase kinase 1 [EC:2.7.12.2];K20607	gi|802559806|ref|XP_012066235.1|//PREDICTED: mitogen-activated protein kinase kinase 3 [Jatropha curcas];gi|723684354|ref|XP_010317547.1|//PREDICTED: mitogen-activated protein kinase kinase 3 [Solanum lycopersicum]
Solyc11g071600.2.1	4673	28.7879908013578	594.566122048234	4.36829825426462	1.85066467928274e-10	Up	1.1671852681327e-11	NA	GO:0016623//oxidoreductase activity, acting on the aldehyde or oxo group of donors, oxygen as acceptor;GO:0046914//transition metal ion binding;GO:0051536//iron-sulfur cluster binding;GO:0050662//coenzyme binding	GO:0009850//auxin metabolic process	K09842//abscisic-aldehyde oxidase [EC:1.2.3.14]	gi|350535553|ref|NP_001234456.1|//aldehyde oxidase [Solanum lycopersicum]
Solyc07g055950.3.1	2320	2746.47675598909	526.892019816768	-2.38200284780824	0.0407079632366679	Down	0.0146699190611341	NA	NA	NA	K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]	gi|460395318|ref|XP_004243231.1|//PREDICTED: protodermal factor 1 [Solanum lycopersicum]
Solyc01g073800.2.1	917	6.1241091621496	366.927126540828	5.9048497561644	5.71088705651296e-26	Up	5.8326489245734e-28	NA	NA	NA	K17609//nucleoredoxin [EC:1.8.1.8];K16219//protein N-terminal methyltransferase [EC:2.1.1.244];K20393//PRA1 family protein 3	gi|460366994|ref|XP_004229360.1|//PREDICTED: uncharacterized protein LOC101254632 [Solanum lycopersicum]
BGI_novel_G000039	13509	1295.5528004123	404.95636420233	-1.67772944906673	0.0348500494211652	Down	0.0122484387949965	NA	NA	NA	K01303//acylaminoacyl-peptidase [EC:3.4.19.1];K09493//T-complex protein 1 subunit alpha;K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|971586942|ref|XP_015160938.1|//PREDICTED: uncharacterized protein LOC107059054 [Solanum tuberosum]
Solyc09g090510.3.1	3029	2756.98261265086	1210.59108521464	-1.18737853658877	0.000409436778429807	Down	8.25649683653368e-05	NA	NA	NA	K00574//cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79]	gi|697155792|ref|XP_009586640.1|//PREDICTED: uncharacterized protein LOC104084479 isoform X1 [Nicotiana tomentosiformis];gi|460404578|ref|XP_004247758.1|//PREDICTED: uncharacterized protein LOC101260476 [Solanum lycopersicum]
Solyc05g049980.3.1	1889	541.306804761709	106.671606123733	-2.34327031395412	0.0124942260142057	Down	0.00375506725631952	NA	NA	NA	K01184//polygalacturonase [EC:3.2.1.15]	gi|971547390|ref|XP_006345582.2|//PREDICTED: probable polygalacturonase isoform X1 [Solanum tuberosum];gi|460388891|ref|XP_004240097.1|//PREDICTED: probable polygalacturonase [Solanum lycopersicum]
Solyc08g059710.3.1	1665	18.7046368401619	2359.00266202218	6.97863728084762	4.59982890829873e-61	Up	2.91475665130008e-64	NA	NA	NA	NA	gi|460398969|ref|XP_004245019.1|//PREDICTED: uncharacterized protein LOC101256695 [Solanum lycopersicum]
Solyc06g076630.3.1	1195	155.272036411707	36.9632822593353	-2.07063325640775	0.000911910859662193	Down	0.000201022842703228	NA	NA	NA	K00430//peroxidase [EC:1.11.1.7]	gi|460391152|ref|XP_004241187.1|//PREDICTED: peroxidase 47 [Solanum lycopersicum]
Solyc09g007570.2.1	1799	211.341178437907	46.606659358681	-2.18096588114288	0.000527098440620679	Down	0.000109081949542493	GO:0005634//nucleus	GO:0003677//DNA binding	GO:0006355//regulation of transcription, DNA-templated	K01179//endoglucanase [EC:3.2.1.4];K08869//aarF domain-containing kinase;K12134//circadian clock associated 1;K12133//MYB-related transcription factor LHY;K17613//calcineurin-binding protein cabin-1	gi|723728363|ref|XP_004246920.2|//PREDICTED: transcription factor DIVARICATA-like [Solanum lycopersicum]
Solyc03g116800.3.1	423	456.838093674288	42.1524278437505	-3.43799532231896	4.41039768452843e-11	Down	2.52182423142486e-12	GO:0009536//plastid	NA	NA	NA	gi|460380407|ref|XP_004235948.1|//PREDICTED: uncharacterized protein LOC101248862 [Solanum lycopersicum]
Solyc09g057880.3.1	1560	355.63106711309	95.6719500222138	-1.89421345091277	5.67535804451023e-07	Down	6.31888119835696e-08	NA	NA	GO:0006355//regulation of transcription, DNA-templated	K13963//serpin B;K17604//zinc finger SWIM domain-containing protein 3	gi|723729810|ref|XP_010326280.1|//PREDICTED: protein FAR1-RELATED SEQUENCE 2-like isoform X3 [Solanum lycopersicum];gi|460403122|ref|XP_004247049.1|//PREDICTED: protein FAR1-RELATED SEQUENCE 2-like isoform X1 [Solanum lycopersicum];gi|970048890|ref|XP_015085949.1|//PREDICTED: protein FAR1-RELATED SEQUENCE 2-like isoform X1 [Solanum pennellii]
Solyc06g062845.1.1	1569	413.970248488544	84.8456678714216	-2.28661418250237	0.0224436962953842	Down	0.00736355355568703	GO:0009536//plastid	GO:0016838//carbon-oxygen lyase activity, acting on phosphates;GO:0048037//cofactor binding	GO:0006566//threonine metabolic process	K01733//threonine synthase [EC:4.2.3.1]	gi|460392573|ref|XP_004241890.1|//PREDICTED: threonine synthase, chloroplastic-like [Solanum lycopersicum]
Solyc03g060510.3.1	1722	1511.57325904264	278.302917301319	-2.441322964625	5.87929563725851e-25	Down	6.50868795387572e-27	NA	NA	NA	K10752//histone-binding protein RBBP4	gi|460378062|ref|XP_004234798.1|//PREDICTED: uncharacterized protein LOC101260406 isoform X1 [Solanum lycopersicum];gi|723681469|ref|XP_010317891.1|//PREDICTED: uncharacterized protein LOC101260406 isoform X2 [Solanum lycopersicum]
Solyc07g006360.1.1	1440	476.867945545634	160.023378811174	-1.57530711706651	9.60959957620259e-06	Down	1.36184947028188e-06	NA	NA	NA	K19041//E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27]	gi|460394120|ref|XP_004242653.1|//PREDICTED: RING-H2 finger protein ATL13 [Solanum lycopersicum]
Solyc10g008640.3.1	2180	365.930051952427	1130.21506493803	1.62695751772049	7.32841907929229e-08	Up	6.9902431876804e-09	NA	GO:0004143//diacylglycerol kinase activity;GO:0005524//ATP binding	GO:0016310//phosphorylation;GO:0007205//protein kinase C-activating G-protein coupled receptor signaling pathway	K00901//diacylglycerol kinase (ATP) [EC:2.7.1.107]	gi|971584083|ref|XP_006365995.2|//PREDICTED: diacylglycerol kinase 5-like isoform X1 [Solanum tuberosum]
Solyc08g080370.3.1	1451	2549.27969956741	907.514976409806	-1.49009631363442	2.18761759802989e-06	Down	2.73656055575828e-07	GO:0043231//intracellular membrane-bounded organelle	GO:0008483//transaminase activity;GO:0048037//cofactor binding	GO:0006525//arginine metabolic process	K00818//acetylornithine aminotransferase [EC:2.6.1.11]	gi|460400249|ref|XP_004245648.1|//PREDICTED: acetylornithine aminotransferase, mitochondrial [Solanum lycopersicum];gi|763431233|gb|AJQ21447.1|//N2-acetylornithine aminotransferase [Solanum lycopersicum]
Solyc04g079760.3.1	1639	659.74201816466	3381.3154738224	2.35761072827524	0.000955678997956547	Up	0.000211775445163697	NA	NA	NA	NA	gi|460385033|ref|XP_004238210.1|//PREDICTED: uncharacterized protein LOC101245158 isoform X2 [Solanum lycopersicum];gi|460385031|ref|XP_004238209.1|//PREDICTED: uncharacterized protein LOC101245158 isoform X1 [Solanum lycopersicum]
Solyc05g009370.3.1	1227	9508.03340488361	2089.12628252925	-2.18624726956025	1.86138579185621e-09	Down	1.37515530023073e-10	GO:0030529//intracellular ribonucleoprotein complex	GO:0005198//structural molecule activity	GO:0010467//gene expression	K02876//large subunit ribosomal protein L15	gi|460386490|ref|XP_004238931.1|//PREDICTED: 50S ribosomal protein L15, chloroplastic [Solanum lycopersicum]
Solyc06g011374.1.1	1628	61.7622757204731	26.6731855570157	-1.21133577669058	0.0403985690662108	Down	0.0145409277427195	NA	NA	NA	NA	gi|460389916|ref|XP_004240591.1|//PREDICTED: coiled-coil domain-containing protein 93 isoform X1 [Solanum lycopersicum];gi|970031709|ref|XP_015077147.1|//PREDICTED: coiled-coil domain-containing protein 93 isoform X6 [Solanum pennellii];gi|723704633|ref|XP_010321895.1|//PREDICTED: coiled-coil domain-containing protein 93 isoform X2 [Solanum lycopersicum];gi|971565570|ref|XP_015168057.1|//PREDICTED: coiled-coil domain-containing protein 93 isoform X3 [Solanum tuberosum]
Solyc05g013670.3.1	1957	535.468894422496	124.654508923958	-2.10286770271968	0.00023599376843505	Down	4.50207285988739e-05	NA	NA	NA	K03517//quinolinate synthase [EC:2.5.1.72]	gi|460386909|ref|XP_004239136.1|//PREDICTED: uncharacterized protein LOC101244485 [Solanum lycopersicum]
Solyc06g076655.1.1	2081	197.2908921874	395.313214591638	1.0026718261277	0.00694375637900063	Up	0.00193756374881462	GO:0000015//phosphopyruvate hydratase complex	GO:0000287//magnesium ion binding;GO:0004634//phosphopyruvate hydratase activity	GO:0006096//glycolytic process	K01689//enolase [EC:4.2.1.11]	gi|225434716|ref|XP_002281136.1|//PREDICTED: cytosolic enolase 3 [Vitis vinifera];gi|747084039|ref|XP_011089410.1|//PREDICTED: cytosolic enolase 3 [Sesamum indicum];gi|970031838|ref|XP_015077216.1|//PREDICTED: cytosolic enolase 3 [Solanum pennellii]
Solyc11g008780.2.1	1947	646.819663800464	276.788943477478	-1.2245772237927	0.0223206470519076	Down	0.00731486241540076	GO:0005794//Golgi apparatus;GO:0032541//cortical endoplasmic reticulum;GO:0016021//integral component of membrane	GO:0031406//carboxylic acid binding;GO:0016744//transferase activity, transferring aldehyde or ketonic groups	GO:0008652//cellular amino acid biosynthetic process;GO:0006665//sphingolipid metabolic process;GO:0097036//regulation of plasma membrane sterol distribution;GO:0016125//sterol metabolic process;GO:0032366//intracellular sterol transport	K01653//acetolactate synthase I/III small subunit [EC:2.2.1.6]	gi|460409319|ref|XP_004250086.1|//PREDICTED: protein arv1 homolog [Solanum lycopersicum];gi|460409317|ref|XP_004250085.1|//PREDICTED: acetolactate synthase small subunit 1, chloroplastic [Solanum lycopersicum]
Solyc11g066400.1.1	885	61.9654739468764	17.6647453847456	-1.81059164077207	0.00733981173585702	Down	0.00206586098171524	NA	NA	NA	NA	gi|460411955|ref|XP_004251369.1|//PREDICTED: zinc finger protein ZAT5 [Solanum lycopersicum]
Solyc12g056550.1.1	1137	97.1683203085607	580.193789980779	2.57797691877933	0.0353112770839529	Up	0.012435240387326	NA	NA	NA	NA	gi|460414453|ref|XP_004252585.1|//PREDICTED: uncharacterized protein LOC101257050 [Solanum lycopersicum]
Solyc12g055720.2.1	2968	2036.91641932852	662.854264049057	-1.61962316588305	0.000115034427974281	Down	2.04187396009216e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13941//2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase / dihydropteroate synthase [EC:2.7.6.3 2.5.1.15];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460414535|ref|XP_004252624.1|//PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 6 [Solanum lycopersicum]
Solyc02g081590.3.1	2905	2147.23239867641	5206.91065980097	1.277949308145	0.00846208101921498	Up	0.00241895405309228	NA	NA	NA	NA	gi|460373695|ref|XP_004232650.1|//PREDICTED: uncharacterized protein LOC101260294 [Solanum lycopersicum]
Solyc01g110580.2.1	557	88.0601516564024	1.95904242692038	-5.49026878141568	1.38316803684925e-09	Down	1.00071908436126e-10	NA	NA	NA	K14488//SAUR family protein	gi|723666114|ref|XP_010315342.1|//PREDICTED: auxin-induced protein 15A-like [Solanum lycopersicum]
Solyc01g108130.3.1	1722	166.039978007	554.84733049079	1.74056021407279	7.98641603365492e-07	Up	9.14204698052566e-08	NA	NA	NA	NA	gi|460369875|ref|XP_004230782.1|//PREDICTED: B3 domain-containing protein At5g42700 [Solanum lycopersicum]
Solyc05g026490.3.1	2059	1175.01056082997	269.904891522265	-2.12215069528051	4.35420168592263e-06	Down	5.73080027400381e-07	NA	GO:0016868//intramolecular transferase activity, phosphotransferases	GO:0044238//primary metabolic process	NA	gi|460387328|ref|XP_004239330.1|//PREDICTED: uncharacterized protein LOC101267404 [Solanum lycopersicum]
Solyc03g120090.1.1	1116	516.710346951158	1255.9205255328	1.28131749493839	0.0051863710088115	Up	0.00139015930834812	NA	NA	GO:0009108//coenzyme biosynthetic process	K06215//pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]	gi|460379935|ref|XP_004235714.1|//PREDICTED: probable pyridoxal biosynthesis protein PDX1.2 [Solanum lycopersicum]
Solyc02g071240.3.1	3179	297.824118577035	714.638701042265	1.26275345287807	1.21536596234859e-06	Up	1.45283980962127e-07	NA	NA	NA	K13217//pre-mRNA-processing factor 39;K18577//mannosylglycoprotein endo-beta-mannosidase [EC:3.2.1.152];K13415//protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1]	gi|723675585|ref|XP_004233865.2|//PREDICTED: uncharacterized protein LOC101258918 isoform X2 [Solanum lycopersicum];gi|697140655|ref|XP_009624430.1|//PREDICTED: uncharacterized protein LOC104115485 [Nicotiana tomentosiformis];gi|970011989|ref|XP_015066926.1|//PREDICTED: uncharacterized protein LOC107011792 isoform X2 [Solanum pennellii]
Solyc08g005150.3.1	2948	399.979425327974	157.390421264534	-1.34557804913356	1.63843482426647e-06	Down	2.00743076910835e-07	NA	GO:0046914//transition metal ion binding	NA	K11971//E3 ubiquitin-protein ligase RNF14 [EC:2.3.2.27]	gi|970047553|ref|XP_015085305.1|//PREDICTED: E3 ubiquitin-protein ligase RNF14 [Solanum pennellii]
Solyc11g067270.1.1	1293	18.1350635754656	0.802357216901838	-4.49839331173426	0.000665060718771974	Down	0.000141297529863164	NA	NA	NA	K13065//shikimate O-hydroxycinnamoyltransferase [EC:2.3.1.133]	gi|723745432|ref|XP_004251378.2|//PREDICTED: deacetylvindoline O-acetyltransferase-like [Solanum lycopersicum]
Solyc03g019930.3.1	3789	426.009433866627	159.559798685925	-1.41678817059294	0.0281795218248451	Down	0.00958154160154455	NA	NA	NA	NA	gi|460377088|ref|XP_004234327.1|//PREDICTED: UPF0415 protein C7orf25 homolog [Solanum lycopersicum]
Solyc10g005440.2.1	2834	1.06672782950281	20.8093312304518	4.28596656904091	0.000115721771714191	Up	2.05623112330978e-05	NA	GO:0004672//protein kinase activity;GO:0005488//binding	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723735255|ref|XP_010327269.1|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase B120 [Solanum lycopersicum]
Solyc04g081730.3.1	3838	7953.31946805521	21435.2984267248	1.43035947558052	0.0228666103968418	Up	0.00752276365597606	NA	NA	NA	NA	gi|460385363|ref|XP_004238373.1|//PREDICTED: exocyst complex component 6 [Solanum lycopersicum]
Solyc03g025370.3.1	1481	92.1760912119006	28.945097847437	-1.67107355700195	0.000619543495300668	Down	0.000130868979717791	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K19329//WW domain-containing oxidoreductase	gi|460377358|ref|XP_004234460.1|//PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like isoform X1 [Solanum lycopersicum]
Solyc01g094700.3.1	1718	2844.33551479473	1041.71609538587	-1.44912950819434	0.000450280245507746	Down	9.1724375342919e-05	NA	GO:0008374//O-acyltransferase activity	NA	K13508//glycerol-3-phosphate acyltransferase [EC:2.3.1.15]	gi|723661171|ref|XP_010326475.1|//PREDICTED: glycerol-3-phosphate 2-O-acyltransferase 4 [Solanum lycopersicum]
Solyc08g080630.3.1	715	2.08966312312245	148.419439299938	6.15026586910696	6.29433031930179e-12	Up	3.14857286734121e-13	GO:0005576//extracellular region	GO:0004867//serine-type endopeptidase inhibitor activity;GO:0004866//endopeptidase inhibitor activity	GO:0009611//response to wounding;GO:0010951//negative regulation of endopeptidase activity;GO:0006950//response to stress;GO:0051346//negative regulation of hydrolase activity	NA	gi|350538787|ref|NP_001234615.1|//ethylene-responsive proteinase inhibitor 1 precursor [Solanum lycopersicum]
Solyc01g100860.3.1	1074	3817.88820916993	10007.0904900751	1.39017581379582	2.06106383729373e-08	Up	1.77773286100257e-09	GO:0044464//cell part;GO:0005622//intracellular	GO:0060229//lipase activator activity;GO:0032561//guanyl ribonucleotide binding;GO:0005525//GTP binding	GO:0007264//small GTPase mediated signal transduction;GO:0035556//intracellular signal transduction	K07937//ADP-ribosylation factor 1	gi|747080533|ref|XP_011087519.1|//PREDICTED: ADP-ribosylation factor 1 isoform X1 [Sesamum indicum];gi|568214929|ref|NP_001274834.1|//ARF-like small GTPase-like protein [Solanum tuberosum]
Solyc07g066610.3.1	2352	86613.2783464848	7535.90401551857	-3.52273572126405	1.41594576075824e-32	Down	8.18069155052656e-35	GO:0009536//plastid	GO:0032559//adenyl ribonucleotide binding;GO:0016301//kinase activity	GO:0006007//glucose catabolic process;GO:0015977//carbon fixation;GO:0006796//phosphate-containing compound metabolic process	K00927//phosphoglycerate kinase [EC:2.7.2.3]	gi|460396820|ref|XP_004243968.1|//PREDICTED: phosphoglycerate kinase, chloroplastic [Solanum lycopersicum]
Solyc07g005685.1.1	804	141.77780963702	40.2207117061343	-1.81762123124594	0.0158133521132434	Down	0.00491208695389427	NA	NA	NA	K16297//serine carboxypeptidase-like clade II [EC:3.4.16.-]	gi|970038201|ref|XP_015080439.1|//PREDICTED: serine carboxypeptidase 24 [Solanum pennellii];gi|723712145|ref|XP_004242603.2|//PREDICTED: serine carboxypeptidase 24 isoform X1 [Solanum lycopersicum];gi|723712148|ref|XP_010323186.1|//PREDICTED: serine carboxypeptidase 24 isoform X2 [Solanum lycopersicum];gi|723712151|ref|XP_010323187.1|//PREDICTED: serine carboxypeptidase 24 isoform X3 [Solanum lycopersicum]
Solyc05g010320.3.1	1077	2247.80286170923	192.259675578589	-3.54738740333067	5.82835380268382e-13	Down	2.50922492996116e-14	NA	GO:0016872//intramolecular lyase activity	GO:0009699//phenylpropanoid biosynthetic process;GO:0006575//cellular modified amino acid metabolic process	K01859//chalcone isomerase [EC:5.5.1.6]	gi|565363784|ref|XP_006348611.1|//PREDICTED: chalcone--flavonone isomerase B-like [Solanum tuberosum];gi|460386617|ref|XP_004238994.1|//PREDICTED: chalcone--flavonone isomerase [Solanum lycopersicum]
Solyc06g034160.3.1	1510	848.815388851387	2043.11736643337	1.26724936438307	0.00716765366967173	Up	0.00201206201678462	GO:0044424//intracellular part	NA	GO:0006810//transport;GO:0044248//cellular catabolic process	K08343//ubiquitin-like-conjugating enzyme ATG3	gi|460390271|ref|XP_004240761.1|//PREDICTED: autophagy-related protein 3 [Solanum lycopersicum]
Solyc09g092460.3.1	2991	316.540425052909	142.700554487035	-1.14939881586385	0.0183835286806503	Down	0.00583410478556197	NA	NA	NA	K00924	gi|723733079|ref|XP_004247890.2|//PREDICTED: probable receptor protein kinase TMK1 [Solanum lycopersicum]
Solyc08g007360.3.1	4540	1708.54184496436	4327.27812739774	1.34069426801748	0.00265148813884862	Up	0.000655657235467488	NA	NA	NA	K20353//COPII coat assembly protein SEC16	gi|460398323|ref|XP_004244711.1|//PREDICTED: protein transport protein SEC16A homolog [Solanum lycopersicum]
Solyc12g044940.2.1	1203	672.659548977499	10402.1309481894	3.95085879149827	1.7259766617139e-11	Up	9.19989051085013e-13	NA	NA	NA	K00059//3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100];K10256//omega-6 fatty acid desaturase / acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.6 1.14.19.22]	gi|971584342|ref|XP_006366156.2|//PREDICTED: 3-oxoacyl-[acyl-carrier-protein] reductase FabG-like, partial [Solanum tuberosum]
Solyc12g087840.1.1	948	225.44974650634	40.5411070416045	-2.47534849820688	0.000445164043403699	Down	9.05992126503726e-05	NA	NA	NA	K19041//E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27]	gi|460414723|ref|XP_004252713.1|//PREDICTED: RING-H2 finger protein ATL54-like [Solanum lycopersicum]
Solyc04g055200.3.1	1963	1237.11723292051	517.675565957411	-1.25686209048658	0.0044676344156318	Down	0.00117902384309949	NA	GO:0016884//carbon-nitrogen ligase activity, with glutamine as amido-N-donor	GO:0006528//asparagine metabolic process	K01953//asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]	gi|460383355|ref|XP_004237391.1|//PREDICTED: asparagine synthetase [glutamine-hydrolyzing] 2 [Solanum lycopersicum]
Solyc05g047560.1.1	1515	177.141604750449	24.921381873253	-2.82944712148687	5.28929423417897e-07	Down	5.85738709971529e-08	NA	NA	NA	NA	gi|460388937|ref|XP_004240120.1|//PREDICTED: uncharacterized protein LOC101262314 [Solanum lycopersicum]
Solyc03g119650.3.1	4165	906.452254207561	1827.78301691796	1.01179187710223	0.00330575409125062	Up	0.000838514111784721	NA	NA	NA	K10260//F-box and WD-40 domain protein 7;K16482//centriolar protein POC1;K20164//DENN domain-containing protein 5	gi|723685587|ref|XP_010318603.1|//PREDICTED: uncharacterized protein LOC101262196 isoform X1 [Solanum lycopersicum];gi|565349282|ref|XP_006341624.1|//PREDICTED: DENN domain and WD repeat-containing protein SCD1 [Solanum tuberosum];gi|723685590|ref|XP_010318604.1|//PREDICTED: uncharacterized protein LOC101262196 isoform X2 [Solanum lycopersicum];gi|747098051|ref|XP_011097014.1|//PREDICTED: uncharacterized protein LOC105176035 [Sesamum indicum]
Solyc01g058720.3.1	1156	1250.32604354023	7330.66877258593	2.55164046964223	1.12744591743854e-07	Up	1.10987947963142e-08	NA	NA	NA	K02183//calmodulin	gi|460366278|ref|XP_004229015.1|//PREDICTED: calmodulin [Solanum lycopersicum]
Solyc07g064810.3.1	2186	664.067573111991	266.383603855703	-1.31782476646826	1.39486191287569e-05	Down	2.03863633531593e-06	GO:0005737//cytoplasm	GO:0016833//oxo-acid-lyase activity;GO:0000107//imidazoleglycerol-phosphate synthase activity	GO:0000105//histidine biosynthetic process	K01663//glutamine amidotransferase / cyclase [EC:2.4.2.- 4.1.3.-]	gi|460397088|ref|XP_004244100.1|//PREDICTED: imidazole glycerol phosphate synthase hisHF, chloroplastic [Solanum lycopersicum];gi|698568254|ref|XP_009774003.1|//PREDICTED: imidazole glycerol phosphate synthase hisHF, chloroplastic [Nicotiana sylvestris]
Solyc07g062050.3.1	2214	242.795219869241	85.7278612889769	-1.50190396115055	1.34896488131614e-05	Down	1.96552248436886e-06	NA	NA	NA	K05356//all-trans-nonaprenyl-diphosphate synthase [EC:2.5.1.84 2.5.1.85]	gi|460397500|ref|XP_004244305.1|//PREDICTED: uncharacterized protein LOC101252101 [Solanum lycopersicum]
Solyc01g105370.3.1	1639	648.620422880417	3274.2485766161	2.33571749822009	6.1634000491067e-05	Up	1.03150072412788e-05	GO:0005829//cytosol	GO:0016703//oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases);GO:0018580//nitronate monooxygenase activity	GO:0008152//metabolic process;GO:0009608//response to symbiont;GO:0010038//response to metal ion;GO:0055114//oxidation-reduction process	K05681//ATP-binding cassette, subfamily G (WHITE), member 2;K01626//3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]	gi|723664505|ref|XP_004230644.2|//PREDICTED: phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic-like [Solanum lycopersicum];gi|460369438|ref|XP_004230569.1|//PREDICTED: nitronate monooxygenase [Solanum lycopersicum];gi|970004201|ref|XP_015062891.1|//PREDICTED: ABC transporter G family member 11-like [Solanum pennellii];gi|661899431|emb|CDO97425.1|//unnamed protein product [Coffea canephora]
Solyc07g055410.2.1	240	1.83235900219343	20.127209079627	3.45737304208107	0.00161017985527486	Up	0.000375716635381713	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723714815|ref|XP_010323667.1|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 isoform X2 [Solanum lycopersicum]
Solyc10g038080.2.1	2133	243.632780669092	1177.75766428762	2.27326255509563	4.23912512563073e-08	Up	3.86811477096467e-09	GO:0044424//intracellular part	GO:0016616//oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;GO:0016836//hydro-lyase activity;GO:0005488//binding	GO:0008652//cellular amino acid biosynthetic process	K13832//3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25]	gi|723735375|ref|XP_010327280.1|//PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic-like [Solanum lycopersicum]
Solyc07g052070.2.1	2420	1142.02822288898	8.42421886575104	-7.08283967021107	5.75059859240766e-39	Down	1.92915563335578e-41	NA	GO:0005506//iron ion binding;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K07428//cytochrome P450, family 4, subfamily X [EC:1.14.14.1]	gi|460396572|ref|XP_004243845.1|//PREDICTED: cytochrome P450 CYP72A219-like [Solanum lycopersicum]
Solyc07g005960.3.1	1872	304.000199412804	139.069025584472	-1.12827114138523	0.0353112770839529	Down	0.0124355503909791	NA	GO:0004180//carboxypeptidase activity	GO:0019538//protein metabolic process	K16297//serine carboxypeptidase-like clade II [EC:3.4.16.-]	gi|460394053|ref|XP_004242620.1|//PREDICTED: serine carboxypeptidase II-2 [Solanum lycopersicum]
Solyc03g080030.3.1	570	25.9549815063294	2.69896347233335	-3.26553410309745	0.00333561452851459	Down	0.000847207298244311	NA	NA	NA	NA	gi|460378563|ref|XP_004235040.1|//PREDICTED: major latex allergen Hev b 5-like [Solanum lycopersicum]
Solyc07g051930.2.1	1302	15.8148747263095	72.0702766004229	2.188122254372	0.0104757054385384	Up	0.00307792406402902	NA	NA	NA	K20716	gi|723715821|ref|XP_010323839.1|//PREDICTED: mitogen-activated protein kinase kinase kinase A-like [Solanum lycopersicum]
Solyc07g063550.3.1	1877	1605.95611174232	3438.29668530126	1.0982615713053	0.00210671949573338	Up	0.000505870247186314	NA	NA	NA	K12486//stromal membrane-associated protein	gi|460397269|ref|XP_004244190.1|//PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD5 [Solanum lycopersicum]
Solyc11g011190.1.1	1047	321.704401553806	1692.24099184247	2.39512745695548	2.15156516877966e-08	Up	1.85980305143881e-09	NA	NA	NA	K18789//xylogalacturonan beta-1,3-xylosyltransferase [EC:2.4.2.41];K01930//folylpolyglutamate synthase [EC:6.3.2.17]	gi|460409516|ref|XP_004250184.1|//PREDICTED: probable glycosyltransferase At5g11130 [Solanum lycopersicum]
Solyc04g015850.2.1	1128	1040.97249923037	165.469198534985	-2.65329736061114	7.85936283678682e-08	Down	7.54062917171957e-09	NA	NA	NA	NA	gi|460381754|ref|XP_004236607.1|//PREDICTED: uncharacterized protein LOC101267797 [Solanum lycopersicum]
Solyc10g083940.1.1	1746	28.3350828403193	0.994573009864088	-4.83236832942046	0.000310735736448615	Down	6.09587811588288e-05	NA	NA	NA	K14794//ribosomal RNA-processing protein 12	gi|460408084|ref|XP_004249478.1|//PREDICTED: uncharacterized protein LOC101244136 [Solanum lycopersicum]
Solyc06g063200.2.1	3316	31.6037572834694	323.310422726595	3.35475202538289	1.66367423015275e-06	Up	2.03959465594617e-07	NA	NA	NA	K05387//glutamate receptor, ionotropic, plant	gi|460393330|ref|XP_004242263.1|//PREDICTED: glutamate receptor 2.9-like isoform X1 [Solanum lycopersicum];gi|723709995|ref|XP_010322806.1|//PREDICTED: glutamate receptor 2.8-like isoform X2 [Solanum lycopersicum]
Solyc10g085120.2.1	3162	102.622895152026	9.26670301061357	-3.46915268630306	2.87152235479119e-10	Down	1.86454150217916e-11	NA	NA	NA	K13428//LRR receptor-like serine/threonine-protein kinase EFR [EC:2.7.11.1];K20181//vacuolar protein sorting-associated protein 18	gi|460408779|ref|XP_004249819.1|//PREDICTED: putative receptor-like protein kinase At3g47110 [Solanum lycopersicum]
Solyc08g081040.3.1	1337	89.4566763756134	203.282760947999	1.18422681169904	0.0141398472504679	Up	0.00432158173708401	NA	NA	NA	NA	gi|460400169|ref|XP_004245608.1|//PREDICTED: uncharacterized protein LOC101259063 [Solanum lycopersicum]
Solyc01g007770.2.1	727	230.9741670638	1612.52975387221	2.80352237106127	0.000148657519527487	Up	2.71183055228687e-05	NA	NA	NA	NA	gi|969997045|ref|XP_015065815.1|//PREDICTED: uncharacterized protein LOC107011016 [Solanum pennellii]
Solyc01g016455.1.1	2619	349.11309747729	84.3510735688616	-2.04921614719212	8.19352837121178e-06	Down	1.15051027771944e-06	NA	NA	NA	NA	gi|971587422|ref|XP_015161091.1|//PREDICTED: uncharacterized protein LOC102592123 isoform X2 [Solanum tuberosum];gi|565404570|ref|XP_006367707.1|//PREDICTED: uncharacterized protein LOC102592123 isoform X1 [Solanum tuberosum]
Solyc10g052470.1.1	708	510.977230235461	181.915289036647	-1.48999220523463	0.00711049799180914	Down	0.00199310216558837	GO:0043231//intracellular membrane-bounded organelle;GO:0005634//nucleus	GO:0003677//DNA binding;GO:0003676//nucleic acid binding	NA	NA	gi|350540018|ref|NP_001233849.1|//SANT/MYB domain protein [Solanum lycopersicum]
Solyc03g118660.3.1	1773	217.897452986585	645.818692606279	1.56747986616533	7.30433705668666e-07	Up	8.28503714905976e-08	GO:0012505//endomembrane system;GO:0005768//endosome	GO:0008565//protein transporter activity	GO:0006886//intracellular protein transport;GO:0046907//intracellular transport	K18466//vacuolar protein sorting-associated protein 26	gi|460380072|ref|XP_004235782.1|//PREDICTED: Down syndrome critical region protein 3 isoform X1 [Solanum lycopersicum];gi|971540362|ref|XP_015161697.1|//PREDICTED: Down syndrome critical region protein 3 isoform X2 [Solanum tuberosum];gi|723685894|ref|XP_010318649.1|//PREDICTED: Down syndrome critical region protein 3 isoform X2 [Solanum lycopersicum]
Solyc04g007400.3.1	2137	434.223758638963	913.759611217326	1.07337601041749	0.0105262334136986	Up	0.00309493548409329	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|723690384|ref|XP_010319415.1|//PREDICTED: probable serine/threonine-protein kinase At1g18390 [Solanum lycopersicum]
Solyc12g040460.2.1	856	146.804596520119	56.7007735561728	-1.372456817555	0.00320390354021163	Down	0.000810171522916196	NA	NA	NA	K17553//protein phosphatase 1 regulatory subunit 11	gi|460413803|ref|XP_004252268.1|//PREDICTED: uncharacterized protein LOC101245139 [Solanum lycopersicum]
Solyc03g095700.1.1	426	4.89888484623371	44.5050148695705	3.18344262458646	6.0288970422654e-05	Up	1.00676378221817e-05	NA	NA	NA	NA	gi|723683358|ref|XP_010318229.1|//PREDICTED: uncharacterized protein LOC104646455 [Solanum lycopersicum]
Solyc06g082780.3.1	1472	319.626631711494	1440.46480216189	2.17207488295865	3.92727401145896e-07	Up	4.25986557825614e-08	NA	NA	NA	K20858	gi|460393742|ref|XP_004242468.1|//PREDICTED: mitochondrial calcium uniporter regulatory subunit MCUb-like [Solanum lycopersicum]
Solyc07g047740.3.1	3904	4.24322138963738	27.1559398375196	2.67803593606155	0.0190564627446861	Up	0.00608531073258261	NA	NA	NA	K00430//peroxidase [EC:1.11.1.7]	gi|806638513|ref|NP_001234644.2|//peroxidase precursor [Solanum lycopersicum]
Solyc03g123370.3.1	3035	7509.69960404462	47982.48352717	2.67568072739742	4.52382744172775e-10	Up	3.03690667308472e-11	NA	NA	NA	NA	gi|460379592|ref|XP_004235545.1|//PREDICTED: probable GTP diphosphokinase RSH2, chloroplastic [Solanum lycopersicum]
Solyc10g050970.1.1	672	182.027466302572	3350.68599917183	4.20222843283256	1.14339846976401e-05	Up	1.64000197989112e-06	NA	NA	NA	K09286//EREBP-like factor	gi|460406569|ref|XP_004248735.1|//PREDICTED: ethylene-responsive transcription factor ERF109-like [Solanum lycopersicum]
Solyc01g020190.2.1	542	18.0808138478549	95.5844863373698	2.40231686591929	7.4729095292297e-05	Up	1.26711888506284e-05	NA	NA	NA	K10661//E3 ubiquitin-protein ligase MARCH6 [EC:2.3.2.27]	gi|970001073|ref|XP_015056489.1|//PREDICTED: probable E3 ubiquitin ligase SUD1 isoform X2 [Solanum pennellii]
Solyc07g061740.3.1	2076	433.360463083825	83.1743790435914	-2.38135644206163	1.08945826137852e-09	Down	7.75631906676967e-11	NA	NA	NA	K15502//serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A	gi|460397532|ref|XP_004244321.1|//PREDICTED: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B [Solanum lycopersicum]
Solyc11g071530.1.1	618	0.515319771458373	45.7732780531046	6.47289385806145	1.076892181763e-06	Up	1.27326002704347e-07	NA	NA	NA	K02935//large subunit ribosomal protein L7/L12	gi|460411617|ref|XP_004251203.1|//PREDICTED: 54S ribosomal protein L12, mitochondrial-like [Solanum lycopersicum]
Solyc00g044350.3.1	572	453.73291405787	36.8407830391397	-3.62246768655616	4.37861564622422e-06	Down	5.7678648030999e-07	NA	NA	NA	NA	gi|723754368|ref|XP_004253369.2|//PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 1 [Solanum lycopersicum]
Solyc04g009730.3.1	2956	380.874697119058	109.37150051817	-1.80007959084553	4.73744527128733e-11	Down	2.71412456462227e-12	GO:0009507//chloroplast	GO:0000166//nucleotide binding;GO:0003676//nucleic acid binding	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial;K02184//formin 2	gi|460382161|ref|XP_004236808.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g04810, chloroplastic-like isoform X1 [Solanum lycopersicum];gi|971586309|ref|XP_015160755.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g04810, chloroplastic-like [Solanum tuberosum];gi|723689611|ref|XP_010319289.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g04810, chloroplastic-like isoform X2 [Solanum lycopersicum]
Solyc04g011900.3.1	3434	3311.83995834088	536.365711733659	-2.62634403949841	1.50620562238728e-18	Down	3.22822511134892e-20	NA	NA	NA	K13457//disease resistance protein RPM1	gi|970022231|ref|XP_015072398.1|//PREDICTED: putative late blight resistance protein homolog R1B-14 [Solanum pennellii];gi|460381968|ref|XP_004236712.1|//PREDICTED: uncharacterized protein LOC101250205 [Solanum lycopersicum]
Solyc07g044910.1.1	156	30.9384955465923	0.956121662964904	-5.01606502647615	0.0013440660314688	Down	0.000307560062889032	NA	NA	NA	NA	NA
Solyc06g075280.3.1	2456	20.3136052900789	0.758783832963096	-4.74261356360295	0.000153467768661277	Down	2.81616902161722e-05	NA	NA	NA	NA	gi|460392983|ref|XP_004242091.1|//PREDICTED: vicilin-like antimicrobial peptides 2-2 [Solanum lycopersicum]
Solyc11g017270.2.1	3291	1521.10241224238	5593.1548311521	1.87854497834066	0.00366967835531149	Up	0.000946554876202308	NA	NA	NA	K00924;K20718//null	gi|970059602|ref|XP_015056547.1|//PREDICTED: leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 [Solanum pennellii]
Solyc01g057685.1.1	2527	0.756503347930537	22.1573526635877	4.87229524267238	5.29441747383544e-05	Up	8.71285714439521e-06	NA	NA	NA	K07466//replication factor A1	gi|970066756|ref|XP_015060416.1|//PREDICTED: uncharacterized protein LOC107006356 [Solanum pennellii]
Solyc01g109680.3.1	1086	257.316948701455	89.2749640354774	-1.52721893349653	0.00108350635601638	Down	0.000242686361014703	NA	NA	NA	NA	gi|460370271|ref|XP_004230977.1|//PREDICTED: uncharacterized protein LOC101246482 [Solanum lycopersicum]
Solyc10g085160.2.1	1135	574.0544639008	285.907200191774	-1.00564066752348	0.0164345612526032	Down	0.00512676469073492	NA	NA	NA	K18826//calmodulin-lysine N-methyltransferase [EC:2.1.1.60];K17878//nicotinamide N-methyltransferase [EC:2.1.1.1]	gi|460408390|ref|XP_004249628.1|//PREDICTED: protein-lysine methyltransferase METTL21C [Solanum lycopersicum]
Solyc10g078560.3.1	1330	535.151294594988	179.086774491774	-1.57928802018006	8.96521614959329e-08	Down	8.67849498303779e-09	GO:0016021//integral component of membrane	NA	NA	K03686//molecular chaperone DnaJ	gi|460407415|ref|XP_004249148.1|//PREDICTED: uncharacterized protein LOC101246294 [Solanum lycopersicum]
Solyc01g057210.3.1	1986	2058.78293366269	887.121170641953	-1.21458864964765	5.33112837754361e-08	Down	4.94578362786392e-09	NA	NA	NA	K00898//pyruvate dehydrogenase kinase 2/3/4 [EC:2.7.11.2]	gi|815890975|ref|NP_001295113.1|//uncharacterized LOC101253414 [Solanum lycopersicum]
Solyc04g008170.1.1	1455	4.28420500735629	15.8137510043675	1.88408019141338	0.0495137738981394	Up	0.0185039919898146	NA	GO:0032559//adenyl ribonucleotide binding	GO:0012501//programmed cell death;GO:0006950//response to stress	K13453;K13457//disease resistance protein RPM1	gi|26190256|emb|CAD29727.1|//hero resistance protein 3 homologue [Solanum lycopersicum]
Solyc04g078900.3.1	1750	241.738156059266	18.1313499881001	-3.73688695519071	7.31952198075896e-09	Down	5.92317065015197e-10	NA	GO:0005506//iron ion binding;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K09843//(+)-abscisic acid 8'-hydroxylase [EC:1.14.13.93]	gi|350536713|ref|NP_001234517.1|//ABA 8'-hydroxylase [Solanum lycopersicum]
Solyc12g056660.2.1	1276	219.745432171174	100.376490452324	-1.1304117665749	0.041057579383837	Down	0.014809553176085	GO:0016021//integral component of membrane	NA	GO:0055085//transmembrane transport	K15111//solute carrier family 25 (mitochondrial S-adenosylmethionine transporter), member 26	gi|460414412|ref|XP_004252565.1|//PREDICTED: S-adenosylmethionine carrier 1, chloroplastic/mitochondrial-like isoform X1 [Solanum lycopersicum];gi|723751838|ref|XP_010314471.1|//PREDICTED: S-adenosylmethionine carrier 1, chloroplastic/mitochondrial-like isoform X2 [Solanum lycopersicum]
Solyc10g079710.2.1	1585	77.8610482594955	238.094281177892	1.61255929548455	0.000202547123048613	Up	3.81795438070983e-05	NA	NA	NA	K14492//two-component response regulator ARR-A family	gi|460407570|ref|XP_004249225.1|//PREDICTED: uncharacterized protein LOC101268817 isoform X3 [Solanum lycopersicum];gi|723738329|ref|XP_010312107.1|//PREDICTED: uncharacterized protein LOC101268817 isoform X2 [Solanum lycopersicum];gi|723738334|ref|XP_010312108.1|//PREDICTED: uncharacterized protein LOC101268817 isoform X4 [Solanum lycopersicum]
Solyc01g090300.2.1	717	1.62298346613875	19.9209277040365	3.61756462642692	0.00337532830658624	Up	0.000858803899685316	NA	NA	NA	K09286//EREBP-like factor	gi|460370616|ref|XP_004231147.1|//PREDICTED: ethylene-responsive transcription factor 13-like [Solanum lycopersicum]
Solyc01g007960.3.1	2394	29.7451988646235	178.791009882271	2.58754546683666	0.00452674509581984	Up	0.00119631067278078	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460366034|ref|XP_004228898.1|//PREDICTED: cysteine-rich receptor-like protein kinase 2 isoform X1 [Solanum lycopersicum]
Solyc07g041940.3.1	1534	15.2446792123795	562.808556097893	5.20626656358331	5.58984650350844e-16	Up	1.61686330949849e-17	NA	GO:0004672//protein kinase activity	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460396282|ref|XP_004243705.1|//PREDICTED: serine/threonine-protein kinase At5g01020 [Solanum lycopersicum]
Solyc10g007280.3.1	1638	1060.72540017863	7346.30908521959	2.7919683758888	0.000508295146423367	Up	0.000104830663678265	NA	NA	NA	K08900//mitochondrial chaperone BCS1	gi|460405559|ref|XP_004248243.1|//PREDICTED: probable mitochondrial chaperone BCS1-A [Solanum lycopersicum]
Solyc09g008780.3.1	2685	9261.34852250789	4177.63224930253	-1.1485367763933	0.0226818170671791	Down	0.007455205863217	NA	NA	NA	NA	gi|460402164|ref|XP_004246584.1|//PREDICTED: uncharacterized protein LOC101249675 [Solanum lycopersicum]
Solyc06g051130.1.1	1305	131.055494181596	41.6474494192764	-1.65387778678614	9.92225432245512e-05	Down	1.72866470490365e-05	NA	NA	NA	K15400//omega-hydroxypalmitate O-feruloyl transferase [EC:2.3.1.188];K19861//benzyl alcohol O-benzoyltransferase [EC:2.3.1.196 2.3.1.232]	gi|723706091|ref|XP_004240917.2|//PREDICTED: omega-hydroxypalmitate O-feruloyl transferase [Solanum lycopersicum]
Solyc01g105540.3.1	1233	3781.77713071155	592.30394479395	-2.67465474453133	2.20781331404463e-16	Down	6.07337940124099e-18	GO:0044464//cell part	NA	GO:0030001//metal ion transport	K03319//divalent anion:Na+ symporter, DASS family	gi|970001775|ref|XP_015059401.1|//PREDICTED: dicarboxylate transporter 2.1, chloroplastic-like [Solanum pennellii]
Solyc01g100770.2.1	768	1863.4824857692	258.103325017484	-2.85198062754519	6.70232743735641e-11	Down	3.94724815529415e-12	NA	NA	NA	K07019//uncharacterized protein	gi|460368949|ref|XP_004230327.1|//PREDICTED: uncharacterized protein LOC101255245 [Solanum lycopersicum]
Solyc06g008500.3.1	2131	913.837971801322	96.78280961567	-3.23911566413362	5.23948121789641e-10	Down	3.55834753951366e-11	NA	NA	NA	K01931//protein neuralized [EC:2.3.2.27];K06867//uncharacterized protein;K15502//serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A;K15688//E3 ubiquitin-protein ligase MUL1 [EC:2.3.2.27]	gi|460389727|ref|XP_004240501.1|//PREDICTED: putative E3 ubiquitin-protein ligase XBAT35 [Solanum lycopersicum]
Solyc01g097390.3.1	1970	87.4348034435331	228.430342914133	1.38547473559012	0.0313635795211181	Up	0.0108617495650331	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K17744//L-galactose dehydrogenase [EC:1.1.1.316];K05275//pyridoxine 4-dehydrogenase [EC:1.1.1.65]	gi|460368493|ref|XP_004230100.1|//PREDICTED: perakine reductase-like [Solanum lycopersicum]
Solyc10g006660.3.1	1093	1058.35142301807	3454.06700970227	1.7064773213727	0.015597979546703	Up	0.00483777154500815	NA	GO:0046872//metal ion binding	NA	K16465//centrin-1;K10840//centrin-2	gi|460405842|ref|XP_004248383.1|//PREDICTED: calcium-binding protein PBP1-like [Solanum lycopersicum]
Solyc08g075160.3.1	2256	1740.29681561708	711.656579790036	-1.29008026452536	1.54579289136911e-06	Down	1.88412954926829e-07	NA	GO:0019238//cyclohydrolase activity;GO:0016742//hydroxymethyl-, formyl- and related transferase activity	GO:0009168//purine ribonucleoside monophosphate biosynthetic process	K00602//phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]	gi|350535392|ref|NP_001234704.1|//putative inosine monophosphate cyclohydrolase [Solanum lycopersicum]
Solyc01g108100.3.1	1799	0.546733717564703	266.207778024305	8.92749865841015	1.51126172081204e-15	Up	4.55721907013919e-17	NA	NA	NA	NA	gi|460369869|ref|XP_004230779.1|//PREDICTED: uncharacterized protein LOC101264074 [Solanum lycopersicum]
Solyc02g087790.2.1	1272	1.81574080614985	14.8569219655776	3.03250507125274	0.0124991725340329	Up	0.00375701980447447	NA	NA	NA	K01785//aldose 1-epimerase [EC:5.1.3.3]	gi|723678070|ref|XP_010317286.1|//PREDICTED: aldose 1-epimerase-like [Solanum lycopersicum]
Solyc03g026110.3.1	2138	1311.70756549563	441.087771201179	-1.5723084501566	6.48999825694535e-07	Down	7.30088517200725e-08	NA	NA	NA	NA	gi|460377169|ref|XP_004234367.1|//PREDICTED: uncharacterized protein LOC101268068 [Solanum lycopersicum]
Solyc07g052720.3.1	1349	6.21083293785231	148.293602238421	4.57752578543141	5.72182492192779e-05	Up	9.48447719837964e-06	NA	NA	NA	K09260//MADS-box transcription enhancer factor 2A;K04454//MADS-box transcription enhancer factor 2C	gi|723715621|ref|XP_010323800.1|//PREDICTED: MADS-box transcription factor 50-like isoform X1 [Solanum lycopersicum]
Solyc03g044300.3.1	1740	38.4330700565726	187.255045521999	2.28458446266597	1.85995266088959e-07	Up	1.89960872627012e-08	GO:0043231//intracellular membrane-bounded organelle;GO:0005634//nucleus	GO:0003677//DNA binding;GO:0003700//transcription factor activity, sequence-specific DNA binding;GO:0001071//nucleic acid binding transcription factor activity;GO:0003676//nucleic acid binding	GO:0048316//seed development;GO:0048481//plant ovule development;GO:0006355//regulation of transcription, DNA-templated;GO:0006351//transcription, DNA-templated;GO:0010093//specification of floral organ identity;GO:0010073//meristem maintenance	K09284//AP2-like factor, euAP2 lineage	gi|350535469|ref|NP_001234452.1|//APETALA2-like protein [Solanum lycopersicum]
Solyc11g006540.2.1	1835	226.631424362242	3506.15919540194	3.95147168042957	1.87198203419083e-37	Up	7.11727178647176e-40	NA	GO:0003824//catalytic activity;GO:0050662//coenzyme binding	GO:0008152//metabolic process	K01008//selenide, water dikinase [EC:2.7.9.3];K17871//NADH:ubiquinone reductase (non-electrogenic) [EC:1.6.5.9]	gi|460409029|ref|XP_004249943.1|//PREDICTED: apoptosis-inducing factor homolog A-like [Solanum lycopersicum]
Solyc09g075640.3.1	4267	513.068139707485	159.903858635607	-1.68194568756002	3.42603203266823e-08	Down	3.05977812370399e-09	NA	NA	NA	K17604//zinc finger SWIM domain-containing protein 3	gi|460403816|ref|XP_004247382.1|//PREDICTED: protein FAR1-RELATED SEQUENCE 11-like [Solanum lycopersicum]
Solyc08g008000.2.1	3062	248.805011378383	80.6636109726028	-1.62502564849525	0.000171535684697266	Down	3.1828859341844e-05	GO:0005737//cytoplasm	GO:0003941//L-serine ammonia-lyase activity;GO:0008721//D-serine ammonia-lyase activity;GO:0048037//cofactor binding;GO:0016841//ammonia-lyase activity;GO:0030378//serine racemase activity;GO:0030170//pyridoxal phosphate binding	GO:0019752//carboxylic acid metabolic process;GO:0070179//D-serine biosynthetic process;GO:0006563//L-serine metabolic process	K12235//serine racemase [EC:5.1.1.18]	gi|460398118|ref|XP_004244610.1|//PREDICTED: serine racemase-like [Solanum lycopersicum];gi|460398345|ref|XP_004244722.1|//PREDICTED: serine racemase-like [Solanum lycopersicum];gi|460398120|ref|XP_004244611.1|//PREDICTED: serine racemase [Solanum lycopersicum]
Solyc01g094290.3.1	3695	4163.36252351553	1164.78027785485	-1.83769135313842	7.3202964228852e-06	Down	1.01531321714462e-06	NA	NA	NA	K20286//TATA element modulatory factor;K20478//golgin subfamily B member 1	gi|970000993|ref|XP_015056111.1|//PREDICTED: K(+) efflux antiporter 2, chloroplastic [Solanum pennellii];gi|460368045|ref|XP_004229880.1|//PREDICTED: K(+) efflux antiporter 2, chloroplastic-like [Solanum lycopersicum]
Solyc03g117690.3.1	1772	953.185347094574	161.396967138036	-2.56214330504569	5.29487799785192e-08	Down	4.90843953356855e-09	NA	NA	NA	K00924;K02882//large subunit ribosomal protein L18Ae;K01381//saccharopepsin [EC:3.4.23.25]	gi|460380278|ref|XP_004235884.1|//PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2-like [Solanum lycopersicum]
Solyc08g078760.1.1	2886	174.557136595235	43.0693485451006	-2.01896593419447	0.0275901081465321	Down	0.0093533634110895	NA	NA	NA	NA	gi|460400473|ref|XP_004245759.1|//PREDICTED: uncharacterized protein LOC101253408 [Solanum lycopersicum]
Solyc10g005050.3.1	997	13996.6453461877	3961.36783643354	-1.82101051451637	1.2086158120358e-10	Down	7.36576283240845e-12	NA	NA	NA	NA	gi|460405912|ref|XP_004248418.1|//PREDICTED: protein CURVATURE THYLAKOID 1B, chloroplastic [Solanum lycopersicum]
Solyc02g083110.1.1	1431	458.320053859917	208.252293431957	-1.13802302869384	0.0255916742138641	Down	0.00858811103874379	NA	NA	NA	K06636//structural maintenance of chromosome 1	gi|460373476|ref|XP_004232545.1|//PREDICTED: uncharacterized protein LOC101250947 [Solanum lycopersicum]
Solyc08g065970.3.1	1994	958.005507475293	108.119123223931	-3.14741223218073	1.55716385754959e-10	Down	9.66987843550626e-12	NA	NA	NA	K03093//RNA polymerase sigma factor	gi|460399201|ref|XP_004245130.1|//PREDICTED: RNA polymerase sigma factor sigC [Solanum lycopersicum]
Solyc03g116820.3.1	2063	8.05237893322736	0.642262787851161	-3.64817944950527	0.0352379625264239	Down	0.0124031638637625	GO:0048500//signal recognition particle	GO:0003723//RNA binding;GO:0016462//pyrophosphatase activity;GO:0032561//guanyl ribonucleotide binding	GO:0006613//cotranslational protein targeting to membrane	K03106//signal recognition particle subunit SRP54 [EC:3.6.5.4]	gi|723686471|ref|XP_010318754.1|//PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101255783 [Solanum lycopersicum]
Solyc08g076470.3.1	1988	4582.54119942726	1280.40791567476	-1.83954435041983	2.25977541353015e-13	Down	9.15601563481167e-15	NA	GO:0008374//O-acyltransferase activity	NA	K00630//glycerol-3-phosphate O-acyltransferase [EC:2.3.1.15]	gi|723723658|ref|XP_010325300.1|//PREDICTED: glycerol-3-phosphate acyltransferase isoform X1 [Solanum lycopersicum]
Solyc03g118240.3.1	1506	5356.91622055152	726.523093602559	-2.88232217133806	8.20912758507996e-07	Down	9.42146408023751e-08	GO:0009536//plastid	GO:0008171//O-methyltransferase activity	GO:0006730//one-carbon metabolic process;GO:0006779//porphyrin-containing compound biosynthetic process	K03428//magnesium-protoporphyrin O-methyltransferase [EC:2.1.1.11]	gi|460380199|ref|XP_004235845.1|//PREDICTED: magnesium protoporphyrin IX methyltransferase, chloroplastic [Solanum lycopersicum]
Solyc12g099250.2.1	4370	834.085688471934	398.561378859128	-1.06539368643937	0.000145032952624438	Down	2.63652046350598e-05	NA	GO:0004674//protein serine/threonine kinase activity;GO:0004871//signal transducer activity	GO:0044260//cellular macromolecule metabolic process;GO:0044238//primary metabolic process	K04424//sterile alpha motif and leucine zipper containing kinase AZK [EC:2.7.11.25]	gi|460415156|ref|XP_004252926.1|//PREDICTED: RGS domain-containing serine/threonine-protein kinase A-like isoform X1 [Solanum lycopersicum]
Solyc11g072150.2.1	1152	178.384223724762	427.889511858206	1.2622502878611	1.37416013564081e-05	Up	2.00530674334046e-06	NA	NA	NA	K08066//nuclear transcription factor Y, gamma	gi|460411695|ref|XP_004251241.1|//PREDICTED: dr1-associated corepressor [Solanum lycopersicum]
Solyc02g085035.1.1	2511	59.6083031493417	12.7407930538811	-2.22605822384485	0.0209245786528275	Down	0.00678871077211161	NA	NA	NA	NA	gi|723672327|ref|XP_010316381.1|//PREDICTED: LOW QUALITY PROTEIN: auxilin-like protein 1 [Solanum lycopersicum]
Solyc10g074580.2.1	1360	4947.84265432904	1687.50140095522	-1.55191092221291	5.61016146213388e-06	Down	7.58254266501321e-07	NA	NA	NA	K14677//aminoacylase [EC:3.5.1.14]	gi|987996583|ref|NP_001306974.1|//virus resistant/susceptible lipocalin [Solanum lycopersicum]
Solyc04g058170.1.1	471	23.6311225628079	125.436839179156	2.40820104204068	5.42147872380723e-06	Up	7.30933671686699e-07	NA	NA	NA	K13448//calcium-binding protein CML	gi|460383274|ref|XP_004237355.1|//PREDICTED: probable calcium-binding protein CML44 [Solanum lycopersicum]
Solyc05g008540.3.1	1632	97.5847200149793	14.9774211025173	-2.70386603202628	1.21293971717949e-06	Down	1.44948737635211e-07	GO:0043231//intracellular membrane-bounded organelle;GO:0043234//protein complex	GO:0032559//adenyl ribonucleotide binding;GO:0003676//nucleic acid binding	GO:0006259//DNA metabolic process	K02606//origin recognition complex subunit 4	gi|460386378|ref|XP_004238875.1|//PREDICTED: origin recognition complex subunit 4 [Solanum lycopersicum]
Solyc07g008530.1.1	1566	540.855493479923	170.520763905561	-1.66529576080674	1.36040837481929e-05	Down	1.9827034238644e-06	NA	NA	NA	K01866//tyrosyl-tRNA synthetase [EC:6.1.1.1]	gi|460394424|ref|XP_004242803.1|//PREDICTED: probable tyrosine--tRNA ligase, mitochondrial [Solanum lycopersicum]
Solyc03g114180.3.1	4359	84.5321166852822	402.241854666396	2.25049172631595	2.63004132680114e-08	Up	2.30182534491169e-09	NA	NA	NA	K13496//UDP-glucosyl transferase 73C [EC:2.4.1.-]	gi|460380744|ref|XP_004236114.1|//PREDICTED: UDP-glycosyltransferase 90A1-like [Solanum lycopersicum]
Solyc10g081240.2.1	1683	5267.29093772765	1166.84555480095	-2.17444753197037	4.26747836394263e-08	Down	3.90034924272675e-09	GO:0044429//mitochondrial part	GO:0030554//adenyl nucleotide binding;GO:0042802//identical protein binding;GO:0003824//catalytic activity	GO:0044267//cellular protein metabolic process	K03687//molecular chaperone GrpE	gi|460407825|ref|XP_004249350.1|//PREDICTED: grpE protein homolog, mitochondrial [Solanum lycopersicum]
Solyc07g063240.3.1	6884	820.086447568597	1824.50846157614	1.15365994045409	0.000349230385170237	Up	6.92655016956474e-05	NA	NA	NA	K15377//solute carrier family 44 (choline transporter-like protein), member 2/4/5	gi|460397330|ref|XP_004244220.1|//PREDICTED: uncharacterized protein LOC101252606 isoform X1 [Solanum lycopersicum]
Solyc03g121560.3.1	4870	608.014381556478	195.95575370604	-1.63357751422906	0.000242084460138725	Down	4.62819142705949e-05	GO:0031224//intrinsic component of membrane	NA	NA	K17086//transmembrane 9 superfamily member 2/4	gi|460379704|ref|XP_004235601.1|//PREDICTED: transmembrane 9 superfamily member 4 [Solanum lycopersicum]
Solyc02g069060.3.1	2079	717.449038394564	2700.34560136892	1.91219579765708	5.37718072381566e-08	Up	4.99074847260362e-09	NA	NA	NA	K12236//transcriptional repressor NF-X1	gi|723676287|ref|XP_010317009.1|//PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like isoform X1 [Solanum lycopersicum];gi|723676281|ref|XP_010317007.1|//PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like isoform X1 [Solanum lycopersicum];gi|723676290|ref|XP_010317010.1|//PREDICTED: protein PHLOEM PROTEIN 2-LIKE A9-like isoform X2 [Solanum lycopersicum]
Solyc01g111980.3.1	2924	1825.44363338742	4543.27675392626	1.31548606843329	0.023202753562786	Up	0.00765151188198778	GO:0016020//membrane	NA	NA	K19476//vacuolar protein sorting-associated protein IST1;K14209//solute carrier family 36 (proton-coupled amino acid transporter);K15015//solute carrier family 32 (vesicular inhibitory amino acid transporter)	gi|460370473|ref|XP_004231077.1|//PREDICTED: lysine histidine transporter-like 8 [Solanum lycopersicum]
Solyc02g071475.1.1	1350	96.8255463585999	1254.84398449868	3.69597645697713	0.0186386638670487	Up	0.00593383137350765	NA	NA	NA	K04124//gibberellin 3-beta-dioxygenase [EC:1.14.11.15];K05278//flavonol synthase [EC:1.14.11.23];K06892//feruloyl-CoA ortho-hydroxylase [EC:1.14.11.-]	gi|565378250|ref|XP_006355572.1|//PREDICTED: protein SRG1-like [Solanum tuberosum]
Solyc04g072030.1.1	2028	388.984459196576	131.973092493768	-1.55946870364917	0.0334914155790384	Down	0.0117042975270548	NA	GO:0000166//nucleotide binding	NA	K14754//interferon-induced GTP-binding protein Mx1	gi|460384275|ref|XP_004237838.1|//PREDICTED: dynamin-related protein 4C [Solanum lycopersicum]
Solyc04g053120.3.1	2353	1469.97930938345	474.938818379311	-1.62998226608219	7.41993173817166e-07	Down	8.42721485247094e-08	GO:0009536//plastid	GO:0016740//transferase activity;GO:0004133//glycogen debranching enzyme activity;GO:0043167//ion binding	GO:0044238//primary metabolic process	K00705//4-alpha-glucanotransferase [EC:2.4.1.25]	gi|460383470|ref|XP_004237445.1|//PREDICTED: 4-alpha-glucanotransferase, chloroplastic/amyloplastic [Solanum lycopersicum]
Solyc06g009510.1.1	342	25.3452985307396	1.39152394578843	-4.1869805165232	2.53275464557341e-05	Down	3.91789614549339e-06	NA	NA	GO:0010467//gene expression	NA	gi|971565481|ref|XP_015168038.1|//PREDICTED: transcription factor UPBEAT1 [Solanum tuberosum]
Solyc05g010240.3.1	3938	1050.42173648602	436.807711980779	-1.26589844264989	0.00394564715560595	Down	0.00102465050443964	GO:0044424//intracellular part	GO:0032559//adenyl ribonucleotide binding	GO:0006457//protein folding	K04077//chaperonin GroEL	gi|747042317|ref|XP_011077788.1|//PREDICTED: chaperonin 60 subunit beta 4, chloroplastic isoform X1 [Sesamum indicum];gi|723698193|ref|XP_010320801.1|//PREDICTED: chaperonin 60 subunit beta 4, chloroplastic isoform X6 [Solanum lycopersicum];gi|723698184|ref|XP_010320798.1|//PREDICTED: ruBisCO large subunit-binding protein subunit beta, chloroplastic isoform X3 [Solanum lycopersicum];gi|723698181|ref|XP_010320797.1|//PREDICTED: ruBisCO large subunit-binding protein subunit beta, chloroplastic isoform X2 [Solanum lycopersicum]
Solyc04g079210.3.1	1116	1287.06413087788	189.19985020812	-2.76610108929841	0.00015074946137601	Down	2.75336350358749e-05	NA	NA	GO:0008152//metabolic process	NA	gi|723696639|ref|XP_010320535.1|//PREDICTED: patatin-like protein 2 [Solanum lycopersicum];gi|970021762|ref|XP_015072153.1|//PREDICTED: patatin-like protein 2 [Solanum pennellii]
Solyc08g007670.1.1	2235	69.2942044668186	13.1009738188116	-2.4030606414176	0.000351853735888256	Down	6.98251561752302e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13199//plasminogen activator inhibitor 1 RNA-binding protein	gi|460398072|ref|XP_004244588.1|//PREDICTED: subtilisin-like protease [Solanum lycopersicum]
Solyc04g081300.3.1	1989	879.746980946845	179.692885380295	-2.29155536900675	2.22413528327415e-06	Down	2.78555783204157e-07	GO:0016021//integral component of membrane	GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0008810//cellulase activity	GO:0044238//primary metabolic process;GO:0030245//cellulose catabolic process	K01179//endoglucanase [EC:3.2.1.4]	gi|460385306|ref|XP_004238345.1|//PREDICTED: endoglucanase 2-like [Solanum lycopersicum]
Solyc08g016750.3.1	2029	3086.39275748426	983.219789271356	-1.65033580483347	6.59824386789064e-05	Down	1.11025302134068e-05	NA	NA	NA	K00162//pyruvate dehydrogenase E1 component beta subunit [EC:1.2.4.1]	gi|460398525|ref|XP_004244808.1|//PREDICTED: pyruvate dehydrogenase E1 component subunit beta-3, chloroplastic-like [Solanum lycopersicum]
Solyc06g060610.2.1	1781	1053.04030825917	224.239327434758	-2.2314494333773	3.12566144050702e-09	Down	2.38257702618043e-10	NA	NA	NA	K00485//dimethylaniline monooxygenase (N-oxide forming) [EC:1.14.13.8]	gi|460392812|ref|XP_004242007.1|//PREDICTED: flavin-containing monooxygenase FMO GS-OX-like 4 [Solanum lycopersicum]
Solyc03g113010.2.1	2096	1065.69231923534	176.659434871665	-2.59274826473244	1.35345532925616e-07	Down	1.3495202794693e-08	NA	NA	NA	K06027//vesicle-fusing ATPase [EC:3.6.4.6]	gi|565354997|ref|XP_006344391.1|//PREDICTED: F-box/kelch-repeat protein At1g74510-like isoform X1 [Solanum tuberosum]
Solyc12g017420.2.1	4138	2595.4747411095	448.470800208165	-2.53291248774221	1.31447746140463e-26	Down	1.26410908395107e-28	NA	NA	NA	K05677//ATP-binding cassette, subfamily D (ALD), member 3;K20044//phosphatidylinositol-binding clathrin assembly protein	gi|460413159|ref|XP_004251962.1|//PREDICTED: ABC transporter D family member 2, chloroplastic [Solanum lycopersicum]
BGI_novel_G000242	4077	18.4925763504134	128.293837038213	2.79443373073082	1.8168669944735e-09	Up	1.33820231887567e-10	NA	NA	NA	K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|970066824|ref|XP_015060457.1|//PREDICTED: girdin-like [Solanum pennellii]
Solyc09g008640.1.1	1887	698.447527448376	111.60463453137	-2.64575479552078	3.96027350194021e-11	Down	2.24820953610218e-12	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|970052680|ref|XP_015087956.1|//PREDICTED: wall-associated receptor kinase-like 20 isoform X1 [Solanum pennellii]
Solyc01g058270.3.1	4858	389.786445747376	140.75723478364	-1.4694748465419	2.26778070379702e-07	Down	2.34825361381695e-08	NA	NA	NA	NA	gi|460366294|ref|XP_004229023.1|//PREDICTED: CAS1 domain-containing protein 1 [Solanum lycopersicum]
Solyc07g055470.3.1	1948	961.401787053127	244.032664321683	-1.9780652164656	0.000258788257483951	Down	4.98708547484726e-05	NA	NA	NA	K07428//cytochrome P450, family 4, subfamily X [EC:1.14.14.1];K07426//cytochrome P450, family 4, subfamily B, polypeptide 1 [EC:1.14.14.1]	gi|460395378|ref|XP_004243260.1|//PREDICTED: cytochrome P450 CYP72A219 [Solanum lycopersicum]
Solyc01g105220.3.1	2474	43.3547587765704	123.459120692468	1.5097711585411	0.00327472975769372	Up	0.000829546124693847	GO:0031224//intrinsic component of membrane;GO:0031967//organelle envelope	GO:0043169//cation binding;GO:0003824//catalytic activity	GO:0006091//generation of precursor metabolites and energy;GO:0032501//multicellular organismal process	K17893//ubiquinol oxidase [EC:1.10.3.11]	gi|460369506|ref|XP_004230603.1|//PREDICTED: ubiquinol oxidase, mitochondrial [Solanum lycopersicum]
Solyc11g065090.2.1	2149	1133.4894270288	561.201924093568	-1.0141790735681	0.00299110978160788	Down	0.000750007287195327	NA	NA	NA	NA	gi|460411005|ref|XP_004250905.1|//PREDICTED: probable magnesium transporter NIPA6 isoform X1 [Solanum lycopersicum];gi|460411007|ref|XP_004250906.1|//PREDICTED: probable magnesium transporter NIPA6 isoform X2 [Solanum lycopersicum]
Solyc03g005270.3.1	1230	828.253519565084	1711.71364579388	1.04729703810375	5.2182563749863e-06	Up	7.01200769040764e-07	NA	NA	NA	K20347//p24 family protein beta-1	gi|723678544|ref|XP_010317396.1|//PREDICTED: transmembrane emp24 domain-containing protein p24beta3 [Solanum lycopersicum]
Solyc11g065830.2.1	2148	8590.64948091618	393.667081215655	-4.4477192246665	9.0690015678053e-43	Down	2.23107985490961e-45	NA	NA	GO:0006810//transport	K03319//divalent anion:Na+ symporter, DASS family	gi|460411085|ref|XP_004250945.1|//PREDICTED: dicarboxylate transporter 1, chloroplastic [Solanum lycopersicum]
Solyc09g082700.2.1	681	21.9449419915502	2.7434766959998	-2.99981123039306	0.012653101083732	Down	0.00380941916852929	NA	NA	NA	NA	gi|970052797|ref|XP_015088017.1|//PREDICTED: early light-induced protein, chloroplastic-like [Solanum pennellii]
Solyc08g067640.1.1	219	0.799561666757956	7.01514510132076	3.13319173288752	0.0483053473021528	Up	0.017956956487415	NA	NA	NA	NA	NA
Solyc11g012510.2.1	2096	546.715133025598	3016.13212052812	2.46383841183052	1.40480428940654e-11	Up	7.38323411384831e-13	NA	NA	NA	K14494//DELLA protein	gi|902763359|ref|NP_001234305.2|//GRAS1 protein [Solanum lycopersicum]
Solyc05g014510.3.1	2615	1071.62198121923	412.78972765139	-1.37631710471609	0.00189641814586637	Down	0.000450706802521394	NA	NA	NA	K15502//serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A	gi|460387007|ref|XP_004239183.1|//PREDICTED: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B [Solanum lycopersicum]
Solyc05g023770.3.1	999	43.4313233707655	1.00926200165254	-5.42736326512837	0.000358576840990839	Down	7.12796441406048e-05	NA	NA	NA	NA	gi|970030494|ref|XP_015076530.1|//PREDICTED: coiled-coil domain-containing protein SCD2 [Solanum pennellii]
Solyc03g112460.3.1	1626	144.166182728983	6.70200957120061	-4.42699523209621	1.78000237752243e-10	Down	1.11996571241161e-11	NA	GO:0003824//catalytic activity	NA	K16903//L-tryptophan---pyruvate aminotransferase [EC:2.6.1.99]	gi|460381011|ref|XP_004236246.1|//PREDICTED: L-tryptophan--pyruvate aminotransferase 1-like [Solanum lycopersicum]
Solyc05g014120.1.1	744	54.9850818090778	301.757983139558	2.45627978430884	2.37643537665138e-05	Up	3.66102855662e-06	NA	GO:0016741//transferase activity, transferring one-carbon groups	GO:0006730//one-carbon metabolic process	NA	gi|460386972|ref|XP_004239166.1|//PREDICTED: uncharacterized protein LOC101254202 [Solanum lycopersicum]
Solyc06g007890.3.1	568	82.1015525575671	1.18632260880808	-6.11284120879705	8.23261023835908e-10	Down	5.77215590366536e-11	NA	NA	NA	K03860//phosphatidylinositol glycan, class Q;K20887	gi|698532137|ref|XP_009762897.1|//PREDICTED: gibberellin-regulated protein 5-like [Nicotiana sylvestris]
Solyc11g006140.1.1	1788	40.8161449105089	4.4158424309605	-3.20837932715693	0.000847839251559315	Down	0.000185350276218704	NA	NA	NA	K09518//DnaJ homolog subfamily B member 12;K09510//DnaJ homolog subfamily B member 4;K09511	gi|723740615|ref|XP_010312494.1|//PREDICTED: uncharacterized protein LOC104644449 [Solanum lycopersicum]
Solyc02g081920.3.1	3383	2225.84080784018	610.587923749695	-1.86607945358687	4.66142657780464e-07	Down	5.10657995831513e-08	GO:0009508//plastid chromosome;GO:0000427//plastid-encoded plastid RNA polymerase complex;GO:0009534//chloroplast thylakoid	GO:0016279//protein-lysine N-methyltransferase activity	GO:0018026//peptidyl-lysine monomethylation;GO:0042793//transcription from plastid promoter;GO:0009658//chloroplast organization;GO:0010027//thylakoid membrane organization	K00592//[ribulose-bisphosphate carboxylase]-lysine N-methyltransferase [EC:2.1.1.127];K19199//histone-lysine N-methyltransferase SETD3 [EC:2.1.1.43]	gi|460373641|ref|XP_004232623.1|//PREDICTED: uncharacterized protein LOC101252349 isoform X2 [Solanum lycopersicum];gi|565395071|ref|XP_006363171.1|//PREDICTED: protein PLASTID TRANSCRIPTIONALLY ACTIVE 14 isoform X2 [Solanum tuberosum]
Solyc05g043425.1.1	686	28.1766195514818	2.32195348342779	-3.60108756126212	0.0418073729703991	Down	0.0151440305101513	NA	GO:0003824//catalytic activity	NA	K01061//carboxymethylenebutenolidase [EC:3.1.1.45]	gi|970031109|ref|XP_015076839.1|//PREDICTED: protein usf [Solanum pennellii]
Solyc02g082100.3.1	4954	846.6795626517	323.83308986712	-1.38656565494074	6.04707347990615e-07	Down	6.76204727885734e-08	NA	NA	NA	K01931//protein neuralized [EC:2.3.2.27]	gi|460373606|ref|XP_004232606.1|//PREDICTED: uncharacterized protein LOC101246588 isoform X2 [Solanum lycopersicum]
Solyc11g068390.1.1	495	16.2432857728642	1.20682136935077	-3.75055944465863	0.00438025273558887	Down	0.00115335117504845	NA	NA	NA	NA	gi|970061753|ref|XP_015057741.1|//PREDICTED: uncharacterized protein LOC107004035, partial [Solanum pennellii]
Solyc02g071580.3.1	5435	812.643229001085	224.106627870749	-1.85843679490993	8.33653523080977e-07	Down	9.59876149096891e-08	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13199//plasminogen activator inhibitor 1 RNA-binding protein;K20858;K12663//Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase [EC:5.3.3.-];K01183//chitinase [EC:3.2.1.14]	gi|460374349|ref|XP_004232973.1|//PREDICTED: subtilisin-like protease SBT5.3 [Solanum lycopersicum]
Solyc07g005380.3.1	869	4.78678812431775	115.063862839658	4.58723304898378	3.20674659830723e-10	Up	2.10731111257479e-11	NA	NA	NA	NA	gi|460393960|ref|XP_004242575.1|//PREDICTED: S-norcoclaurine synthase-like [Solanum lycopersicum]
Solyc08g008290.3.1	1080	847.949866218455	2420.05933556455	1.51299154504595	0.00972095258667053	Up	0.00283171479293388	NA	NA	NA	NA	gi|350538997|ref|NP_001234113.1|//uncharacterized protein LOC778318 precursor [Solanum lycopersicum]
Solyc03g046380.1.1	243	38.7717446986971	218.830880268471	2.49673877623954	0.00591619093815416	Up	0.0016193003600293	NA	NA	NA	NA	gi|460377849|ref|XP_004234699.1|//PREDICTED: uncharacterized protein LOC101259411 [Solanum lycopersicum]
Solyc08g007930.2.1	940	0.818645451563107	92.5806703863717	6.82132843106768	5.20502020480591e-11	Up	3.0091644318078e-12	NA	NA	NA	K14411//RNA-binding protein Musashi	gi|970046488|ref|XP_015084753.1|//PREDICTED: protein IQ-DOMAIN 31-like [Solanum pennellii]
Solyc06g076690.3.1	2098	346.129655617712	774.768723361184	1.16245316126456	1.00573942867033e-05	Up	1.43093312928084e-06	NA	NA	NA	K17362//acyl-coenzyme A thioesterase 13 [EC:3.1.2.-]	gi|460391146|ref|XP_004241184.1|//PREDICTED: acyl-coenzyme A thioesterase 13-like [Solanum lycopersicum]
Solyc08g081960.2.1	1005	115.760588082614	16.9704655335843	-2.77004610959915	0.00920837239162123	Down	0.00266235538255198	NA	NA	NA	K13434//pathogenesis-related genes transcriptional activator PTI6	gi|460400037|ref|XP_004245542.1|//PREDICTED: ethylene-responsive transcription factor CRF1 [Solanum lycopersicum]
Solyc05g007140.3.1	2907	2159.4138811507	4887.71430804439	1.17852017854127	0.0104365305355302	Up	0.00306428175892244	NA	GO:0004713//protein tyrosine kinase activity;GO:0032559//adenyl ribonucleotide binding	GO:0006464//cellular protein modification process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460386177|ref|XP_004238776.1|//PREDICTED: protein kinase 2B, chloroplastic-like [Solanum lycopersicum]
Solyc06g065740.3.1	1327	339.544976469054	1067.7174893357	1.65285537730985	1.97013396206483e-09	Up	1.46137117359066e-10	GO:0031224//intrinsic component of membrane;GO:0012505//endomembrane system;GO:0044431//Golgi apparatus part	NA	GO:0048193//Golgi vesicle transport	K08495//golgi SNAP receptor complex member 1	gi|460392384|ref|XP_004241796.1|//PREDICTED: Golgi SNAP receptor complex member 1-1 [Solanum lycopersicum]
Solyc12g049380.2.1	2361	5.61267019469514	0.354400974461996	-3.98523281194527	0.0144401615761159	Down	0.00443135641296862	NA	NA	NA	NA	gi|460414318|ref|XP_004252519.1|//PREDICTED: uncharacterized protein LOC101266104 [Solanum lycopersicum]
Solyc07g015860.3.1	1450	2171.21641795517	603.492964258666	-1.84709467832461	2.89667049572467e-07	Down	3.06208346722647e-08	GO:0009505//plant-type cell wall;GO:0009532//plastid stroma;GO:0005739//mitochondrion;GO:0009570//chloroplast stroma	GO:0042586//peptide deformylase activity;GO:0005506//iron ion binding;GO:0046914//transition metal ion binding;GO:0016811//hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	GO:0010467//gene expression;GO:0006412//translation;GO:0043686//co-translational protein modification	K01462//peptide deformylase [EC:3.5.1.88]	gi|350535372|ref|NP_001234703.1|//peptide deformylase 1A, chloroplastic [Solanum lycopersicum]
Solyc02g089770.3.1	1582	207.487410853453	3.53531642976307	-5.87504064467558	1.83771899380187e-13	Down	7.36375398217167e-15	NA	NA	NA	K09753//cinnamoyl-CoA reductase [EC:1.2.1.44]	gi|460372564|ref|XP_004232099.1|//PREDICTED: dihydroflavonol-4-reductase-like isoform X2 [Solanum lycopersicum]
Solyc09g098330.3.1	2153	530.659775868389	170.215521872023	-1.64042459458863	3.28772283160758e-07	Down	3.50978015123158e-08	NA	NA	NA	K18643//katanin p80 WD40 repeat-containing subunit B1;K03841//fructose-1,6-bisphosphatase I [EC:3.1.3.11];K16482//centriolar protein POC1;K12662//U4/U6 small nuclear ribonucleoprotein PRP4	gi|460405053|ref|XP_004247992.1|//PREDICTED: uncharacterized WD repeat-containing protein C2A9.03 [Solanum lycopersicum]
Solyc09g098150.3.1	1368	614.148299282611	2687.31974674489	2.12950901604439	0.000362913993348756	Up	7.22364963650797e-05	NA	GO:0004175//endopeptidase activity	GO:0019538//protein metabolic process	K12603//CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4];K14848//ribosome assembly protein RRB1;K06636//structural maintenance of chromosome 1	gi|525314064|ref|NP_001266198.1|//metacaspase 1 [Solanum lycopersicum]
Solyc11g045210.2.1	1839	212.649201203367	903.363646892147	2.08683142246657	7.51123495942056e-15	Up	2.47220086073071e-16	NA	NA	NA	K20185//biogenesis of lysosome-related organelles complex 1 subunit 1;K02987//small subunit ribosomal protein S4e	gi|460410717|ref|XP_004250767.1|//PREDICTED: uncharacterized protein LOC101257729 isoform X1 [Solanum lycopersicum];gi|723744170|ref|XP_010313103.1|//PREDICTED: uncharacterized protein LOC101257729 isoform X2 [Solanum lycopersicum]
Solyc07g052240.3.1	2116	218.561663445312	33.6679073064698	-2.69859441337273	0.00248393097103953	Down	0.000609316748188874	NA	GO:0016682//oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor;GO:0046914//transition metal ion binding	GO:0008152//metabolic process	K19791//iron transport multicopper oxidase	gi|723715779|ref|XP_010323833.1|//PREDICTED: L-ascorbate oxidase homolog [Solanum lycopersicum]
Solyc06g007190.3.1	1879	660.09892179241	10402.1751613205	3.97805918487195	1.67597001074475e-06	Up	2.05654289375716e-07	GO:0043234//protein complex	GO:0043169//cation binding;GO:0004721//phosphoprotein phosphatase activity	GO:0006464//cellular protein modification process	K17506//protein phosphatase 1L [EC:3.1.3.16]	gi|460389536|ref|XP_004240408.1|//PREDICTED: putative protein phosphatase 2C 53 [Solanum lycopersicum]
Solyc07g043390.3.1	2280	20451.0563890211	1635.42463015172	-3.64443818846386	5.59905961749568e-05	Down	9.2705467500059e-06	NA	NA	NA	K10999//cellulose synthase A [EC:2.4.1.12]	gi|460396147|ref|XP_004243640.1|//PREDICTED: cellulose synthase-like protein G2 [Solanum lycopersicum]
Solyc01g016360.2.1	3876	49.3546889895657	397.362063275016	3.00919508206959	6.75733341531043e-15	Up	2.20895385613063e-16	NA	NA	NA	K19613//leucine-rich repeat protein SHOC2;K10406//kinesin family member C2/C3;K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|723655773|ref|XP_010315920.1|//PREDICTED: receptor-like protein 12 isoform X3 [Solanum lycopersicum];gi|55139525|gb|AAV41396.1|//peru 2 [Solanum peruvianum]
Solyc02g091680.3.1	2746	450.5959530146	89.7890173367504	-2.32722346049603	1.13123595628309e-05	Down	1.62044870284625e-06	NA	GO:0016798//hydrolase activity, acting on glycosyl bonds	GO:0008152//metabolic process	K15920//beta-D-xylosidase 4 [EC:3.2.1.37]	gi|460372307|ref|XP_004231972.1|//PREDICTED: probable beta-D-xylosidase 6 [Solanum lycopersicum]
Solyc07g052610.3.1	800	1738.43539720276	41.3886096563834	-5.39241185942012	6.46538637982217e-32	Down	3.97640059889168e-34	NA	NA	NA	K01647//citrate synthase [EC:2.3.3.1]	gi|460395770|ref|XP_004243454.1|//PREDICTED: cyclin-U1-1 [Solanum lycopersicum]
Solyc01g091800.3.1	1494	1637.04215665226	608.754838894238	-1.42715823406619	1.91451642284924e-07	Down	1.96033122616925e-08	NA	NA	NA	K14191//18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:2.1.1.183]	gi|460370671|ref|XP_004231174.1|//PREDICTED: probable dimethyladenosine transferase [Solanum lycopersicum]
Solyc07g053540.1.1	744	711.626212453342	80.8473886150704	-3.13784657239156	6.44943505662554e-16	Down	1.87751930044153e-17	NA	NA	NA	NA	gi|460395645|ref|XP_004243392.1|//PREDICTED: fasciclin-like arabinogalactan protein 9 [Solanum lycopersicum]
Solyc02g082360.3.1	1073	147.171007286707	37.8307093168038	-1.95986375627687	1.71225806491334e-05	Down	2.55102709313353e-06	GO:0005730//nucleolus;GO:0005737//cytoplasm	GO:0043022//ribosome binding;GO:0003743//translation initiation factor activity;GO:0043023//ribosomal large subunit binding	GO:0006413//translational initiation;GO:0042256//mature ribosome assembly;GO:0042273//ribosomal large subunit biogenesis	K03264//translation initiation factor 6	gi|723673315|ref|XP_010316489.1|//PREDICTED: eukaryotic translation initiation factor 6-2-like isoform X3 [Solanum lycopersicum];gi|971581959|ref|XP_015159631.1|//PREDICTED: eukaryotic translation initiation factor 6-2-like [Solanum tuberosum];gi|460373568|ref|XP_004232588.1|//PREDICTED: eukaryotic translation initiation factor 6-2-like isoform X1 [Solanum lycopersicum];gi|970005731|ref|XP_015063706.1|//PREDICTED: eukaryotic translation initiation factor 6-2-like [Solanum pennellii]
Solyc12g009440.2.1	649	5434.51529246267	2608.71090516087	-1.05881429125851	0.00711437927600732	Down	0.00199445529054909	NA	GO:0005515//protein binding	NA	NA	gi|460412661|ref|XP_004251716.1|//PREDICTED: uncharacterized protein LOC101257241 [Solanum lycopersicum]
Solyc11g051160.2.1	2529	2662.66519427149	665.520115909613	-2.00031685569307	5.68595586294643e-06	Down	7.69770079552014e-07	NA	NA	NA	K19996//phosphatidylinositol transfer protein SFH5	gi|460410883|ref|XP_004250845.1|//PREDICTED: patellin-3-like [Solanum lycopersicum]
Solyc04g077170.3.1	1646	37.2320730742815	4.87281672607767	-2.93371808064745	0.00145731914798868	Down	0.000336245919414414	NA	NA	NA	NA	gi|460384711|ref|XP_004238053.1|//PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 2 [Solanum lycopersicum]
Solyc06g005940.3.1	2374	1654.68145432576	14679.6091142412	3.14918813980813	1.04016045311321e-11	Up	5.37760007629349e-13	NA	GO:0003824//catalytic activity	NA	K09580//protein disulfide-isomerase A1 [EC:5.3.4.1]	gi|460389504|ref|XP_004240392.1|//PREDICTED: protein disulfide-isomerase-like [Solanum lycopersicum]
Solyc02g084450.3.1	4545	222.218829725405	32.7587739403667	-2.76202780126767	1.48057552773924e-06	Down	1.79580765143264e-07	NA	NA	NA	K19613//leucine-rich repeat protein SHOC2;K15078//structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]	gi|723672497|ref|XP_010316405.1|//PREDICTED: putative disease resistance protein RGA3 [Solanum lycopersicum]
Solyc07g006420.1.1	912	17.1584588453735	80.0685991744479	2.22231658870047	0.0274062172121323	Up	0.00927978519289584	NA	NA	NA	NA	gi|661893107|emb|CDP02916.1|//unnamed protein product [Coffea canephora]
Solyc03g120810.3.1	3056	795.395356261857	2163.24658521476	1.44345408087703	0.000232397800241104	Up	4.42567601547562e-05	GO:0015630//microtubule cytoskeleton	GO:0032559//adenyl ribonucleotide binding;GO:0003774//motor activity	GO:0007017//microtubule-based process	K10393//kinesin family member 2/24	gi|723685177|ref|XP_010318536.1|//PREDICTED: kinesin-13A [Solanum lycopersicum]
Solyc11g027710.1.1	808	693.6326774593	4387.13491654058	2.66103530238631	0.0106102531598451	Up	0.0031239894777701	NA	NA	NA	K01191//alpha-mannosidase [EC:3.2.1.24]	gi|947068961|gb|KRH17852.1|//hypothetical protein GLYMA_13G021700, partial [Glycine max];gi|763744275|gb|KJB11774.1|//hypothetical protein B456_001G276600 [Gossypium raimondii]
Solyc03g044220.1.1	1650	283.530406953413	1088.9953716873	1.94142245344679	1.86795190772945e-06	Up	2.30952604664477e-07	NA	NA	NA	K10268//F-box and leucine-rich repeat protein 2/20;K10273//F-box and leucine-rich repeat protein 7	gi|460377770|ref|XP_004234661.1|//PREDICTED: F-box protein SKIP2-like [Solanum lycopersicum]
Solyc11g044560.2.1	1805	1045.8880308819	2510.93119622042	1.2634940868949	2.69027007018311e-05	Up	4.18361664410464e-06	NA	GO:0043565//sequence-specific DNA binding;GO:0003700//transcription factor activity, sequence-specific DNA binding	GO:0006355//regulation of transcription, DNA-templated	K14432//ABA responsive element binding factor	gi|902763261|ref|NP_001239043.2|//ABA responsive transcription factor [Solanum lycopersicum]
Solyc10g012240.3.1	929	723.068974924762	264.579072211854	-1.45043432394201	0.000761501367860784	Down	0.000164431840764035	NA	GO:0016879//ligase activity, forming carbon-nitrogen bonds;GO:0032559//adenyl ribonucleotide binding	GO:0006464//cellular protein modification process	K10576//ubiquitin-conjugating enzyme E2 H [EC:2.3.2.23]	gi|460405172|ref|XP_004248050.1|//PREDICTED: ubiquitin-conjugating enzyme E2-23 kDa-like [Solanum lycopersicum]
Solyc02g083835.1.1	552	444.136024989113	1095.15091149955	1.3020561847277	0.00914992933852341	Up	0.00264320681279098	NA	GO:0005515//protein binding	NA	K03686//molecular chaperone DnaJ	gi|460373370|ref|XP_004232493.1|//PREDICTED: chaperone protein dnaJ 11, chloroplastic [Solanum lycopersicum]
Solyc07g051820.3.1	2572	2990.13088318305	98.2732230083452	-4.92726645297922	7.64372070412348e-14	Down	2.91468848975634e-15	GO:0016020//membrane	GO:0016757//transferase activity, transferring glycosyl groups	GO:0009987//cellular process	K10999//cellulose synthase A [EC:2.4.1.12]	gi|460395838|ref|XP_004243487.1|//PREDICTED: cellulose synthase-like protein H1 [Solanum lycopersicum]
Solyc09g011270.3.1	1152	43.4686496103333	259.682564841309	2.57870197142047	0.0425736014863677	Up	0.0154755390522983	NA	NA	NA	K03283//heat shock 70kDa protein 1/8;K17609//nucleoredoxin [EC:1.8.1.8];K16219//protein N-terminal methyltransferase [EC:2.1.1.244]	gi|723729057|ref|XP_004246862.2|//PREDICTED: uncharacterized protein LOC101250920 [Solanum lycopersicum]
Solyc10g045240.2.1	1752	391.395012582182	74.737155159868	-2.38872781803118	7.79714161819587e-05	Down	1.32849017208787e-05	NA	GO:0016798//hydrolase activity, acting on glycosyl bonds	GO:0008152//metabolic process	K01188//beta-glucosidase [EC:3.2.1.21]	gi|460406763|ref|XP_004248829.1|//PREDICTED: vicianin hydrolase-like [Solanum lycopersicum]
Solyc11g020330.1.1	573	64.2456273260411	2.10841431484072	-4.92936796786501	2.65817866066207e-06	Down	3.38861302350689e-07	NA	NA	NA	K13993//HSP20 family protein	gi|926657629|ref|NP_001234600.2|//small heat shock protein precursor [Solanum lycopersicum]
Solyc01g007890.2.1	1309	785.023991277259	236.122981639315	-1.73319828055092	1.36083051413393e-12	Down	6.17314274526983e-14	NA	NA	NA	NA	gi|723655453|ref|XP_004228560.2|//PREDICTED: probable cyclin-dependent serine/threonine-protein kinase DDB_G0292550, partial [Solanum lycopersicum]
Solyc06g076110.1.1	522	148.958234774953	12.3004031435836	-3.59813037596454	8.79831418857507e-13	Down	3.89607770091963e-14	NA	NA	NA	K00430//peroxidase [EC:1.11.1.7];K19519//transforming growth factor-beta-induced protein	gi|460391236|ref|XP_004241229.1|//PREDICTED: fasciclin-like arabinogalactan protein 4 [Solanum lycopersicum]
Solyc09g064440.3.1	7418	914.782039550772	7386.38428479145	3.01336837642998	5.82025540286387e-10	Up	3.97880885971833e-11	NA	NA	NA	K05666//ATP-binding cassette, subfamily C (CFTR/MRP), member 2;K05665//ATP-binding cassette, subfamily C (CFTR/MRP), member 1	gi|460403294|ref|XP_004247127.1|//PREDICTED: ABC transporter C family member 5 [Solanum lycopersicum]
Solyc06g076470.3.1	1112	1210.11382078007	167.095738202448	-2.8563959079013	1.05855419155067e-12	Down	4.73484803138813e-14	NA	NA	NA	K06700//proteasome inhibitor subunit 1 (PI31)	gi|460391186|ref|XP_004241204.1|//PREDICTED: uncharacterized protein LOC101267414 isoform X1 [Solanum lycopersicum];gi|460391188|ref|XP_004241205.1|//PREDICTED: uncharacterized protein LOC101267414 isoform X2 [Solanum lycopersicum]
Solyc04g082980.2.1	5843	11717.8484578954	61313.4781404982	2.38749654958553	0.0335993930800133	Up	0.0117500188562951	NA	NA	NA	K12600//superkiller protein 3	gi|723696486|ref|XP_010320493.1|//PREDICTED: tetratricopeptide repeat protein 37 [Solanum lycopersicum];gi|698482288|ref|XP_009788078.1|//PREDICTED: tetratricopeptide repeat protein 37 isoform X1 [Nicotiana sylvestris]
Solyc01g091190.3.1	2400	3208.48765686864	8389.32156040234	1.38666071231491	3.03671803763903e-05	Up	4.76765184677784e-06	GO:0009536//plastid	GO:0016765//transferase activity, transferring alkyl or aryl (other than methyl) groups	GO:0008652//cellular amino acid biosynthetic process;GO:0006950//response to stress	K00800//3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]	gi|822092669|ref|NP_001295876.1|//3-phosphoshikimate 1-carboxyvinyltransferase, chloroplastic [Solanum lycopersicum]
Solyc11g044800.2.1	1926	398.433324263357	1112.00539641793	1.4807535672463	7.77587109567984e-07	Up	8.86045845366531e-08	NA	NA	NA	K07053//3',5'-nucleoside bisphosphate phosphatase [EC:3.1.3.97]	gi|460410683|ref|XP_004250751.1|//PREDICTED: uncharacterized protein LOC101252552 [Solanum lycopersicum]
Solyc10g039290.2.1	4853	946.820032516342	263.608878107649	-1.84469127065394	0.000660374270402819	Down	0.000140207687647773	NA	NA	NA	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460406127|ref|XP_004248524.1|//PREDICTED: protein NRT1/ PTR FAMILY 4.5 [Solanum lycopersicum]
Solyc01g009070.3.1	2350	574.750960156989	180.404707623623	-1.67169998514275	1.24998639607941e-05	Down	1.80458195876828e-06	NA	GO:0003677//DNA binding	NA	K09422//myb proto-oncogene protein, plant	gi|930697422|ref|NP_001234357.2|//GAMyb-like1 [Solanum lycopersicum]
Solyc11g071870.2.1	1307	181.697171219071	438.566529117431	1.27125975249853	5.30040896632907e-05	Up	8.72469285645936e-06	GO:0005737//cytoplasm	GO:0016879//ligase activity, forming carbon-nitrogen bonds;GO:0061630//ubiquitin protein ligase activity;GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0031625//ubiquitin protein ligase binding	GO:0006464//cellular protein modification process;GO:0006511//ubiquitin-dependent protein catabolic process;GO:0016567//protein ubiquitination	K10576//ubiquitin-conjugating enzyme E2 H [EC:2.3.2.23]	gi|460411655|ref|XP_004251221.1|//PREDICTED: ubiquitin-conjugating enzyme E2-23 kDa-like [Solanum lycopersicum]
Solyc02g083750.1.1	1266	542.110682809127	1894.02482081257	1.80479589515612	1.34070883327337e-05	Up	1.95199370164223e-06	NA	NA	NA	NA	gi|460373382|ref|XP_004232499.1|//PREDICTED: mediator-associated protein 1 [Solanum lycopersicum]
Solyc08g074550.3.1	2609	1158.13154365844	4854.3842827169	2.06748919184851	1.37208068360669e-09	Up	9.92185972192107e-11	GO:0044424//intracellular part	GO:0032559//adenyl ribonucleotide binding;GO:0004812//aminoacyl-tRNA ligase activity	GO:0006418//tRNA aminoacylation for protein translation	K01868//threonyl-tRNA synthetase [EC:6.1.1.3]	gi|460401095|ref|XP_004246064.1|//PREDICTED: threonine--tRNA ligase, mitochondrial-like [Solanum lycopersicum];gi|971564311|ref|XP_015167730.1|//PREDICTED: threonine--tRNA ligase, mitochondrial 1-like isoform X1 [Solanum tuberosum]
Solyc08g066770.3.1	2768	852.304354212763	11239.749134881	3.72109732287959	6.59929018589882e-15	Up	2.14991040050528e-16	NA	NA	NA	K15502//serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A	gi|698521971|ref|XP_009757797.1|//PREDICTED: ankyrin repeat-containing protein At5g02620-like [Nicotiana sylvestris];gi|460399293|ref|XP_004245176.1|//PREDICTED: ankyrin repeat-containing protein At5g02620-like [Solanum lycopersicum]
Solyc08g080640.2.1	744	46.4893315466483	855.264128114686	4.2013984439541	6.55076011015511e-06	Up	8.97591850489421e-07	GO:0043231//intracellular membrane-bounded organelle	NA	GO:0006952//defense response;GO:0001906//cell killing	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|806776583|ref|NP_001292922.1|//protein NP24 precursor [Solanum lycopersicum]
Solyc05g026140.3.1	1843	1099.72335325718	235.881216105553	-2.22100820224511	1.10338340989665e-05	Down	1.57808339934898e-06	NA	NA	NA	K00620//glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]	gi|723700247|ref|XP_010321130.1|//PREDICTED: protein root UVB sensitive 2, chloroplastic isoform X1 [Solanum lycopersicum];gi|723700253|ref|XP_010321132.1|//PREDICTED: protein root UVB sensitive 2, chloroplastic isoform X3 [Solanum lycopersicum];gi|971534504|ref|XP_015161485.1|//PREDICTED: protein root UVB sensitive 2, chloroplastic isoform X2 [Solanum tuberosum];gi|723700250|ref|XP_010321131.1|//PREDICTED: protein root UVB sensitive 2, chloroplastic isoform X2 [Solanum lycopersicum]
Solyc08g008630.3.1	1279	8009.82241415965	1283.32783774551	-2.64188048993015	6.95569480436744e-12	Down	3.49236652060644e-13	NA	NA	NA	K17911//beta-carotene isomerase [EC:5.2.1.14]	gi|460398215|ref|XP_004244658.1|//PREDICTED: beta-carotene isomerase D27, chloroplastic [Solanum lycopersicum]
Solyc02g071100.3.1	1302	132.515349178352	15.2563838391622	-3.11867452445301	1.60613418157276e-08	Down	1.36319052163455e-09	NA	NA	NA	NA	gi|460374576|ref|XP_004233086.1|//PREDICTED: probable purine permease 10 [Solanum lycopersicum]
Solyc04g082160.3.1	3416	1510.67513098713	4468.4788451616	1.56459035037677	1.36820641423228e-05	Up	1.99559851606192e-06	GO:0005829//cytosol	NA	NA	K08770//ubiquitin C	gi|723696216|ref|XP_010320449.1|//PREDICTED: large proline-rich protein BAG6 isoform X1 [Solanum lycopersicum];gi|460385433|ref|XP_004238408.1|//PREDICTED: large proline-rich protein BAG6 isoform X2 [Solanum lycopersicum]
Solyc02g094000.1.1	426	65.4251729230191	1652.9885693417	4.65908710557585	7.6200300849754e-07	Up	8.67719990666462e-08	NA	GO:0046872//metal ion binding	NA	K13448//calcium-binding protein CML	gi|460371934|ref|XP_004231789.1|//PREDICTED: putative calcium-binding protein CML19 [Solanum lycopersicum]
Solyc12g009110.2.1	2165	4.38441068794998	29.3385930440234	2.74234484001055	0.0128690056039993	Up	0.00388353471634032	NA	NA	NA	K13262//isoflavone-7-O-methyltransferase [EC:2.1.1.150];K16040//trans-resveratrol di-O-methyltransferase [EC:2.1.1.240];K13259//2,7,4'-trihydroxyisoflavanone 4'-O-methyltransferase / isoflavone 4'-O-methyltransferase [EC:2.1.1.212 2.1.1.46]	gi|460412607|ref|XP_004251689.1|//PREDICTED: 3'-hydroxy-N-methyl-(S)-coclaurine 4'-O-methyltransferase-like [Solanum lycopersicum]
Solyc10g079600.2.1	1286	518.06040076697	90.074494747358	-2.52392975251117	0.000937276732097453	Down	0.000207313259589469	NA	NA	NA	K14492//two-component response regulator ARR-A family	gi|460407596|ref|XP_004249238.1|//PREDICTED: two-component response regulator ARR9 [Solanum lycopersicum]
Solyc12g009550.1.1	2748	144.866857498446	1783.61071379588	3.62200129141267	7.54904725124503e-07	Up	8.58735830473906e-08	NA	NA	NA	K10406//kinesin family member C2/C3;K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|970067161|ref|XP_015060661.1|//PREDICTED: receptor-like protein 12 [Solanum pennellii];gi|970064679|ref|XP_015059311.1|//PREDICTED: receptor-like protein 12 [Solanum pennellii]
Solyc03g113250.3.1	2055	77.2772520951374	5.68756011586618	-3.76416199997434	2.43519009511694e-10	Down	1.56034433185702e-11	NA	NA	NA	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460381576|ref|XP_004236524.1|//PREDICTED: protein NRT1/ PTR FAMILY 4.6 [Solanum lycopersicum]
Solyc06g082410.1.1	378	29.4395936979597	1.93081509251586	-3.93047584649228	0.000215349209079549	Down	4.07853485661692e-05	NA	NA	NA	K14794//ribosomal RNA-processing protein 12	gi|460393789|ref|XP_004242491.1|//PREDICTED: uncharacterized protein LOC101248212 [Solanum lycopersicum]
Solyc11g068440.2.1	1865	402.027936001194	4231.93054292137	3.39594828966039	4.32387685862691e-22	Up	6.49516316544895e-24	NA	NA	NA	K19891//glucan endo-1,3-beta-glucosidase 1/2/3 [EC:3.2.1.39]	gi|723745494|ref|XP_010313365.1|//PREDICTED: glucan endo-1,3-beta-glucosidase 14 [Solanum lycopersicum]
Solyc06g036130.3.1	2031	2167.56726230748	160.030279231297	-3.75965995526323	2.50221375625516e-38	Down	8.76726155837131e-41	GO:0044464//cell part	GO:0015291//secondary active transmembrane transporter activity	GO:0015893//drug transport	K03327//multidrug resistance protein, MATE family	gi|460390191|ref|XP_004240722.1|//PREDICTED: protein TRANSPARENT TESTA 12 isoform X1 [Solanum lycopersicum];gi|970031924|ref|XP_015077259.1|//PREDICTED: protein DETOXIFICATION 35-like [Solanum pennellii]
Solyc10g079070.2.1	2340	2686.69146922487	378.714676461187	-2.82664741984977	4.38822288040754e-14	Down	1.62750923140208e-15	NA	NA	NA	K16189//phytochrome-interacting factor 4;K11253//histone H3;K12126//phytochrome-interacting factor 3	gi|460407502|ref|XP_004249191.1|//PREDICTED: transcription factor bHLH48-like [Solanum lycopersicum]
Solyc01g090790.3.1	2057	4055.27589134825	854.330555022728	-2.24693378198824	7.03327144043253e-12	Down	3.53393838590393e-13	NA	NA	NA	K16189//phytochrome-interacting factor 4;K12126//phytochrome-interacting factor 3	gi|460367846|ref|XP_004229781.1|//PREDICTED: transcription factor UNE10 [Solanum lycopersicum]
Solyc04g057870.3.1	1605	2529.56006386449	768.294491991329	-1.71915518011063	6.14047084268555e-15	Down	1.98441487274802e-16	NA	NA	NA	NA	gi|460383300|ref|XP_004237366.1|//PREDICTED: uncharacterized protein LOC101249346 [Solanum lycopersicum]
Solyc04g051800.3.1	2815	38126.3598144957	1468.91264690674	-4.69796828406283	1.15437664435232e-25	Down	1.20480639786286e-27	NA	GO:0032559//adenyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity	GO:0009207//purine ribonucleoside triphosphate catabolic process	K06185//ATP-binding cassette, subfamily F, member 2	gi|460383504|ref|XP_004237462.1|//PREDICTED: ABC transporter F family member 5 [Solanum lycopersicum]
Solyc09g074250.3.1	2089	219.019019787038	579.19041746535	1.40298157359544	0.00796472113884237	Up	0.00226310677362872	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460404014|ref|XP_004247480.1|//PREDICTED: receptor-like cytosolic serine/threonine-protein kinase RBK2 isoform X2 [Solanum lycopersicum]
Solyc05g012100.3.1	3174	2011.88877636955	353.13635073101	-2.51025331027742	5.66042456660259e-06	Down	7.6568066021324e-07	NA	NA	NA	K13941//2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase / dihydropteroate synthase [EC:2.7.6.3 2.5.1.15];K00847//fructokinase [EC:2.7.1.4]	gi|565363906|ref|XP_006348670.1|//PREDICTED: fructokinase-like 2, chloroplastic [Solanum tuberosum];gi|460386702|ref|XP_004239035.1|//PREDICTED: fructokinase-like 2, chloroplastic [Solanum lycopersicum]
Solyc10g079200.2.1	1700	9371.13964390573	593.095886593151	-3.98188723656947	2.83086100140749e-37	Down	1.09739654147301e-39	GO:0031224//intrinsic component of membrane	NA	GO:0051234//establishment of localization	K15109//solute carrier family 25 (mitochondrial carnitine/acylcarnitine transporter), member 20/29	gi|697185123|ref|XP_009601585.1|//PREDICTED: mitochondrial carnitine/acylcarnitine carrier-like protein [Nicotiana tomentosiformis];gi|460407528|ref|XP_004249204.1|//PREDICTED: mitochondrial carnitine/acylcarnitine carrier-like protein [Solanum lycopersicum]
Solyc09g091990.3.1	1645	138.07565798711	992.692173794874	2.84588741601168	9.29045712268922e-05	Up	1.61062755619605e-05	NA	GO:0000166//nucleotide binding;GO:0004672//protein kinase activity	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723732934|ref|XP_010326838.1|//PREDICTED: receptor like protein kinase S.2 [Solanum lycopersicum]
Solyc08g079630.3.1	1278	277.731901589492	117.109230658506	-1.24583810651105	0.00385303932707234	Down	0.000998535703924336	NA	NA	NA	NA	gi|460400350|ref|XP_004245698.1|//PREDICTED: uncharacterized protein LOC101260750 [Solanum lycopersicum]
Solyc10g012080.3.1	2032	530.207293847189	13589.0416510803	4.67974338842298	2.61238562580069e-16	Up	7.25446284188725e-18	NA	NA	NA	K02184//formin 2	gi|565385553|ref|XP_006358666.1|//PREDICTED: uncharacterized protein LOC102600964 [Solanum tuberosum];gi|970055984|ref|XP_015089639.1|//PREDICTED: uncharacterized protein LOC107032545 [Solanum pennellii];gi|697133861|ref|XP_009620977.1|//PREDICTED: uncharacterized protein LOC104112688 [Nicotiana tomentosiformis]
Solyc10g074570.2.1	2339	443.990948136247	3217.26322716291	2.8572318089029	3.73942276614833e-09	Up	2.90060339061975e-10	GO:0016020//membrane	GO:0046872//metal ion binding;GO:0004674//protein serine/threonine kinase activity;GO:0032559//adenyl ribonucleotide binding	GO:0006464//cellular protein modification process	K13412//calcium-dependent protein kinase [EC:2.7.11.1]	gi|460407122|ref|XP_004249005.1|//PREDICTED: calcium-dependent protein kinase 4 [Solanum lycopersicum]
Solyc09g066360.1.1	582	3.64244586582308	88.1002465077595	4.59616661969556	5.49180682891073e-09	Up	4.36020148560454e-10	NA	NA	NA	K14516//ethylene-responsive transcription factor 1	gi|460403749|ref|XP_004247350.1|//PREDICTED: ethylene-responsive transcription factor 1B [Solanum lycopersicum]
Solyc06g082970.3.1	774	2875.38273435391	721.520493133087	-1.99464172518954	1.31070255058856e-15	Down	3.93288934405768e-17	NA	NA	NA	NA	gi|460393698|ref|XP_004242446.1|//PREDICTED: uncharacterized protein LOC101259949 [Solanum lycopersicum]
Solyc01g104320.3.1	1855	668.88862655466	261.947866209382	-1.35248630455037	0.000681560374523104	Down	0.000145137707605878	NA	NA	NA	K02952//small subunit ribosomal protein S13	gi|723664078|ref|XP_010314867.1|//PREDICTED: probable plastid-lipid-associated protein 4, chloroplastic isoform X4 [Solanum lycopersicum];gi|590683169|ref|XP_007041529.1|//Plastid-lipid associated protein PAP / fibrillin family protein [Theobroma cacao];gi|723664073|ref|XP_010314863.1|//PREDICTED: probable plastid-lipid-associated protein 4, chloroplastic isoform X2 [Solanum lycopersicum];gi|723664070|ref|XP_010314860.1|//PREDICTED: probable plastid-lipid-associated protein 4, chloroplastic isoform X1 [Solanum lycopersicum];gi|460369318|ref|XP_004230510.1|//PREDICTED: probable plastid-lipid-associated protein 4, chloroplastic isoform X3 [Solanum lycopersicum]
Solyc01g096470.3.1	1683	856.852060500514	311.936105606672	-1.45779558810521	0.000768518168110226	Down	0.000166090216889186	NA	NA	NA	K09903//uridylate kinase [EC:2.7.4.22]	gi|460368350|ref|XP_004230030.1|//PREDICTED: trihelix transcription factor ASIL2 [Solanum lycopersicum]
Solyc04g063320.1.1	1566	73.0311701885561	8.21531481381924	-3.15212458132002	3.12138744511395e-05	Down	4.91570819874998e-06	NA	NA	NA	K00166//2-oxoisovalerate dehydrogenase E1 component alpha subunit [EC:1.2.4.4]	gi|723693453|ref|XP_010320010.1|//PREDICTED: 2-oxoisovalerate dehydrogenase subunit alpha 1, mitochondrial isoform X2 [Solanum lycopersicum]
Solyc03g120240.3.1	6104	396.693963609407	907.260528928313	1.1934904500191	0.00633947981748796	Up	0.00174996587115692	GO:0016021//integral component of membrane;GO:0000139//Golgi membrane	NA	NA	K17471//sulfate transporter 3;K20318//protein SYS1	gi|697179187|ref|XP_009598570.1|//PREDICTED: protein SYS1 homolog isoform X1 [Nicotiana tomentosiformis];gi|593267046|ref|XP_007135701.1|//hypothetical protein PHAVU_010G151000g [Phaseolus vulgaris]
Solyc05g008220.3.1	573	11.1487325170286	937.244630535997	6.39347404864559	4.04332439725194e-24	Up	4.97352412066922e-26	NA	NA	NA	NA	gi|460386324|ref|XP_004238848.1|//PREDICTED: uncharacterized protein At1g66480-like [Solanum lycopersicum]
Solyc01g096730.2.1	1781	445.967486166703	1933.2376324445	2.11600854612938	5.79734805939878e-08	Up	5.41745623412582e-09	NA	NA	NA	K17866//diphthamide biosynthesis protein 2;K12818//ATP-dependent RNA helicase DHX8/PRP22 [EC:3.6.4.13]	gi|723661784|ref|XP_004230051.2|//PREDICTED: protein ZINC INDUCED FACILITATOR-LIKE 1 [Solanum lycopersicum]
Solyc10g082030.2.1	1207	39117.779782283	8498.70613400023	-2.20250936591969	9.22742910436331e-15	Down	3.06801355341139e-16	NA	GO:0016209//antioxidant activity;GO:0016705//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen;GO:0004601//peroxidase activity;GO:0051920//peroxiredoxin activity	GO:0019725//cellular homeostasis;GO:0098869//cellular oxidant detoxification;GO:0055114//oxidation-reduction process	K03386//peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15]	gi|460407951|ref|XP_004249412.1|//PREDICTED: 2-Cys peroxiredoxin BAS1, chloroplastic [Solanum lycopersicum]
Solyc02g038660.2.1	1817	4.93201762767989	0.409815094385571	-3.5891329280801	0.0364712106611059	Down	0.0129075886063124	NA	NA	NA	NA	gi|970008223|ref|XP_015064991.1|//PREDICTED: tetratricopeptide repeat protein 5-like [Solanum pennellii]
Solyc06g060260.3.1	1900	2663.63539100862	1276.08405793174	-1.06167324896979	0.00228003175154772	Down	0.000552075676832189	GO:0009536//plastid	GO:0004601//peroxidase activity;GO:0005506//iron ion binding	GO:0008152//metabolic process;GO:0006950//response to stress	K00434//L-ascorbate peroxidase [EC:1.11.1.11]	gi|807201017|ref|NP_001293099.1|//stromal ascorbate peroxidase 7 [Solanum lycopersicum]
Solyc02g084167.1.1	4087	29.5333214517811	161.242624977697	2.44881765233952	7.28282908479931e-05	Up	1.23271682101065e-05	NA	NA	NA	K08739//DNA mismatch repair protein MLH3	gi|723672638|ref|XP_010316420.1|//PREDICTED: uncharacterized protein LOC104645760 [Solanum lycopersicum];gi|971539165|ref|XP_015160674.1|//PREDICTED: DNA mismatch repair protein MLH3 isoform X9 [Solanum tuberosum]
Solyc07g063100.3.1	2775	5365.42964684238	13718.5671658202	1.354364200029	8.50159994938529e-05	Up	1.4622815763671e-05	NA	NA	NA	K06638//mitotic spindle assembly checkpoint protein MAD1;K10406//kinesin family member C2/C3	gi|460397356|ref|XP_004244233.1|//PREDICTED: proton pump-interactor 1 [Solanum lycopersicum]
Solyc05g055940.3.1	3013	3129.27771110591	863.355766641612	-1.85780261332695	7.98641603365492e-07	Down	9.14028104632432e-08	GO:0005634//nucleus	GO:0003677//DNA binding	GO:0006355//regulation of transcription, DNA-templated	K12741//heterogeneous nuclear ribonucleoprotein A1/A3;K06236//collagen, type I, alpha;K14491//two-component response regulator ARR-B family;K01940//argininosuccinate synthase [EC:6.3.4.5];K14317//nuclear pore complex protein Nup214	gi|970029551|ref|XP_015076100.1|//PREDICTED: protein PHR1-LIKE 1-like [Solanum pennellii]
Solyc07g017660.2.1	4498	518.692368849538	235.577484031442	-1.13867748832031	1.38630617372812e-06	Down	1.67268267644175e-07	NA	NA	NA	K18328//lariat debranching enzyme [EC:3.1.-.-]	gi|460394629|ref|XP_004242903.1|//PREDICTED: lariat debranching enzyme isoform X1 [Solanum lycopersicum];gi|723713400|ref|XP_010323390.1|//PREDICTED: lariat debranching enzyme isoform X2 [Solanum lycopersicum]
Solyc09g014900.3.1	1733	302.906762784633	2093.91775923143	2.78925908641808	3.31386067074887e-05	Up	5.2620569768116e-06	NA	GO:0005506//iron ion binding;GO:0004497//monooxygenase activity	NA	K20617	gi|902763227|ref|NP_001234847.2|//cytochrome P450 71 family protein [Solanum lycopersicum]
Solyc06g071725.1.1	3025	85.6636689282177	18.6405901852215	-2.20023593008559	0.00609215078217519	Down	0.00167306893862213	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K14497//protein phosphatase 2C [EC:3.1.3.16];K03553//recombination protein RecA	gi|970035017|ref|XP_015078838.1|//PREDICTED: U-box domain-containing protein 35-like [Solanum pennellii]
Solyc02g081170.3.1	1284	13331.7903744802	2805.43470581994	-2.24857429741309	4.60374879297559e-05	Down	7.4629877369356e-06	GO:0009534//chloroplast thylakoid	GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	GO:0008152//metabolic process;GO:0050896//response to stimulus	K17893//ubiquinol oxidase [EC:1.10.3.11]	gi|350539549|ref|NP_001234183.1|//plastid lipid associated protein CHRC [Solanum lycopersicum]
Solyc07g007180.3.1	1054	268.564566623949	126.882275422607	-1.08177842496269	0.0492556302800241	Down	0.0183799804209528	NA	NA	NA	K11982//E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]	gi|460394232|ref|XP_004242708.1|//PREDICTED: RING-box protein 2-like [Solanum lycopersicum]
Solyc11g066510.2.1	985	415.850919740342	20.7998378194902	-4.32142223830051	1.41096759865976e-22	Down	2.03009353318424e-24	NA	NA	NA	K10664//E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:2.3.2.27]	gi|460411176|ref|XP_004250990.1|//PREDICTED: RING-H2 finger protein ATL57 [Solanum lycopersicum]
Solyc03g096950.3.1	2409	1493.71732935807	652.370500578388	-1.19514370708216	0.000404514553853709	Down	8.14624490309544e-05	GO:0016020//membrane;GO:0005887//integral component of plasma membrane	GO:0005355//glucose transmembrane transporter activity;GO:0005351//sugar:proton symporter activity;GO:0005215//transporter activity	GO:0006810//transport;GO:0046323//glucose import;GO:0015992//proton transport;GO:1904659//glucose transmembrane transport	K08145//MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8;K08150//MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13	gi|667667697|ref|NP_001288106.1|//D-xylose-proton symporter-like 2-like [Solanum lycopersicum]
Solyc12g007090.2.1	1608	2516.08122046966	259.489537649479	-3.27743021705678	1.92249871791386e-10	Down	1.21463967752497e-11	NA	NA	NA	NA	gi|460412433|ref|XP_004251605.1|//PREDICTED: uncharacterized protein LOC101249241 [Solanum lycopersicum]
Solyc11g011180.2.1	3314	63.9088163573697	825.692785778546	3.69151822732716	6.72989005717238e-09	Up	5.41341238384449e-10	NA	NA	NA	K13466//EIX receptor 1/2;K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|460410225|ref|XP_004250531.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 isoform X1 [Solanum lycopersicum]
Solyc10g050880.1.1	939	7.16354962597105	269.138868400525	5.23153230881134	2.01426411053048e-08	Up	1.73361258059299e-09	NA	NA	NA	K17872//NADH:ubiquinone reductase (non-electrogenic) [EC:1.6.5.9];K13258//2-hydroxyisoflavanone dehydratase [EC:4.2.1.105];K20506//tuliposide A-converting enzyme [EC:4.2.99.22]	gi|460406573|ref|XP_004248737.1|//PREDICTED: 2-hydroxyisoflavanone dehydratase-like [Solanum lycopersicum]
Solyc03g122190.3.1	2714	5980.51575279455	28771.7699842048	2.26631216438328	2.58452944670778e-06	Up	3.28509222203426e-07	NA	NA	NA	K13464//jasmonate ZIM domain-containing protein	gi|350535969|ref|NP_001234223.1|//salt responsive protein 1 [Solanum lycopersicum]
Solyc10g055820.2.1	2019	27.5966556841685	338.438441776066	3.61632809840828	1.46388766878411e-05	Up	2.15479812286732e-06	GO:0043231//intracellular membrane-bounded organelle;GO:0030312//external encapsulating structure	GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0030247//polysaccharide binding	GO:0033554//cellular response to stress;GO:0006026//aminoglycan catabolic process	K20547;K01183//chitinase [EC:3.2.1.14]	gi|460406364|ref|XP_004248635.1|//PREDICTED: endochitinase 3-like [Solanum lycopersicum]
Solyc04g071160.3.1	1436	729.113461364334	2086.06140803023	1.51656638467782	1.64621301178391e-05	Up	2.44833379939534e-06	NA	GO:0005488//binding	NA	K20557	gi|460384151|ref|XP_004237777.1|//PREDICTED: transcription factor VIP1-like [Solanum lycopersicum]
Solyc08g016670.3.1	1285	984.027842934572	441.639632359118	-1.15582949287058	0.0003783839604716	Down	7.55978093084754e-05	NA	NA	NA	K04507//calcyclin binding protein	gi|460398521|ref|XP_004244806.1|//PREDICTED: calcyclin-binding protein-like [Solanum lycopersicum]
Solyc06g083050.3.1	1776	37.3110598196212	6.10503252746443	-2.61153245345962	0.00122189570939085	Down	0.000276461419263547	NA	NA	NA	K16296//serine carboxypeptidase-like clade I [EC:3.4.16.-]	gi|460393680|ref|XP_004242437.1|//PREDICTED: serine carboxypeptidase-like 20 [Solanum lycopersicum]
Solyc10g076780.1.1	1248	45.0560640925793	284.097258316395	2.65659171240469	0.000395153680343534	Up	7.93606690655643e-05	NA	NA	NA	K01988//lactosylceramide 4-alpha-galactosyltransferase [EC:2.4.1.228]	gi|460407277|ref|XP_004249080.1|//PREDICTED: lactosylceramide 4-alpha-galactosyltransferase-like [Solanum lycopersicum]
Solyc10g083670.2.1	1855	486.323684930137	27.4556612946988	-4.14674128996171	8.17521571636503e-10	Down	5.72582016216262e-11	NA	NA	NA	K13680//beta-mannan synthase [EC:2.4.1.32]	gi|460408050|ref|XP_004249461.1|//PREDICTED: glucomannan 4-beta-mannosyltransferase 9 [Solanum lycopersicum];gi|698568470|ref|XP_009774056.1|//PREDICTED: glucomannan 4-beta-mannosyltransferase 9-like [Nicotiana sylvestris]
Solyc11g073020.2.1	1120	756.994979976128	304.923845090398	-1.31183475926074	0.00561788677345744	Down	0.00152508831709746	NA	NA	NA	K14292//trimethylguanosine synthase [EC:2.1.1.-];K07213//copper chaperone	gi|460411825|ref|XP_004251305.1|//PREDICTED: uncharacterized protein LOC101261297 [Solanum lycopersicum]
Solyc11g065980.2.1	1269	464.488138145322	216.083540898762	-1.10405256810696	0.00833753458556492	Down	0.00237775745915302	NA	GO:0016876//ligase activity, forming aminoacyl-tRNA and related compounds;GO:0032559//adenyl ribonucleotide binding	GO:0010467//gene expression	K14561//U3 small nucleolar ribonucleoprotein protein IMP4	gi|723744987|ref|XP_010313282.1|//PREDICTED: U3 small nucleolar ribonucleoprotein protein IMP4-like isoform X1 [Solanum lycopersicum]
Solyc02g090020.3.1	2085	1626.4750369363	333.595410623049	-2.28557733370969	0.000145949285499226	Down	2.6558983592039e-05	GO:0009535//chloroplast thylakoid membrane;GO:0019898//extrinsic component of membrane;GO:0016021//integral component of membrane;GO:0009654//photosystem II oxygen evolving complex	GO:0005509//calcium ion binding	GO:0042549//photosystem II stabilization	K02716//photosystem II oxygen-evolving enhancer protein 1;K00815//tyrosine aminotransferase [EC:2.6.1.5]	gi|723668705|ref|XP_010315882.1|//PREDICTED: stress regulated protein isoform X1 [Solanum lycopersicum];gi|930425293|ref|NP_001233778.2|//stress regulated protein [Solanum lycopersicum];gi|460372520|ref|XP_004232077.1|//PREDICTED: oxygen-evolving enhancer protein 1, chloroplastic [Solanum lycopersicum]
Solyc01g111040.3.1	1230	483.981545654663	150.799926764251	-1.68231631023802	5.29209886779363e-06	Down	7.1210962102039e-07	NA	GO:0046872//metal ion binding	NA	K17338//receptor expression-enhancing protein 1/2/3/4	gi|460370164|ref|XP_004230924.1|//PREDICTED: uncharacterized protein LOC101257023 [Solanum lycopersicum]
Solyc11g012745.1.1	2936	85.2177606266519	210.145382651746	1.30216171207942	0.00737898355095931	Up	0.00207853655489039	NA	NA	NA	K15559//regulator of Ty1 transposition protein 103	gi|970063415|ref|XP_015058637.1|//PREDICTED: regulation of nuclear pre-mRNA domain-containing protein 1B-like [Solanum pennellii];gi|460409744|ref|XP_004250298.1|//PREDICTED: thioredoxin domain-containing protein 9 homolog [Solanum lycopersicum]
Solyc08g067990.2.1	2329	8.78035185426421	1.41402499309099	-2.63447113369916	0.0479845840817122	Down	0.0178269848495015	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K09490//heat shock 70kDa protein 5;K13199//plasminogen activator inhibitor 1 RNA-binding protein;K01183//chitinase [EC:3.2.1.14]	gi|460399779|ref|XP_004245414.1|//PREDICTED: subtilisin-like protease [Solanum lycopersicum]
Solyc03g118820.3.1	1196	10.6109861382068	46.6192341071738	2.13536656288425	0.0185524388382903	Up	0.00589808225927308	NA	GO:0032561//guanyl ribonucleotide binding	GO:0006810//transport;GO:0035556//intracellular signal transduction	K07976//Rab family, other;K07904//Ras-related protein Rab-11A	gi|723685851|ref|XP_010318643.1|//PREDICTED: ras-related protein RABA6a-like [Solanum lycopersicum]
Solyc05g007610.2.1	5695	1.48727749668856	57.422044387829	5.27085893940126	1.31422718630022e-05	Up	1.91000887109907e-06	NA	NA	NA	K13453;K13457//disease resistance protein RPM1	gi|723697447|ref|XP_004239388.2|//PREDICTED: putative late blight resistance protein homolog R1B-23 isoform X1 [Solanum lycopersicum]
Solyc04g010290.3.1	1305	573.964814347434	101.990861697122	-2.49252240474049	1.00857167635868e-06	Down	1.18646645690622e-07	NA	NA	NA	K20891	gi|460382071|ref|XP_004236763.1|//PREDICTED: xylosyltransferase sqv-6 [Solanum lycopersicum]
Solyc12g088310.2.1	3063	548.077554583317	100.559724258947	-2.44632745429885	2.59579315439926e-06	Down	3.30327934587709e-07	NA	NA	NA	K17046//protein DEK;K14306//nuclear pore complex protein Nup62	gi|723752287|ref|XP_010314603.1|//PREDICTED: uncharacterized protein LOC101254285 [Solanum lycopersicum]
Solyc06g053360.3.1	1498	49.1754569773062	101.560035744212	1.04632244351285	0.015060346365225	Up	0.00464980054208881	NA	NA	NA	NA	gi|460390753|ref|XP_004240989.1|//PREDICTED: protein ENHANCED DISEASE RESISTANCE 2-like [Solanum lycopersicum]
Solyc06g053230.3.1	1654	440.935800320617	1175.77975043489	1.41497731511445	0.000164229379980627	Up	3.03139961854803e-05	NA	NA	NA	K07441//beta-1,4-N-acetylglucosaminyltransferase [EC:2.4.1.141]	gi|460390724|ref|XP_004240975.1|//PREDICTED: uncharacterized protein LOC101264014 [Solanum lycopersicum]
Solyc10g085555.1.1	1876	2987.15980942463	382.01707348471	-2.96706539897963	2.59179664438225e-12	Down	1.22305596831218e-13	GO:0016020//membrane;GO:0043234//protein complex;GO:0005576//extracellular region;GO:0000015//phosphopyruvate hydratase complex;GO:0009536//plastid;GO:0031967//organelle envelope	GO:0000287//magnesium ion binding;GO:0016836//hydro-lyase activity;GO:0004634//phosphopyruvate hydratase activity;GO:0046914//transition metal ion binding;GO:0003676//nucleic acid binding	GO:0006007//glucose catabolic process;GO:0009314//response to radiation;GO:0006970//response to osmotic stress;GO:0009725//response to hormone;GO:0006096//glycolytic process;GO:0010038//response to metal ion	K01689//enolase [EC:4.2.1.11]	gi|460408278|ref|XP_004249573.1|//PREDICTED: enolase-like [Solanum lycopersicum]
Solyc01g111145.1.1	1658	27576.6376476356	2120.73282993236	-3.70081177666874	4.22705025033315e-17	Down	1.07299135995112e-18	NA	NA	NA	K02184//formin 2	gi|723666256|ref|XP_010315362.1|//PREDICTED: proline-rich protein 4-like isoform X2 [Solanum lycopersicum]
Solyc08g083035.1.1	717	60.4396932844167	1.0837180512329	-5.80143497169605	9.50732024989222e-05	Down	1.65195171684852e-05	NA	NA	NA	NA	gi|460399884|ref|XP_004245466.1|//PREDICTED: uncharacterized protein LOC101266851 [Solanum lycopersicum]
Solyc01g091710.3.1	3361	531.307971924491	103.517074371287	-2.35967961049204	1.14371532994089e-06	Down	1.3616470716532e-07	NA	NA	NA	K18342//OTU domain-containing protein 6 [EC:3.4.19.12]	gi|460367966|ref|XP_004229841.1|//PREDICTED: F-box protein At4g00755-like [Solanum lycopersicum]
Solyc02g094030.3.1	961	812.000045181257	9016.65458824184	3.47304054283358	4.87117105370274e-13	Up	2.06082419336239e-14	NA	NA	NA	NA	gi|460371932|ref|XP_004231788.1|//PREDICTED: uncharacterized protein At3g27210-like [Solanum lycopersicum]
Solyc04g077620.1.1	375	167.695150728746	985.443626111182	2.55493237110749	1.40544249372565e-05	Up	2.05619568654882e-06	NA	NA	NA	NA	gi|723696593|ref|XP_010320524.1|//PREDICTED: uncharacterized protein LOC104647238 [Solanum lycopersicum]
Solyc03g112960.1.1	828	81.1524777087362	279.150072707496	1.78233388364789	0.0005933370957177	Up	0.000124846723770927	NA	NA	NA	K01051//pectinesterase [EC:3.1.1.11]	gi|460380935|ref|XP_004236208.1|//PREDICTED: pectinesterase 1-like [Solanum lycopersicum]
Solyc06g065570.3.1	2019	997.391654512574	3562.54687668562	1.8366769608657	5.21866456957388e-12	Up	2.58521142573568e-13	NA	GO:0016407//acetyltransferase activity	NA	K20793	gi|723709613|ref|XP_010322748.1|//PREDICTED: N-alpha-acetyltransferase 50 [Solanum lycopersicum]
BGI_novel_G000133	1899	125.919683942905	0.516809603723957	-7.92865523000795	2.67857688495904e-11	Down	1.48366082117531e-12	NA	NA	NA	K07305//peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12];K03549//KUP system potassium uptake protein;K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|971549825|ref|XP_015164077.1|//PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Solanum tuberosum]
Solyc10g081300.1.1	1029	29.3336309554662	127.857412242244	2.12390823401017	8.07404680939727e-06	Up	1.13189540965197e-06	NA	NA	NA	K12603//CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4];K14848//ribosome assembly protein RRB1	gi|460407835|ref|XP_004249355.1|//PREDICTED: metacaspase-9 [Solanum lycopersicum]
Solyc09g008240.3.1	3148	1955.04406470786	545.984480008359	-1.84026927755765	4.28250947887522e-05	Down	6.90871515751154e-06	GO:0031224//intrinsic component of membrane;GO:0016021//integral component of membrane	GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0019829//cation-transporting ATPase activity;GO:0042626//ATPase activity, coupled to transmembrane movement of substances	GO:0006810//transport;GO:0055085//transmembrane transport;GO:0009207//purine ribonucleoside triphosphate catabolic process	K05658//ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:3.6.3.44]	gi|460402245|ref|XP_004246624.1|//PREDICTED: ABC transporter B family member 1 [Solanum lycopersicum]
Solyc04g007510.3.1	4545	169.804682500328	77.5182408954138	-1.13126850544029	0.0295880218397677	Down	0.0101299381466478	NA	NA	NA	K14442//ATP-dependent RNA helicase DHX36 [EC:3.6.4.13]	gi|971573884|ref|XP_006360431.2|//PREDICTED: ATP-dependent RNA helicase DHX36-like isoform X1 [Solanum tuberosum];gi|723690331|ref|XP_004237199.2|//PREDICTED: ATP-dependent RNA helicase DHX36 isoform X2 [Solanum lycopersicum]
Solyc03g044630.2.1	976	135.986806217272	15.7954687800672	-3.10588402502384	4.99061620277409e-06	Down	6.68379454919014e-07	NA	NA	NA	NA	gi|723680833|ref|XP_004234729.2|//PREDICTED: uncharacterized protein LOC101249245 [Solanum lycopersicum]
Solyc03g119860.3.1	5130	1435.75124050093	57.4642175516467	-4.64299811550945	1.96094080234446e-20	Down	3.42806484381822e-22	NA	GO:0016853//isomerase activity	NA	K03768//peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]	gi|460379969|ref|XP_004235731.1|//PREDICTED: peptidyl-prolyl cis-trans isomerase CYP26-2, chloroplastic [Solanum lycopersicum]
Solyc01g066940.3.1	1245	182.39094052555	2321.40734206759	3.66989372071732	1.4417768609116e-32	Up	8.3836734121891e-35	GO:0031224//intrinsic component of membrane	NA	GO:0006810//transport	K08511//vesicle-associated membrane protein 72	gi|460366734|ref|XP_004229234.1|//PREDICTED: vesicle-associated membrane protein 724 [Solanum lycopersicum]
Solyc02g071410.3.1	1522	8.2686196572399	78.1962807660499	3.24138157585617	8.04592474952717e-08	Up	7.73162144188201e-09	NA	NA	NA	K04124//gibberellin 3-beta-dioxygenase [EC:1.14.11.15];K05278//flavonol synthase [EC:1.14.11.23];K06892//feruloyl-CoA ortho-hydroxylase [EC:1.14.11.-]	gi|723678305|ref|XP_004233861.2|//PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101257141 [Solanum lycopersicum]
Solyc03g078780.2.1	3979	736.841559565413	144.849052869011	-2.34680418383128	1.55801715681024e-18	Down	3.35088675816128e-20	NA	NA	NA	K00699//glucuronosyltransferase [EC:2.4.1.17]	gi|460378594|ref|XP_004235055.1|//PREDICTED: 7-deoxyloganetic acid glucosyltransferase-like [Solanum lycopersicum]
Solyc03g113380.3.1	3645	669.663411492904	2315.1901361987	1.78962262987851	7.25963440509964e-07	Up	8.22814475222364e-08	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial;K15710//E3 ubiquitin-protein ligase SHPRH [EC:3.6.4.- 2.3.2.27]	gi|460380881|ref|XP_004236182.1|//PREDICTED: pentatricopeptide repeat-containing protein At1g74750-like [Solanum lycopersicum]
Solyc04g076780.3.1	2824	354.934697546194	2729.32991006889	2.94292127140266	4.35420168592263e-06	Up	5.73083575107829e-07	NA	NA	GO:0006810//transport	NA	gi|460384660|ref|XP_004238028.1|//PREDICTED: oligopeptide transporter 4-like [Solanum lycopersicum]
Solyc01g066457.1.1	1276	68.1805441951352	509.457732776683	2.90153043822148	2.760864135213e-10	Up	1.78239774943675e-11	NA	NA	NA	K01259//proline iminopeptidase [EC:3.4.11.5];K08726//soluble epoxide hydrolase / lipid-phosphate phosphatase [EC:3.3.2.10 3.1.3.76];K10144//RING finger and CHY zinc finger domain-containing protein 1 [EC:2.3.2.27]	gi|723658279|ref|XP_004229258.2|//PREDICTED: bifunctional epoxide hydrolase 2-like [Solanum lycopersicum]
Solyc04g005300.3.1	804	38.2186680465014	77.3997498834536	1.01805140429535	0.0275317412551903	Up	0.00933152390164923	NA	NA	NA	K09716//D-aminoacyl-tRNA deacylase [EC:3.1.1.96]	gi|460383007|ref|XP_004237227.1|//PREDICTED: D-aminoacyl-tRNA deacylase [Solanum lycopersicum]
Solyc01g008930.4.1	1432	1146.16283292555	78.5911567074879	-3.86630122344479	9.33656642101592e-10	Down	6.59141822029378e-11	NA	GO:0016636//oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor;GO:0046914//transition metal ion binding;GO:0050619//phytochromobilin:ferredoxin oxidoreductase activity;GO:0050897//cobalt ion binding	GO:0010024//phytochromobilin biosynthetic process;GO:0033014//tetrapyrrole biosynthetic process;GO:0055114//oxidation-reduction process	K08101//phytochromobilin:ferredoxin oxidoreductase [EC:1.3.7.4]	gi|924859404|ref|NP_001234133.2|//phytochromobilin synthase [Solanum lycopersicum];gi|723654214|ref|XP_010313054.1|//PREDICTED: phytochromobilin synthase isoform X1 [Solanum lycopersicum]
Solyc02g086530.3.1	3401	74.2116280324681	378.850022953894	2.3519096733909	3.7241029268218e-05	Up	5.95373395450228e-06	NA	GO:0008378//galactosyltransferase activity	NA	K06617//raffinose synthase [EC:2.4.1.82]	gi|460373017|ref|XP_004232319.1|//PREDICTED: galactinol--sucrose galactosyltransferase-like [Solanum lycopersicum]
Solyc02g072300.3.1	2027	2815.72448757342	9038.61779593196	1.68259599325208	1.12016128309773e-07	Up	1.10103820766688e-08	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process	K14502//protein brassinosteroid insensitive 2 [EC:2.7.11.1]	gi|698458703|ref|XP_009781118.1|//PREDICTED: shaggy-related protein kinase eta [Nicotiana sylvestris];gi|460374497|ref|XP_004233047.1|//PREDICTED: shaggy-related protein kinase eta [Solanum lycopersicum]
Solyc03g117850.3.1	3569	2084.06836115067	4378.51973585783	1.07104061306142	0.000762710127113438	Up	0.000164749708760339	NA	GO:0032559//adenyl ribonucleotide binding	NA	K11975//E3 ubiquitin-protein ligase RNF144 [EC:2.3.2.27]	gi|460380255|ref|XP_004235873.1|//PREDICTED: ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic [Solanum lycopersicum]
Solyc03g079850.3.1	1570	311.479617419862	636.34647044747	1.03067472170121	0.0137114750588902	Up	0.00417661302300771	NA	NA	NA	NA	gi|970018445|ref|XP_015070392.1|//PREDICTED: protein GUCD1 isoform X1 [Solanum pennellii];gi|350538261|ref|NP_001234334.1|//guanylyl cyclase [Solanum lycopersicum]
Solyc02g093680.3.1	887	1875.53422873883	4577.14126585097	1.28714522640008	0.0344747862056958	Up	0.0120882768918855	NA	GO:0000104//succinate dehydrogenase activity;GO:0051540//metal cluster binding	GO:0009060//aerobic respiration	K00235//succinate dehydrogenase (ubiquinone) iron-sulfur subunit [EC:1.3.5.1]	gi|350539996|ref|NP_001234860.1|//mitochondrial succinate dehydrogenase iron sulfur subunit [Solanum lycopersicum]
BGI_novel_G000335	2697	42.9657661038574	858.627764878267	4.32077330062014	1.61229981222251e-10	Up	1.00543372068297e-11	NA	NA	NA	NA	gi|565353569|ref|XP_006343702.1|//PREDICTED: uncharacterized protein LOC102605937 [Solanum tuberosum]
Solyc09g074320.3.1	4813	1146.91271934472	4603.60142764096	2.00500732698873	2.97105275666126e-09	Up	2.25807983108406e-10	NA	GO:0046872//metal ion binding;GO:0004721//phosphoprotein phosphatase activity;GO:0046914//transition metal ion binding;GO:0016791//phosphatase activity	GO:0006470//protein dephosphorylation;GO:0009742//brassinosteroid mediated signaling pathway	K01090//protein phosphatase [EC:3.1.3.16]	gi|525314370|ref|NP_001266004.1|//Hop-interacting protein THI129 [Solanum lycopersicum]
Solyc01g110682.1.1	2278	503.308163852774	214.24119196321	-1.23220610664646	0.00302507746527019	Down	0.000759426596413998	NA	NA	GO:0009733//response to auxin	K08739//DNA mismatch repair protein MLH3;K14488//SAUR family protein	gi|375161458|gb|AFA41496.1|//DNA mismatch repair protein MLH3-like protein [Solanum tuberosum];gi|969999501|ref|XP_015083384.1|//PREDICTED: auxin-responsive protein SAUR21-like [Solanum pennellii];gi|723666146|ref|XP_010315346.1|//PREDICTED: auxin-induced protein 15A-like [Solanum lycopersicum];gi|971539159|ref|XP_015160667.1|//PREDICTED: DNA mismatch repair protein MLH3 isoform X7 [Solanum tuberosum]
Solyc01g109630.3.1	2062	572.971079406445	60.1281720349326	-3.2523493163569	2.60646144303954e-06	Down	3.31847994523703e-07	NA	NA	NA	K15032//mTERF domain-containing protein, mitochondrial	gi|460370116|ref|XP_004230900.1|//PREDICTED: uncharacterized protein LOC101250346 [Solanum lycopersicum]
Solyc12g006060.2.1	1491	214.510242678148	67.3300629186521	-1.67172381869428	0.000200078797987939	Down	3.76396933593681e-05	NA	NA	NA	K13457//disease resistance protein RPM1	gi|723749359|ref|XP_004251536.2|//PREDICTED: uncharacterized protein LOC101254273 [Solanum lycopersicum]
Solyc02g081910.2.1	4140	1112.82211390693	297.70964512593	-1.90224512685662	3.17528865213904e-07	Down	3.37765444248868e-08	NA	NA	NA	K03168//DNA topoisomerase I [EC:5.99.1.2]	gi|723673486|ref|XP_010316521.1|//PREDICTED: uncharacterized protein LOC101248941 isoform X1 [Solanum lycopersicum];gi|460375950|ref|XP_004233765.1|//PREDICTED: uncharacterized protein LOC101248941 isoform X2 [Solanum lycopersicum]
Solyc10g078580.1.1	183	1384.60153675968	18.0027759727584	-6.26510766142819	5.6484814607976e-37	Down	2.29438344626433e-39	NA	NA	NA	NA	gi|970056954|ref|XP_015055121.1|//PREDICTED: arabinogalactan peptide 14-like [Solanum pennellii]
Solyc05g016370.2.1	2006	7.30312214469963	62.6700572597108	3.10119104631504	1.31703288048075e-06	Up	1.58271731275903e-07	NA	NA	NA	K01897//long-chain acyl-CoA synthetase [EC:6.2.1.3]	gi|698478451|ref|XP_009786376.1|//PREDICTED: long chain acyl-CoA synthetase 4-like [Nicotiana sylvestris]
Solyc08g060970.3.1	2254	419.41153966599	3041.63286705311	2.8584075652264	4.864986036871e-18	Up	1.10254641062232e-19	NA	NA	NA	K01184//polygalacturonase [EC:3.2.1.15];K01213//galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]	gi|802084009|ref|NP_001234200.2|//polygalacturonase precursor [Solanum lycopersicum]
Solyc10g079150.2.1	4143	17.3781029960221	53.1552196721997	1.61294076143614	0.00369535741851469	Up	0.000953729490301018	NA	NA	NA	K08064//nuclear transcription factor Y, alpha;K00942//guanylate kinase [EC:2.7.4.8]	gi|723738178|ref|XP_010312081.1|//PREDICTED: nuclear transcription factor Y subunit A-7-like isoform X2 [Solanum lycopersicum]
Solyc04g008230.3.1	1569	59.7841078108558	5.89112815538443	-3.34314618629011	2.4226032275695e-06	Down	3.06211702127933e-07	NA	NA	NA	K01213//galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]	gi|460382382|ref|XP_004236918.1|//PREDICTED: polygalacturonase At1g48100 [Solanum lycopersicum]
Solyc05g051500.3.1	1695	204.355645734375	418.391312985035	1.03377079611819	0.0478179579544659	Up	0.0177597336013977	NA	NA	NA	NA	gi|723702299|ref|XP_004240249.2|//PREDICTED: WEB family protein At5g16730, chloroplastic-like [Solanum lycopersicum]
Solyc04g079090.3.1	2818	261.248599332799	657.724715379569	1.33206058126999	0.000535341231356793	Up	0.000111067142304007	NA	NA	NA	K15728//phosphatidate phosphatase LPIN [EC:3.1.3.4]	gi|723696636|ref|XP_010320534.1|//PREDICTED: uncharacterized protein LOC101261812 [Solanum lycopersicum]
Solyc01g005030.3.1	2466	587.732686941715	173.988139872481	-1.75617117026035	8.29113065024974e-07	Down	9.53721081954328e-08	NA	NA	NA	K17087//transmembrane 9 superfamily member 3;K16279//E3 ubiquitin-protein ligase KEG [EC:2.7.11.1 2.3.2.27];K17085//transmembrane 9 superfamily member 1	gi|723656175|ref|XP_010316568.1|//PREDICTED: E3 ubiquitin-protein ligase KEG isoform X1 [Solanum lycopersicum]
Solyc12g019410.2.1	2416	99.1215827864998	1809.7704011427	4.19046364451728	7.16549023780312e-32	Up	4.46040282433697e-34	NA	NA	NA	K06272//integrin-linked kinase [EC:2.7.11.1]	gi|460413227|ref|XP_004251996.1|//PREDICTED: serine/threonine-protein kinase CTR1-like isoform X1 [Solanum lycopersicum];gi|723749128|ref|XP_010314002.1|//PREDICTED: serine/threonine-protein kinase CTR1-like isoform X2 [Solanum lycopersicum]
Solyc03g119250.3.1	1932	743.70359565954	6059.09468174376	3.02630259742857	3.69426025864711e-05	Up	5.90051632932118e-06	NA	NA	NA	NA	gi|460380080|ref|XP_004235786.1|//PREDICTED: uncharacterized protein LOC101248759 [Solanum lycopersicum]
Solyc01g107740.3.1	3319	241.078315267954	1759.80785840729	2.86784412624525	1.52998561174241e-17	Up	3.71831899081575e-19	NA	NA	NA	K13412//calcium-dependent protein kinase [EC:2.7.11.1]	gi|460369806|ref|XP_004230748.1|//PREDICTED: proline-rich protein 3 [Solanum lycopersicum]
Solyc01g110150.2.1	917	359.695050159227	1383.64058559197	1.94362302576249	2.98758857800974e-06	Up	3.84306254014895e-07	NA	NA	NA	NA	gi|460370256|ref|XP_004230970.1|//PREDICTED: nucleolin [Solanum lycopersicum]
Solyc09g008660.3.1	1752	136.467792890501	539.139966079113	1.98209935175837	2.83129886257132e-07	Up	2.9864625838373e-08	NA	NA	NA	K10395//kinesin family member 4/21/27;K10406//kinesin family member C2/C3	gi|460402813|ref|XP_004246905.1|//PREDICTED: protein CHUP1, chloroplastic [Solanum lycopersicum]
Solyc06g008760.1.1	306	1029.24164306907	2121.8337603164	1.04372989485806	0.00893373569392805	Up	0.00257176236634137	NA	GO:0015036//disulfide oxidoreductase activity	GO:0019725//cellular homeostasis	K03676//glutaredoxin 3	gi|460389771|ref|XP_004240522.1|//PREDICTED: glutaredoxin-C13-like [Solanum lycopersicum]
Solyc01g096930.3.1	4708	324.084766751131	2273.92462780789	2.81074131995274	2.51112885978106e-10	Up	1.61274602109839e-11	GO:0031224//intrinsic component of membrane	GO:0046872//metal ion binding;GO:0042625//ATPase coupled ion transmembrane transporter activity;GO:0032559//adenyl ribonucleotide binding;GO:0005548//phospholipid transporter activity	GO:0006869//lipid transport;GO:0009206//purine ribonucleoside triphosphate biosynthetic process	K14802//phospholipid-transporting ATPase [EC:3.6.3.1]	gi|723661860|ref|XP_010327504.1|//PREDICTED: phospholipid-transporting ATPase 1 [Solanum lycopersicum]
Solyc06g066650.3.1	2134	217.777700771957	475.284365106439	1.12593470605853	0.0215068856154704	Up	0.00700488916460342	NA	GO:0005088//Ras guanyl-nucleotide exchange factor activity;GO:0016772//transferase activity, transferring phosphorus-containing groups	GO:0006796//phosphate-containing compound metabolic process	K10418//dynein light chain LC8-type	gi|723709291|ref|XP_010322686.1|//PREDICTED: rop guanine nucleotide exchange factor 12-like isoform X3 [Solanum lycopersicum];gi|460392254|ref|XP_004241732.1|//PREDICTED: rop guanine nucleotide exchange factor 12-like isoform X1 [Solanum lycopersicum]
Solyc06g036340.3.1	1895	1498.86986157729	130.969848486838	-3.51656850577054	6.81117281491875e-11	Down	4.01896770762501e-12	NA	NA	NA	K11323//histone arginine demethylase JMJD6 [EC:1.14.11.-]	gi|460390171|ref|XP_004240713.1|//PREDICTED: uncharacterized protein At3g49140 [Solanum lycopersicum]
Solyc08g083260.3.1	2349	472.716418375968	1054.38255485631	1.15735152740979	0.00134324891946381	Up	0.000307272946874513	NA	NA	NA	K13151//snurportin-1	gi|460399849|ref|XP_004245449.1|//PREDICTED: snurportin-1 [Solanum lycopersicum]
Solyc10g084670.2.1	1980	510.032316676396	199.612527535286	-1.35338639605298	0.0348202194393374	Down	0.0122353589031845	GO:0016282//eukaryotic 43S preinitiation complex;GO:0033290//eukaryotic 48S preinitiation complex;GO:0005852//eukaryotic translation initiation factor 3 complex	GO:0003743//translation initiation factor activity	GO:0006446//regulation of translational initiation;GO:0001731//formation of translation preinitiation complex	K03254//translation initiation factor 3 subunit A	gi|970052119|ref|XP_015087658.1|//PREDICTED: eukaryotic translation initiation factor 3 subunit A [Solanum pennellii];gi|723739441|ref|XP_010312283.1|//PREDICTED: eukaryotic translation initiation factor 3 subunit A-like [Solanum lycopersicum]
Solyc02g087230.3.1	1950	6217.43829679642	2370.06319712566	-1.39139475616665	2.74917810731855e-06	Down	3.51384066273867e-07	GO:0009536//plastid	GO:0043169//cation binding;GO:0016731//oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor;GO:0051536//iron-sulfur cluster binding	GO:0008152//metabolic process	K17892//ferredoxin-thioredoxin reductase catalytic chain [EC:1.8.7.2]	gi|460372917|ref|XP_004232269.1|//PREDICTED: ferredoxin-thioredoxin reductase catalytic chain, chloroplastic [Solanum lycopersicum]
Solyc12g088300.2.1	689	29.0607312421792	5.98279569320064	-2.2801793030382	0.0278702913770145	Down	0.00945562069903032	NA	NA	NA	NA	gi|723752281|ref|XP_010314601.1|//PREDICTED: uncharacterized protein LOC101255075 isoform X1 [Solanum lycopersicum]
Solyc12g015710.2.1	2443	888.218494538643	108.073252186993	-3.0389051070411	3.18840204900755e-08	Down	2.83447848773036e-09	NA	GO:0003723//RNA binding;GO:0008649//rRNA methyltransferase activity;GO:0003676//nucleic acid binding	GO:0031167//rRNA methylation;GO:0006355//regulation of transcription, DNA-templated;GO:0006351//transcription, DNA-templated	K03500//16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176]	gi|460413109|ref|XP_004251938.1|//PREDICTED: probable 28S rRNA (cytosine-C(5))-methyltransferase isoform X2 [Solanum lycopersicum];gi|970069542|ref|XP_015061905.1|//PREDICTED: ribosomal RNA small subunit methyltransferase B isoform X1 [Solanum pennellii]
Solyc01g011340.3.1	4725	1041.52519126177	2819.72261259355	1.43685551179934	4.6046813744799e-06	Up	6.11626594243934e-07	NA	GO:0004721//phosphoprotein phosphatase activity;GO:0016791//phosphatase activity	GO:0006470//protein dephosphorylation	K04382//serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]	gi|350537893|ref|NP_001233804.1|//protein phosphatase 2A catalytic subunit [Solanum lycopersicum]
Solyc08g048240.3.1	3549	408.850210108028	182.11651356374	-1.16671063596085	0.00349329840228809	Down	0.000893377081336611	NA	NA	NA	K00288//methylenetetrahydrofolate dehydrogenase (NADP+) / methenyltetrahydrofolate cyclohydrolase / formyltetrahydrofolate synthetase [EC:1.5.1.5 3.5.4.9 6.3.4.3]	gi|971567746|ref|XP_015168697.1|//PREDICTED: bifunctional protein FolD 1, mitochondrial-like isoform X1 [Solanum tuberosum];gi|971567751|ref|XP_015168699.1|//PREDICTED: bifunctional protein FolD 1, mitochondrial-like isoform X4 [Solanum tuberosum];gi|460398858|ref|XP_004244965.1|//PREDICTED: bifunctional protein FolD 1, mitochondrial-like isoform X8 [Solanum lycopersicum];gi|971567748|ref|XP_015168698.1|//PREDICTED: bifunctional protein FolD 1, mitochondrial-like isoform X2 [Solanum tuberosum];gi|971567753|ref|XP_015168700.1|//PREDICTED: bifunctional protein FolD 1, mitochondrial-like isoform X5 [Solanum tuberosum];gi|970048000|ref|XP_015085543.1|//PREDICTED: bifunctional protein FolD 1, mitochondrial-like isoform X9 [Solanum pennellii]
Solyc02g089493.1.1	2389	38.9327665389101	153.396994049569	1.97821344174638	0.000419093704035983	Up	8.47466581331149e-05	GO:0044464//cell part;GO:0005622//intracellular	GO:0046914//transition metal ion binding;GO:0008270//zinc ion binding	NA	K12135//zinc finger protein CONSTANS	gi|45544885|gb|AAS67378.1|//CONSTANS 2 [Solanum lycopersicum]
Solyc11g045240.2.1	2911	332.096071187603	107.405983508485	-1.62852628831222	5.00235203329333e-05	Down	8.18186995754105e-06	NA	NA	NA	K01301//N-acetylated-alpha-linked acidic dipeptidase [EC:3.4.17.21]	gi|460410724|ref|XP_004250770.1|//PREDICTED: probable glutamate carboxypeptidase 2 [Solanum lycopersicum]
Solyc02g088290.3.1	5551	33.2155923414171	612.237847316609	4.20415968446111	5.13871167673387e-05	Up	8.43171641605133e-06	NA	NA	NA	K18443//golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1	gi|723671346|ref|XP_010316243.1|//PREDICTED: LOW QUALITY PROTEIN: ARF guanine-nucleotide exchange factor GNOM-like [Solanum lycopersicum]
Solyc11g006400.2.1	1149	256.22710477714	112.655763793996	-1.18550197017733	0.000408079004536822	Down	8.22607446151458e-05	GO:0044429//mitochondrial part	NA	NA	K15414//complement component 1 Q subcomponent-binding protein, mitochondrial	gi|460409009|ref|XP_004249933.1|//PREDICTED: mitochondrial acidic protein MAM33 [Solanum lycopersicum]
Solyc07g052790.2.1	3100	504.418774803113	6649.52740786457	3.72055792985338	2.74367061048526e-11	Up	1.52482961094137e-12	NA	NA	NA	K03283//heat shock 70kDa protein 1/8;K19613//leucine-rich repeat protein SHOC2	gi|723715606|ref|XP_010323797.1|//PREDICTED: TMV resistance protein N-like [Solanum lycopersicum]
Solyc04g081960.1.1	708	34.8751827549676	356.576020556256	3.35393700400257	7.55126938285326e-08	Up	7.22814215564603e-09	NA	NA	NA	NA	gi|460385399|ref|XP_004238391.1|//PREDICTED: uncharacterized protein At1g76070-like [Solanum lycopersicum]
Solyc11g021060.2.1	849	12615.1449523906	1217.95162479604	-3.37262804565492	0.00265157035096562	Down	0.000655776400725245	NA	GO:0004866//endopeptidase inhibitor activity	GO:0051346//negative regulation of hydrolase activity	NA	gi|350534604|ref|NP_001234661.1|//proteinase inhibitor type-2 TR8 precursor [Solanum lycopersicum]
Solyc08g067330.1.1	297	246.460319968903	30.2033405567011	-3.02857536309743	0.00552072378755591	Down	0.0014941842635099	GO:0031224//intrinsic component of membrane;GO:0009521//photosystem;GO:0009534//chloroplast thylakoid	GO:0043169//cation binding;GO:0046906//tetrapyrrole binding	GO:0006464//cellular protein modification process;GO:0006091//generation of precursor metabolites and energy	K08912//light-harvesting complex II chlorophyll a/b binding protein 1	gi|970047137|ref|XP_015085083.1|//PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like [Solanum pennellii]
Solyc06g066610.3.1	2163	644.213668579497	1359.14057540332	1.07708350474679	0.00269241848982424	Up	0.000667283828046869	NA	NA	NA	K20286//TATA element modulatory factor	gi|460392264|ref|XP_004241737.1|//PREDICTED: golgin candidate 5 isoform X2 [Solanum lycopersicum];gi|723709301|ref|XP_010322688.1|//PREDICTED: golgin candidate 5 isoform X1 [Solanum lycopersicum]
Solyc02g083460.3.1	1966	1304.1973214969	5011.0104345928	1.94193938003528	0.00935563726248115	Up	0.00271309295892737	NA	GO:0008233//peptidase activity	NA	K00924	gi|460373420|ref|XP_004232517.1|//PREDICTED: aspartic proteinase-like protein 1 isoform X2 [Solanum lycopersicum]
Solyc10g008730.3.1	388	62.157856886578	289.969647800918	2.22189322823187	0.000140469216601053	Up	2.54622707742254e-05	NA	NA	NA	NA	gi|460405354|ref|XP_004248141.1|//PREDICTED: uncharacterized protein LOC101255929 [Solanum lycopersicum]
Solyc10g050220.2.1	1254	7.26133271820902	555.949863894811	6.25857661548621	7.77147078828582e-33	Up	4.43206735726752e-35	NA	NA	NA	NA	gi|460406606|ref|XP_004248753.1|//PREDICTED: uncharacterized protein LOC101251726 isoform X2 [Solanum lycopersicum];gi|460406604|ref|XP_004248752.1|//PREDICTED: uncharacterized protein LOC101251726 isoform X1 [Solanum lycopersicum]
Solyc08g007040.3.1	848	8259.14547601333	1234.92301258011	-2.74157141811341	1.15538688888644e-16	Down	3.08786491475912e-18	GO:0043231//intracellular membrane-bounded organelle;GO:0043234//protein complex	GO:0003824//catalytic activity	GO:0006546//glycine catabolic process	K02437//glycine cleavage system H protein	gi|460397983|ref|XP_004244544.1|//PREDICTED: glycine cleavage system H protein, mitochondrial isoform X1 [Solanum lycopersicum]
Solyc03g115980.1.1	1395	34860.2216251589	873.176378797079	-5.31916482824335	2.24684823375674e-13	Down	9.07851306617083e-15	GO:0009536//plastid	GO:0016627//oxidoreductase activity, acting on the CH-CH group of donors	GO:0008654//phospholipid biosynthetic process;GO:0042360//vitamin E metabolic process;GO:0006779//porphyrin-containing compound biosynthetic process	K10960//geranylgeranyl reductase [EC:1.3.1.83]	gi|460380498|ref|XP_004235993.1|//PREDICTED: geranylgeranyl diphosphate reductase, chloroplastic [Solanum lycopersicum]
Solyc03g115850.3.1	1889	98.8373686399619	614.786882374724	2.63695787553234	6.5719208333475e-10	Up	4.52450342149726e-11	NA	NA	NA	K12581//CCR4-NOT transcription complex subunit 7/8;K13126//polyadenylate-binding protein;K05941//glutathione gamma-glutamylcysteinyltransferase [EC:2.3.2.15];K01054//acylglycerol lipase [EC:3.1.1.23]	gi|460380543|ref|XP_004236015.1|//PREDICTED: NAC domain-containing protein 100 [Solanum lycopersicum]
Solyc03g119930.1.1	1377	750.584749833917	110.299638805333	-2.76658691166766	2.83129886257132e-07	Down	2.98664670533653e-08	NA	NA	GO:0006810//transport	NA	gi|460379959|ref|XP_004235726.1|//PREDICTED: molybdate transporter 2 [Solanum lycopersicum]
Solyc06g062770.3.1	429	463.42131826925	176.615267526178	-1.39171435015929	0.0186229980592694	Down	0.00592745565931494	NA	NA	NA	NA	gi|723710161|ref|XP_010322841.1|//PREDICTED: uncharacterized protein LOC101257574 [Solanum lycopersicum]
Solyc08g083115.1.1	1447	176.686630924299	391.761744992969	1.14878364542336	0.0420730451342669	Up	0.0152653578849319	NA	GO:0016765//transferase activity, transferring alkyl or aryl (other than methyl) groups;GO:0048037//cofactor binding;GO:0003824//catalytic activity;GO:0030170//pyridoxal phosphate binding	GO:0019752//carboxylic acid metabolic process	K01761//methionine-gamma-lyase [EC:4.4.1.11]	gi|460399865|ref|XP_004245457.1|//PREDICTED: methionine gamma-lyase [Solanum lycopersicum];gi|970046654|ref|XP_015084840.1|//PREDICTED: methionine gamma-lyase-like [Solanum pennellii]
Solyc05g008990.3.1	2600	83.4362717914427	263.827469416323	1.66084818415331	0.0186033104704443	Up	0.00591841564280759	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460387490|ref|XP_004239410.1|//PREDICTED: probable serine/threonine-protein kinase At1g18390 isoform X1 [Solanum lycopersicum]
Solyc11g007030.2.1	4626	293.426227472025	962.736549699955	1.71414323245859	1.93519271928342e-06	Up	2.3998755692023e-07	NA	NA	NA	NA	gi|971575647|ref|XP_015170771.1|//PREDICTED: uncharacterized protein LOC102603800 isoform X2 [Solanum tuberosum];gi|970598232|ref|NP_001305141.1|//uncharacterized LOC101243844 isoform 2 [Solanum lycopersicum]
Solyc01g080870.3.1	2355	404.140787216118	7.00450932150157	-5.85043015935887	1.4056953390301e-09	Down	1.01806547030546e-10	NA	NA	NA	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460367286|ref|XP_004229506.1|//PREDICTED: protein NRT1/ PTR FAMILY 7.3-like [Solanum lycopersicum]
Solyc06g083170.3.1	1778	92.4740444670718	38.5781357283062	-1.26126506062111	0.0322405242434122	Down	0.0112039066468366	NA	NA	NA	K16189//phytochrome-interacting factor 4;K11253//histone H3;K12126//phytochrome-interacting factor 3	gi|460393890|ref|XP_004242541.1|//PREDICTED: transcription factor bHLH62-like [Solanum lycopersicum]
Solyc04g074750.3.1	2997	2183.04350248713	379.23431309013	-2.52517946966063	6.66387383626779e-07	Down	7.50706512013349e-08	NA	GO:0005488//binding	NA	K13201//nucleolysin TIA-1/TIAR;K13126//polyadenylate-binding protein	gi|460384503|ref|XP_004237950.1|//PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Solanum lycopersicum]
Solyc11g071730.2.1	5276	226.560913595387	1737.33946201039	2.9389087792243	1.49305287521049e-17	Up	3.61743092622193e-19	NA	NA	NA	K10400//kinesin family member 15	gi|723746195|ref|XP_010313480.1|//PREDICTED: phragmoplast orienting kinesin 2 [Solanum lycopersicum]
Solyc03g078100.3.1	2107	331.528788973674	99.4943885622319	-1.73644708939627	0.000318454448229874	Down	6.26510577664111e-05	NA	NA	NA	K01051//pectinesterase [EC:3.1.1.11]	gi|460378647|ref|XP_004235080.1|//PREDICTED: probable pectinesterase/pectinesterase inhibitor 51 [Solanum lycopersicum]
Solyc08g080540.3.1	1535	213.837169511458	4405.8016369679	4.36481999035937	1.97220193359496e-17	Up	4.85184611664184e-19	NA	NA	NA	K09419//heat shock transcription factor, other eukaryote	gi|460400227|ref|XP_004245637.1|//PREDICTED: heat stress transcription factor B-2b [Solanum lycopersicum]
Solyc07g053640.1.1	1464	581.091918039538	105.400683441094	-2.4628821677106	1.33836047131817e-09	Down	9.65307705382684e-11	NA	NA	NA	NA	gi|460395619|ref|XP_004243379.1|//PREDICTED: GATA zinc finger domain-containing protein 14-like [Solanum lycopersicum]
Solyc01g104300.3.1	3469	459.34561592019	1597.17823540329	1.79787335323557	1.67575510221256e-06	Up	2.05502992630062e-07	NA	NA	NA	NA	gi|697152724|ref|XP_009630595.1|//PREDICTED: uncharacterized protein LOC104120526 isoform X1 [Nicotiana tomentosiformis];gi|460369312|ref|XP_004230507.1|//PREDICTED: uncharacterized protein LOC101258009 [Solanum lycopersicum]
Solyc07g007160.3.1	1185	485.550815442936	197.481497098694	-1.29790480191691	0.000176001000955986	Down	3.27098923052985e-05	NA	NA	NA	K11982//E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]	gi|460394228|ref|XP_004242706.1|//PREDICTED: RING-H2 finger protein ATL30 [Solanum lycopersicum]
Solyc09g059950.3.1	4826	60.805099228413	8.88170187507316	-2.77528426437556	0.000803600517582974	Down	0.000174391017346357	NA	NA	NA	K05292//phosphatidylinositol glycan, class T	gi|460403195|ref|XP_004247080.1|//PREDICTED: GPI transamidase component PIG-T [Solanum lycopersicum]
Solyc04g080790.3.1	2707	810.10996964204	2025.13770775144	1.32183034615358	0.00488860826930075	Up	0.00130342235538647	GO:0005634//nucleus	GO:0003677//DNA binding	GO:0006355//regulation of transcription, DNA-templated	K16670//homeobox protein Meis2;K15613//homeobox protein Meis1	gi|460385145|ref|XP_004238265.1|//PREDICTED: BEL1-like homeodomain protein 3 [Solanum lycopersicum]
Solyc04g006940.3.1	4382	117.790610711095	881.475924450625	2.90369662199692	3.12510259174334e-08	Up	2.7723811571303e-09	NA	NA	NA	K01530//phospholipid-translocating ATPase [EC:3.6.3.1]	gi|460382454|ref|XP_004236954.1|//PREDICTED: putative phospholipid-transporting ATPase 9 [Solanum lycopersicum]
Solyc01g095150.3.1	813	4957.71070496002	60747.3719820056	3.6150760029571	1.19720378210138e-07	Up	1.1830129813444e-08	NA	NA	GO:0009414//response to water deprivation;GO:0009269//response to desiccation	NA	gi|350535092|ref|NP_001234431.1|//late embryogenesis (Lea)-like protein [Solanum lycopersicum];gi|969995811|ref|XP_015080198.1|//PREDICTED: desiccation protectant protein Lea14 homolog [Solanum pennellii]
BGI_novel_G000298	381	1.6131486239234	21.3880878210436	3.72885623638736	0.00259959413592697	Up	0.000640693172310613	NA	NA	NA	NA	gi|565353569|ref|XP_006343702.1|//PREDICTED: uncharacterized protein LOC102605937 [Solanum tuberosum]
Solyc02g067840.3.1	1020	256.683288479997	1379.81392560024	2.42641244935214	1.50473899070327e-08	Up	1.27264528474196e-09	NA	NA	NA	NA	gi|460375054|ref|XP_004233323.1|//PREDICTED: altered inheritance of mitochondria protein 32-like [Solanum lycopersicum]
Solyc07g064490.3.1	4545	160.97415911649	72.1889087347258	-1.15698001340359	0.000569705809652741	Down	0.000119173587437423	NA	GO:0016791//phosphatase activity	NA	K14407//cleavage stimulation factor subunit 2	gi|460397146|ref|XP_004244129.1|//PREDICTED: CRS2-associated factor 2, mitochondrial [Solanum lycopersicum];gi|460397144|ref|XP_004244128.1|//PREDICTED: purple acid phosphatase 18 [Solanum lycopersicum]
Solyc11g010710.2.1	2613	43.8748675733423	291.557963661528	2.7323160532276	5.00389693285255e-08	Up	4.60885243815367e-09	NA	NA	NA	K09285//AP2-like factor, ANT lineage	gi|723741666|ref|XP_004250153.2|//PREDICTED: AP2-like ethylene-responsive transcription factor AIL6 [Solanum lycopersicum]
Solyc05g055750.3.1	1851	91.0241406346935	4.76612658226413	-4.25536004185263	4.15866985263847e-05	Down	6.7011815166826e-06	NA	NA	NA	K18835//WRKY transcription factor 2	gi|698489345|ref|XP_009791230.1|//PREDICTED: probable WRKY transcription factor 26 isoform X1 [Nicotiana sylvestris]
Solyc06g071570.3.1	2990	44.770230637041	10.261628274669	-2.12528008014376	0.00782579771540793	Down	0.00221898178101641	NA	NA	NA	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460391815|ref|XP_004241514.1|//PREDICTED: protein NRT1/ PTR FAMILY 2.11-like [Solanum lycopersicum]
Solyc10g076680.1.1	267	0.41452365291434	10.8038276670872	4.70394429742152	0.00203394274293095	Up	0.000486651202731241	NA	NA	NA	K04124//gibberellin 3-beta-dioxygenase [EC:1.14.11.15];K06892//feruloyl-CoA ortho-hydroxylase [EC:1.14.11.-]	gi|970057377|ref|XP_015055336.1|//PREDICTED: leucoanthocyanidin dioxygenase-like [Solanum pennellii]
Solyc04g077840.2.1	614	12.8122343158223	43.5726479540951	1.7659007018478	0.00859640286534275	Up	0.00246247785970475	NA	NA	NA	NA	gi|970021652|ref|XP_015072097.1|//PREDICTED: F-box/kelch-repeat protein At5g43190 [Solanum pennellii]
Solyc05g051620.3.1	1462	330.68496434434	946.150570055824	1.51661234154709	1.28703810618313e-11	Up	6.74030318766696e-13	NA	NA	NA	K03026//DNA-directed RNA polymerase III subunit RPC4	gi|723702259|ref|XP_010321476.1|//PREDICTED: DNA-directed RNA polymerase III subunit RPC4 [Solanum lycopersicum]
Solyc09g065410.3.1	1755	6.79366570176878	0.409370327307484	-4.05271178944461	0.013062935401278	Down	0.00395228293768352	NA	NA	NA	NA	gi|460403406|ref|XP_004247182.1|//PREDICTED: protein YLS3-like [Solanum lycopersicum]
Solyc07g063680.3.1	1697	870.108002128086	2554.76841907527	1.55392613010721	7.12128163040625e-05	Up	1.20378008774014e-05	NA	NA	NA	K06674//structural maintenance of chromosome 2;K20165//TBC1 domain family member 2A	gi|460397244|ref|XP_004244178.1|//PREDICTED: uncharacterized protein LOC101265561 [Solanum lycopersicum]
Solyc07g064650.2.1	1139	605.638961619195	3516.29146974314	2.53752473815811	2.10082390945787e-07	Up	2.16519237723685e-08	NA	NA	NA	NA	gi|460397110|ref|XP_004244111.1|//PREDICTED: phospholipase D C-like [Solanum lycopersicum]
Solyc01g005380.2.1	1818	513.258589020714	162.434849093118	-1.65982468064881	4.86342239039262e-05	Down	7.92744375771095e-06	NA	NA	NA	K19199//histone-lysine N-methyltransferase SETD3 [EC:2.1.1.43]	gi|460365506|ref|XP_004228642.1|//PREDICTED: histone-lysine N-methyltransferase setd3 [Solanum lycopersicum]
Solyc09g010650.1.1	453	16.2524769961707	77.0987441379137	2.24604774810304	0.00245547132055497	Up	0.000601145655039699	NA	NA	NA	K19041//E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27]	gi|723727502|ref|XP_004246875.2|//PREDICTED: RING-H2 finger protein ATL33 [Solanum lycopersicum]
Solyc01g105230.3.1	7165	760.442444951837	3744.73311433558	2.29995193704088	1.59088312425794e-17	Up	3.88410782163765e-19	NA	NA	NA	K11842//ubiquitin carboxyl-terminal hydrolase 12/46 [EC:3.4.19.12]	gi|723664466|ref|XP_010315109.1|//PREDICTED: calmodulin-binding transcription activator 2 isoform X3 [Solanum lycopersicum];gi|723664469|ref|XP_010315110.1|//PREDICTED: calmodulin-binding transcription activator 2 isoform X4 [Solanum lycopersicum];gi|460369359|ref|XP_004230530.1|//PREDICTED: calmodulin-binding transcription activator 2 isoform X1 [Solanum lycopersicum]
Solyc09g009700.3.1	1205	231.957271802804	80.9712313576556	-1.51837775265732	0.0296595857752396	Down	0.0101577558559304	NA	GO:0016787//hydrolase activity	GO:0044238//primary metabolic process	K21026	gi|460402046|ref|XP_004246526.1|//PREDICTED: GDSL esterase/lipase At5g03610-like [Solanum lycopersicum]
Solyc08g077680.3.1	2938	1083.96069432176	3700.23913265886	1.77130606591944	8.71799240029147e-06	Up	1.22964377675201e-06	NA	NA	NA	K09291//nucleoprotein TPR;K20478//golgin subfamily B member 1	gi|460400638|ref|XP_004245840.1|//PREDICTED: ELKS/Rab6-interacting/CAST family member 1 [Solanum lycopersicum]
Solyc05g005280.3.1	2467	358.996471797254	52.8554109237562	-2.76384658924929	3.37648310242216e-09	Down	2.59516481183633e-10	NA	NA	NA	K13459//disease resistance protein RPS2	gi|460385938|ref|XP_004238657.1|//PREDICTED: probable inactive poly [ADP-ribose] polymerase SRO2 [Solanum lycopersicum]
Solyc01g102700.3.1	3971	467.12564940617	1208.06605566574	1.37081677234948	8.33083309751356e-05	Up	1.42935831026744e-05	GO:0016021//integral component of membrane	GO:0004674//protein serine/threonine kinase activity;GO:0000166//nucleotide binding;GO:0008168//methyltransferase activity;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process;GO:0032259//methylation	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K20298//vacuolar protein sorting-associated protein 52;K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1];K13415//protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1]	gi|255556693|ref|XP_002519380.1|//PREDICTED: uncharacterized protein LOC8262637 [Ricinus communis];gi|460369079|ref|XP_004230391.1|//PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770 [Solanum lycopersicum]
Solyc10g080397.1.1	2550	568.592457861596	173.266549734946	-1.71440180293968	3.04312194591505e-10	Down	1.98730790563708e-11	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K00872//homoserine kinase [EC:2.7.1.39];K01507//inorganic pyrophosphatase [EC:3.6.1.1];K10398//kinesin family member 11;K17479//glutaredoxin domain-containing cysteine-rich protein 1;K05658//ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:3.6.3.44];K11593//eukaryotic translation initiation factor 2C	gi|971549805|ref|XP_015164066.1|//PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like [Solanum tuberosum];gi|971558281|ref|XP_015166153.1|//PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like [Solanum tuberosum];gi|723667803|ref|XP_010315628.1|//PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like [Solanum lycopersicum]
Solyc11g007780.2.1	1541	472.470681191872	971.16072663749	1.03948527397644	0.000841197779403503	Up	0.00018367886505687	NA	NA	NA	K14003//prolactin regulatory element-binding protein	gi|460409178|ref|XP_004250016.1|//PREDICTED: SEC12-like protein 1 [Solanum lycopersicum]
Solyc02g068610.2.1	1565	7.77505011603051	0.374969084472072	-4.37400841651702	0.0052440333921912	Down	0.00140952455610149	NA	NA	NA	NA	gi|723676466|ref|XP_004233910.2|//PREDICTED: uncharacterized protein LOC101247887 [Solanum lycopersicum]
BGI_novel_G000003	1111	1.10647773346106	26.2161554617501	4.56640980916324	3.12165222622e-05	Up	4.917288768453e-06	NA	NA	NA	K17604//zinc finger SWIM domain-containing protein 3	gi|723754438|ref|XP_004253385.2|//PREDICTED: uncharacterized protein LOC101266619 isoform X1 [Solanum lycopersicum]
Solyc10g074890.2.1	4591	541.137311254057	1237.30585203812	1.19313554374001	1.24872024962939e-05	Up	1.80223826098293e-06	GO:0016020//membrane	GO:0004674//protein serine/threonine kinase activity;GO:0000166//nucleotide binding;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1];K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|460407173|ref|XP_004249029.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g06840 [Solanum lycopersicum]
Solyc03g078010.1.1	501	97.1448865939186	15.6725561339418	-2.63189756176654	0.0020814075577858	Down	0.000498938869991071	GO:0009532//plastid stroma;GO:0009509//chromoplast	GO:0032559//adenyl ribonucleotide binding;GO:0016462//pyrophosphatase activity	NA	K10747//DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]	gi|108773172|ref|YP_635682.1|//Ycf2 [Solanum tuberosum]
Solyc06g050810.3.1	2035	244.844442920417	1469.03604914366	2.58493244148853	8.74053339892611e-07	Up	1.01095404565632e-07	NA	NA	NA	NA	gi|460390572|ref|XP_004240903.1|//PREDICTED: protein LURP-one-related 14-like [Solanum lycopersicum]
Solyc12g005450.1.1	1032	73.8051350184957	647.492265275118	3.13306985804182	9.58572126645108e-12	Up	4.91648742457011e-13	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460412210|ref|XP_004251495.1|//PREDICTED: probable receptor-like protein kinase At4g10390 [Solanum lycopersicum]
Solyc02g083380.3.1	1785	428.285179627067	1986.42388435851	2.21352985319354	2.03204281070176e-08	Up	1.75042900534209e-09	NA	GO:0033743//peptide-methionine (R)-S-oxide reductase activity	GO:0055114//oxidation-reduction process	NA	gi|697171336|ref|XP_009594599.1|//PREDICTED: uncharacterized protein LOC104091051 isoform X1 [Nicotiana tomentosiformis];gi|702482516|ref|XP_010033535.1|//PREDICTED: uncharacterized protein LOC104422805 [Eucalyptus grandis];gi|460373436|ref|XP_004232525.1|//PREDICTED: uncharacterized protein LOC101245418 [Solanum lycopersicum];gi|970011959|ref|XP_015066908.1|//PREDICTED: uncharacterized protein LOC107011781 [Solanum pennellii]
Solyc12g006510.2.1	2956	21.6717591528365	4.58981112094645	-2.23930957502364	0.0126976600049613	Down	0.00382330764574613	NA	GO:0016853//isomerase activity;GO:0016866//intramolecular transferase activity	NA	K15813//beta-amyrin synthase [EC:5.4.99.39]	gi|460412350|ref|XP_004251564.1|//PREDICTED: beta-amyrin synthase-like isoform X1 [Solanum lycopersicum];gi|970065734|ref|XP_015059827.1|//PREDICTED: beta-amyrin synthase [Solanum pennellii]
Solyc04g076260.2.1	753	217.836350491559	41.0197629844668	-2.40885365664562	0.0091432553412696	Down	0.0026409380363612	NA	NA	NA	K02183//calmodulin	gi|460384584|ref|XP_004237990.1|//PREDICTED: uncharacterized protein At5g64816-like [Solanum lycopersicum]
Solyc07g044970.1.1	642	1.1218064460467	21.0090136667173	4.22711274862587	0.000242962671326036	Up	4.65041492939912e-05	NA	NA	NA	NA	gi|747074129|ref|XP_011084046.1|//PREDICTED: uncharacterized protein LOC105166406 [Sesamum indicum]
Solyc08g081230.1.1	1392	495.16363235703	4361.45533661245	3.1388323520692	1.10639101913351e-08	Up	9.20480376735501e-10	GO:0005887//integral component of plasma membrane	GO:0005267//potassium channel activity	GO:0030001//metal ion transport	NA	gi|460400137|ref|XP_004245592.1|//PREDICTED: BTB/POZ domain-containing protein At5g41330-like [Solanum lycopersicum]
Solyc01g109370.3.1	2636	200.714015798628	51.3139471541197	-1.96771845376244	0.0312655821523828	Down	0.0108196535225407	GO:0016021//integral component of membrane	GO:0016746//transferase activity, transferring acyl groups;GO:0016747//transferase activity, transferring acyl groups other than amino-acyl groups	GO:0008152//metabolic process	K13513//lysocardiolipin and lysophospholipid acyltransferase [EC:2.3.1.- 2.3.1.51]	gi|565399962|ref|XP_006365508.1|//PREDICTED: probable 1-acyl-sn-glycerol-3-phosphate acyltransferase 5 [Solanum tuberosum];gi|698436928|ref|XP_009802720.1|//PREDICTED: probable 1-acyl-sn-glycerol-3-phosphate acyltransferase 5 [Nicotiana sylvestris]
Solyc02g065190.3.1	1774	185.031031532523	557.055153481507	1.5900529292021	0.0472515650251637	Up	0.0175229543922526	NA	NA	NA	K20556	gi|460375265|ref|XP_004233427.1|//PREDICTED: geraniol 8-hydroxylase-like [Solanum lycopersicum]
Solyc03g019940.3.1	3842	2895.6281716824	1125.52872952814	-1.36327347491846	3.65070740815874e-05	Down	5.82687085199632e-06	GO:0044424//intracellular part;GO:0005737//cytoplasm	GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0004816//asparagine-tRNA ligase activity;GO:0004812//aminoacyl-tRNA ligase activity;GO:0003676//nucleic acid binding	GO:0006421//asparaginyl-tRNA aminoacylation;GO:0006418//tRNA aminoacylation for protein translation	K01893//asparaginyl-tRNA synthetase [EC:6.1.1.22]	gi|460377090|ref|XP_004234328.1|//PREDICTED: asparagine--tRNA ligase, chloroplastic/mitochondrial [Solanum lycopersicum]
Solyc07g044980.3.1	2784	2303.09127345669	11027.1672375905	2.25941873285446	1.71124639523629e-06	Up	2.10365685533371e-07	NA	NA	NA	K14508//regulatory protein NPR1	gi|350538711|ref|NP_001233844.1|//NIM1-like protein 2 [Solanum lycopersicum]
Solyc02g079870.3.1	1582	386.005397766608	139.244693582728	-1.47099867222893	1.57366703176552e-05	Down	2.32870810947857e-06	NA	NA	NA	NA	gi|460373918|ref|XP_004232759.1|//PREDICTED: uncharacterized protein LOC101267080 [Solanum lycopersicum]
Solyc03g098750.3.1	1586	412.248508822809	85.9767173703452	-2.26149634144284	5.256325312009e-07	Down	5.81119012800757e-08	NA	NA	NA	NA	NA
Solyc10g084690.2.1	2056	212.392040867904	658.246123475832	1.63189741609619	6.27339274923779e-05	Up	1.05156728765925e-05	NA	NA	NA	K12492//ADP-ribosylation factor GTPase-activating protein 1	gi|460408192|ref|XP_004249530.1|//PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD6 [Solanum lycopersicum]
Solyc01g107900.3.1	2217	2155.62548957219	21776.8634408576	3.33661771871201	2.94872084044591e-11	Up	1.64538359107929e-12	NA	NA	NA	K15406//wax-ester synthase / diacylglycerol O-acyltransferase [EC:2.3.1.75 2.3.1.20]	gi|460369841|ref|XP_004230765.1|//PREDICTED: O-acyltransferase WSD1-like [Solanum lycopersicum]
Solyc09g075910.1.1	2358	98.0691193887016	734.746312302886	2.90537538467552	3.91822856047813e-05	Up	6.28453015347301e-06	NA	GO:0005488//binding	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460404106|ref|XP_004247525.1|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Solanum lycopersicum]
Solyc10g078410.2.1	1795	191.030515108833	63.6473645602053	-1.5856304290246	0.00349990544496951	Down	0.000895719054165821	NA	NA	NA	K01640//hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]	gi|460407385|ref|XP_004249133.1|//PREDICTED: F-box protein At2g26850-like isoform X1 [Solanum lycopersicum];gi|723737958|ref|XP_010327750.1|//PREDICTED: F-box protein At2g26850-like isoform X2 [Solanum lycopersicum]
Solyc12g056800.2.1	1404	2287.63757063565	715.307826088553	-1.67722237365015	1.94670527487351e-05	Down	2.93877902312423e-06	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K00010//myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]	gi|460414392|ref|XP_004252555.1|//PREDICTED: uncharacterized oxidoreductase At4g09670 [Solanum lycopersicum]
Solyc03g025950.3.1	1027	1572.37644577751	4871.78999744249	1.63150528857218	1.06525277735404e-05	Up	1.52037158360244e-06	NA	GO:0005506//iron ion binding	NA	K17278//membrane-associated progesterone receptor component	gi|460377193|ref|XP_004234379.1|//PREDICTED: membrane steroid-binding protein 2-like [Solanum lycopersicum]
Solyc11g006000.2.1	2068	1348.50397287981	3569.03092682547	1.40417263090804	0.00291866050192577	Up	0.000729447542321913	GO:0005737//cytoplasm	GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity;GO:0004702//receptor signaling protein serine/threonine kinase activity	GO:0023014//signal transduction by protein phosphorylation;GO:0006464//cellular protein modification process	K04420//mitogen-activated protein kinase kinase kinase 2 [EC:2.7.11.25]	gi|350536095|ref|NP_001234485.1|//MAP3Ka [Solanum lycopersicum]
Solyc10g081470.2.1	1866	2789.01219608003	688.55443613503	-2.01811162174456	2.07030714700363e-09	Down	1.54030604794217e-10	NA	GO:0008233//peptidase activity	NA	K00275//pyridoxamine 5'-phosphate oxidase [EC:1.4.3.5]	gi|919184447|ref|NP_001299816.1|//lutescent 2 [Solanum lycopersicum]
Solyc02g067900.3.1	1754	200.603057438552	512.599339645398	1.35348802550968	6.59461653510858e-05	Up	1.10934487934043e-05	NA	NA	NA	NA	gi|723676730|ref|XP_010317082.1|//PREDICTED: uncharacterized protein LOC101254447 isoform X3 [Solanum lycopersicum];gi|460375038|ref|XP_004233315.1|//PREDICTED: uncharacterized protein LOC101254447 isoform X1 [Solanum lycopersicum]
Solyc07g055383.1.1	651	5.43536114100525	31.3529847471325	2.52815499115745	0.0405370149702856	Up	0.0146022867989931	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|565364404|ref|XP_006348914.1|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Solanum tuberosum]
Solyc08g075450.3.1	1861	1251.26885538751	380.539027441249	-1.71727548241543	2.96250620404049e-08	Down	2.61709397032054e-09	NA	NA	NA	K07874//Ras-related protein Rab-1A;K00801//farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]	gi|460400981|ref|XP_004246008.1|//PREDICTED: WAT1-related protein At4g19185-like [Solanum lycopersicum]
Solyc12g014120.2.1	2471	385.525598379489	854.464970531677	1.1481946923631	0.0133319558046255	Up	0.00404334571487127	NA	NA	NA	K19475//WAS/WASL-interacting protein	gi|565386272|ref|XP_006358954.1|//PREDICTED: uncharacterized protein LOC102579150 [Solanum tuberosum];gi|350536789|ref|NP_001234265.1|//uncharacterized protein LOC100505457 [Solanum lycopersicum]
Solyc06g061240.3.1	1424	1235.66768465279	3111.77931948113	1.33244894822596	0.00391307707234845	Up	0.00101560890318929	NA	NA	NA	NA	gi|723710299|ref|XP_010322863.1|//PREDICTED: uncharacterized protein LOC101268004 [Solanum lycopersicum]
Solyc03g026230.1.1	1584	98.6222674420363	4944.1674481576	5.64767037229804	1.41811547855365e-17	Up	3.42529756263144e-19	NA	GO:0022857//transmembrane transporter activity	GO:0006810//transport	K03327//multidrug resistance protein, MATE family	gi|460377145|ref|XP_004234355.1|//PREDICTED: MATE efflux family protein 5 [Solanum lycopersicum]
Solyc06g068830.2.1	1925	2.92203820738388	59.8002071387303	4.35510353423469	3.10770900434387e-05	Up	4.89069159696579e-06	NA	NA	NA	K09286//EREBP-like factor	gi|460393186|ref|XP_004242192.1|//PREDICTED: ethylene-responsive transcription factor ERF114-like [Solanum lycopersicum]
Solyc01g102840.3.1	2481	267.397878253662	1095.81521883583	2.03494462214187	0.00017648315206174	Up	3.28060786988183e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K03283//heat shock 70kDa protein 1/8;K19613//leucine-rich repeat protein SHOC2;K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|723666827|ref|XP_010315476.1|//PREDICTED: uncharacterized protein LOC101251930 [Solanum lycopersicum]
Solyc01g088460.3.1	1377	726.354042663313	225.472432581935	-1.68772187142613	0.001140842524652	Down	0.000257017005330128	NA	NA	NA	K02881//large subunit ribosomal protein L18	gi|970003209|ref|XP_015062379.1|//PREDICTED: 50S ribosomal protein L18 [Solanum pennellii]
Solyc08g065150.1.1	1032	1504.44044237279	439.666764524342	-1.77474460957245	0.00214877396975495	Down	0.000517330068236439	NA	NA	NA	K07441//beta-1,4-N-acetylglucosaminyltransferase [EC:2.4.1.141]	gi|460399135|ref|XP_004245097.1|//PREDICTED: uncharacterized protein LOC101258979 [Solanum lycopersicum]
Solyc12g099500.2.1	360	152.328102811981	656.006033349331	2.10652695620993	0.000203055028903729	Up	3.82828513566073e-05	NA	NA	NA	NA	gi|970067044|ref|XP_015060596.1|//PREDICTED: uncharacterized protein LOC107006594 [Solanum pennellii]
Solyc02g063030.3.1	1859	868.730736419886	100.067128967662	-3.11794094081366	0.00230363549084878	Down	0.000558392038056867	NA	NA	NA	NA	gi|460375418|ref|XP_004233503.1|//PREDICTED: uncharacterized protein LOC101260301 [Solanum lycopersicum]
Solyc04g025880.3.1	3388	30.2549401302519	96.5487380618379	1.67408667277606	0.00173322075200131	Up	0.000407398615704497	GO:0044464//cell part	GO:0046873//metal ion transmembrane transporter activity	GO:0034220//ion transmembrane transport;GO:0030001//metal ion transport	K03549//KUP system potassium uptake protein	gi|460383079|ref|XP_004237259.1|//PREDICTED: potassium transporter 6-like [Solanum lycopersicum]
Solyc05g051340.2.1	3343	308.706332463106	118.363411285188	-1.38301189577568	0.000848133536697877	Down	0.000185539378298313	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial;K17710//pentatricopeptide repeat domain-containing protein 1	gi|460389221|ref|XP_004240257.1|//PREDICTED: pentatricopeptide repeat-containing protein At1g66345, mitochondrial [Solanum lycopersicum]
Solyc02g079220.3.1	1879	733.979495402953	3742.82688485319	2.35031665618206	2.23110611041024e-06	Up	2.79511988858238e-07	GO:0031224//intrinsic component of membrane	GO:0022891//substrate-specific transmembrane transporter activity	GO:0071702//organic substance transport	K16055//trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12];K08150//MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13	gi|350538321|ref|NP_001234849.1|//hexose transporter 1 [Solanum lycopersicum]
Solyc08g080340.3.1	1852	428.295635078695	207.120969580419	-1.04813335030767	0.00477728952126632	Down	0.0012698244959054	NA	NA	NA	K13519//lysophospholipid acyltransferase [EC:2.3.1.51 2.3.1.23 2.3.1.-]	gi|460400253|ref|XP_004245650.1|//PREDICTED: lysophospholipid acyltransferase 1-like [Solanum lycopersicum]
Solyc08g068370.3.1	3768	990.138089760947	3132.58854288783	1.66165363800184	1.9548419104618e-05	Up	2.95251953973133e-06	NA	NA	NA	K10581//ubiquitin-conjugating enzyme E2 O [EC:2.3.2.24]	gi|460399481|ref|XP_004245269.1|//PREDICTED: target of Myb protein 1 [Solanum lycopersicum]
Solyc04g081770.3.1	1435	314.262444249719	814.176673826063	1.373372014828	0.0108281323873168	Up	0.00319580856727203	NA	NA	NA	K01188//beta-glucosidase [EC:3.2.1.21];K00679//phospholipid:diacylglycerol acyltransferase [EC:2.3.1.158];K01206//alpha-L-fucosidase [EC:3.2.1.51];K10960//geranylgeranyl reductase [EC:1.3.1.83]	gi|970021019|ref|XP_015071763.1|//PREDICTED: GDSL esterase/lipase EXL3-like [Solanum pennellii]
Solyc05g050710.3.1	1284	226.190602963411	18.5575716235873	-3.60745915204252	0.000710031454334636	Down	0.000151994581863867	NA	NA	NA	K06129//lysophospholipase III [EC:3.1.1.5]	gi|460388826|ref|XP_004240065.1|//PREDICTED: lecithin-cholesterol acyltransferase-like 1 [Solanum lycopersicum]
Solyc12g044400.2.1	3427	2462.65139216457	852.544075447329	-1.53036609068434	2.65116808327669e-09	Down	2.00408859135423e-10	NA	NA	NA	K03798//cell division protease FtsH [EC:3.4.24.-]	gi|460413981|ref|XP_004252353.1|//PREDICTED: ATP-dependent zinc metalloprotease FtsH [Solanum lycopersicum]
Solyc12g009700.2.1	1336	6.0589984053829	92.4735859343861	3.93189010346993	4.0237960129755e-08	Up	3.65513302654738e-09	NA	NA	NA	NA	gi|460413400|ref|XP_004252077.1|//PREDICTED: synaptotagmin-5-like [Solanum lycopersicum]
Solyc07g041680.2.1	348	1025.16369404997	282.694717498319	-1.85853746192857	0.0291621096341153	Down	0.00995911914670361	GO:0031224//intrinsic component of membrane;GO:0009941//chloroplast envelope	NA	NA	NA	gi|91209047|ref|YP_538908.1|//hypothetical chloroplast RF1 [Solanum bulbocastanum]
Solyc11g012780.2.1	853	229.257737734489	1535.65289893716	2.74380983044193	1.73224716895398e-08	Up	1.47474747796738e-09	NA	NA	NA	K12486//stromal membrane-associated protein	gi|460409754|ref|XP_004250303.1|//PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD13 isoform X1 [Solanum lycopersicum]
Solyc08g076497.1.1	1426	218.025943109664	540.963539312264	1.311031547522	0.0130566060207152	Up	0.00394939458245504	NA	GO:0005509//calcium ion binding	NA	K13448//calcium-binding protein CML	gi|460400934|ref|XP_004245986.1|//PREDICTED: probable calcium-binding protein CML18 [Solanum lycopersicum]
Solyc06g066630.1.1	1062	90.0927777012863	527.92283546358	2.55084370961334	3.67127664228466e-08	Up	3.30343738425345e-09	NA	GO:0016740//transferase activity	NA	NA	gi|460392256|ref|XP_004241733.1|//PREDICTED: long-chain-alcohol O-fatty-acyltransferase-like [Solanum lycopersicum]
Solyc01g005920.2.1	1719	419.427779469525	1395.9806712139	1.73478464404658	0.00307553442567953	Up	0.000774271638252555	NA	NA	NA	K03294//basic amino acid/polyamine antiporter, APA family;K11584//serine/threonine-protein phosphatase 2A regulatory subunit B'	gi|460365617|ref|XP_004228697.1|//PREDICTED: probable polyamine transporter At3g13620 [Solanum lycopersicum]
Solyc02g091080.2.1	1545	23.0949538263485	7.54567701060071	-1.61385540916224	0.0411312697609841	Down	0.014845475515826	NA	NA	NA	K03327//multidrug resistance protein, MATE family	gi|723670045|ref|XP_004232019.2|//PREDICTED: MATE efflux family protein DTX1-like [Solanum lycopersicum]
Solyc02g068050.3.1	2713	2418.58799876996	754.391490424199	-1.68077972272933	1.93781432627399e-05	Down	2.92391247679928e-06	GO:0009536//plastid	NA	NA	K19199//histone-lysine N-methyltransferase SETD3 [EC:2.1.1.43]	gi|723676646|ref|XP_010317061.1|//PREDICTED: uncharacterized protein LOC101250184 [Solanum lycopersicum]
Solyc03g095730.3.1	895	931.628896713486	2024.52732583615	1.11975782174835	6.98523488384956e-05	Up	1.17948091635003e-05	GO:0005743//mitochondrial inner membrane;GO:0070469//respiratory chain	NA	GO:0055114//oxidation-reduction process	NA	gi|1351365|sp|P48505.2|UCR11_SOLTU//RecName: Full=Ubiquinol-cytochrome c reductase complex 6.7 kDa protein; Short=CR6
Solyc02g094010.2.1	3286	91.6893530287375	2074.87886017696	4.50012908057775	2.42672985997262e-06	Up	3.06857092069472e-07	NA	GO:0004672//protein kinase activity	GO:0043170//macromolecule metabolic process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723668936|ref|XP_010315919.1|//PREDICTED: protein LYK2 [Solanum lycopersicum]
Solyc07g018000.3.1	2295	176.447746841478	470.955299112548	1.41634912476303	0.02877947596079	Up	0.00981128250847568	NA	NA	NA	K10777//DNA ligase 4 [EC:6.5.1.1]	gi|460394657|ref|XP_004242917.1|//PREDICTED: DNA ligase 4 isoform X1 [Solanum lycopersicum];gi|723713468|ref|XP_010323400.1|//PREDICTED: DNA ligase 4 isoform X5 [Solanum lycopersicum]
Solyc07g066560.1.1	381	80.846723279887	369.390955249983	2.19188733401157	0.000550972377281437	Up	0.000114823563492639	NA	NA	GO:0009725//response to hormone	K14488//SAUR family protein	gi|460396830|ref|XP_004243973.1|//PREDICTED: auxin-induced protein X15 [Solanum lycopersicum]
BGI_novel_G000293	1592	3.39466303731614	22.5680327249223	2.73294038183005	0.0251066228273961	Up	0.008391646298392	NA	NA	NA	NA	NA
Solyc03g097210.3.1	1771	1561.17988859953	707.30662264661	-1.14222910824443	0.0130017638246224	Down	0.00392940835008104	NA	GO:0019206//nucleoside kinase activity;GO:0016773//phosphotransferase activity, alcohol group as acceptor	GO:0019321//pentose metabolic process;GO:0006796//phosphate-containing compound metabolic process	K00856//adenosine kinase [EC:2.7.1.20];K00847//fructokinase [EC:2.7.1.4]	gi|723683710|ref|XP_010318288.1|//PREDICTED: adenosine kinase [Solanum lycopersicum]
Solyc02g091070.3.1	3086	11.1082935442544	46.1179272069056	2.0536904648269	0.0334875246715227	Up	0.0117009115950072	NA	NA	NA	K03327//multidrug resistance protein, MATE family	gi|460372403|ref|XP_004232020.1|//PREDICTED: MATE efflux family protein 5-like [Solanum lycopersicum]
Solyc06g069420.3.1	1363	131.238826118661	399.882444331685	1.60738135056637	0.0184212468168476	Up	0.00584676146732731	NA	NA	NA	NA	gi|970036430|ref|XP_015079550.1|//PREDICTED: uncharacterized protein LOC107023381 [Solanum pennellii]
Solyc06g084060.3.1	2318	426.252210605939	1041.43854614175	1.28879848914221	0.000510804866691609	Up	0.000105405387729415	NA	NA	NA	NA	gi|460393504|ref|XP_004242349.1|//PREDICTED: F-box/LRR-repeat protein 17-like [Solanum lycopersicum]
Solyc09g074650.3.1	1683	2401.9494097004	654.932046265438	-1.87478863512752	1.30694110354903e-10	Down	8.03319621198881e-12	GO:0044424//intracellular part	GO:0003747//translation release factor activity	GO:0006412//translation	K02835//peptide chain release factor 1	gi|970053649|ref|XP_015088457.1|//PREDICTED: peptide chain release factor APG3, chloroplastic isoform X1 [Solanum pennellii];gi|460403953|ref|XP_004247450.1|//PREDICTED: peptide chain release factor 1-like, mitochondrial [Solanum lycopersicum]
Solyc03g124030.3.1	3361	3503.44818665769	1468.36903073163	-1.25456096793258	0.0130017638246224	Down	0.00392941334016842	NA	NA	NA	K14488//SAUR family protein	gi|970017176|ref|XP_015069714.1|//PREDICTED: uncharacterized protein LOC107014356 isoform X2 [Solanum pennellii];gi|460379498|ref|XP_004235499.1|//PREDICTED: uncharacterized protein LOC101262497 [Solanum lycopersicum]
Solyc01g007110.3.1	5589	249.220741234256	963.311707304146	1.95057855851342	4.75224936082519e-05	Up	7.72674508421034e-06	NA	NA	NA	K07179//RIO kinase 2 [EC:2.7.11.1]	gi|460365574|ref|XP_004228676.1|//PREDICTED: uncharacterized protein LOC101262646 [Solanum lycopersicum]
Solyc01g006740.3.1	1835	123.223277471666	42.993404089078	-1.51908756559929	0.0026100415225919	Down	0.000643851751771031	NA	GO:0000287//magnesium ion binding;GO:0046872//metal ion binding;GO:0050307//sucrose-phosphate phosphatase activity;GO:0016791//phosphatase activity	GO:0005986//sucrose biosynthetic process;GO:0005985//sucrose metabolic process;GO:0016311//dephosphorylation;GO:0006796//phosphate-containing compound metabolic process	K07024;K14514//ethylene-insensitive protein 3	gi|460365453|ref|XP_004228616.1|//PREDICTED: sucrose-phosphatase 1 isoform X2 [Solanum lycopersicum];gi|723655715|ref|XP_010315846.1|//PREDICTED: sucrose-phosphatase 1 isoform X1 [Solanum lycopersicum]
Solyc11g044390.1.1	237	1.39699816737942	10.2642738899378	2.87722953936045	0.0218271253596904	Up	0.00712788772392821	NA	NA	GO:0006950//response to stress	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|565405245|ref|XP_006368018.1|//PREDICTED: osmotin-like protein OSML13 [Solanum tuberosum]
Solyc12g036320.2.1	2317	11.7284746006962	61.7070032501186	2.3954188435857	0.011643790016332	Up	0.00346518635345141	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|723750294|ref|XP_010314198.1|//PREDICTED: probable serine/threonine-protein kinase At1g18390 isoform X2 [Solanum lycopersicum]
Solyc10g008460.3.1	1781	78.7029791400981	262.803000147444	1.73949159335187	2.11764862362026e-07	Up	2.18647930797231e-08	NA	NA	NA	NA	gi|460405386|ref|XP_004248157.1|//PREDICTED: lanC-like protein GCL2 isoform X1 [Solanum lycopersicum]
Solyc01g086850.3.1	2344	187.044046773723	1299.25532278168	2.79623501571846	2.59545719112903e-09	Up	1.95907291338761e-10	NA	GO:0032561//guanyl ribonucleotide binding	GO:0006810//transport;GO:0035556//intracellular signal transduction	K07904//Ras-related protein Rab-11A	gi|460367485|ref|XP_004229604.1|//PREDICTED: ras-related protein RGP1 [Solanum lycopersicum]
Solyc02g020890.3.1	2344	436.74947434548	2769.56630233838	2.66478220458731	3.73089866593369e-27	Up	3.4210566267321e-29	NA	NA	NA	K15891//farnesol dehydrogenase [EC:1.1.1.216];K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|460371388|ref|XP_004231521.1|//PREDICTED: transmembrane protein 53 [Solanum lycopersicum];gi|565352227|ref|XP_006343048.1|//PREDICTED: transmembrane protein 53-like [Solanum tuberosum]
Solyc05g010140.3.1	3228	464.008248856888	937.161829358726	1.01414774142994	0.00989627707959121	Up	0.00289127105076174	GO:0016021//integral component of membrane	GO:0004674//protein serine/threonine kinase activity;GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process;GO:0006468//protein phosphorylation	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460386595|ref|XP_004238983.1|//PREDICTED: proline-rich receptor-like protein kinase PERK9 [Solanum lycopersicum];gi|970030413|ref|XP_015076488.1|//PREDICTED: proline-rich receptor-like protein kinase PERK9 [Solanum pennellii]
Solyc09g007680.3.1	5022	530.179967202913	223.952751957327	-1.24328776484093	0.00847822208141977	Down	0.00242451616999599	NA	GO:0046914//transition metal ion binding;GO:0003676//nucleic acid binding	GO:0006259//DNA metabolic process	K10604//E3 ubiquitin-protein ligase MGRN1 [EC:2.3.2.27];K05658//ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:3.6.3.44]	gi|460402329|ref|XP_004246665.1|//PREDICTED: uncharacterized protein LOC101249200 [Solanum lycopersicum]
Solyc09g064742.1.1	907	119.517684637575	26.7787729304046	-2.15806234539235	0.0211529499739182	Down	0.00687226449875769	NA	NA	NA	NA	NA
Solyc09g075940.3.1	2220	109.213723094101	13.2669760935575	-3.04124266376841	8.53118545689316e-08	Down	8.22654568994431e-09	NA	NA	NA	K00276//primary-amine oxidase [EC:1.4.3.21]	gi|723731801|ref|XP_010326653.1|//PREDICTED: uncharacterized protein LOC101254423 [Solanum lycopersicum]
Solyc03g123590.3.1	2553	99.97692381095	23.695635225158	-2.07697380062875	0.0171113977737866	Down	0.00536788145460668	NA	NA	NA	NA	gi|460379559|ref|XP_004235529.1|//PREDICTED: uncharacterized protein LOC101246610 [Solanum lycopersicum]
Solyc11g010940.2.1	1728	43.9336905001503	12.7585170728183	-1.78386703934172	0.0359792600182371	Down	0.0126962745859792	NA	NA	NA	K16222//Dof zinc finger protein DOF5.5	gi|460409481|ref|XP_004250167.1|//PREDICTED: dof zinc finger protein DOF5.7 [Solanum lycopersicum]
Solyc03g005980.3.1	1641	8.32881774842134	69.2549150955451	3.05573283555843	7.68771874723702e-06	Up	1.07200521221909e-06	GO:0031224//intrinsic component of membrane	NA	GO:0006810//transport	K09874//aquaporin NIP	gi|460376575|ref|XP_004234073.1|//PREDICTED: aquaporin NIP1-1-like [Solanum lycopersicum]
Solyc04g015070.3.1	898	131.717984931665	64.881964663712	-1.02156293537948	0.0352181594186224	Down	0.0123922552896897	NA	NA	NA	K12486//stromal membrane-associated protein	gi|460381846|ref|XP_004236652.1|//PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD11 [Solanum lycopersicum]
Solyc10g008260.2.1	776	0.530319162889993	173.153418584194	8.35097427506107	5.53332761862624e-13	Up	2.36777251609621e-14	NA	NA	NA	NA	gi|723734167|ref|XP_010327075.1|//PREDICTED: uncharacterized protein LOC104649466 [Solanum lycopersicum]
Solyc02g067730.2.1	1831	6.26249713402791	64.8446045271795	3.37217659512062	3.00471776597483e-05	Up	4.71293139973986e-06	GO:0044464//cell part	GO:0046914//transition metal ion binding;GO:0004518//nuclease activity	NA	K18327//RNA exonuclease 4 [EC:3.1.-.-]	gi|460375072|ref|XP_004233332.1|//PREDICTED: RNA exonuclease 4-like [Solanum lycopersicum]
Solyc02g068040.3.1	3465	230.325009731734	902.015913440244	1.96948181185988	1.06763913155813e-08	Up	8.86250315334708e-10	NA	NA	NA	NA	gi|723676655|ref|XP_010317064.1|//PREDICTED: uncharacterized protein LOC101250767 [Solanum lycopersicum]
Solyc11g010600.2.1	2854	9318.13246709424	3641.52891942972	-1.35549653757931	5.41969355139581e-06	Down	7.30456042539755e-07	NA	NA	NA	K13506//glycerol-3-phosphate O-acyltransferase 3/4 [EC:2.3.1.15]	gi|15144512|gb|AAK84479.1|//putative auxin growth promotor protein [Solanum lycopersicum];gi|698469622|ref|XP_009783617.1|//PREDICTED: uncharacterized protein At1g04910-like [Nicotiana sylvestris]
Solyc02g079350.3.1	1983	3.79890096414546	45.2061201577649	3.57286409569407	2.98903055330647e-06	Up	3.84603156031532e-07	GO:0044464//cell part	GO:0015932//nucleobase-containing compound transmembrane transporter activity	GO:0015931//nucleobase-containing compound transport	K15014//solute carrier family 29 (equilibrative nucleoside transporter), member 1/2/3	gi|460373965|ref|XP_004232782.1|//PREDICTED: equilibrative nucleotide transporter 3-like [Solanum lycopersicum]
Solyc01g009970.3.1	1395	1464.81483501087	349.595975774797	-2.06695782423592	2.27680875613025e-11	Down	1.2466945216771e-12	GO:0009507//chloroplast	GO:0016787//hydrolase activity	NA	NA	gi|460365071|ref|XP_004228429.1|//PREDICTED: uncharacterized protein LOC101263344 [Solanum lycopersicum]
Solyc01g088050.3.1	1437	788.478382566302	147.892346642462	-2.41452380610009	8.60633099344888e-08	Down	8.30542378933918e-09	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460367639|ref|XP_004229679.1|//PREDICTED: serine/threonine-protein kinase-like protein At3g51990 [Solanum lycopersicum]
Solyc03g113970.3.1	3501	116.147323410483	988.199623082769	3.08884659757556	2.16304721817713e-10	Up	1.37871281611857e-11	NA	GO:0005516//calmodulin binding	GO:0006950//response to stress	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723687421|ref|XP_004236137.2|//PREDICTED: uncharacterized protein LOC101255079 isoform X1 [Solanum lycopersicum];gi|723687427|ref|XP_010318928.1|//PREDICTED: uncharacterized protein LOC101255079 isoform X2 [Solanum lycopersicum];gi|723687437|ref|XP_010318931.1|//PREDICTED: uncharacterized protein LOC101248289 isoform X1 [Solanum lycopersicum]
Solyc07g018240.1.1	822	575.541546001917	56.4515941375005	-3.34983384742486	0.000249992471194578	Down	4.80453698180724e-05	NA	NA	NA	K10249//elongation of very long chain fatty acids protein 4 [EC:2.3.1.199]	gi|460394674|ref|XP_004242925.1|//PREDICTED: elongation of fatty acids protein 3-like [Solanum lycopersicum]
Solyc02g067940.2.1	1429	2.02856818570641	24.0857192755918	3.56964430661045	0.025473610369648	Up	0.00853556632354443	NA	NA	NA	NA	gi|565381637|ref|XP_006357171.1|//PREDICTED: uncharacterized protein LOC102596135 [Solanum tuberosum]
Solyc02g094420.3.1	1037	2113.32731559445	325.159550162094	-2.70029652907874	3.23415770531068e-07	Down	3.44415855228589e-08	NA	NA	NA	K00891//shikimate kinase [EC:2.7.1.71]	gi|460371859|ref|XP_004231752.1|//PREDICTED: probable inactive shikimate kinase like 1, chloroplastic [Solanum lycopersicum]
Solyc04g007860.3.1	2147	2073.98451585791	5049.79023998869	1.28381833873364	0.00087978775044196	Up	0.000193088947167223	GO:0030117//membrane coat	GO:0005515//protein binding;GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;GO:0035091//phosphatidylinositol binding	GO:0006901//vesicle coating;GO:0008152//metabolic process	K20043//clathrin coat assembly protein AP180	gi|525314059|ref|NP_001265941.1|//Hop-interacting protein THI028 [Solanum lycopersicum]
Solyc08g076160.3.1	3864	595.947601040756	1363.65593408816	1.1942222901281	0.000596035669090372	Up	0.000125503410417903	NA	GO:0031683//G-protein beta/gamma-subunit complex binding;GO:0004871//signal transducer activity;GO:0005525//GTP binding;GO:0003924//GTPase activity	GO:0007186//G-protein coupled receptor signaling pathway	K04630//guanine nucleotide-binding protein G(i) subunit alpha;K19729//guanine nucleotide-binding protein G(t) subunit alpha 3	gi|460400794|ref|XP_004245917.1|//PREDICTED: extra-large guanine nucleotide-binding protein 3 [Solanum lycopersicum]
Solyc11g069600.2.1	2635	894.950586544569	2318.44087337463	1.37327500120334	0.00343693258465374	Up	0.000876656093513699	NA	GO:0046872//metal ion binding	NA	K12837//splicing factor U2AF 65 kDa subunit	gi|460411505|ref|XP_004251151.1|//PREDICTED: uncharacterized protein LOC101263576 [Solanum lycopersicum]
Solyc08g079660.3.1	1108	3819.84577807878	978.220233106821	-1.96528318205772	5.92220732752198e-06	Down	8.04073065618491e-07	NA	NA	NA	K03696//ATP-dependent Clp protease ATP-binding subunit ClpC	gi|460400346|ref|XP_004245696.1|//PREDICTED: clp protease-related protein At4g12060, chloroplastic [Solanum lycopersicum]
Solyc07g027020.3.1	3352	629.541802481789	278.575986246617	-1.17623127777253	4.3704378147553e-05	Down	7.05708089068135e-06	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|697169913|ref|XP_009593863.1|//PREDICTED: inactive protein kinase SELMODRAFT_444075-like isoform X1 [Nicotiana tomentosiformis];gi|970041903|ref|XP_015082341.1|//PREDICTED: inactive protein kinase SELMODRAFT_444075-like isoform X1 [Solanum pennellii];gi|970041906|ref|XP_015082342.1|//PREDICTED: inactive protein kinase SELMODRAFT_444075-like isoform X2 [Solanum pennellii]
Solyc09g018510.3.1	1514	497.835725938254	239.278273731464	-1.05698035813092	0.00013024179310005	Down	2.33996363031997e-05	GO:0044464//cell part	GO:0016772//transferase activity, transferring phosphorus-containing groups	GO:0006796//phosphate-containing compound metabolic process	K15892//farnesol kinase [EC:2.7.1.-]	gi|460401499|ref|XP_004246260.1|//PREDICTED: probable phytol kinase 3, chloroplastic [Solanum lycopersicum]
Solyc02g088395.1.1	3617	460.745485107157	131.153140841944	-1.81271767127753	6.09205596726482e-06	Down	8.29744017607934e-07	NA	NA	NA	K08739//DNA mismatch repair protein MLH3	gi|698485889|ref|XP_009789706.1|//PREDICTED: uncharacterized protein LOC104237290 [Nicotiana sylvestris]
BGI_novel_G000519	4125	12.4233601190681	50.9409223841179	2.03576965372597	0.0296022417625546	Up	0.0101359099758024	NA	NA	NA	K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6];K03549//KUP system potassium uptake protein	gi|545693870|gb|AGW47867.1|//polyprotein [Phaseolus vulgaris]
Solyc02g087560.1.1	2045	528.666096240162	222.559814228698	-1.2481636877808	0.0145494801237473	Down	0.00446712642684159	NA	NA	NA	K17710//pentatricopeptide repeat domain-containing protein 1	gi|460372875|ref|XP_004232248.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g39980, chloroplastic [Solanum lycopersicum]
Solyc02g086710.3.1	1744	3633.35322125053	706.512657758012	-2.36251431310538	5.37558395949461e-14	Down	2.01173635579715e-15	NA	GO:0016655//oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor;GO:0050662//coenzyme binding	GO:0008152//metabolic process	K08232//monodehydroascorbate reductase (NADH) [EC:1.6.5.4]	gi|816197592|ref|NP_001295285.1|//Monodehydroascorbate reductase (NADH)-like protein [Solanum lycopersicum]
Solyc02g083775.1.1	510	1.05996439370566	8.92454238738534	3.07376239313545	0.0213572729742044	Up	0.00694819884146623	NA	NA	NA	K08874//transformation/transcription domain-associated protein	gi|723672739|ref|XP_010316422.1|//PREDICTED: uncharacterized protein LOC104644317 isoform X1 [Solanum lycopersicum]
Solyc10g078280.3.1	5671	273.022215765456	87.3421459255225	-1.64426846523029	0.000616357322709949	Down	0.000130150001235719	NA	GO:0005506//iron ion binding;GO:0003824//catalytic activity	GO:0008152//metabolic process	K00517	gi|460407357|ref|XP_004249119.1|//PREDICTED: uncharacterized protein LOC101263260 [Solanum lycopersicum]
Solyc03g120390.3.1	1111	236.9565933158	3647.59399274566	3.94425044497593	6.56887190472826e-43	Up	1.59153374760451e-45	NA	NA	NA	K14484//auxin-responsive protein IAA	gi|525313529|ref|NP_001266077.1|//IAA15 [Solanum lycopersicum]
Solyc10g085040.1.1	600	1061.56496221339	127.503716634475	-3.0575814530704	4.12098660365447e-18	Down	9.21646027356748e-20	NA	NA	NA	K13201//nucleolysin TIA-1/TIAR	gi|723739547|ref|XP_010312298.1|//PREDICTED: heme-binding-like protein At3g10130, chloroplastic [Solanum lycopersicum]
Solyc11g011840.2.1	1259	949.549920326775	122.114888274503	-2.95900474387529	6.87966603144031e-15	Down	2.26176585646726e-16	NA	GO:0003824//catalytic activity	NA	NA	gi|460409614|ref|XP_004250233.1|//PREDICTED: uncharacterized oxidoreductase At4g09670-like [Solanum lycopersicum]
Solyc09g064510.3.1	2546	241.412757251673	1214.37926164387	2.33064523748475	0.000730802975812076	Up	0.000156958653147055	NA	NA	NA	K14153//hydroxymethylpyrimidine kinase / phosphomethylpyrimidine kinase / thiamine-phosphate diphosphorylase [EC:2.7.1.49 2.7.4.7 2.5.1.3];K03707//thiaminase (transcriptional activator TenA) [EC:3.5.99.2]	gi|723730267|ref|XP_010326344.1|//PREDICTED: uncharacterized protein LOC101246176 [Solanum lycopersicum]
Solyc02g079930.3.1	1398	93.4106569471264	6.08636254194677	-3.93993497466412	4.24252793310977e-08	Down	3.8728011436506e-09	NA	NA	GO:0009108//coenzyme biosynthetic process	NA	gi|350534450|ref|NP_001234653.1|//phosphosulfolactate synthase-related protein [Solanum lycopersicum]
Solyc11g067240.2.1	2195	1569.02153178575	3803.81432621451	1.27758167568718	0.000233932745174289	Up	4.45839468494163e-05	NA	GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0042623//ATPase activity, coupled	NA	K12196//vacuolar protein-sorting-associated protein 4	gi|460411290|ref|XP_004251046.1|//PREDICTED: vacuolar protein sorting-associated protein 4 [Solanum lycopersicum];gi|460411292|ref|XP_004251047.1|//PREDICTED: vacuolar protein sorting-associated protein 4 isoform X1 [Solanum lycopersicum]
Solyc09g075870.2.1	3102	7.16981174022585	484.34467701953	6.0779550380468	1.17218561090321e-21	Up	1.84382856642744e-23	NA	NA	NA	K15718//linoleate 9S-lipoxygenase [EC:1.13.11.58]	gi|460403785|ref|XP_004247367.1|//PREDICTED: probable linoleate 9S-lipoxygenase 5 [Solanum lycopersicum]
Solyc11g069980.2.1	2400	10.5541701279377	1.96651403325153	-2.42410075769861	0.029889387373032	Down	0.0102565118591074	NA	NA	NA	K14754//interferon-induced GTP-binding protein Mx1	gi|723745968|ref|XP_004251412.2|//PREDICTED: dynamin-related protein 4C-like [Solanum lycopersicum]
Solyc01g096320.3.1	1157	147.39554392422	894.665879187464	2.60165608645215	6.67238743974579e-08	Up	6.31474269774659e-09	NA	NA	NA	K09338//homeobox-leucine zipper protein	gi|460368324|ref|XP_004230017.1|//PREDICTED: homeobox-leucine zipper protein ATHB-12 [Solanum lycopersicum]
Solyc12g013870.2.1	1655	1547.53087053494	619.345669513984	-1.32115145195975	4.19804502675686e-09	Down	3.2782556772982e-10	NA	NA	NA	NA	gi|460412953|ref|XP_004251860.1|//PREDICTED: uncharacterized protein LOC101250575 [Solanum lycopersicum]
Solyc02g093990.3.1	2878	52.625308902062	930.11496920923	4.14358035350277	9.02784358581565e-09	Up	7.39308646117377e-10	NA	GO:0016301//kinase activity	GO:0044237//cellular metabolic process	K00939//adenylate kinase [EC:2.7.4.3]	gi|460371938|ref|XP_004231791.1|//PREDICTED: probable adenylate kinase 7, mitochondrial [Solanum lycopersicum]
Solyc10g047050.2.1	3112	2171.20800718364	577.4504283788	-1.91072893855582	4.94624540409005e-12	Down	2.43919884807333e-13	NA	NA	NA	K01528//dynamin GTPase [EC:3.6.5.5];K17065//dynamin 1-like protein [EC:3.6.5.5]	gi|723736839|ref|XP_004248808.2|//PREDICTED: dynamin-like protein ARC5 [Solanum lycopersicum]
Solyc09g091960.3.1	1985	425.603075493607	13.292181854255	-5.0008587347559	2.00065681867655e-25	Down	2.12534364590285e-27	NA	GO:0044212//transcription regulatory region DNA binding	NA	K10802//high mobility group protein B1;K11446//histone demethylase JARID1 [EC:1.14.11.-];K09272//structure-specific recognition protein 1	gi|460404783|ref|XP_004247860.1|//PREDICTED: high mobility group B protein 15 [Solanum lycopersicum]
Solyc04g079880.3.1	2003	121.655523382182	713.720622987004	2.55255763707556	1.50170259770759e-10	Up	9.31427285889905e-12	GO:0016021//integral component of membrane	GO:0016746//transferase activity, transferring acyl groups;GO:0016747//transferase activity, transferring acyl groups other than amino-acyl groups	GO:0008152//metabolic process	K13513//lysocardiolipin and lysophospholipid acyltransferase [EC:2.3.1.- 2.3.1.51]	gi|460385052|ref|XP_004238219.1|//PREDICTED: probable 1-acyl-sn-glycerol-3-phosphate acyltransferase 4 [Solanum lycopersicum]
Solyc08g080310.1.1	1485	0.429016199744883	27.8300166108761	6.01946583431309	8.0464305171912e-06	Up	1.12622433994532e-06	NA	GO:0022857//transmembrane transporter activity	GO:0006810//transport	K03327//multidrug resistance protein, MATE family	gi|460401227|ref|XP_004246128.1|//PREDICTED: MATE efflux family protein 6-like [Solanum lycopersicum]
Solyc08g079110.3.1	1313	1410.28254685785	357.372108991839	-1.98048528306155	1.40875516474579e-10	Down	8.68525809784383e-12	NA	NA	NA	NA	gi|460400427|ref|XP_004245736.1|//PREDICTED: thylakoid lumenal protein At1g12250, chloroplastic [Solanum lycopersicum]
Solyc03g032010.3.1	1614	321.742762108012	1187.45969643	1.8838989485568	0.00127274340227043	Up	0.000289202118049179	GO:0031224//intrinsic component of membrane;GO:0043231//intracellular membrane-bounded organelle;GO:0031090//organelle membrane	GO:0016616//oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;GO:0000166//nucleotide binding;GO:0048037//cofactor binding	GO:0006732//coenzyme metabolic process;GO:0006720//isoprenoid metabolic process	K00021//hydroxymethylglutaryl-CoA reductase (NADPH) [EC:1.1.1.34]	gi|723680019|ref|XP_004234589.2|//PREDICTED: 3-hydroxy-3-methylglutaryl-coenzyme A reductase 3 [Solanum lycopersicum]
Solyc06g060570.3.1	1055	302.519009698041	7.36277354637339	-5.36063266127357	2.94020532122032e-23	Down	3.91252907289271e-25	NA	NA	NA	K02183//calmodulin	gi|460392818|ref|XP_004242010.1|//PREDICTED: dihydrofolate reductase-like [Solanum lycopersicum]
Solyc07g054180.3.1	2010	49.6213441864513	16.1475965098191	-1.61964137389677	0.0144191198994198	Down	0.00442065234727627	NA	NA	NA	K04645//clathrin light chain B	gi|460396497|ref|XP_004243809.1|//PREDICTED: clathrin light chain 1 [Solanum lycopersicum]
Solyc09g074410.3.1	1083	478.998918130297	113.984694955521	-2.07118227479855	5.66214539594285e-05	Down	9.37711047941483e-06	NA	NA	NA	K09841//xanthoxin dehydrogenase [EC:1.1.1.288]	gi|460403994|ref|XP_004247470.1|//PREDICTED: zerumbone synthase [Solanum lycopersicum]
Solyc08g066270.2.1	2151	23.6775679787836	277.378175770326	3.55026147178622	1.31459771284728e-05	Up	1.91103737889682e-06	NA	NA	NA	K00924	gi|723722578|ref|XP_004245385.2|//PREDICTED: LRR receptor-like serine/threonine-protein kinase HSL2 [Solanum lycopersicum]
BGI_novel_G000023	824	1.84088735890822	26.6766403198982	3.85710372546008	0.000180224819678031	Up	3.35419160821682e-05	NA	NA	NA	NA	gi|723703472|ref|XP_010321683.1|//PREDICTED: uncharacterized protein LOC104647741 [Solanum lycopersicum]
Solyc02g084265.1.1	1886	5.88561522088146	46.5019767578965	2.98202691265021	2.90226038638719e-05	Up	4.53816248728726e-06	NA	NA	NA	K08739//DNA mismatch repair protein MLH3	gi|971539159|ref|XP_015160667.1|//PREDICTED: DNA mismatch repair protein MLH3 isoform X7 [Solanum tuberosum];gi|697105041|ref|XP_009606330.1|//PREDICTED: DNA mismatch repair protein MLH3 [Nicotiana tomentosiformis]
Solyc01g106090.3.1	3567	1923.58046602679	544.521641695391	-1.82073288655418	1.43023922666608e-07	Down	1.43119730945276e-08	NA	NA	NA	K06268//serine/threonine-protein phosphatase 2B regulatory subunit;K02717//photosystem II oxygen-evolving enhancer protein 2;K13407//fatty acid omega-hydroxylase [EC:1.14.-.-];K17892//ferredoxin-thioredoxin reductase catalytic chain [EC:1.8.7.2]	gi|460369536|ref|XP_004230618.1|//PREDICTED: psbP domain-containing protein 1, chloroplastic isoform X1 [Solanum lycopersicum];gi|460369564|ref|XP_004230632.1|//PREDICTED: uncharacterized protein LOC101243832 [Solanum lycopersicum]
Solyc05g053835.1.1	3759	3266.60783622731	7740.24863461165	1.24458664348249	0.00245537719357147	Up	0.000601031088049197	NA	NA	NA	K09667//protein O-GlcNAc transferase [EC:2.4.1.255]	gi|460388382|ref|XP_004239846.1|//PREDICTED: probable UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase SEC isoform X1 [Solanum lycopersicum]
Solyc11g013830.2.1	4932	444.936409087892	192.505425453644	-1.2087000524861	0.0311568124281986	Down	0.01077039952509	NA	NA	NA	K00921//1-phosphatidylinositol-3-phosphate 5-kinase [EC:2.7.1.150]	gi|723742546|ref|XP_010312807.1|//PREDICTED: putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1D [Solanum lycopersicum]
Solyc08g006320.3.1	1537	2660.15094277783	7657.58359056177	1.52538110072226	0.0487323334882685	Up	0.0181465637225213	NA	GO:0003677//DNA binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0010467//gene expression	K13425//WRKY transcription factor 22	gi|460397860|ref|XP_004244484.1|//PREDICTED: probable WRKY transcription factor 11 [Solanum lycopersicum]
Solyc05g054990.3.1	1199	526.910714631779	196.037634031949	-1.42642787679244	0.000741656245837305	Down	0.000159649053962667	NA	NA	NA	K02990//small subunit ribosomal protein S6	gi|460388180|ref|XP_004239747.1|//PREDICTED: uncharacterized protein LOC101251184 [Solanum lycopersicum]
Solyc03g098450.3.1	4243	300.732670076072	131.50809939451	-1.19332994775277	0.0431902014062843	Down	0.0157431407317748	NA	GO:0003779//actin binding	NA	K20478//golgin subfamily B member 1	gi|460379468|ref|XP_004235484.1|//PREDICTED: uncharacterized protein LOC101266916 [Solanum lycopersicum]
Solyc06g075170.1.1	492	102.981213415936	27.2115454836097	-1.92009037236197	0.00188306447840503	Down	0.000447186889089198	NA	NA	NA	NA	gi|460391328|ref|XP_004241275.1|//PREDICTED: uncharacterized protein LOC101262623 [Solanum lycopersicum]
Solyc01g103480.3.1	2183	2648.57938191789	5531.52880536101	1.06245951897021	0.000518663378257366	Up	0.00010720100016539	GO:0030119//AP-type membrane coat adaptor complex;GO:0030126//COPI vesicle coat;GO:0009506//plasmodesma;GO:0005829//cytosol	NA	GO:0006890//retrograde vesicle-mediated transport, Golgi to ER;GO:0015031//protein transport	K20471//coatomer subunit delta	gi|460369192|ref|XP_004230447.1|//PREDICTED: coatomer subunit delta-like [Solanum lycopersicum]
Solyc04g051570.3.1	10354	2067.60973707944	620.0350821253	-1.73754214969139	5.19428497670184e-06	Down	6.9778600924532e-07	NA	NA	NA	K19026//spatacsin	gi|723692392|ref|XP_010319794.1|//PREDICTED: uncharacterized protein LOC101246131 [Solanum lycopersicum]
Solyc11g006510.2.1	3281	1122.51454402074	133.264989957076	-3.07436441264327	1.35293198035772e-06	Down	1.62837981384191e-07	NA	NA	NA	K12198//charged multivesicular body protein 5;K13457//disease resistance protein RPM1	gi|723740722|ref|XP_010312508.1|//PREDICTED: uncharacterized protein LOC101260001 [Solanum lycopersicum];gi|723740719|ref|XP_010312507.1|//PREDICTED: putative late blight resistance protein homolog R1B-16 [Solanum lycopersicum]
Solyc12g089240.2.1	1551	26.8154680945346	365.785871082147	3.76986200775815	1.64504181792651e-22	Up	2.37301022639615e-24	NA	NA	NA	K12135//zinc finger protein CONSTANS;K19720//collagen, type III, alpha	gi|460414891|ref|XP_004252795.1|//PREDICTED: B-box zinc finger protein 20 [Solanum lycopersicum]
Solyc02g021230.3.1	1592	39.0148532119616	112.070180389974	1.52230708002901	0.00083599505032009	Up	0.000182387022123285	NA	NA	NA	NA	gi|460371415|ref|XP_004231533.1|//PREDICTED: uncharacterized protein At4g15970 [Solanum lycopersicum]
Solyc08g074960.3.1	2427	135.466079952092	43.9280163987525	-1.62471839289374	0.0387667039221792	Down	0.0138547471748119	NA	NA	NA	K14794//ribosomal RNA-processing protein 12	gi|460401055|ref|XP_004246045.1|//PREDICTED: uncharacterized protein LOC101262446 [Solanum lycopersicum]
Solyc01g106905.1.1	390	5.31245225914222	0.358412906889219	-3.88968347461475	0.0182895362780028	Down	0.00580086716078447	NA	NA	NA	NA	NA
Solyc01g081540.3.1	4833	812.818817137127	6661.98490859873	3.03494637920073	5.42834709881784e-15	Up	1.74618441414932e-16	NA	NA	NA	K10357//myosin V	gi|723659350|ref|XP_010323450.1|//PREDICTED: myosin-12 isoform X2 [Solanum lycopersicum];gi|747043993|ref|XP_011086747.1|//PREDICTED: myosin-12 [Sesamum indicum]
Solyc03g095985.1.1	1391	3002.73954215242	1414.28833499732	-1.08620306436159	4.01802012185785e-06	Down	5.26889622360813e-07	NA	NA	NA	NA	gi|723683449|ref|XP_010318243.1|//PREDICTED: uncharacterized protein LOC101259619 isoform X1 [Solanum lycopersicum];gi|460378969|ref|XP_004235239.1|//PREDICTED: uncharacterized protein LOC101259619 isoform X2 [Solanum lycopersicum]
Solyc04g071070.2.1	1224	500.816070587087	83.8522040916494	-2.57836024609978	0.022954485199155	Down	0.00755937366686054	NA	NA	NA	NA	NA
Solyc01g109550.2.1	978	695.970869679727	24.1223037997874	-4.85058731891377	1.48047707289872e-06	Down	1.79513639411791e-07	NA	NA	NA	K15032//mTERF domain-containing protein, mitochondrial	gi|723665830|ref|XP_004230958.2|//PREDICTED: uncharacterized protein LOC101266172 [Solanum lycopersicum]
Solyc06g054140.3.1	2722	65.5749017939504	23.90060544911	-1.4560965769304	0.0231542977068218	Down	0.00763208046151131	NA	NA	NA	NA	gi|460390873|ref|XP_004241049.1|//PREDICTED: uncharacterized protein LOC101260650 isoform X1 [Solanum lycopersicum];gi|723706661|ref|XP_010322257.1|//PREDICTED: uncharacterized protein LOC101260650 isoform X2 [Solanum lycopersicum]
Solyc09g083370.3.1	1089	430.409395527179	102.409488805629	-2.07136017602508	2.71314210439987e-05	Down	4.22424130389081e-06	GO:0030529//intracellular ribonucleoprotein complex	GO:0005198//structural molecule activity;GO:0003676//nucleic acid binding	GO:0010467//gene expression	K02958//small subunit ribosomal protein S15e	gi|723732208|ref|XP_010326720.1|//PREDICTED: 40S ribosomal protein S15 [Solanum lycopersicum]
Solyc07g042890.3.1	1930	2026.6415207077	7549.25757963466	1.89724384921081	1.88739675513801e-05	Up	2.84361774424775e-06	NA	NA	NA	K04424//sterile alpha motif and leucine zipper containing kinase AZK [EC:2.7.11.25];K17535//serine/threonine-protein kinase TNNI3K [EC:2.7.11.1];K04365//B-Raf proto-oncogene serine/threonine-protein kinase [EC:2.7.11.1]	gi|460396196|ref|XP_004243664.1|//PREDICTED: serine/threonine-protein kinase HT1-like [Solanum lycopersicum]
Solyc08g075750.3.1	1486	5398.38543642869	1974.61707680253	-1.45095507768607	7.04418120466918e-05	Down	1.19022190997336e-05	NA	GO:0004175//endopeptidase activity;GO:0004252//serine-type endopeptidase activity	GO:0006508//proteolysis;GO:0019538//protein metabolic process	K01358//ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	gi|460400918|ref|XP_004245978.1|//PREDICTED: ATP-dependent Clp protease proteolytic subunit 4, chloroplastic [Solanum lycopersicum]
Solyc02g089720.2.1	2217	261.437550025866	1054.81060668632	2.01244570941986	0.000875848610377501	Up	0.00019209382821907	NA	NA	NA	K01180//endo-1,3(4)-beta-glucanase [EC:3.2.1.6]	gi|460372572|ref|XP_004232103.1|//PREDICTED: putative endo-1,3(4)-beta-glucanase 2 isoform X1 [Solanum lycopersicum]
Solyc10g084840.2.1	2049	11.5275967534658	0.684888191969042	-4.07307947714934	0.0147515217448406	Down	0.00454015636824023	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460408212|ref|XP_004249540.1|//PREDICTED: thaumatin-like protein [Solanum lycopersicum]
Solyc03g096910.3.1	1460	429.968560948504	1477.89709947051	1.7812427436808	5.80983208145848e-08	Up	5.43812119618211e-09	GO:0044464//cell part	GO:0032561//guanyl ribonucleotide binding	GO:0035556//intracellular signal transduction	K07977//Arf/Sar family, other	gi|460379168|ref|XP_004235336.1|//PREDICTED: ADP-ribosylation factor 1-like 2 [Solanum lycopersicum]
Solyc04g050540.3.1	3782	2036.32527529335	614.740056180767	-1.72791963215639	3.02939206469892e-11	Down	1.6926564428894e-12	NA	GO:0005488//binding	NA	K02717//photosystem II oxygen-evolving enhancer protein 2;K11323//histone arginine demethylase JMJD6 [EC:1.14.11.-]	gi|460383599|ref|XP_004237508.1|//PREDICTED: uncharacterized protein LOC101246046 [Solanum lycopersicum]
Solyc11g021170.1.1	258	67.5950735877516	436.153807355722	2.68984697351932	0.0308972969435775	Up	0.0106576351887504	GO:0009536//plastid	NA	NA	NA	gi|965660006|dbj|BAT76425.1|//hypothetical protein VIGAN_01442300 [Vigna angularis var. angularis]
Solyc06g051800.3.1	1345	70.2984487610442	28.1351738706854	-1.3211179754172	0.0360048238668483	Down	0.0127066375567064	GO:0044464//cell part	NA	NA	K20628	gi|350539603|ref|NP_001233958.1|//expansin precursor [Solanum lycopersicum]
Solyc00g272810.1.1	726	332.075699498421	23886.3065972614	6.16852783139753	5.14679119128039e-18	Up	1.17503086550232e-19	NA	GO:0016747//transferase activity, transferring acyl groups other than amino-acyl groups	NA	NA	gi|460416368|ref|XP_004253515.1|//PREDICTED: probable acetyltransferase NATA1-like [Solanum lycopersicum]
Solyc05g018300.3.1	4402	1754.48314787484	750.804214568477	-1.22453743672576	2.34443837704337e-06	Down	2.95021021354496e-07	GO:0043234//protein complex;GO:0005886//plasma membrane	GO:0005524//ATP binding;GO:0016301//kinase activity;GO:0046872//metal ion binding;GO:0043169//cation binding;GO:0004721//phosphoprotein phosphatase activity;GO:0004672//protein kinase activity;GO:0019887//protein kinase regulator activity;GO:0032559//adenyl ribonucleotide binding	GO:0006470//protein dephosphorylation;GO:0006468//protein phosphorylation	K07376//cGMP-dependent protein kinase 1 [EC:2.7.11.12];K19584//protein kinase X [EC:2.7.11.11];K04739//cAMP-dependent protein kinase regulator;K19477//cGMP-dependent protein kinase 2 [EC:2.7.11.12]	gi|460387183|ref|XP_004239266.1|//PREDICTED: protein phosphatase 2C and cyclic nucleotide-binding/kinase domain-containing protein isoform X1 [Solanum lycopersicum]
Solyc07g054440.3.1	2685	413.263912694528	862.155867205528	1.06088532522169	0.00149819452777032	Up	0.000346905636145416	GO:0044464//cell part	GO:0035252//UDP-xylosyltransferase activity	NA	K20891	gi|460395510|ref|XP_004243326.1|//PREDICTED: xylosyltransferase 1 [Solanum lycopersicum]
Solyc07g043480.1.1	1371	7617.27788128994	679.442664240899	-3.48685180942961	0.00200188603388698	Down	0.000478234963142301	NA	NA	NA	K13495//cis-zeatin O-glucosyltransferase [EC:2.4.1.215]	gi|460396141|ref|XP_004243637.1|//PREDICTED: zeatin O-xylosyltransferase-like [Solanum lycopersicum]
Solyc08g076790.3.1	1409	171.069945221036	60.7956280290341	-1.49254683463505	0.0322667644944804	Down	0.011215430852506	NA	NA	NA	K09753//cinnamoyl-CoA reductase [EC:1.2.1.44]	gi|460400772|ref|XP_004245906.1|//PREDICTED: cinnamoyl-CoA reductase 2-like isoform X2 [Solanum lycopersicum]
Solyc11g012910.2.1	904	303.572909842019	133.339612911469	-1.18693760961331	0.00482601524525968	Down	0.001284754766723	NA	NA	NA	K07232//cation transport protein ChaC	gi|460409786|ref|XP_004250319.1|//PREDICTED: cation transport regulator-like protein 2 isoform X1 [Solanum lycopersicum]
Solyc07g052060.2.1	1142	40.7833106454008	0.640010680456451	-5.99373910186677	2.20879813704626e-05	Down	3.37725136356185e-06	NA	NA	NA	K13065//shikimate O-hydroxycinnamoyltransferase [EC:2.3.1.133]	gi|460395824|ref|XP_004243480.1|//PREDICTED: acetyl-CoA-benzylalcohol acetyltransferase-like [Solanum lycopersicum]
Solyc12g056790.2.1	3733	997.322915423641	3063.4246977096	1.61901278437532	8.54600935141647e-07	Up	9.87180668705816e-08	NA	NA	NA	K12581//CCR4-NOT transcription complex subunit 7/8;K13126//polyadenylate-binding protein;K05941//glutathione gamma-glutamylcysteinyltransferase [EC:2.3.2.15];K01054//acylglycerol lipase [EC:3.1.1.23]	gi|959241408|ref|NP_001304297.1|//stress-related NAC1 [Solanum lycopersicum]
Solyc04g081970.3.1	1245	6963.63177669999	1504.96588889633	-2.21010913043485	9.76464454212977e-07	Down	1.14214457183552e-07	NA	GO:0015036//disulfide oxidoreductase activity	GO:0019725//cellular homeostasis;GO:0018904//ether metabolic process	K03671//thioredoxin 1	gi|460385401|ref|XP_004238392.1|//PREDICTED: thioredoxin-like protein CDSP32, chloroplastic [Solanum lycopersicum]
Solyc04g078630.3.1	1673	75.0538515796764	560.567088892079	2.90088903124857	1.01180137949834e-06	Up	1.19064296819602e-07	NA	NA	NA	NA	gi|460384881|ref|XP_004238135.1|//PREDICTED: uncharacterized protein LOC101248478 [Solanum lycopersicum]
Solyc12g038520.2.1	2206	157.511628026592	61.2601629657956	-1.36243722709085	0.000485324364235956	Down	9.96409198677369e-05	NA	NA	NA	K20641;K13415//protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1]	gi|460413763|ref|XP_004252249.1|//PREDICTED: squamosa promoter-binding-like protein 6 [Solanum lycopersicum]
Solyc08g076400.3.1	1601	293.638550827739	69.7123548638573	-2.07455511985064	5.69118746518342e-09	Down	4.54183404016614e-10	NA	NA	NA	K06236//collagen, type I, alpha;K14491//two-component response regulator ARR-B family	gi|460400926|ref|XP_004245982.1|//PREDICTED: probable transcription factor KAN2 [Solanum lycopersicum]
Solyc11g017470.2.1	1385	1276.43350169458	10871.1827201019	3.09031862076504	4.05700999385331e-13	Up	1.70356707334649e-14	NA	GO:0003676//nucleic acid binding	NA	K12581//CCR4-NOT transcription complex subunit 7/8;K03094//S-phase kinase-associated protein 1;K13126//polyadenylate-binding protein;K01054//acylglycerol lipase [EC:3.1.1.23]	gi|525313915|ref|NP_001265908.1|//NAC domain-containing protein 2-like [Solanum lycopersicum]
Solyc05g006510.1.1	1158	474.5226465332	1325.33738654826	1.48181082186978	0.00310396767972717	Up	0.000783049547353269	NA	NA	NA	K20893	gi|970026625|ref|XP_015074628.1|//PREDICTED: probable galacturonosyltransferase-like 9 [Solanum pennellii]
Solyc07g056110.3.1	2278	342.493068857952	1879.15191900423	2.45593500816148	3.03583856943764e-06	Up	3.90965493417588e-07	NA	NA	NA	K07300//Ca2+:H+ antiporter	gi|698575337|ref|XP_009775908.1|//PREDICTED: vacuolar cation/proton exchanger 5-like isoform X3 [Nicotiana sylvestris];gi|460395298|ref|XP_004243221.1|//PREDICTED: vacuolar cation/proton exchanger 3-like [Solanum lycopersicum]
Solyc00g084760.1.1	687	1.35627773918888	12.5605164709291	3.21117123745324	0.00453109256012997	Up	0.00119796628630542	NA	NA	NA	NA	gi|698498462|ref|XP_009795135.1|//PREDICTED: uncharacterized protein LOC104241877 [Nicotiana sylvestris]
Solyc12g088650.2.1	1504	645.082324518017	155.900168370623	-2.04886080090699	0.0239407240239324	Down	0.0079368122658735	NA	NA	NA	K14505//cyclin D3, plant	gi|460414803|ref|XP_004252752.1|//PREDICTED: cyclin-D3-3-like [Solanum lycopersicum]
Solyc04g015390.2.1	1468	24.7346103679305	6.34457139437634	-1.96293656197623	0.014260539052836	Down	0.00436352933818141	NA	NA	NA	NA	gi|460382780|ref|XP_004237114.1|//PREDICTED: uncharacterized protein LOC101254376 isoform X1 [Solanum lycopersicum]
Solyc00g011160.2.1	288	351.019755427044	2178.43233183	2.63366616687763	0.0133266977247176	Up	0.00404102750822191	NA	NA	NA	NA	gi|1545805|dbj|BAA10929.1|//cytochrome P450 like_TBP [Nicotiana tabacum]
Solyc07g064310.2.1	2470	661.06374315252	42.0168250259802	-3.97575033555558	2.69688137995662e-20	Down	4.78498410936093e-22	NA	NA	NA	K17508//protein phosphatase PTC7 [EC:3.1.3.16]	gi|460397164|ref|XP_004244138.1|//PREDICTED: probable protein phosphatase 2C 55 [Solanum lycopersicum]
Solyc11g066870.2.1	2675	5835.66446624503	1107.46239811605	-2.39763921935694	7.54771668810596e-10	Down	5.27507409803141e-11	NA	NA	NA	K00889//1-phosphatidylinositol-4-phosphate 5-kinase [EC:2.7.1.68]	gi|460411225|ref|XP_004251014.1|//PREDICTED: uncharacterized protein LOC101247099 [Solanum lycopersicum]
Solyc11g013480.2.1	2517	98.3446448296976	25.5040104468156	-1.94712237004216	7.65283146896204e-06	Down	1.06628462915536e-06	NA	NA	NA	K14486//auxin response factor	gi|1000814571|ref|NP_001234237.2|//auxin response factor 17 [Solanum lycopersicum]
Solyc01g095290.3.1	2077	222.156914303855	74.4360423617189	-1.57750578688881	0.00563262344027384	Down	0.00153013864741001	NA	NA	NA	K11714//rhamnogalacturonan II specific xylosyltransferase [EC:2.4.2.-]	gi|460368211|ref|XP_004229961.1|//PREDICTED: UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4 [Solanum lycopersicum]
Solyc01g106000.3.1	1085	1033.9821157267	2183.00244023712	1.07810251073341	0.00633499798646638	Up	0.00174786249798062	NA	NA	NA	NA	gi|460369540|ref|XP_004230620.1|//PREDICTED: uncharacterized protein LOC101265590 [Solanum lycopersicum]
BGI_novel_G000210	2504	28.3454467078044	0.862157945292157	-5.03902100330967	0.00118537449763629	Down	0.00026780061242633	NA	NA	NA	K00773//queuine tRNA-ribosyltransferase [EC:2.4.2.29]	gi|697115182|ref|XP_009611519.1|//PREDICTED: queuine tRNA-ribosyltransferase-like isoform X2 [Nicotiana tomentosiformis]
Solyc02g083400.3.1	1315	178.254712323917	804.764517374303	2.17462648100431	0.00058907551013071	Up	0.000123752407003753	NA	NA	NA	K19041//E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27]	gi|970006757|ref|XP_015064241.1|//PREDICTED: NEP1-interacting protein-like 1 [Solanum pennellii]
Solyc08g008320.3.1	2025	255.389560865071	549.164409263293	1.1045385734514	0.000305045674166673	Up	5.97060845031013e-05	NA	NA	NA	K03217//YidC/Oxa1 family membrane protein insertase	gi|460398165|ref|XP_004244633.1|//PREDICTED: mitochondrial inner membrane protein OXA1-like [Solanum lycopersicum]
Solyc08g061270.1.1	351	79.0409580792952	282.914532800541	1.83969394775227	0.00251670766271749	Up	0.000618576499476635	NA	NA	NA	NA	gi|723723415|ref|XP_010325222.1|//PREDICTED: uncharacterized protein LOC101264141 [Solanum lycopersicum]
Solyc04g072620.1.1	159	3.33848434196605	31.4582826858236	3.23617473699643	0.000732409312544594	Up	0.000157358255460975	NA	NA	NA	NA	gi|723694165|ref|XP_010320145.1|//PREDICTED: uncharacterized protein LOC104647144 [Solanum lycopersicum]
Solyc08g007120.3.1	1310	195.683524175852	64.6901719633677	-1.59690383859735	0.0147000802501527	Down	0.00452048837273595	NA	NA	NA	K19042//E3 ubiquitin-protein ligase BOI and related proteins [EC:2.3.2.27]	gi|460398310|ref|XP_004244705.1|//PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 2 [Solanum lycopersicum]
Solyc01g108600.3.1	3465	17220.2974391691	3020.52449074314	-2.51123907276875	5.00984546753754e-11	Down	2.88377250167056e-12	NA	GO:0004222//metalloendopeptidase activity;GO:0008270//zinc ion binding	GO:0016485//protein processing	K06972//presequence protease [EC:3.4.24.-]	gi|698526853|ref|XP_009760273.1|//PREDICTED: presequence protease 1, chloroplastic/mitochondrial-like [Nicotiana sylvestris];gi|460369945|ref|XP_004230817.1|//PREDICTED: presequence protease 1, chloroplastic/mitochondrial-like [Solanum lycopersicum]
Solyc08g079470.3.1	2024	205.412218993809	460.118415552375	1.16348319605093	0.00206282867420061	Up	0.000494177720630958	NA	NA	NA	NA	gi|460400381|ref|XP_004245713.1|//PREDICTED: putative transferase CAF17 homolog, mitochondrial isoform X2 [Solanum lycopersicum]
Solyc01g098150.3.1	3014	1180.94439089935	201.661910596816	-2.54993050962285	1.10362464342365e-10	Down	6.68888351799188e-12	NA	NA	NA	K17285//selenium-binding protein 1;K11000//callose synthase [EC:2.4.1.-]	gi|723662253|ref|XP_010312264.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g03800 isoform X2 [Solanum lycopersicum]
Solyc02g071870.3.1	2685	146.918462943454	2476.26410607057	4.07507758052754	3.92671455211006e-25	Up	4.27389536758661e-27	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723675360|ref|XP_010316865.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase RFK1 [Solanum lycopersicum]
Solyc02g021440.3.1	2317	1836.1418133341	3700.00783711086	1.01085083780694	0.00220433251671843	Up	0.000531938598227043	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process;GO:0023052//signaling	K07198//5'-AMP-activated protein kinase, catalytic alpha subunit [EC:2.7.11.11]	gi|460371432|ref|XP_004231541.1|//PREDICTED: CBL-interacting serine/threonine-protein kinase 23 isoform X1 [Solanum lycopersicum];gi|460371434|ref|XP_004231542.1|//PREDICTED: CBL-interacting serine/threonine-protein kinase 23 isoform X2 [Solanum lycopersicum]
BGI_novel_G000498	4805	122.240818104419	7.38925579615346	-4.04815322197834	5.7617526854025e-09	Down	4.6067390450978e-10	NA	NA	NA	NA	gi|971534370|ref|XP_015170882.1|//PREDICTED: uncharacterized protein LOC107063472 [Solanum tuberosum]
Solyc03g116280.3.1	974	124.448171743956	2.27524065217828	-5.77338207853603	1.8085765315427e-11	Down	9.67387551350746e-13	NA	GO:0016706//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	GO:0051553//flavone biosynthetic process	K04124//gibberellin 3-beta-dioxygenase [EC:1.14.11.15];K04125//gibberellin 2-oxidase [EC:1.14.11.13]	gi|565397290|ref|XP_006364232.1|//PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase 5-like isoform X1 [Solanum tuberosum]
Solyc04g014950.3.1	603	12.486000997055	0.702744808328426	-4.15116678544737	0.0124238726929372	Down	0.0037274396639873	NA	NA	NA	K01988//lactosylceramide 4-alpha-galactosyltransferase [EC:2.4.1.228]	gi|970011362|ref|XP_015066589.1|//PREDICTED: uncharacterized protein At4g19900 [Solanum pennellii]
Solyc12g005140.2.1	1732	168.172421046942	628.990223026309	1.90309645778076	7.0554007979371e-06	Up	9.74364841074883e-07	NA	NA	NA	NA	gi|460412158|ref|XP_004251469.1|//PREDICTED: probable folate-biopterin transporter 4 [Solanum lycopersicum]
Solyc08g075490.3.1	1890	7768.44016306648	220.481963676863	-5.13889239938826	3.00123452517541e-16	Down	8.40139827197976e-18	NA	GO:0016702//oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen	GO:0055114//oxidation-reduction process	K09840//9-cis-epoxycarotenoid dioxygenase [EC:1.13.11.51]	gi|970048682|ref|XP_015085832.1|//PREDICTED: probable carotenoid cleavage dioxygenase 4, chloroplastic [Solanum pennellii];gi|460400973|ref|XP_004246004.1|//PREDICTED: probable carotenoid cleavage dioxygenase 4, chloroplastic [Solanum lycopersicum]
Solyc03g121060.3.1	2150	814.744596582463	2720.33835023492	1.7393663180559	1.52693332195351e-05	Up	2.25499844251521e-06	GO:0005634//nucleus	NA	GO:0006355//regulation of transcription, DNA-templated;GO:0009734//auxin-activated signaling pathway	K14484//auxin-responsive protein IAA	gi|525313589|ref|NP_001266088.1|//IAA26 [Solanum lycopersicum]
Solyc06g069045.1.1	731	40.0808489394231	181.395137513945	2.17815081221415	0.000365554034245062	Up	7.2789237026134e-05	NA	GO:0016846//carbon-sulfur lyase activity	NA	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|350538523|ref|NP_001234091.1|//putative glutathione S-transferase T4 [Solanum lycopersicum]
Solyc06g084480.3.1	3958	1973.85652623825	399.200258107905	-2.30583256981196	1.38629641343801e-09	Down	1.00349919296877e-10	NA	NA	NA	K08669//HtrA serine peptidase 2 [EC:3.4.21.108];K14485//transport inhibitor response 1;K11338//RuvB-like protein 2 [EC:3.6.4.12]	gi|723711100|ref|XP_010323029.1|//PREDICTED: protease Do-like 2, chloroplastic [Solanum lycopersicum]
Solyc12g098510.1.1	459	65.288454398919	28.0970894384574	-1.21640719811332	0.0364712106611059	Down	0.0129079374246012	NA	NA	NA	NA	gi|565366475|ref|XP_006349913.1|//PREDICTED: protein RALF-like 33 [Solanum tuberosum]
Solyc05g050980.3.1	2009	999.474362153947	129.320989522407	-2.95021310874392	9.01820561567188e-08	Down	8.73315125596972e-09	GO:0009536//plastid	GO:0016765//transferase activity, transferring alkyl or aryl (other than methyl) groups	GO:0008652//cellular amino acid biosynthetic process;GO:0006950//response to stress	K00800//3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]	gi|460388790|ref|XP_004240047.1|//PREDICTED: 3-phosphoshikimate 1-carboxyvinyltransferase 2 [Solanum lycopersicum]
Solyc01g088650.3.1	1986	249.263392305174	724.811921509914	1.53993566549618	0.00172563909254553	Up	0.000405487879804942	NA	NA	NA	K03849//alpha-1,3-glucosyltransferase [EC:2.4.1.265]	gi|460367711|ref|XP_004229714.1|//PREDICTED: probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase isoform X2 [Solanum lycopersicum];gi|460367709|ref|XP_004229713.1|//PREDICTED: probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase isoform X1 [Solanum lycopersicum]
Solyc06g071500.3.1	2968	701.758711205191	180.945823566751	-1.95541725851688	9.75555104749765e-08	Down	9.47991709438883e-09	GO:0031224//intrinsic component of membrane	GO:0015301//anion:anion antiporter activity	GO:0006811//ion transport	K13862//solute carrier family 4 (sodium borate transporter), member 11;K06573	gi|460391783|ref|XP_004241498.1|//PREDICTED: probable boron transporter 2 [Solanum lycopersicum]
Solyc01g009860.3.1	1154	2141.47610858108	11030.6671594535	2.36484256401849	2.9523229395822e-07	Up	3.12861716014321e-08	NA	GO:0003676//nucleic acid binding	NA	K12581//CCR4-NOT transcription complex subunit 7/8;K13126//polyadenylate-binding protein;K05941//glutathione gamma-glutamylcysteinyltransferase [EC:2.3.2.15];K01054//acylglycerol lipase [EC:3.1.1.23]	gi|350538023|ref|NP_001233811.1|//uncharacterized protein LOC100147720 [Solanum lycopersicum]
Solyc12g036670.1.1	744	141.638505296442	30.6265226592605	-2.20936004673764	0.00397493915395122	Down	0.00103388718563708	NA	NA	GO:0006810//transport	K03319//divalent anion:Na+ symporter, DASS family	gi|723664572|ref|XP_010315125.1|//PREDICTED: LOW QUALITY PROTEIN: dicarboxylate transporter 2.1, chloroplastic-like [Solanum lycopersicum]
Solyc01g107340.3.1	932	323.521656388379	98.0180141536507	-1.72274346564704	0.0064179148883565	Down	0.00177528501515184	NA	NA	NA	NA	gi|969995762|ref|XP_015078002.1|//PREDICTED: classical arabinogalactan protein 9 [Solanum pennellii]
Solyc01g109140.3.1	1531	2.29611762435729	3873.73743545892	10.7203139055107	2.70478437088027e-49	Up	3.93195879172248e-52	NA	GO:0005506//iron ion binding;GO:0016491//oxidoreductase activity	NA	K01723//hydroperoxide dehydratase [EC:4.2.1.92];K17874//9-divinyl ether synthase [EC:4.2.1.121]	gi|350536919|ref|NP_001234527.1|//9-divinyl ether synthase [Solanum lycopersicum]
Solyc09g008000.3.1	3892	59.663145207857	166.071955047427	1.47689652460826	0.000390999060766629	Up	7.84388305146115e-05	NA	NA	NA	K05681//ATP-binding cassette, subfamily G (WHITE), member 2	gi|460402289|ref|XP_004246646.1|//PREDICTED: putative white-brown complex homolog protein 30 [Solanum lycopersicum]
Solyc02g068090.3.1	1659	13572.4790362076	3417.41109924975	-1.98970854243832	4.62466320157235e-07	Down	5.05596286350518e-08	NA	NA	NA	NA	gi|460375002|ref|XP_004233297.1|//PREDICTED: uncharacterized protein LOC101248838 [Solanum lycopersicum]
Solyc03g113680.3.1	2520	635.726863239991	270.548454735701	-1.23252005091474	0.0117809960553535	Down	0.00351244699108633	NA	NA	NA	NA	gi|460380832|ref|XP_004236158.1|//PREDICTED: microtubule-associated protein TORTIFOLIA1 [Solanum lycopersicum]
Solyc06g084045.1.1	757	5471.51232110756	652.090699394201	-3.06879509955682	1.17070703699201e-08	Down	9.7660740598931e-10	GO:0009534//chloroplast thylakoid;GO:0034357//photosynthetic membrane	NA	NA	K02721//photosystem II PsbW protein	gi|460393506|ref|XP_004242350.1|//PREDICTED: photosystem II reaction center W protein, chloroplastic-like [Solanum lycopersicum]
Solyc03g097000.3.1	7014	1854.89011020253	608.349553919591	-1.60836128862672	0.000422940227454315	Down	8.55717740652311e-05	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial;K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30]	gi|565361659|ref|XP_006347572.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g27270 isoform X1 [Solanum tuberosum];gi|697119821|ref|XP_009613872.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g27270 [Nicotiana tomentosiformis];gi|723683650|ref|XP_010318279.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g27270 [Solanum lycopersicum]
Solyc08g066680.3.1	2754	296.653198724765	1939.24162664803	2.70864332816631	7.28304952885202e-13	Up	3.18708071674082e-14	NA	NA	NA	K18789//xylogalacturonan beta-1,3-xylosyltransferase [EC:2.4.2.41]	gi|460399279|ref|XP_004245169.1|//PREDICTED: probable glycosyltransferase At3g07620 [Solanum lycopersicum]
Solyc12g056430.1.1	612	0.755041745567006	36.5393820033192	5.59675201147273	5.1796571359505e-07	Up	5.72063668324935e-08	NA	NA	NA	K09286//EREBP-like factor	gi|460414573|ref|XP_004252643.1|//PREDICTED: dehydration-responsive element-binding protein 1E-like [Solanum lycopersicum]
Solyc03g120920.1.1	555	26.7266672177879	2.23573829402045	-3.57945671906205	0.0433070721151798	Down	0.0157954264442759	NA	NA	NA	NA	gi|723685145|ref|XP_010318531.1|//PREDICTED: uncharacterized protein LOC104646537 [Solanum lycopersicum]
Solyc08g006990.2.1	3360	177.261866222263	9.8264000599301	-4.17307542063434	1.45629527099891e-10	Down	9.01092198396524e-12	NA	NA	GO:0010038//response to metal ion	K03695//ATP-dependent Clp protease ATP-binding subunit ClpB	gi|460398302|ref|XP_004244701.1|//PREDICTED: aluminum-activated malate transporter 12-like [Solanum lycopersicum]
Solyc11g017440.2.1	792	887.684646215628	304.53897536168	-1.54342036572496	5.89914242267573e-05	Down	9.82108727213858e-06	NA	NA	NA	NA	gi|460409921|ref|XP_004250385.1|//PREDICTED: snakin-2-like [Solanum lycopersicum]
Solyc07g043490.1.1	1452	6765.86507511835	497.310089980589	-3.76605679964129	9.76071175529554e-12	Down	5.00987777211941e-13	NA	GO:0016757//transferase activity, transferring glycosyl groups	NA	K18822//soyasapogenol B glucuronide galactosyltransferase [EC:2.4.1.272]	gi|927669089|ref|NP_001233853.2|//UDP-Gal:Tomatidine Galactosyltransferase precursor [Solanum lycopersicum]
Solyc10g081650.2.1	2146	2190.00271810774	1055.74831465228	-1.05266671632971	0.00242254807058147	Down	0.000591821233583978	GO:0009941//chloroplast envelope;GO:0031969//chloroplast membrane	GO:0046608//carotenoid isomerase activity;GO:0016853//isomerase activity;GO:0003824//catalytic activity;GO:0016491//oxidoreductase activity	GO:0055114//oxidation-reduction process;GO:0016117//carotenoid biosynthetic process;GO:0009662//etioplast organization;GO:0016109//tetraterpenoid biosynthetic process	K09835//prolycopene isomerase [EC:5.2.1.13]	gi|970058513|ref|XP_015055959.1|//PREDICTED: prolycopene isomerase, chloroplastic [Solanum pennellii];gi|822606505|ref|NP_001296161.1|//prolycopene isomerase, chloroplastic [Solanum lycopersicum];gi|698503228|ref|XP_009797222.1|//PREDICTED: prolycopene isomerase, chloroplastic [Nicotiana sylvestris]
BGI_novel_G000313	516	25.3344967249714	170.494305771901	2.75054848160177	0.000620021297718602	Up	0.000131016130041999	NA	NA	NA	NA	gi|723720246|ref|XP_010324645.1|//PREDICTED: uncharacterized protein LOC104648617 [Solanum lycopersicum]
Solyc04g072800.3.1	3201	394.884746039093	2577.29671340313	2.70635509393793	6.82002685093299e-10	Up	4.71056722632281e-11	NA	GO:0004619//phosphoglycerate mutase activity	GO:0006007//glucose catabolic process	K01834//2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]	gi|460384371|ref|XP_004237885.1|//PREDICTED: phosphoglycerate mutase [Solanum lycopersicum]
Solyc05g054430.3.1	1084	91.5278732926329	45.2166061684409	-1.01735844759365	0.0434115553091127	Down	0.0158416254091327	GO:0043231//intracellular membrane-bounded organelle	NA	GO:0006259//DNA metabolic process	K10733//GINS complex subunit 2	gi|460388276|ref|XP_004239794.1|//PREDICTED: DNA replication complex GINS protein PSF2 [Solanum lycopersicum]
Solyc11g064953.1.1	1887	572.840522471583	2008.92950544234	1.81022148301388	1.71377311306081e-09	Up	1.25971394772473e-10	NA	GO:0043565//sequence-specific DNA binding;GO:0005488//binding;GO:0003700//transcription factor activity, sequence-specific DNA binding	GO:0006355//regulation of transcription, DNA-templated	K14431//transcription factor TGA	gi|565379886|ref|XP_006356348.1|//PREDICTED: transcription factor HBP-1b(c38)-like [Solanum tuberosum];gi|720091694|ref|XP_010245498.1|//PREDICTED: transcription factor TGA2-like isoform X2 [Nelumbo nucifera]
Solyc03g116910.3.1	1457	227.008048650634	94.2992157182337	-1.26742577244396	0.00595761348052753	Down	0.00163233167396868	NA	GO:0016620//oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor;GO:0016616//oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;GO:0048037//cofactor binding	GO:0008152//metabolic process	K09753//cinnamoyl-CoA reductase [EC:1.2.1.44]	gi|350537525|ref|NP_001234297.1|//cinnamoyl-CoA reductase [Solanum lycopersicum]
Solyc10g048030.2.1	774	214.464554500323	621.174618868043	1.53425965568095	0.0290038039770885	Up	0.00990125591077113	NA	NA	GO:0006950//response to stress	NA	gi|460406666|ref|XP_004248782.1|//PREDICTED: kirola-like [Solanum lycopersicum]
Solyc02g014380.3.1	1751	612.335391368359	1347.03993836192	1.13739865129539	0.00010455980718721	Up	1.83451249601237e-05	NA	NA	NA	NA	gi|460371316|ref|XP_004231486.1|//PREDICTED: protein odr-4 homolog [Solanum lycopersicum]
Solyc09g090430.3.1	854	798.461552506198	2460.39478053626	1.62359497471599	1.32543587416779e-08	Up	1.11408151790978e-09	NA	GO:0003677//DNA binding;GO:0016840//carbon-nitrogen lyase activity;GO:0016835//carbon-oxygen lyase activity	GO:0006082//organic acid metabolic process	K01725//cyanate lyase [EC:4.2.1.104]	gi|460404570|ref|XP_004247754.1|//PREDICTED: cyanate hydratase [Solanum lycopersicum]
Solyc03g111785.1.1	1959	69.8832609021049	267.683381682655	1.93750874221022	3.15961223620038e-08	Up	2.80417352556773e-09	NA	NA	NA	K15360//centromere protein X	gi|460381111|ref|XP_004236296.1|//PREDICTED: centromere protein X [Solanum lycopersicum];gi|565369625|ref|XP_006351435.1|//PREDICTED: centromere protein X [Solanum tuberosum]
Solyc12g098690.2.1	1607	447.258364447143	1106.56352217781	1.30690590294493	0.00226470087985241	Up	0.0005476882103952	NA	NA	NA	K03130//transcription initiation factor TFIID subunit 5;K18643//katanin p80 WD40 repeat-containing subunit B1;K14963//COMPASS component SWD3	gi|698573721|ref|XP_009775476.1|//PREDICTED: uncharacterized WD repeat-containing protein C2A9.03-like [Nicotiana sylvestris];gi|460415247|ref|XP_004252971.1|//PREDICTED: uncharacterized WD repeat-containing protein C2A9.03-like [Solanum lycopersicum]
Solyc03g081240.3.1	3420	60.928480539221	232.745214977365	1.93356284027226	0.0001192335754947	Up	2.12263141703701e-05	NA	NA	NA	K12130//pseudo-response regulator 5	gi|460378531|ref|XP_004235024.1|//PREDICTED: two-component response regulator-like APRR5 [Solanum lycopersicum]
Solyc04g005340.2.1	1405	3080.78383914214	8505.94125829418	1.46517343147451	0.00254551161350535	Up	0.000626225460307712	GO:0043231//intracellular membrane-bounded organelle;GO:0030312//external encapsulating structure;GO:0005911//cell-cell junction	GO:0035251//UDP-glucosyltransferase activity	GO:0045229//external encapsulating structure organization;GO:0009250//glucan biosynthetic process	K13379//reversibly glycosylated polypeptide / UDP-arabinopyranose mutase [EC:2.4.1.- 5.4.99.30]	gi|991820329|ref|NP_001307017.1|//alpha-1,4-glucan-protein synthase [UDP-forming] 2 [Solanum lycopersicum]
Solyc04g007390.3.1	3635	68.8025070393731	359.976391988155	2.38736925446511	0.0205402548730517	Up	0.00664105303298234	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723690384|ref|XP_010319415.1|//PREDICTED: probable serine/threonine-protein kinase At1g18390 [Solanum lycopersicum]
Solyc03g112650.3.1	669	60.0305569772727	229.422189738333	1.93423597692344	0.0116094455231343	Up	0.00345366724020183	NA	NA	NA	NA	gi|460380981|ref|XP_004236231.1|//PREDICTED: heme-binding protein 2-like [Solanum lycopersicum]
Solyc07g053150.3.1	870	157.210503677017	65.7955816290367	-1.25663500032025	0.000528519730991981	Down	0.000109415483298399	GO:0043231//intracellular membrane-bounded organelle	GO:0016724//oxidoreductase activity, oxidizing metal ions, oxygen as acceptor	GO:0006875//cellular metal ion homeostasis;GO:0008152//metabolic process	K19054//frataxin [EC:1.16.3.1]	gi|460395708|ref|XP_004243423.1|//PREDICTED: frataxin, mitochondrial isoform X2 [Solanum lycopersicum]
Solyc02g093170.3.1	5227	3061.65702979109	499.51938025813	-2.61570012196924	1.11560165723647e-15	Down	3.32252021817481e-17	NA	NA	NA	K10352//myosin heavy chain;K20478//golgin subfamily B member 1	gi|460372076|ref|XP_004231859.1|//PREDICTED: filament-like plant protein 7 [Solanum lycopersicum]
Solyc01g097550.3.1	2675	0.375898025232507	4.31694794717551	3.52159845583539	0.0408207356616318	Up	0.0147136019773364	NA	NA	NA	K17099//annexin A13	gi|460368509|ref|XP_004230108.1|//PREDICTED: annexin D4-like [Solanum lycopersicum]
Solyc06g053500.3.1	1648	140.157854963955	301.344374086107	1.10436053022001	0.000139253490689832	Up	2.52159481799315e-05	NA	NA	NA	NA	gi|460390781|ref|XP_004241003.1|//PREDICTED: uncharacterized protein LOC101247433 [Solanum lycopersicum]
Solyc04g079400.3.1	2762	628.495407307696	5072.78893263918	3.01280502702563	6.00588377963997e-13	Up	2.59237118563556e-14	NA	NA	NA	K04421//mitogen-activated protein kinase kinase kinase 3 [EC:2.7.11.25];K11229//mitogen-activated protein kinase kinase kinase [EC:2.7.11.1]	gi|460384986|ref|XP_004238187.1|//PREDICTED: mitogen-activated protein kinase kinase kinase YODA isoform X2 [Solanum lycopersicum];gi|723695504|ref|XP_010320358.1|//PREDICTED: mitogen-activated protein kinase kinase kinase YODA isoform X1 [Solanum lycopersicum]
Solyc04g074290.3.1	2892	1446.76219257212	5341.92746752312	1.88453258479497	6.84807882266668e-06	Up	9.43180678759258e-07	NA	NA	NA	K16302//metal transporter CNNM;K15449//tRNA wybutosine-synthesizing protein 1 [EC:4.1.3.44]	gi|723694361|ref|XP_010320179.1|//PREDICTED: probable pectin methyltransferase QUA2 [Solanum lycopersicum]
Solyc01g095995.1.1	6678	2351.78714369659	5561.59823409877	1.24174203900644	0.00470004843251798	Up	0.00124614002163786	NA	NA	NA	K08770//ubiquitin C;K14544//U3 small nucleolar RNA-associated protein 22	gi|460368259|ref|XP_004229985.1|//PREDICTED: phosphatidylinositol 4-kinase gamma 4-like [Solanum lycopersicum];gi|460368261|ref|XP_004229986.1|//PREDICTED: uncharacterized protein LOC101253024 [Solanum lycopersicum]
Solyc03g034165.1.1	1203	10.9589240853151	2.27938378318102	-2.26539040688637	0.0390882491538712	Down	0.0139900614423539	NA	NA	NA	NA	NA
Solyc02g085315.1.1	3312	1409.33638077411	7379.34578959673	2.388476925325	8.16625594817158e-06	Up	1.1460397213682e-06	GO:0005622//intracellular	GO:0005215//transporter activity	GO:0006810//transport	K14399//polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78];K19996//phosphatidylinositol transfer protein SFH5;K00133//aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]	gi|697106798|ref|XP_009607220.1|//PREDICTED: random slug protein 5-like [Nicotiana tomentosiformis];gi|460373188|ref|XP_004232403.1|//PREDICTED: random slug protein 5-like [Solanum lycopersicum]
Solyc10g044710.2.1	1279	1422.61452463665	341.373202048568	-2.05912308267683	2.71342535922424e-07	Down	2.84713448121971e-08	NA	NA	NA	NA	gi|460406792|ref|XP_004248842.1|//PREDICTED: uncharacterized protein LOC101260882 [Solanum lycopersicum]
Solyc12g014050.2.1	1796	962.081793224174	288.15856532978	-1.73929664913534	1.09032117924571e-06	Down	1.29116981752782e-07	NA	GO:0046914//transition metal ion binding;GO:0016655//oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	GO:0008152//metabolic process	K18980//2-methylene-furan-3-one reductase [EC:1.3.1.105]	gi|460412983|ref|XP_004251875.1|//PREDICTED: reticulon-4-interacting protein 1, mitochondrial [Solanum lycopersicum]
Solyc06g082910.3.1	3018	1219.95749550592	192.090057655633	-2.66697612984582	2.05109400512149e-05	Down	3.11930205043077e-06	NA	NA	NA	K19984//exocyst complex component 5;K02184//formin 2	gi|460393702|ref|XP_004242448.1|//PREDICTED: formin-like protein 1 [Solanum lycopersicum]
Solyc08g075210.2.1	1319	2131.30779365443	313.610941488129	-2.76469115629424	0.000153439032906487	Down	2.81506977771631e-05	NA	NA	NA	K13065//shikimate O-hydroxycinnamoyltransferase [EC:2.3.1.133]	gi|460401403|ref|XP_004246214.1|//PREDICTED: deacetylvindoline O-acetyltransferase-like [Solanum lycopersicum]
Solyc09g007150.3.1	1056	1807.3787445926	280.433621851161	-2.68816762835945	0.000178234600029294	Down	3.31449388529204e-05	NA	NA	NA	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|460402424|ref|XP_004246712.1|//PREDICTED: glutathione S-transferase L3 [Solanum lycopersicum]
Solyc06g036305.1.1	987	332.590231145639	129.368380015681	-1.36226075483057	0.0310841367896352	Down	0.0107352174000359	NA	NA	NA	K12133//MYB-related transcription factor LHY	gi|460390177|ref|XP_004240716.1|//PREDICTED: protein REVEILLE 6 isoform X1 [Solanum lycopersicum]
Solyc04g081290.3.1	1146	1454.05795148797	4723.60148857581	1.69980248641817	0.00245283393771682	Up	0.000600199289607279	NA	GO:0003824//catalytic activity	NA	K06966//uncharacterized protein	gi|460385304|ref|XP_004238344.1|//PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG1 [Solanum lycopersicum]
Solyc03g007950.3.1	2634	8.17178225730371	41.6814144959193	2.35068156948284	0.000484978665068025	Up	9.95518677698529e-05	NA	GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds	GO:0044238//primary metabolic process;GO:0045229//external encapsulating structure organization	K01184//polygalacturonase [EC:3.2.1.15]	gi|970015002|ref|XP_015068509.1|//PREDICTED: probable polygalacturonase [Solanum pennellii];gi|723679384|ref|XP_010317519.1|//PREDICTED: probable polygalacturonase, partial [Solanum lycopersicum]
Solyc01g057460.3.1	1006	163.060335365938	1093.22865896699	2.74511739325649	5.71895783025755e-17	Up	1.4666180808175e-18	NA	NA	NA	K14972//PAX-interacting protein 1	gi|723657219|ref|XP_010319382.1|//PREDICTED: mediator of RNA polymerase II transcription subunit 15a [Solanum lycopersicum]
Solyc11g066680.1.1	1395	1219.50006057639	185.810963218057	-2.71438229856306	5.29487799785192e-08	Down	4.90668453391463e-09	NA	NA	NA	K13495//cis-zeatin O-glucosyltransferase [EC:2.4.1.215]	gi|460411200|ref|XP_004251002.1|//PREDICTED: zeatin O-glucosyltransferase-like [Solanum lycopersicum]
Solyc08g007920.2.1	1585	1.89480133819792	135.987575120123	6.16528443552876	4.23185170623347e-14	Up	1.56478190419845e-15	NA	NA	NA	K14411//RNA-binding protein Musashi	gi|460398341|ref|XP_004244720.1|//PREDICTED: protein IQ-DOMAIN 31-like [Solanum lycopersicum]
Solyc03g098630.3.1	8771	653.612433008564	204.908151091112	-1.67345805186684	0.000935356979807419	Down	0.000206787500859252	NA	NA	NA	K18643//katanin p80 WD40 repeat-containing subunit B1	gi|723684095|ref|XP_010318349.1|//PREDICTED: uncharacterized protein LOC101260214 isoform X1 [Solanum lycopersicum]
Solyc04g074670.3.1	6447	405.2009046934	837.355934315742	1.04720360329263	0.00909054953116804	Up	0.00262418849611211	NA	NA	NA	K13121//protein FRA10AC1	gi|697155523|ref|XP_009632006.1|//PREDICTED: uncharacterized protein At1g04910 isoform X1 [Nicotiana tomentosiformis];gi|460384490|ref|XP_004237944.1|//PREDICTED: uncharacterized protein At1g04910 [Solanum lycopersicum];gi|698518613|ref|XP_009804174.1|//PREDICTED: uncharacterized protein At1g04910-like [Nicotiana sylvestris];gi|697155525|ref|XP_009632007.1|//PREDICTED: uncharacterized protein At1g04910 isoform X2 [Nicotiana tomentosiformis]
Solyc11g017280.2.1	2837	189.255411538808	1469.20580400541	2.9566300423663	0.000231052063204396	Up	4.39832595342496e-05	NA	NA	NA	K00924;K20718//null;K17422//large subunit ribosomal protein L41	gi|723742659|ref|XP_004250590.2|//PREDICTED: leucine-rich repeat receptor-like tyrosine-protein kinase At2g41820 [Solanum lycopersicum]
Solyc04g015030.3.1	936	3291.88681027384	407.511813512545	-3.01400094244374	0.00367809771226001	Down	0.000949000759067533	NA	NA	NA	K17046//protein DEK;K00430//peroxidase [EC:1.11.1.7];K07213//copper chaperone;K10752//histone-binding protein RBBP4	gi|460381852|ref|XP_004236655.1|//PREDICTED: golgin subfamily A member 6-like protein 22 [Solanum lycopersicum]
Solyc07g006500.3.1	3357	534.265463152794	1646.83380710975	1.62406630623797	0.0263354202213847	Up	0.00886616652152775	NA	NA	GO:0005991//trehalose metabolic process	K16055//trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12]	gi|350534654|ref|NP_001233896.1|//trehalose-6-phosphate synthase [Solanum lycopersicum];gi|697141999|ref|XP_009625114.1|//PREDICTED: probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 11 isoform X1 [Nicotiana tomentosiformis]
Solyc09g013150.3.1	3123	85.0994293091914	749.296569385467	3.13831548407902	8.07658032646033e-20	Up	1.55040959748288e-21	NA	NA	GO:0006810//transport	K08193//MFS transporter, ACS family, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), other;K12303//MFS transporter, ACS family, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), member 9	gi|460401674|ref|XP_004246342.1|//PREDICTED: probable anion transporter 3, chloroplastic [Solanum lycopersicum]
Solyc08g078170.1.1	714	0.444257910911906	25.1408531920297	5.82249233376357	2.40749037890971e-05	Up	3.71246000355951e-06	NA	NA	NA	K09286//EREBP-like factor	gi|723725195|ref|XP_010325512.1|//PREDICTED: ethylene-responsive transcription factor 1A-like [Solanum lycopersicum]
Solyc03g114910.3.1	7273	161.797936577289	585.961782245889	1.85661336280514	8.8035154665831e-09	Up	7.20281662783283e-10	NA	NA	NA	NA	gi|460380649|ref|XP_004236067.1|//PREDICTED: COBRA-like protein 1 [Solanum lycopersicum]
Solyc09g010220.3.1	1533	197.28110425293	74.0887934483777	-1.41292553573979	0.00980631065937273	Down	0.0028613314388538	NA	GO:0008238//exopeptidase activity	GO:0019538//protein metabolic process	K01285//lysosomal Pro-X carboxypeptidase [EC:3.4.16.2]	gi|460401954|ref|XP_004246480.1|//PREDICTED: lysosomal Pro-X carboxypeptidase-like [Solanum lycopersicum]
Solyc01g087990.3.1	2361	158.276790733213	2135.92824548091	3.75434155852073	7.43920893525176e-10	Up	5.18537375462979e-11	GO:0043231//intracellular membrane-bounded organelle	GO:0003677//DNA binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0006351//transcription, DNA-templated	K09264//MADS-box transcription factor, plant;K04454//MADS-box transcription enhancer factor 2C	gi|460367628|ref|XP_004229674.1|//PREDICTED: agamous-like MADS-box protein AGL15 isoform X2 [Solanum lycopersicum]
Solyc03g115820.3.1	5522	13229.5505115454	5381.39397924673	-1.29771220784871	0.000125759134400645	Down	2.25286417149806e-05	GO:0009534//chloroplast thylakoid	GO:0016857//racemase and epimerase activity, acting on carbohydrates and derivatives	GO:0015977//carbon fixation;GO:0006007//glucose catabolic process	K01783//ribulose-phosphate 3-epimerase [EC:5.1.3.1]	gi|460380509|ref|XP_004235998.1|//PREDICTED: ribulose-phosphate 3-epimerase, chloroplastic [Solanum lycopersicum]
Solyc04g078460.3.1	1359	515.620007726421	2906.40896477266	2.49485756970411	3.28636359238614e-06	Up	4.26291385921566e-07	NA	GO:0016811//hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	NA	K13051//beta-aspartyl-peptidase (threonine type) [EC:3.4.19.5]	gi|460384861|ref|XP_004238125.1|//PREDICTED: probable isoaspartyl peptidase/L-asparaginase 2 [Solanum lycopersicum]
Solyc08g062210.3.1	2819	692.807498787794	1470.61353816043	1.08589172058973	0.00546495710308049	Up	0.00147807248918861	NA	NA	NA	K08064//nuclear transcription factor Y, alpha;K13691//pathogen-inducible salicylic acid glucosyltransferase [EC:2.4.1.-]	gi|460399055|ref|XP_004245059.1|//PREDICTED: nuclear transcription factor Y subunit A-8-like [Solanum lycopersicum]
Solyc07g049180.3.1	2552	726.637750789927	5977.06070785993	3.04012797130545	2.10216942123015e-12	Up	9.81816864768668e-14	GO:0016021//integral component of membrane	GO:0004674//protein serine/threonine kinase activity;GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity;GO:0004871//signal transducer activity	GO:0006464//cellular protein modification process;GO:0006468//protein phosphorylation;GO:0009056//catabolic process	K13429//chitin elicitor receptor kinase 1	gi|970040448|ref|XP_015081611.1|//PREDICTED: chitin elicitor receptor kinase 1-like isoform X2 [Solanum pennellii];gi|987996520|ref|NP_001233930.2|//LysM receptor-like kinase isoform 1a precursor [Solanum lycopersicum];gi|350539825|ref|NP_001233773.1|//LysM receptor-like kinase isoform 1 precursor [Solanum lycopersicum]
Solyc09g074310.3.1	1458	310.716664539481	88.9931366248325	-1.80383363780498	4.70555092893651e-05	Down	7.6438016058988e-06	NA	NA	NA	K14521//N-acetyltransferase 10 [EC:2.3.1.-];K05275//pyridoxine 4-dehydrogenase [EC:1.1.1.65];K09338//homeobox-leucine zipper protein	gi|460404010|ref|XP_004247478.1|//PREDICTED: aldo-keto reductase-like [Solanum lycopersicum]
Solyc03g111610.3.1	1317	11558.6278030559	3292.12108319012	-1.8118808329363	1.15782792611488e-12	Down	5.21341931842393e-14	GO:0009532//plastid stroma;GO:0009526//plastid envelope	GO:0003824//catalytic activity	NA	K20884;K17623//pseudouridine 5'-phosphatase [EC:3.1.3.96]	gi|460381143|ref|XP_004236312.1|//PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein At3g48420 [Solanum lycopersicum]
Solyc02g092870.2.1	5816	13.5917499164066	330.885471710745	4.60552883029853	4.74331171693804e-12	Up	2.32674750987418e-13	NA	NA	NA	K00517;K13260//isoflavone 2'-hydroxylase [EC:1.14.13.89]	gi|460372134|ref|XP_004231887.1|//PREDICTED: cytochrome P450 81D1-like [Solanum lycopersicum];gi|460375625|ref|XP_004233605.1|//PREDICTED: uncharacterized protein LOC101268546 [Solanum lycopersicum]
Solyc08g080770.3.1	1998	73.8748063858324	238.65397073883	1.69176599090237	0.0126394455149233	Up	0.00380436568260794	NA	NA	NA	K03239//translation initiation factor eIF-2B subunit alpha	gi|723724419|ref|XP_004245620.2|//PREDICTED: protein LURP-one-related 11-like [Solanum lycopersicum];gi|970045863|ref|XP_015084418.1|//PREDICTED: protein LURP-one-related 11-like [Solanum pennellii]
Solyc06g068480.3.1	1501	4877.01436008847	1487.00853237273	-1.71358529479421	5.11620453462112e-11	Down	2.95209654823076e-12	NA	NA	NA	NA	gi|460392146|ref|XP_004241678.1|//PREDICTED: protein LOW PSII ACCUMULATION 3, chloroplastic [Solanum lycopersicum]
BGI_novel_G000478	1262	6729.56243910421	222.300862563769	-4.91992725145455	7.61964958178126e-15	Down	2.51072395642412e-16	NA	NA	NA	K02259//cytochrome c oxidase assembly protein subunit 15	gi|723747778|ref|XP_010313765.1|//PREDICTED: uncharacterized protein LOC101247889 [Solanum lycopersicum]
Solyc01g098200.3.1	1713	209.363075926843	71.4034844068988	-1.55194064256243	0.00188125187211982	Down	0.000446611494465898	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K17302//coatomer subunit beta'	gi|460368589|ref|XP_004230148.1|//PREDICTED: vesicle-associated protein 1-2-like [Solanum lycopersicum]
Solyc07g047770.3.1	5590	1696.21133507949	433.27127843633	-1.96897342136743	2.93552681904904e-07	Down	3.10753547267753e-08	NA	GO:0004871//signal transducer activity;GO:0004673//protein histidine kinase activity	GO:0044260//cellular macromolecule metabolic process;GO:0016310//phosphorylation;GO:0007165//signal transduction;GO:0044238//primary metabolic process	K14489//arabidopsis histidine kinase 2/3/4 (cytokinin receptor) [EC:2.7.13.3]	gi|460395981|ref|XP_004243558.1|//PREDICTED: histidine kinase 2 [Solanum lycopersicum]
Solyc02g087350.2.1	879	0.762832691680816	4523.57050574558	12.5338076648798	1.76312263163637e-38	Up	6.11191310355533e-41	NA	GO:0008194//UDP-glycosyltransferase activity	NA	K20893	gi|460372895|ref|XP_004232258.1|//PREDICTED: probable galacturonosyltransferase-like 10 [Solanum lycopersicum]
Solyc12g005620.1.1	1734	1.39841953432876	13.2458065043906	3.24366654050227	0.0329024541870892	Up	0.0114707266293367	NA	NA	GO:0000272//polysaccharide catabolic process	K13465	gi|723747088|ref|XP_010313664.1|//PREDICTED: receptor-like protein 12 [Solanum lycopersicum]
Solyc02g083290.3.1	3125	1871.70889116069	761.992839496028	-1.29650672272065	9.25872979725495e-07	Down	1.07675700639017e-07	NA	GO:0005524//ATP binding;GO:0016597//amino acid binding;GO:0004672//protein kinase activity	GO:0006468//protein phosphorylation	K04424//sterile alpha motif and leucine zipper containing kinase AZK [EC:2.7.11.25];K17535//serine/threonine-protein kinase TNNI3K [EC:2.7.11.1];K04365//B-Raf proto-oncogene serine/threonine-protein kinase [EC:2.7.11.1]	gi|525314379|ref|NP_001266007.1|//Hop-interacting protein THI135 [Solanum lycopersicum]
Solyc07g045210.1.1	2319	1759.53907322992	543.594097031884	-1.6945958568059	0.000181270006495044	Down	3.37499508887261e-05	NA	NA	NA	K12598//ATP-dependent RNA helicase DOB1 [EC:3.6.4.13]	gi|460396049|ref|XP_004243592.1|//PREDICTED: uncharacterized protein LOC101266139 [Solanum lycopersicum]
Solyc10g087013.1.1	1743	199.227040770387	2.46876903006656	-6.33447779620352	5.04643503779983e-21	Down	8.35178603244045e-23	NA	GO:0005506//iron ion binding;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30];K15472//premnaspirodiene oxygenase [EC:1.14.13.121]	gi|723739404|ref|XP_004249520.2|//PREDICTED: premnaspirodiene oxygenase-like [Solanum lycopersicum]
Solyc10g078510.2.1	2987	264.798214269017	1156.7785971771	2.12714746664699	6.05022947181172e-06	Up	8.2325339055459e-07	GO:0005634//nucleus	GO:0008422//beta-glucosidase activity;GO:0008270//zinc ion binding;GO:0035064//methylated histone binding;GO:0043167//ion binding	GO:0044238//primary metabolic process;GO:0016568//chromatin modification	K15429//tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228];K19893//glucan endo-1,3-beta-glucosidase 5/6 [EC:3.2.1.39];K11346//inhibitor of growth protein 4	gi|460407405|ref|XP_004249143.1|//PREDICTED: glucan endo-1,3-beta-glucosidase 8-like [Solanum lycopersicum];gi|697103962|ref|XP_009605785.1|//PREDICTED: glucan endo-1,3-beta-glucosidase 8-like [Nicotiana tomentosiformis];gi|565393176|ref|XP_006362258.1|//PREDICTED: PHD finger protein ING2 [Solanum tuberosum]
Solyc08g080585.1.1	714	983.171971637008	105.25611193425	-3.22353977872986	0.000166642009463561	Down	3.08214421857086e-05	NA	NA	GO:0006952//defense response;GO:0001906//cell killing	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460400217|ref|XP_004245632.1|//PREDICTED: thaumatin-like protein [Solanum lycopersicum]
Solyc06g049050.3.1	1188	867.700799817642	46.9558227891076	-4.20782168251597	6.3039567010314e-11	Down	3.71028314854949e-12	GO:0044464//cell part	NA	NA	K20628	gi|350534896|ref|NP_001234165.1|//expansin precursor [Solanum lycopersicum]
Solyc01g108087.1.1	1510	221.231079927777	784.810134374941	1.82678959277584	0.000265653241210063	Up	5.13423309853205e-05	NA	NA	NA	K14432//ABA responsive element binding factor	gi|460369867|ref|XP_004230778.1|//PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 7 [Solanum lycopersicum]
Solyc04g082010.1.1	1184	72387.7628031635	4326.09056616086	-4.06461005604918	1.57658809396793e-11	Down	8.35659858961682e-13	GO:0009535//chloroplast thylakoid membrane;GO:0009579//thylakoid;GO:0009507//chloroplast	GO:0009055//electron carrier activity;GO:0046872//metal ion binding;GO:0005507//copper ion binding	GO:0055114//oxidation-reduction process	K02638//plastocyanin	gi|822885228|ref|NP_001296192.1|//plastocyanin, chloroplastic [Solanum lycopersicum]
Solyc01g094080.3.1	2070	506.847983964509	244.077398323639	-1.05421440568174	0.00263030529013662	Down	0.000649634816327914	NA	GO:0005506//iron ion binding;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K20495	gi|460370679|ref|XP_004231178.1|//PREDICTED: cytochrome P450 704C1-like isoform X1 [Solanum lycopersicum]
Solyc03g117980.3.1	3724	2468.8969612733	23553.8791795821	3.25402615006546	2.5394834454338e-11	Up	1.40377737795524e-12	GO:0031224//intrinsic component of membrane;GO:0016021//integral component of membrane	GO:0016209//antioxidant activity;GO:0016651//oxidoreductase activity, acting on NAD(P)H;GO:0050664//oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor;GO:0005509//calcium ion binding;GO:0004601//peroxidase activity;GO:0046914//transition metal ion binding;GO:0050662//coenzyme binding	GO:0008152//metabolic process;GO:0098869//cellular oxidant detoxification;GO:0055114//oxidation-reduction process	K13447//respiratory burst oxidase [EC:1.6.3.- 1.11.1.-]	gi|908212423|ref|NP_001234271.2|//whitefly-induced gp91-phox [Solanum lycopersicum]
Solyc01g094940.3.1	2255	711.941690747404	178.047553647488	-1.99949647344114	5.78184933879195e-06	Down	7.83829806365973e-07	GO:0016021//integral component of membrane	GO:0004674//protein serine/threonine kinase activity;GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0004702//receptor signaling protein serine/threonine kinase activity	GO:0006464//cellular protein modification process;GO:0006468//protein phosphorylation	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460368073|ref|XP_004229894.1|//PREDICTED: probable serine/threonine-protein kinase At1g01540 [Solanum lycopersicum]
Solyc04g007880.3.1	2212	1217.28467936968	11735.3976346276	3.26912821861772	1.99955447696838e-09	Up	1.48393952722679e-10	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004702//receptor signaling protein serine/threonine kinase activity	GO:0006464//cellular protein modification process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460382430|ref|XP_004236942.1|//PREDICTED: putative receptor-like protein kinase At4g00960 [Solanum lycopersicum];gi|970020775|ref|XP_015071633.1|//PREDICTED: putative receptor-like protein kinase At4g00960 [Solanum pennellii]
Solyc08g068390.3.1	2667	340.414213317415	2298.53664390718	2.75535248592974	7.4170476449981e-10	Up	5.16716193846036e-11	NA	GO:0003824//catalytic activity;GO:0005488//binding	GO:0008152//metabolic process	K10527//enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [EC:4.2.1.17 1.1.1.35 1.1.1.211]	gi|723723167|ref|XP_010325170.1|//PREDICTED: peroxisomal fatty acid beta-oxidation multifunctional protein AIM1-like [Solanum lycopersicum]
Solyc03g096190.2.1	4321	8.57624366005697	43.0404456689204	2.32727521661336	0.0181061582832964	Up	0.00573730623103856	NA	GO:0003824//catalytic activity	NA	K13428//LRR receptor-like serine/threonine-protein kinase EFR [EC:2.7.11.1];K20181//vacuolar protein sorting-associated protein 18	gi|723683498|ref|XP_004235251.2|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 isoform X1 [Solanum lycopersicum]
Solyc01g105650.3.1	1231	286.997370385199	1452.15407950568	2.33908511394427	0.0249164567319326	Up	0.00831837070046887	NA	NA	NA	K05278//flavonol synthase [EC:1.14.11.23]	gi|460369556|ref|XP_004230628.1|//PREDICTED: probable 2-oxoglutarate/Fe(II)-dependent dioxygenase [Solanum lycopersicum]
Solyc07g064330.3.1	2339	2253.9552731565	706.670260754562	-1.67334978580928	0.00037750022405906	Down	7.53790331103468e-05	NA	NA	NA	K02335//DNA polymerase I [EC:2.7.7.7]	gi|460397158|ref|XP_004244135.1|//PREDICTED: DNA polymerase I B, chloroplastic/mitochondrial [Solanum lycopersicum]
Solyc05g054640.3.1	3644	3027.55288140939	8055.38607002943	1.41180157526621	0.000324116129193771	Up	6.38615572878437e-05	GO:0045252//oxoglutarate dehydrogenase complex;GO:0005829//cytosol;GO:0005739//mitochondrion	GO:0019842//vitamin binding;GO:0004591//oxoglutarate dehydrogenase (succinyl-transferring) activity;GO:0016624//oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor;GO:0030976//thiamine pyrophosphate binding	GO:0006099//tricarboxylic acid cycle;GO:0006007//glucose catabolic process	K00164//2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]	gi|723701438|ref|XP_010321375.1|//PREDICTED: LOW QUALITY PROTEIN: 2-oxoglutarate dehydrogenase, mitochondrial [Solanum lycopersicum];gi|970024465|ref|XP_015073544.1|//PREDICTED: 2-oxoglutarate dehydrogenase, mitochondrial-like [Solanum pennellii]
Solyc04g071700.3.1	1288	1197.58297323328	344.504851217806	-1.79752941118037	1.92876781262408e-13	Down	7.7573448256351e-15	NA	NA	NA	K01934//5-formyltetrahydrofolate cyclo-ligase [EC:6.3.3.2]	gi|460384221|ref|XP_004237811.1|//PREDICTED: 5-formyltetrahydrofolate cyclo-ligase-like protein COG0212 [Solanum lycopersicum]
Solyc12g098490.2.1	1803	580.861532174064	83.9733201675341	-2.7901913541988	4.28221608500149e-07	Down	4.66880947093685e-08	NA	GO:0016742//hydroxymethyl-, formyl- and related transferase activity;GO:0048037//cofactor binding	GO:0009069//serine family amino acid metabolic process;GO:0006730//one-carbon metabolic process	K00600//glycine hydroxymethyltransferase [EC:2.1.2.1]	gi|460415278|ref|XP_004252986.1|//PREDICTED: serine hydroxymethyltransferase 4 [Solanum lycopersicum]
Solyc02g084740.3.1	2014	235.990764542574	600.735845995768	1.34800035118394	0.00356579994864216	Up	0.000916171874384613	GO:0016021//integral component of membrane	GO:0008395//steroid hydroxylase activity;GO:0016709//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen;GO:0020037//heme binding;GO:0005506//iron ion binding	GO:0010268//brassinosteroid homeostasis;GO:0016132//brassinosteroid biosynthetic process;GO:0048443//stamen development;GO:0016125//sterol metabolic process;GO:0009965//leaf morphogenesis;GO:0055114//oxidation-reduction process;GO:0048441//petal development;GO:0042814//monopolar cell growth	K12637//3-epi-6-deoxocathasterone 23-monooxygenase [EC:1.14.13.112]	gi|460373274|ref|XP_004232446.1|//PREDICTED: 3-epi-6-deoxocathasterone 23-monooxygenase [Solanum lycopersicum]
Solyc01g109910.3.1	2166	772.162642939041	2292.4223731723	1.5698962177831	2.70120397319702e-08	Up	2.37014840946242e-09	NA	NA	NA	NA	gi|460370138|ref|XP_004230911.1|//PREDICTED: uncharacterized protein LOC101253631 [Solanum lycopersicum]
Solyc01g106460.3.1	2790	10.1283417054021	38.3281756344463	1.9200073458904	0.0248851603996547	Up	0.00830463847689387	NA	NA	NA	K01681//aconitate hydratase [EC:4.2.1.3];K13422//transcription factor MYC2	gi|460369626|ref|XP_004230658.1|//PREDICTED: transcription factor bHLH18-like [Solanum lycopersicum]
Solyc04g007710.3.1	2355	2648.63898556757	6631.14686580529	1.32400719288948	5.94777631363663e-06	Up	8.08097683882716e-07	GO:0005622//intracellular	GO:0005524//ATP binding;GO:0004707//MAP kinase activity	GO:0000165//MAPK cascade	K04371//mitogen-activated protein kinase 1/3 [EC:2.7.11.24];K20538	gi|723688485|ref|XP_010319115.1|//PREDICTED: mitogen-activated protein kinase 14 isoform X1 [Solanum lycopersicum];gi|350539607|ref|NP_001233960.1|//mitogen-activated protein kinase 14 [Solanum lycopersicum]
Solyc03g036470.2.1	2253	0.378131272930622	6.13832308992436	4.02088550801213	0.0135581338217591	Up	0.00412434509167199	GO:0044424//intracellular part;GO:0005737//cytoplasm	GO:0016840//carbon-nitrogen lyase activity;GO:0045548//phenylalanine ammonia-lyase activity	GO:0006558//L-phenylalanine metabolic process;GO:0009800//cinnamic acid biosynthetic process;GO:0006559//L-phenylalanine catabolic process	K10775//phenylalanine ammonia-lyase [EC:4.3.1.24]	gi|723680539|ref|XP_004234632.2|//PREDICTED: phenylalanine ammonia-lyase [Solanum lycopersicum]
Solyc02g078660.3.1	3323	74.1982515783896	1978.35072968161	4.73676921380375	4.51259482021177e-12	Up	2.21020933120556e-13	NA	NA	NA	K05747//Wiskott-Aldrich syndrome protein;K02184//formin 2	gi|723674524|ref|XP_010316723.1|//PREDICTED: uncharacterized protein At4g04980 isoform X2 [Solanum lycopersicum];gi|723674521|ref|XP_010316722.1|//PREDICTED: uncharacterized protein At4g04980 isoform X1 [Solanum lycopersicum];gi|970006614|ref|XP_015064164.1|//PREDICTED: uncharacterized protein At4g04980-like [Solanum pennellii]
Solyc03g096760.1.1	339	171.642516562269	38.8147888925532	-2.14472861253883	0.0105149060449424	Down	0.00309082112235037	NA	NA	NA	NA	gi|460379027|ref|XP_004235266.1|//PREDICTED: uncharacterized protein LOC101268660 [Solanum lycopersicum]
Solyc06g075190.1.1	288	185.581826384135	2022.09787003706	3.44572548315179	4.82094838165095e-10	Up	3.25074385806119e-11	NA	NA	NA	K07442//tRNA (adenine57-N1/adenine58-N1)-methyltransferase [EC:2.1.1.219 2.1.1.220]	gi|460391324|ref|XP_004241273.1|//PREDICTED: uncharacterized protein LOC101262017 [Solanum lycopersicum]
Solyc06g054630.2.1	579	2.66600863212321	159.219217379706	5.90018921435778	2.21373736578347e-14	Up	7.81425855597491e-16	GO:0043231//intracellular membrane-bounded organelle	GO:0001071//nucleic acid binding transcription factor activity;GO:0003676//nucleic acid binding	GO:0006351//transcription, DNA-templated	K09286//EREBP-like factor	gi|460390925|ref|XP_004241075.1|//PREDICTED: ethylene-responsive transcription factor ERF016-like [Solanum lycopersicum]
Solyc09g008340.3.1	1039	1413.27298320822	4780.76929845554	1.75820262958421	1.03581283672248e-06	Up	1.22198733719496e-07	NA	NA	NA	NA	gi|970049452|ref|XP_015086237.1|//PREDICTED: uncharacterized protein LOC107029357 [Solanum pennellii]
Solyc06g051200.3.1	3604	12211.3971446908	3490.31087046868	-1.80680082973004	1.13862618603983e-06	Down	1.35473937149215e-07	GO:0030529//intracellular ribonucleoprotein complex;GO:0009536//plastid	GO:0003723//RNA binding;GO:0005198//structural molecule activity	GO:0010467//gene expression	K11723//bromodomain-containing protein 7/9;K02906//large subunit ribosomal protein L3	gi|460390606|ref|XP_004240919.1|//PREDICTED: 50S ribosomal protein L3, chloroplastic [Solanum lycopersicum]
Solyc01g005830.3.1	2553	699.631204182996	92.9925956478458	-2.91140688203815	8.09685838802946e-05	Down	1.38408351600951e-05	NA	NA	NA	K19892//glucan endo-1,3-beta-glucosidase 4 [EC:3.2.1.39]	gi|723655954|ref|XP_010316236.1|//PREDICTED: glucan endo-1,3-beta-glucosidase 4 [Solanum lycopersicum];gi|565375243|ref|XP_006354142.1|//PREDICTED: glucan endo-1,3-beta-glucosidase 4 isoform X1 [Solanum tuberosum]
Solyc08g008670.3.1	1569	215.90421327559	80.2235496274942	-1.42829369001827	0.00982069750927593	Down	0.00286662748602728	GO:0044424//intracellular part;GO:0005737//cytoplasm	GO:0004615//phosphomannomutase activity;GO:0016868//intramolecular transferase activity, phosphotransferases	GO:0006013//mannose metabolic process;GO:0009298//GDP-mannose biosynthetic process	K17497//phosphomannomutase [EC:5.4.2.8]	gi|460398221|ref|XP_004244661.1|//PREDICTED: phosphomannomutase [Solanum lycopersicum]
Solyc01g008900.3.1	2058	194.003958132478	83.5681528823984	-1.21506093379793	0.000288520257153056	Down	5.61597130927858e-05	NA	NA	NA	K00787//farnesyl diphosphate synthase [EC:2.5.1.1 2.5.1.10]	gi|460365197|ref|XP_004228490.1|//PREDICTED: D-cysteine desulfhydrase 2, mitochondrial [Solanum lycopersicum]
Solyc11g032200.2.1	1704	661.624693993251	282.100554895651	-1.22980357787507	0.00245211973054839	Down	0.000599868115088307	NA	NA	NA	K01052//lysosomal acid lipase/cholesteryl ester hydrolase [EC:3.1.1.13]	gi|460410476|ref|XP_004250654.1|//PREDICTED: triacylglycerol lipase 1 [Solanum lycopersicum]
Solyc02g062910.2.1	3185	364.659316447369	1249.42256631512	1.77664033417404	1.60365145349469e-06	Up	1.96242273811803e-07	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial;K17710//pentatricopeptide repeat domain-containing protein 1	gi|460375436|ref|XP_004233512.1|//PREDICTED: pentatricopeptide repeat-containing protein At4g36680, mitochondrial [Solanum lycopersicum]
Solyc08g075930.3.1	1147	24.7481416912182	67.0963049838332	1.43891311992055	0.0128920203304544	Up	0.00389192159893954	NA	NA	NA	NA	gi|460400916|ref|XP_004245977.1|//PREDICTED: uncharacterized protein LOC101267633 [Solanum lycopersicum]
Solyc02g087300.1.1	1367	1733.88250602814	4608.2707180013	1.41021933221245	1.35555045468982e-08	Up	1.1409098429587e-09	NA	NA	NA	K14004//protein transport protein SEC13	gi|460372899|ref|XP_004232260.1|//PREDICTED: protein transport protein SEC13 homolog B [Solanum lycopersicum]
Solyc07g053240.3.1	1073	7.31117797461327	150.378291558125	4.36234863451928	1.67534436405945e-10	Up	1.04911977472039e-11	NA	NA	NA	K09422//myb proto-oncogene protein, plant	gi|460396523|ref|XP_004243822.1|//PREDICTED: transcription factor WER-like [Solanum lycopersicum]
Solyc10g052490.2.1	992	900.211017610109	182.187700912969	-2.3048376525705	1.93258476716469e-05	Down	2.91530138389575e-06	GO:0044424//intracellular part	GO:0003824//catalytic activity	GO:0008152//metabolic process	K13081//leucoanthocyanidin reductase [EC:1.17.1.3]	gi|460406525|ref|XP_004248713.1|//PREDICTED: isoflavone reductase homolog [Solanum lycopersicum]
Solyc10g086350.2.1	6516	760.317148409559	3663.90686321404	2.26870959497879	1.10713772665406e-09	Up	7.89044033607636e-11	NA	GO:0032561//guanyl ribonucleotide binding	GO:0006810//transport;GO:0035556//intracellular signal transduction	K07901//Ras-related protein Rab-8A	gi|460408396|ref|XP_004249631.1|//PREDICTED: ras-related protein RABE1c-like [Solanum lycopersicum]
Solyc06g007370.1.1	480	33.7161474854517	1.93992840399453	-4.11936438510554	0.000104340994077512	Down	1.83028447192773e-05	NA	NA	NA	K09597//signal peptide peptidase-like 2B [EC:3.4.23.-]	gi|460389566|ref|XP_004240422.1|//PREDICTED: uncharacterized protein LOC101247128 [Solanum lycopersicum]
Solyc08g077790.3.1	1506	510.701530510133	2244.98993732433	2.13615669066605	3.08530378996129e-06	Up	3.98025809492174e-07	NA	NA	NA	K20782;K05864//peptidyl-prolyl isomerase D [EC:5.2.1.8];K10848//DNA excision repair protein ERCC-4 [EC:3.1.-.-]	gi|460400621|ref|XP_004245832.1|//PREDICTED: uncharacterized protein LOC101250144 [Solanum lycopersicum]
Solyc02g087870.3.1	4525	304.455498497673	80.8926033798565	-1.91215167107663	0.011288202257145	Down	0.00334800303265627	GO:0031224//intrinsic component of membrane	GO:0032559//adenyl ribonucleotide binding;GO:0042626//ATPase activity, coupled to transmembrane movement of substances	GO:0006810//transport;GO:0009207//purine ribonucleoside triphosphate catabolic process	K05658//ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:3.6.3.44]	gi|350535719|ref|NP_001234209.1|//L04 [Solanum lycopersicum]
Solyc02g090690.2.1	3062	29.309109334679	61.6568684926564	1.07291249079079	0.0230547852484499	Up	0.00759670126719462	NA	NA	NA	NA	gi|460375686|ref|XP_004233635.1|//PREDICTED: uncharacterized membrane protein At3g27390 [Solanum lycopersicum]
Solyc06g060470.1.1	723	4.78136955823468	44.6519672937959	3.22322791669512	3.58066275240229e-06	Up	4.65801140818697e-07	NA	NA	NA	K20725	gi|460393386|ref|XP_004242290.1|//PREDICTED: protein MKS1-like [Solanum lycopersicum]
Solyc01g010430.3.1	1523	74.886204992901	585.932641032309	2.96796293639138	8.67463070212912e-14	Up	3.34012729808386e-15	NA	NA	NA	NA	gi|723654798|ref|XP_010323732.1|//PREDICTED: uncharacterized protein LOC101261849 [Solanum lycopersicum]
Solyc08g006475.1.1	3147	884.673152258493	4643.14452329833	2.39188574066284	0.00662401272643885	Up	0.00183896104020115	NA	NA	NA	K14816//pre-60S factor REI1	gi|970047769|ref|XP_015085420.1|//PREDICTED: protein KAKU4 [Solanum pennellii];gi|460397880|ref|XP_004244493.1|//PREDICTED: zinc finger protein 622 [Solanum lycopersicum]
Solyc12g088170.2.1	1659	355.652220193747	7.28131687195669	-5.61012396501447	1.37084446928051e-13	Down	5.38056965167876e-15	NA	GO:0016747//transferase activity, transferring acyl groups other than amino-acyl groups	NA	K13065//shikimate O-hydroxycinnamoyltransferase [EC:2.3.1.133]	gi|350534858|ref|NP_001234419.1|//anthocyanin acyltransferase [Solanum lycopersicum]
Solyc07g063860.3.1	645	403.992517312216	48.4034538346575	-3.06114667187187	8.6294166323872e-09	Down	7.05072359407811e-10	NA	NA	NA	NA	gi|723718495|ref|XP_010324339.1|//PREDICTED: uncharacterized protein LOC104648557 [Solanum lycopersicum]
Solyc12g044450.2.1	1290	82.3092635651848	8.83633919697556	-3.21953410409015	5.98234086132558e-06	Down	8.13239791309616e-07	NA	NA	NA	K16573//gamma-tubulin complex component 6	gi|723751041|ref|XP_010314298.1|//PREDICTED: protein trichome birefringence-like 42 [Solanum lycopersicum]
Solyc02g086700.3.1	1326	37.8879311533748	144.637438983481	1.9326307684193	0.046697284359231	Up	0.0172773685906414	GO:0044421//extracellular region part	GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds	GO:0008152//metabolic process;GO:0006950//response to stress	K19891//glucan endo-1,3-beta-glucosidase 1/2/3 [EC:3.2.1.39]	gi|460372991|ref|XP_004232306.1|//PREDICTED: glucan endo-1,3-beta-glucosidase, acidic isoform PR-N-like [Solanum lycopersicum]
Solyc01g095900.3.1	6948	7154.74364763869	769.546707288865	-3.21681927849317	8.65195114995723e-16	Down	2.53482689871268e-17	NA	NA	NA	K03255//protein TIF31	gi|723661575|ref|XP_010327062.1|//PREDICTED: clustered mitochondria protein homolog [Solanum lycopersicum]
Solyc03g006050.3.1	1308	157.140239050936	37.7134933388213	-2.05889996398707	0.0115333533763317	Down	0.00342802146350338	NA	NA	NA	K20718	gi|460376589|ref|XP_004234080.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g34110 [Solanum lycopersicum]
Solyc12g013570.2.1	888	22.4979173195905	108.563634630512	2.2706775676799	0.00142919245011959	Up	0.00032879736850075	NA	NA	NA	K14006//protein transport protein SEC23	gi|970067155|ref|XP_015060656.1|//PREDICTED: cell number regulator 2-like [Solanum pennellii];gi|460412926|ref|XP_004251847.1|//PREDICTED: protein PLANT CADMIUM RESISTANCE 12-like [Solanum lycopersicum]
Solyc01g056780.3.1	1858	8442.92129011237	1391.46906086349	-2.60113343363247	1.64890485364802e-07	Down	1.66992488719311e-08	GO:0030529//intracellular ribonucleoprotein complex;GO:0009536//plastid	GO:0005198//structural molecule activity	GO:0022613//ribonucleoprotein complex biogenesis;GO:0010467//gene expression	K02914//large subunit ribosomal protein L34	gi|460366365|ref|XP_004229053.1|//PREDICTED: 50S ribosomal protein L34, chloroplastic [Solanum lycopersicum]
Solyc02g092880.3.1	1096	3.05451334339389	32.4758823082171	3.4103542736567	2.01642322493167e-05	Up	3.05605219642619e-06	NA	NA	NA	NA	gi|808175943|ref|NP_001294929.1|//uncharacterized protein LOC101250067 isoform 2 [Solanum lycopersicum]
Solyc04g077180.2.1	3110	32.2701660451672	500.950933724733	3.95639639744221	2.83249593990517e-23	Up	3.74808430992372e-25	NA	NA	NA	NA	gi|460385723|ref|XP_004238551.1|//PREDICTED: putative lipase C4A8.10 [Solanum lycopersicum]
Solyc06g071800.3.1	1146	0.629800345534689	95.6441610232271	7.2466385370033	1.60489244071689e-08	Up	1.361538390887e-09	NA	NA	NA	K08867//WNK lysine deficient protein kinase [EC:2.7.11.1]	gi|460391791|ref|XP_004241502.1|//PREDICTED: probable serine/threonine-protein kinase WNK3 [Solanum lycopersicum]
Solyc10g081490.2.1	922	123.251916208938	16.204574626337	-2.92713702128877	3.31101480573278e-06	Down	4.29735856327775e-07	NA	NA	NA	K09422//myb proto-oncogene protein, plant	gi|959092682|ref|NP_001304303.1|//myb-related protein 306-like [Solanum lycopersicum]
Solyc01g102910.3.1	2301	1.29373175680351	48.8097572177823	5.23755915160339	3.16228282498336e-06	Up	4.08546006835856e-07	NA	NA	NA	K00384//thioredoxin reductase (NADPH) [EC:1.8.1.9];K11426//SET and MYND domain-containing protein	gi|460369107|ref|XP_004230405.1|//PREDICTED: germin-like protein subfamily 1 member 14 [Solanum lycopersicum]
Solyc07g042170.3.1	1145	4782.9295910977	26206.2836440235	2.45394631836485	1.06696747557084e-10	Up	6.46273351648506e-12	NA	NA	NA	K13464//jasmonate ZIM domain-containing protein	gi|460396263|ref|XP_004243696.1|//PREDICTED: protein TIFY 10A-like [Solanum lycopersicum]
Solyc08g081170.3.1	3119	1606.62469164466	295.669380065436	-2.44197620527536	3.17528865213904e-07	Down	3.37791628641898e-08	NA	NA	NA	NA	gi|723723640|ref|XP_010325293.1|//PREDICTED: hop-interacting protein THI138 isoform X1 [Solanum lycopersicum]
Solyc05g051410.3.1	3457	253.758620479745	113.777235191641	-1.15724490437446	0.000189955938263593	Down	3.55300021696253e-05	NA	NA	NA	K18810//cyclin D1/2/4, plant	gi|723702321|ref|XP_010321485.1|//PREDICTED: cyclin-D4-1-like [Solanum lycopersicum]
Solyc08g079690.3.1	528	49.1970725542633	13.7834468162651	-1.83563576448273	0.0215410700360859	Down	0.00701923491335407	NA	NA	NA	NA	gi|460400340|ref|XP_004245693.1|//PREDICTED: uncharacterized protein LOC101259274 [Solanum lycopersicum]
Solyc07g018140.3.1	1735	410.433892999566	63.2139438367199	-2.69883514071515	1.62427260184118e-12	Down	7.47112118186974e-14	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460394665|ref|XP_004242921.1|//PREDICTED: probable receptor-like serine/threonine-protein kinase At5g57670 [Solanum lycopersicum]
Solyc08g008150.1.1	273	6.46392739736944	201.230653944343	4.96029528695222	6.10315525597942e-16	Up	1.77216264514983e-17	NA	NA	NA	NA	gi|723720199|ref|XP_010324637.1|//PREDICTED: uncharacterized protein LOC104648615 [Solanum lycopersicum]
Solyc10g011750.3.1	1356	115.248993135905	31.8353209782903	-1.85605393139373	1.73654868525498e-06	Down	2.13735043935886e-07	NA	NA	NA	NA	gi|460405214|ref|XP_004248071.1|//PREDICTED: uncharacterized protein LOC101260577 [Solanum lycopersicum]
Solyc12g027850.2.1	2101	704.796498215927	1442.30580039211	1.03309841857688	0.000261561496056015	Up	5.044428136998e-05	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process	K02208//cyclin-dependent kinase 8/11 [EC:2.7.11.22 2.7.11.23]	gi|460413654|ref|XP_004252198.1|//PREDICTED: cyclin-dependent kinase E-1 isoform X1 [Solanum lycopersicum]
Solyc06g082750.3.1	934	8138.27876690747	1701.19186985919	-2.25817783370341	2.22020572500546e-07	Down	2.2948525702401e-08	GO:0030529//intracellular ribonucleoprotein complex;GO:0009536//plastid	GO:0003723//RNA binding;GO:0005198//structural molecule activity	GO:0010467//gene expression	K02879//large subunit ribosomal protein L17	gi|460393746|ref|XP_004242470.1|//PREDICTED: 50S ribosomal protein L17, chloroplastic-like [Solanum lycopersicum]
Solyc05g050550.3.1	787	900.92543449122	93.98060515156	-3.26097274310467	1.20505240282084e-09	Down	8.63767619883884e-11	NA	NA	NA	NA	gi|460388841|ref|XP_004240072.1|//PREDICTED: uncharacterized protein At4g00950-like [Solanum lycopersicum]
Solyc09g007640.3.1	1404	416.186007293495	173.521908941099	-1.26211063111469	0.00252922825249539	Down	0.000621936737055022	NA	NA	NA	K09645//vitellogenic carboxypeptidase-like protein [EC:3.4.16.-]	gi|460402335|ref|XP_004246668.1|//PREDICTED: serine carboxypeptidase-like 50 [Solanum lycopersicum]
BGI_novel_G000444	253	1104.17050616944	6645.9477580632	2.58951198195634	0.0140498013553926	Up	0.00428961990838008	NA	NA	NA	NA	gi|970066912|ref|XP_015060514.1|//PREDICTED: uncharacterized protein LOC107006481 [Solanum pennellii]
Solyc01g095300.3.1	3601	1259.21139271761	349.838859442087	-1.84775804368038	2.83623409220566e-13	Down	1.16608252709961e-14	NA	NA	NA	NA	gi|460368213|ref|XP_004229962.1|//PREDICTED: uncharacterized protein LOC101246380 [Solanum lycopersicum]
Solyc01g106500.3.1	3019	235.528253915584	3922.16579074106	4.05767847913028	4.0575391466284e-09	Up	3.15945999601414e-10	GO:0016020//membrane	GO:0000166//nucleotide binding;GO:0004672//protein kinase activity;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K00924	gi|460369630|ref|XP_004230660.1|//PREDICTED: receptor-like protein kinase HAIKU2 [Solanum lycopersicum]
Solyc02g091020.2.1	2798	147.491039567068	456.440260498028	1.62979874077231	0.000941164234460981	Up	0.000208208205290216	NA	NA	NA	K14297//nuclear pore complex protein Nup98-Nup96	gi|970006472|ref|XP_015064092.1|//PREDICTED: nuclear pore complex protein NUP98A-like [Solanum pennellii]
Solyc10g076700.2.1	1160	847.793560225481	171.790587533255	-2.30306201496154	0.019060610578547	Down	0.00608734573717723	NA	NA	NA	NA	gi|460407269|ref|XP_004249076.1|//PREDICTED: rhodanese-like domain-containing protein 10 [Solanum lycopersicum]
Solyc04g014740.2.1	841	135.764282927822	332.071476959116	1.29038982579459	0.0017509056626444	Up	0.000412142882794073	NA	NA	NA	K01555//fumarylacetoacetase [EC:3.7.1.2]	gi|723690958|ref|XP_010319529.1|//PREDICTED: fumarylacetoacetase-like [Solanum lycopersicum]
Solyc02g062550.3.1	1720	269.208373094356	5957.7615235379	4.46797518934316	0.00241533751554583	Up	0.00058987965565291	NA	NA	NA	K08900//mitochondrial chaperone BCS1	gi|460375479|ref|XP_004233533.1|//PREDICTED: probable mitochondrial chaperone BCS1-A [Solanum lycopersicum]
Solyc09g065740.2.1	3886	2.77862078951363	26.7999650158858	3.26979025521361	0.00324989131839913	Up	0.000822769562940468	GO:0031224//intrinsic component of membrane	GO:0015101//organic cation transmembrane transporter activity	GO:0015696//ammonium transport	K03320//ammonium transporter, Amt family	gi|723730673|ref|XP_004247332.2|//PREDICTED: ammonium transporter 3 member 1-like [Solanum lycopersicum]
Solyc01g108880.3.1	1732	77.430572371944	273.211520984398	1.81904310973366	2.7263283494145e-07	Up	2.86473819032334e-08	NA	NA	NA	K05282//gibberellin 20-oxidase [EC:1.14.11.12];K06892//feruloyl-CoA ortho-hydroxylase [EC:1.14.11.-]	gi|460369969|ref|XP_004230829.1|//PREDICTED: flavonol synthase/flavanone 3-hydroxylase-like [Solanum lycopersicum]
Solyc02g020910.3.1	5173	2515.08997619129	637.881887848614	-1.97924879268036	4.56272593664384e-08	Down	4.17529900643381e-09	GO:0015629//actin cytoskeleton	GO:0032559//adenyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity	NA	K10357//myosin V	gi|460371390|ref|XP_004231522.1|//PREDICTED: myosin-1 [Solanum lycopersicum]
Solyc05g006090.3.1	1953	392.485894256814	161.671643491238	-1.27957414669645	0.00114411909986509	Down	0.000257797821629808	NA	NA	NA	K17541//SCY1-like protein 2;K03469//ribonuclease HI [EC:3.1.26.4]	gi|723697052|ref|XP_010320621.1|//PREDICTED: uncharacterized protein LOC101251089 isoform X2 [Solanum lycopersicum]
Solyc03g083030.3.1	4155	358.123880596113	174.322517411815	-1.03869978853563	0.014136669871033	Down	0.00431955788367069	NA	NA	NA	K15902//EKC/KEOPS complex subunit PCC1/LAGE3	gi|723682246|ref|XP_010318026.1|//PREDICTED: protein ABIL3 [Solanum lycopersicum]
Solyc09g011740.3.1	2537	1235.4149272918	9149.83260045108	2.88874968127369	2.78420994987758e-09	Up	2.113998683428e-10	NA	NA	NA	K04714//shingomyelin synthase [EC:2.7.8.27]	gi|460401732|ref|XP_004246371.1|//PREDICTED: phosphatidylinositol:ceramide inositolphosphotransferase 2 [Solanum lycopersicum]
Solyc03g118470.3.1	2111	4073.17613313481	21094.1234411776	2.37261503199807	0.00101237708507776	Up	0.000225207486347997	NA	NA	NA	K07766//diphosphoinositol-polyphosphate diphosphatase [EC:3.6.1.52]	gi|460380122|ref|XP_004235807.1|//PREDICTED: nudix hydrolase 18, mitochondrial-like isoform X1 [Solanum lycopersicum]
Solyc09g007730.3.1	1588	45.2185740428892	137.107198028702	1.60031691068108	6.32823813049779e-05	Up	1.06194006498811e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460402323|ref|XP_004246662.1|//PREDICTED: putative serine/threonine-protein kinase isoform X2 [Solanum lycopersicum]
BGI_novel_G000398	822	18.203497740195	1.91565477472797	-3.24830618832862	0.0323540136343082	Down	0.0112481692696881	NA	NA	NA	NA	gi|565388022|ref|XP_006359781.1|//PREDICTED: coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial-like [Solanum tuberosum]
Solyc03g081330.1.1	279	151.059746501669	895.456158385203	2.56750352849597	2.04736792502794e-06	Up	2.54814429017008e-07	NA	NA	NA	NA	gi|460378521|ref|XP_004235019.1|//PREDICTED: uncharacterized protein LOC101248852 [Solanum lycopersicum]
Solyc04g063400.2.1	1529	184.517801898366	451.754612761834	1.29177932093698	0.000168885495116855	Up	3.12993395601984e-05	NA	NA	NA	K04079//molecular chaperone HtpG;K08955//ATP-dependent metalloprotease [EC:3.4.24.-]	gi|460384016|ref|XP_004237711.1|//PREDICTED: F-box/kelch-repeat protein At3g23880-like [Solanum lycopersicum]
Solyc09g007630.3.1	1782	284.674874794999	3264.80817983388	3.51961115776437	4.36343028947119e-23	Up	5.93652920701127e-25	NA	NA	NA	K09523//DnaJ homolog subfamily C member 3	gi|32395916|gb|AAP41818.1|//P58IPK [Solanum lycopersicum];gi|930425309|ref|NP_001234332.2|//P58IPK-like protein [Solanum lycopersicum]
Solyc09g090130.3.1	1346	228.822931873748	2897.30722546057	3.66240912703696	7.57647988755882e-13	Up	3.32678295346067e-14	GO:0043231//intracellular membrane-bounded organelle	GO:0003676//nucleic acid binding	NA	K09422//myb proto-oncogene protein, plant	gi|460404527|ref|XP_004247733.1|//PREDICTED: myb-related protein Myb4-like [Solanum lycopersicum]
Solyc11g050820.1.1	6136	23.6315639878146	1076.97016414599	5.51011935935628	7.16906771067864e-29	Up	5.5315230956854e-31	NA	NA	NA	K05909//laccase [EC:1.10.3.2];K00620//glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1];K18195//rhamnogalacturonan endolyase [EC:4.2.2.23]	gi|694435491|ref|XP_009344908.1|//PREDICTED: uncharacterized protein LOC103936764 [Pyrus x bretschneideri]
BGI_novel_G000127	476	7.05042309891271	77.9904671336815	3.46751605047362	0.000411849940611509	Up	8.31086414108412e-05	NA	NA	NA	NA	gi|565353569|ref|XP_006343702.1|//PREDICTED: uncharacterized protein LOC102605937 [Solanum tuberosum]
Solyc03g097070.3.1	1938	1879.71940909516	11012.105037002	2.55050104798515	2.05344753838037e-12	Up	9.57530516815957e-14	GO:0005829//cytosol;GO:0044464//cell part;GO:0005886//plasma membrane	NA	GO:0006886//intracellular protein transport;GO:0015031//protein transport	NA	gi|970018058|ref|XP_015070182.1|//PREDICTED: TOM1-like protein 2 [Solanum pennellii];gi|460379119|ref|XP_004235312.1|//PREDICTED: TOM1-like protein 2 [Solanum lycopersicum]
Solyc04g082450.3.1	1600	146.454880031362	488.565391994568	1.73809540637458	7.11071348322961e-08	Up	6.77198186583109e-09	NA	NA	NA	NA	gi|723696289|ref|XP_010320458.1|//PREDICTED: uncharacterized protein LOC101259630 [Solanum lycopersicum]
Solyc12g099820.1.1	312	59.3778243028607	141.317351084377	1.25094247528986	0.000342574355330677	Up	6.78815145720097e-05	GO:0048500//signal recognition particle	GO:0003723//RNA binding	GO:0006613//cotranslational protein targeting to membrane;GO:0006448//regulation of translational elongation	K03109//signal recognition particle subunit SRP9	gi|460415069|ref|XP_004252883.1|//PREDICTED: signal recognition particle 9 kDa protein [Solanum lycopersicum]
Solyc12g006320.2.1	2577	13090.1841859912	5609.05768067199	-1.22265507278328	0.000822253451161617	Down	0.000178837367210677	NA	NA	NA	K16911//ATP-dependent RNA helicase DDX21 [EC:3.6.4.13]	gi|460412331|ref|XP_004251555.1|//PREDICTED: DEAD-box ATP-dependent RNA helicase 53 [Solanum lycopersicum]
Solyc03g117210.3.1	1303	209.546571029627	958.270109036661	2.19316145416275	6.99259634389288e-08	Up	6.64645917583377e-09	NA	NA	NA	NA	gi|460380347|ref|XP_004235918.1|//PREDICTED: uncharacterized protein LOC101264808 [Solanum lycopersicum]
Solyc12g088700.1.1	1191	208.597503448368	11.4924427437001	-4.18196450773524	6.57223664565103e-20	Down	1.24203219745977e-21	NA	NA	NA	K14595//abscisate beta-glucosyltransferase [EC:2.4.1.263]	gi|460414811|ref|XP_004252756.1|//PREDICTED: scopoletin glucosyltransferase-like isoform X2 [Solanum lycopersicum]
Solyc02g070050.3.1	1343	1291.34754982649	346.125466476478	-1.8995103379512	9.50666094925361e-07	Down	1.10842535594399e-07	NA	NA	NA	K19706//dihydroceramide fatty acyl 2-hydroxylase [EC:1.14.18.7]	gi|460374710|ref|XP_004233153.1|//PREDICTED: fatty acid 2-hydroxylase 1 [Solanum lycopersicum]
Solyc10g086250.2.1	1616	515.563089818885	103.031141788943	-2.32306851533614	0.0189701150726034	Down	0.00605278757348611	NA	GO:0003677//DNA binding	NA	K09422//myb proto-oncogene protein, plant	gi|525314307|ref|NP_001265992.1|//transcription factor MYB113-like [Solanum lycopersicum]
Solyc06g050620.3.1	2594	3709.57466044367	464.608106624789	-2.99716754495743	6.71213252133784e-15	Down	2.19167589410018e-16	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K07562//nonsense-mediated mRNA decay protein 3	gi|460390548|ref|XP_004240891.1|//PREDICTED: uncharacterized protein LOC101264128 [Solanum lycopersicum]
Solyc06g082155.1.1	1794	2741.29766638004	642.229601216763	-2.0936979256221	9.29996631599215e-08	Down	9.01987190778723e-09	NA	NA	NA	K01103//6-phosphofructo-2-kinase / fructose-2,6-biphosphatase 3  [EC:2.7.1.105 3.1.3.46]	gi|723711807|ref|XP_010323134.1|//PREDICTED: 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase isoform X2 [Solanum lycopersicum];gi|460393830|ref|XP_004242511.1|//PREDICTED: 6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase isoform X1 [Solanum lycopersicum]
Solyc12g049350.2.1	1095	204.391234691534	4.76682511936555	-5.42216081927926	3.45593458032323e-14	Down	1.26113014542137e-15	GO:0043231//intracellular membrane-bounded organelle	GO:0003676//nucleic acid binding	NA	K09422//myb proto-oncogene protein, plant	gi|723751224|ref|XP_010314327.1|//PREDICTED: transcription factor MYB12-like isoform X1 [Solanum lycopersicum];gi|460414085|ref|XP_004252405.1|//PREDICTED: transcription factor MYB12-like isoform X2 [Solanum lycopersicum]
Solyc07g005900.3.1	896	37.9234660231718	7.37883338398361	-2.36162618072877	0.00936115716082021	Down	0.00271539156946112	NA	GO:0046872//metal ion binding	NA	K06268//serine/threonine-protein phosphatase 2B regulatory subunit	gi|460394049|ref|XP_004242618.1|//PREDICTED: calcineurin subunit B-like [Solanum lycopersicum]
Solyc08g062450.1.1	477	105.104666487456	1.74847430838757	-5.90958631634657	1.11999084749056e-08	Down	9.32629921460383e-10	GO:0044424//intracellular part	NA	GO:0050896//response to stimulus	K13993//HSP20 family protein	gi|350534974|ref|NP_001233913.1|//class II small heat shock protein Le-HSP17.6 [Solanum lycopersicum]
Solyc00g201160.3.1	1697	143.648689890261	436.058802731797	1.6019778610029	0.0137029952774656	Up	0.00417300847684858	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|970023718|ref|XP_015073185.1|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 [Solanum pennellii];gi|970022940|ref|XP_015072804.1|//PREDICTED: uncharacterized protein LOC107017034 [Solanum pennellii]
Solyc04g016000.3.1	1295	50.6010512563851	272.311294694345	2.42801755960005	5.80471214253671e-08	Up	5.42866511317452e-09	NA	NA	NA	K09419//heat shock transcription factor, other eukaryote	gi|460381744|ref|XP_004236602.1|//PREDICTED: heat stress transcription factor B-3 [Solanum lycopersicum]
Solyc02g086890.3.1	1183	6009.82672168854	774.994850619502	-2.95506476535589	1.12694652753458e-20	Down	1.93649302666409e-22	NA	NA	NA	K00706//1,3-beta-glucan synthase [EC:2.4.1.34]	gi|460372963|ref|XP_004232292.1|//PREDICTED: uncharacterized protein LOC101249783 [Solanum lycopersicum]
Solyc06g084370.1.1	396	39.7732139950447	124.327825587876	1.64428016621066	0.0368098874490359	Up	0.0130470113222336	NA	NA	NA	NA	gi|698480412|ref|XP_009787257.1|//PREDICTED: uncharacterized protein LOC104235234 [Nicotiana sylvestris]
Solyc09g065700.3.1	12107	1136.14256623255	4017.23012809853	1.82205722945512	0.000102376886924356	Up	1.79010726316592e-05	NA	NA	NA	K18953//factor associated with neutral sphingomyelinase activation	gi|460403447|ref|XP_004247202.1|//PREDICTED: BEACH domain-containing protein lvsA [Solanum lycopersicum]
Solyc02g068220.1.1	273	0.71680686272109	7.30702373406729	3.34962753843164	0.0234224868270538	Up	0.00773706866935109	NA	NA	NA	K11820//N-hydroxythioamide S-beta-glucosyltransferase [EC:2.4.1.195];K13691//pathogen-inducible salicylic acid glucosyltransferase [EC:2.4.1.-]	gi|565398935|ref|XP_006365019.1|//PREDICTED: UDP-glycosyltransferase 87A2-like [Solanum tuberosum]
Solyc05g051330.1.1	1008	28.201441637915	59.9781262481584	1.08866753820375	0.0240200916395164	Up	0.00796849618278275	NA	NA	NA	NA	gi|460389223|ref|XP_004240258.1|//PREDICTED: uncharacterized protein LOC101261031 [Solanum lycopersicum]
Solyc08g075320.3.1	2038	7.5569118749379	73.7859565162615	3.28747755413445	6.31345921298263e-08	Up	5.94694533867017e-09	NA	GO:0005506//iron ion binding;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K09843//(+)-abscisic acid 8'-hydroxylase [EC:1.14.13.93]	gi|460401001|ref|XP_004246018.1|//PREDICTED: abscisic acid 8'-hydroxylase 1-like [Solanum lycopersicum]
Solyc12g013840.2.1	4694	1365.63753045431	47.8171252159702	-4.835903404673	3.70980073967273e-21	Down	6.042876558957e-23	NA	NA	NA	K16240//protein suppressor of PHYA-105 1;K10143//E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]	gi|460412949|ref|XP_004251858.1|//PREDICTED: protein SPA1-RELATED 4-like isoform X1 [Solanum lycopersicum];gi|970068087|ref|XP_015061166.1|//PREDICTED: protein SPA1-RELATED 3-like isoform X2 [Solanum pennellii]
Solyc05g054390.3.1	3389	1429.56329759443	8592.15741459315	2.58744592437185	2.19673038121234e-07	Up	2.26976912804555e-08	NA	NA	NA	K14491//two-component response regulator ARR-B family	gi|460388282|ref|XP_004239797.1|//PREDICTED: two-component response regulator ARR1-like [Solanum lycopersicum]
Solyc09g089720.2.1	1871	184.791362921383	44.3702559579251	-2.058232546563	0.00140584319920386	Down	0.00032279685802504	NA	GO:0043169//cation binding;GO:0019842//vitamin binding;GO:0003824//catalytic activity	GO:0003006//developmental process involved in reproduction;GO:0009692//ethylene metabolic process	K06892//feruloyl-CoA ortho-hydroxylase [EC:1.14.11.-];K13229//2,4-dihydroxy-1,4-benzoxazin-3-one-glucoside dioxygenase [EC:1.14.20.2]	gi|970052188|ref|XP_015087698.1|//PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog [Solanum pennellii]
Solyc06g082770.3.1	1731	2.11655859248884	22.9530925248842	3.43889621216705	0.00528162863926909	Up	0.00142120460514699	NA	NA	NA	K13944	gi|723711616|ref|XP_004242472.2|//PREDICTED: LOB domain-containing protein 24-like [Solanum lycopersicum]
Solyc04g008140.2.1	3086	3.81435209350378	20.7629089305884	2.44449865614306	0.0101801422169033	Up	0.00298293193555528	NA	GO:0043531//ADP binding;GO:0005524//ATP binding;GO:0000166//nucleotide binding	GO:0006952//defense response	K13453;K13457//disease resistance protein RPM1	gi|723691071|ref|XP_010319557.1|//PREDICTED: putative late blight resistance protein homolog R1B-17 [Solanum lycopersicum];gi|460382388|ref|XP_004236921.1|//PREDICTED: putative late blight resistance protein homolog R1A-3 [Solanum lycopersicum]
Solyc01g090940.3.1	1812	1351.69008409549	524.780958099567	-1.36497713077235	1.02577193243108e-08	Down	8.46525666617865e-10	NA	GO:0016772//transferase activity, transferring phosphorus-containing groups	NA	K00981//phosphatidate cytidylyltransferase [EC:2.7.7.41]	gi|723660579|ref|XP_010325585.1|//PREDICTED: uncharacterized protein LOC101245291 [Solanum lycopersicum]
Solyc07g063190.3.1	1390	16636.5009750906	3592.13417631855	-2.21143888972145	2.49646100820007e-09	Down	1.88062758967212e-10	NA	NA	NA	K03671//thioredoxin 1	gi|460397342|ref|XP_004244226.1|//PREDICTED: thioredoxin-like [Solanum lycopersicum]
Solyc03g122270.3.1	2991	755.072840922361	283.636850220227	-1.41257084581012	0.00782037498979847	Down	0.00221627818128216	NA	NA	NA	K12620//U6 snRNA-associated Sm-like protein LSm1	gi|971542621|ref|XP_015162217.1|//PREDICTED: uncharacterized protein LOC102599336 isoform X2 [Solanum tuberosum];gi|460379608|ref|XP_004235553.1|//PREDICTED: uncharacterized protein LOC101253877 isoform X1 [Solanum lycopersicum];gi|723684775|ref|XP_010318474.1|//PREDICTED: uncharacterized protein LOC101253877 isoform X2 [Solanum lycopersicum]
Solyc07g007200.3.1	2481	138.593106780667	18.0153784542836	-2.94355463948164	3.17245130507157e-06	Down	4.09977958650781e-07	NA	NA	NA	K16271//E3 ubiquitin-protein ligase RLIM [EC:2.3.2.27];K15692//E3 ubiquitin-protein ligase RNF13 [EC:2.3.2.27]	gi|723712565|ref|XP_010323264.1|//PREDICTED: E3 ubiquitin-protein ligase RLIM-like isoform X2 [Solanum lycopersicum];gi|460394236|ref|XP_004242710.1|//PREDICTED: E3 ubiquitin-protein ligase RLIM-like isoform X1 [Solanum lycopersicum]
Solyc08g080570.3.1	3665	2842.59354061395	1103.32227365953	-1.36535356950771	0.0164611768277781	Down	0.00513813533456887	GO:0016020//membrane;GO:0044444//cytoplasmic part	GO:0005515//protein binding;GO:0048037//cofactor binding;GO:0016857//racemase and epimerase activity, acting on carbohydrates and derivatives	GO:0050896//response to stimulus;GO:0006012//galactose metabolic process	K01784//UDP-glucose 4-epimerase [EC:5.1.3.2]	gi|460400221|ref|XP_004245634.1|//PREDICTED: bifunctional UDP-glucose 4-epimerase and UDP-xylose 4-epimerase 1-like [Solanum lycopersicum];gi|460400225|ref|XP_004245636.1|//PREDICTED: DEAD-box ATP-dependent RNA helicase 47, mitochondrial [Solanum lycopersicum]
Solyc12g100200.2.1	4542	1528.17760693548	749.032559143738	-1.02871188854413	0.0303075439884686	Down	0.0104220713283106	NA	NA	NA	K10256//omega-6 fatty acid desaturase / acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.6 1.14.19.22]	gi|460415005|ref|XP_004252851.1|//PREDICTED: selenoprotein O [Solanum lycopersicum]
Solyc07g045420.3.1	5873	8726.8062749435	1143.37987827474	-2.93214896494871	1.63899036454645e-10	Down	1.02329985858629e-11	NA	NA	NA	K08869//aarF domain-containing kinase;K17964//leucine-rich PPR motif-containing protein, mitochondrial;K13457//disease resistance protein RPM1	gi|460396015|ref|XP_004243575.1|//PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic [Solanum lycopersicum];gi|698571222|ref|XP_009774821.1|//PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic [Nicotiana sylvestris];gi|970039269|ref|XP_015080971.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g61990, mitochondrial-like [Solanum pennellii]
Solyc05g009790.1.1	1188	2196.07211669579	8813.77046905147	2.00483389428516	3.26408895612646e-07	Up	3.48089999384143e-08	NA	NA	GO:0006351//transcription, DNA-templated	K09287//RAV-like factor	gi|1001184368|ref|NP_001307390.1|//related-to-ABI3/VP1-2 [Solanum lycopersicum]
Solyc03g058340.3.1	531	96.8180023897199	203.787617834084	1.07371916278017	0.00451352733534542	Up	0.00119214457649685	NA	NA	NA	NA	gi|460377996|ref|XP_004234771.1|//PREDICTED: uncharacterized protein LOC101249894 [Solanum lycopersicum]
Solyc03g007960.3.1	1330	168.314013001276	1728.45726366707	3.36025773470515	1.17163112122541e-14	Up	3.96541321780481e-16	GO:0031224//intrinsic component of membrane	GO:0046914//transition metal ion binding;GO:0003824//catalytic activity	GO:0006631//fatty acid metabolic process	K15746//beta-carotene 3-hydroxylase [EC:1.14.13.129]	gi|525314255|ref|NP_001265981.1|//beta-carotene hydroxylase [Solanum lycopersicum]
Solyc08g006740.3.1	1753	77.4547220394229	502.071969310187	2.69646908061537	8.58674439051355e-09	Up	7.01265728329178e-10	NA	GO:0048037//cofactor binding;GO:0016830//carbon-carbon lyase activity	GO:0043436//oxoacid metabolic process	K01590//histidine decarboxylase [EC:4.1.1.22]	gi|350539035|ref|NP_001233859.1|//aromatic amino acid decarboxylase 2 [Solanum lycopersicum]
Solyc09g007080.3.1	5868	315.585261995315	1172.61613496851	1.89362907579687	0.000533192081217226	Up	0.000110442388374986	NA	NA	NA	K01102//pyruvate dehydrogenase phosphatase [EC:3.1.3.43]	gi|460402438|ref|XP_004246719.1|//PREDICTED: probable protein phosphatase 2C 38 [Solanum lycopersicum]
Solyc11g007990.2.1	1934	4781.25760830328	2168.07894054714	-1.14097285171914	0.000788247909307825	Down	0.000170765500555281	NA	GO:0016615//malate dehydrogenase activity	GO:0043648//dicarboxylic acid metabolic process;GO:0044238//primary metabolic process	K00051//malate dehydrogenase (NADP+) [EC:1.1.1.82]	gi|350537825|ref|NP_001234056.1|//malate dehydrogenase [Solanum lycopersicum]
Solyc03g025530.3.1	4091	2260.04902233147	1099.35324806004	-1.03969903359154	1.64082322934583e-05	Down	2.43787140009411e-06	NA	NA	NA	K09313//homeobox protein cut-like;K20478//golgin subfamily B member 1	gi|723679683|ref|XP_010317611.1|//PREDICTED: uncharacterized protein LOC101254456 isoform X2 [Solanum lycopersicum];gi|723679686|ref|XP_010317612.1|//PREDICTED: uncharacterized protein LOC101254456 isoform X3 [Solanum lycopersicum];gi|460377249|ref|XP_004234406.1|//PREDICTED: uncharacterized protein LOC101254456 isoform X1 [Solanum lycopersicum]
Solyc01g088680.3.1	3710	32.8183981500424	119.131306799573	1.85997586384581	0.00723563780890215	Up	0.00203366922192139	NA	NA	NA	K00924;K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|969996231|ref|XP_015062074.1|//PREDICTED: probable receptor-like protein kinase At5g47070 [Solanum pennellii]
Solyc01g108510.3.1	4361	2968.54647100462	14855.4687011766	2.32316552098778	3.20186023171743e-17	Up	8.09177440399738e-19	NA	NA	NA	K03231//elongation factor 1-alpha;K16297//serine carboxypeptidase-like clade II [EC:3.4.16.-]	gi|460369929|ref|XP_004230809.1|//PREDICTED: uncharacterized protein LOC101248243 [Solanum lycopersicum];gi|460369927|ref|XP_004230808.1|//PREDICTED: polyadenylate-binding protein RBP47 [Solanum lycopersicum]
Solyc06g065440.1.1	1645	642.248863430301	158.421536657488	-2.01936395572463	2.59882579196242e-07	Down	2.71913821307533e-08	NA	GO:0046872//metal ion binding;GO:0005488//binding;GO:0003676//nucleic acid binding	NA	K14794//ribosomal RNA-processing protein 12;K14412//alpha-1,4-fucosyltransferase [EC:2.4.1.65];K12309//beta-galactosidase [EC:3.2.1.23]	gi|723709655|ref|XP_010322757.1|//PREDICTED: LOW QUALITY PROTEIN: protein SENSITIVE TO PROTON RHIZOTOXICITY 1-like [Solanum lycopersicum]
BGI_novel_G000132	3648	43.7056268576921	1.81773237096308	-4.58760732181292	8.30634040350388e-05	Down	1.4242271453749e-05	NA	NA	NA	K12447//UDP-sugar pyrophosphorylase [EC:2.7.7.64];K11000//callose synthase [EC:2.4.1.-]	gi|970051242|ref|XP_015087202.1|//PREDICTED: uncharacterized protein LOC107030435 [Solanum pennellii]
Solyc01g058390.3.1	3694	297.793967982975	695.801450713783	1.22436115545524	2.92147445990012e-05	Up	4.57256271698248e-06	GO:0044424//intracellular part	GO:0032559//adenyl ribonucleotide binding;GO:0016773//phosphotransferase activity, alcohol group as acceptor	GO:0016310//phosphorylation;GO:0019318//hexose metabolic process	K18674//N-acetylgalactosamine kinase [EC:2.7.1.157]	gi|460366290|ref|XP_004229021.1|//PREDICTED: galactokinase [Solanum lycopersicum]
Solyc05g005140.3.1	2755	501.433621302278	42.6637104910137	-3.55497738424356	5.6463952825868e-06	Down	7.63572464783991e-07	GO:0031224//intrinsic component of membrane;GO:0016021//integral component of membrane	GO:0004674//protein serine/threonine kinase activity;GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process;GO:0006468//protein phosphorylation	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13418//somatic embryogenesis receptor kinase 1 [EC:2.7.10.1 2.7.11.1]	gi|460385916|ref|XP_004238646.1|//PREDICTED: protein NSP-INTERACTING KINASE 3 [Solanum lycopersicum]
Solyc06g061190.1.1	1107	335.628240895593	3097.79554827187	3.20630591145139	9.54539306223163e-09	Up	7.84182432874553e-10	NA	NA	NA	K02184//formin 2	gi|460392719|ref|XP_004241961.1|//PREDICTED: extensin-like [Solanum lycopersicum]
Solyc09g091020.3.1	3408	1567.74985893716	3158.24513248378	1.01042776296254	0.00281547745239777	Up	0.000700720998570893	NA	NA	NA	K17985//activating molecule in BECN1-regulated autophagy protein 1	gi|460404658|ref|XP_004247798.1|//PREDICTED: uncharacterized protein LOC101247260 [Solanum lycopersicum]
Solyc03g117330.3.1	6710	179.136240738824	778.174118800334	2.11903576273119	3.22834802257955e-06	Up	4.17923538184687e-07	GO:0005737//cytoplasm	GO:0005524//ATP binding;GO:0004827//proline-tRNA ligase activity	GO:0006433//prolyl-tRNA aminoacylation	K01881//prolyl-tRNA synthetase [EC:6.1.1.15]	gi|723686317|ref|XP_010318725.1|//PREDICTED: putative proline--tRNA ligase C19C7.06 isoform X2 [Solanum lycopersicum];gi|971540143|ref|XP_015161652.1|//PREDICTED: proline--tRNA ligase, cytoplasmic-like isoform X2 [Solanum tuberosum]
Solyc11g021240.2.1	1267	2745.17292150137	917.496158853535	-1.58112300589947	0.0166031049650523	Down	0.00518614953060751	GO:0031224//intrinsic component of membrane;GO:0016021//integral component of membrane;GO:0009941//chloroplast envelope;GO:0009507//chloroplast	NA	NA	NA	gi|91209047|ref|YP_538908.1|//hypothetical chloroplast RF1 [Solanum bulbocastanum];gi|813424324|ref|YP_009132102.1|//Ycf1 (chloroplast) [Solanum neorickii]
Solyc01g095740.3.1	9937	2919.74019186351	1246.70245616544	-1.22772281313274	0.000428756348993534	Down	8.69722696892355e-05	NA	NA	NA	K01897//long-chain acyl-CoA synthetase [EC:6.2.1.3]	gi|723661531|ref|XP_010326994.1|//PREDICTED: long chain acyl-CoA synthetase 4-like [Solanum lycopersicum]
Solyc05g026570.3.1	651	881.377708089576	188.613572369312	-2.22432691419213	5.02430329430876e-06	Down	6.73452909137255e-07	NA	NA	NA	NA	gi|961658049|ref|NP_001304839.1|//uncharacterized LOC101243784 [Solanum lycopersicum]
Solyc04g081930.3.1	2685	211.86228821141	475.906641933488	1.16755178064377	0.000124282394189512	Up	2.221777107995e-05	NA	GO:0016705//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen;GO:0019842//vitamin binding;GO:0046914//transition metal ion binding	GO:0019471//4-hydroxyproline metabolic process	K00472//prolyl 4-hydroxylase [EC:1.14.11.2]	gi|460385391|ref|XP_004238387.1|//PREDICTED: probable prolyl 4-hydroxylase 3 [Solanum lycopersicum]
Solyc07g064150.3.1	1036	4925.73437778585	18382.7595439401	1.89994261717026	1.55380728285461e-07	Up	1.56550659220069e-08	NA	GO:0008135//translation factor activity, RNA binding;GO:0003743//translation initiation factor activity	GO:0006413//translational initiation;GO:0006412//translation	K03113//translation initiation factor 1	gi|976910027|gb|KVH96926.1|//Eukaryotic translation initiation factor SUI1 [Cynara cardunculus var. scolymus];gi|460397190|ref|XP_004244151.1|//PREDICTED: protein translation factor SUI1 homolog [Solanum lycopersicum]
Solyc07g007370.3.1	2527	369.136634604022	1132.55944664754	1.61735994888225	5.57570920934803e-05	Up	9.22980639582325e-06	NA	NA	NA	K10088//protein OS-9	gi|460394262|ref|XP_004242723.1|//PREDICTED: NEDD8 ultimate buster 1 [Solanum lycopersicum]
Solyc06g065950.3.1	1466	658.245896964849	2540.54902442027	1.94844177509497	5.36341193061069e-14	Up	2.00518196153367e-15	GO:0016021//integral component of membrane;GO:0031201//SNARE complex	GO:0000149//SNARE binding;GO:0005484//SNAP receptor activity	GO:0006906//vesicle fusion;GO:0006887//exocytosis	K17604//zinc finger SWIM domain-containing protein 3;K08515//vesicle-associated membrane protein 7	gi|460392358|ref|XP_004241783.1|//PREDICTED: vesicle-associated membrane protein 711 [Solanum lycopersicum];gi|971561334|ref|XP_015166914.1|//PREDICTED: protein FAR1-RELATED SEQUENCE 6-like [Solanum tuberosum];gi|697093702|ref|XP_009622495.1|//PREDICTED: protein FAR1-RELATED SEQUENCE 6-like isoform X1 [Nicotiana tomentosiformis]
Solyc04g025600.2.1	3269	4.6886537944104	0.415725692151061	-3.49546994037097	0.043841946501058	Down	0.0160264637444415	GO:0016020//membrane;GO:0044444//cytoplasmic part	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006972//hyperosmotic response;GO:0006464//cellular protein modification process;GO:0008104//protein localization;GO:0043401//steroid hormone mediated signaling pathway	K14502//protein brassinosteroid insensitive 2 [EC:2.7.11.1]	gi|970061661|ref|XP_015057681.1|//PREDICTED: shaggy-related protein kinase eta-like [Solanum pennellii]
Solyc04g077850.3.1	3679	363.852480958531	1357.18418222755	1.89919096788192	4.5699194055317e-06	Up	6.05904403066805e-07	NA	GO:0003824//catalytic activity	NA	K08332//vacuolar protein 8	gi|460384791|ref|XP_004238092.1|//PREDICTED: U-box domain-containing protein 4-like [Solanum lycopersicum]
Solyc02g068010.3.1	1390	352.572589697654	1008.1393326273	1.51570282053321	0.0299926543963169	Up	0.0102986555948588	GO:0031224//intrinsic component of membrane	NA	NA	K01832//thromboxane-A synthase [EC:5.3.99.5]	gi|460375016|ref|XP_004233304.1|//PREDICTED: uncharacterized protein LOC101251059 [Solanum lycopersicum]
Solyc07g064410.1.1	999	206.155122151812	4.99469084867633	-5.36719111305195	7.72769900040064e-13	Down	3.39894320130936e-14	NA	NA	NA	K20417//palmitoyl-[glycerolipid] 3-(E)-desaturase [EC:1.14.19.43]	gi|460397154|ref|XP_004244133.1|//PREDICTED: fatty acid desaturase 4, chloroplastic [Solanum lycopersicum]
Solyc09g056450.3.1	2361	1794.64750291425	5294.79957729315	1.5608755714767	1.27621790162089e-05	Up	1.8481088965995e-06	GO:0043234//protein complex	GO:0019787//ubiquitin-like protein transferase activity	GO:0032446//protein modification by small protein conjugation	K08332//vacuolar protein 8	gi|460403099|ref|XP_004247038.1|//PREDICTED: U-box domain-containing protein 9 [Solanum lycopersicum]
Solyc08g081540.3.1	1903	61.0858682798603	338.720128337176	2.47118315311788	5.6590680804922e-07	Up	6.296525354208e-08	NA	GO:0016846//carbon-sulfur lyase activity;GO:0048037//cofactor binding;GO:0016740//transferase activity	GO:0008652//cellular amino acid biosynthetic process	K20772	gi|902763176|ref|NP_001266271.2|//1-aminocyclopropane-1-carboxylate synthase-like [Solanum lycopersicum]
Solyc06g008180.2.1	2215	1350.25298926354	168.543043373336	-3.00204075589181	3.13839676476461e-13	Down	1.29850171793973e-14	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial;K00799//glutathione S-transferase [EC:2.5.1.18]	gi|723704156|ref|XP_010321813.1|//PREDICTED: pentatricopeptide repeat-containing protein At1g09900 [Solanum lycopersicum]
Solyc01g104970.3.1	5024	1279.83620295436	6479.465855213	2.33991570535444	1.43975279095533e-05	Up	2.1139057117836e-06	NA	NA	NA	K13416//brassinosteroid insensitive 1-associated receptor kinase 1 [EC:2.7.10.1 2.7.11.1]	gi|350540092|ref|NP_001233871.1|//somatic embryogenesis receptor kinase 3B precursor [Solanum lycopersicum]
Solyc02g068400.3.1	1650	65.0065490559501	18.3474518164423	-1.82500536067442	0.0115998416166867	Down	0.00344994543982194	NA	NA	NA	NA	gi|460374942|ref|XP_004233267.1|//PREDICTED: polygalacturonase QRT3 [Solanum lycopersicum]
Solyc01g094130.2.1	1730	62.5421501137831	1.7238499670347	-5.18112269602319	5.72259616092841e-05	Down	9.49146123042631e-06	NA	NA	NA	K20495	gi|460370681|ref|XP_004231179.1|//PREDICTED: cytochrome P450 704C1-like [Solanum lycopersicum]
Solyc07g056370.3.1	1869	1100.64325963097	2439.23669632913	1.14808282128286	0.000736202034549944	Up	0.000158310330152029	NA	NA	NA	NA	gi|723714606|ref|XP_010323625.1|//PREDICTED: synaptonemal complex protein ZIP1-like [Solanum lycopersicum]
Solyc04g007330.2.1	6427	42.8721579519463	400.305601703128	3.2229888627758	3.46984637784862e-14	Up	1.26750016784391e-15	NA	NA	NA	K03283//heat shock 70kDa protein 1/8;K01870//isoleucyl-tRNA synthetase [EC:6.1.1.5];K17616//CTD small phosphatase-like protein 2 [EC:3.1.3.-];K19613//leucine-rich repeat protein SHOC2	gi|723690397|ref|XP_010319416.1|//PREDICTED: HORMA domain-containing protein 1 [Solanum lycopersicum]
Solyc12g087890.2.1	1732	768.20168769501	261.063758663	-1.55708293934066	0.00105234861014021	Down	0.000235079962001279	NA	NA	NA	NA	gi|723752183|ref|XP_010314584.1|//PREDICTED: transcription factor bHLH145-like isoform X1 [Solanum lycopersicum]
Solyc01g009080.3.1	782	3212.51842937919	115.593098462207	-4.7965775619269	1.31703599950311e-32	Down	7.56014402577453e-35	GO:0009532//plastid stroma;GO:0009534//chloroplast thylakoid	NA	NA	K00326//cytochrome-b5 reductase [EC:1.6.2.2];K09838//zeaxanthin epoxidase [EC:1.14.13.90]	gi|460365166|ref|XP_004228475.1|//PREDICTED: uncharacterized protein LOC101252420 [Solanum lycopersicum]
Solyc09g091910.2.1	3835	167.857426235437	13.8522421833406	-3.59904494409537	0.000151336472243997	Down	2.76690545831522e-05	NA	NA	NA	K14407//cleavage stimulation factor subunit 2	gi|460404777|ref|XP_004247857.1|//PREDICTED: purple acid phosphatase 15 isoform X1 [Solanum lycopersicum]
Solyc08g076630.2.1	1275	0.766382742707976	11.9077176005865	3.95768802735152	0.00403043452220888	Up	0.0010498239317577	NA	NA	NA	K00924	gi|723725605|ref|XP_004246189.2|//PREDICTED: basic 7S globulin-like [Solanum lycopersicum]
Solyc02g063150.3.1	757	221845.022993168	10345.2642824082	-4.42250978103115	2.70998687193535e-10	Down	1.74753141808863e-11	GO:0009536//plastid;GO:0009507//chloroplast	GO:0016831//carboxy-lyase activity;GO:0004497//monooxygenase activity;GO:0005488//binding;GO:0016491//oxidoreductase activity;GO:0016984//ribulose-bisphosphate carboxylase activity	GO:0015977//carbon fixation;GO:0019253//reductive pentose-phosphate cycle;GO:0009853//photorespiration;GO:0043094//cellular metabolic compound salvage;GO:0055114//oxidation-reduction process	K01602//ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]	gi|822092500|ref|NP_001295872.1|//ribulose bisphosphate carboxylase small chain 1, chloroplastic [Solanum lycopersicum]
Solyc08g029000.3.1	2947	86.7026315195128	13452.9903221704	7.27763539294888	8.50864893844523e-23	Up	1.20201951232695e-24	NA	GO:0016702//oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen;GO:0046914//transition metal ion binding	GO:0006633//fatty acid biosynthetic process	K15718//linoleate 9S-lipoxygenase [EC:1.13.11.58]	gi|460398697|ref|XP_004244890.1|//PREDICTED: probable linoleate 9S-lipoxygenase 5 [Solanum lycopersicum]
Solyc10g018300.2.1	2398	46448.4793484409	1835.92501705969	-4.66105232332562	5.24825262018491e-22	Down	7.92285042185362e-24	GO:0009534//chloroplast thylakoid	GO:0043169//cation binding;GO:0016744//transferase activity, transferring aldehyde or ketonic groups	NA	K00615//transketolase [EC:2.2.1.1]	gi|460406209|ref|XP_004248560.1|//PREDICTED: transketolase, chloroplastic [Solanum lycopersicum]
Solyc07g049705.1.1	2345	4.08587273544232	26.5043639216173	2.69751374418205	0.0337963373987296	Up	0.0118251908141447	NA	NA	NA	K13453;K13457//disease resistance protein RPM1	gi|460395851|ref|XP_004243493.1|//PREDICTED: putative late blight resistance protein homolog R1B-16 isoform X1 [Solanum lycopersicum]
Solyc01g086670.3.1	614	1056.54276944144	2851.9418350425	1.4325933889609	0.0169368159221616	Up	0.00530048853744106	NA	NA	NA	NA	NA
Solyc02g070935.1.1	789	5861.41673185849	152.412779229528	-5.2651936354548	2.2647436131005e-09	Down	1.69425243458055e-10	GO:0009521//photosystem;GO:0010287//plastoglobule;GO:0009535//chloroplast thylakoid membrane;GO:0009523//photosystem II;GO:0009534//chloroplast thylakoid;GO:0031224//intrinsic component of membrane;GO:0016021//integral component of membrane;GO:0009941//chloroplast envelope;GO:0009522//photosystem I	GO:0043169//cation binding;GO:0031409//pigment binding;GO:0046872//metal ion binding;GO:0046906//tetrapyrrole binding;GO:0016168//chlorophyll binding	GO:0009768//photosynthesis, light harvesting in photosystem I;GO:0009765//photosynthesis, light harvesting;GO:0006464//cellular protein modification process;GO:0006091//generation of precursor metabolites and energy;GO:0009416//response to light stimulus;GO:0018298//protein-chromophore linkage	K08912//light-harvesting complex II chlorophyll a/b binding protein 1	gi|413968514|gb|AFW90594.1|//chloroplast chlorophyll a/b binding protein [Solanum tuberosum];gi|168296|gb|AAA33396.1|//light-harvesting chlorophyll a/b protein precursor [Lemna gibba];gi|970008421|ref|XP_015065068.1|//PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic [Solanum pennellii];gi|970007787|ref|XP_015064801.1|//PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like [Solanum pennellii];gi|460376914|ref|XP_004234241.1|//PREDICTED: uncharacterized protein LOC101245729 [Solanum lycopersicum];gi|473952979|gb|EMS50795.1|//Chlorophyll a-b binding protein, chloroplastic [Triticum urartu];gi|970016870|ref|XP_015069551.1|//PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic [Solanum pennellii];gi|170404|gb|AAA34148.1|//chlorophyll a/b-binding protein Cab-3C [Solanum lycopersicum];gi|460374596|ref|XP_004233096.1|//PREDICTED: chlorophyll a-b binding protein 1C, chloroplastic [Solanum lycopersicum]
Solyc02g085730.3.1	1116	5290.03769950705	43797.1904453637	3.04948841619576	1.54706990804625e-07	Up	1.55756516387093e-08	GO:0009536//plastid	GO:0009975//cyclase activity	NA	K10525//allene oxide cyclase [EC:5.3.99.6]	gi|350536999|ref|NP_001234019.1|//allene oxide cyclase [Solanum lycopersicum]
Solyc02g077120.3.1	1250	66.8903939281489	15.6614406678029	-2.0945821118907	7.81015989258889e-05	Down	1.33185703435884e-05	NA	NA	NA	K21026;K01206//alpha-L-fucosidase [EC:3.2.1.51]	gi|460376124|ref|XP_004233850.1|//PREDICTED: GDSL esterase/lipase At1g28580-like isoform X1 [Solanum lycopersicum]
Solyc05g024260.3.1	1299	1882.30188874578	11.1846607829208	-7.39483271790564	1.25771838146684e-24	Down	1.48143360870554e-26	NA	NA	NA	K15382//solute carrier family 50 (sugar transporter)	gi|460387271|ref|XP_004239304.1|//PREDICTED: bidirectional sugar transporter N3 [Solanum lycopersicum]
Solyc04g051860.3.1	1540	1618.61470882539	5118.57460827939	1.6609825017654	0.000151768377375348	Up	2.77536774788824e-05	GO:0009536//plastid;GO:0009507//chloroplast	GO:0000287//magnesium ion binding;GO:0004765//shikimate kinase activity;GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0016301//kinase activity	GO:0016310//phosphorylation;GO:0008652//cellular amino acid biosynthetic process;GO:0009423//chorismate biosynthetic process;GO:0009073//aromatic amino acid family biosynthetic process;GO:0006796//phosphate-containing compound metabolic process;GO:0019632//shikimate metabolic process	K00891//shikimate kinase [EC:2.7.1.71]	gi|350538979|ref|NP_001234112.1|//shikimate kinase, chloroplastic [Solanum lycopersicum]
Solyc08g075120.3.1	2427	449.071333696228	43.6502932846463	-3.36288137873574	8.21916682357564e-10	Down	5.75966662752431e-11	NA	NA	NA	K10418//dynein light chain LC8-type;K20826;K10770//alkylated DNA repair protein alkB homolog 8 [EC:1.14.11.- 2.1.1.229]	gi|460401013|ref|XP_004246024.1|//PREDICTED: rop guanine nucleotide exchange factor 14 [Solanum lycopersicum]
Solyc11g018805.1.1	1173	44.757751716068	4307.10438546099	6.58843691015312	9.35989176781815e-12	Up	4.79019360265928e-13	NA	GO:0016209//antioxidant activity;GO:0005506//iron ion binding;GO:0003824//catalytic activity	GO:0042743//hydrogen peroxide metabolic process;GO:0006950//response to stress	K00430//peroxidase [EC:1.11.1.7]	gi|970062137|ref|XP_015057952.1|//PREDICTED: lignin-forming anionic peroxidase [Solanum pennellii]
Solyc11g066250.2.1	3437	3038.12633675638	375.931724167095	-3.01463929185435	3.4057065191878e-08	Down	3.04035601366288e-09	NA	GO:0004180//carboxypeptidase activity	GO:0019538//protein metabolic process	K16298//serine carboxypeptidase-like clade IV [EC:3.4.16.-]	gi|460411135|ref|XP_004250970.1|//PREDICTED: serine carboxypeptidase-like [Solanum lycopersicum]
Solyc03g122120.3.1	2575	240.70728415279	719.445265367644	1.5796051319078	0.00899311590808717	Up	0.00259153791133972	NA	NA	NA	K09458//3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]	gi|723684806|ref|XP_010318480.1|//PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic-like [Solanum lycopersicum];gi|720057146|ref|XP_010273890.1|//PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic-like isoform X1 [Nelumbo nucifera]
Solyc04g071150.3.1	6531	39.6600754553062	8.15285851473139	-2.28230953865211	0.000878144808745102	Down	0.000192662902351039	NA	GO:0005506//iron ion binding;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K01590//histidine decarboxylase [EC:4.1.1.22];K07437//cytochrome P450, family 26, subfamily A	gi|970024423|ref|XP_015073523.1|//PREDICTED: abscisic acid 8'-hydroxylase 3-like [Solanum pennellii];gi|460384149|ref|XP_004237776.1|//PREDICTED: abscisic acid 8'-hydroxylase 3-like [Solanum lycopersicum]
Solyc08g080130.3.1	3713	641.596184185059	9904.51718240454	3.94834918278988	5.49610060262852e-11	Up	3.19178646894857e-12	NA	GO:0004620//phospholipase activity	NA	K01115//phospholipase D1/2 [EC:3.1.4.4]	gi|807045887|ref|NP_001234509.2|//phospholipase PLDb1 [Solanum lycopersicum]
Solyc08g079005.1.1	1365	264.387653495295	61.4723755238571	-2.10464466431172	2.84382609015766e-07	Down	3.00304134240966e-08	NA	NA	NA	NA	gi|460400441|ref|XP_004245743.1|//PREDICTED: uncharacterized protein LOC101248807 [Solanum lycopersicum]
Solyc01g073860.3.1	711	1.1763549189039	245.473816170388	7.70510193288124	1.34522429428655e-19	Up	2.61744103778731e-21	NA	NA	NA	K17609//nucleoredoxin [EC:1.8.1.8];K16219//protein N-terminal methyltransferase [EC:2.1.1.244];K20393//PRA1 family protein 3	gi|460366962|ref|XP_004229344.1|//PREDICTED: uncharacterized protein LOC101249575 [Solanum lycopersicum]
Solyc10g085000.2.1	2087	197.198266650508	473.331211814752	1.2632031869525	0.0144054696950279	Up	0.00441593047457542	NA	GO:0032559//adenyl ribonucleotide binding;GO:0016301//kinase activity	GO:0006464//cellular protein modification process	K14500//BR-signaling kinase [EC:2.7.11.1]	gi|460408238|ref|XP_004249553.1|//PREDICTED: probable serine/threonine-protein kinase At5g41260 [Solanum lycopersicum]
Solyc08g081830.3.1	4294	461.788182507764	149.198195703692	-1.6300011652028	0.000192736499319104	Down	3.61578500474523e-05	NA	NA	NA	NA	gi|460400053|ref|XP_004245550.1|//PREDICTED: uncharacterized protein At5g41620 [Solanum lycopersicum]
Solyc03g034390.1.1	288	146.803236281944	10.547217905488	-3.79894936573624	0.000207253343339352	Down	3.91593557994325e-05	NA	NA	NA	NA	gi|723680401|ref|XP_010317726.1|//PREDICTED: non-specific lipid-transfer protein 2-like [Solanum lycopersicum]
Solyc05g014700.3.1	1156	94.7536399268618	16.9222687141082	-2.48525836605149	0.000753793307259446	Down	0.000162514555285099	NA	NA	NA	K09775//uncharacterized protein	gi|460387020|ref|XP_004239189.1|//PREDICTED: uncharacterized protein LOC101261814 [Solanum lycopersicum]
Solyc06g063100.3.1	1939	348.818837587829	145.123552651041	-1.26519627457047	0.000173669737470479	Down	3.22505695906516e-05	GO:0005783//endoplasmic reticulum;GO:0016021//integral component of membrane	GO:0061630//ubiquitin protein ligase activity;GO:0031625//ubiquitin protein ligase binding	GO:0030433//ER-associated ubiquitin-dependent protein catabolic process;GO:0000209//protein polyubiquitination	K04554//ubiquitin-conjugating enzyme E2 J2 [EC:2.3.2.23]	gi|460392599|ref|XP_004241903.1|//PREDICTED: ubiquitin-conjugating enzyme E2 34 isoform X1 [Solanum lycopersicum];gi|460392601|ref|XP_004241904.1|//PREDICTED: ubiquitin-conjugating enzyme E2 34 isoform X2 [Solanum lycopersicum]
Solyc11g066300.2.1	1971	902.725993588831	126.550478654695	-2.8345751855486	1.79528424080628e-07	Down	1.83021559512642e-08	NA	NA	NA	NA	gi|460411143|ref|XP_004250974.1|//PREDICTED: CRS2-associated factor 2, chloroplastic [Solanum lycopersicum]
Solyc01g060260.3.1	1941	175.581815376278	57.535241280724	-1.60962562951511	0.000413237833410425	Down	8.34691820201431e-05	GO:0005739//mitochondrion	NA	GO:0006979//response to oxidative stress;GO:0009651//response to salt stress;GO:0042775//mitochondrial ATP synthesis coupled electron transport;GO:0009737//response to abscisic acid	K17964//leucine-rich PPR motif-containing protein, mitochondrial	gi|723656908|ref|XP_010318851.1|//PREDICTED: putative pentatricopeptide repeat-containing protein At3g16890, mitochondrial [Solanum lycopersicum];gi|460366241|ref|XP_004228997.1|//PREDICTED: uncharacterized protein LOC101258403 isoform X2 [Solanum lycopersicum]
Solyc02g069290.3.1	4664	3198.46722537274	576.883586928858	-2.47102857748483	8.05302403687723e-12	Down	4.07094050641759e-13	NA	NA	NA	K11593//eukaryotic translation initiation factor 2C	gi|460374825|ref|XP_004233209.1|//PREDICTED: putative E3 ubiquitin-protein ligase LIN isoform X2 [Solanum lycopersicum]
Solyc09g083100.1.1	1305	81.2750436637846	233.622671680029	1.52329595482386	1.49277479992297e-06	Up	1.81338641454785e-07	NA	NA	NA	K12761//carbon catabolite-derepressing protein kinase [EC:2.7.11.1]	gi|460404318|ref|XP_004247630.1|//PREDICTED: CBL-interacting serine/threonine-protein kinase 7-like [Solanum lycopersicum]
Solyc00g052940.3.1	1037	217.397990921055	1055.7842748207	2.27990457042894	6.42842044871751e-07	Up	7.22202893709355e-08	NA	NA	NA	K07874//Ras-related protein Rab-1A	gi|723754421|ref|XP_004253380.2|//PREDICTED: WAT1-related protein At5g64700 [Solanum lycopersicum]
Solyc10g006030.3.1	905	13231.1158191122	3484.98084441179	-1.924712102192	8.40658209597218e-07	Down	9.69508163297224e-08	GO:0030529//intracellular ribonucleoprotein complex;GO:0009536//plastid	GO:0003723//RNA binding;GO:0005198//structural molecule activity	GO:0010467//gene expression	K02946//small subunit ribosomal protein S10	gi|460405820|ref|XP_004248372.1|//PREDICTED: 30S ribosomal protein S10, chloroplastic [Solanum lycopersicum]
Solyc03g120380.3.1	1085	37.9383636230364	7.93804622043856	-2.25680158525035	0.0351660981550701	Down	0.0123713148347828	NA	NA	NA	K14484//auxin-responsive protein IAA	gi|525313550|ref|NP_001266080.1|//IAA19 [Solanum lycopersicum]
Solyc08g008240.3.1	3573	2.32398767307423	11.4267043866319	2.29773504961223	0.0369315452623881	Up	0.0130928853060449	NA	NA	NA	K14510//serine/threonine-protein kinase CTR1 [EC:2.7.11.1];K17535//serine/threonine-protein kinase TNNI3K [EC:2.7.11.1]	gi|460398153|ref|XP_004244627.1|//PREDICTED: serine/threonine-protein kinase MARK1 [Solanum lycopersicum]
Solyc12g098220.2.1	1128	26.9299282080203	66.4686180363819	1.30346297502672	0.013199083112644	Up	0.00399839527569917	NA	NA	NA	NA	gi|723753245|ref|XP_010314762.1|//PREDICTED: uncharacterized protein LOC101264503 [Solanum lycopersicum]
Solyc06g053730.1.1	1566	187.338127206846	59.1329739127717	-1.66360980793125	0.00293691814505447	Down	0.000734448480511794	NA	GO:0004674//protein serine/threonine kinase activity;GO:0000166//nucleotide binding	NA	K08835//serine/threonine-protein kinase OSR1/STK39 [EC:2.7.11.1]	gi|460390809|ref|XP_004241017.1|//PREDICTED: serine/threonine-protein kinase BLUS1 [Solanum lycopersicum]
Solyc04g008110.3.1	3785	295.275759813981	17.3965139392106	-4.08519278491777	3.04258774395589e-10	Down	1.98582493650916e-11	GO:0044464//cell part	GO:0032559//adenyl ribonucleotide binding;GO:0004871//signal transducer activity;GO:0004673//protein histidine kinase activity	GO:0007165//signal transduction;GO:0006468//protein phosphorylation;GO:0006351//transcription, DNA-templated	K14489//arabidopsis histidine kinase 2/3/4 (cytokinin receptor) [EC:2.7.13.3]	gi|460382390|ref|XP_004236922.1|//PREDICTED: histidine kinase 4 [Solanum lycopersicum]
Solyc08g062290.3.1	1365	30.1380926961012	3.16743262729095	-3.25020228012907	0.000416467009863189	Down	8.41689327373718e-05	NA	NA	NA	K09458//3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]	gi|723722189|ref|XP_010325016.1|//PREDICTED: uncharacterized protein LOC104648824 [Solanum lycopersicum]
Solyc12g008680.2.1	2197	122.725526376119	23.4527345249174	-2.38760730254081	0.00302798937679496	Down	0.000760396950644594	NA	NA	NA	K09422//myb proto-oncogene protein, plant	gi|460412532|ref|XP_004251652.1|//PREDICTED: meiotic nuclear division protein 1 homolog [Solanum lycopersicum]
Solyc05g053380.3.1	1226	3.77084930337934	23.2345556990681	2.62331065579983	0.00359614479863033	Up	0.000924772736161871	NA	NA	NA	K08819//cyclin-dependent kinase 12/13 [EC:2.7.11.22 2.7.11.23];K13424//WRKY transcription factor 33	gi|460388448|ref|XP_004239879.1|//PREDICTED: probable WRKY transcription factor 48 [Solanum lycopersicum]
Solyc06g005840.3.1	807	91.3237318467892	197.636414306101	1.11378706641918	0.000584530332619584	Up	0.000122666832139864	GO:0005758//mitochondrial intermembrane space;GO:0005739//mitochondrion;GO:0019866//organelle inner membrane	GO:0043169//cation binding;GO:0046872//metal ion binding	GO:0006612//protein targeting to membrane;GO:0045039//protein import into mitochondrial inner membrane	K17778//mitochondrial import inner membrane translocase subunit TIM10	gi|460389496|ref|XP_004240388.1|//PREDICTED: mitochondrial import inner membrane translocase subunit TIM10-like [Solanum lycopersicum];gi|970036522|ref|XP_015079599.1|//PREDICTED: mitochondrial import inner membrane translocase subunit TIM10-like isoform X1 [Solanum pennellii]
Solyc01g105930.1.1	306	0.383199812723535	4.33534653833608	3.49997855624224	0.0426038834630381	Up	0.0154913106896502	NA	NA	GO:0016098//monoterpenoid metabolic process	K12742//isoprene synthase [EC:4.2.3.27]	gi|565370232|ref|XP_006351728.1|//PREDICTED: (-)-camphene/tricyclene synthase, chloroplastic-like [Solanum tuberosum]
Solyc09g098130.2.1	5742	498.518551417865	159.809618272355	-1.64129295211113	0.000152222057439062	Down	2.78706853340044e-05	NA	NA	NA	K13453;K13457//disease resistance protein RPM1	gi|460405157|ref|XP_004248043.1|//PREDICTED: putative late blight resistance protein homolog R1A-3 [Solanum lycopersicum]
Solyc03g118920.3.1	4855	3516.36077980696	995.047117758761	-1.82124635177613	4.13411174463261e-10	Down	2.75679361530779e-11	NA	NA	NA	K14442//ATP-dependent RNA helicase DHX36 [EC:3.6.4.13]	gi|460380006|ref|XP_004235749.1|//PREDICTED: ATP-dependent RNA helicase DHX36 [Solanum lycopersicum]
Solyc03g083330.3.1	2928	600.444056195602	1224.08588175341	1.02760304056265	0.0364212066118318	Up	0.0128859494261084	NA	NA	NA	K01278//dipeptidyl-peptidase 4 [EC:3.4.14.5]	gi|460378403|ref|XP_004234962.1|//PREDICTED: dipeptidyl peptidase 8 [Solanum lycopersicum]
Solyc12g010570.1.1	813	39.7350462241427	600.347844003693	3.91731471856026	1.69894547508377e-10	Up	1.06706542623981e-11	NA	NA	NA	K17345//tetraspanin-5;K17294	gi|460412799|ref|XP_004251785.1|//PREDICTED: tetraspanin-8-like [Solanum lycopersicum]
Solyc05g047600.3.1	1593	105.576878519827	9.19268153036008	-3.52166434588664	9.81433423558478e-09	Down	8.0810587171637e-10	NA	NA	NA	K07198//5'-AMP-activated protein kinase, catalytic alpha subunit [EC:2.7.11.11]	gi|971574261|ref|XP_015170425.1|//PREDICTED: CBL-interacting serine/threonine-protein kinase 9-like [Solanum tuberosum]
Solyc04g077130.1.1	336	2012.17562730048	193.166935380378	-3.3808361598172	6.5291229290967e-06	Down	8.93896992640978e-07	GO:0009536//plastid	NA	NA	K19035//50S ribosomal protein 6	gi|460384705|ref|XP_004238050.1|//PREDICTED: 50S ribosomal protein 6, chloroplastic [Solanum lycopersicum]
Solyc06g005750.3.1	1071	17363.3076090353	562.364288099013	-4.94839300709797	9.89988797956253e-11	Down	5.96694455902513e-12	GO:0031224//intrinsic component of membrane	GO:0016709//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen;GO:0046914//transition metal ion binding	GO:0006631//fatty acid metabolic process	K14424//4-alpha-methyl-delta7-sterol-4alpha-methyl oxidase [EC:1.14.13.72]	gi|460389474|ref|XP_004240377.1|//PREDICTED: methylsterol monooxygenase 2-2-like [Solanum lycopersicum]
Solyc05g017970.1.1	837	343.875557766248	16.2523489468959	-4.40316642401007	6.60493102557423e-10	Down	4.54969156674414e-11	NA	NA	NA	NA	gi|971535504|ref|XP_015164026.1|//PREDICTED: uncharacterized protein LOC107060538 [Solanum tuberosum]
Solyc07g006660.1.1	1662	5.71346513902908	0.381426446169636	-3.90488920461194	0.0180773727653066	Down	0.00572548965211012	NA	NA	NA	K20929	gi|723712417|ref|XP_004243010.2|//PREDICTED: galactose oxidase [Solanum lycopersicum]
Solyc01g090910.3.1	1222	651.950989766421	2162.72292326424	1.73001342715621	5.51655094144394e-13	Up	2.35669328583548e-14	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K17302//coatomer subunit beta'	gi|460367860|ref|XP_004229788.1|//PREDICTED: vesicle-associated protein 1-1 [Solanum lycopersicum]
Solyc02g063410.3.1	1014	27.6076282501348	6.07843750679541	-2.18329452808372	0.0445637991636599	Down	0.0163468148042932	NA	NA	NA	NA	gi|460376345|ref|XP_004233959.1|//PREDICTED: uncharacterized protein At5g65660-like [Solanum lycopersicum]
Solyc04g072690.3.1	2261	247.044770869257	109.047717245439	-1.17981294938471	0.0476781225597381	Down	0.0176989124262872	NA	GO:0008233//peptidase activity	NA	K00924	gi|460384361|ref|XP_004237880.1|//PREDICTED: aspartic proteinase-like protein 1 [Solanum lycopersicum]
Solyc11g006190.2.1	1495	1594.4292339661	783.216654012818	-1.0255567201578	0.00146020143358931	Down	0.000337183087859169	NA	NA	NA	NA	gi|460408979|ref|XP_004249918.1|//PREDICTED: uncharacterized protein LOC101252942 [Solanum lycopersicum]
Solyc09g097780.2.1	680	3305.56422413822	6851.16701408792	1.05145320956849	0.0286018300550287	Up	0.0097432579720034	NA	NA	GO:0006259//DNA metabolic process	K10747//DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7];K13098//RNA-binding protein FUS	gi|700196943|gb|KGN52120.1|//hypothetical protein Csa_5G611020 [Cucumis sativus];gi|723733544|ref|XP_010326962.1|//PREDICTED: cold and drought-regulated protein CORA-like [Solanum lycopersicum]
Solyc01g090680.3.1	2364	939.595153420571	275.786058732651	-1.76848974273638	0.000730904461376586	Down	0.000157007693861386	NA	NA	NA	K02355//elongation factor G	gi|460367826|ref|XP_004229771.1|//PREDICTED: uncharacterized protein LOC101265167 [Solanum lycopersicum]
Solyc12g100140.2.1	4836	1277.63416442386	409.250388229657	-1.64241910618692	0.000132004926365727	Down	2.37557695129615e-05	NA	GO:0046983//protein dimerization activity	NA	K11253//histone H3;K12126//phytochrome-interacting factor 3	gi|723752693|ref|XP_010314674.1|//PREDICTED: transcription factor bHLH130-like [Solanum lycopersicum]
Solyc06g061210.3.1	1596	0.488024841609534	22.4114272598851	5.52113613259897	0.000114341679941496	Up	2.02702038840672e-05	NA	NA	NA	K13681//xyloglucan fucosyltransferase [EC:2.4.1.-]	gi|460393352|ref|XP_004242273.1|//PREDICTED: galactoside 2-alpha-L-fucosyltransferase-like [Solanum lycopersicum]
Solyc01g095040.3.1	2961	1308.77285810467	2671.99861254525	1.02970452421096	0.000218604119140738	Up	4.14588399503533e-05	NA	GO:0016614//oxidoreductase activity, acting on CH-OH group of donors;GO:0005488//binding	NA	K00058//D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95];K04496//C-terminal binding protein;K15919//hydroxypyruvate reductase 2	gi|460368093|ref|XP_004229904.1|//PREDICTED: C-terminal binding protein AN [Solanum lycopersicum]
Solyc05g006650.3.1	1603	1226.19338544049	362.784510522913	-1.75700176245872	1.83604195439585e-05	Down	2.75597918232894e-06	NA	NA	NA	K11253//histone H3;K12126//phytochrome-interacting factor 3	gi|460386108|ref|XP_004238742.1|//PREDICTED: transcription factor bHLH79 [Solanum lycopersicum]
Solyc03g121460.1.1	549	246.324754701966	1276.79829946414	2.37389710957908	1.48672560937952e-06	Up	1.80437549729377e-07	NA	NA	NA	K20359//PRA1 family protein 1	gi|460379718|ref|XP_004235608.1|//PREDICTED: PRA1 family protein F3-like [Solanum lycopersicum]
Solyc04g071690.3.1	1562	1.07426639320963	12.9024649742015	3.58622301641105	0.00408095979709851	Up	0.00106453235022649	NA	NA	NA	K14525//ribonucleases P/MRP protein subunit RPP25 [EC:3.1.26.5]	gi|723693946|ref|XP_010320108.1|//PREDICTED: ribonuclease P protein subunit p25-like protein [Solanum lycopersicum]
Solyc08g042100.3.1	2187	183.89147818161	39.2973064889757	-2.22635228859309	0.0248921060910397	Down	0.00830788422316868	NA	NA	NA	K03695//ATP-dependent Clp protease ATP-binding subunit ClpB;K08332//vacuolar protein 8	gi|460398822|ref|XP_004244950.1|//PREDICTED: U-box domain-containing protein 3-like [Solanum lycopersicum]
Solyc08g074705.1.1	3196	8.76539968939471	3742.77505091197	8.7380727490647	5.44494115576257e-28	Up	4.52595004374181e-30	NA	NA	NA	K10875//DNA repair and recombination protein RAD54 and RAD54-like protein [EC:3.6.4.-]	gi|971570642|ref|XP_015169470.1|//PREDICTED: SNF2 domain-containing protein CLASSY 3-like [Solanum tuberosum];gi|971546964|ref|XP_015163320.1|//PREDICTED: SNF2 domain-containing protein CLASSY 4-like [Solanum tuberosum]
Solyc04g049090.3.1	2058	1735.64587210466	20355.8819183353	3.55190120110754	2.20060651951729e-17	Up	5.44655855434427e-19	GO:0031224//intrinsic component of membrane;GO:0016021//integral component of membrane;GO:0005886//plasma membrane	GO:0005516//calmodulin binding	GO:0006952//defense response;GO:0009987//cellular process;GO:0009607//response to biotic stimulus	K08472//mlo protein	gi|970025856|ref|XP_015074236.1|//PREDICTED: MLO-like protein 12 isoform X1 [Solanum pennellii]
Solyc05g014590.3.1	911	10.0374641574824	50.1035415194538	2.31951774643192	0.0147808549864609	Up	0.00455138821541501	NA	NA	NA	K16190//glucuronokinase [EC:2.7.1.43];K13422//transcription factor MYC2	gi|723699146|ref|XP_010320974.1|//PREDICTED: transcription factor bHLH35 isoform X2 [Solanum lycopersicum];gi|460387015|ref|XP_004239187.1|//PREDICTED: transcription factor bHLH35 isoform X1 [Solanum lycopersicum]
Solyc06g011550.3.1	2436	991.003751855709	255.654609229353	-1.95469448255144	5.49919053387807e-09	Down	4.36811354841739e-10	NA	NA	NA	K01640//hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4];K10357//myosin V	gi|970035992|ref|XP_015079334.1|//PREDICTED: 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic-like isoform X1 [Solanum pennellii];gi|970035996|ref|XP_015079336.1|//PREDICTED: hydroxymethylglutaryl-CoA lyase, mitochondrial-like isoform X3 [Solanum pennellii];gi|970035994|ref|XP_015079335.1|//PREDICTED: hydroxymethylglutaryl-CoA lyase, mitochondrial-like isoform X2 [Solanum pennellii];gi|970035998|ref|XP_015079337.1|//PREDICTED: 3-hydroxymethyl-3-methylglutaryl-CoA lyase, cytoplasmic-like isoform X4 [Solanum pennellii];gi|970036000|ref|XP_015079338.1|//PREDICTED: hydroxymethylglutaryl-CoA lyase, mitochondrial-like isoform X5 [Solanum pennellii]
Solyc10g050920.1.1	1125	969.957199007039	401.030648586477	-1.27420858914736	0.00863317156879138	Down	0.00247590659200391	NA	NA	NA	K05747//Wiskott-Aldrich syndrome protein;K02184//formin 2	gi|659117577|ref|XP_008458675.1|//PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 3 [Cucumis melo]
Solyc05g054180.3.1	2107	436.938047130091	2055.98454950399	2.23432878136874	5.21480714802733e-13	Up	2.219811302761e-14	GO:0043231//intracellular membrane-bounded organelle	GO:0046914//transition metal ion binding;GO:0008270//zinc ion binding	GO:0046739//transport of virus in multicellular host;GO:0032501//multicellular organismal process	NA	gi|460388325|ref|XP_004239818.1|//PREDICTED: OBERON-like protein [Solanum lycopersicum];gi|970029906|ref|XP_015076266.1|//PREDICTED: OBERON-like protein isoform X1 [Solanum pennellii]
Solyc03g119330.3.1	2221	691.398235639367	1553.66293170073	1.16808471681508	0.00106033804733503	Up	0.000237022784772184	NA	NA	NA	K11866//STAM-binding protein [EC:3.4.19.12]	gi|460380024|ref|XP_004235758.1|//PREDICTED: AMSH-like ubiquitin thioesterase 1 [Solanum lycopersicum]
Solyc04g009050.3.1	2515	1152.40810110449	548.668264405898	-1.07064567116821	0.00378075790593372	Down	0.000978025192603995	NA	NA	NA	NA	gi|723689863|ref|XP_010319337.1|//PREDICTED: uncharacterized protein LOC101266410 isoform X2 [Solanum lycopersicum];gi|970024898|ref|XP_015073759.1|//PREDICTED: uncharacterized protein LOC107017960 isoform X1 [Solanum pennellii];gi|460382241|ref|XP_004236848.1|//PREDICTED: uncharacterized protein LOC101266410 isoform X1 [Solanum lycopersicum]
Solyc02g078840.3.1	1541	252.632393919126	691.890896670458	1.45350491788529	0.00768304401112108	Up	0.00217390991428573	NA	NA	NA	K19995//secretory carrier-associated membrane protein	gi|460374045|ref|XP_004232822.1|//PREDICTED: secretory carrier-associated membrane protein 2 [Solanum lycopersicum]
Solyc09g008550.3.1	1506	451.264249378732	144.52757597984	-1.6426277017	0.000573320099607164	Down	0.000120036491706182	GO:0044464//cell part	GO:0015932//nucleobase-containing compound transmembrane transporter activity	GO:0015931//nucleobase-containing compound transport	K03457//nucleobase:cation symporter-1, NCS1 family	gi|460402188|ref|XP_004246596.1|//PREDICTED: uncharacterized permease C29B12.14c [Solanum lycopersicum]
Solyc01g090270.3.1	2968	1099.82202567497	326.427221684317	-1.75243680641324	1.85380625652607e-05	Down	2.78681925371198e-06	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460367776|ref|XP_004229746.1|//PREDICTED: uncharacterized protein LOC101257405 [Solanum lycopersicum]
Solyc11g072770.2.1	974	3.77661035974358	129.705627181296	5.10200531516893	2.1594175785964e-11	Up	1.17356151393826e-12	NA	NA	NA	K18490//homeobox protein OTX2;K09326	gi|460412121|ref|XP_004251451.1|//PREDICTED: WUSCHEL-related homeobox 3-like [Solanum lycopersicum]
BGI_novel_G000405	724	20.9150464630047	1.55643220474553	-3.74822656073792	0.00133674406083649	Down	0.000305635458072575	NA	NA	NA	NA	gi|971546891|ref|XP_015163296.1|//PREDICTED: uncharacterized protein LOC107060215 [Solanum tuberosum]
Solyc01g102530.3.1	3395	342.04388635637	1509.03245292934	2.14137048364949	2.18704096835453e-12	Up	1.02553210757045e-13	GO:0016021//integral component of membrane	NA	NA	K08472//mlo protein	gi|460369061|ref|XP_004230383.1|//PREDICTED: uncharacterized protein LOC101246475 [Solanum lycopersicum]
Solyc07g006770.2.1	3422	101.861149776224	2744.63339609946	4.75193764739617	6.38967744811246e-21	Up	1.06224695909429e-22	NA	NA	NA	K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|723712456|ref|XP_004242680.2|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Solanum lycopersicum]
Solyc05g050130.3.1	2439	1064.43160354757	3419.97899580473	1.68390421415906	0.0155754416931283	Up	0.00482915327282844	GO:0030312//external encapsulating structure	GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0043167//ion binding	GO:0006026//aminoglycan catabolic process	K01183//chitinase [EC:3.2.1.14]	gi|460388877|ref|XP_004240090.1|//PREDICTED: acidic endochitinase [Solanum lycopersicum]
Solyc07g062620.3.1	1882	558.08397715092	2625.03068082566	2.23378015315038	3.87494839617618e-14	Up	1.4255904528947e-15	NA	GO:0004674//protein serine/threonine kinase activity;GO:0005524//ATP binding	GO:0006468//protein phosphorylation	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460397414|ref|XP_004244262.1|//PREDICTED: putative serine/threonine-protein kinase [Solanum lycopersicum];gi|970043077|ref|XP_015082939.1|//PREDICTED: putative serine/threonine-protein kinase [Solanum pennellii]
Solyc12g009160.2.1	4733	154.488412361848	539.909324429474	1.80521850221426	1.2933420152541e-06	Up	1.55183686711754e-07	NA	NA	NA	K12620//U6 snRNA-associated Sm-like protein LSm1	gi|565350893|ref|XP_006342396.1|//PREDICTED: von Willebrand factor A domain-containing protein DDB_G0286969-like isoform X1 [Solanum tuberosum];gi|460412617|ref|XP_004251694.1|//PREDICTED: uncharacterized protein LOC101250962 [Solanum lycopersicum]
Solyc11g065320.2.1	2846	3013.45090416723	655.165944360907	-2.20148428776278	0.000926649027789494	Down	0.000204651688148679	NA	NA	NA	NA	gi|723744821|ref|XP_010313260.1|//PREDICTED: zinc finger CCCH domain-containing protein 23 isoform X1 [Solanum lycopersicum];gi|460411033|ref|XP_004250919.1|//PREDICTED: zinc finger CCCH domain-containing protein 23 isoform X2 [Solanum lycopersicum]
Solyc10g049210.2.1	2012	662.96580812756	241.307361220582	-1.45806254007038	0.000125178982163381	Down	2.24013826362902e-05	NA	NA	NA	K16296//serine carboxypeptidase-like clade I [EC:3.4.16.-]	gi|460406660|ref|XP_004248779.1|//PREDICTED: serine carboxypeptidase-like 18 [Solanum lycopersicum]
Solyc07g006780.3.1	2847	1779.79022865979	604.321501524514	-1.5583190323141	0.000289516721262522	Down	5.63644638122168e-05	GO:0009536//plastid;GO:0009507//chloroplast	GO:0016301//kinase activity;GO:0016773//phosphotransferase activity, alcohol group as acceptor	GO:0016310//phosphorylation;GO:0044238//primary metabolic process;GO:0005975//carbohydrate metabolic process	K00875//D-ribulokinase [EC:2.7.1.47];K00864//glycerol kinase [EC:2.7.1.30]	gi|961658064|ref|NP_001304857.1|//FGGY carbohydrate kinase domain-containing protein [Solanum lycopersicum];gi|723712461|ref|XP_010323241.1|//PREDICTED: FGGY carbohydrate kinase domain-containing protein isoform X2 [Solanum lycopersicum];gi|970042452|ref|XP_015082616.1|//PREDICTED: FGGY carbohydrate kinase domain-containing protein [Solanum pennellii]
Solyc06g069520.3.1	653	921.341615681698	2169.0054567373	1.23522559842711	3.18067810365322e-05	Up	5.02093774003705e-06	NA	NA	NA	NA	gi|460391991|ref|XP_004241601.1|//PREDICTED: protein Asterix [Solanum lycopersicum]
Solyc08g023493.1.1	1574	368.565050036286	91.5068431444698	-2.00996772941198	1.58868640040134e-10	Down	9.88339645992934e-12	NA	NA	NA	K02993//small subunit ribosomal protein S7e;K17964//leucine-rich PPR motif-containing protein, mitochondrial	gi|723721671|ref|XP_010324814.1|//PREDICTED: stem-specific protein TSJT1-like [Solanum lycopersicum];gi|723721597|ref|XP_010324794.1|//PREDICTED: pentatricopeptide repeat-containing protein At1g09900 [Solanum lycopersicum]
Solyc10g005910.2.1	2324	315.358556971587	92.7358804344293	-1.76579353494016	0.000888611369793715	Down	0.0001952573440038	NA	NA	NA	K03977//GTPase	gi|723734877|ref|XP_010327200.1|//PREDICTED: uncharacterized protein LOC104649493 [Solanum lycopersicum]
Solyc01g112220.3.1	1846	222.119286082517	1927.81608793418	3.11756085704366	5.7405566490037e-09	Up	4.58765224968836e-10	NA	GO:0004713//protein tyrosine kinase activity;GO:0004674//protein serine/threonine kinase activity;GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding	GO:0006464//cellular protein modification process;GO:0006468//protein phosphorylation	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K00924;K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460370515|ref|XP_004231098.1|//PREDICTED: probable serine/threonine-protein kinase Cx32, chloroplastic [Solanum lycopersicum]
Solyc03g005500.1.1	390	0.833727297800011	20.6373472508618	4.62953815413635	0.000378398177510168	Up	7.56147543473986e-05	NA	NA	NA	K14516//ethylene-responsive transcription factor 1	gi|723679337|ref|XP_004234038.2|//PREDICTED: ethylene-responsive transcription factor ERF096-like [Solanum lycopersicum]
Solyc02g081510.2.1	747	46.1483600439687	340.545154446007	2.88349481907071	0.00010229243620599	Up	1.78824931342662e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|565362977|ref|XP_006348220.1|//PREDICTED: glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2-like, partial [Solanum tuberosum]
BGI_novel_G000495	1344	0.428285300352454	46.0711153818213	6.74914655402374	9.6406268963268e-08	Up	9.36464652297139e-09	NA	NA	NA	NA	gi|565348658|ref|XP_006341323.1|//PREDICTED: uncharacterized protein LOC102604349 [Solanum tuberosum]
Solyc01g099870.2.1	1819	86.4482699567005	2.28113783816655	-5.24401156276163	5.65537997890049e-09	Down	4.50904196170723e-10	GO:0016020//membrane	NA	GO:0006810//transport	K15382//solute carrier family 50 (sugar transporter)	gi|970000276|ref|XP_015087137.1|//PREDICTED: bidirectional sugar transporter SWEET16-like [Solanum pennellii]
Solyc02g071040.3.1	3775	1062.91457626232	525.893423071973	-1.01518329638925	2.25962879025917e-05	Down	3.46423632560608e-06	GO:0010287//plastoglobule;GO:0009535//chloroplast thylakoid membrane;GO:0009523//photosystem II;GO:0016021//integral component of membrane;GO:0009941//chloroplast envelope;GO:0009522//photosystem I	GO:0031409//pigment binding;GO:0046872//metal ion binding;GO:0004373//glycogen (starch) synthase activity;GO:0016168//chlorophyll binding	GO:0009768//photosynthesis, light harvesting in photosystem I;GO:0006073//cellular glucan metabolic process;GO:0009416//response to light stimulus;GO:0018298//protein-chromophore linkage	K00703//starch synthase [EC:2.4.1.21];K08912//light-harvesting complex II chlorophyll a/b binding protein 1	gi|473952979|gb|EMS50795.1|//Chlorophyll a-b binding protein, chloroplastic [Triticum urartu];gi|953514516|ref|NP_001234617.2|//starch synthase IV [Solanum lycopersicum];gi|891070292|gb|AKQ62851.1|//starch synthase [Camellia sinensis]
Solyc06g082290.3.1	2500	988.69089597836	2081.87309266276	1.07429067430522	0.000404938076848828	Up	8.15672195948662e-05	NA	NA	NA	K15113//solute carrier family 25 (mitochondrial iron transporter), member 28/37	gi|970032162|ref|XP_015077378.1|//PREDICTED: mitoferrin-like [Solanum pennellii];gi|460393807|ref|XP_004242500.1|//PREDICTED: mitoferrin-like [Solanum lycopersicum]
Solyc02g090410.3.1	1372	17.0346699492114	70.23389382167	2.04369342637798	0.000746916861926566	Up	0.000160837136996786	NA	NA	NA	K13944	gi|460372473|ref|XP_004232054.1|//PREDICTED: LOB domain-containing protein 36-like [Solanum lycopersicum]
Solyc01g103170.3.1	2530	471.907889304325	1036.74100246756	1.13547833101843	0.0188298997636982	Up	0.00599962662815314	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K03252//translation initiation factor 3 subunit C;K19995//secretory carrier-associated membrane protein	gi|460369147|ref|XP_004230425.1|//PREDICTED: uncharacterized protein LOC101259678 isoform X1 [Solanum lycopersicum]
Solyc05g049990.3.1	826	1369.46017771675	99.5103229850677	-3.7826173090875	4.7959238637361e-07	Down	5.26285964471413e-08	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K12823//ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]	gi|723702606|ref|XP_010321526.1|//PREDICTED: uncharacterized protein LOC101255495 isoform X1 [Solanum lycopersicum];gi|460388889|ref|XP_004240096.1|//PREDICTED: uncharacterized protein LOC101255495 isoform X2 [Solanum lycopersicum];gi|970027344|ref|XP_015074978.1|//PREDICTED: uncharacterized protein LOC107018901 isoform X2 [Solanum pennellii]
Solyc12g088320.2.1	688	405.365995485983	82.0978656811331	-2.30380845053065	0.00156658528690156	Down	0.000364259692101234	NA	NA	NA	K09377//cysteine and glycine-rich protein	gi|460414774|ref|XP_004252738.1|//PREDICTED: LIM domain-containing protein WLIM1-like [Solanum lycopersicum]
Solyc11g012450.2.1	2395	845.950077309127	172.994563602437	-2.28984582548443	5.19952101710964e-14	Down	1.94003300213462e-15	GO:0005887//integral component of plasma membrane	GO:0005355//glucose transmembrane transporter activity;GO:0005351//sugar:proton symporter activity	GO:0046323//glucose import;GO:0015992//proton transport;GO:1904659//glucose transmembrane transport	K08150//MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13	gi|665821200|ref|NP_001287931.1|//transporter; Itr [Solanum lycopersicum]
Solyc01g087190.3.1	1311	1388.91915590372	232.172794714094	-2.58069179085943	1.82793655900756e-15	Down	5.5530352452332e-17	NA	NA	NA	NA	gi|460367536|ref|XP_004229629.1|//PREDICTED: uncharacterized protein LOC101246564 [Solanum lycopersicum]
Solyc06g083790.3.1	1773	1967.1024215511	5405.0152882123	1.45822662197276	3.99072606886049e-07	Up	4.33315380892746e-08	GO:0043231//intracellular membrane-bounded organelle	GO:0043169//cation binding;GO:0032559//adenyl ribonucleotide binding;GO:0004774//succinate-CoA ligase activity	GO:0043648//dicarboxylic acid metabolic process;GO:0006732//coenzyme metabolic process;GO:0009060//aerobic respiration	K01900//succinyl-CoA synthetase beta subunit [EC:6.2.1.4 6.2.1.5]	gi|949474687|ref|NP_001303967.1|//succinyl-CoA ligase [ADP-forming] subunit beta, mitochondrial [Solanum lycopersicum]
Solyc12g010710.1.1	423	58.3961248001961	945.493281530568	4.01712266739741	1.14315961042792e-12	Up	5.13032716175345e-14	NA	NA	NA	NA	gi|763783021|gb|KJB50092.1|//hypothetical protein B456_008G153400 [Gossypium raimondii]
Solyc02g077420.3.1	1511	108.359657816448	411.674918424398	1.92567781131072	0.00536629437200773	Up	0.00144758731065379	NA	NA	NA	K00145//N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]	gi|460374288|ref|XP_004232943.1|//PREDICTED: phospholipase A1-II 1 [Solanum lycopersicum]
Solyc02g088620.3.1	1301	510.433484812859	4528.256375915	3.14916076224943	4.8919355033928e-20	Up	9.17192320786707e-22	NA	NA	NA	NA	gi|460372729|ref|XP_004232178.1|//PREDICTED: membrane-anchored ubiquitin-fold protein 2 [Solanum lycopersicum]
Solyc08g075860.3.1	2301	4224.51530317328	8942.20245100746	1.08184438451522	0.0322777699639296	Up	0.0112204593217388	NA	NA	NA	NA	gi|460400861|ref|XP_004245950.1|//PREDICTED: uncharacterized protein LOC101259778 [Solanum lycopersicum]
Solyc11g010480.2.1	2082	5105.842063319	1130.32000127914	-2.17541764496416	2.91904406916278e-08	Down	2.5743470507079e-09	NA	NA	NA	K17046//protein DEK;K11294//nucleolin	gi|460409423|ref|XP_004250138.1|//PREDICTED: probable serine/threonine-protein kinase kinX [Solanum lycopersicum]
Solyc01g102950.3.1	2304	4863.44290671569	256.106000378608	-4.24716502196473	4.82871519115804e-30	Down	3.52776270115915e-32	NA	NA	NA	NA	gi|971553713|ref|XP_015165008.1|//PREDICTED: uncharacterized protein LOC102595883 isoform X2 [Solanum tuberosum];gi|460369113|ref|XP_004230408.1|//PREDICTED: uncharacterized protein LOC101254642 [Solanum lycopersicum];gi|565365450|ref|XP_006349419.1|//PREDICTED: uncharacterized protein LOC102595883 isoform X1 [Solanum tuberosum]
Solyc06g008400.2.1	4167	8.69451064465007	56.7525330550143	2.70650805077837	0.000112282334141786	Up	1.98632756014954e-05	NA	GO:0032559//adenyl ribonucleotide binding	GO:0012501//programmed cell death;GO:0006950//response to stress	K13453;K13457//disease resistance protein RPM1	gi|460389721|ref|XP_004240498.1|//PREDICTED: putative late blight resistance protein homolog R1A-3 [Solanum lycopersicum]
Solyc05g010670.3.1	2959	12796.0392919893	4440.90207804748	-1.52677266224284	8.50159994938529e-05	Down	1.46224100335516e-05	GO:0044424//intracellular part	GO:0005515//protein binding;GO:0032559//adenyl ribonucleotide binding	GO:0044267//cellular protein metabolic process;GO:0050896//response to stimulus	K09487//heat shock protein 90kDa beta	gi|970029549|ref|XP_015076099.1|//PREDICTED: heat shock protein 90-5, chloroplastic [Solanum pennellii];gi|460386650|ref|XP_004239010.1|//PREDICTED: heat shock protein 81-1 [Solanum lycopersicum]
Solyc06g070960.2.1	4449	5.1192759121341	19.1650307054265	1.90446463951211	0.0440607780501588	Up	0.0161245235908923	NA	NA	NA	K05643//ATP-binding cassette, subfamily A (ABC1), member 3	gi|723708570|ref|XP_010322562.1|//PREDICTED: ABC transporter A family member 11-like [Solanum lycopersicum]
Solyc11g012520.1.1	381	81.1832716578853	8.26756388927948	-3.29564828702927	0.000300712329563041	Down	5.88130905478334e-05	NA	NA	NA	NA	gi|703163013|ref|XP_010113201.1|//hypothetical protein L484_000264 [Morus notabilis]
Solyc03g111575.1.1	2309	652.641911854944	2711.14561084312	2.05453905625404	0.00283893050630344	Up	0.000706981314768647	NA	NA	NA	K11000//callose synthase [EC:2.4.1.-]	gi|970017001|ref|XP_015069622.1|//PREDICTED: callose synthase 10 [Solanum pennellii]
Solyc12g006930.2.1	3240	6128.63178066469	2729.98107216811	-1.1666740791425	0.00148306708313038	Down	0.000342905364419925	NA	NA	NA	K10781//fatty acyl-ACP thioesterase B [EC:3.1.2.14 3.1.2.21]	gi|460412404|ref|XP_004251591.1|//PREDICTED: palmitoyl-acyl carrier protein thioesterase, chloroplastic [Solanum lycopersicum]
Solyc04g054930.3.1	1750	641.207517660193	1739.12081307869	1.43949491194393	0.0413273866297647	Up	0.0149331924105017	NA	GO:0019203//carbohydrate phosphatase activity	GO:0005991//trehalose metabolic process	K01087//trehalose 6-phosphate phosphatase [EC:3.1.3.12]	gi|460383385|ref|XP_004237406.1|//PREDICTED: probable trehalose-phosphate phosphatase J [Solanum lycopersicum]
Solyc01g097860.3.1	1963	5019.7939642894	513.79729847276	-3.28835694073725	3.94817409884183e-16	Down	1.11993457925251e-17	NA	NA	NA	K12177//COP9 signalosome complex subunit 3	gi|460368535|ref|XP_004230121.1|//PREDICTED: uncharacterized protein LOC101244036 [Solanum lycopersicum]
Solyc05g052050.1.1	705	392.488319577535	1393.32288568445	1.82780799850471	0.00232330959363035	Up	0.000563853763386282	GO:0043231//intracellular membrane-bounded organelle	GO:0001071//nucleic acid binding transcription factor activity;GO:0003676//nucleic acid binding	GO:0050794//regulation of cellular process;GO:0050896//response to stimulus;GO:0006351//transcription, DNA-templated	K13432//pathogenesis-related genes transcriptional activator PTI4;K09286//EREBP-like factor	gi|460388658|ref|XP_004239983.1|//PREDICTED: ethylene-responsive transcription factor 1 [Solanum lycopersicum]
Solyc11g006290.2.1	950	146.732264979464	11.7357239588859	-3.64420739294846	2.15875288975935e-05	Down	3.29670888226632e-06	NA	NA	NA	K10258//very-long-chain enoyl-CoA reductase [EC:1.3.1.93]	gi|460408993|ref|XP_004249925.1|//PREDICTED: 3-oxo-5-alpha-steroid 4-dehydrogenase 1-like [Solanum lycopersicum]
Solyc09g090040.3.1	903	503.548726074914	1240.66305856188	1.30090806601862	0.00483617455889104	Up	0.00128781985420895	NA	NA	NA	K00384//thioredoxin reductase (NADPH) [EC:1.8.1.9];K11426//SET and MYND domain-containing protein	gi|723733163|ref|XP_004247725.2|//PREDICTED: uncharacterized protein LOC101250545 [Solanum lycopersicum]
Solyc04g051610.3.1	1725	362.521257565258	17.6339018527677	-4.3616419543657	2.3211753530181e-14	Down	8.21945946536153e-16	NA	NA	NA	K09839//violaxanthin de-epoxidase [EC:1.23.5.1]	gi|460383527|ref|XP_004237473.1|//PREDICTED: violaxanthin de-epoxidase, chloroplastic [Solanum lycopersicum]
Solyc01g103030.3.1	2059	355.963772200744	1817.64175627276	2.35226555787843	6.12110913566423e-06	Up	8.33929248950825e-07	NA	NA	NA	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460369125|ref|XP_004230414.1|//PREDICTED: protein NRT1/ PTR FAMILY 4.3 [Solanum lycopersicum]
Solyc11g073160.2.1	1818	541.72497010751	31.0568621449016	-4.12457661314725	2.44744703038143e-16	Down	6.77819123144998e-18	NA	GO:0046914//transition metal ion binding;GO:0003933//GTP cyclohydrolase activity;GO:0016830//carbon-carbon lyase activity	GO:0006771//riboflavin metabolic process	K14652//3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]	gi|460411836|ref|XP_004251310.1|//PREDICTED: monofunctional riboflavin biosynthesis protein RIBA 3, chloroplastic isoform X1 [Solanum lycopersicum]
Solyc03g116930.3.1	1918	146.758426126371	8.84273193488957	-4.05280737305172	2.79986459876905e-13	Down	1.14799875452734e-14	NA	NA	NA	K11267//sister chromatid cohesion protein PDS5	gi|723688388|ref|XP_010319093.1|//PREDICTED: uncharacterized protein LOC101246231 [Solanum lycopersicum]
Solyc12g088360.2.1	1674	204.48139514862	4064.73624975106	4.31312025272311	3.73967519247299e-56	Up	2.92728414499526e-59	NA	GO:0003824//catalytic activity	NA	K08332//vacuolar protein 8	gi|460414776|ref|XP_004252739.1|//PREDICTED: U-box domain-containing protein 4-like [Solanum lycopersicum]
Solyc12g099600.2.1	2215	478.839806404608	84.3288016330843	-2.50544573179949	1.57781446474822e-19	Down	3.0935232162575e-21	NA	NA	NA	K01102//pyruvate dehydrogenase phosphatase [EC:3.1.3.43]	gi|460415098|ref|XP_004252897.1|//PREDICTED: probable protein phosphatase 2C 40 [Solanum lycopersicum]
Solyc01g006560.3.1	1808	6059.28266785417	16560.6364451936	1.45053920388687	0.0176344372533399	Up	0.00556219651251537	GO:0009534//chloroplast thylakoid;GO:0009570//chloroplast stroma	GO:0016702//oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen;GO:0046872//metal ion binding;GO:0046914//transition metal ion binding;GO:0016165//linoleate 13S-lipoxygenase activity	GO:0006633//fatty acid biosynthetic process;GO:0055114//oxidation-reduction process;GO:0031408//oxylipin biosynthetic process	K00454//lipoxygenase [EC:1.13.11.12]	gi|568214619|ref|NP_001274843.1|//linoleate 13S-lipoxygenase 2-1, chloroplastic [Solanum tuberosum];gi|350536681|ref|NP_001234259.1|//lipoxygenase [Solanum lycopersicum]
Solyc03g098320.3.1	2051	1402.54989939512	18.8377579379636	-6.21828102297527	1.20840234307947e-36	Down	5.23837846845483e-39	NA	NA	NA	K12133//MYB-related transcription factor LHY	gi|460379277|ref|XP_004235390.1|//PREDICTED: protein REVEILLE 7 [Solanum lycopersicum]
Solyc01g093990.3.1	1588	401.479697265627	66.6098064587272	-2.59152053769622	1.27942877866e-06	Down	1.53418904910885e-07	NA	GO:0016616//oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;GO:0005488//binding	GO:0008152//metabolic process	K15919//hydroxypyruvate reductase 2	gi|460368026|ref|XP_004229871.1|//PREDICTED: glyoxylate/hydroxypyruvate reductase HPR3-like [Solanum lycopersicum]
Solyc12g098610.2.1	1003	72.2182152955451	4.2116568979189	-4.09990295059048	0.000186973381885982	Down	3.49024413480319e-05	GO:0030312//external encapsulating structure;GO:0005576//extracellular region	GO:0016758//transferase activity, transferring hexosyl groups;GO:0016798//hydrolase activity, acting on glycosyl bonds	GO:0044042//glucan metabolic process	K08235//xyloglucan:xyloglucosyl transferase [EC:2.4.1.207]	gi|565366446|ref|XP_006349901.1|//PREDICTED: xyloglucan endotransglucosylase/hydrolase 2-like [Solanum tuberosum]
Solyc07g066470.3.1	1510	8218.68860448124	2848.32368888288	-1.52879510585474	0.000861513199834711	Down	0.000188596504496394	NA	GO:0016765//transferase activity, transferring alkyl or aryl (other than methyl) groups	GO:0018130//heterocycle biosynthetic process;GO:0006778//porphyrin-containing compound metabolic process;GO:0018065//protein-cofactor linkage	K01749//hydroxymethylbilane synthase [EC:2.5.1.61]	gi|460396846|ref|XP_004243981.1|//PREDICTED: porphobilinogen deaminase, chloroplastic [Solanum lycopersicum]
Solyc08g066900.1.1	836	501.111847417773	41.8990197048653	-3.5801442514903	0.00194030140282341	Down	0.000462293371360043	NA	NA	NA	NA	gi|723722784|ref|XP_010325109.1|//PREDICTED: bark storage protein A [Solanum lycopersicum]
Solyc10g018990.2.1	867	16.2194943297405	1.8058905198097	-3.16694650305881	0.005640935979455	Down	0.00153323535780716	GO:0009532//plastid stroma;GO:0009509//chromoplast	GO:0032559//adenyl ribonucleotide binding;GO:0016462//pyrophosphatase activity	NA	NA	gi|813424164|ref|YP_009132004.1|//Ycf2 (chloroplast) [Solanum habrochaites]
Solyc05g026540.3.1	2288	1362.20181461059	4528.92861801439	1.73322934163215	0.000117671901095518	Up	2.0927984197054e-05	NA	NA	NA	K18171//COX assembly mitochondrial protein 1;K18636//microtubule-binding protein TANGLED1	gi|460387332|ref|XP_004239332.1|//PREDICTED: uncharacterized protein LOC101267991 [Solanum lycopersicum]
Solyc04g056580.3.1	993	2148.59229274142	375.859564318935	-2.51512612839384	4.46650161012288e-18	Down	1.00557886257426e-19	NA	NA	NA	NA	gi|460383319|ref|XP_004237375.1|//PREDICTED: uncharacterized protein LOC101253079 [Solanum lycopersicum]
Solyc11g012640.1.1	537	933.475340757229	102.566838812699	-3.18604754751855	5.57666245616691e-10	Down	3.79981324357877e-11	NA	NA	NA	NA	gi|460409728|ref|XP_004250290.1|//PREDICTED: uncharacterized protein LOC101263778 [Solanum lycopersicum]
Solyc10g008060.3.1	1812	193.215294545838	72.1842227095716	-1.42045385249115	8.46529007964172e-05	Down	1.45400539313363e-05	NA	NA	NA	NA	gi|460405449|ref|XP_004248188.1|//PREDICTED: uncharacterized protein LOC101244715 [Solanum lycopersicum]
Solyc03g123920.3.1	1747	576.619746797857	283.292516508053	-1.02532775210836	0.0486452568938089	Down	0.0181050726884107	NA	NA	NA	NA	gi|460379509|ref|XP_004235504.1|//PREDICTED: uncharacterized membrane protein At1g16860-like [Solanum lycopersicum]
Solyc02g079500.4.1	1324	340.056830689954	1095.95812852975	1.68834490418921	0.000175226666923838	Up	3.25594503733164e-05	NA	GO:0016209//antioxidant activity;GO:0005506//iron ion binding;GO:0003824//catalytic activity	GO:0042743//hydrogen peroxide metabolic process;GO:0006950//response to stress	K00430//peroxidase [EC:1.11.1.7]	gi|823270909|ref|NP_001296245.1|//suberization-associated anionic peroxidase 1 precursor [Solanum lycopersicum]
Solyc03g113370.3.1	6690	338.464929810372	134.996097679788	-1.32608865205419	0.0195162693943034	Down	0.00625221433209334	NA	NA	NA	K11855//ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12]	gi|723687618|ref|XP_010318961.1|//PREDICTED: uncharacterized protein LOC101250879 [Solanum lycopersicum]
Solyc04g076990.3.1	1838	1647.03236078862	6300.5015112375	1.93559776839577	1.70660052044547e-05	Up	2.54132588309962e-06	NA	GO:0004672//protein kinase activity	NA	K00924	gi|460384688|ref|XP_004238042.1|//PREDICTED: receptor-like protein kinase HAIKU2 [Solanum lycopersicum]
Solyc11g042630.2.1	930	275.191844690033	0.638935633168965	-8.75055140070397	5.2002594423615e-14	Down	1.94224689177211e-15	NA	NA	NA	NA	gi|723743865|ref|XP_004250717.2|//PREDICTED: uncharacterized protein LOC101267284 [Solanum lycopersicum]
Solyc10g008160.3.1	1229	204.582184291829	1.50870402680874	-7.08322689568401	1.029198081977e-11	Down	5.3125362863712e-13	GO:0005634//nucleus	GO:0003677//DNA binding	GO:0006355//regulation of transcription, DNA-templated	K14491//two-component response regulator ARR-B family	gi|525314330|ref|NP_001266252.1|//golden2-like protein [Solanum lycopersicum]
Solyc09g090960.3.1	561	1897.54380228631	337.42129029657	-2.49151027728224	1.46710922267722e-13	Down	5.77818551732455e-15	GO:0032991//macromolecular complex	GO:0005488//binding	NA	K13201//nucleolysin TIA-1/TIAR;K11294//nucleolin	gi|970053663|ref|XP_015088464.1|//PREDICTED: 28 kDa ribonucleoprotein, chloroplastic [Solanum pennellii]
Solyc08g079530.3.1	1799	417.337263287706	42.3629530298216	-3.30033867687859	1.70121572936135e-14	Down	5.90999351336207e-16	NA	GO:0003913//DNA photolyase activity	GO:0006259//DNA metabolic process	K01669//deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]	gi|723724759|ref|XP_010325452.1|//PREDICTED: deoxyribodipyrimidine photo-lyase isoform X1 [Solanum lycopersicum];gi|460400361|ref|XP_004245703.1|//PREDICTED: deoxyribodipyrimidine photo-lyase isoform X2 [Solanum lycopersicum]
Solyc11g013730.2.1	954	225.700394566469	39.2659258237895	-2.52305912172079	0.0106193816403685	Down	0.00312707301919304	NA	NA	NA	K07466//replication factor A1	gi|970022454|ref|XP_015072525.1|//PREDICTED: replication protein A 70 kDa DNA-binding subunit B-like [Solanum pennellii]
Solyc03g006260.3.1	2476	44.3024729840074	7.95680305159422	-2.47712643824673	0.0107377338574998	Down	0.00316594236640762	NA	NA	NA	NA	gi|723678817|ref|XP_004234097.2|//PREDICTED: uncharacterized protein LOC101254062 isoform X1 [Solanum lycopersicum]
Solyc03g007470.3.1	770	458.367769801023	1845.91131773522	2.00975573446307	3.03082542257717e-10	Up	1.97588849861617e-11	NA	GO:0016879//ligase activity, forming carbon-nitrogen bonds;GO:0032559//adenyl ribonucleotide binding	GO:0006464//cellular protein modification process	K06689//ubiquitin-conjugating enzyme E2 D [EC:2.3.2.23]	gi|763772336|gb|KJB39459.1|//hypothetical protein B456_007G014500 [Gossypium raimondii]
Solyc03g118860.3.1	1556	300.834764269106	121.744927376932	-1.30510963130585	0.000153805651510367	Down	2.82351585540688e-05	NA	GO:0008375//acetylglucosaminyltransferase activity	GO:0006807//nitrogen compound metabolic process;GO:0005975//carbohydrate metabolic process;GO:0044237//cellular metabolic process	K02563//UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase [EC:2.4.1.227]	gi|460380108|ref|XP_004235800.1|//PREDICTED: uncharacterized protein LOC101252862 [Solanum lycopersicum]
Solyc06g051250.1.1	477	55.6330505713699	14.7661410635765	-1.91364937018823	0.000364938921404144	Down	7.26531526472168e-05	NA	NA	NA	K19041//E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27];K10664//E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:2.3.2.27]	gi|698500514|ref|XP_009796011.1|//PREDICTED: RING-H2 finger protein ATL66-like [Nicotiana sylvestris]
Solyc11g012690.2.1	1026	823.516857233329	68.0019312790768	-3.59815055683616	2.49789630587153e-05	Down	3.8583876142581e-06	NA	NA	NA	K00430//peroxidase [EC:1.11.1.7];K07213//copper chaperone;K10752//histone-binding protein RBBP4	gi|723742266|ref|XP_010312763.1|//PREDICTED: uncharacterized protein LOC101264884 isoform X1 [Solanum lycopersicum]
Solyc03g098660.3.1	1234	344.225318495974	1362.34899962069	1.98467121330964	1.27172008041186e-08	Up	1.06750917738464e-09	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K03868//RING-box protein 1	gi|460379313|ref|XP_004235408.1|//PREDICTED: putative GEM-like protein 8 [Solanum lycopersicum]
Solyc01g097380.2.1	1726	11.9300912932517	304.524334536974	4.67388053028896	3.06795983309481e-12	Up	1.4683392074302e-13	NA	GO:0003824//catalytic activity;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process;GO:0009820//alkaloid metabolic process;GO:0055114//oxidation-reduction process	K05275//pyridoxine 4-dehydrogenase [EC:1.1.1.65]	gi|969997025|ref|XP_015065711.1|//PREDICTED: perakine reductase-like [Solanum pennellii]
Solyc03g115040.3.1	1482	5.60322238985553	27.0920251050613	2.27353957889899	0.0250801844378838	Up	0.00838093981980127	NA	NA	NA	K00924;K02882//large subunit ribosomal protein L18Ae	gi|460380623|ref|XP_004236054.1|//PREDICTED: basic 7S globulin-like [Solanum lycopersicum]
Solyc02g085705.1.1	2767	34.9668256710657	88.6061926801607	1.3414206996989	0.0238952163666471	Up	0.0079199442348377	NA	GO:0016740//transferase activity	GO:0008299//isoprenoid biosynthetic process	K13789//geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29];K01213//galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]	gi|970056577|ref|XP_015054899.1|//PREDICTED: exopolygalacturonase-like [Solanum pennellii];gi|460373131|ref|XP_004232376.1|//PREDICTED: geranylgeranyl pyrophosphate synthase, chloroplastic-like [Solanum lycopersicum]
Solyc01g073810.2.1	797	0.440179814880387	16.3779514763946	5.21751811867908	0.000340776674226587	Up	6.74617905478382e-05	NA	NA	NA	K20393//PRA1 family protein 3	gi|723659523|ref|XP_004229343.2|//PREDICTED: uncharacterized protein LOC101249296 [Solanum lycopersicum]
Solyc03g031755.1.1	1244	338.956776583734	707.077070931354	1.06076616229066	0.0296238812790617	Up	0.010144423636154	GO:0016021//integral component of membrane;GO:0000813//ESCRT I complex	GO:0032403//protein complex binding	GO:0043328//protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway	K12184//ESCRT-I complex subunit VPS28	gi|460377404|ref|XP_004234483.1|//PREDICTED: vacuolar protein sorting-associated protein 28 homolog 2-like [Solanum lycopersicum]
Solyc09g065990.3.1	3204	202.050133180011	625.081505947571	1.62933101620568	2.60646144303954e-06	Up	3.31879837834467e-07	NA	GO:0046914//transition metal ion binding	NA	K16277//E3 ubiquitin-protein ligase DRIP [EC:2.3.2.27]	gi|460403484|ref|XP_004247220.1|//PREDICTED: E3 ubiquitin protein ligase DRIP2 isoform X1 [Solanum lycopersicum];gi|723730737|ref|XP_010326435.1|//PREDICTED: E3 ubiquitin protein ligase DRIP2 isoform X2 [Solanum lycopersicum]
Solyc03g118720.3.1	809	191.21591595596	871.418806988908	2.18816363809348	2.0374060008064e-17	Up	5.02744435863216e-19	NA	NA	NA	K12486//stromal membrane-associated protein;K01537//Ca2+-transporting ATPase [EC:3.6.3.8]	gi|460380134|ref|XP_004235813.1|//PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD13 [Solanum lycopersicum]
Solyc06g076080.2.1	641	47.4561335087173	1478.13672930598	4.96104135468508	2.24455490839685e-16	Up	6.18281674856595e-18	NA	NA	NA	NA	NA
Solyc02g084110.1.1	459	1.09688633169523	30.646243486941	4.80422430928918	4.78939888151354e-06	Up	6.37146436861556e-07	NA	NA	NA	NA	gi|565347858|ref|XP_006340938.1|//PREDICTED: zinc finger CCCH domain-containing protein 45-like [Solanum tuberosum]
Solyc08g065420.3.1	3454	377.15029439008	28.1775653776155	-3.74252068288139	5.06526064534438e-08	Down	4.67103579714551e-09	NA	NA	NA	K16670//homeobox protein Meis2;K15613//homeobox protein Meis1	gi|970043536|ref|XP_015083171.1|//PREDICTED: homeobox protein ATH1 [Solanum pennellii]
Solyc05g013680.3.1	1580	277.268738499188	27.7144152299319	-3.32257649213325	6.90288926888829e-21	Down	1.15785752609204e-22	NA	NA	NA	K01206//alpha-L-fucosidase [EC:3.2.1.51]	gi|460386911|ref|XP_004239137.1|//PREDICTED: GDSL esterase/lipase At3g26430-like isoform X2 [Solanum lycopersicum]
Solyc10g050440.2.1	761	3540.18750878957	593.144643914249	-2.57736990822221	8.29006025088393e-12	Down	4.21177580213016e-13	NA	NA	NA	NA	gi|460406596|ref|XP_004248748.1|//PREDICTED: uncharacterized protein LOC101250638 [Solanum lycopersicum]
Solyc07g008280.3.1	1129	180.510212637557	1121.76751470251	2.63562134250818	6.5673617928772e-05	Up	1.10427050274598e-05	NA	NA	NA	NA	gi|460394386|ref|XP_004242784.1|//PREDICTED: uncharacterized protein LOC101249561 [Solanum lycopersicum]
Solyc09g010530.3.1	2599	1161.72660396498	3.64102347138369	-8.31771083438124	6.57653480707846e-21	Down	1.10066502474215e-22	NA	NA	NA	NA	gi|460401817|ref|XP_004246412.1|//PREDICTED: cation/H(+) antiporter 20 [Solanum lycopersicum]
Solyc11g008980.1.1	615	2965.5003213972	581.235495146321	-2.35108081423318	2.72225419743697e-12	Down	1.28867706528439e-13	NA	NA	NA	NA	gi|970064227|ref|XP_015059068.1|//PREDICTED: protein TIC 20-II, chloroplastic [Solanum pennellii]
Solyc03g115610.3.1	3878	179.083486391223	5036.76052090624	4.81379192280415	5.02710819116888e-17	Up	1.28357280115949e-18	NA	NA	NA	K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1];K13415//protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1]	gi|460380450|ref|XP_004235969.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g74360 [Solanum lycopersicum]
Solyc02g066920.3.1	836	1547.27571007408	193.879627534875	-2.99649717332116	1.1429032786909e-05	Down	1.63886570490678e-06	NA	NA	NA	K01126//glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]	gi|460375182|ref|XP_004233386.1|//PREDICTED: uncharacterized protein LOC101249885 [Solanum lycopersicum]
Solyc06g083580.3.1	1855	876.156952357333	415.744543232833	-1.07549200556872	0.0240025186330237	Down	0.00796177178005359	GO:0005681//spliceosomal complex	GO:0003824//catalytic activity	GO:0000398//mRNA splicing, via spliceosome	K01728//pectate lyase [EC:4.2.2.2];K12859//U5 snRNP protein, DIM1 family	gi|697111735|ref|XP_009609746.1|//PREDICTED: probable pectate lyase 8 [Nicotiana tomentosiformis];gi|460393590|ref|XP_004242392.1|//PREDICTED: thioredoxin-like protein 4B isoform X1 [Solanum lycopersicum];gi|970414520|ref|NP_001305078.1|//probable pectate lyase 8 precursor [Solanum lycopersicum]
Solyc10g077120.2.1	585	52778.0781232676	4984.78720954357	-3.40433499156651	1.7845726579142e-21	Down	2.8403627737042e-23	NA	NA	NA	K02723//photosystem II PsbY protein	gi|460407331|ref|XP_004249106.1|//PREDICTED: photosystem II core complex proteins psbY, chloroplastic [Solanum lycopersicum]
BGI_novel_G000065	1712	5.44408035172135	37.6407126497632	2.7895336772786	0.00788600909191099	Up	0.00223811216735539	NA	NA	NA	NA	gi|971534089|ref|XP_015163412.1|//PREDICTED: uncharacterized protein LOC107060260 [Solanum tuberosum]
Solyc01g066520.3.1	2129	367.91839485991	1077.29617655537	1.54995722473645	0.000400108243893139	Up	8.05197707163805e-05	NA	GO:0016747//transferase activity, transferring acyl groups other than amino-acyl groups	GO:0008152//metabolic process	K09699//2-oxoisovalerate dehydrogenase E2 component (dihydrolipoyl transacylase) [EC:2.3.1.168]	gi|460366778|ref|XP_004229256.1|//PREDICTED: lipoamide acyltransferase component of branched-chain alpha-keto acid dehydrogenase complex, mitochondrial [Solanum lycopersicum]
Solyc03g118630.3.1	1071	135.358774442892	29.4425094423839	-2.2008158658144	0.00178795791382128	Down	0.000422064166849194	NA	NA	NA	NA	gi|565349060|ref|XP_006341516.1|//PREDICTED: uncharacterized protein At3g17950 [Solanum tuberosum]
Solyc02g021140.3.1	1068	1780.25530594539	669.534074730049	-1.41085476665047	4.8804704313358e-05	Down	7.95887063407414e-06	NA	GO:0016209//antioxidant activity;GO:0043169//cation binding;GO:0003824//catalytic activity	GO:0072593//reactive oxygen species metabolic process	K04564//superoxide dismutase, Fe-Mn family [EC:1.15.1.1]	gi|460371409|ref|XP_004231531.1|//PREDICTED: superoxide dismutase [Fe] 3, chloroplastic [Solanum lycopersicum]
Solyc05g039990.3.1	1565	79.1934577393603	26.4870268121417	-1.58009534332971	0.0071846543379825	Down	0.00201710214975713	NA	NA	NA	NA	NA
Solyc12g097060.1.1	675	20.23867216718	3.178892128405	-2.67051867337383	0.00965843729156068	Down	0.00281206402580813	NA	NA	NA	NA	gi|460415328|ref|XP_004253011.1|//PREDICTED: centrosomal protein of 290 kDa-like [Solanum lycopersicum]
Solyc04g015690.3.1	3582	300.349261545643	1252.02747183909	2.0595531961661	2.08829333349617e-05	Up	3.18054516201929e-06	NA	GO:0046872//metal ion binding;GO:0016787//hydrolase activity;GO:0003824//catalytic activity	NA	K01408//insulysin [EC:3.4.24.56]	gi|590635916|ref|XP_007028741.1|//Insulinase (Peptidase family M16) family protein isoform 2 [Theobroma cacao];gi|698467810|ref|XP_009783214.1|//PREDICTED: zinc-metallopeptidase, peroxisomal-like isoform X1 [Nicotiana sylvestris];gi|460381765|ref|XP_004236612.1|//PREDICTED: zinc-metallopeptidase, peroxisomal-like [Solanum lycopersicum]
Solyc05g056170.3.1	3674	1654.19889040144	4083.35205663512	1.30362125311056	0.0235962916341112	Up	0.00779887870581722	GO:0044424//intracellular part	GO:0016840//carbon-nitrogen lyase activity	GO:0006558//L-phenylalanine metabolic process	K10775//phenylalanine ammonia-lyase [EC:4.3.1.24]	gi|460388001|ref|XP_004239660.1|//PREDICTED: phenylalanine ammonia-lyase-like [Solanum lycopersicum]
Solyc04g082740.3.1	984	596.866660275699	129.272431859129	-2.20699402574649	1.01929912552606e-06	Down	1.20060579866645e-07	NA	NA	NA	NA	gi|460385531|ref|XP_004238457.1|//PREDICTED: uncharacterized protein LOC101267233 [Solanum lycopersicum]
Solyc01g106320.2.1	1867	899.799290854222	3294.32440882486	1.87230749653448	9.83199608863795e-07	Up	1.15112195148396e-07	NA	NA	NA	NA	gi|460369446|ref|XP_004230573.1|//PREDICTED: uncharacterized protein LOC101252825 [Solanum lycopersicum]
Solyc03g123510.3.1	2183	29.3576105562722	3.78056282019763	-2.95706161810462	0.00132841402736012	Down	0.000303433769183793	NA	NA	NA	K20131//Rab5 GDP/GTP exchange factor	gi|970016732|ref|XP_015069476.1|//PREDICTED: uncharacterized protein LOC107014130 [Solanum pennellii]
Solyc03g097490.3.1	1632	824.482378967644	2516.44742460386	1.60982789086106	0.00509368581639481	Up	0.00136246792226216	NA	NA	NA	K17046//protein DEK	gi|460379069|ref|XP_004235287.1|//PREDICTED: protein DEK-like isoform X1 [Solanum lycopersicum]
Solyc06g072610.3.1	1713	465.833637292909	2984.24723482217	2.67948033924879	1.89425395638455e-13	Up	7.59735074202244e-15	NA	NA	NA	K16675//palmitoyltransferase ZDHHC9/14/18 [EC:2.3.1.225]	gi|460391692|ref|XP_004241453.1|//PREDICTED: probable protein S-acyltransferase 7 [Solanum lycopersicum]
Solyc03g120690.3.1	606	0.358885816161827	5.80498250767957	4.01569490839394	0.0134037291777601	Up	0.00406924451429663	GO:0015630//microtubule cytoskeleton	NA	GO:0009987//cellular process	K10418//dynein light chain LC8-type	gi|970016496|ref|XP_015069356.1|//PREDICTED: dynein light chain 1, cytoplasmic-like [Solanum pennellii]
Solyc08g066920.2.1	1915	15.0776247772277	1.5769607791948	-3.257190490271	0.017836352103654	Down	0.00564220906635995	GO:0031224//intrinsic component of membrane;GO:0009941//chloroplast envelope	GO:0032559//adenyl ribonucleotide binding	GO:0051234//establishment of localization	K03301//ATP:ADP antiporter, AAA family	gi|723722788|ref|XP_010325110.1|//PREDICTED: plastidic ATP/ADP-transporter [Solanum lycopersicum]
Solyc02g068430.3.1	1470	1822.34801413269	8793.72807439781	2.27067642406359	8.59157289270362e-10	Up	6.03344391302133e-11	NA	GO:0016779//nucleotidyltransferase activity	GO:0009058//biosynthetic process	K00968//choline-phosphate cytidylyltransferase [EC:2.7.7.15]	gi|970010784|ref|XP_015066294.1|//PREDICTED: choline-phosphate cytidylyltransferase 1-like [Solanum pennellii];gi|460374936|ref|XP_004233264.1|//PREDICTED: choline-phosphate cytidylyltransferase 1 [Solanum lycopersicum]
Solyc05g012110.3.1	1287	852.556307230418	373.906751140688	-1.18911660005834	0.0122145962011982	Down	0.00365691205785089	NA	NA	GO:0006007//glucose catabolic process	K01057//6-phosphogluconolactonase [EC:3.1.1.31]	gi|460386704|ref|XP_004239036.1|//PREDICTED: probable 6-phosphogluconolactonase 1 [Solanum lycopersicum]
Solyc03g097320.3.1	2496	692.322202656319	33.9052853651535	-4.35186152367048	4.23554694589802e-28	Down	3.45752490365165e-30	NA	NA	GO:0006351//transcription, DNA-templated	K03086//RNA polymerase primary sigma factor	gi|460379093|ref|XP_004235299.1|//PREDICTED: RNA polymerase sigma factor sigA [Solanum lycopersicum]
Solyc04g078950.1.1	918	310.572725126687	72.3865907883214	-2.10113676008816	3.60587285243994e-05	Down	5.75127849097604e-06	NA	NA	NA	NA	gi|460384927|ref|XP_004238158.1|//PREDICTED: protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1-like [Solanum lycopersicum]
Solyc06g050140.1.1	273	21.2330137930161	929.161222431286	5.45154788043935	2.90587735416196e-14	Up	1.04524066153507e-15	NA	NA	NA	NA	NA
Solyc02g036480.1.1	771	606.770877080502	4232.73026900302	2.80236480780618	0.000382832457633447	Up	7.66007392491556e-05	NA	NA	NA	NA	gi|723668327|ref|XP_010315726.1|//PREDICTED: protein YLS9-like [Solanum lycopersicum]
Solyc02g083850.3.1	3464	1185.86584737503	8326.47478377965	2.81176501236213	1.7813526425497e-07	Up	1.81468494561217e-08	GO:0031012//extracellular matrix	GO:0046872//metal ion binding;GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process;GO:0023052//signaling	K13412//calcium-dependent protein kinase [EC:2.7.11.1]	gi|460373368|ref|XP_004232492.1|//PREDICTED: calcium-dependent protein kinase 28-like [Solanum lycopersicum]
Solyc10g047810.2.1	2076	0.759266445015904	12.6247629459952	4.05550623735771	0.00270690491602988	Up	0.000671176811593513	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723737321|ref|XP_010327615.1|//PREDICTED: L-type lectin-domain containing receptor kinase IX.1-like [Solanum lycopersicum]
Solyc11g020290.2.1	1726	3.1182592686912	49.6280233554114	3.99234220289802	0.00050837473012912	Up	0.000104866026410264	GO:0043231//intracellular membrane-bounded organelle;GO:0005634//nucleus	NA	NA	K01595//phosphoenolpyruvate carboxylase [EC:4.1.1.31];K10752//histone-binding protein RBBP4	gi|970004273|ref|XP_015062931.1|//PREDICTED: WD-40 repeat-containing protein MSI1 [Solanum pennellii];gi|723742881|ref|XP_010312862.1|//PREDICTED: WD-40 repeat-containing protein MSI1-like [Solanum lycopersicum];gi|460382446|ref|XP_004236950.1|//PREDICTED: phosphoenolpyruvate carboxylase 4 [Solanum lycopersicum]
Solyc08g013770.3.1	1489	13.3154122376529	1.58148602184022	-3.07374438467896	0.0275229581580849	Down	0.00932739024716411	NA	NA	NA	NA	gi|970045295|ref|XP_015084076.1|//PREDICTED: F-box protein At5g03100-like [Solanum pennellii]
Solyc08g062330.3.1	1662	205.409219766106	1276.46402766501	2.6355800379861	4.51874398672004e-06	Up	5.98277122440345e-07	NA	NA	NA	K19626//inversin;K15502//serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A	gi|460399061|ref|XP_004245062.1|//PREDICTED: homeobox protein Wariai-like [Solanum lycopersicum]
Solyc01g016410.3.1	1371	125.233666853896	290.186733549046	1.21235910787329	0.0116895076367667	Up	0.00348097049761925	NA	NA	NA	K11982//E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27];K19041//E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27]	gi|460364892|ref|XP_004228343.1|//PREDICTED: E3 ubiquitin-protein ligase AIP2 [Solanum lycopersicum]
Solyc06g008890.3.1	1338	112.559116760394	963.760238659572	3.09799136875386	8.27148064532917e-16	Up	2.42027445451893e-17	NA	GO:0000166//nucleotide binding;GO:0004672//protein kinase activity	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460389784|ref|XP_004240528.1|//PREDICTED: probable receptor-like protein kinase At5g20050 [Solanum lycopersicum]
Solyc10g075100.2.1	539	39654.4400825585	3535.46701996034	-3.48750970608992	1.44395480563821e-09	Down	1.04846576762458e-10	NA	GO:0008289//lipid binding;GO:0005488//binding	GO:0010876//lipid localization;GO:0006869//lipid transport;GO:0050896//response to stimulus;GO:0051234//establishment of localization	NA	gi|350535973|ref|NP_001234735.1|//non-specific lipid transfer protein precursor [Solanum lycopersicum]
Solyc04g077320.2.1	954	111.829013598551	15.6004682966051	-2.84163329647801	0.0245355015975983	Down	0.00816325806098713	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|971567410|ref|XP_015168602.1|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 [Solanum tuberosum]
Solyc05g013510.3.1	3421	7259.89147030749	464.759615965393	-3.96539136101842	1.68476816631697e-29	Down	1.27481712301456e-31	GO:0044464//cell part;GO:0016021//integral component of membrane;GO:0009941//chloroplast envelope	GO:0015291//secondary active transmembrane transporter activity;GO:0005315//inorganic phosphate transmembrane transporter activity;GO:0009673//low-affinity phosphate transmembrane transporter activity	GO:0035435//phosphate ion transmembrane transport;GO:0015698//inorganic anion transport	K14640//solute carrier family 20 (sodium-dependent phosphate transporter)	gi|460386892|ref|XP_004239128.1|//PREDICTED: inorganic phosphate transporter 2-1, chloroplastic [Solanum lycopersicum]
Solyc04g009280.1.1	900	35.7697651688967	10.5717344283273	-1.75852855824298	0.0456988177709192	Down	0.0168244827465099	NA	NA	NA	NA	gi|970024886|ref|XP_015073752.1|//PREDICTED: uncharacterized protein YqeH [Solanum pennellii];gi|460382217|ref|XP_004236836.1|//PREDICTED: uncharacterized protein LOC101262407 [Solanum lycopersicum]
Solyc10g086390.2.1	1359	146.621462765852	7.67716046282072	-4.2553796908649	6.33937096045424e-08	Down	5.98067239485228e-09	NA	NA	NA	K11153//retinol dehydrogenase 12 [EC:1.1.1.300]	gi|460408386|ref|XP_004249626.1|//PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Solanum lycopersicum]
Solyc04g009790.3.1	3064	15.9535140498385	167.185536502287	3.38950389911278	3.02569762656603e-12	Up	1.44585670093099e-13	NA	NA	NA	K03327//multidrug resistance protein, MATE family	gi|698507635|ref|XP_009799148.1|//PREDICTED: MATE efflux family protein 6-like [Nicotiana sylvestris];gi|460382149|ref|XP_004236802.1|//PREDICTED: MATE efflux family protein 6 isoform X1 [Solanum lycopersicum]
Solyc03g059500.3.1	781	28.2318029649048	1.83368019455322	-3.94450731559716	0.000216068505290405	Down	4.09415190071629e-05	NA	NA	NA	NA	NA
Solyc11g071230.2.1	2558	193.514813709058	81.4207209344117	-1.24897610912584	0.000186045487904882	Down	3.47014917800816e-05	GO:0016021//integral component of membrane	GO:0016757//transferase activity, transferring glycosyl groups;GO:0015018//galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity	NA	K20869;K00735//galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 1 [EC:2.4.1.135];K10158//galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase 3 [EC:2.4.1.135]	gi|460411567|ref|XP_004251180.1|//PREDICTED: probable beta-1,4-xylosyltransferase IRX9H [Solanum lycopersicum]
Solyc03g095980.3.1	1069	35.3916039568866	5.13859879546376	-2.78396022569782	0.00386432307485867	Down	0.00100165881402144	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460379408|ref|XP_004235454.1|//PREDICTED: transcription factor bHLH51-like [Solanum lycopersicum]
Solyc04g005090.3.1	3445	2333.46105834702	536.690526883741	-2.12030906281928	6.72740240773355e-09	Down	5.4089037548387e-10	GO:0005759//mitochondrial matrix	GO:0004739//pyruvate dehydrogenase (acetyl-transferring) activity	GO:0006096//glycolytic process;GO:0006086//acetyl-CoA biosynthetic process from pyruvate;GO:0055114//oxidation-reduction process	K00161//pyruvate dehydrogenase E1 component alpha subunit [EC:1.2.4.1]	gi|698535098|ref|XP_009764077.1|//PREDICTED: pyruvate dehydrogenase E1 component subunit alpha, mitochondrial [Nicotiana sylvestris];gi|460382698|ref|XP_004237074.1|//PREDICTED: uncharacterized protein LOC101258059 isoform X1 [Solanum lycopersicum];gi|723690820|ref|XP_010319492.1|//PREDICTED: uncharacterized protein LOC101258059 isoform X2 [Solanum lycopersicum]
Solyc08g006155.1.1	494	22.6507084584156	107.644901294364	2.24865190642698	0.000825845712918089	Up	0.00017983415293229	NA	NA	NA	K00213//7-dehydrocholesterol reductase [EC:1.3.1.21];K13120//protein FAM32A	gi|970048460|ref|XP_015085750.1|//PREDICTED: protein FAM32A-like [Solanum pennellii]
Solyc02g086650.3.1	3782	6577.9811022753	1173.78491103334	-2.48647679594568	8.36385406844584e-06	Down	1.17626440287186e-06	NA	NA	NA	K15283//solute carrier family 35, member E1	gi|460373001|ref|XP_004232311.1|//PREDICTED: phosphoenolpyruvate/phosphate translocator 2, chloroplastic-like [Solanum lycopersicum];gi|970009960|ref|XP_015065878.1|//PREDICTED: phosphoenolpyruvate/phosphate translocator 2, chloroplastic-like [Solanum pennellii]
Solyc01g108490.3.1	3195	1356.93820788503	3851.13266620747	1.5049277978932	0.00452695773007958	Up	0.00119653560697757	NA	NA	NA	K16297//serine carboxypeptidase-like clade II [EC:3.4.16.-]	gi|460369925|ref|XP_004230807.1|//PREDICTED: serine carboxypeptidase-like 26 [Solanum lycopersicum]
Solyc04g071770.3.1	1457	662.477251222322	8217.14563908054	3.63269451715171	1.33955468123146e-05	Up	1.94957933735698e-06	NA	NA	NA	K09286//EREBP-like factor	gi|460384233|ref|XP_004237817.1|//PREDICTED: ethylene-responsive transcription factor ABR1-like [Solanum lycopersicum]
Solyc01g097120.3.1	2708	1136.37198057531	4541.73387838899	1.99880800954079	1.73910784645215e-08	Up	1.48123655477232e-09	NA	NA	NA	K16812//targeting protein for Xklp2	gi|460368451|ref|XP_004230080.1|//PREDICTED: protein WVD2-like 1 [Solanum lycopersicum]
Solyc01g105360.3.1	1726	947.98465007408	110.111209564854	-3.10590235302636	2.72756252082466e-12	Down	1.29220663633821e-13	NA	GO:0016758//transferase activity, transferring hexosyl groups	NA	K00699//glucuronosyltransferase [EC:2.4.1.17];K13030//cyanohydrin beta-glucosyltransferase [EC:2.4.1.85]	gi|460369460|ref|XP_004230580.1|//PREDICTED: 7-deoxyloganetin glucosyltransferase-like [Solanum lycopersicum]
Solyc05g005920.3.1	2051	1093.76889642421	339.690848709368	-1.68701368421591	0.00920837239162123	Down	0.00266202752323588	NA	NA	NA	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460386016|ref|XP_004238696.1|//PREDICTED: protein NRT1/ PTR FAMILY 1.2 [Solanum lycopersicum]
Solyc08g006540.3.1	1342	3982.87221109473	799.774485508245	-2.31614403015331	1.41744597851718e-12	Down	6.45110160939868e-14	GO:0009534//chloroplast thylakoid;GO:0044436//thylakoid part	GO:0005527//macrolide binding;GO:0016859//cis-trans isomerase activity	NA	K01802//peptidylprolyl isomerase [EC:5.2.1.8]	gi|460397890|ref|XP_004244498.1|//PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP13, chloroplastic [Solanum lycopersicum]
Solyc03g111540.2.1	2736	26.7755289161148	441.548470672695	4.04358483844644	3.35642175747329e-10	Up	2.20942329793419e-11	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460381631|ref|XP_004236550.1|//PREDICTED: putative receptor-like protein kinase At4g00960 [Solanum lycopersicum]
Solyc09g074550.3.1	927	205.729874757793	17.0032572476306	-3.59686825848095	1.6447477996647e-07	Down	1.66387562557402e-08	NA	NA	NA	NA	gi|723731517|ref|XP_010326606.1|//PREDICTED: CASP-like protein 1E1 [Solanum lycopersicum]
Solyc08g006890.3.1	1914	28526.1214587559	57510.0856955373	1.01153138260998	0.00376026879565959	Up	0.000972164319617374	GO:0032991//macromolecular complex;GO:0015630//microtubule cytoskeleton	GO:0032561//guanyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity	GO:0007017//microtubule-based process;GO:0009207//purine ribonucleoside triphosphate catabolic process;GO:0043623//cellular protein complex assembly	K07374//tubulin alpha	gi|972777091|ref|NP_001305617.1|//tubulin alpha chain [Solanum tuberosum]
Solyc11g071990.2.1	1572	13.3679031661658	435.554362164692	5.02600770176879	4.6697984863975e-21	Up	7.6762380069379e-23	NA	GO:0003824//catalytic activity;GO:0050662//coenzyme binding	GO:0008152//metabolic process	K17872//NADH:ubiquinone reductase (non-electrogenic) [EC:1.6.5.9];K08232//monodehydroascorbate reductase (NADH) [EC:1.6.5.4];K17871//NADH:ubiquinone reductase (non-electrogenic) [EC:1.6.5.9]	gi|460411671|ref|XP_004251229.1|//PREDICTED: apoptosis-inducing factor homolog B [Solanum lycopersicum]
Solyc06g035920.3.1	1039	130.938986785858	282.173800075912	1.10768931905857	0.0315501092386918	Up	0.0109322281005993	GO:0016020//membrane	GO:0043168//anion binding	NA	NA	gi|460390221|ref|XP_004240737.1|//PREDICTED: remorin [Solanum lycopersicum]
Solyc08g028780.1.1	1020	123.096885286888	875.863705736262	2.83091212982617	0.000118154008288089	Up	2.10253181589137e-05	NA	NA	NA	K10406//kinesin family member C2/C3	gi|460398693|ref|XP_004244888.1|//PREDICTED: uncharacterized protein LOC101262938 [Solanum lycopersicum]
Solyc05g050380.3.1	2672	1356.39173130955	4913.49796132285	1.8569765625712	0.0122893994993545	Up	0.00368297196864507	GO:0005887//integral component of plasma membrane	GO:0005249//voltage-gated potassium channel activity	GO:0071805//potassium ion transmembrane transport;GO:0042391//regulation of membrane potential	K05391//cyclic nucleotide gated channel, other eukaryote	gi|723702539|ref|XP_010321516.1|//PREDICTED: cyclic nucleotide-gated ion channel 1 isoform X2 [Solanum lycopersicum];gi|460388855|ref|XP_004240079.1|//PREDICTED: cyclic nucleotide-gated ion channel 1 isoform X1 [Solanum lycopersicum]
Solyc12g010050.2.1	2599	661.820667288554	197.267255657802	-1.74628884138471	0.0109978501422216	Down	0.00325327787120437	NA	GO:0008725//DNA-3-methyladenine glycosylase activity	GO:0006284//base-excision repair	K01246//DNA-3-methyladenine glycosylase I [EC:3.2.2.20]	gi|723748078|ref|XP_010313823.1|//PREDICTED: uncharacterized protein LOC101267869 isoform X2 [Solanum lycopersicum];gi|460412733|ref|XP_004251752.1|//PREDICTED: uncharacterized protein LOC101267869 isoform X1 [Solanum lycopersicum]
Solyc01g086845.1.1	420	12.1980798947159	112.636150284567	3.206943955532	3.75297584219647e-06	Up	4.9017546410677e-07	NA	GO:0032561//guanyl ribonucleotide binding	GO:0006810//transport;GO:0035556//intracellular signal transduction	K07904//Ras-related protein Rab-11A	gi|460367485|ref|XP_004229604.1|//PREDICTED: ras-related protein RGP1 [Solanum lycopersicum]
Solyc01g056310.3.1	1665	11.9890162279073	0.725241552648861	-4.04710788490218	0.00271972477971074	Down	0.000674610793594342	GO:0044421//extracellular region part	GO:0046914//transition metal ion binding;GO:0003824//catalytic activity	GO:0008152//metabolic process	K00423//L-ascorbate oxidase [EC:1.10.3.3]	gi|460366385|ref|XP_004229062.1|//PREDICTED: L-ascorbate oxidase homolog [Solanum lycopersicum]
Solyc01g109010.3.1	3007	35.1862975038678	11.0188855582542	-1.67503539554849	0.0414009590686963	Down	0.0149659497930601	NA	NA	NA	K17925//sorting nexin-13	gi|970000661|ref|XP_015089718.1|//PREDICTED: uncharacterized protein LOC107032641 [Solanum pennellii]
Solyc04g056540.3.1	2531	723.61793667474	282.56861977948	-1.35662691089231	5.09747434070717e-09	Down	4.02432184792672e-10	NA	GO:0016616//oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;GO:0016814//hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines;GO:0000166//nucleotide binding;GO:0046914//transition metal ion binding;GO:0003824//catalytic activity;GO:0005488//binding	GO:0044763//single-organism cellular process;GO:0006771//riboflavin metabolic process;GO:0044281//small molecule metabolic process;GO:0042726//flavin-containing compound metabolic process	K11752//diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]	gi|460383763|ref|XP_004237587.1|//PREDICTED: riboflavin biosynthesis protein PYRR, chloroplastic [Solanum lycopersicum];gi|698451699|ref|XP_009778198.1|//PREDICTED: riboflavin biosynthesis protein PYRR, chloroplastic [Nicotiana sylvestris]
Solyc02g081500.3.1	2988	774.323380370918	2390.90739002752	1.62655013994348	0.00286042450879806	Up	0.000713277271626161	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460373705|ref|XP_004232655.1|//PREDICTED: uncharacterized protein LOC101261683 isoform X2 [Solanum lycopersicum];gi|723678160|ref|XP_010317309.1|//PREDICTED: uncharacterized protein LOC101250956 [Solanum lycopersicum]
Solyc12g021317.1.1	1029	8.98208457694626	0.638001357238581	-3.81541890866845	0.0252490372479024	Down	0.00844771724829178	NA	NA	NA	NA	gi|723749290|ref|XP_010314029.1|//PREDICTED: WD repeat-containing protein 91 homolog isoform X3 [Solanum lycopersicum]
Solyc02g080020.1.1	504	4.70663560748195	47.4760881125235	3.33443299858102	5.96361787505362e-05	Up	9.94306797193784e-06	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723674035|ref|XP_010316620.1|//PREDICTED: putative receptor-like protein kinase At4g00960 isoform X2 [Solanum lycopersicum]
Solyc09g055765.1.1	330	0.750478449944405	7.91224775436581	3.39820505114048	0.0232895765691717	Up	0.00768708813627609	NA	NA	NA	NA	gi|970050832|ref|XP_015086956.1|//PREDICTED: transcription factor IBH1-like [Solanum pennellii]
Solyc01g067250.3.1	4129	234.056905796385	50.9428247057167	-2.19990846978123	1.26007114613489e-07	Down	1.25030169636614e-08	GO:0031461//cullin-RING ubiquitin ligase complex	GO:0061630//ubiquitin protein ligase activity;GO:0031625//ubiquitin protein ligase binding	GO:0042787//protein ubiquitination involved in ubiquitin-dependent protein catabolic process	K03347//cullin 1	gi|460366717|ref|XP_004229226.1|//PREDICTED: cullin-1 [Solanum lycopersicum];gi|702262754|ref|XP_010037190.1|//PREDICTED: cullin-1-like isoform X5 [Eucalyptus grandis];gi|672164483|ref|XP_008802119.1|//PREDICTED: cullin-1 [Phoenix dactylifera]
Solyc03g095490.3.1	2686	1062.89117745979	472.743441226308	-1.16886454854774	0.00361835140021238	Down	0.000931582164473436	GO:0016020//membrane;GO:0016021//integral component of membrane	GO:0005524//ATP binding;GO:0000166//nucleotide binding;GO:0004672//protein kinase activity;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process;GO:0006468//protein phosphorylation	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460378927|ref|XP_004235218.1|//PREDICTED: probable inactive receptor kinase At5g58300 [Solanum lycopersicum]
Solyc01g108440.2.1	1286	96.0265338661308	795.837069755123	3.05096809198711	1.00218936466699e-06	Up	1.17783773177092e-07	NA	NA	NA	NA	gi|723665551|ref|XP_010315267.1|//PREDICTED: uncharacterized protein DDB_G0271670-like [Solanum lycopersicum]
Solyc05g024490.3.1	1191	106.20722306604	221.679388539098	1.06159275055066	0.00123921255488524	Up	0.000280933754242286	NA	NA	NA	K05909//laccase [EC:1.10.3.2];K14857//AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-];K11340//actin-like protein 6A	gi|970061436|ref|XP_015057525.1|//PREDICTED: uncharacterized protein LOC107003747 [Solanum pennellii];gi|698491022|ref|XP_009791951.1|//PREDICTED: uncharacterized protein LOC104239115 [Nicotiana sylvestris];gi|698484273|ref|XP_009788948.1|//PREDICTED: uncharacterized protein LOC104236667 [Nicotiana sylvestris];gi|734349993|gb|KHN12240.1|//Actin-related protein 4 [Glycine soja];gi|698497980|ref|XP_009794930.1|//PREDICTED: uncharacterized protein LOC104241686 [Nicotiana sylvestris];gi|698583943|ref|XP_009778225.1|//PREDICTED: uncharacterized protein LOC104227642 [Nicotiana sylvestris]
Solyc05g006790.2.1	1590	0.381313625335867	9.58358211955003	4.65151501415927	0.00224264474213678	Up	0.000542019848964324	NA	NA	NA	NA	gi|970027908|ref|XP_015075240.1|//PREDICTED: uncharacterized protein LOC107019186 [Solanum pennellii]
Solyc09g009520.3.1	1749	219.092113495143	23.003641048901	-3.25160341741169	5.80053337011395e-08	Down	5.422594935234e-09	NA	NA	NA	NA	gi|460402068|ref|XP_004246536.1|//PREDICTED: uncharacterized protein LOC101260854 [Solanum lycopersicum]
Solyc12g044910.2.1	2078	226.553409693612	623.435482861336	1.46038906437196	0.00016080058661619	Up	2.96451357314625e-05	NA	NA	GO:0015031//protein transport;GO:0051234//establishment of localization	K20472//coatomer subunit zeta	gi|350534792|ref|NP_001233904.1|//nonclathrin coat protein zeta2-COP [Solanum lycopersicum]
BGI_novel_G000097	1710	15.4162226037715	100.818677393781	2.70924171943547	0.00110595159750118	Up	0.000248496952055208	NA	NA	NA	NA	gi|970007108|ref|XP_015064424.1|//PREDICTED: BURP domain-containing protein 5-like [Solanum pennellii]
Solyc02g087270.2.1	930	9.30211566437746	32.7503627330915	1.81588010174454	0.00545799861317343	Up	0.00147578358207694	NA	NA	NA	K15030//translation initiation factor 3 subunit M;K04079//molecular chaperone HtpG	gi|723678091|ref|XP_010317292.1|//PREDICTED: F-box/kelch-repeat protein At3g23880-like [Solanum lycopersicum]
Solyc11g007660.1.1	2929	1704.98257862287	4424.66293261335	1.37581055801263	0.00159642465268616	Up	0.000371911960611619	NA	NA	NA	K12812//ATP-dependent RNA helicase UAP56/SUB2 [EC:3.6.4.13];K18081//myotubularin-related protein 1/2 [EC:3.1.3.64 3.1.3.95]	gi|460409154|ref|XP_004250004.1|//PREDICTED: uncharacterized protein LOC101254856 [Solanum lycopersicum]
Solyc08g059660.2.1	2113	1573.07023435337	3576.91317807949	1.18513201485977	0.00709020059935047	Up	0.00198609130401516	NA	NA	NA	K20043//clathrin coat assembly protein AP180	gi|723721855|ref|XP_010324965.1|//PREDICTED: putative clathrin assembly protein At2g25430 [Solanum lycopersicum]
Solyc02g080780.3.1	1757	1314.89086228952	281.442030994381	-2.22403335474033	6.80810129009531e-15	Down	2.22808742086763e-16	NA	NA	NA	NA	gi|460373797|ref|XP_004232700.1|//PREDICTED: uncharacterized protein LOC101249700 [Solanum lycopersicum]
Solyc01g097210.3.1	1722	0.399562690122078	10.3383187827042	4.69343590824853	0.00203748965309616	Up	0.000487575800390537	NA	NA	NA	K07151//dolichyl-diphosphooligosaccharide--protein glycosyltransferase [EC:2.4.99.18];K09553//stress-induced-phosphoprotein 1	gi|565361996|ref|XP_006347738.1|//PREDICTED: death-associated protein kinase 1-like isoform X4 [Solanum tuberosum]
Solyc03g019950.3.1	2514	1134.67678618659	3404.61753192375	1.58521133488503	4.9763788982056e-06	Up	6.65916216063744e-07	NA	NA	NA	NA	gi|460377092|ref|XP_004234329.1|//PREDICTED: uncharacterized protein LOC101254569 isoform X1 [Solanum lycopersicum];gi|723684385|ref|XP_010317550.1|//PREDICTED: uncharacterized protein LOC101254569 isoform X2 [Solanum lycopersicum];gi|823157356|ref|XP_012478572.1|//PREDICTED: uncharacterized protein LOC105794121 isoform X1 [Gossypium raimondii]
Solyc01g056570.3.1	4256	1653.97058493245	809.188597418395	-1.03138568151091	0.000197609204504731	Down	3.7108810656584e-05	NA	NA	NA	K10615//E3 ubiquitin-protein ligase HERC4 [EC:2.3.2.26]	gi|460366377|ref|XP_004229059.1|//PREDICTED: uncharacterized protein LOC101261550 isoform X1 [Solanum lycopersicum]
Solyc03g025795.1.1	603	830.927600801783	137.285295296543	-2.59754567372439	5.20157061510644e-07	Down	5.74677773340371e-08	NA	GO:0043169//cation binding	GO:0006812//cation transport	K04392//Ras-related C3 botulinum toxin substrate 1	gi|723679622|ref|XP_010317603.1|//PREDICTED: LOW QUALITY PROTEIN: nucleolar protein 58-like [Solanum lycopersicum];gi|674952824|emb|CDX80386.1|//BnaC07g30580D [Brassica napus]
Solyc09g009190.3.1	3280	3055.86144828115	869.285081867229	-1.81367784225536	3.54929878924614e-05	Down	5.65310635397673e-06	NA	GO:0043169//cation binding;GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0016758//transferase activity, transferring hexosyl groups;GO:0003844//1,4-alpha-glucan branching enzyme activity;GO:0043167//ion binding;GO:0016798//hydrolase activity, acting on glycosyl bonds	GO:0005978//glycogen biosynthetic process;GO:0044238//primary metabolic process	K00700//1,4-alpha-glucan branching enzyme [EC:2.4.1.18]	gi|460402118|ref|XP_004246561.1|//PREDICTED: 1,4-alpha-glucan-branching enzyme 2-2, chloroplastic/amyloplastic isoform X1 [Solanum lycopersicum];gi|568215419|ref|NP_001275467.1|//1,4-alpha-glucan-branching enzyme 2-2, chloroplastic/amyloplastic-like [Solanum tuberosum]
Solyc03g025840.3.1	1100	5319.44214611085	1362.90716990231	-1.96458765625369	7.44604014739073e-07	Down	8.462418521468e-08	NA	NA	NA	K08360//cytochrome b-561 [EC:1.16.5.1]	gi|460377216|ref|XP_004234390.1|//PREDICTED: transmembrane ascorbate ferrireductase 1 [Solanum lycopersicum]
Solyc01g102610.3.1	2841	3749.96225643437	106.263564727692	-5.14115715424711	1.6549228701793e-15	Down	5.01510471692177e-17	NA	NA	NA	K13411	gi|460369063|ref|XP_004230384.1|//PREDICTED: ferric reduction oxidase 6-like [Solanum lycopersicum]
Solyc09g064740.3.1	1367	32.6162967250354	8.20084699073163	-1.99174816148219	0.0334914155790384	Down	0.0117055773424767	NA	NA	NA	K18327//RNA exonuclease 4 [EC:3.1.-.-]	gi|460403324|ref|XP_004247141.1|//PREDICTED: RNA exonuclease 4 [Solanum lycopersicum]
Solyc01g098550.3.1	1443	1806.43099638104	711.427562004162	-1.34435337326754	8.9055407502848e-07	Down	1.03269484397406e-07	NA	GO:0016836//hydro-lyase activity	GO:0006568//tryptophan metabolic process	K01695//tryptophan synthase alpha chain [EC:4.2.1.20]	gi|460368613|ref|XP_004230160.1|//PREDICTED: tryptophan synthase alpha chain [Solanum lycopersicum]
Solyc05g012580.1.1	503	3969.39985369103	26412.6484889194	2.73423616957791	1.85651722346824e-09	Up	1.37086649011875e-10	NA	NA	NA	NA	gi|970031369|ref|XP_015076969.1|//PREDICTED: uncharacterized protein LOC107020943 [Solanum pennellii]
Solyc04g054400.3.1	1131	344.527995261323	162.073188214791	-1.0879757711578	0.00287265242079563	Down	0.000716556955418381	NA	NA	NA	K00665//fatty acid synthase, animal type [EC:2.3.1.85];K00059//3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100];K06123//1-acylglycerone phosphate reductase [EC:1.1.1.101];K15095//(+)-neomenthol dehydrogenase [EC:1.1.1.208]	gi|460383438|ref|XP_004237430.1|//PREDICTED: NADPH-dependent 1-acyldihydroxyacetone phosphate reductase [Solanum lycopersicum]
Solyc09g063130.3.1	5082	14203.9549369353	6799.82731199347	-1.06272267508128	0.00775598286078414	Down	0.00219658408290733	NA	NA	NA	K02693//photosystem I subunit IV	gi|460403269|ref|XP_004247115.1|//PREDICTED: protein LOW PSII ACCUMULATION 1, chloroplastic [Solanum lycopersicum]
Solyc05g051690.3.1	1073	281.254831228152	565.507047273932	1.00766712470209	0.00059429300480766	Up	0.000125070012865068	NA	NA	NA	K14006//protein transport protein SEC23	gi|460388714|ref|XP_004240010.1|//PREDICTED: cell number regulator 6-like [Solanum lycopersicum]
Solyc05g051530.3.1	1894	113.922963346434	1880.69398604236	4.04513463808387	6.47777887285887e-07	Up	7.2824808969694e-08	GO:0044464//cell part	GO:0015604//organic phosphonate transmembrane transporter activity;GO:0032559//adenyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity	GO:0009207//purine ribonucleoside triphosphate catabolic process	K05681//ATP-binding cassette, subfamily G (WHITE), member 2	gi|970030690|ref|XP_015076630.1|//PREDICTED: ABC transporter G family member 11-like [Solanum pennellii]
Solyc07g062920.3.1	2839	721.952124094897	346.224714465211	-1.0601944567718	0.000104904257119405	Down	1.84133795577486e-05	NA	NA	NA	NA	gi|460397378|ref|XP_004244244.1|//PREDICTED: uncharacterized protein LOC101259653 [Solanum lycopersicum]
Solyc03g082510.1.1	345	242.541037019167	39.8697896245991	-2.60486096845662	7.32971387880347e-06	Down	1.01689261431737e-06	NA	NA	NA	K14488//SAUR family protein	gi|460378503|ref|XP_004235010.1|//PREDICTED: auxin-induced protein X15-like [Solanum lycopersicum]
Solyc07g042313.1.1	2265	1318.98303662294	623.631815172149	-1.08065957478761	0.00728122888214317	Down	0.00204801525065798	NA	NA	NA	K02996//small subunit ribosomal protein S9;K09458//3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]	gi|460396248|ref|XP_004243689.1|//PREDICTED: 3-oxoacyl-[acyl-carrier-protein] synthase II, chloroplastic-like [Solanum lycopersicum];gi|723716744|ref|XP_010323985.1|//PREDICTED: pentatricopeptide repeat-containing protein At1g09900-like [Solanum lycopersicum]
Solyc09g065180.3.1	1406	22057.7604987824	2804.42367732423	-2.97551009748057	4.69553347950713e-28	Down	3.85051947775297e-30	NA	GO:0048037//cofactor binding	GO:0008152//metabolic process	NA	gi|936975812|ref|NP_001234656.2|//mRNA binding protein precursor [Solanum lycopersicum]
Solyc03g111300.1.1	1476	15.6948583742439	2084.62251788996	7.05335034427508	5.09474375266287e-19	Up	1.04535905456805e-20	NA	NA	NA	K20665	gi|460381184|ref|XP_004236332.1|//PREDICTED: cytochrome P450 94B3-like [Solanum lycopersicum]
Solyc11g020280.2.1	3884	1630.93101650342	523.723307421397	-1.63881904562646	0.0147129739768351	Down	0.00452609863690249	GO:0016020//membrane	GO:0000166//nucleotide binding;GO:0004672//protein kinase activity	NA	K00924	gi|460409980|ref|XP_004250411.1|//PREDICTED: receptor-like protein kinase HAIKU2 [Solanum lycopersicum]
Solyc04g009820.3.1	1324	177.436848542289	67.1164798542787	-1.4025666911556	0.0297475639416566	Down	0.0101978658704121	NA	NA	NA	NA	gi|460382143|ref|XP_004236799.1|//PREDICTED: GRF1-interacting factor 1-like isoform X1 [Solanum lycopersicum]
Solyc04g079770.3.1	4163	571.507560208341	1567.30662569182	1.45544296585577	0.00589727716603853	Up	0.00161280462826989	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460385035|ref|XP_004238211.1|//PREDICTED: uncharacterized protein LOC101245644 [Solanum lycopersicum]
Solyc08g007060.3.1	3741	293.060171693244	28.0940597198244	-3.38285989139894	1.41180605542947e-09	Down	1.02354360288144e-10	GO:0044464//cell part	NA	GO:0015833//peptide transport	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460397987|ref|XP_004244546.1|//PREDICTED: protein NRT1/ PTR FAMILY 7.3 [Solanum lycopersicum]
Solyc07g061950.3.1	3691	2983.02661232651	12225.1416657068	2.03500242982833	1.08583717575725e-07	Up	1.06568111069362e-08	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K01652//acetolactate synthase I/II/III large subunit [EC:2.2.1.6]	gi|723719149|ref|XP_004244311.2|//PREDICTED: uncharacterized protein LOC101253806 [Solanum lycopersicum]
Solyc05g050560.1.1	1740	892.906752029228	4726.37597116737	2.40415297168595	7.53773530230766e-08	Up	7.21237756113902e-09	NA	NA	NA	K13422//transcription factor MYC2	gi|723702500|ref|XP_010321507.1|//PREDICTED: transcription factor bHLH13-like [Solanum lycopersicum]
Solyc12g006100.2.1	4822	24.6360641317675	8.05025980437188	-1.61366453996977	0.0391666002832123	Down	0.0140277014104891	NA	NA	NA	K12448//UDP-arabinose 4-epimerase [EC:5.1.3.5];K04460//serine/threonine-protein phosphatase 5 [EC:3.1.3.16]	gi|723747212|ref|XP_010313680.1|//PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Solanum lycopersicum]
Solyc08g022030.3.1	2802	2245.80835569767	608.751166031267	-1.88331028601853	8.05302403687723e-12	Down	4.07333890638229e-13	NA	NA	NA	K20283//golgin subfamily A member 4;K12472//epidermal growth factor receptor substrate 15	gi|565354959|ref|XP_006344374.1|//PREDICTED: putative leucine-rich repeat-containing protein DDB_G0290503 [Solanum tuberosum];gi|460398619|ref|XP_004244854.1|//PREDICTED: putative leucine-rich repeat-containing protein DDB_G0290503 [Solanum lycopersicum]
Solyc02g077550.3.1	837	8.37774212815585	45.1622134385369	2.43048281255993	0.000269833743162335	Up	5.22106366764455e-05	NA	NA	NA	K17553//protein phosphatase 1 regulatory subunit 11	gi|460374254|ref|XP_004232926.1|//PREDICTED: uncharacterized protein LOC101264691 [Solanum lycopersicum]
Solyc04g063280.3.1	4205	2088.71318894206	7329.24947428334	1.81105106912428	7.2112373478439e-06	Up	9.97767743968859e-07	GO:0005622//intracellular	NA	GO:0006886//intracellular protein transport	K03798//cell division protease FtsH [EC:3.4.24.-]	gi|723693436|ref|XP_010320008.1|//PREDICTED: pentatricopeptide repeat-containing protein At2g36730 [Solanum lycopersicum];gi|460384002|ref|XP_004237704.1|//PREDICTED: target of Myb protein 1 [Solanum lycopersicum]
Solyc09g066490.3.1	1134	314.118709060477	1507.15539100197	2.26244639133589	1.0342879975656e-20	Up	1.76570710781662e-22	GO:0044464//cell part	NA	GO:0016192//vesicle-mediated transport	K20069//adaptin ear-binding coat-associated protein 1/2	gi|460403530|ref|XP_004247243.1|//PREDICTED: uncharacterized protein At1g03900-like [Solanum lycopersicum]
Solyc11g012590.2.1	1130	43.4861298650497	1.47237177015866	-4.88434141962529	4.66098624348713e-07	Down	5.10436021446444e-08	GO:0031224//intrinsic component of membrane	NA	NA	NA	gi|460409722|ref|XP_004250287.1|//PREDICTED: CASP-like protein 2B1 [Solanum lycopersicum]
Solyc06g060670.3.1	2726	604.014201230203	289.613719828148	-1.06045252113492	0.000789237948763221	Down	0.0001710094004831	NA	NA	NA	K11438//type III protein arginine methyltransferase [EC:2.1.1.321]	gi|723710505|ref|XP_010322899.1|//PREDICTED: protein arginine N-methyltransferase 1.6 isoform X1 [Solanum lycopersicum];gi|723710508|ref|XP_010322900.1|//PREDICTED: protein arginine N-methyltransferase 1.6 isoform X2 [Solanum lycopersicum];gi|723710517|ref|XP_010322903.1|//PREDICTED: protein arginine N-methyltransferase 1.6 isoform X5 [Solanum lycopersicum]
Solyc08g077370.3.1	1565	189.575738805717	932.653644076683	2.29856706720857	0.00890533516164633	Up	0.00256176984233572	NA	NA	NA	NA	gi|460400673|ref|XP_004245857.1|//PREDICTED: probable purine permease 11 [Solanum lycopersicum]
Solyc01g005755.1.1	1602	241.525716479688	2291.32592853461	3.24593397520894	1.30755058263687e-05	Up	1.89933078147304e-06	NA	NA	NA	K10406//kinesin family member C2/C3	gi|460365455|ref|XP_004228617.1|//PREDICTED: receptor-like protein 12 [Solanum lycopersicum]
Solyc02g070490.3.1	3216	460.831018845655	71.2326621616209	-2.69362701490951	6.31136737975136e-06	Down	8.62437483754603e-07	GO:0009941//chloroplast envelope;GO:0009534//chloroplast thylakoid	NA	NA	K13698//abhydrolase domain-containing protein 4	gi|460374650|ref|XP_004233123.1|//PREDICTED: pheophytinase, chloroplastic [Solanum lycopersicum]
Solyc03g118943.1.1	2464	0.367096864528892	4.65110082182997	3.66333951631228	0.0303142981562437	Up	0.0104260484973781	NA	NA	NA	K01528//dynamin GTPase [EC:3.6.5.5]	gi|723685803|ref|XP_010318636.1|//PREDICTED: double-stranded RNA-binding protein 4-like isoform X1 [Solanum lycopersicum]
Solyc07g007720.3.1	520	57.960285987001	0.459758595391816	-6.978044356501	2.85208579543896e-08	Down	2.5110431820586e-09	NA	NA	NA	NA	gi|971572300|ref|XP_015169921.1|//PREDICTED: uncharacterized protein LOC107063036 [Solanum tuberosum]
Solyc11g008200.1.1	1815	100.393781662555	539.550000756147	2.42608674992386	9.39554885292323e-06	Up	1.32976364225993e-06	NA	NA	NA	K14794//ribosomal RNA-processing protein 12	gi|460409226|ref|XP_004250040.1|//PREDICTED: uncharacterized protein LOC101265191 [Solanum lycopersicum]
Solyc03g005040.1.1	426	12.2347933296417	375.223393421228	4.93868813923212	5.52000311761895e-09	Up	4.38876049272448e-10	NA	NA	NA	K13448//calcium-binding protein CML	gi|460376888|ref|XP_004234228.1|//PREDICTED: putative calcium-binding protein CML19 [Solanum lycopersicum]
Solyc06g071420.3.1	1684	292.113723534793	98.2033567863332	-1.57268589304515	7.18898347388153e-07	Down	8.13811794027814e-08	NA	GO:0046914//transition metal ion binding	NA	K16284//E3 ubiquitin-protein ligase SIS3 [EC:2.3.2.27]	gi|460391809|ref|XP_004241511.1|//PREDICTED: E3 ubiquitin-protein ligase SIS3-like [Solanum lycopersicum]
Solyc04g082255.1.1	591	7.87561125212831	1.04696132574345	-2.91118374937914	0.0335923953412677	Down	0.0117463195428818	NA	NA	NA	K03798//cell division protease FtsH [EC:3.4.24.-]	gi|970023267|ref|XP_015072970.1|//PREDICTED: ATP-dependent zinc metalloprotease FTSH, chloroplastic [Solanum pennellii]
Solyc03g006880.3.1	1635	2464.16830124961	1.3234044310863	-10.8626310641088	2.72882164628792e-46	Down	5.1874871015612e-49	NA	GO:0046914//transition metal ion binding;GO:0003824//catalytic activity	GO:0008152//metabolic process	K05282//gibberellin 20-oxidase [EC:1.14.11.12]	gi|350538089|ref|NP_001234070.1|//gibberellin 20-oxidase-1 [Solanum lycopersicum]
Solyc04g054205.1.1	1346	0.400110288134235	14.2798823311957	5.15744255559071	0.000378070832087327	Up	7.5521156595944e-05	NA	NA	NA	NA	gi|971571921|ref|XP_015169821.1|//PREDICTED: uncharacterized protein LOC107062992 [Solanum tuberosum]
Solyc02g081400.3.1	1654	1007.99745526353	486.48548123443	-1.05102334199639	0.00730923757459088	Down	0.00205671069220913	NA	GO:0016787//hydrolase activity	NA	K18881//D-lactate dehydratase [EC:4.2.1.130]	gi|460373721|ref|XP_004232663.1|//PREDICTED: protein DJ-1 homolog D [Solanum lycopersicum]
BGI_novel_G000406	1436	174.585307194745	39.7068929814327	-2.13647076812363	4.51326723873371e-06	Down	5.96879087633339e-07	NA	NA	NA	K00872//homoserine kinase [EC:2.7.1.39];K09840//9-cis-epoxycarotenoid dioxygenase [EC:1.13.11.51];K17479//glutaredoxin domain-containing cysteine-rich protein 1;K10398//kinesin family member 11	gi|113205226|gb|ABI34306.1|//Polyprotein, putative [Solanum demissum]
Solyc09g010860.3.1	1195	1317.12184177193	301.549241173665	-2.12692329994345	0.00550974498831842	Down	0.00149100747782882	GO:0044464//cell part	NA	NA	K20628	gi|350538315|ref|NP_001234081.1|//expansin A4 precursor [Solanum lycopersicum]
Solyc06g009490.3.1	1956	112.082312160724	53.1102110899377	-1.07749745409498	0.0136871592072386	Down	0.00416665533194861	NA	NA	NA	NA	gi|565378795|ref|XP_006355831.1|//PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like [Solanum tuberosum];gi|723704464|ref|XP_010321866.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g27110-like isoform X1 [Solanum lycopersicum]
Solyc04g077440.3.1	3300	8443.61439910707	632.706533412673	-3.73825229704416	2.91418489515894e-16	Down	8.14685653559419e-18	GO:0031224//intrinsic component of membrane	GO:0004497//monooxygenase activity;GO:0050662//coenzyme binding	GO:0008152//metabolic process	K00511//squalene monooxygenase [EC:1.14.14.17]	gi|723695025|ref|XP_010320287.1|//PREDICTED: squalene monooxygenase [Solanum lycopersicum];gi|970024076|ref|XP_015073362.1|//PREDICTED: squalene monooxygenase-like [Solanum pennellii]
Solyc01g104950.3.1	2871	2445.39509844433	609.313559389307	-2.00481082695287	0.0226585131386646	Down	0.00744416783972678	NA	GO:0015926//glucosidase activity	GO:0044238//primary metabolic process	K15920//beta-D-xylosidase 4 [EC:3.2.1.37]	gi|831181935|ref|NP_001296718.1|//beta-D-xylosidase 2 precursor [Solanum lycopersicum]
Solyc11g067160.2.1	1345	3492.61680300043	831.750382906549	-2.07008583386744	1.67833154343727e-12	Down	7.73854226640788e-14	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K05275//pyridoxine 4-dehydrogenase [EC:1.1.1.65]	gi|460411278|ref|XP_004251040.1|//PREDICTED: probable aldo-keto reductase 2 isoform X1 [Solanum lycopersicum];gi|723745379|ref|XP_010313340.1|//PREDICTED: pyridoxal reductase, chloroplastic isoform X2 [Solanum lycopersicum]
Solyc12g044290.2.1	1144	167.85471051057	44.561825660294	-1.91333277899085	0.00055644623154273	Down	0.000116130253854471	NA	NA	NA	K18660//malonyl-CoA/methylmalonyl-CoA synthetase [EC:6.2.1.-]	gi|723750987|ref|XP_010314289.1|//PREDICTED: malonate--CoA ligase [Solanum lycopersicum]
Solyc07g017370.2.1	709	26.9058031512639	3.53709569316686	-2.92728021699398	0.016768808758994	Down	0.00524228414573141	NA	NA	NA	NA	gi|723722396|ref|XP_010325040.1|//PREDICTED: uncharacterized protein LOC101260845 isoform X7 [Solanum lycopersicum]
Solyc09g011860.3.1	2382	267.409338806024	7200.26696375932	4.75092864320409	1.20497290090622e-13	Up	4.69808280284742e-15	NA	NA	NA	NA	gi|460401712|ref|XP_004246361.1|//PREDICTED: uncharacterized protein At1g04910-like [Solanum lycopersicum]
Solyc11g068770.1.1	858	278.298645709763	5477.08901295956	4.29870353387109	9.75679526147066e-29	Up	7.63727078018801e-31	NA	NA	NA	K12581//CCR4-NOT transcription complex subunit 7/8	gi|460411370|ref|XP_004251085.1|//PREDICTED: probable CCR4-associated factor 1 homolog 11 [Solanum lycopersicum]
Solyc01g094910.3.1	2394	692.024031926072	64.7839183344361	-3.41711450461563	4.29821108670423e-06	Down	5.64753022239169e-07	GO:0031224//intrinsic component of membrane	GO:0050664//oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor;GO:0046914//transition metal ion binding;GO:0050662//coenzyme binding	GO:0008152//metabolic process	K13411	gi|929981603|ref|NP_001234329.2|//ferric-chelate reductase [Solanum lycopersicum]
Solyc01g110570.3.1	461	49.9630117949056	0.538412500155041	-6.53600473077025	8.85920383839844e-07	Down	1.02567046078968e-07	NA	NA	NA	K14488//SAUR family protein	gi|460370303|ref|XP_004230993.1|//PREDICTED: auxin-induced protein 15A-like [Solanum lycopersicum]
Solyc09g098320.1.1	492	0.771740143020073	14.3134432653529	4.21311180940355	0.00139472968968548	Up	0.000319881160751257	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K05894//12-oxophytodienoic acid reductase [EC:1.3.1.42]	gi|565398273|ref|XP_006364701.1|//PREDICTED: 12-oxophytodienoate reductase-like protein [Solanum tuberosum]
Solyc10g055710.2.1	5734	164.007850397359	63.2293667318212	-1.37509819700456	0.00131444584413182	Down	0.000299802226041546	NA	NA	NA	NA	gi|460406810|ref|XP_004248851.1|//PREDICTED: mechanosensitive ion channel protein 6 [Solanum lycopersicum]
Solyc07g044930.3.1	4143	405.030183942945	123.634630888657	-1.7119465171346	1.34783060983625e-05	Down	1.96336738602955e-06	NA	NA	NA	K14442//ATP-dependent RNA helicase DHX36 [EC:3.6.4.13]	gi|460396098|ref|XP_004243616.1|//PREDICTED: ATP-dependent RNA helicase DHX36 isoform X1 [Solanum lycopersicum]
Solyc02g069970.3.1	3379	43.1612523519707	5.15696214757992	-3.0651433649555	0.0204253227918933	Down	0.00659551853832457	NA	GO:0000166//nucleotide binding;GO:0004672//protein kinase activity	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460376196|ref|XP_004233885.1|//PREDICTED: probable receptor-like protein kinase At1g30570 [Solanum lycopersicum]
Solyc03g006630.3.1	2103	29.8705894515	85.5960175027366	1.51881796703553	0.00346208230010411	Up	0.000883716251346092	NA	GO:0001727//lipid kinase activity	GO:0007186//G-protein coupled receptor signaling pathway;GO:0006796//phosphate-containing compound metabolic process	K04718//sphingosine kinase [EC:2.7.1.91]	gi|460376696|ref|XP_004234133.1|//PREDICTED: sphingosine kinase 1-like isoform X1 [Solanum lycopersicum]
Solyc06g054480.3.1	2108	27.5324007192907	101.89365415968	1.88786188663871	5.23984361452335e-05	Up	8.61914040215132e-06	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|970032681|ref|XP_015077646.1|//PREDICTED: receptor-like cytosolic serine/threonine-protein kinase RBK2 isoform X1 [Solanum pennellii]
Solyc09g010240.2.1	2535	156.281914612683	426.162597622033	1.44725314458317	0.00972437698166491	Up	0.0028330747908414	NA	NA	NA	K18328//lariat debranching enzyme [EC:3.1.-.-]	gi|1000944230|ref|XP_002530523.2|//PREDICTED: uncharacterized protein LOC8269718 [Ricinus communis]
Solyc05g007085.1.1	1782	21.9339952457454	1.41357963361275	-3.95574355638576	0.000164317001610867	Down	3.03362945049435e-05	NA	NA	NA	K01728//pectate lyase [EC:4.2.2.2]	gi|970028716|ref|XP_015075684.1|//PREDICTED: pectate lyase-like [Solanum pennellii]
Solyc08g015650.3.1	1496	327.190045002168	871.701818983758	1.4137058661574	0.00902276789674866	Up	0.00260176429287489	NA	NA	NA	K15191//La-related protein 7	gi|460398466|ref|XP_004244780.1|//PREDICTED: la-related protein 6B [Solanum lycopersicum]
Solyc05g054840.3.1	1354	104.919253467971	38.0873706901158	-1.4618948455836	0.00359948316712278	Down	0.000925899557787175	NA	NA	NA	NA	gi|460388214|ref|XP_004239764.1|//PREDICTED: UPF0769 protein C21orf59 homolog isoform X2 [Solanum lycopersicum]
Solyc06g073880.3.1	1689	872.516372700896	1991.88023672348	1.19087679815677	0.0180317425198244	Up	0.00570902120781976	NA	GO:0008270//zinc ion binding	NA	K19043//E3 ubiquitin-protein ligase RHF [EC:2.3.2.27]	gi|460391505|ref|XP_004241361.1|//PREDICTED: E3 ubiquitin-protein ligase RHF2A [Solanum lycopersicum]
Solyc12g021230.2.1	3108	3888.972932724	1417.74162479284	-1.45579455993078	1.054474178368e-06	Down	1.24537386205428e-07	GO:0043232//intracellular non-membrane-bounded organelle;GO:0009536//plastid;GO:0005694//chromosome;GO:0005739//mitochondrion;GO:0009507//chloroplast	GO:0003677//DNA binding;GO:0046872//metal ion binding;GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0003918//DNA topoisomerase type II (ATP-hydrolyzing) activity;GO:0003916//DNA topoisomerase activity	GO:0006259//DNA metabolic process;GO:0006265//DNA topological change	K02470//DNA gyrase subunit B [EC:5.99.1.3]	gi|970068438|ref|XP_015061345.1|//PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial [Solanum pennellii];gi|460413275|ref|XP_004252016.1|//PREDICTED: DNA gyrase subunit B, chloroplastic/mitochondrial [Solanum lycopersicum]
Solyc05g052710.3.1	658	11561.6819863747	2814.78734797884	-2.03825345692192	4.56252150784332e-06	Down	6.04753484489744e-07	NA	NA	NA	K19033//RPS31; 30S ribosomal protein S31	gi|460388554|ref|XP_004239932.1|//PREDICTED: 30S ribosomal protein S31, chloroplastic [Solanum lycopersicum]
Solyc01g067120.3.1	1262	678.916637339659	2161.67497709498	1.67084327497042	0.00611361364145912	Up	0.00167971694316368	NA	NA	NA	K03347//cullin 1	gi|723658125|ref|XP_010321252.1|//PREDICTED: cullin-1-like isoform X2 [Solanum lycopersicum];gi|723658122|ref|XP_010321250.1|//PREDICTED: cullin-1-like isoform X1 [Solanum lycopersicum]
Solyc02g021063.1.1	2767	493.544816337519	211.133943457297	-1.22502255887793	0.00712276483201106	Down	0.00199781258789567	GO:0005634//nucleus;GO:0005739//mitochondrion	GO:0004844//uracil DNA N-glycosylase activity	GO:0006284//base-excision repair	K03648//uracil-DNA glycosylase [EC:3.2.2.27];K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]	gi|113205352|gb|AAT38797.2|//Polyprotein, putative [Solanum demissum];gi|460371403|ref|XP_004231528.1|//PREDICTED: uracil-DNA glycosylase isoform X2 [Solanum lycopersicum]
Solyc10g009120.2.1	207	164.364556687595	706.515069101399	2.10382109972008	0.00815210550016318	Up	0.00232031748916229	NA	NA	NA	NA	NA
Solyc07g007780.3.1	2147	1151.85806337185	3659.44295429673	1.66766110310411	7.95999169516954e-05	Up	1.35920388980064e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460394319|ref|XP_004242751.1|//PREDICTED: calmodulin-binding receptor-like cytoplasmic kinase 3 isoform X1 [Solanum lycopersicum]
Solyc09g065920.3.1	1584	351.081372104539	87.5881412269393	-2.00299799268741	9.56991520888221e-07	Down	1.11651388861642e-07	NA	NA	NA	K16075//magnesium transporter	gi|460403475|ref|XP_004247216.1|//PREDICTED: magnesium transporter MRS2-I isoform X1 [Solanum lycopersicum]
Solyc02g088190.3.1	1673	352.456072116942	42.4334935487004	-3.05416809469611	3.27525133990398e-05	Down	5.19464531507807e-06	NA	NA	NA	K09422//myb proto-oncogene protein, plant	gi|460372799|ref|XP_004232212.1|//PREDICTED: myb-related protein 306 [Solanum lycopersicum]
Solyc03g007440.3.1	1233	722.782394931452	343.063169211116	-1.07508711793436	2.00396329188695e-05	Down	3.03642119484137e-06	NA	NA	NA	NA	gi|460376798|ref|XP_004234183.1|//PREDICTED: plastid division protein PDV1 [Solanum lycopersicum]
Solyc01g099680.3.1	880	3720.00543628977	23109.4090945074	2.63510373594286	3.68065249560979e-09	Up	2.84678467585743e-10	NA	NA	NA	K17616//CTD small phosphatase-like protein 2 [EC:3.1.3.-];K01228//mannosyl-oligosaccharide glucosidase [EC:3.2.1.106]	gi|460368765|ref|XP_004230235.1|//PREDICTED: REF/SRPP-like protein At3g05500 [Solanum lycopersicum]
Solyc05g006740.3.1	1050	3526.54754868364	1246.58506948078	-1.50027515319005	0.000329291745442028	Down	6.49829944836928e-05	NA	NA	NA	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|723697232|ref|XP_010320650.1|//PREDICTED: glutathione S-transferase U17-like isoform X1 [Solanum lycopersicum]
Solyc08g082990.3.1	2591	2879.82801348022	749.700355118439	-1.94159666425884	1.15814516431619e-06	Down	1.37925816310952e-07	NA	NA	NA	NA	gi|460399888|ref|XP_004245468.1|//PREDICTED: oligopeptide transporter 7-like [Solanum lycopersicum]
Solyc06g053670.1.1	720	493.106283389975	4471.44119977652	3.18076936292512	1.36949002630432e-08	Up	1.15468407615192e-09	NA	GO:0003824//catalytic activity	NA	K18880//very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase [EC:4.2.1.134]	gi|460390803|ref|XP_004241014.1|//PREDICTED: glyoxysomal fatty acid beta-oxidation multifunctional protein MFP-a-like [Solanum lycopersicum]
Solyc11g007160.2.1	2030	312.408302621718	47.8760789724198	-2.70605588911357	1.33955468123146e-05	Down	1.9498140115584e-06	NA	NA	NA	K00655//1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51];K13195//cold-inducible RNA-binding protein	gi|460409104|ref|XP_004249980.1|//PREDICTED: uncharacterized protein LOC101246778 [Solanum lycopersicum]
Solyc03g113630.3.1	3171	1677.70867338117	354.490455347474	-2.24267353142624	5.13165204802117e-08	Down	4.7360856086553e-09	NA	NA	NA	K17710//pentatricopeptide repeat domain-containing protein 1	gi|460380837|ref|XP_004236160.1|//PREDICTED: pentatricopeptide repeat-containing protein At1g74850, chloroplastic [Solanum lycopersicum]
Solyc01g005260.3.1	1293	102.286842940516	386.757661775008	1.91880928761657	4.23347661320165e-08	Up	3.85980460559536e-09	NA	NA	NA	K14399//polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78];K00133//aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]	gi|460365714|ref|XP_004228742.1|//PREDICTED: SEC14 cytosolic factor-like isoform X1 [Solanum lycopersicum]
Solyc02g089870.2.1	1014	532.893362363152	1328.760950001	1.31816281237251	0.00035692714669032	Up	7.09251013495638e-05	NA	NA	NA	K10666//E3 ubiquitin-protein ligase RNF5 [EC:2.3.2.27]	gi|460372554|ref|XP_004232094.1|//PREDICTED: E3 ubiquitin-protein ligase RNF185 [Solanum lycopersicum]
Solyc12g010450.2.1	1678	423.492839779718	1536.04882699522	1.85881459385074	5.80983208145848e-08	Up	5.43995012249281e-09	GO:0043234//protein complex	GO:0043169//cation binding;GO:0004721//phosphoprotein phosphatase activity	GO:0006464//cellular protein modification process	K14803//protein phosphatase PTC2/3 [EC:3.1.3.16]	gi|460412777|ref|XP_004251774.1|//PREDICTED: probable protein phosphatase 2C 27 [Solanum lycopersicum]
Solyc11g068920.1.1	1215	1.24574967946517	235.189001650851	7.56066258270335	2.79882540541068e-17	Up	7.04192317225364e-19	NA	NA	NA	K10260//F-box and WD-40 domain protein 7;K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K08332//vacuolar protein 8	gi|460411390|ref|XP_004251095.1|//PREDICTED: E3 ubiquitin-protein ligase PUB23-like [Solanum lycopersicum]
Solyc10g085870.1.1	1461	622.244253393806	45.8343168013743	-3.76298092737006	9.97070360404675e-07	Down	1.16920544669199e-07	NA	NA	NA	K13496//UDP-glucosyl transferase 73C [EC:2.4.1.-]	gi|460408374|ref|XP_004249620.1|//PREDICTED: UDP-glycosyltransferase 73C3-like [Solanum lycopersicum]
Solyc10g084110.2.1	2421	0.789711603962224	12.7690718361616	4.01518396201271	0.00363820934171032	Up	0.000937488488864003	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723740226|ref|XP_004249798.2|//PREDICTED: putative serine/threonine-protein kinase [Solanum lycopersicum]
Solyc08g078180.1.1	705	7.36503334896786	620.569629731296	6.39675722600642	2.85097570792137e-23	Up	3.78316442530195e-25	NA	NA	NA	K09286//EREBP-like factor	gi|460400568|ref|XP_004245806.1|//PREDICTED: ethylene-responsive transcription factor 2-like [Solanum lycopersicum]
Solyc04g008040.3.1	2398	563.363177320049	218.523781649565	-1.36627497418014	0.00586968315447139	Down	0.00160460176885691	NA	NA	NA	K09291//nucleoprotein TPR;K20478//golgin subfamily B member 1	gi|723690187|ref|XP_010319385.1|//PREDICTED: microtubule-associated protein 70-2 [Solanum lycopersicum]
Solyc06g072770.3.1	2330	121.987183681506	41.4903708081244	-1.55588112608185	0.000625107534431146	Down	0.000132207400863364	NA	GO:0005488//binding	NA	K20473//neuroblastoma-amplified sequence;K08488//syntaxin 7	gi|460393069|ref|XP_004242134.1|//PREDICTED: uncharacterized protein LOC101245856 [Solanum lycopersicum]
Solyc10g085880.1.1	1035	1386.51669092547	188.219377138511	-2.8809779177599	0.000484737239868869	Down	9.94702138555234e-05	NA	NA	NA	K13496//UDP-glucosyl transferase 73C [EC:2.4.1.-]	gi|460408370|ref|XP_004249618.1|//PREDICTED: UDP-glycosyltransferase 73C3-like [Solanum lycopersicum]
Solyc08g080150.1.1	1113	342.951634689216	129.81382393456	-1.4015611075495	0.0464109349876245	Down	0.0171558536705037	NA	NA	NA	K16221//transcription factor TCP21 (protein CCA1 HIKING EXPEDITION)	gi|921273985|ref|NP_001233956.2|//TCP transcription factor 20 [Solanum lycopersicum]
Solyc06g069310.3.1	1305	765.427709193588	1778.35590697469	1.21620604939563	0.000119004330680937	Up	2.11810675041552e-05	GO:0043231//intracellular membrane-bounded organelle	GO:0003677//DNA binding	NA	K08065//nuclear transcription Y subunit beta	gi|460392027|ref|XP_004241619.1|//PREDICTED: protein Dr1 homolog [Solanum lycopersicum]
Solyc05g009150.3.1	4479	3187.78710033752	429.453362360619	-2.89198190901682	8.79766606545682e-08	Down	8.50318626350437e-09	NA	NA	NA	K16276//zinc finger protein-like protein	gi|460386456|ref|XP_004238914.1|//PREDICTED: uncharacterized protein LOC101250214 [Solanum lycopersicum]
Solyc02g072160.3.1	2292	3745.00039764598	1032.13425128296	-1.85933523534997	1.78621674753613e-11	Down	9.54095944244549e-13	NA	NA	NA	K18159//NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 1	gi|460374457|ref|XP_004233027.1|//PREDICTED: uncharacterized protein LOC101268540 isoform X1 [Solanum lycopersicum];gi|723675253|ref|XP_010316841.1|//PREDICTED: uncharacterized protein LOC101268540 isoform X2 [Solanum lycopersicum]
Solyc09g075560.1.1	1104	694.626302301101	256.744864757999	-1.43590161898133	0.0176372734514122	Down	0.00556374851719476	GO:0043231//intracellular membrane-bounded organelle	GO:0008194//UDP-glycosyltransferase activity	NA	K20893	gi|723731237|ref|XP_010326564.1|//PREDICTED: probable galacturonosyltransferase-like 7 [Solanum lycopersicum]
Solyc05g013710.3.1	4432	139.136717638391	428.683752746255	1.62341054784735	0.0303184782839178	Up	0.0104286162816458	GO:0009536//plastid	NA	GO:0031325//positive regulation of cellular metabolic process	K03517//quinolinate synthase [EC:2.5.1.72]	gi|723698937|ref|XP_010320942.1|//PREDICTED: sufE-like protein 2, chloroplastic isoform X2 [Solanum lycopersicum];gi|723698932|ref|XP_010320941.1|//PREDICTED: sufE-like protein 2, chloroplastic isoform X1 [Solanum lycopersicum]
Solyc06g062830.3.1	3714	375.314724642033	130.336598680289	-1.52585864090969	0.0278099973843892	Down	0.00943412800787707	GO:0009536//plastid	GO:0016838//carbon-oxygen lyase activity, acting on phosphates;GO:0048037//cofactor binding	GO:0006566//threonine metabolic process	K01733//threonine synthase [EC:4.2.3.1]	gi|970035888|ref|XP_015079282.1|//PREDICTED: threonine synthase, chloroplastic-like [Solanum pennellii]
Solyc06g051230.4.1	1646	119.320362229822	241.707838731082	1.01842399884249	0.00130141081263527	Up	0.000296538105622462	NA	NA	NA	K10666//E3 ubiquitin-protein ligase RNF5 [EC:2.3.2.27]	gi|460390612|ref|XP_004240922.1|//PREDICTED: uncharacterized protein LOC101248399 [Solanum lycopersicum]
Solyc04g082690.1.1	552	0.46253242661687	94.1645514059303	7.66948573217746	1.14920628962752e-10	Up	6.9779970396721e-12	NA	GO:0046914//transition metal ion binding	NA	K19040//E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:2.3.2.27]	gi|460385521|ref|XP_004238452.1|//PREDICTED: RING-H2 finger protein ATL80-like [Solanum lycopersicum]
Solyc09g009420.1.1	465	2766.36864700029	530.064957462632	-2.38375235075141	6.16128719808144e-07	Down	6.90124796117293e-08	NA	NA	NA	NA	gi|460402088|ref|XP_004246546.1|//PREDICTED: uncharacterized protein LOC101264052 [Solanum lycopersicum]
Solyc01g107180.3.1	2943	1028.49439036014	488.517612867391	-1.07405144236291	1.07272705928771e-05	Down	1.53183888628716e-06	GO:0071944//cell periphery	NA	GO:0009958//positive gravitropism	K10523//speckle-type POZ protein;K15095//(+)-neomenthol dehydrogenase [EC:1.1.1.208]	gi|460369720|ref|XP_004230705.1|//PREDICTED: BTB/POZ domain-containing protein NPY2 [Solanum lycopersicum]
Solyc03g120120.3.1	3480	241.211980011792	109.04891652666	-1.14532612585788	0.0370400010551921	Down	0.0131407032983405	NA	NA	NA	K19476//vacuolar protein sorting-associated protein IST1	gi|460379933|ref|XP_004235713.1|//PREDICTED: uncharacterized protein LOC101251365 [Solanum lycopersicum]
Solyc02g091980.2.1	1249	1.47486737487613	13.5216349247589	3.1966124676298	0.0115198144244159	Up	0.00342356792924811	NA	NA	NA	K09422//myb proto-oncogene protein, plant	gi|460375639|ref|XP_004233612.1|//PREDICTED: transcription factor RAX3 [Solanum lycopersicum]
Solyc09g009490.3.1	1839	3.56028517023085	35.1974083210299	3.30540449597718	0.000356255798500931	Up	7.07784182946907e-05	NA	NA	NA	K03531//cell division protein FtsZ;K14432//ABA responsive element binding factor	gi|723727874|ref|XP_010325918.1|//PREDICTED: protein ABSCISIC ACID-INSENSITIVE 5 isoform X1 [Solanum lycopersicum]
Solyc09g065950.3.1	1440	473.207983591168	1428.46242764776	1.59391677105922	1.21602945548364e-08	Up	1.01804165685711e-09	GO:0015629//actin cytoskeleton	GO:0008092//cytoskeletal protein binding	GO:0007010//cytoskeleton organization	K10364//capping protein (actin filament) muscle Z-line, alpha	gi|460403479|ref|XP_004247218.1|//PREDICTED: F-actin-capping protein subunit alpha-like isoform X2 [Solanum lycopersicum]
BGI_novel_G000070	2351	767.097084465547	239.661660590907	-1.67841004290066	2.59843283809718e-05	Down	4.03111580146133e-06	NA	NA	NA	K13258//2-hydroxyisoflavanone dehydratase [EC:4.2.1.105];K20506//tuliposide A-converting enzyme [EC:4.2.99.22]	gi|460369931|ref|XP_004230810.1|//PREDICTED: probable carboxylesterase 13 [Solanum lycopersicum]
Solyc07g049440.3.1	1519	2143.34063728511	547.509371740215	-1.96890558846526	1.04735147821793e-07	Down	1.02517704704051e-08	NA	NA	NA	K21026;K01188//beta-glucosidase [EC:3.2.1.21];K00679//phospholipid:diacylglycerol acyltransferase [EC:2.3.1.158];K10960//geranylgeranyl reductase [EC:1.3.1.83]	gi|460395883|ref|XP_004243509.1|//PREDICTED: GDSL esterase/lipase At2g04570-like [Solanum lycopersicum]
Solyc02g082720.3.1	2149	115.695469660316	16.1679357542752	-2.8391249741025	0.0031033303995608	Down	0.000782773103243921	NA	NA	NA	K08669//HtrA serine peptidase 2 [EC:3.4.21.108]	gi|460373511|ref|XP_004232562.1|//PREDICTED: putative protease Do-like 14 [Solanum lycopersicum]
Solyc05g006870.3.1	765	22.3201619110016	356.019350427404	3.99553625927871	6.02073636654912e-18	Up	1.38018222209174e-19	NA	NA	NA	K03671//thioredoxin 1	gi|460386135|ref|XP_004238755.1|//PREDICTED: thioredoxin H4 [Solanum lycopersicum];gi|970026461|ref|XP_015074540.1|//PREDICTED: thioredoxin H4-like [Solanum pennellii]
Solyc07g065260.3.1	4739	1813.00134579922	713.71689208136	-1.34495617263819	0.000522342906953308	Down	0.000108078331463315	NA	GO:0043565//sequence-specific DNA binding;GO:0003700//transcription factor activity, sequence-specific DNA binding	GO:0006355//regulation of transcription, DNA-templated	K18835//WRKY transcription factor 2;K13424//WRKY transcription factor 33	gi|565358695|ref|XP_006346161.1|//PREDICTED: scarecrow-like protein 21 [Solanum tuberosum];gi|460396982|ref|XP_004244048.1|//PREDICTED: probable WRKY transcription factor 20 [Solanum lycopersicum]
Solyc01g107220.2.1	1167	1.37607030775516	12.2834223396283	3.15808648361987	0.00646244940220789	Up	0.00178880830702236	NA	NA	NA	K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]	gi|460371108|ref|XP_004231387.1|//PREDICTED: extensin-2-like [Solanum lycopersicum]
Solyc06g068230.3.1	5822	10910.9769420355	1383.73545415322	-2.97914022624158	1.40100533593081e-25	Down	1.47265358853619e-27	NA	NA	NA	K03255//protein TIF31	gi|723709122|ref|XP_004241691.2|//PREDICTED: clustered mitochondria protein isoform X1 [Solanum lycopersicum];gi|723709125|ref|XP_010322659.1|//PREDICTED: clustered mitochondria protein isoform X2 [Solanum lycopersicum]
Solyc10g084230.2.1	824	211.084676564847	0.830358347510605	-7.98987205950959	1.04613123816389e-16	Down	2.76857454561041e-18	NA	NA	NA	NA	gi|460408120|ref|XP_004249495.1|//PREDICTED: uncharacterized protein LOC101249595 [Solanum lycopersicum]
Solyc03g119760.3.1	2856	603.536214597519	217.219471370311	-1.47428691016979	0.00272909402127463	Down	0.000677288951604535	NA	GO:0046914//transition metal ion binding	NA	K11498//centromeric protein E	gi|460379981|ref|XP_004235737.1|//PREDICTED: uncharacterized protein LOC101259324 isoform X1 [Solanum lycopersicum];gi|723685519|ref|XP_010318590.1|//PREDICTED: uncharacterized protein LOC101259324 isoform X2 [Solanum lycopersicum]
Solyc07g061900.3.1	1216	9925.62917341532	1905.4178385327	-2.38105115522235	1.00408743023156e-06	Down	1.18044272959234e-07	GO:0030529//intracellular ribonucleoprotein complex;GO:0009536//plastid	GO:0003723//RNA binding;GO:0005198//structural molecule activity	GO:0010467//gene expression	K02926//large subunit ribosomal protein L4	gi|460397518|ref|XP_004244314.1|//PREDICTED: 50S ribosomal protein L4, chloroplastic [Solanum lycopersicum]
Solyc10g039210.3.1	1966	1.10983784946838	11.4115914181451	3.3620791833966	0.0112356635159877	Up	0.00333116399307314	NA	NA	NA	K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30];K07408//cytochrome P450, family 1, subfamily A, polypeptide 1 [EC:1.14.14.1]	gi|723735336|ref|XP_004248527.2|//PREDICTED: cytochrome P450 CYP82D47-like [Solanum lycopersicum]
Solyc09g007490.3.1	1100	1611.38925156724	3795.19452422264	1.23586879597184	0.0134689887243088	Up	0.00409321101346687	NA	NA	NA	K14006//protein transport protein SEC23	gi|460402351|ref|XP_004246676.1|//PREDICTED: cell number regulator 8 [Solanum lycopersicum]
Solyc04g082030.1.1	1296	17363.1591230836	4784.68255686099	-1.85953434503033	0.0106605005508949	Down	0.00314077070054694	NA	GO:0016831//carboxy-lyase activity	GO:0006595//polyamine metabolic process	K01581//ornithine decarboxylase [EC:4.1.1.17]	gi|350538807|ref|NP_001234616.1|//ornithine decarboxylase [Solanum lycopersicum]
Solyc09g090750.3.1	1629	357.072143723401	60.0947106561728	-2.57090566907218	3.27164336994468e-08	Down	2.9151263741442e-09	NA	NA	NA	NA	gi|460404614|ref|XP_004247776.1|//PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein At2g33255 [Solanum lycopersicum]
Solyc09g009670.3.1	1604	29.2649046982955	4.57288826221026	-2.67799400784587	0.00841259866795884	Down	0.00240261409698452	NA	NA	NA	K15287//solute carrier family 35, member F1/2	gi|460402048|ref|XP_004246527.1|//PREDICTED: solute carrier family 35 member F2-like isoform X1 [Solanum lycopersicum];gi|723727817|ref|XP_010325909.1|//PREDICTED: solute carrier family 35 member F2-like isoform X3 [Solanum lycopersicum]
Solyc07g065050.3.1	8878	2133.63328006119	881.110764014067	-1.27591693693266	0.00434985023752143	Down	0.00114356246180254	GO:0032991//macromolecular complex;GO:0005874//microtubule;GO:0015630//microtubule cytoskeleton;GO:0005737//cytoplasm	GO:0032561//guanyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity;GO:0005525//GTP binding;GO:0003924//GTPase activity	GO:0051301//cell division;GO:0007017//microtubule-based process;GO:0009207//purine ribonucleoside triphosphate catabolic process;GO:0043623//cellular protein complex assembly	K03531//cell division protein FtsZ	gi|350539589|ref|NP_001233950.1|//plastid-dividing ring protein [Solanum lycopersicum]
Solyc09g098440.3.1	1026	19.0242511671844	141.714479085314	2.89707559455121	2.83723819348899e-07	Up	2.99502704784584e-08	NA	NA	NA	NA	gi|460405039|ref|XP_004247985.1|//PREDICTED: CRIB domain-containing protein RIC4-like [Solanum lycopersicum]
Solyc07g007430.3.1	2347	785.863638073772	3330.82606435713	2.08352911353709	2.8940283141249e-10	Up	1.88131257635076e-11	NA	GO:0046914//transition metal ion binding	NA	K20032//palmitoyltransferase ZDHHC13/17 [EC:2.3.1.225]	gi|970042935|ref|XP_015082864.1|//PREDICTED: protein S-acyltransferase 24 [Solanum pennellii]
Solyc09g011300.3.1	1428	1691.98008055628	626.008295825597	-1.43445890300372	0.00460931472751776	Down	0.00122036538353804	NA	GO:0016763//transferase activity, transferring pentosyl groups;GO:0032561//guanyl ribonucleotide binding	GO:0019860//uracil metabolic process	K00761//uracil phosphoribosyltransferase [EC:2.4.2.9]	gi|460401859|ref|XP_004246433.1|//PREDICTED: uracil phosphoribosyltransferase isoform X1 [Solanum lycopersicum]
Solyc04g007540.2.1	1832	160.496191790926	46.7856925445424	-1.7783997517098	0.0018551565611309	Down	0.000439863235625229	GO:0044464//cell part;GO:0016021//integral component of membrane	GO:0015291//secondary active transmembrane transporter activity;GO:0015238//drug transmembrane transporter activity;GO:0015297//antiporter activity	GO:0015893//drug transport;GO:0006855//drug transmembrane transport	K03327//multidrug resistance protein, MATE family	gi|723690303|ref|XP_010319397.1|//PREDICTED: MATE efflux family protein 5-like isoform X1 [Solanum lycopersicum];gi|661896135|emb|CDP00713.1|//unnamed protein product [Coffea canephora]
Solyc11g009060.2.1	2241	896.788848096532	322.887121736312	-1.47373843719845	0.00331833583924645	Down	0.000841861557821756	NA	NA	NA	NA	gi|460409357|ref|XP_004250105.1|//PREDICTED: uncharacterized protein LOC101259307 [Solanum lycopersicum];gi|565373320|ref|XP_006353223.1|//PREDICTED: uncharacterized protein LOC102593154 isoform X2 [Solanum tuberosum];gi|565373318|ref|XP_006353222.1|//PREDICTED: uncharacterized protein LOC102593154 isoform X1 [Solanum tuberosum]
Solyc03g071590.3.1	1838	4181.17833948536	1053.00944883558	-1.98939119788414	1.77598590990358e-12	Down	8.20867201535874e-14	NA	GO:0016615//malate dehydrogenase activity	GO:0043648//dicarboxylic acid metabolic process;GO:0044238//primary metabolic process	K00051//malate dehydrogenase (NADP+) [EC:1.1.1.82]	gi|924859512|ref|NP_001234009.2|//chloroplast malate dehydrogenase [Solanum lycopersicum]
Solyc11g019930.2.1	2316	970.205423861469	342.802020981281	-1.50091462998462	8.18385700017702e-09	Down	6.65617115490765e-10	NA	NA	NA	K15692//E3 ubiquitin-protein ligase RNF13 [EC:2.3.2.27]	gi|460409963|ref|XP_004250405.1|//PREDICTED: receptor homology region, transmembrane domain- and RING domain-containing protein 2-like [Solanum lycopersicum]
Solyc02g087465.1.1	792	11.0628917325878	1.69206112750754	-2.70887494795217	0.0200797137944797	Down	0.00646820063410965	NA	NA	NA	NA	gi|723671539|ref|XP_010316267.1|//PREDICTED: uncharacterized protein LOC104645714 [Solanum lycopersicum]
Solyc10g007680.3.1	2954	160.04395590388	66.1446553194716	-1.27477170183762	0.0301581652283773	Down	0.0103622322601454	NA	NA	NA	K15191//La-related protein 7;K10615//E3 ubiquitin-protein ligase HERC4 [EC:2.3.2.26];K11493//regulator of chromosome condensation	gi|460405509|ref|XP_004248218.1|//PREDICTED: ultraviolet-B receptor UVR8 isoform X2 [Solanum lycopersicum];gi|723734366|ref|XP_010327103.1|//PREDICTED: ultraviolet-B receptor UVR8 isoform X1 [Solanum lycopersicum]
Solyc12g038540.2.1	5404	689.361880924739	2174.12008571336	1.65709819811998	6.76345030423997e-06	Up	9.30516440768963e-07	NA	NA	NA	K14406//cleavage stimulation factor subunit 1;K18577//mannosylglycoprotein endo-beta-mannosidase [EC:3.2.1.152]	gi|460413765|ref|XP_004252250.1|//PREDICTED: cleavage stimulation factor subunit 1 isoform X1 [Solanum lycopersicum];gi|697111315|ref|XP_009609531.1|//PREDICTED: uncharacterized protein LOC104103336, partial [Nicotiana tomentosiformis];gi|970068805|ref|XP_015061534.1|//PREDICTED: uncharacterized protein LOC107007425 [Solanum pennellii];gi|970068799|ref|XP_015061531.1|//PREDICTED: cleavage stimulation factor subunit 50 isoform X1 [Solanum pennellii]
Solyc02g005200.3.1	1421	3660.40214792615	938.682029998012	-1.96329371213973	3.65851142739472e-15	Down	1.15231927693027e-16	NA	NA	NA	K10845//TFIIH basal transcription factor complex TTD-A subunit	gi|460371269|ref|XP_004231464.1|//PREDICTED: uncharacterized protein LOC101248056 [Solanum lycopersicum]
Solyc01g096150.3.1	961	90.6084069276988	216.955366133457	1.2596814506515	0.0384099738598325	Up	0.0136928951094169	NA	NA	NA	NA	gi|460368289|ref|XP_004230000.1|//PREDICTED: uncharacterized protein LOC101257602 [Solanum lycopersicum]
Solyc09g010820.3.1	2400	255.279665341183	601.397519234247	1.2362402943744	0.00175351780444138	Up	0.000412853846343054	NA	NA	NA	K09422//myb proto-oncogene protein, plant	gi|460401807|ref|XP_004246407.1|//PREDICTED: myb-related protein B [Solanum lycopersicum]
Solyc02g089500.3.1	673	15.7962869662825	69.9068773736955	2.14584891143579	0.0033438942327836	Up	0.000849684172688454	GO:0044464//cell part	GO:0046914//transition metal ion binding	NA	K12135//zinc finger protein CONSTANS	gi|45544885|gb|AAS67378.1|//CONSTANS 2 [Solanum lycopersicum]
Solyc05g013380.3.1	2301	40403.2724128591	2568.77958782588	-3.97531713568824	6.82944814667896e-20	Down	1.29318609606117e-21	NA	GO:0016846//carbon-sulfur lyase activity;GO:0048037//cofactor binding;GO:0016740//transferase activity;GO:0003824//catalytic activity;GO:0030170//pyridoxal phosphate binding	GO:0008652//cellular amino acid biosynthetic process;GO:0009058//biosynthetic process	K14272//glutamate--glyoxylate aminotransferase [EC:2.6.1.4 2.6.1.2 2.6.1.44]	gi|565382582|ref|XP_006357614.1|//PREDICTED: glutamate--glyoxylate aminotransferase 2 [Solanum tuberosum];gi|460386878|ref|XP_004239121.1|//PREDICTED: glutamate--glyoxylate aminotransferase 2 [Solanum lycopersicum]
Solyc03g121180.3.1	2259	5536.89731473851	1922.25369193373	-1.52627901619131	9.15545172481307e-05	Down	1.5848336741476e-05	NA	GO:0016787//hydrolase activity	GO:0044238//primary metabolic process	K21026;K01188//beta-glucosidase [EC:3.2.1.21];K00679//phospholipid:diacylglycerol acyltransferase [EC:2.3.1.158];K01206//alpha-L-fucosidase [EC:3.2.1.51];K10960//geranylgeranyl reductase [EC:1.3.1.83]	gi|460379769|ref|XP_004235633.1|//PREDICTED: GDSL esterase/lipase APG-like [Solanum lycopersicum];gi|565352182|ref|XP_006343026.1|//PREDICTED: GDSL esterase/lipase APG-like [Solanum tuberosum]
Solyc02g067790.3.1	1601	236.156332636971	2670.28885110867	3.49918168227043	5.91024946667763e-07	Up	6.59803084564615e-08	NA	NA	GO:0006810//transport	K02575//MFS transporter, NNP family, nitrate/nitrite transporter	gi|723676777|ref|XP_004233327.2|//PREDICTED: high affinity nitrate transporter 2.7 isoform X1 [Solanum lycopersicum]
Solyc07g049290.3.1	2030	1896.19993063032	199.661594005938	-3.24748233211264	4.90166743523345e-08	Down	4.50386344251224e-09	NA	NA	NA	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|874507335|ref|NP_001297145.1|//protein NRT1/ PTR FAMILY 6.4 [Solanum lycopersicum]
Solyc03g097670.3.1	7504	1802.31329492645	698.00860760007	-1.36853308320203	0.00356111681443619	Down	0.000914703144784545	NA	NA	NA	K17592//sacsin	gi|723683877|ref|XP_010318320.1|//PREDICTED: uncharacterized protein LOC104646477 [Solanum lycopersicum]
Solyc10g011740.3.1	982	1534.09590950124	11814.1356743557	2.94505349915701	9.93325893828057e-10	Up	7.03118336208245e-11	NA	GO:0016879//ligase activity, forming carbon-nitrogen bonds;GO:0032559//adenyl ribonucleotide binding	GO:0006464//cellular protein modification process	K06689//ubiquitin-conjugating enzyme E2 D [EC:2.3.2.23]	gi|460405216|ref|XP_004248072.1|//PREDICTED: ubiquitin-conjugating enzyme E2 28-like [Solanum lycopersicum]
Solyc02g065610.3.1	1582	326.03180783429	1430.49444377075	2.13342926753335	6.01389657627468e-08	Up	5.64447278181737e-09	NA	NA	NA	K16573//gamma-tubulin complex component 6	gi|460375218|ref|XP_004233404.1|//PREDICTED: protein trichome birefringence-like 19 [Solanum lycopersicum]
Solyc05g015070.3.1	3406	1069.40686896497	5436.11457526059	2.34576501511968	5.20502020480591e-11	Up	3.00599113911531e-12	NA	NA	NA	K08332//vacuolar protein 8;K08900//mitochondrial chaperone BCS1	gi|460387041|ref|XP_004239199.1|//PREDICTED: U-box domain-containing protein 45-like [Solanum lycopersicum]
Solyc11g072550.2.1	1059	915.784755898394	7582.58446835999	3.04960920894804	3.01467307627636e-18	Up	6.68603876690187e-20	NA	GO:0005506//iron ion binding;GO:0016491//oxidoreductase activity	GO:0044237//cellular metabolic process	K15777//4,5-DOPA dioxygenase extradiol [EC:1.13.11.-]	gi|460411767|ref|XP_004251277.1|//PREDICTED: extradiol ring-cleavage dioxygenase [Solanum lycopersicum]
Solyc04g079900.3.1	5274	1012.11976804931	436.719958676425	-1.21259964902369	4.80411591846724e-06	Down	6.39693845948601e-07	NA	NA	NA	K01404//leishmanolysin [EC:3.4.24.36]	gi|460385056|ref|XP_004238221.1|//PREDICTED: uncharacterized protein LOC101248771 isoform X1 [Solanum lycopersicum];gi|698527089|ref|XP_009760389.1|//PREDICTED: uncharacterized protein LOC104212740 [Nicotiana sylvestris]
Solyc10g055620.2.1	2289	581.629359155353	76.1755026638408	-2.93270107457993	4.25938269108051e-13	Down	1.792471693093e-14	NA	NA	NA	K10532//heparan-alpha-glucosaminide N-acetyltransferase [EC:2.3.1.78]	gi|460406395|ref|XP_004248650.1|//PREDICTED: heparan-alpha-glucosaminide N-acetyltransferase isoform X1 [Solanum lycopersicum]
Solyc11g011220.2.1	2419	483.394189998779	2738.01674772664	2.50185923289741	2.61652318743855e-12	Up	1.23667489252724e-13	NA	NA	NA	K18171//COX assembly mitochondrial protein 1	gi|460409520|ref|XP_004250186.1|//PREDICTED: uncharacterized protein LOC101258515 [Solanum lycopersicum]
Solyc03g116660.3.1	3119	299.269010178677	82.5334593551633	-1.85839187630494	5.63772961655222e-08	Down	5.25568874720333e-09	NA	NA	NA	NA	gi|971580802|ref|XP_006364213.2|//PREDICTED: uncharacterized protein LOC102599459 [Solanum tuberosum]
Solyc07g005610.3.1	2674	147.046182300605	693.296800711635	2.23720377446479	2.10713317637632e-12	Up	9.84920606521507e-14	NA	NA	NA	NA	gi|460394000|ref|XP_004242594.1|//PREDICTED: uncharacterized protein LOC101268290 [Solanum lycopersicum];gi|970039032|ref|XP_015080853.1|//PREDICTED: uncharacterized protein LOC107024391 [Solanum pennellii]
Solyc01g080130.2.1	2550	1280.96497802297	332.339209795946	-1.94650261334109	8.05638884375162e-06	Down	1.1282187597277e-06	NA	NA	NA	NA	gi|460367160|ref|XP_004229443.1|//PREDICTED: uncharacterized protein LOC101258185 isoform X1 [Solanum lycopersicum]
Solyc01g058500.3.1	307	409.353022824829	2410.21969979589	2.55774720513589	0.0207779447969018	Up	0.00673029447909185	NA	NA	NA	NA	gi|49532956|dbj|BAD26579.1|//cytochrome P450 like_TBP [Citrullus lanatus]
Solyc12g098740.2.1	4288	3656.4152610366	8124.86588105058	1.15191407099228	0.00529996791927456	Up	0.00142692963623528	NA	NA	NA	K12471//epsin	gi|460415233|ref|XP_004252964.1|//PREDICTED: clathrin interactor EPSIN 2 isoform X1 [Solanum lycopersicum]
Solyc12g013620.2.1	1557	1337.434566908	21459.5239464216	4.00407785654255	3.55630463751751e-14	Up	1.30173369391762e-15	NA	GO:0003676//nucleic acid binding	NA	K12581//CCR4-NOT transcription complex subunit 7/8;K13126//polyadenylate-binding protein;K05941//glutathione gamma-glutamylcysteinyltransferase [EC:2.3.2.15];K01054//acylglycerol lipase [EC:3.1.1.23]	gi|350536069|ref|NP_001233972.1|//jasmonic acid 2 [Solanum lycopersicum]
Solyc08g079240.3.1	1499	5681.80386932537	1134.30219332957	-2.32454398706196	2.4303889030395e-14	Down	8.62431130048307e-16	NA	NA	NA	K01051//pectinesterase [EC:3.1.1.11]	gi|840084892|ref|NP_001296943.1|//uncharacterized protein LOC101243917 [Solanum lycopersicum]
Solyc04g077970.3.1	1844	1950.90583918834	5352.00524284162	1.45593538155007	2.27966051443751e-07	Up	2.36225444689737e-08	GO:0044424//intracellular part	GO:0016763//transferase activity, transferring pentosyl groups	GO:0043096//purine nucleobase salvage	K00759//adenine phosphoribosyltransferase [EC:2.4.2.7]	gi|970025065|ref|XP_015073845.1|//PREDICTED: adenine phosphoribosyltransferase 1-like [Solanum pennellii]
Solyc06g076860.3.1	2121	97.9545484284254	38.116025990191	-1.36171477379485	0.00386895336412561	Down	0.00100329165626293	NA	NA	NA	K02213//cell division control protein 6	gi|460391122|ref|XP_004241172.1|//PREDICTED: cell division control protein 6 homolog [Solanum lycopersicum]
Solyc07g064940.3.1	1158	2085.05176445925	663.311506670445	-1.65232474304539	8.61394767714906e-07	Down	9.95349552674895e-08	NA	NA	NA	K03671//thioredoxin 1;K09584//protein disulfide-isomerase A6 [EC:5.3.4.1]	gi|460397066|ref|XP_004244089.1|//PREDICTED: thioredoxin-like protein HCF164, chloroplastic [Solanum lycopersicum]
Solyc02g065070.3.1	2160	1304.31443043533	353.43750112156	-1.88376467248402	4.23023049266377e-12	Down	2.06560382637153e-13	NA	NA	NA	K00924	gi|460375277|ref|XP_004233433.1|//PREDICTED: CDPK-related kinase 5-like [Solanum lycopersicum]
Solyc03g006930.2.1	1675	13.7231885395546	266.970778473345	4.28199420785939	1.08620670836445e-07	Up	1.0664486617832e-08	NA	NA	NA	K14497//protein phosphatase 2C [EC:3.1.3.16]	gi|723679013|ref|XP_010317458.1|//PREDICTED: probable protein phosphatase 2C 75 isoform X1 [Solanum lycopersicum]
Solyc03g118450.1.1	222	8.09952546735264	157.503034702123	4.28139842962051	5.6546439789345e-09	Up	4.50634740829058e-10	NA	NA	NA	NA	NA
Solyc03g097230.1.1	585	169.184632563205	904.235286589665	2.41809968699063	3.44086029505657e-07	Up	3.69506430224317e-08	NA	NA	NA	K19761//gamma-glutamylaminecyclotransferase [EC:2.3.2.-]	gi|460379216|ref|XP_004235360.1|//PREDICTED: putative gamma-glutamylcyclotransferase At3g02910 [Solanum lycopersicum]
Solyc02g089790.3.1	4961	108.015314401171	44.7312522866133	-1.27188081865458	0.00998519396091939	Down	0.00291836535886271	NA	NA	NA	K04498//E1A/CREB-binding protein [EC:2.3.1.48]	gi|723670681|ref|XP_010316190.1|//PREDICTED: probable histone acetyltransferase HAC-like 1 [Solanum lycopersicum]
Solyc01g104980.3.1	3096	563.361128851621	272.047795186885	-1.05019988704583	0.00293171796539595	Down	0.000732929491348989	NA	NA	NA	K13416//brassinosteroid insensitive 1-associated receptor kinase 1 [EC:2.7.10.1 2.7.11.1]	gi|460369450|ref|XP_004230575.1|//PREDICTED: F-box/kelch-repeat protein At1g22040 [Solanum lycopersicum];gi|970001689|ref|XP_015058988.1|//PREDICTED: F-box/kelch-repeat protein At1g22040 [Solanum pennellii]
Solyc02g077970.3.1	1073	362.748183706781	2.2785777381491	-7.31469098868676	2.04504169740229e-16	Down	5.60274954372551e-18	NA	NA	NA	NA	gi|723674766|ref|XP_010316759.1|//PREDICTED: late embryogenesis abundant protein 76-like [Solanum lycopersicum]
Solyc11g042650.1.1	2238	94.9475400533297	216.685311497824	1.19039883247888	0.0473604309725915	Up	0.0175668573359273	NA	NA	NA	NA	NA
Solyc06g076070.1.1	234	9.03986293632377	1124.91157146978	6.9592949828293	1.3257200993974e-22	Up	1.89755672494633e-24	NA	NA	NA	NA	NA
Solyc07g052950.3.1	683	404.279064316986	39.2805014920361	-3.36346624156186	2.48271256821354e-07	Down	2.5893207715303e-08	NA	NA	NA	NA	gi|460395732|ref|XP_004243435.1|//PREDICTED: uncharacterized protein LOC101268883 [Solanum lycopersicum]
Solyc04g078410.3.1	4157	19.0928590088326	77.443733217735	2.02011534878875	0.0405116919559558	Up	0.0145901285104534	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460384855|ref|XP_004238122.1|//PREDICTED: putative receptor protein kinase ZmPK1 [Solanum lycopersicum]
Solyc02g091260.1.1	435	1.43678832478564	38.2701019323904	4.73529830648863	5.86848905982548e-07	Up	6.54703584167947e-08	NA	NA	NA	NA	gi|723669981|ref|XP_010316072.1|//PREDICTED: uncharacterized protein LOC104645685 [Solanum lycopersicum]
Solyc01g006680.3.1	2459	42.0719815590256	881.032395374142	4.38826339302887	8.91655312706358e-34	Up	4.78598348850886e-36	NA	NA	NA	K10277//lysine-specific demethylase 8 [EC:1.14.11.27]	gi|984655735|ref|NP_001306150.1|//JmjC-domain protein JMJ524 [Solanum lycopersicum];gi|460365546|ref|XP_004228662.1|//PREDICTED: UDP-glycosyltransferase 92A1-like [Solanum lycopersicum]
Solyc03g123880.3.1	1375	3156.49435403756	1182.59309407914	-1.416369413165	4.85866589342569e-06	Down	6.47991149794137e-07	NA	NA	NA	NA	gi|460379519|ref|XP_004235509.1|//PREDICTED: uncharacterized protein LOC101265521 [Solanum lycopersicum]
Solyc04g079060.3.1	3315	918.438254119794	271.380130026328	-1.75886764030429	5.34223811206076e-05	Down	8.81146699189983e-06	NA	NA	NA	K16296//serine carboxypeptidase-like clade I [EC:3.4.16.-]	gi|723695385|ref|XP_010320337.1|//PREDICTED: serine carboxypeptidase-like 13 isoform X1 [Solanum lycopersicum]
Solyc02g085340.1.1	1830	835.712951039754	211.759041982536	-1.98058392039787	0.00424241694386576	Down	0.00111278843126522	NA	NA	NA	K14494//DELLA protein	gi|460373183|ref|XP_004232402.1|//PREDICTED: scarecrow-like protein 4 [Solanum lycopersicum]
Solyc12g055970.2.1	2562	171.583997742565	37.6841018737635	-2.1868870961584	0.00445995302545878	Down	0.00117649797082048	NA	GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0005488//binding	GO:0044238//primary metabolic process	K01179//endoglucanase [EC:3.2.1.4]	gi|697184573|ref|XP_009601304.1|//PREDICTED: endoglucanase 6 [Nicotiana tomentosiformis];gi|723752034|ref|XP_010314503.1|//PREDICTED: endoglucanase 6-like [Solanum lycopersicum]
Solyc09g059040.3.1	1519	1310.1360210226	17674.4722411176	3.75387862864936	1.24567920227864e-14	Up	4.22996031487937e-16	NA	GO:0046914//transition metal ion binding;GO:0003824//catalytic activity	GO:0008152//metabolic process	K18980//2-methylene-furan-3-one reductase [EC:1.3.1.105]	gi|460403136|ref|XP_004247055.1|//PREDICTED: putative quinone-oxidoreductase homolog, chloroplastic [Solanum lycopersicum];gi|723729833|ref|XP_010326282.1|//PREDICTED: putative quinone-oxidoreductase homolog, chloroplastic [Solanum lycopersicum]
Solyc03g121600.3.1	1655	1403.00996132715	225.466066297034	-2.63754302953901	0.0118697529896488	Down	0.00354305136205112	NA	NA	NA	K15403//fatty acid omega-hydroxy dehydrogenase [EC:1.1.-.-]	gi|460381301|ref|XP_004236390.1|//PREDICTED: protein HOTHEAD [Solanum lycopersicum]
Solyc01g109790.3.1	3996	1136.24634841309	250.708033137645	-2.18019552942038	2.35830955606373e-07	Down	2.45151449235444e-08	GO:0009536//plastid;GO:0009507//chloroplast	GO:0008878//glucose-1-phosphate adenylyltransferase activity;GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0070566//adenylyltransferase activity	GO:0019252//starch biosynthetic process;GO:0005977//glycogen metabolic process;GO:0005978//glycogen biosynthetic process;GO:0005982//starch metabolic process	K00975//glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]	gi|747082214|ref|XP_011088418.1|//PREDICTED: glucose-1-phosphate adenylyltransferase large subunit 1 [Sesamum indicum];gi|807045825|ref|NP_001233918.2|//ADP-glucose pyrophosphorylase large subunit [Solanum lycopersicum]
Solyc03g115650.3.1	1100	441.290681390235	2831.06512139401	2.68154374735807	1.69544406315501e-07	Up	1.72211311767459e-08	NA	GO:0008135//translation factor activity, RNA binding;GO:0043021//ribonucleoprotein complex binding	GO:0018205//peptidyl-lysine modification;GO:0006449//regulation of translational termination;GO:0006448//regulation of translational elongation	K02180//cell cycle arrest protein BUB3;K03263//translation initiation factor 5A	gi|350536367|ref|NP_001234499.1|//eukaryotic translation initiation factor 5A-1 [Solanum lycopersicum]
Solyc07g061780.3.1	4007	924.815036849164	260.54466195824	-1.82763415812591	1.80226160292935e-06	Down	2.22494797558596e-07	GO:0016021//integral component of membrane	GO:0046872//metal ion binding;GO:0036459//thiol-dependent ubiquitinyl hydrolase activity	GO:0006511//ubiquitin-dependent protein catabolic process;GO:0016579//protein deubiquitination	K11855//ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12]	gi|460397528|ref|XP_004244319.1|//PREDICTED: ubiquitin carboxyl-terminal hydrolase 15 isoform X1 [Solanum lycopersicum]
Solyc09g009390.3.1	2639	5176.87316557551	14241.4539052655	1.45994356064869	0.00335085208050325	Up	0.000852076669643402	GO:0044424//intracellular part	GO:0016655//oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor;GO:0050662//coenzyme binding	GO:0019725//cellular homeostasis;GO:0008152//metabolic process	K08232//monodehydroascorbate reductase (NADH) [EC:1.6.5.4]	gi|460402090|ref|XP_004246547.1|//PREDICTED: monodehydroascorbate reductase [Solanum lycopersicum]
Solyc03g033770.1.1	345	24.0636617442752	234.193425484833	3.28277247776149	9.00367113497372e-05	Up	1.55621078920803e-05	NA	NA	NA	K08900//mitochondrial chaperone BCS1	gi|698505202|ref|XP_009798066.1|//PREDICTED: probable mitochondrial chaperone bcs1 [Nicotiana sylvestris]
Solyc02g093190.3.1	5346	839.75818044971	171.707813963294	-2.29001825042212	2.92409849839472e-14	Down	1.05397467121951e-15	GO:0031519//PcG protein complex	NA	NA	K11430//histone-lysine N-methyltransferase EZH2 [EC:2.1.1.43]	gi|723669243|ref|XP_010315966.1|//PREDICTED: histone-lysine N-methyltransferase CLF-like isoform X1 [Solanum lycopersicum];gi|723669264|ref|XP_010315973.1|//PREDICTED: histone-lysine N-methyltransferase CLF-like isoform X3 [Solanum lycopersicum];gi|723669261|ref|XP_010315972.1|//PREDICTED: histone-lysine N-methyltransferase CLF-like isoform X2 [Solanum lycopersicum]
Solyc02g069910.2.1	321	244.679016820918	108.88312474613	-1.16811000885232	0.0362981333601245	Down	0.0128250337751834	NA	NA	NA	NA	gi|565372875|ref|XP_006353012.1|//PREDICTED: uncharacterized protein LOC102599613 [Solanum tuberosum]
BGI_novel_G000365	429	106.43841036255	23.9888817310477	-2.14958105781265	0.0315442079413387	Down	0.010929007485267	GO:0016021//integral component of membrane;GO:0009706//chloroplast inner membrane	NA	GO:0015031//protein transport	NA	gi|544163672|ref|YP_008563147.1|//hypothetical chloroplast RF1 (chloroplast) [Solanum lycopersicum]
BGI_novel_G000058	553	3.99495942153795	23.3654500883041	2.54812407379507	0.0241427130543947	Up	0.00801727413901904	NA	NA	NA	NA	gi|723659438|ref|XP_010322028.1|//PREDICTED: uncharacterized protein LOC104647880 [Solanum lycopersicum]
Solyc05g051490.3.1	1790	277.634768154637	1881.96672104464	2.76098096421387	1.55160573806189e-16	Up	4.20462714913893e-18	NA	NA	NA	NA	gi|460388738|ref|XP_004240022.1|//PREDICTED: LMBR1 domain-containing protein 2 homolog A-like [Solanum lycopersicum]
Solyc06g060770.3.1	1618	260.916957600988	49.0485247424635	-2.41130906178061	1.37047371053438e-09	Down	9.90002255485177e-11	NA	GO:0016741//transferase activity, transferring one-carbon groups;GO:0016811//hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	GO:0006188//IMP biosynthetic process	K01433//formyltetrahydrofolate deformylase [EC:3.5.1.10]	gi|460392789|ref|XP_004241996.1|//PREDICTED: formyltetrahydrofolate deformylase 1, mitochondrial-like [Solanum lycopersicum]
Solyc01g009930.2.1	1968	112.397431773785	863.523076090725	2.94162566062116	0.00424994861670068	Up	0.00111538375796341	NA	NA	NA	K19613//leucine-rich repeat protein SHOC2;K10406//kinesin family member C2/C3	gi|565396337|ref|XP_006363779.1|//PREDICTED: receptor-like protein 12 [Solanum tuberosum]
Solyc04g074470.1.1	930	94.4604493242329	1091.11234954006	3.52994545231726	1.31410316036781e-40	Up	3.96758446361238e-43	NA	NA	NA	K14299//nucleoporin SEH1	gi|460384470|ref|XP_004237934.1|//PREDICTED: protein EXORDIUM-like 2 [Solanum lycopersicum]
Solyc09g066410.2.1	1602	68.788522555701	7.60845323461838	-3.17649277463985	0.00196504405237849	Down	0.00046870124091136	GO:0031224//intrinsic component of membrane;GO:0005887//integral component of plasma membrane	GO:0015291//secondary active transmembrane transporter activity;GO:0005315//inorganic phosphate transmembrane transporter activity;GO:0022891//substrate-specific transmembrane transporter activity	GO:0055085//transmembrane transport;GO:0006817//phosphate ion transport;GO:0015698//inorganic anion transport	K08176//MFS transporter, PHS family, inorganic phosphate transporter	gi|460403514|ref|XP_004247235.1|//PREDICTED: inorganic phosphate transporter 1-4-like isoform X1 [Solanum lycopersicum];gi|565370075|ref|XP_006351654.1|//PREDICTED: inorganic phosphate transporter 1-4-like [Solanum tuberosum]
Solyc05g007870.2.1	2498	9.75988985872377	86.1846982930412	3.14249497596774	1.14051520670216e-09	Up	8.16232740744053e-11	NA	NA	NA	K09422//myb proto-oncogene protein, plant	gi|999808063|ref|NP_001307310.1|//R2R3MYB transcription factor 117 [Solanum lycopersicum]
Solyc01g057830.3.1	1543	13946.1032856434	6046.08529587114	-1.20578883424481	0.000283690874365129	Down	5.51350909102349e-05	NA	GO:0003676//nucleic acid binding	NA	K02945//small subunit ribosomal protein S1	gi|970002073|ref|XP_015060504.1|//PREDICTED: 30S ribosomal protein S1, chloroplastic [Solanum pennellii]
Solyc01g006950.3.1	1563	167.735289503171	7590.72257546767	5.49997907332269	2.34128530136949e-12	Up	1.10222280290356e-13	GO:0044464//cell part	GO:0005515//protein binding	GO:0015031//protein transport	K08486//syntaxin 1B/2/3	gi|460365572|ref|XP_004228675.1|//PREDICTED: syntaxin-121-like [Solanum lycopersicum]
Solyc10g076410.1.1	612	13.3494513041311	248.289640614659	4.2171717193585	5.42306480885106e-20	Up	1.01879553588077e-21	NA	NA	NA	K14496//abscisic acid receptor PYR/PYL family	gi|460407246|ref|XP_004249065.1|//PREDICTED: abscisic acid receptor PYL4-like [Solanum lycopersicum]
Solyc05g015800.3.1	1726	2212.54908134497	75.4855714587525	-4.87336473918965	3.74660624109991e-17	Down	9.49639273873542e-19	NA	GO:0016746//transferase activity, transferring acyl groups	NA	K19861//benzyl alcohol O-benzoyltransferase [EC:2.3.1.196 2.3.1.232]	gi|460387118|ref|XP_004239236.1|//PREDICTED: methanol O-anthraniloyltransferase-like [Solanum lycopersicum]
Solyc08g007580.3.1	965	123.830317500772	31.3611074462507	-1.98131616330899	0.0171620020918994	Down	0.00538759436476728	NA	NA	NA	NA	gi|460398065|ref|XP_004244585.1|//PREDICTED: uncharacterized protein LOC101244306 [Solanum lycopersicum]
Solyc02g090980.1.1	1068	85.7197327181739	210.883571205654	1.29874745028832	0.0294796323759466	Up	0.010081840877043	NA	NA	NA	K20716	gi|460375670|ref|XP_004233627.1|//PREDICTED: mitogen-activated protein kinase kinase kinase NPK1-like [Solanum lycopersicum]
Solyc05g053280.3.1	2580	494.843564510364	166.328507215936	-1.57293706153245	7.10614717169367e-09	Down	5.74520397174727e-10	GO:0016020//membrane	GO:0016757//transferase activity, transferring glycosyl groups	NA	K20843	gi|460388462|ref|XP_004239886.1|//PREDICTED: probable beta-1,3-galactosyltransferase 16 [Solanum lycopersicum]
Solyc01g087520.3.1	516	2230.59845868685	533.099869968149	-2.0649530948186	5.14564874675356e-09	Down	4.06427228804636e-10	GO:0043231//intracellular membrane-bounded organelle	GO:0016731//oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor	GO:0044237//cellular metabolic process	K19674//WD repeat-containing protein 35;K03644//lipoyl synthase [EC:2.8.1.8]	gi|460367570|ref|XP_004229646.1|//PREDICTED: ferredoxin-thioredoxin reductase, variable chain-like [Solanum lycopersicum]
Solyc02g078890.1.1	195	41.5225176844807	120.583885940758	1.53807129946646	0.0349896871259661	Up	0.0123053413610217	NA	NA	NA	NA	gi|697122519|ref|XP_009615248.1|//PREDICTED: uncharacterized protein LOC104107998 [Nicotiana tomentosiformis]
Solyc03g121390.1.1	1040	1070.71321955216	6197.22178764768	2.53304948119337	2.44030825274506e-11	Up	1.34622641049004e-12	GO:0016020//membrane;GO:0005622//intracellular	NA	GO:0007034//vacuolar transport	K12197//charged multivesicular body protein 1;K03456//serine/threonine-protein phosphatase 2A regulatory subunit A	gi|460379736|ref|XP_004235617.1|//PREDICTED: charged multivesicular body protein 1 [Solanum lycopersicum];gi|703092944|ref|XP_010094777.1|//hypothetical protein L484_019987 [Morus notabilis];gi|698577975|ref|XP_009776620.1|//PREDICTED: serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like [Nicotiana sylvestris]
Solyc11g065810.1.1	756	146.714716535966	366.70675152134	1.32161323717412	0.0413009667810888	Up	0.01492056694656	NA	NA	NA	K19613//leucine-rich repeat protein SHOC2;K15078//structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]	gi|565392111|ref|XP_006361751.1|//PREDICTED: putative disease resistance protein RGA4 [Solanum tuberosum]
Solyc05g008900.3.1	1265	675.87999080065	226.466329028172	-1.5774705378417	6.76857810390408e-09	Down	5.44957831535441e-10	NA	NA	NA	NA	gi|460386420|ref|XP_004238896.1|//PREDICTED: uncharacterized protein LOC101245056 [Solanum lycopersicum]
Solyc12g098810.2.1	1531	103.634438056686	10.6005208210053	-3.28929644127364	3.43945079466964e-12	Down	1.65895680941647e-13	NA	GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds	GO:0006026//aminoglycan catabolic process	K00434//L-ascorbate peroxidase [EC:1.11.1.11];K20547;K01183//chitinase [EC:3.2.1.14]	gi|460415231|ref|XP_004252963.1|//PREDICTED: chitinase-like protein 1 [Solanum lycopersicum]
Solyc05g050540.3.1	2265	81.0737210241431	14.1579877859951	-2.51761812373197	0.000842891057619173	Down	0.000184142854059415	GO:0005576//extracellular region	GO:0016682//oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor;GO:0046914//transition metal ion binding	GO:0009808//lignin metabolic process	K05909//laccase [EC:1.10.3.2]	gi|971547338|ref|XP_015163414.1|//PREDICTED: laccase-6 isoform X2 [Solanum tuberosum]
Solyc08g076257.1.1	997	15.8701055684763	1.54089085559737	-3.36447514347199	0.00916049479395892	Down	0.00264694183848105	NA	NA	NA	K07418;K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30]	gi|565372754|ref|XP_006352953.1|//PREDICTED: premnaspirodiene oxygenase-like [Solanum tuberosum];gi|970045959|ref|XP_015084470.1|//PREDICTED: premnaspirodiene oxygenase-like [Solanum pennellii]
Solyc01g096435.1.1	1160	625.639386040194	13995.5710232355	4.48349520238689	2.46897673094315e-22	Up	3.60224573973345e-24	NA	GO:0016655//oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor	GO:0008152//metabolic process	K15271//ATP-dependent DNA helicase HFM1/MER3 [EC:3.6.4.12];K13436//pto-interacting protein 1 [EC:2.7.11.1]	gi|723661717|ref|XP_010327316.1|//PREDICTED: pentatricopeptide repeat-containing protein At2g13600-like [Solanum lycopersicum];gi|460368346|ref|XP_004230028.1|//PREDICTED: NAD(P)H:quinone oxidoreductase [Solanum lycopersicum]
Solyc09g007765.1.1	1458	1187.24829983667	411.103395631964	-1.53004849679287	0.0135466194985342	Down	0.00412033752452806	NA	NA	NA	K09872//aquaporin PIP	gi|723728331|ref|XP_010325989.1|//PREDICTED: aquaporin PIP2-1-like [Solanum lycopersicum]
Solyc09g074270.3.1	1808	367.190076228849	1755.45729907997	2.25724792981126	0.000247581369440431	Up	4.74908291213433e-05	NA	GO:0003824//catalytic activity;GO:0004871//signal transducer activity	NA	K14493//gibberellin receptor GID1 [EC:3.-.-.-]	gi|808688333|ref|NP_001234767.2|//putative GID1-like gibberellin receptor [Solanum lycopersicum]
Solyc01g106390.3.1	2020	515.855384806356	7019.05789853496	3.76623882278432	1.74034691321603e-08	Up	1.48294060072008e-09	GO:0044424//intracellular part	GO:0016620//oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor;GO:0016616//oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;GO:0000166//nucleotide binding	GO:0018130//heterocycle biosynthetic process;GO:0006778//porphyrin-containing compound metabolic process	K02492//glutamyl-tRNA reductase [EC:1.2.1.70]	gi|460369612|ref|XP_004230651.1|//PREDICTED: glutamyl-tRNA reductase 1, chloroplastic-like [Solanum lycopersicum]
Solyc02g077240.3.1	2165	20.4820162617424	87.4149650637034	2.09352254193876	0.00142769953759548	Up	0.000328347478267636	NA	GO:0046872//metal ion binding;GO:0019842//vitamin binding;GO:0016830//carbon-carbon lyase activity	NA	K01568//pyruvate decarboxylase [EC:4.1.1.1]	gi|460374306|ref|XP_004232952.1|//PREDICTED: pyruvate decarboxylase 1 [Solanum lycopersicum]
Solyc11g069960.2.1	2533	1342.19736072058	4424.99454498314	1.72107885134337	0.000721708500829196	Up	0.000154763269914655	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460411557|ref|XP_004251175.1|//PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g68400 [Solanum lycopersicum]
Solyc07g063520.3.1	1623	1064.04268538369	6077.69134850649	2.51396738292741	7.33187772082724e-10	Up	5.1050945215839e-11	GO:0016021//integral component of membrane	GO:0005215//transporter activity	GO:0006810//transport	NA	gi|460397275|ref|XP_004244193.1|//PREDICTED: transmembrane protein 184C [Solanum lycopersicum]
Solyc02g033060.3.1	889	732.620310797279	117.182539690399	-2.64430807530968	3.26156216935276e-09	Down	2.49954220224738e-10	NA	NA	NA	NA	gi|460371745|ref|XP_004231695.1|//PREDICTED: uncharacterized protein LOC101250461 [Solanum lycopersicum]
Solyc02g081120.3.1	2085	71.297969836613	173.838145767491	1.28581178874513	0.0023606811383551	Up	0.000574771477401802	GO:0043231//intracellular membrane-bounded organelle;GO:0005634//nucleus	GO:0003677//DNA binding;GO:0043565//sequence-specific DNA binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0006355//regulation of transcription, DNA-templated;GO:0006351//transcription, DNA-templated	K16670//homeobox protein Meis2;K15613//homeobox protein Meis1	gi|723668663|ref|XP_010315866.1|//PREDICTED: homeobox protein knotted-1-like LET6 isoform X1 [Solanum lycopersicum];gi|795881072|ref|NP_001233941.2|//homeobox protein knotted-1-like LET6 [Solanum lycopersicum]
Solyc07g017800.3.1	888	3547.9367723343	1030.18339298284	-1.78407911117489	2.8008658657551e-07	Down	2.94619184179249e-08	NA	NA	NA	NA	gi|460394641|ref|XP_004242909.1|//PREDICTED: uncharacterized protein LOC101264135 [Solanum lycopersicum]
Solyc10g007440.3.1	1765	325.623080028954	113.311876625658	-1.52290387771099	1.05174136509273e-05	Down	1.50030349046142e-06	NA	NA	NA	K02350//DNA polymerase zeta [EC:2.7.7.7]	gi|460405541|ref|XP_004248234.1|//PREDICTED: uncharacterized protein LOC101258699 [Solanum lycopersicum]
Solyc06g008090.3.1	5119	261.309587252583	679.155726009725	1.37798235600399	0.00673332930509104	Up	0.00187314580570171	NA	NA	NA	K10357//myosin V	gi|460389666|ref|XP_004240471.1|//PREDICTED: myosin-6-like isoform X3 [Solanum lycopersicum];gi|971581423|ref|XP_006364552.2|//PREDICTED: myosin-6 isoform X1 [Solanum tuberosum]
Solyc04g051690.3.1	716	174.877728958393	1021.0645259473	2.54565556402745	0.00890594981513128	Up	0.00256243576200232	NA	NA	NA	K18835//WRKY transcription factor 2	gi|460383515|ref|XP_004237467.1|//PREDICTED: probable WRKY transcription factor 51 [Solanum lycopersicum]
Solyc04g057850.1.1	765	15.1387165406334	0.770540328225532	-4.29622862279377	0.00128552497985438	Down	0.000292535038094939	NA	NA	NA	K13459//disease resistance protein RPS2	gi|971555842|ref|XP_015165543.1|//PREDICTED: probable disease resistance protein At1g12280 isoform X6 [Solanum tuberosum]
Solyc09g082810.3.1	1008	990.656595862125	189.901946957617	-2.38313034728364	0.00220605793898376	Down	0.000532519427943149	NA	NA	NA	NA	gi|970051326|ref|XP_015087252.1|//PREDICTED: probable H/ACA ribonucleoprotein complex subunit 1 [Solanum pennellii]
Solyc04g078880.3.1	890	5.16997756227823	48.1446711294404	3.21914619851031	2.06146721735031e-05	Up	3.1366144256836e-06	NA	NA	NA	NA	gi|460384919|ref|XP_004238154.1|//PREDICTED: uncharacterized protein LOC101253889 [Solanum lycopersicum]
Solyc06g007940.2.1	2997	63.9528343267462	352.75730335977	2.46359574770631	4.50832272284862e-11	Up	2.57949730862257e-12	NA	NA	NA	K10523//speckle-type POZ protein;K15095//(+)-neomenthol dehydrogenase [EC:1.1.1.208]	gi|460390000|ref|XP_004240632.1|//PREDICTED: BTB/POZ domain-containing protein At5g48800-like [Solanum lycopersicum]
Solyc01g010880.3.1	1730	282.677882421072	739.131681177079	1.38667240616439	1.16345479734062e-05	Up	1.67137124979527e-06	GO:0016021//integral component of membrane	GO:0008270//zinc ion binding	NA	K10658//E3 ubiquitin-protein ligase MARCH3 [EC:2.3.2.27];K10661//E3 ubiquitin-protein ligase MARCH6 [EC:2.3.2.27]	gi|460364967|ref|XP_004228377.1|//PREDICTED: uncharacterized protein LOC101247951 [Solanum lycopersicum]
Solyc07g052960.2.1	1275	10.4370238647087	0.742163344409707	-3.81382982554547	0.00579837169560711	Down	0.00158316209446556	NA	NA	NA	K14494//DELLA protein	gi|460395730|ref|XP_004243434.1|//PREDICTED: scarecrow-like protein 32 [Solanum lycopersicum]
Solyc01g095100.3.1	1337	179.105536588398	1308.29389005011	2.86880481829981	1.22943487731924e-10	Up	7.49722476254015e-12	NA	NA	NA	K13425//WRKY transcription factor 22	gi|460368150|ref|XP_004229932.1|//PREDICTED: WRKY transcription factor 22 [Solanum lycopersicum]
Solyc12g036470.2.1	1407	131.18443633248	454.373421843332	1.79228187882441	0.0118041833993956	Up	0.0035203992611661	NA	NA	NA	K11253//histone H3;K12126//phytochrome-interacting factor 3	gi|460413731|ref|XP_004252234.1|//PREDICTED: transcription factor BEE 1-like [Solanum lycopersicum]
Solyc07g066620.3.1	2435	603.758911138258	73.1075066652798	-3.04588112290766	3.19852970285802e-17	Down	8.07143510077114e-19	NA	NA	NA	K13237//peroxisomal 2,4-dienoyl-CoA reductase [EC:1.3.1.34]	gi|970040436|ref|XP_015081604.1|//PREDICTED: uncharacterized protein LOC107025335 isoform X1 [Solanum pennellii];gi|460396826|ref|XP_004243971.1|//PREDICTED: uncharacterized protein LOC101254711 [Solanum lycopersicum]
Solyc01g090970.3.1	369	337.561935524028	4.73102201032781	-6.15685654768388	5.55606139570778e-12	Down	2.76270534586036e-13	NA	NA	GO:0010876//lipid localization	K02883//large subunit ribosomal protein L18e;K11855//ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12]	gi|460367864|ref|XP_004229790.1|//PREDICTED: putative lipid-binding protein At4g00165 [Solanum lycopersicum]
Solyc06g060130.3.1	1659	456.699918390604	139.483100501622	-1.71115619336963	1.29504490051618e-07	Down	1.28838334556347e-08	NA	NA	NA	K00924	gi|723710686|ref|XP_010322933.1|//PREDICTED: aspartic proteinase Asp1 isoform X2 [Solanum lycopersicum];gi|460392879|ref|XP_004242040.1|//PREDICTED: aspartic proteinase Asp1 isoform X1 [Solanum lycopersicum]
Solyc07g043320.3.1	5064	1582.82952079885	18681.0767934333	3.56099983264844	3.50331689235172e-14	Up	1.28103245541861e-15	NA	NA	NA	K20283//golgin subfamily A member 4	gi|460396155|ref|XP_004243644.1|//PREDICTED: myosin heavy chain, skeletal muscle [Solanum lycopersicum]
Solyc12g006240.2.1	2598	97.6072848536819	757.041501418836	2.95531166020285	8.62612153285094e-25	Up	9.74248853605872e-27	NA	NA	NA	K12135//zinc finger protein CONSTANS	gi|460412319|ref|XP_004251549.1|//PREDICTED: zinc finger protein CONSTANS-LIKE 9-like [Solanum lycopersicum]
Solyc02g077840.1.1	465	44.9196629567602	460.032210187776	3.35631587024039	9.051366970805e-25	Up	1.03577220069969e-26	NA	NA	NA	K09286//EREBP-like factor	gi|460374223|ref|XP_004232911.1|//PREDICTED: ethylene-responsive transcription factor 12 [Solanum lycopersicum]
Solyc12g057140.1.1	411	418.843537399423	4151.36643321592	3.30910296295772	4.77196740204171e-13	Up	2.01707582895307e-14	NA	NA	NA	NA	NA
Solyc11g031970.2.1	1288	545.032571293122	59.4193941837742	-3.19733664708664	4.95964485001087e-08	Down	4.56624525850859e-09	NA	NA	NA	NA	gi|723743522|ref|XP_010312982.1|//PREDICTED: uncharacterized protein LOC101253651 isoform X1 [Solanum lycopersicum];gi|460410470|ref|XP_004250651.1|//PREDICTED: uncharacterized protein LOC101253651 isoform X2 [Solanum lycopersicum]
Solyc05g006630.3.1	4723	424.608884950674	1189.34381555961	1.48595936461992	0.00184667272225687	Up	0.000437645190402162	NA	NA	NA	K03283//heat shock 70kDa protein 1/8;K14802//phospholipid-transporting ATPase [EC:3.6.3.1];K19613//leucine-rich repeat protein SHOC2	gi|460387404|ref|XP_004239367.1|//PREDICTED: TMV resistance protein N [Solanum lycopersicum]
Solyc10g005100.3.1	1032	1186.87067732273	477.69051346351	-1.31301461449231	0.012215271304044	Down	0.00365756949401316	NA	NA	NA	NA	gi|460405902|ref|XP_004248413.1|//PREDICTED: plasma membrane-associated cation-binding protein 1 [Solanum lycopersicum]
Solyc12g096400.2.1	1594	15.2627489318301	2.30408381462418	-2.72774972230166	0.0389881822846548	Down	0.0139498867507977	NA	NA	NA	K17046//protein DEK;K11654//SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:3.6.4.-];K11294//nucleolin;K11252//histone H2B	gi|460415425|ref|XP_004253059.1|//PREDICTED: uncharacterized protein LOC101256165 isoform X1 [Solanum lycopersicum]
Solyc12g056560.2.1	4111	684.507308144552	2907.06424328095	2.08642510436157	3.17834778262093e-08	Up	2.82435556648587e-09	NA	NA	NA	K20478//golgin subfamily B member 1	gi|723751883|ref|XP_010314479.1|//PREDICTED: uncharacterized protein LOC104644273 [Solanum lycopersicum];gi|460414453|ref|XP_004252585.1|//PREDICTED: uncharacterized protein LOC101257050 [Solanum lycopersicum]
Solyc01g079530.3.1	936	343.719694238421	1017.75829860287	1.56609056314102	0.0393439330657297	Up	0.0141006380060754	NA	NA	NA	K10661//E3 ubiquitin-protein ligase MARCH6 [EC:2.3.2.27]	gi|969998005|ref|XP_015070518.1|//PREDICTED: uncharacterized protein LOC107014909 [Solanum pennellii]
Solyc07g055250.3.1	538	246.589754200131	606.093670878971	1.29742792027798	4.65275341095707e-07	Up	5.09360994780861e-08	NA	NA	NA	NA	gi|460395402|ref|XP_004243272.1|//PREDICTED: uncharacterized protein LOC101268486 [Solanum lycopersicum]
Solyc05g007220.3.1	3811	421.246131947762	1034.57832444447	1.29630752686164	0.000782874249083963	Up	0.000169542991918064	NA	NA	NA	K14572//midasin;K15542//polyadenylation factor subunit 2;K11323//histone arginine demethylase JMJD6 [EC:1.14.11.-];K06027//vesicle-fusing ATPase [EC:3.6.4.6];K14792//rRNA biogenesis protein RRP5	gi|723697382|ref|XP_010320676.1|//PREDICTED: F-box/kelch-repeat protein At1g26930 [Solanum lycopersicum]
Solyc09g047870.3.1	1626	524.65027566572	252.228538361512	-1.05662454495213	0.0182923798850338	Down	0.00580245090284918	NA	GO:0016741//transferase activity, transferring one-carbon groups;GO:0003676//nucleic acid binding	GO:0006730//one-carbon metabolic process;GO:0001897//cytolysis by symbiont of host cells	K06442//23S rRNA (cytidine1920-2'-O)/16S rRNA (cytidine1409-2'-O)-methyltransferase [EC:2.1.1.226 2.1.1.227]	gi|723729496|ref|XP_010326241.1|//PREDICTED: uncharacterized protein LOC101262851 isoform X3 [Solanum lycopersicum];gi|460403003|ref|XP_004246995.1|//PREDICTED: uncharacterized protein LOC101262851 isoform X1 [Solanum lycopersicum]
Solyc03g096820.3.1	2555	659.182341036952	252.444507363756	-1.38471130653747	0.00238763129826247	Down	0.0005824011933737	NA	NA	NA	K03695//ATP-dependent Clp protease ATP-binding subunit ClpB	gi|460379105|ref|XP_004235305.1|//PREDICTED: aluminum-activated malate transporter 4-like [Solanum lycopersicum]
Solyc10g005690.3.1	1657	216.324771135125	81.5219786642125	-1.40793790286223	0.000903835465702898	Down	0.000198973172075492	GO:0016020//membrane	GO:0005216//ion channel activity	GO:0006810//transport	NA	gi|460405669|ref|XP_004248298.1|//PREDICTED: chloride channel protein CLC-f-like isoform X2 [Solanum lycopersicum];gi|723734967|ref|XP_010327221.1|//PREDICTED: chloride channel protein CLC-f-like isoform X1 [Solanum lycopersicum]
Solyc01g005850.2.1	888	33.4877682521879	10.7150387797609	-1.64399716134317	0.0225946181865591	Down	0.00742049199830057	NA	NA	NA	K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]	gi|970002601|ref|XP_015062051.1|//PREDICTED: extensin-2-like isoform X4 [Solanum pennellii]
Solyc07g042400.2.1	682	84.2742890976228	5.82942841356616	-3.85366621578612	3.1621873614775e-07	Down	3.36044288339509e-08	NA	NA	NA	NA	gi|460396240|ref|XP_004243685.1|//PREDICTED: uncharacterized protein LOC101244203 [Solanum lycopersicum]
Solyc11g007900.2.1	4993	1689.63630492678	192.129617812599	-3.13656089863429	2.28790938549803e-14	Down	8.09313406455058e-16	NA	NA	NA	K20283//golgin subfamily A member 4;K20478//golgin subfamily B member 1	gi|460409190|ref|XP_004250022.1|//PREDICTED: girdin-like [Solanum lycopersicum];gi|971574004|ref|XP_006360525.2|//PREDICTED: CAP-Gly domain-containing linker protein 1-like [Solanum tuberosum]
Solyc01g060205.1.1	1624	106.954652482256	31.4290604060974	-1.76682819298414	0.0194403923471766	Down	0.0062195052749298	NA	NA	NA	NA	gi|565368276|ref|XP_006350773.1|//PREDICTED: factor of DNA methylation 4 [Solanum tuberosum]
Solyc06g074650.3.1	4172	1331.87783363907	3080.12291880421	1.20952616843908	0.00356579994864216	Up	0.000916045717418854	GO:0030119//AP-type membrane coat adaptor complex	GO:0022892//substrate-specific transporter activity	GO:0015031//protein transport	K11824//AP-2 complex subunit alpha	gi|460391383|ref|XP_004241300.1|//PREDICTED: AP-2 complex subunit alpha-1-like [Solanum lycopersicum]
Solyc10g006720.3.1	2978	4.08822747982906	21.9470176358417	2.42447752730361	0.0382887808328653	Up	0.0136397002542006	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|723735235|ref|XP_010327263.1|//PREDICTED: uncharacterized protein LOC101244232 [Solanum lycopersicum]
Solyc08g062680.1.1	474	470.280090954251	2585.01373898857	2.45857978537393	0.000182904347889975	Up	3.40815131616961e-05	NA	GO:0016787//hydrolase activity	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K07936//GTP-binding nuclear protein Ran	gi|460399084|ref|XP_004245073.1|//PREDICTED: uncharacterized protein LOC101251309 [Solanum lycopersicum]
Solyc02g091670.1.1	1518	390.9692698847	150.703156442786	-1.37534558224796	0.00855520200138852	Down	0.00244971901650017	NA	NA	NA	K17604//zinc finger SWIM domain-containing protein 3;K04422//mitogen-activated protein kinase kinase kinase 13 [EC:2.7.11.25];K03255//protein TIF31	gi|460372311|ref|XP_004231974.1|//PREDICTED: uncharacterized protein LOC101251835 [Solanum lycopersicum]
Solyc07g065380.4.1	1324	808.478437919931	1982.91864778693	1.29434428733288	0.0199594955680472	Up	0.00641757152117099	GO:0044464//cell part	GO:0008324//cation transmembrane transporter activity	GO:0006812//cation transport	K14709//solute carrier family 39 (zinc transporter), member 1/2/3	gi|350538565|ref|NP_001234349.1|//zinc transporter-like precursor [Solanum lycopersicum]
Solyc05g056070.3.1	827	29381.5123628405	3451.4102301491	-3.08965079211126	1.9595316886086e-08	Down	1.68431492244351e-09	GO:0031224//intrinsic component of membrane;GO:0009521//photosystem;GO:0009534//chloroplast thylakoid	GO:0043169//cation binding;GO:0046906//tetrapyrrole binding	GO:0006464//cellular protein modification process;GO:0006091//generation of precursor metabolites and energy	K08907//light-harvesting complex I chlorophyll a/b binding protein 1	gi|918410125|ref|NP_001234032.2|//chlorophyll a-b binding protein 6A, chloroplastic [Solanum lycopersicum]
Solyc02g086300.3.1	1584	3.63274894046865	34.6762867427158	3.25481584847563	0.000807731408847265	Up	0.000175468117293941	NA	NA	NA	NA	gi|460373047|ref|XP_004232334.1|//PREDICTED: uncharacterized protein LOC101261981 [Solanum lycopersicum]
Solyc09g075890.3.1	1269	95.9399709807905	1127.88995328625	3.55535049938919	9.59828582293873e-21	Up	1.63143668378562e-22	NA	GO:0003824//catalytic activity	NA	K07025//putative hydrolase of the HAD superfamily	gi|460403780|ref|XP_004247365.1|//PREDICTED: uncharacterized protein LOC101255829 [Solanum lycopersicum]
Solyc12g062800.1.1	2121	445.372012236022	9.19352820385556	-5.59824845847977	1.35040031122748e-13	Down	5.29529270691558e-15	NA	NA	NA	NA	NA
Solyc11g066660.2.1	4315	4663.75753251535	385.672243955088	-3.59604555817041	1.03106841464213e-27	Down	8.83948618486994e-30	NA	NA	NA	K16075//magnesium transporter	gi|460411196|ref|XP_004251000.1|//PREDICTED: magnesium transporter MRS2-11, chloroplastic [Solanum lycopersicum]
Solyc02g080830.1.1	1248	0.435286969004819	10.750465019114	4.62628842430992	0.00270729794459156	Up	0.000671375176135667	NA	NA	NA	NA	gi|460375998|ref|XP_004233789.1|//PREDICTED: probable F-box protein At4g22030 [Solanum lycopersicum]
Solyc11g007970.2.1	1926	3.88875677250391	90.7186877511469	4.54401886438434	5.23612151602861e-11	Up	3.02909668737006e-12	NA	GO:0003824//catalytic activity	NA	K10526//OPC-8:0 CoA ligase 1 [EC:6.2.1.-]	gi|460410152|ref|XP_004250495.1|//PREDICTED: 4-coumarate--CoA ligase-like 5 [Solanum lycopersicum]
Solyc07g063390.3.1	2957	679.084824972831	237.566447549301	-1.51526070080977	7.49677476425028e-06	Down	1.04202598389329e-06	NA	NA	NA	K05350//beta-glucosidase [EC:3.2.1.21]	gi|460397300|ref|XP_004244205.1|//PREDICTED: beta-glucosidase 18-like [Solanum lycopersicum]
Solyc02g071860.3.1	3670	3247.42843896531	465.747964499867	-2.80167636533012	1.59683390037323e-13	Down	6.33305229609781e-15	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460374453|ref|XP_004233025.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g07650 [Solanum lycopersicum]
Solyc08g008305.1.1	1005	131.145376149034	13.6187551128327	-3.26750020467871	2.72502202111096e-07	Down	2.86234980449183e-08	NA	NA	NA	K09286//EREBP-like factor	gi|460398161|ref|XP_004244631.1|//PREDICTED: ethylene-responsive transcription factor ERF061-like [Solanum lycopersicum]
Solyc09g008160.3.1	569	2502.73087023573	1037.54134779261	-1.27033432849917	0.00457022931344651	Down	0.00120882463128882	NA	NA	NA	NA	gi|460402263|ref|XP_004246633.1|//PREDICTED: uncharacterized protein LOC101263743 [Solanum lycopersicum]
Solyc04g016250.3.1	1103	15.1866752539602	45.1105062315008	1.57065741402076	0.0241136477787787	Up	0.00800672336414794	NA	NA	NA	K15414//complement component 1 Q subcomponent-binding protein, mitochondrial	gi|723688782|ref|XP_010319170.1|//PREDICTED: uncharacterized protein LOC101247905 [Solanum lycopersicum]
Solyc08g008087.1.1	1180	284.869493027656	823.228773651528	1.53099227825849	0.00741372943593232	Up	0.00209136366375189	NA	GO:0016846//carbon-sulfur lyase activity;GO:0048037//cofactor binding;GO:0016740//transferase activity;GO:0016847//1-aminocyclopropane-1-carboxylate synthase activity;GO:0030170//pyridoxal phosphate binding	GO:0042218//1-aminocyclopropane-1-carboxylate biosynthetic process;GO:0008652//cellular amino acid biosynthetic process	K20772;K01762//1-aminocyclopropane-1-carboxylate synthase [EC:4.4.1.14]	gi|834400256|ref|NP_001234164.2|//1-aminocyclopropane-1-carboxylate synthase [Solanum lycopersicum]
Solyc00g009760.2.1	478	751.600891846362	4684.8220560711	2.63995556716962	0.00878757532590823	Up	0.00252411866189984	NA	NA	NA	NA	gi|920705181|gb|KOM48406.1|//hypothetical protein LR48_Vigan07g211000 [Vigna angularis]
Solyc07g018010.3.1	1132	330.363456352877	4099.29200804636	3.63324874741859	5.4237375585339e-31	Up	3.69965697484607e-33	NA	NA	NA	K16190//glucuronokinase [EC:2.7.1.43];K13422//transcription factor MYC2	gi|460394659|ref|XP_004242918.1|//PREDICTED: transcription factor bHLH35 [Solanum lycopersicum]
Solyc07g066010.3.1	1598	2113.99625705334	139.976176801902	-3.91671960817155	1.00877801095619e-40	Down	3.00813481722436e-43	GO:0031224//intrinsic component of membrane;GO:0005886//plasma membrane	GO:0015171//amino acid transmembrane transporter activity	GO:0003333//amino acid transmembrane transport	K14209//solute carrier family 36 (proton-coupled amino acid transporter)	gi|460396910|ref|XP_004244013.1|//PREDICTED: probable amino acid permease 7 isoform X1 [Solanum lycopersicum];gi|723717889|ref|XP_010324231.1|//PREDICTED: probable amino acid permease 7 isoform X2 [Solanum lycopersicum]
Solyc02g093940.3.1	2167	1361.54515909858	178.253256652979	-2.93324449402987	1.51808214442172e-11	Down	8.02385746529743e-13	NA	NA	NA	K15032//mTERF domain-containing protein, mitochondrial	gi|460371944|ref|XP_004231794.1|//PREDICTED: uncharacterized protein LOC101247175 [Solanum lycopersicum]
Solyc01g010870.3.1	2509	1152.21187427213	506.262691255174	-1.1864479562147	2.44559199903752e-06	Down	3.09664381270704e-07	GO:0016021//integral component of membrane	GO:0016741//transferase activity, transferring one-carbon groups;GO:0008168//methyltransferase activity	GO:0006730//one-carbon metabolic process;GO:0032259//methylation	K16302//metal transporter CNNM;K15449//tRNA wybutosine-synthesizing protein 1 [EC:4.1.3.44]	gi|460364965|ref|XP_004228376.1|//PREDICTED: probable methyltransferase PMT2 [Solanum lycopersicum]
Solyc02g065540.2.1	1399	546.779612650381	2771.14984598168	2.34145336820608	1.2198102853273e-16	Up	3.26913521377043e-18	NA	NA	NA	K10666//E3 ubiquitin-protein ligase RNF5 [EC:2.3.2.27]	gi|970006023|ref|XP_015063858.1|//PREDICTED: E3 ubiquitin-protein ligase RNF185-like [Solanum pennellii];gi|460375226|ref|XP_004233408.1|//PREDICTED: E3 ubiquitin-protein ligase RNF185-like [Solanum lycopersicum]
Solyc12g043030.2.1	4664	423.80367800304	202.808246637126	-1.0632797915284	0.00180960070707728	Down	0.000428050025611766	GO:0016020//membrane;GO:0016021//integral component of membrane	GO:0008271//secondary active sulfate transmembrane transporter activity;GO:0005215//transporter activity	GO:0006810//transport;GO:1902358//sulfate transmembrane transport	K17471//sulfate transporter 3	gi|661898102|emb|CDO98069.1|//unnamed protein product [Coffea canephora];gi|460413936|ref|XP_004252331.1|//PREDICTED: probable sulfate transporter 3.4 [Solanum lycopersicum]
Solyc04g077780.3.1	975	2079.21931786945	879.26814416099	-1.24166683691357	4.61754337300299e-05	Down	7.48707084857724e-06	NA	NA	NA	K09377//cysteine and glycine-rich protein	gi|460384779|ref|XP_004238086.1|//PREDICTED: LIM domain-containing protein WLIM1 [Solanum lycopersicum]
Solyc08g065890.3.1	3518	1600.89033979774	3337.12695419918	1.05973208462238	6.23330923081006e-05	Up	1.04415132262041e-05	NA	NA	NA	K12471//epsin	gi|723722516|ref|XP_010325061.1|//PREDICTED: clathrin interactor EPSIN 1 [Solanum lycopersicum]
Solyc08g005240.2.1	3557	237.800184841887	54.7035158745051	-2.12004437127133	0.00159765673570901	Down	0.000372318097198924	NA	NA	NA	K11446//histone demethylase JARID1 [EC:1.14.11.-]	gi|460398229|ref|XP_004244665.1|//PREDICTED: lysine-specific demethylase JMJ706-like [Solanum lycopersicum];gi|697143752|ref|XP_009625994.1|//PREDICTED: lysine-specific demethylase JMJ706-like [Nicotiana tomentosiformis]
Solyc03g119660.2.1	2770	11.3690816388783	2520.69560694016	7.79256237989526	2.15041581644993e-63	Up	1.2023347713862e-66	NA	NA	NA	K14006//protein transport protein SEC23	gi|460381357|ref|XP_004236417.1|//PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 2 [Solanum lycopersicum]
Solyc02g088100.3.1	1664	969.820608659933	109.693776753339	-3.14423623150648	1.41525822299213e-06	Down	1.70972562275142e-07	GO:0044464//cell part	NA	NA	K20628	gi|350538399|ref|NP_001234085.1|//expansin precursor [Solanum lycopersicum]
Solyc11g005390.2.1	732	57.533304288605	9.24744587536362	-2.63727047386656	1.13737963866208e-05	Down	1.63009717856556e-06	NA	NA	NA	NA	gi|460408884|ref|XP_004249871.1|//PREDICTED: uncharacterized protein LOC101263658 [Solanum lycopersicum]
Solyc08g079600.3.1	590	614.047183953132	158.480915142242	-1.95404040172142	0.00130902835996121	Down	0.000298420212074056	NA	NA	NA	NA	gi|460400355|ref|XP_004245700.1|//PREDICTED: uncharacterized protein At4g22758-like [Solanum lycopersicum]
Solyc07g062480.1.1	894	1.55025369611898	21.4983159444394	3.79364741745413	0.00140591466284262	Up	0.000322904673263999	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723718854|ref|XP_004244276.2|//PREDICTED: epidermis-specific secreted glycoprotein EP1-like [Solanum lycopersicum]
Solyc10g077080.2.1	2568	5.4579124112497	0.432091583709724	-3.65894020691717	0.0320129534990785	Down	0.011110504324956	NA	GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds	GO:0019566//arabinose metabolic process	K01209//alpha-N-arabinofuranosidase [EC:3.2.1.55]	gi|460407327|ref|XP_004249104.1|//PREDICTED: alpha-L-arabinofuranosidase 1-like [Solanum lycopersicum]
Solyc01g091050.3.1	1874	168.164321028964	37.1072620489256	-2.1800981841966	0.00297823890914592	Down	0.000746224912303522	NA	GO:0016788//hydrolase activity, acting on ester bonds	NA	K01051//pectinesterase [EC:3.1.1.11]	gi|723660604|ref|XP_010325628.1|//PREDICTED: pectinesterase 2 [Solanum lycopersicum]
Solyc03g097760.2.1	939	18.6274258371165	3.43611170425973	-2.43857947621252	0.0296757498382168	Down	0.0101643978404419	NA	NA	NA	NA	gi|723683910|ref|XP_004235473.2|//PREDICTED: uncharacterized protein LOC101263296 [Solanum lycopersicum]
Solyc01g080530.3.1	1352	332.274192131531	889.046149173261	1.41988406664646	0.000799956237689559	Up	0.000173570346637503	NA	GO:0019842//vitamin binding;GO:0046914//transition metal ion binding;GO:0019798//procollagen-proline dioxygenase activity	GO:0008152//metabolic process	K00472//prolyl 4-hydroxylase [EC:1.14.11.2]	gi|460367238|ref|XP_004229482.1|//PREDICTED: probable prolyl 4-hydroxylase 4 [Solanum lycopersicum]
Solyc04g007910.3.1	2236	426.30052462876	158.590182744286	-1.42656736454086	0.0134015401780729	Down	0.00406721858244631	NA	NA	NA	K19891//glucan endo-1,3-beta-glucosidase 1/2/3 [EC:3.2.1.39]	gi|460382426|ref|XP_004236940.1|//PREDICTED: glucan endo-1,3-beta-glucosidase 3 [Solanum lycopersicum]
Solyc03g083420.3.1	2181	9248.75989358238	2018.29290114178	-2.19612437877469	0.00520944099294931	Down	0.00139867315760451	NA	GO:0005524//ATP binding;GO:0004672//protein kinase activity	GO:0006468//protein phosphorylation	NA	gi|723682133|ref|XP_010318012.1|//PREDICTED: probable plastid-lipid-associated protein 14, chloroplastic isoform X2 [Solanum lycopersicum];gi|460378393|ref|XP_004234957.1|//PREDICTED: probable plastid-lipid-associated protein 14, chloroplastic isoform X1 [Solanum lycopersicum]
Solyc09g061430.3.1	4311	522.166559987179	1622.00922552762	1.63520005097514	0.00082074049731499	Up	0.00017847771214163	GO:0044464//cell part	GO:0032561//guanyl ribonucleotide binding	NA	K14538//nuclear GTP-binding protein	gi|350540086|ref|NP_001234382.1|//nuclear GTPase-like [Solanum lycopersicum]
Solyc01g108360.3.1	755	7.81624698946128	105.886362619807	3.75989692615864	0.00219827989874568	Up	0.000530150251412128	NA	NA	NA	NA	gi|970000503|ref|XP_015088388.1|//PREDICTED: uncharacterized protein LOC107031498 [Solanum pennellii]
Solyc06g005810.3.1	1166	223.822725856591	1243.6345004378	2.4741341120378	1.5309902791182e-07	Up	1.53966444500555e-08	GO:0016020//membrane	GO:0032561//guanyl ribonucleotide binding	GO:0006810//transport;GO:0035556//intracellular signal transduction	K07904//Ras-related protein Rab-11A	gi|460389486|ref|XP_004240383.1|//PREDICTED: ras-related protein Rab2BV [Solanum lycopersicum]
Solyc08g077210.3.1	2317	2454.48339439802	892.58502181404	-1.45935790380649	0.0148310159035898	Down	0.00456849244920478	NA	GO:0016791//phosphatase activity	NA	K20279//synaptojanin [EC:3.1.3.36]	gi|350537047|ref|NP_001234789.1|//inositol-1,4,5-triphosphate-5-phosphatase [Solanum lycopersicum]
Solyc01g102310.3.1	2747	1188.28066331816	430.845400806951	-1.46363344196666	0.000198402734410174	Down	3.72800128284512e-05	NA	NA	NA	K03243//translation initiation factor 5B;K11294//nucleolin;K20478//golgin subfamily B member 1	gi|460369033|ref|XP_004230369.1|//PREDICTED: probable serine/threonine-protein kinase kinX isoform X1 [Solanum lycopersicum]
Solyc06g069570.3.1	1600	1013.13570317625	9715.73650822747	3.26149593742801	8.94223319780578e-16	Up	2.62320617514282e-17	GO:0005886//plasma membrane	NA	NA	K18211//synaptosomal-associated protein 25	gi|723708649|ref|XP_010322574.1|//PREDICTED: SNAP25 homologous protein SNAP33-like [Solanum lycopersicum]
Solyc09g065910.2.1	521	13377.5481316364	2755.08843526769	-2.27964318612609	4.06186010689877e-12	Down	1.97581908435325e-13	NA	NA	NA	K02721//photosystem II PsbW protein	gi|460403473|ref|XP_004247215.1|//PREDICTED: photosystem II reaction center W protein, chloroplastic-like [Solanum lycopersicum]
Solyc07g005895.1.1	956	846.873532924437	131.394014689723	-2.68824698315097	1.73205057662742e-08	Down	1.47393449621306e-09	NA	NA	NA	K20843	gi|723712215|ref|XP_010323199.1|//PREDICTED: uncharacterized protein LOC104648141 [Solanum lycopersicum]
Solyc11g005750.2.1	1740	18.1312930981045	2.57685193647152	-2.81480027094592	0.022360651226931	Down	0.00733213988531803	NA	NA	NA	K01051//pectinesterase [EC:3.1.1.11]	gi|460408927|ref|XP_004249892.1|//PREDICTED: probable pectinesterase/pectinesterase inhibitor 51 [Solanum lycopersicum]
Solyc08g080670.1.1	753	2.04788569951958	1328.05442548706	9.34096336102143	3.00379320287111e-27	Up	2.72074604255882e-29	NA	NA	GO:0006950//response to stress	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|930425318|ref|NP_001234351.2|//PR5-like protein precursor [Solanum lycopersicum]
Solyc12g094580.2.1	2500	445.035274759371	42.1105232659212	-3.40166698503733	1.91078078850081e-10	Down	1.20652402554062e-11	NA	NA	NA	K16251//DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6]	gi|970064896|ref|XP_015059429.1|//PREDICTED: uncharacterized protein LOC107005365 [Solanum pennellii];gi|460415710|ref|XP_004253200.1|//PREDICTED: uncharacterized protein LOC101248373 [Solanum lycopersicum]
Solyc06g066090.3.1	1312	396.613630233407	138.917424338453	-1.51350669169966	0.000298553638281776	Down	5.83686384668225e-05	NA	GO:0032559//adenyl ribonucleotide binding	NA	K18798//peroxisome-assembly ATPase [EC:3.6.4.7]	gi|460392336|ref|XP_004241772.1|//PREDICTED: lactation elevated protein 1 [Solanum lycopersicum]
Solyc03g112030.2.1	1587	7.69789842561996	88.4368047038872	3.52211036039939	9.81012705987971e-07	Up	1.14819587624953e-07	NA	NA	NA	K07408//cytochrome P450, family 1, subfamily A, polypeptide 1 [EC:1.14.14.1]	gi|723688458|ref|XP_004236280.2|//PREDICTED: uncharacterized protein LOC101247804 [Solanum lycopersicum]
Solyc01g102290.3.1	1191	1385.35874261706	8881.2843606279	2.68050871131118	3.43589994023843e-12	Up	1.65596340492332e-13	GO:0031224//intrinsic component of membrane;GO:0031410//cytoplasmic vesicle	NA	GO:0006970//response to osmotic stress;GO:0009725//response to hormone	NA	gi|460369029|ref|XP_004230367.1|//PREDICTED: hydrophobic protein LTI6A [Solanum lycopersicum]
Solyc11g006060.1.1	1356	6335.82415429798	603.007930692141	-3.39328341360813	1.43023922666608e-07	Down	1.43141207827584e-08	NA	NA	NA	K05658//ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:3.6.3.44]	gi|460408969|ref|XP_004249913.1|//PREDICTED: rubisco accumulation factor 1, chloroplastic [Solanum lycopersicum]
Solyc01g066870.3.1	2011	480.650564538304	109.145029609358	-2.13874199579607	6.36891372644895e-09	Down	5.11117908641888e-10	NA	NA	NA	K01102//pyruvate dehydrogenase phosphatase [EC:3.1.3.43]	gi|460366742|ref|XP_004229238.1|//PREDICTED: probable protein phosphatase 2C 40 [Solanum lycopersicum]
Solyc01g097340.3.1	1687	3278.36433522773	275.961287864029	-3.57043839115951	6.63116215142611e-14	Down	2.50880780665629e-15	NA	GO:0016857//racemase and epimerase activity, acting on carbohydrates and derivatives;GO:0048037//cofactor binding	GO:0008152//metabolic process	K10046//GDP-D-mannose 3', 5'-epimerase [EC:5.1.3.18 5.1.3.-]	gi|568214776|ref|NP_001274772.1|//NAD-dependent epimerase/dehydratase family protein-like protein [Solanum tuberosum]
Solyc03g122240.3.1	3327	281.418041713732	744.016985954088	1.40262073579262	0.00111286284077286	Up	0.000250257250573382	GO:0000145//exocyst	NA	GO:0006887//exocytosis	K07195//exocyst complex component 7	gi|460379614|ref|XP_004235556.1|//PREDICTED: exocyst complex component EXO70A1 [Solanum lycopersicum]
Solyc07g007125.1.1	1182	12.7357505688543	107.641182011123	3.07927424742193	6.73310565782929e-09	Up	5.41850869064165e-10	NA	GO:0005524//ATP binding;GO:0004672//protein kinase activity	GO:0006468//protein phosphorylation	K14510//serine/threonine-protein kinase CTR1 [EC:2.7.11.1];K04422//mitogen-activated protein kinase kinase kinase 13 [EC:2.7.11.25]	gi|731407573|ref|XP_010656540.1|//PREDICTED: uncharacterized protein LOC100251651 isoform X1 [Vitis vinifera];gi|970041832|ref|XP_015082306.1|//PREDICTED: uncharacterized protein LOC107026002 [Solanum pennellii]
Solyc04g024840.3.1	1420	25.9249848206592	106.560588570313	2.03925890659954	0.00112166237821698	Up	0.000252319682888753	NA	NA	NA	K21026;K01188//beta-glucosidase [EC:3.2.1.21];K00679//phospholipid:diacylglycerol acyltransferase [EC:2.3.1.158]	gi|460383032|ref|XP_004237239.1|//PREDICTED: GDSL esterase/lipase 1 [Solanum lycopersicum]
Solyc00g231780.2.1	735	96.213719886056	7.59163244219954	-3.66376058473478	0.000685276045396845	Down	0.000146056673161591	GO:0009534//chloroplast thylakoid	GO:0050136//NADH dehydrogenase (quinone) activity;GO:0043169//cation binding;GO:0048037//cofactor binding;GO:0051536//iron-sulfur cluster binding	GO:0008152//metabolic process	K05580//NAD(P)H-quinone oxidoreductase subunit I [EC:1.6.5.3];K01078//acid phosphatase [EC:3.1.3.2];K14379//tartrate-resistant acid phosphatase type 5 [EC:3.1.3.2]	gi|75300873|sp|Q8HVR5.1|NDHI_HULAL//RecName: Full=NAD(P)H-quinone oxidoreductase subunit I, chloroplastic; AltName: Full=NAD(P)H dehydrogenase subunit I; Short=NDH subunit I; AltName: Full=NADH-plastoquinone oxidoreductase subunit I;gi|970023107|ref|XP_015072888.1|//PREDICTED: purple acid phosphatase 8-like isoform X1 [Solanum pennellii]
Solyc12g095820.2.1	1490	204.049086935928	408.861775021646	1.00269693493377	0.00341086741262612	Up	0.000869244837487879	NA	NA	NA	NA	gi|723753664|ref|XP_010314831.1|//PREDICTED: thioredoxin-related transmembrane protein 2 isoform X2 [Solanum lycopersicum];gi|460415522|ref|XP_004253107.1|//PREDICTED: thioredoxin-related transmembrane protein 2 isoform X1 [Solanum lycopersicum]
Solyc10g055610.2.1	1972	237.030265087447	65.9971112886115	-1.84459649684491	3.23933196427192e-05	Down	5.12439423601089e-06	NA	NA	GO:0006511//ubiquitin-dependent protein catabolic process	K03094//S-phase kinase-associated protein 1;K10532//heparan-alpha-glucosaminide N-acetyltransferase [EC:2.3.1.78]	gi|460406399|ref|XP_004248652.1|//PREDICTED: SKP1-like protein 1B [Solanum lycopersicum];gi|698465823|ref|XP_009782766.1|//PREDICTED: heparan-alpha-glucosaminide N-acetyltransferase-like isoform X1 [Nicotiana sylvestris]
Solyc09g010390.2.1	1102	317.853884689457	785.878275449235	1.30594215039154	1.88669219950474e-05	Up	2.84185298128771e-06	NA	NA	NA	NA	gi|460401928|ref|XP_004246467.1|//PREDICTED: FK506-binding protein 5 [Solanum lycopersicum]
Solyc10g075070.2.1	485	6265.66704869564	2018.382509638	-1.63426849861044	0.00606375972420585	Down	0.00166421137801281	NA	GO:0005488//binding	GO:0010876//lipid localization;GO:0051234//establishment of localization	NA	gi|460407212|ref|XP_004249048.1|//PREDICTED: non-specific lipid-transfer protein 2 [Solanum lycopersicum]
Solyc11g022395.1.1	4379	631.461707719628	241.552792334868	-1.38635672029825	6.06511608386634e-05	Down	1.01439450828643e-05	NA	GO:0003824//catalytic activity	NA	K15865//threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:2.8.4.5]	gi|460410020|ref|XP_004250429.1|//PREDICTED: threonylcarbamoyladenosine tRNA methylthiotransferase [Solanum lycopersicum];gi|460410022|ref|XP_004250430.1|//PREDICTED: multiple C2 and transmembrane domain-containing protein 1-like [Solanum lycopersicum]
Solyc10g047210.1.1	504	165.857174350355	341.737517883439	1.04294722473396	0.0145702145538316	Up	0.00447566490748942	NA	NA	NA	NA	gi|460406710|ref|XP_004248804.1|//PREDICTED: uncharacterized protein LOC101245808 [Solanum lycopersicum]
Solyc06g005170.3.1	2167	3119.01316404929	11685.8093163511	1.90559610650554	0.00130635056475032	Up	0.000297761059469518	GO:0005622//intracellular	GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0004702//receptor signaling protein serine/threonine kinase activity;GO:0004707//MAP kinase activity	GO:0000165//MAPK cascade;GO:0006464//cellular protein modification process	K04371//mitogen-activated protein kinase 1/3 [EC:2.7.11.24];K20536	gi|350538809|ref|NP_001234360.1|//mitogen-activated protein kinase 3 [Solanum lycopersicum];gi|158342648|gb|ABW34945.1|//mitogen-activated protein kinase 3 [Solanum peruvianum];gi|116242308|gb|ABJ89813.1|//wound-induced protein kinase [Nicotiana attenuata]
Solyc05g051230.3.1	3389	3523.31228223097	1588.46308122915	-1.14930079150705	0.00441014530255784	Down	0.00116204402653129	GO:0005829//cytosol;GO:0016021//integral component of membrane;GO:0009536//plastid	GO:0008641//small protein activating enzyme activity;GO:0061503//tRNA threonylcarbamoyladenosine dehydratase	GO:0061504//cyclic threonylcarbamoyladenosine biosynthetic process	K11996//adenylyltransferase and sulfurtransferase [EC:2.7.7.80];K19613//leucine-rich repeat protein SHOC2;K12164//ubiquitin-like modifier-activating enzyme 5;K02949//small subunit ribosomal protein S11e;K10406//kinesin family member C2/C3	gi|697111399|ref|XP_009609573.1|//PREDICTED: tRNA threonylcarbamoyladenosine dehydratase isoform X1 [Nicotiana tomentosiformis];gi|723702364|ref|XP_010321487.1|//PREDICTED: tRNA threonylcarbamoyladenosine dehydratase isoform X2 [Solanum lycopersicum];gi|460388767|ref|XP_004240036.1|//PREDICTED: tRNA threonylcarbamoyladenosine dehydratase isoform X1 [Solanum lycopersicum]
Solyc01g109480.3.1	592	10.1151729710172	0.805543910602503	-3.65041394708402	0.0124238726929372	Down	0.00372697083326538	NA	NA	NA	NA	gi|723665816|ref|XP_010315301.1|//PREDICTED: uncharacterized protein LOC101252635 [Solanum lycopersicum]
Solyc04g007490.3.1	4808	154.974602903461	815.840928192193	2.39625607712877	0.00188125187211982	Up	0.000446580322152281	NA	NA	NA	K13453;K13457//disease resistance protein RPM1	gi|460382456|ref|XP_004236955.1|//PREDICTED: putative late blight resistance protein homolog R1A-3 [Solanum lycopersicum]
Solyc06g066020.3.1	1049	13.4778054282267	198.931785999319	3.88361630453851	4.2793565522346e-09	Up	3.3497274339096e-10	NA	NA	NA	K14484//auxin-responsive protein IAA	gi|525313641|ref|NP_001266100.1|//IAA36 [Solanum lycopersicum]
Solyc11g006360.1.1	339	287.917494806515	104.495728492817	-1.4622114844442	0.00106856157138837	Down	0.00023913984175547	NA	NA	NA	NA	gi|460409003|ref|XP_004249930.1|//PREDICTED: uncharacterized protein LOC101256540 [Solanum lycopersicum]
Solyc03g114465.1.1	3130	259.339304709296	48.2298408681901	-2.42684291829394	0.00067128616749444	Down	0.000142724627232305	NA	GO:0016405//CoA-ligase activity	NA	NA	gi|970017906|ref|XP_015070101.1|//PREDICTED: probable acyl-activating enzyme 17, peroxisomal isoform X2 [Solanum pennellii]
Solyc11g011260.1.1	1767	2623.31763724751	1102.46905123061	-1.25065434628782	0.00544969703325617	Down	0.00147252325160556	GO:0043231//intracellular membrane-bounded organelle	NA	GO:0010476//gibberellin mediated signaling pathway	K14494//DELLA protein	gi|350538915|ref|NP_001234365.1|//DELLA protein GAI [Solanum lycopersicum]
Solyc10g079470.3.1	2508	1500.89823115998	657.411798106957	-1.19095690512313	0.00250760709961517	Down	0.000616059281107932	GO:0044464//cell part	GO:0016632//oxidoreductase activity, acting on the CH-CH group of donors, cytochrome as acceptor;GO:0050662//coenzyme binding;GO:0016899//oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor	GO:0008152//metabolic process	K00225//L-galactono-1,4-lactone dehydrogenase [EC:1.3.2.3]	gi|936975817|ref|NP_001234603.2|//L-galactono-1,4-lactone dehydrogenase [Solanum lycopersicum]
Solyc01g110520.3.1	1734	3978.18737198765	1696.82146074049	-1.22927645573268	8.75869824398686e-05	Down	1.51093094800847e-05	NA	GO:0043169//cation binding;GO:0016763//transferase activity, transferring pentosyl groups;GO:0051540//metal cluster binding	GO:0006144//purine nucleobase metabolic process;GO:0006163//purine nucleotide metabolic process	K00764//amidophosphoribosyltransferase [EC:2.4.2.14]	gi|460370120|ref|XP_004230902.1|//PREDICTED: amidophosphoribosyltransferase, chloroplastic-like [Solanum lycopersicum]
Solyc10g085140.1.1	369	63.8445483178493	320.228060746009	2.32646439432316	0.00412845942875376	Up	0.00107843460849509	NA	NA	NA	K11778//ditrans,polycis-polyprenyl diphosphate synthase [EC:2.5.1.87]	gi|723740256|ref|XP_010312432.1|//PREDICTED: dehydrodolichyl diphosphate synthase 2-like [Solanum lycopersicum]
BGI_novel_G000421	2550	118.679402429916	13.473538852046	-3.13886883530988	1.10145845069101e-07	Down	1.08224410169282e-08	NA	NA	NA	K06228//fused [EC:2.7.11.1];K16570//gamma-tubulin complex component 3;K14560//U3 small nucleolar ribonucleoprotein protein IMP3;K03549//KUP system potassium uptake protein;K17982//geranyllinalool synthase [EC:4.2.3.144]	gi|970056132|ref|XP_015089713.1|//PREDICTED: uncharacterized protein LOC107032636 [Solanum pennellii]
Solyc02g090820.3.1	1307	1595.85325198867	9039.92103435219	2.5019821770064	1.17132390841686e-17	Up	2.78990598433866e-19	GO:0043231//intracellular membrane-bounded organelle	GO:0003677//DNA binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0050896//response to stimulus;GO:0006351//transcription, DNA-templated	K09419//heat shock transcription factor, other eukaryote	gi|460372431|ref|XP_004232034.1|//PREDICTED: heat shock factor protein HSF24 [Solanum lycopersicum]
Solyc02g085120.3.1	1982	87.372716203148	21.4099298607944	-2.02890277156856	0.000747814659863166	Down	0.000161114087297193	NA	NA	NA	K05909//laccase [EC:1.10.3.2]	gi|460373220|ref|XP_004232419.1|//PREDICTED: laccase-11-like [Solanum lycopersicum]
Solyc02g091525.1.1	3153	91.4690365307553	36.5430657919619	-1.32368578043813	0.0106919238929474	Down	0.00315042710503018	NA	NA	NA	K07199//5'-AMP-activated protein kinase, regulatory beta subunit	gi|460372329|ref|XP_004231983.1|//PREDICTED: uncharacterized protein LOC101255049 [Solanum lycopersicum]
Solyc01g080890.2.1	725	223.695434005066	3448.92999018249	3.94654112982364	8.63607723017685e-51	Up	1.12666879027952e-53	NA	NA	NA	NA	gi|723659112|ref|XP_010323128.1|//PREDICTED: uncharacterized protein LOC101251813 [Solanum lycopersicum]
Solyc09g061310.3.1	1543	899.726953773476	6470.1823251596	2.84624721836554	1.09228587292194e-08	Up	9.07931078207814e-10	NA	NA	NA	NA	gi|460403215|ref|XP_004247089.1|//PREDICTED: desumoylating isopeptidase 1 [Solanum lycopersicum]
Solyc01g105720.2.1	1904	841.716287184669	293.839527125537	-1.51830555424971	0.000473959090732072	Down	9.70955405793747e-05	NA	NA	NA	NA	gi|460369510|ref|XP_004230605.1|//PREDICTED: uncharacterized protein LOC101261168 [Solanum lycopersicum]
Solyc11g006310.2.1	3099	22.2308455025851	2.85443215412312	-2.96128714222226	0.0196755621338084	Down	0.00631601092501706	NA	NA	NA	K18171//COX assembly mitochondrial protein 1	gi|723740663|ref|XP_004250460.2|//PREDICTED: protein GAMETE EXPRESSED 1 [Solanum lycopersicum]
Solyc09g015820.3.1	1274	660.923022879251	2963.81424374133	2.1649008727417	7.78673510003649e-11	Up	4.62362793139933e-12	NA	GO:0015036//disulfide oxidoreductase activity	GO:0019725//cellular homeostasis;GO:0018904//ether metabolic process	K03671//thioredoxin 1	gi|460401547|ref|XP_004246283.1|//PREDICTED: thioredoxin H9-like [Solanum lycopersicum]
Solyc09g008320.3.1	1173	314.157036039081	45.5194839143926	-2.78692978583514	1.43023922666608e-07	Down	1.43075550016163e-08	GO:0030312//external encapsulating structure;GO:0005576//extracellular region	GO:0016758//transferase activity, transferring hexosyl groups;GO:0016798//hydrolase activity, acting on glycosyl bonds	GO:0044042//glucan metabolic process	K08235//xyloglucan:xyloglucosyl transferase [EC:2.4.1.207]	gi|460402227|ref|XP_004246615.1|//PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 32 [Solanum lycopersicum]
Solyc01g009430.3.1	1125	2419.39255922534	939.256461764223	-1.36505383193953	0.0228952619016299	Down	0.00753560319783034	NA	NA	NA	NA	gi|460365130|ref|XP_004228457.1|//PREDICTED: uncharacterized protein At4g22758-like [Solanum lycopersicum]
Solyc11g044450.2.1	1294	296.928412179956	51.5733774708556	-2.52541671315232	0.000205077871353221	Down	3.86948033692412e-05	NA	NA	NA	K09519//DnaJ homolog subfamily B member 13	gi|460410660|ref|XP_004250740.1|//PREDICTED: dnaJ protein homolog 1-like [Solanum lycopersicum]
Solyc09g008260.3.1	2124	796.61506164234	304.755148807386	-1.38623216183198	0.000734121258991082	Down	0.000157813892120634	NA	NA	NA	NA	gi|460402241|ref|XP_004246622.1|//PREDICTED: uncharacterized protein LOC101260965 isoform X1 [Solanum lycopersicum];gi|723728165|ref|XP_010325966.1|//PREDICTED: uncharacterized protein LOC101260965 isoform X2 [Solanum lycopersicum]
Solyc03g096180.3.1	987	1.13961639814938	11.3947762854585	3.32175240909577	0.0147129739768351	Up	0.00452566059439394	NA	NA	NA	NA	gi|971578493|ref|XP_015158737.1|//PREDICTED: LOW QUALITY PROTEIN: mucin-5B-like [Solanum tuberosum];gi|970012721|ref|XP_015067307.1|//PREDICTED: mucin-5AC-like [Solanum pennellii]
Solyc03g098100.3.1	2356	234.266058149764	1193.49287312911	2.34897010320311	0.00191035558192218	Up	0.000454375241100545	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K19642//D-galacturonate reductase [EC:1.1.1.365];K00011//aldehyde reductase [EC:1.1.1.21]	gi|460379245|ref|XP_004235374.1|//PREDICTED: methylecgonone reductase-like [Solanum lycopersicum]
Solyc01g091860.3.1	3649	706.712312980275	234.318783544271	-1.59265043649667	0.000200597530986788	Down	3.77593435883653e-05	NA	NA	NA	K00592//[ribulose-bisphosphate carboxylase]-lysine N-methyltransferase [EC:2.1.1.127];K19199//histone-lysine N-methyltransferase SETD3 [EC:2.1.1.43]	gi|723660834|ref|XP_010326005.1|//PREDICTED: uncharacterized protein LOC101265479 isoform X2 [Solanum lycopersicum];gi|460368000|ref|XP_004229858.1|//PREDICTED: uncharacterized protein LOC101265479 isoform X1 [Solanum lycopersicum]
Solyc06g007990.3.1	893	489.852310538688	89.3853213313761	-2.45423700556617	1.86416679000304e-11	Down	9.99901599379147e-13	NA	NA	NA	NA	gi|460389652|ref|XP_004240464.1|//PREDICTED: uncharacterized protein LOC101259250 [Solanum lycopersicum]
Solyc01g096540.3.1	3932	802.823857867271	2588.22027904845	1.68880501224056	2.26262504667345e-07	Up	2.34207162465043e-08	GO:0009506//plasmodesma	NA	NA	NA	gi|971551072|ref|XP_006347850.2|//PREDICTED: uncharacterized protein LOC102587911 [Solanum tuberosum];gi|970001270|ref|XP_015057398.1|//PREDICTED: uncharacterized protein LOC107003581 [Solanum pennellii];gi|723661742|ref|XP_010327355.1|//PREDICTED: uncharacterized protein LOC101244034 [Solanum lycopersicum]
Solyc10g085690.2.1	3321	540.314889319766	136.760121773924	-1.98215282600407	2.6527373340791e-08	Down	2.32618631423795e-09	NA	NA	NA	NA	gi|460408350|ref|XP_004249608.1|//PREDICTED: uncharacterized protein LOC101258319 [Solanum lycopersicum]
Solyc01g100170.3.1	1895	414.333001529249	1125.36635508013	1.44153209676396	1.16282372261172e-05	Up	1.6700312372234e-06	GO:0044464//cell part;GO:0005622//intracellular;GO:0016021//integral component of membrane	GO:0005484//SNAP receptor activity;GO:0005515//protein binding	GO:0006886//intracellular protein transport;GO:0061025//membrane fusion;GO:0015031//protein transport;GO:0016192//vesicle-mediated transport	K08489//syntaxin 16	gi|460368849|ref|XP_004230277.1|//PREDICTED: syntaxin-43-like [Solanum lycopersicum]
Solyc04g005800.3.1	1393	902.976354889082	181.004909787743	-2.31865937897467	3.61308150087431e-05	Down	5.76546962324546e-06	NA	NA	NA	K09338//homeobox-leucine zipper protein	gi|460382550|ref|XP_004237002.1|//PREDICTED: homeobox-leucine zipper protein ATHB-54 [Solanum lycopersicum]
BGI_novel_G000535	4513	58.5471545410425	10.8491816244533	-2.432012834403	0.0464250775671749	Down	0.0171628119618026	NA	NA	NA	K09260//MADS-box transcription enhancer factor 2A	gi|723751737|ref|XP_010314461.1|//PREDICTED: agamous-like MADS-box protein AGL80 [Solanum lycopersicum]
Solyc01g057473.1.1	1206	244.820145614172	57.7402836660839	-2.08407217817797	5.42776475988625e-06	Down	7.31983483721055e-07	NA	NA	NA	K15255//ATP-dependent DNA helicase PIF1 [EC:3.6.4.12]	gi|971559375|ref|XP_015166439.1|//PREDICTED: uncharacterized protein LOC107061546 [Solanum tuberosum]
Solyc11g072630.2.1	4324	138.250649099141	704.806831565613	2.34994165405125	3.1015752443473e-10	Up	2.03010516217156e-11	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004702//receptor signaling protein serine/threonine kinase activity	GO:0006464//cellular protein modification process	K04371//mitogen-activated protein kinase 1/3 [EC:2.7.11.24]	gi|350539803|ref|NP_001233767.1|//mitogen-activated protein kinase 4 [Solanum lycopersicum]
Solyc02g067580.3.1	739	390.367760059859	1114.24967382844	1.51316672591367	0.00518862025647991	Up	0.00139095560178185	NA	NA	NA	K09490//heat shock 70kDa protein 5	gi|460375088|ref|XP_004233340.1|//PREDICTED: uncharacterized protein LOC101261386 [Solanum lycopersicum]
Solyc01g005700.3.1	2573	335.084711854228	126.723760258952	-1.4028388154059	0.0010081658504747	Down	0.00022415794312217	NA	NA	NA	K17604//zinc finger SWIM domain-containing protein 3	gi|723655977|ref|XP_010316271.1|//PREDICTED: uncharacterized protein LOC101246852 isoform X1 [Solanum lycopersicum]
Solyc03g121420.3.1	1121	2044.47961224592	344.096242492337	-2.57084963309613	0.000834688957528764	Down	0.000182070962407124	NA	GO:0042578//phosphoric ester hydrolase activity	GO:0006796//phosphate-containing compound metabolic process	K13248//pyridoxal phosphate phosphatase PHOSPHO2 [EC:3.1.3.74]	gi|460379728|ref|XP_004235613.1|//PREDICTED: inorganic pyrophosphatase 1-like [Solanum lycopersicum]
Solyc10g006510.3.1	1063	240.744123834822	498.008715231258	1.04867040520269	0.00160040009697695	Up	0.000373136372692368	NA	NA	NA	NA	gi|460405749|ref|XP_004248337.1|//PREDICTED: transcription factor ILR3-like [Solanum lycopersicum]
Solyc11g007460.1.1	1311	0.430602002345075	28.5143485542081	6.04918923448853	6.89184660006616e-06	Up	9.49979451582102e-07	NA	NA	NA	K13080//flavanone 7-O-glucoside 2''-O-beta-L-rhamnosyltransferase [EC:2.4.1.236];K18823//soyasaponin III rhamnosyltransferase [EC:2.4.1.273]	gi|460410130|ref|XP_004250484.1|//PREDICTED: crocetin glucoside glucosyltransferase-like [Solanum lycopersicum]
Solyc07g009440.2.1	834	0.908717846682786	18.9547811414386	4.38258557570297	0.00149610572988821	Up	0.000346310443663552	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460394941|ref|XP_004243048.1|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At2g19130 [Solanum lycopersicum]
Solyc06g069780.3.1	1409	422.223814931342	1341.52279684305	1.66779171164958	0.00145976506973511	Up	0.000337027912700883	GO:0016021//integral component of membrane	GO:0008270//zinc ion binding	NA	K10661//E3 ubiquitin-protein ligase MARCH6 [EC:2.3.2.27]	gi|723708605|ref|XP_010322568.1|//PREDICTED: uncharacterized protein LOC101254808 isoform X1 [Solanum lycopersicum];gi|460391955|ref|XP_004241583.1|//PREDICTED: uncharacterized protein LOC101254808 isoform X2 [Solanum lycopersicum]
Solyc06g070900.3.1	1277	121.01274064043	18.8555049657165	-2.68210125477365	0.000620648746689605	Down	0.000131171850071942	NA	NA	NA	K16221//transcription factor TCP21 (protein CCA1 HIKING EXPEDITION)	gi|350539936|ref|NP_001233815.1|//TCP transcription factor 17 [Solanum lycopersicum]
Solyc12g044800.2.1	2992	501.875543734849	1024.41669890876	1.02940112469214	0.00787165073845311	Up	0.00223286350527912	NA	NA	NA	K04354//serine/threonine-protein phosphatase 2A regulatory subunit B	gi|460414019|ref|XP_004252372.1|//PREDICTED: serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X2 [Solanum lycopersicum];gi|723751103|ref|XP_010314308.1|//PREDICTED: serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform-like isoform X1 [Solanum lycopersicum]
Solyc10g008100.3.1	1232	76.2365132797829	221.073505859293	1.53597209503296	2.43240011304914e-05	Up	3.75268527952526e-06	NA	NA	NA	K08288//protein kinase C substrate 80K-H	gi|723734232|ref|XP_010327088.1|//PREDICTED: glucosidase 2 subunit beta [Solanum lycopersicum]
Solyc01g105030.3.1	872	14667.95684685	684.348513586752	-4.42179289263013	2.30831032476082e-17	Down	5.76475293570058e-19	GO:0031224//intrinsic component of membrane;GO:0009521//photosystem;GO:0010287//plastoglobule;GO:0009535//chloroplast thylakoid membrane;GO:0009523//photosystem II;GO:0016021//integral component of membrane;GO:0009941//chloroplast envelope;GO:0009534//chloroplast thylakoid	GO:0031409//pigment binding;GO:0046906//tetrapyrrole binding;GO:0016168//chlorophyll binding	GO:0009768//photosynthesis, light harvesting in photosystem I;GO:0006464//cellular protein modification process;GO:0006091//generation of precursor metabolites and energy;GO:0009416//response to light stimulus;GO:0018298//protein-chromophore linkage	K08917//light-harvesting complex II chlorophyll a/b binding protein 6	gi|824556529|ref|NP_001296324.1|//chlorophyll a-b binding protein CP24 10A, chloroplastic [Solanum lycopersicum]
Solyc08g008420.3.1	2447	188.827800121676	2804.51898693542	3.8926102644386	1.96138940844886e-08	Up	1.68664282290574e-09	NA	NA	NA	K15382//solute carrier family 50 (sugar transporter)	gi|970045287|ref|XP_015084071.1|//PREDICTED: bidirectional sugar transporter SWEET4-like [Solanum pennellii]
Solyc06g061180.1.1	642	187.722316793909	1167.52794182563	2.63678500173395	3.08566532423748e-05	Up	4.85485065364782e-06	NA	NA	NA	K14496//abscisic acid receptor PYR/PYL family	gi|460392721|ref|XP_004241962.1|//PREDICTED: abscisic acid receptor PYR1-like [Solanum lycopersicum]
Solyc07g043160.1.1	1323	2240.91719805978	257.43123567218	-3.12183032210549	1.65983854278274e-11	Down	8.83498374494464e-13	NA	NA	NA	K12938//anthocyanidin 5,3-O-glucosyltransferase [EC:2.4.1.-];K08237//hydroquinone glucosyltransferase [EC:2.4.1.218]	gi|723716506|ref|XP_010323953.1|//PREDICTED: anthocyanidin 3-O-glucosyltransferase 6-like [Solanum lycopersicum]
Solyc02g089075.1.1	957	591.982359017189	42.1324430559228	-3.8125507060826	1.45109557649379e-09	Down	1.05419162016788e-10	NA	NA	NA	NA	gi|970007967|ref|XP_015064909.1|//PREDICTED: uncharacterized protein LOC107010182 [Solanum pennellii]
Solyc09g091760.2.1	1690	125.182320565423	43.7762023242134	-1.51581211728899	0.0437052108450798	Down	0.0159650762741085	NA	NA	NA	K18485//myogenic factor 6;K20558	gi|970050198|ref|XP_015086616.1|//PREDICTED: transcription factor FAMA [Solanum pennellii]
Solyc04g054690.3.1	2137	328.254952853745	1301.42616485848	1.98720477976428	0.0304976387884843	Up	0.0104959258585834	NA	NA	NA	K00423//L-ascorbate oxidase [EC:1.10.3.3]	gi|809281420|ref|NP_001234829.2|//ascorbate oxidase precursor [Solanum lycopersicum]
Solyc01g088600.3.1	1667	873.357173284573	177.300284138577	-2.30037693930334	0.00435491012617125	Down	0.00114554199941817	NA	NA	NA	NA	gi|460367701|ref|XP_004229709.1|//PREDICTED: protein TRIGALACTOSYLDIACYLGLYCEROL 4, chloroplastic [Solanum lycopersicum]
Solyc10g011820.3.1	1320	1500.31052785509	3287.23721685171	1.13161443488092	0.0216909002699962	Up	0.00707452577018289	NA	GO:0016705//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen;GO:0005506//iron ion binding	GO:0006631//fatty acid metabolic process	K13076//Delta8-fatty-acid desaturase [EC:1.14.19.4]	gi|723733691|ref|XP_010326991.1|//PREDICTED: delta(8)-fatty-acid desaturase-like [Solanum lycopersicum]
Solyc10g080600.2.1	584	190.795046646858	28.4500402209744	-2.74552111985171	4.79814295881306e-12	Down	2.35900945380738e-13	NA	NA	NA	K14664//IAA-amino acid hydrolase [EC:3.5.1.-];K08081//tropinone reductase I [EC:1.1.1.206];K10773//endonuclease III [EC:4.2.99.18]	gi|970056956|ref|XP_015055122.1|//PREDICTED: zinc finger protein GIS-like [Solanum pennellii]
Solyc01g091030.3.1	480	104.515321523935	259.815110485321	1.31377088728723	0.0255839266763397	Up	0.00858455747504137	NA	NA	NA	K14488//SAUR family protein	gi|460367874|ref|XP_004229795.1|//PREDICTED: auxin-induced protein 10A5 [Solanum lycopersicum]
Solyc01g096940.3.1	4168	258.990353503699	29.9377923405295	-3.11285861965397	0.000122911109624941	Down	2.19359770718733e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460368426|ref|XP_004230068.1|//PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 [Solanum lycopersicum]
Solyc03g095250.3.1	5816	677.181743254261	310.784131386733	-1.12363023712627	0.037370850648826	Down	0.0132806653528368	NA	NA	NA	K02184//formin 2	gi|723683285|ref|XP_010318218.1|//PREDICTED: uncharacterized protein LOC101251662 isoform X2 [Solanum lycopersicum];gi|723683275|ref|XP_010318215.1|//PREDICTED: uncharacterized protein LOC101251662 isoform X1 [Solanum lycopersicum]
Solyc06g068780.3.1	1580	634.229862069403	1282.29219441789	1.0156473326586	0.00168424441484501	Up	0.000394379879754597	NA	NA	NA	NA	gi|460392123|ref|XP_004241667.1|//PREDICTED: protein kish [Solanum lycopersicum]
Solyc09g007710.3.1	4097	100.485149867231	14.810469708693	-2.76229300838848	0.0270668640102666	Down	0.00915277286048675	NA	NA	NA	K03283//heat shock 70kDa protein 1/8	gi|723729138|ref|XP_004246918.2|//PREDICTED: TMV resistance protein N-like [Solanum lycopersicum]
Solyc00g024150.3.1	996	20219.316689983	2309.5461490258	-3.13005296299693	2.11178092935887e-42	Down	5.39659766342122e-45	NA	NA	NA	K01724//4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]	gi|460415966|ref|XP_004253324.1|//PREDICTED: uncharacterized protein LOC101265812 [Solanum lycopersicum]
Solyc04g011700.2.1	1720	307.683975703019	153.090532621007	-1.00706424264804	0.00414750463998496	Down	0.00108410720473241	NA	NA	NA	K15032//mTERF domain-containing protein, mitochondrial	gi|723689311|ref|XP_010319249.1|//PREDICTED: uncharacterized protein LOC101255083 [Solanum lycopersicum]
Solyc03g079980.2.1	1326	5.31831564336736	87.8577101850536	4.04612759013556	2.83558028357267e-09	Up	2.15406016770579e-10	NA	NA	NA	K17553//protein phosphatase 1 regulatory subunit 11	gi|460378569|ref|XP_004235043.1|//PREDICTED: uncharacterized protein LOC101255968 [Solanum lycopersicum]
Solyc06g053910.3.1	1794	595.891129375124	247.402456991808	-1.26818894318265	0.00254077126892886	Down	0.000624869868510236	NA	NA	NA	NA	gi|460390847|ref|XP_004241036.1|//PREDICTED: uncharacterized protein LOC101256680 [Solanum lycopersicum]
Solyc06g076520.1.1	465	788.455563202609	265.894879713867	-1.5681734522713	0.0184494740650605	Down	0.00585709596735203	GO:0044424//intracellular part	NA	GO:0050896//response to stimulus	K13993//HSP20 family protein	gi|525313285|ref|NP_001266045.1|//17.8 kDa class I heat shock protein-like [Solanum lycopersicum]
Solyc01g103640.3.1	1578	59.2757238679315	304.115766374182	2.35910733147947	1.22139457496906e-06	Up	1.46141217595449e-07	NA	NA	NA	NA	gi|460370989|ref|XP_004231329.1|//PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Solanum lycopersicum]
Solyc04g010055.1.1	1728	260.432764940159	64.7850018505232	-2.00717920120997	9.57282008790398e-05	Down	1.66528818213239e-05	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial	gi|460382107|ref|XP_004236781.1|//PREDICTED: pentatricopeptide repeat-containing protein At3g04760, chloroplastic [Solanum lycopersicum]
Solyc07g056010.3.1	2520	588.204458203524	1441.90767192648	1.29358916498589	0.0054554968834645	Up	0.00147449708893697	NA	NA	NA	K20291//conserved oligomeric Golgi complex subunit 4	gi|460395312|ref|XP_004243228.1|//PREDICTED: conserved oligomeric Golgi complex subunit 4 [Solanum lycopersicum]
Solyc01g010700.3.1	1870	730.845401759747	247.319968422817	-1.56318753369798	1.63550354121675e-07	Down	1.65391423412891e-08	NA	NA	NA	NA	gi|460364993|ref|XP_004228390.1|//PREDICTED: SNF1-related protein kinase regulatory subunit gamma-1-like [Solanum lycopersicum]
Solyc02g091360.1.1	501	145.540054065044	65.47447221731	-1.15241182142424	0.00621952572614605	Down	0.00171135049221998	NA	NA	NA	NA	gi|460372357|ref|XP_004231997.1|//PREDICTED: uncharacterized protein At1g66480 [Solanum lycopersicum]
Solyc05g008580.3.1	3167	396.326015041903	110.976417246641	-1.83643453664525	0.000484737239868869	Down	9.94519158345285e-05	GO:0005634//nucleus;GO:0016021//integral component of membrane;GO:0005789//endoplasmic reticulum membrane	NA	GO:0006658//phosphatidylserine metabolic process;GO:0006659//phosphatidylserine biosynthetic process	K08730//phosphatidylserine synthase 2 [EC:2.7.8.29]	gi|460386380|ref|XP_004238876.1|//PREDICTED: CDP-diacylglycerol--serine O-phosphatidyltransferase 1-like [Solanum lycopersicum]
Solyc02g078860.3.1	1805	890.870313157792	124.510088231204	-2.83895279020604	2.16156866132322e-20	Down	3.81908284429404e-22	NA	NA	NA	K01082//3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]	gi|460374041|ref|XP_004232820.1|//PREDICTED: PAP-specific phosphatase HAL2-like [Solanum lycopersicum]
Solyc03g120900.2.1	998	28.0295480068126	104.296665243542	1.8956726448591	0.00863645586801258	Up	0.00247717041540021	NA	NA	NA	K14004//protein transport protein SEC13	gi|460379806|ref|XP_004235651.1|//PREDICTED: protein transport protein SEC13 homolog B-like [Solanum lycopersicum]
Solyc08g042140.3.1	1372	263.736533026188	99.8011133379784	-1.40196961363812	0.000439063358646063	Down	8.9243048110071e-05	NA	NA	NA	NA	gi|460398826|ref|XP_004244952.1|//PREDICTED: uncharacterized protein LOC101265151 isoform X2 [Solanum lycopersicum]
Solyc11g069450.1.1	522	600.723563274837	143.701273287211	-2.06362840935748	1.16220260575132e-05	Down	1.66870599275163e-06	NA	NA	NA	NA	gi|460411475|ref|XP_004251136.1|//PREDICTED: uncharacterized protein LOC101259309 [Solanum lycopersicum]
Solyc07g054920.2.1	1580	2.87614582210047	53.7323921256551	4.22358333903331	4.89136874727991e-05	Up	7.97846639261103e-06	NA	NA	NA	K05278//flavonol synthase [EC:1.14.11.23];K06892//feruloyl-CoA ortho-hydroxylase [EC:1.14.11.-]	gi|723715030|ref|XP_004243294.2|//PREDICTED: flavonol synthase/flavanone 3-hydroxylase [Solanum lycopersicum]
Solyc01g008230.3.1	794	606.705590068122	50.0942208425918	-3.59828052360939	1.82598593643354e-05	Down	2.73952340619688e-06	NA	NA	GO:2000024//regulation of leaf development	K16221//transcription factor TCP21 (protein CCA1 HIKING EXPEDITION)	gi|970003054|ref|XP_015062295.1|//PREDICTED: transcription factor TCP7 [Solanum pennellii];gi|350539920|ref|NP_001233810.1|//TCP transcription factor 15 [Solanum lycopersicum]
Solyc03g116710.3.1	883	442.535895839808	1704.09966055077	1.94514332313769	9.2962109733704e-09	Up	7.62671848530947e-10	NA	NA	NA	K03239//translation initiation factor eIF-2B subunit alpha	gi|970013795|ref|XP_015067873.1|//PREDICTED: protein LURP-one-related 5 [Solanum pennellii]
Solyc07g005583.1.1	730	16.3351974039762	0.802444968986658	-4.34743762222481	0.00800343024903582	Down	0.00227471878816528	NA	NA	NA	NA	NA
Solyc09g091700.3.1	1044	366.203435994783	58.6120563363151	-2.64337596901692	0.00246332871048677	Down	0.000603358817661772	NA	NA	NA	K07119//uncharacterized protein;K08070//2-alkenal reductase [EC:1.3.1.74]	gi|460404749|ref|XP_004247843.1|//PREDICTED: NADP-dependent alkenal double bond reductase P2-like [Solanum lycopersicum]
Solyc03g113620.3.1	1869	1282.74872740963	521.483087822564	-1.29854622357425	0.0063734929258499	Down	0.00176085916081704	NA	NA	NA	K08869//aarF domain-containing kinase;K17613//calcineurin-binding protein cabin-1	gi|460380839|ref|XP_004236161.1|//PREDICTED: transcription factor MYB1R1-like [Solanum lycopersicum]
Solyc01g087040.2.1	969	3334.89594114424	273.919784572701	-3.60581636831552	2.47036578787659e-07	Down	2.57460218536713e-08	GO:0009523//photosystem II	GO:0046872//metal ion binding	GO:0044237//cellular metabolic process	NA	gi|460367516|ref|XP_004229619.1|//PREDICTED: thylakoid lumenal 19 kDa protein, chloroplastic [Solanum lycopersicum]
Solyc07g064820.1.1	1473	120.4845358939	271.035227578316	1.16963238741867	0.0329851095841539	Up	0.0115007721429169	NA	NA	NA	K20716	gi|460397582|ref|XP_004244346.1|//PREDICTED: mitogen-activated protein kinase kinase kinase 2-like [Solanum lycopersicum]
Solyc01g088620.3.1	1159	64.9344460619221	12.0891315349195	-2.42527338682406	0.0298233417775476	Down	0.0102282901332643	NA	NA	NA	K15082//DNA repair protein RAD7	gi|460367705|ref|XP_004229711.1|//PREDICTED: uncharacterized protein LOC101247064 [Solanum lycopersicum]
Solyc06g054100.2.1	1209	1.68199158570324	9.50151759186896	2.49798747212457	0.0454324667018283	Up	0.0167094881820091	NA	NA	NA	NA	gi|460390867|ref|XP_004241046.1|//PREDICTED: uncharacterized protein LOC101259756 [Solanum lycopersicum]
Solyc12g010410.2.1	1356	17.7258996436336	859.888617690748	5.60021904243425	1.01687487993028e-20	Up	1.7321895785304e-22	GO:0043231//intracellular membrane-bounded organelle	GO:0003677//DNA binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0006351//transcription, DNA-templated	K16670//homeobox protein Meis2;K15613//homeobox protein Meis1	gi|460412775|ref|XP_004251773.1|//PREDICTED: homeobox protein knotted-1-like LET12 isoform X1 [Solanum lycopersicum]
Solyc05g010517.1.1	585	6.93286966283645	43.6588385538768	2.65474920776101	0.00875024369798781	Up	0.00251244871154663	NA	GO:0003677//DNA binding	GO:0006351//transcription, DNA-templated	K09060//plant G-box-binding factor	gi|460386635|ref|XP_004239003.1|//PREDICTED: basic leucine zipper 43 [Solanum lycopersicum]
Solyc08g075825.1.1	2596	27.1956715074805	65.0544618238437	1.25827096014339	0.0163439378047597	Up	0.00509666705213284	NA	GO:0034062//RNA polymerase activity	NA	K11699//RNA-dependent RNA polymerase [EC:2.7.7.48]	gi|723725866|ref|XP_010325614.1|//PREDICTED: LOW QUALITY PROTEIN: RNA-dependent RNA polymerase 6-like [Solanum lycopersicum]
Solyc12g099990.2.1	654	300.493726809476	973.935235249748	1.69649096600671	4.90450317075778e-06	Up	6.55201258535704e-07	NA	GO:0046872//metal ion binding	NA	K02183//calmodulin	gi|923681636|ref|XP_013653706.1|//PREDICTED: calmodulin-like [Brassica napus]
Solyc09g010000.3.1	1599	718.273189369889	2755.18863707229	1.93954652703694	0.00528911366020179	Up	0.00142361300657213	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K06892//feruloyl-CoA ortho-hydroxylase [EC:1.14.11.-];K13229//2,4-dihydroxy-1,4-benzoxazin-3-one-glucoside dioxygenase [EC:1.14.20.2]	gi|460401986|ref|XP_004246496.1|//PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like [Solanum lycopersicum]
Solyc07g005570.3.1	1512	4382.98097215101	693.782414290571	-2.65935723833594	1.02144919764384e-11	Down	5.2580190172437e-13	NA	NA	NA	K00700//1,4-alpha-glucan branching enzyme [EC:2.4.1.18]	gi|460393992|ref|XP_004242590.1|//PREDICTED: APO protein 2, chloroplastic [Solanum lycopersicum]
Solyc12g056220.2.1	1369	4531.81290307817	1455.10045797981	-1.6389695422964	0.0384052637253305	Down	0.0136883529052337	GO:0031224//intrinsic component of membrane	NA	GO:0006810//transport;GO:0050896//response to stimulus	K09872//aquaporin PIP	gi|565324189|ref|NP_001274291.1|//probable aquaporin PIP-type pTOM75-like [Solanum lycopersicum]
Solyc03g065250.3.1	2409	4225.95413411452	1705.43630703412	-1.30913623364535	0.001043541416015	Down	0.000232723583271871	NA	NA	NA	K15404//aldehyde decarbonylase [EC:4.1.99.5]	gi|460378168|ref|XP_004234847.1|//PREDICTED: protein ECERIFERUM 1-like [Solanum lycopersicum];gi|698480399|ref|XP_009787251.1|//PREDICTED: protein ECERIFERUM 1-like isoform X1 [Nicotiana sylvestris]
Solyc04g074310.3.1	1558	353.13637394504	88.4287695066998	-1.99763771102654	0.000711295792054466	Down	0.000152318261717344	NA	NA	NA	K12741//heterogeneous nuclear ribonucleoprotein A1/A3	gi|460384447|ref|XP_004237923.1|//PREDICTED: RNA-binding protein 24-B [Solanum lycopersicum]
Solyc08g081320.3.1	3335	2758.7618480075	5787.21790617542	1.06884904650612	0.00724450703843783	Up	0.00203660623542188	GO:0030119//AP-type membrane coat adaptor complex	GO:0022892//substrate-specific transporter activity	GO:0015031//protein transport	K12392//AP-1 complex subunit beta-1	gi|460400121|ref|XP_004245584.1|//PREDICTED: beta-adaptin-like protein C [Solanum lycopersicum]
Solyc01g006640.1.1	6960	4.67177873503679	0.35920913964183	-3.70107598357024	0.0279083860720715	Down	0.0094695854485637	NA	NA	NA	K00665//fatty acid synthase, animal type [EC:2.3.1.85]	gi|723656530|ref|XP_010317976.1|//PREDICTED: uncharacterized protein LOC104646358 [Solanum lycopersicum]
Solyc08g076100.3.1	2232	928.05908212532	1995.82303609688	1.10469524843101	0.00100346767699367	Up	0.000223075936543546	GO:0043231//intracellular membrane-bounded organelle	GO:0003677//DNA binding;GO:0005515//protein binding;GO:0043565//sequence-specific DNA binding;GO:0003700//transcription factor activity, sequence-specific DNA binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0006355//regulation of transcription, DNA-templated;GO:0006351//transcription, DNA-templated	K09060//plant G-box-binding factor	gi|460400818|ref|XP_004245929.1|//PREDICTED: transcription factor HBP-1a [Solanum lycopersicum]
Solyc02g092990.1.1	1653	451.501204579989	5918.02946283813	3.71231513713586	1.47020894416852e-13	Up	5.79797622979832e-15	NA	NA	NA	K10268//F-box and leucine-rich repeat protein 2/20;K10273//F-box and leucine-rich repeat protein 7	gi|460372116|ref|XP_004231878.1|//PREDICTED: F-box protein SKIP2-like [Solanum lycopersicum]
Solyc08g066420.1.1	510	234.562623083051	90.9117077379291	-1.36743513834576	0.000536596538501249	Down	0.000111367583359734	NA	NA	NA	NA	gi|460399243|ref|XP_004245151.1|//PREDICTED: lachrymatory-factor synthase [Solanum lycopersicum]
Solyc05g054340.3.1	4221	320.152704233504	49.8515016004317	-2.68305132954175	8.21613621914601e-06	Down	1.15426485052786e-06	NA	NA	NA	K13453;K13457//disease resistance protein RPM1	gi|460388296|ref|XP_004239804.1|//PREDICTED: putative late blight resistance protein homolog R1A-3 [Solanum lycopersicum]
Solyc07g043590.3.1	2357	973.757237350763	4878.17060658788	2.3247061640687	3.50370559974313e-08	Up	3.13306610026233e-09	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K17839//polyamine oxidase [EC:1.5.3.17 1.5.3.-]	gi|460396127|ref|XP_004243630.1|//PREDICTED: probable polyamine oxidase 2 [Solanum lycopersicum]
Solyc03g006780.2.1	1853	86.2975848184645	8.36996182473814	-3.36602723595315	6.89684777207234e-06	Down	9.51182971398079e-07	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1];K05349//beta-glucosidase [EC:3.2.1.21]	gi|970015108|ref|XP_015068563.1|//PREDICTED: uncharacterized protein LOC107013090 [Solanum pennellii]
Solyc01g108160.3.1	6871	588.137724811485	1957.8221243196	1.73502375938768	0.000152717188286077	Up	2.79727248858575e-05	NA	NA	NA	K17906//autophagy-related protein 2	gi|723665398|ref|XP_010315233.1|//PREDICTED: uncharacterized protein LOC101260283 [Solanum lycopersicum]
Solyc05g050910.3.1	1640	48.4447420857026	158.839467287079	1.71315743008966	0.00266959960724176	Up	0.000660931884273885	NA	NA	NA	K00485//dimethylaniline monooxygenase (N-oxide forming) [EC:1.14.13.8]	gi|460388802|ref|XP_004240053.1|//PREDICTED: flavin-containing monooxygenase FMO GS-OX5-like [Solanum lycopersicum]
Solyc11g066040.2.1	2610	522.022047470676	1347.73033596528	1.36834921504812	0.000485423097066453	Up	9.96792843946285e-05	NA	NA	NA	K08332//vacuolar protein 8	gi|460411115|ref|XP_004250960.1|//PREDICTED: U-box domain-containing protein 13 [Solanum lycopersicum]
Solyc01g090340.2.1	988	1716.165842868	26.8749146215228	-5.99678499374255	4.09721801200307e-23	Down	5.54379804069298e-25	NA	NA	NA	K09286//EREBP-like factor	gi|460367786|ref|XP_004229751.1|//PREDICTED: ethylene-responsive transcription factor 1-like [Solanum lycopersicum]
Solyc03g116270.3.1	2076	112.614836309093	0.467633865230284	-7.9118017796462	1.51535178249605e-11	Down	8.00377767927875e-13	NA	GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K05933//aminocyclopropanecarboxylate oxidase [EC:1.14.17.4]	gi|460380549|ref|XP_004236018.1|//PREDICTED: flavonol synthase/flavanone 3-hydroxylase [Solanum lycopersicum]
Solyc12g044410.2.1	2523	605.253284647128	209.085217877646	-1.53344793521151	0.00143767632855258	Down	0.000331070685768519	GO:0043231//intracellular membrane-bounded organelle	GO:0003677//DNA binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0006351//transcription, DNA-templated	K09338//homeobox-leucine zipper protein	gi|565387361|ref|XP_006359469.1|//PREDICTED: homeobox-leucine zipper protein ATHB-15-like [Solanum tuberosum];gi|460413983|ref|XP_004252354.1|//PREDICTED: homeobox-leucine zipper protein ATHB-15 [Solanum lycopersicum];gi|970068341|ref|XP_015061298.1|//PREDICTED: homeobox-leucine zipper protein ATHB-15-like [Solanum pennellii]
BGI_novel_G000055	314	44.223988475669	11.6027617141934	-1.93036090529643	0.0212332518300225	Down	0.00690389353337133	NA	NA	NA	K09840//9-cis-epoxycarotenoid dioxygenase [EC:1.13.11.51];K17479//glutaredoxin domain-containing cysteine-rich protein 1;K10398//kinesin family member 11	gi|971540751|ref|XP_015161771.1|//PREDICTED: uncharacterized protein LOC107059589 [Solanum tuberosum]
Solyc07g026720.2.1	3485	169.424236164286	48.7538829316519	-1.79705123730503	6.87880207437724e-05	Down	1.15971454385002e-05	NA	NA	NA	K01537//Ca2+-transporting ATPase [EC:3.6.3.8]	gi|723654251|ref|XP_010315512.1|//PREDICTED: uncharacterized protein LOC104645462 isoform X2 [Solanum lycopersicum];gi|723681814|ref|XP_010317946.1|//PREDICTED: uncharacterized protein LOC104646331 [Solanum lycopersicum]
Solyc08g077740.1.1	3213	36.1344398548118	335.322465308062	3.2141027059965	1.78345175077024e-05	Up	2.67039126391981e-06	NA	NA	NA	K13466//EIX receptor 1/2;K10406//kinesin family member C2/C3;K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|460401312|ref|XP_004246170.1|//PREDICTED: receptor-like protein 12 isoform X1 [Solanum lycopersicum]
Solyc01g098840.3.1	2923	1266.86932011656	5586.88435661618	2.14077624261041	2.62397072948093e-08	Up	2.29508345231452e-09	NA	NA	NA	K00869//mevalonate kinase [EC:2.7.1.36]	gi|460368656|ref|XP_004230181.1|//PREDICTED: mevalonate kinase [Solanum lycopersicum]
Solyc01g094140.3.1	2165	151.740997198555	4.35359195300946	-5.1232609185334	7.15990890137782e-08	Down	6.82150259129332e-09	NA	NA	NA	K20495	gi|970004513|ref|XP_015063055.1|//PREDICTED: cytochrome P450 704C1-like isoform X1 [Solanum pennellii]
Solyc03g059260.3.1	2234	2130.58956967122	877.281460609742	-1.28014101763358	0.0123787970509026	Down	0.00371207030991917	NA	NA	NA	K03797	gi|723681439|ref|XP_010317889.1|//PREDICTED: carboxyl-terminal-processing peptidase 3, chloroplastic [Solanum lycopersicum]
Solyc02g079100.3.1	1709	797.0152473917	370.623790434423	-1.10465183282742	0.028004316397815	Down	0.00951257400228447	NA	GO:0003919//FMN adenylyltransferase activity;GO:0000287//magnesium ion binding;GO:0016787//hydrolase activity;GO:0008531//riboflavin kinase activity	GO:0016310//phosphorylation;GO:0009231//riboflavin biosynthetic process	K20884;K00861//riboflavin kinase [EC:2.7.1.26]	gi|460374001|ref|XP_004232800.1|//PREDICTED: bifunctional riboflavin kinase/FMN phosphatase [Solanum lycopersicum];gi|697155680|ref|XP_009586584.1|//PREDICTED: bifunctional riboflavin kinase/FMN phosphatase-like isoform X1 [Nicotiana tomentosiformis]
Solyc04g007810.1.1	420	26.94089937615	3.80669905510895	-2.82318558864885	0.0120656422249652	Down	0.00360781951426386	NA	NA	NA	NA	gi|723690243|ref|XP_010319390.1|//PREDICTED: periaxin-like [Solanum lycopersicum]
Solyc08g080550.1.1	2599	1254.55353269786	145.055714420084	-3.11249499664728	0.000508295146423367	Down	0.00010481439579072	NA	GO:0017111//nucleoside-triphosphatase activity;GO:0005488//binding	NA	K16911//ATP-dependent RNA helicase DDX21 [EC:3.6.4.13];K12858//ATP-dependent RNA helicase DDX23/PRP28 [EC:3.6.4.13];K14778//ATP-dependent RNA helicase DDX49/DBP8 [EC:3.6.4.13]	gi|460400225|ref|XP_004245636.1|//PREDICTED: DEAD-box ATP-dependent RNA helicase 47, mitochondrial [Solanum lycopersicum]
Solyc03g121290.3.1	2261	711.484991354697	1445.36640591128	1.02253003900234	0.000528204527612744	Up	0.000109330540548441	NA	NA	NA	K05350//beta-glucosidase [EC:3.2.1.21]	gi|460379748|ref|XP_004235623.1|//PREDICTED: putative F-box/LRR-repeat protein At5g02700 [Solanum lycopersicum]
Solyc02g088200.3.1	1945	209.473769251632	2124.92702283141	3.34257179205877	1.40925685403569e-11	Up	7.41319993772914e-13	NA	NA	NA	K18666//activating signal cointegrator complex subunit 1	gi|723671365|ref|XP_010316245.1|//PREDICTED: activating signal cointegrator 1 complex subunit 1-like [Solanum lycopersicum];gi|970006482|ref|XP_015064096.1|//PREDICTED: activating signal cointegrator 1 complex subunit 1-like [Solanum pennellii]
Solyc08g078090.1.1	1659	923.020631011018	365.370077035056	-1.33700440939641	0.000133267217996931	Down	2.40205064994831e-05	NA	NA	NA	K16818//phospholipase A1 [EC:3.1.1.32]	gi|460400581|ref|XP_004245812.1|//PREDICTED: phospholipase A1-Ibeta2, chloroplastic-like [Solanum lycopersicum]
Solyc02g093710.1.1	576	272.229467025306	1640.74828811811	2.59145878533066	7.0997954909683e-05	Up	1.19988343357873e-05	NA	NA	NA	NA	gi|525314192|ref|NP_001266223.1|//Hop-interacting protein THI031 [Solanum lycopersicum]
Solyc07g009150.3.1	2321	2432.70286258746	181.68851315438	-3.74302099962878	2.25149927366932e-28	Down	1.80435494199681e-30	NA	NA	NA	K08869//aarF domain-containing kinase	gi|970041337|ref|XP_015082070.1|//PREDICTED: uncharacterized protein slr0889 [Solanum pennellii];gi|460394509|ref|XP_004242845.1|//PREDICTED: uncharacterized aarF domain-containing protein kinase 1 [Solanum lycopersicum]
Solyc05g025600.1.1	336	8243.53777759241	655.441279760527	-3.65272517202658	6.70847690238626e-08	Down	6.35139828986921e-09	NA	NA	NA	NA	gi|723700162|ref|XP_010321120.1|//PREDICTED: uncharacterized protein LOC101259747 [Solanum lycopersicum]
Solyc10g081920.2.1	3536	1332.22372453795	2800.30361573115	1.0717468770674	0.0477417001514552	Up	0.0177260725812079	GO:0030120//vesicle coat	NA	GO:0015031//protein transport	K17301//coatomer subunit beta	gi|460407939|ref|XP_004249406.1|//PREDICTED: coatomer subunit beta-1 [Solanum lycopersicum]
Solyc12g055840.2.1	1781	1825.93480500073	286.114535413671	-2.67397055726394	0.0107659204275075	Down	0.00317544089544008	NA	GO:0008422//beta-glucosidase activity;GO:0043167//ion binding	GO:0044238//primary metabolic process	K19891//glucan endo-1,3-beta-glucosidase 1/2/3 [EC:3.2.1.39]	gi|460414517|ref|XP_004252615.1|//PREDICTED: glucan endo-1,3-beta-glucosidase 11-like [Solanum lycopersicum]
Solyc03g111340.3.1	1829	369.310707561869	1092.17064886999	1.56429129442641	1.51277698346146e-06	Up	1.83881233899948e-07	GO:0005829//cytosol	GO:0016614//oxidoreductase activity, acting on CH-OH group of donors;GO:0071566//UFM1 activating enzyme activity;GO:0061503//tRNA threonylcarbamoyladenosine dehydratase;GO:0005488//binding	GO:0071569//protein ufmylation;GO:0061504//cyclic threonylcarbamoyladenosine biosynthetic process	K12164//ubiquitin-like modifier-activating enzyme 5	gi|460381174|ref|XP_004236327.1|//PREDICTED: ubiquitin-like modifier-activating enzyme 5 [Solanum lycopersicum]
Solyc10g083970.1.1	1990	6099.52719085138	21706.8036517282	1.83137798272355	9.71502922884327e-13	Up	4.32012444834129e-14	GO:0044424//intracellular part	GO:0016765//transferase activity, transferring alkyl or aryl (other than methyl) groups;GO:0046872//metal ion binding;GO:0032559//adenyl ribonucleotide binding	GO:0044237//cellular metabolic process	K00789//S-adenosylmethionine synthetase [EC:2.5.1.6]	gi|723739250|ref|XP_010312254.1|//PREDICTED: S-adenosylmethionine synthase 3-like [Solanum lycopersicum]
Solyc02g071720.2.1	1423	424.2873401869	100.851925978294	-2.07280299689213	0.0460476294571382	Down	0.0169889457420141	NA	NA	NA	K21026;K17604//zinc finger SWIM domain-containing protein 3;K00679//phospholipid:diacylglycerol acyltransferase [EC:2.3.1.158];K10960//geranylgeranyl reductase [EC:1.3.1.83]	gi|460374399|ref|XP_004232998.1|//PREDICTED: GDSL esterase/lipase At1g29670-like [Solanum lycopersicum]
Solyc01g006450.3.1	1691	1738.62856633599	537.406326887134	-1.69386454253598	0.0213807177550642	Down	0.00695909390372728	NA	GO:0004312//fatty acid synthase activity	GO:0008152//metabolic process	K00208//enoyl-[acyl-carrier protein] reductase I [EC:1.3.1.9 1.3.1.10]	gi|723655785|ref|XP_010315949.1|//PREDICTED: enoyl-[acyl-carrier-protein] reductase [NADH], chloroplastic-like [Solanum lycopersicum]
Solyc10g086690.2.1	1910	67.3211850580529	4514.07484858173	6.06722595733366	3.36138071841217e-46	Up	6.51527498723098e-49	NA	NA	NA	K07456//DNA mismatch repair protein MutS2;K04714//shingomyelin synthase [EC:2.7.8.27]	gi|460408344|ref|XP_004249605.1|//PREDICTED: phosphatidylinositol:ceramide inositolphosphotransferase 1-like [Solanum lycopersicum]
Solyc10g017570.3.1	1450	125.032077767554	877.013495835802	2.81030076873078	0.000202099833961283	Up	3.80801647783766e-05	NA	GO:0003824//catalytic activity	NA	K15095//(+)-neomenthol dehydrogenase [EC:1.1.1.208]	gi|460406247|ref|XP_004248578.1|//PREDICTED: (+)-neomenthol dehydrogenase isoform X1 [Solanum lycopersicum]
Solyc07g009130.3.1	4104	1145.07399558528	521.241463982565	-1.13541707160013	0.0472100523095079	Down	0.0175026349209289	NA	NA	NA	K01534//Cd2+/Zn2+-exporting ATPase [EC:3.6.3.3 3.6.3.5]	gi|460394505|ref|XP_004242843.1|//PREDICTED: cadmium/zinc-transporting ATPase HMA3-like isoform X2 [Solanum lycopersicum]
Solyc04g049224.1.1	2441	39.3430293370594	15.6397366447174	-1.33089182710237	0.0481426678719372	Down	0.0178893043095028	NA	NA	NA	K18213//proteinaceous RNase P [EC:3.1.26.5]	gi|460394692|ref|XP_004242933.1|//PREDICTED: proteinaceous RNase P 1, chloroplastic/mitochondrial-like isoform X1 [Solanum lycopersicum];gi|113205216|gb|AAT39281.2|//Integrase core domain containing protein [Solanum demissum]
Solyc06g060760.3.1	978	76.8956764628103	299.799980970252	1.96302590311885	0.000488869686618318	Up	0.000100478136723327	GO:0043231//intracellular membrane-bounded organelle;GO:0031224//intrinsic component of membrane;GO:0031090//organelle membrane	NA	GO:0006810//transport	K09873//aquaporin TIP	gi|567757473|ref|NP_001274703.1|//TIP protein [Solanum lycopersicum]
Solyc02g022934.1.1	582	66.4346650232439	10.6169180682507	-2.64557118938083	0.000419094297163802	Down	8.47623995978377e-05	NA	NA	NA	NA	gi|723667838|ref|XP_010315634.1|//PREDICTED: uncharacterized protein LOC104645530 isoform X2 [Solanum lycopersicum]
Solyc01g008810.3.1	1312	434.05804709595	1024.02026573279	1.23828437308093	0.000190669245385461	Up	3.57060641425584e-05	NA	NA	NA	K10631//E3 ubiquitin-protein ligase Topors [EC:2.3.2.27]	gi|460365213|ref|XP_004228498.1|//PREDICTED: uncharacterized protein LOC101258982 [Solanum lycopersicum]
Solyc08g066360.3.1	2447	1182.29282617165	561.893619987658	-1.07321847700917	0.0142696477580004	Down	0.00436738026468396	NA	GO:0043169//cation binding;GO:0000166//nucleotide binding;GO:0016615//malate dehydrogenase activity	GO:0043648//dicarboxylic acid metabolic process	K00029//malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]	gi|723722594|ref|XP_010325074.1|//PREDICTED: NADP-dependent malic enzyme-like isoform X1 [Solanum lycopersicum];gi|971581730|ref|XP_015159557.1|//PREDICTED: NADP-dependent malic enzyme-like isoform X1 [Solanum tuberosum]
Solyc12g006630.2.1	942	92.5831844472954	23.3781615047282	-1.98558870720679	0.0115059601769746	Down	0.00341816395595973	NA	NA	NA	K10418//dynein light chain LC8-type	gi|460412360|ref|XP_004251569.1|//PREDICTED: uncharacterized protein LOC101264095 [Solanum lycopersicum]
Solyc05g050720.3.1	1374	459.723615443243	216.967608569343	-1.08328710098242	0.0322072939458291	Down	0.0111863562318188	NA	NA	NA	NA	gi|460388824|ref|XP_004240064.1|//PREDICTED: uncharacterized protein LOC101245062 [Solanum lycopersicum]
Solyc08g076880.3.1	715	2864.60368101376	497.208180638504	-2.5264136168222	1.15247061751284e-11	Down	5.9926066476458e-13	NA	NA	NA	K09874//aquaporin NIP	gi|460400758|ref|XP_004245899.1|//PREDICTED: uncharacterized protein LOC101244894 [Solanum lycopersicum]
Solyc05g005750.3.1	3304	883.434933584508	1806.97906225837	1.03238400259917	0.0212524353750101	Up	0.00691092314788983	NA	NA	NA	K16055//trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12]	gi|460385984|ref|XP_004238680.1|//PREDICTED: probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 9 [Solanum lycopersicum]
Solyc12g056150.2.1	1901	794.217479444534	138.04663745053	-2.5243783655114	1.66202711583474e-24	Down	1.97624366315522e-26	NA	NA	GO:0030654//beta-lactam antibiotic biosynthetic process	K05573//NAD(P)H-quinone oxidoreductase subunit 2 [EC:1.6.5.3]	gi|460414445|ref|XP_004252581.1|//PREDICTED: uncharacterized protein LOC101263293 [Solanum lycopersicum]
Solyc09g091850.3.1	3414	1617.15962971634	621.513918267623	-1.37960348950725	0.00328510195308455	Down	0.000832567296714505	GO:0016020//membrane	GO:0004348//glucosylceramidase activity;GO:0016798//hydrolase activity, acting on glycosyl bonds	GO:0006665//sphingolipid metabolic process;GO:0006680//glucosylceramide catabolic process	K17108//non-lysosomal glucosylceramidase [EC:3.2.1.45]	gi|723732877|ref|XP_010326825.1|//PREDICTED: non-lysosomal glucosylceramidase isoform X1 [Solanum lycopersicum];gi|723732880|ref|XP_010326826.1|//PREDICTED: non-lysosomal glucosylceramidase isoform X2 [Solanum lycopersicum]
Solyc03g097840.3.1	2734	592.752260166549	10748.5422320117	4.18056793903221	2.84104553507048e-16	Up	7.93179926109956e-18	GO:0031224//intrinsic component of membrane	NA	GO:0051234//establishment of localization	K15102//solute carrier family 25 (mitochondrial phosphate transporter), member 3	gi|460379115|ref|XP_004235310.1|//PREDICTED: mitochondrial phosphate carrier protein 3, mitochondrial [Solanum lycopersicum]
Solyc02g078590.1.1	1290	119.339455964597	18.1818143295085	-2.7145030294861	3.00890909509422e-08	Down	2.66145120122953e-09	NA	NA	NA	K01988//lactosylceramide 4-alpha-galactosyltransferase [EC:2.4.1.228]	gi|460374079|ref|XP_004232839.1|//PREDICTED: uncharacterized protein At4g19900 [Solanum lycopersicum]
Solyc03g005190.3.1	1580	1053.11759041261	254.294785032421	-2.05009275445315	4.97126918755381e-06	Down	6.65047156483175e-07	GO:0005840//ribosome	GO:0043169//cation binding;GO:0003735//structural constituent of ribosome;GO:0008097//5S rRNA binding;GO:0051536//iron-sulfur cluster binding	GO:0006091//generation of precursor metabolites and energy;GO:0006412//translation	K02639//ferredoxin;K02881//large subunit ribosomal protein L18	gi|460376452|ref|XP_004234012.1|//PREDICTED: uncharacterized protein LOC101254165 [Solanum lycopersicum];gi|460376454|ref|XP_004234013.1|//PREDICTED: ferredoxin, root R-B2 [Solanum lycopersicum]
Solyc02g085300.3.1	1310	39.6928863751794	645.390802545443	4.02322063742418	5.26561678139388e-09	Up	4.16687953887699e-10	GO:0005622//intracellular	GO:0005215//transporter activity	GO:0006810//transport	K14399//polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78];K19996//phosphatidylinositol transfer protein SFH5;K00133//aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]	gi|460373188|ref|XP_004232403.1|//PREDICTED: random slug protein 5-like [Solanum lycopersicum]
Solyc03g117920.1.1	1074	1.93149756086752	27.8285686658063	3.84877494620169	0.00478545955539316	Up	0.00127217450235068	NA	NA	NA	NA	gi|723686110|ref|XP_010318685.1|//PREDICTED: protein FRIGIDA-like [Solanum lycopersicum]
Solyc01g005990.3.1	834	1310.89238227347	234.409394144355	-2.48344695916207	0.000140942622579796	Down	2.5553336671691e-05	NA	NA	NA	NA	gi|460365667|ref|XP_004228722.1|//PREDICTED: protein YLS3 [Solanum lycopersicum]
Solyc12g036300.2.1	2032	86.9293543703796	198.058013979082	1.18800774310308	0.0124301130677286	Up	0.00373070189433991	NA	NA	NA	K00901//diacylglycerol kinase (ATP) [EC:2.7.1.107];K20283//golgin subfamily A member 4;K10400//kinesin family member 15;K20478//golgin subfamily B member 1	gi|723750276|ref|XP_010314192.1|//PREDICTED: intracellular protein transport protein USO1 isoform X3 [Solanum lycopersicum]
Solyc05g005990.3.1	1805	375.364503057081	163.358300544337	-1.20025246315854	0.0117848790385104	Down	0.00351420278470565	NA	NA	NA	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|723697007|ref|XP_010320609.1|//PREDICTED: protein NRT1/ PTR FAMILY 1.2-like [Solanum lycopersicum]
Solyc12g068070.2.1	2907	552.82056917998	174.448373431814	-1.66401115027322	0.00307088163527337	Down	0.000772871358333301	NA	NA	NA	K10352//myosin heavy chain;K20283//golgin subfamily A member 4;K09291//nucleoprotein TPR;K20478//golgin subfamily B member 1	gi|723749849|ref|XP_010314562.1|//PREDICTED: filament-like plant protein 3 [Solanum lycopersicum]
Solyc02g032930.3.1	4938	457.35523007775	2555.92144547799	2.48245644251735	7.83880075985575e-17	Up	2.04531106750374e-18	GO:0044464//cell part	NA	NA	K14009//B-cell receptor-associated protein 31	gi|460371584|ref|XP_004231615.1|//PREDICTED: B-cell receptor-associated protein 31-like [Solanum lycopersicum]
Solyc01g087150.3.1	2177	75.3775296754502	8.54512439852821	-3.14096111509087	0.00327679279239103	Down	0.000830190868118453	NA	GO:0022857//transmembrane transporter activity	GO:0006810//transport	K03327//multidrug resistance protein, MATE family;K20456//oxysterol-binding protein 1	gi|460367530|ref|XP_004229626.1|//PREDICTED: MATE efflux family protein FRD3 [Solanum lycopersicum]
Solyc05g006310.2.1	745	0.476209208419157	11.560927088703	4.60151776605293	0.00312746672360261	Up	0.000789327463303759	NA	NA	NA	K14664//IAA-amino acid hydrolase [EC:3.5.1.-];K10773//endonuclease III [EC:4.2.99.18]	gi|460386062|ref|XP_004238719.1|//PREDICTED: zinc finger protein 5-like [Solanum lycopersicum]
Solyc03g112310.1.1	1989	395.572738164032	1106.37890715063	1.48383064935118	0.0141796939932279	Up	0.00433667769548364	NA	GO:0000166//nucleotide binding;GO:0004672//protein kinase activity	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460381037|ref|XP_004236259.1|//PREDICTED: L-type lectin-domain containing receptor kinase S.1 [Solanum lycopersicum]
Solyc10g083610.2.1	5106	580.605421133167	2483.09961237065	2.09651219039703	1.29760422029968e-07	Up	1.29141317586109e-08	NA	GO:0004674//protein serine/threonine kinase activity;GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process;GO:0006468//protein phosphorylation	K14510//serine/threonine-protein kinase CTR1 [EC:2.7.11.1]	gi|723737470|ref|XP_010327688.1|//PREDICTED: uncharacterized LOC544127 isoform X2 [Solanum lycopersicum];gi|723737467|ref|XP_010327687.1|//PREDICTED: uncharacterized LOC544127 isoform X1 [Solanum lycopersicum]
Solyc05g053180.3.1	703	18.3272728214271	356.134989683963	4.28036015749536	4.39343411520142e-07	Up	4.79334339316929e-08	NA	NA	NA	NA	gi|698526688|ref|XP_009760182.1|//PREDICTED: uncharacterized protein LOC104212579 [Nicotiana sylvestris]
Solyc01g111320.3.1	2139	546.106928493421	172.58027013342	-1.66191591954238	9.10864222767998e-06	Down	1.28610171307782e-06	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K12173//BRCA1-A complex subunit BRE	gi|460370365|ref|XP_004231023.1|//PREDICTED: thaumatin-like protein 1b [Solanum lycopersicum]
Solyc04g074145.1.1	1988	460.732507475273	1092.15947223349	1.24518222996676	0.00134744714849304	Up	0.000308484433653058	NA	NA	NA	NA	gi|460384421|ref|XP_004237910.1|//PREDICTED: uncharacterized protein LOC101254379 [Solanum lycopersicum];gi|970020243|ref|XP_015071346.1|//PREDICTED: uncharacterized protein LOC107015548 [Solanum pennellii]
Solyc02g083310.3.1	1961	1611.70520411264	667.964414422657	-1.27074473487041	0.00944460987978144	Down	0.00274452730813986	NA	NA	NA	K08999//uncharacterized protein	gi|460373448|ref|XP_004232531.1|//PREDICTED: bifunctional nuclease 2 [Solanum lycopersicum]
Solyc01g097350.3.1	1307	679.840454618957	4729.62255247418	2.798456935254	2.79267149613974e-30	Up	2.02986037627572e-32	NA	NA	NA	K17338//receptor expression-enhancing protein 1/2/3/4	gi|460368488|ref|XP_004230098.1|//PREDICTED: uncharacterized protein LOC101262051 [Solanum lycopersicum]
Solyc04g014830.2.1	2573	189.247834214115	75.7850567205234	-1.3202914785609	0.00191924318735013	Down	0.000456632222486054	NA	NA	NA	K14494//DELLA protein	gi|460381868|ref|XP_004236663.1|//PREDICTED: scarecrow-like protein 21 [Solanum lycopersicum];gi|970021797|ref|XP_015072173.1|//PREDICTED: scarecrow-like protein 21 [Solanum pennellii]
Solyc06g082170.2.1	1435	43.3506184235028	202.660834667937	2.22494282726376	6.76897383238577e-09	Up	5.45242002824871e-10	NA	NA	NA	K17479//glutaredoxin domain-containing cysteine-rich protein 1	gi|970034685|ref|XP_015078668.1|//PREDICTED: uncharacterized protein At5g39865-like [Solanum pennellii]
Solyc12g005630.2.1	1275	27102.2857929164	4654.98697176684	-2.54156549773983	5.77915066784906e-12	Down	2.88009707876629e-13	GO:0031224//intrinsic component of membrane;GO:0009534//chloroplast thylakoid;GO:0034357//photosynthetic membrane	GO:0043169//cation binding;GO:0016679//oxidoreductase activity, acting on diphenols and related substances as donors;GO:0015078//hydrogen ion transmembrane transporter activity;GO:0051536//iron-sulfur cluster binding	GO:0006091//generation of precursor metabolites and energy;GO:0051234//establishment of localization	K02636//cytochrome b6-f complex iron-sulfur subunit [EC:1.10.9.1]	gi|964749655|ref|NP_001304899.1|//cytochrome b6-f complex iron-sulfur subunit, chloroplastic [Solanum lycopersicum]
Solyc07g062300.3.1	2258	845.863871597249	190.335704507017	-2.15187928523497	5.2612881504941e-07	Down	5.81863796873267e-08	NA	NA	NA	K01255//leucyl aminopeptidase [EC:3.4.11.1];K11593//eukaryotic translation initiation factor 2C	gi|460397460|ref|XP_004244285.1|//PREDICTED: uncharacterized protein LOC101246450 [Solanum lycopersicum];gi|970043034|ref|XP_015082917.1|//PREDICTED: uncharacterized protein LOC107026459 [Solanum pennellii]
Solyc08g076290.3.1	1996	15470.4376409747	1562.20022984399	-3.30786272644999	3.17764778898251e-15	Down	9.94939668534854e-17	GO:0044464//cell part	NA	NA	NA	gi|460400824|ref|XP_004245932.1|//PREDICTED: plastidal glycolate/glycerate translocator 1, chloroplastic [Solanum lycopersicum]
Solyc10g084880.3.1	1685	225.19490290008	1113.08565267926	2.30531853459759	0.00424574690677407	Up	0.0011138201405202	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K18081//myotubularin-related protein 1/2 [EC:3.1.3.64 3.1.3.95]	gi|930425307|ref|NP_001234706.2|//uncharacterized protein LOC100134881 [Solanum lycopersicum]
Solyc06g072930.4.1	1235	578.459897067326	250.516176571098	-1.20731317945442	0.000145775530690779	Down	2.65219310161656e-05	NA	NA	NA	K01539//sodium/potassium-transporting ATPase subunit alpha [EC:3.6.3.9]	gi|460391654|ref|XP_004241435.1|//PREDICTED: uncharacterized protein LOC101260146 [Solanum lycopersicum]
Solyc08g080910.3.1	1131	284.791829303068	765.940017546264	1.42732366006089	0.02512521004661	Up	0.00839879542634556	NA	GO:0016740//transferase activity	NA	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|460400181|ref|XP_004245614.1|//PREDICTED: glutathione S-transferase T1 [Solanum lycopersicum]
Solyc12g094720.2.1	1115	1988.74692042049	309.655082570048	-2.68312566528781	4.33486393382804e-20	Down	8.0143600386861e-22	GO:0044425//membrane part	NA	NA	K09264//MADS-box transcription factor, plant;K02717//photosystem II oxygen-evolving enhancer protein 2	gi|460415538|ref|XP_004253115.1|//PREDICTED: psbP domain-containing protein 3, chloroplastic [Solanum lycopersicum]
Solyc04g016070.2.1	615	0.756048086203752	11.9600236788589	3.98359843989179	0.00362624214374154	Up	0.000933999299733639	NA	NA	NA	K09264//MADS-box transcription factor, plant	gi|723690926|ref|XP_010319521.1|//PREDICTED: MADS-box transcription factor 23 [Solanum lycopersicum]
Solyc12g056510.2.1	2367	1828.11876846619	84.869515574306	-4.42896954889487	8.40243690472832e-56	Down	6.89032398628385e-59	NA	NA	NA	NA	gi|723751892|ref|XP_010314480.1|//PREDICTED: trihelix transcription factor GTL1-like [Solanum lycopersicum]
Solyc01g097920.3.1	1368	357.983279133841	1138.99785648995	1.66980092396504	4.91770056180119e-06	Up	6.57330930916172e-07	NA	NA	NA	K01738//cysteine synthase A [EC:2.5.1.47]	gi|565362131|ref|XP_006347804.1|//PREDICTED: cysteine synthase-like [Solanum tuberosum];gi|460368551|ref|XP_004230129.1|//PREDICTED: cysteine synthase [Solanum lycopersicum]
Solyc04g058100.3.1	494	189.640826887481	26.9108019013228	-2.81701230187931	4.74839152132101e-07	Down	5.20538969144367e-08	NA	GO:0043169//cation binding	NA	NA	gi|350537785|ref|NP_001234054.1|//metallothionein-like protein type 2 [Solanum lycopersicum]
BGI_novel_G000124	1425	59.3458840516663	339.588871265792	2.5165693008392	0.00414750463998496	Up	0.00108418257194776	NA	NA	NA	NA	gi|661894751|emb|CDP01750.1|//unnamed protein product [Coffea canephora]
Solyc02g093620.1.1	2229	1567.57715227351	112.961393605435	-3.79463475317724	2.39701262968072e-11	Down	1.31698099603004e-12	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial	gi|460372004|ref|XP_004231824.1|//PREDICTED: pentatricopeptide repeat-containing protein At3g46610 [Solanum lycopersicum]
Solyc10g007000.3.1	2508	185.360878668274	668.561810441912	1.85072415959154	0.00624742243302269	Up	0.00172137120910457	NA	NA	NA	K10581//ubiquitin-conjugating enzyme E2 O [EC:2.3.2.24]	gi|460405603|ref|XP_004248265.1|//PREDICTED: probable ubiquitin-conjugating enzyme E2 25 [Solanum lycopersicum]
Solyc03g045100.1.1	243	8.59203485735963	0.435314869999789	-4.30286863889832	0.00700914317752635	Down	0.00195842169594221	NA	NA	NA	NA	NA
Solyc09g097810.3.1	563	59.3205670794638	3.17409785670457	-4.22411387748461	0.000227643816456737	Down	4.3275065749566e-05	NA	NA	NA	NA	gi|16303746|gb|AAL16783.1|AF313766_1//SAR8.2 protein precursor [Capsicum annuum]
Solyc05g013370.1.1	699	35.9145135102211	241.245433854767	2.74786275784464	0.000146213050749569	Up	2.66178820583307e-05	NA	NA	NA	NA	gi|723700492|ref|XP_010321181.1|//PREDICTED: uncharacterized protein LOC104647464 [Solanum lycopersicum]
Solyc07g043330.2.1	1056	518.142622733414	97.8934098164382	-2.40406561946603	7.29746111073701e-06	Down	1.01160197818812e-06	NA	NA	NA	K14494//DELLA protein	gi|460396153|ref|XP_004243643.1|//PREDICTED: scarecrow-like protein 23 [Solanum lycopersicum]
Solyc07g062810.3.1	1743	88.1904064617379	12.2844752166126	-2.84378549672396	1.61476720966711e-05	Down	2.39554700107167e-06	NA	GO:0008483//transaminase activity	NA	K18482//4-amino-4-deoxychorismate lyase [EC:4.1.3.38]	gi|723718759|ref|XP_010324377.1|//PREDICTED: D-amino-acid transaminase, chloroplastic-like isoform X1 [Solanum lycopersicum];gi|723718762|ref|XP_010324378.1|//PREDICTED: D-amino-acid transaminase, chloroplastic-like isoform X2 [Solanum lycopersicum]
Solyc12g009310.2.1	7420	295.652816907251	71.6860288180533	-2.04414014408435	0.00011592974234015	Down	2.0603586233705e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460413386|ref|XP_004252070.1|//PREDICTED: serine/threonine-protein kinase At5g01020-like [Solanum lycopersicum]
Solyc09g082065.1.1	543	649.443073443882	95.6406587608621	-2.76350710031879	0.000531960832168067	Down	0.000110167525850819	NA	NA	NA	NA	gi|460404182|ref|XP_004247563.1|//PREDICTED: preprotein translocase subunit SECE1 [Solanum lycopersicum]
Solyc03g114040.3.1	7987	46.7465522568438	11.1982439064744	-2.06158745593002	0.0170690657171611	Down	0.00535269307732504	NA	NA	NA	NA	gi|723687403|ref|XP_010318924.1|//PREDICTED: protein PRD1 [Solanum lycopersicum]
Solyc02g082670.3.1	979	540.825413126327	1739.12230039411	1.68512454106308	0.000868934133647699	Up	0.000190480156552189	NA	GO:0003677//DNA binding	GO:0006351//transcription, DNA-templated	K18490//homeobox protein OTX2;K09326	gi|460373525|ref|XP_004232569.1|//PREDICTED: WUSCHEL-related homeobox 8 [Solanum lycopersicum]
Solyc10g007020.1.1	938	426.230594689344	918.165916716702	1.10712072568459	0.00939990403963365	Up	0.00272943389252818	GO:0005758//mitochondrial intermembrane space	GO:0016531//copper chaperone activity	GO:0006825//copper ion transport	K02260//cytochrome c oxidase assembly protein subunit 17	gi|460405599|ref|XP_004248263.1|//PREDICTED: cytochrome c oxidase copper chaperone 1-like [Solanum lycopersicum]
Solyc06g065260.3.1	5983	1190.46450128204	406.077050982498	-1.55169919892921	0.00107004479543439	Down	0.000239511666787816	GO:0016020//membrane	GO:0000166//nucleotide binding;GO:0004672//protein kinase activity	NA	K00924;K08286//protein-serine/threonine kinase [EC:2.7.11.-]	gi|971561242|ref|XP_006353616.2|//PREDICTED: receptor-like protein kinase HAIKU2 [Solanum tuberosum];gi|723709716|ref|XP_010322765.1|//PREDICTED: receptor-like protein kinase HAIKU2 [Solanum lycopersicum]
Solyc12g045020.2.1	1713	22.5578425867185	610.959011922243	4.75937459433038	5.3055435970971e-16	Up	1.52276299752675e-17	NA	NA	NA	K20562	gi|460414039|ref|XP_004252382.1|//PREDICTED: cytochrome P450 CYP736A12 [Solanum lycopersicum]
Solyc05g056450.3.1	1572	29.4541754862907	6.58827759239793	-2.16049891966917	0.0159003611380324	Down	0.00494234052221755	NA	GO:0004175//endopeptidase activity	GO:0019538//protein metabolic process	K00924;K02882//large subunit ribosomal protein L18Ae;K01381//saccharopepsin [EC:3.4.23.25];K19025//AP-5 complex subunit zeta-1	gi|460387956|ref|XP_004239638.1|//PREDICTED: aspartic proteinase nepenthesin-1 [Solanum lycopersicum]
Solyc07g047720.3.1	1843	344.416203544435	1434.80051944621	2.05862524965225	6.16607973829896e-11	Up	3.62453695664882e-12	NA	NA	NA	K08496//golgi SNAP receptor complex member 2	gi|460395983|ref|XP_004243559.1|//PREDICTED: membrin-11 [Solanum lycopersicum]
Solyc07g056420.4.1	1658	6982.2516543048	2128.43827575238	-1.713897102557	0.00457539265268152	Down	0.00121036087878637	NA	GO:0016765//transferase activity, transferring alkyl or aryl (other than methyl) groups	GO:0009755//hormone-mediated signaling pathway	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|926657597|ref|NP_001234157.2|//glutathione S-transferase-like protein [Solanum lycopersicum]
Solyc11g068610.2.1	1525	298.156460343566	1075.29934485198	1.85059683523089	7.23717074929345e-08	Up	6.90050796805302e-09	GO:0043232//intracellular non-membrane-bounded organelle	NA	GO:0008064//regulation of actin polymerization or depolymerization	K05758//actin related protein 2/3 complex, subunit 2	gi|460411338|ref|XP_004251069.1|//PREDICTED: actin-related protein 2/3 complex subunit 2A isoform X1 [Solanum lycopersicum];gi|723745540|ref|XP_010313372.1|//PREDICTED: actin-related protein 2/3 complex subunit 2A isoform X3 [Solanum lycopersicum]
Solyc05g010000.1.1	306	0.753444412236788	31.0515348609002	5.36501969530979	2.91088521521739e-06	Up	3.73680061175216e-07	NA	NA	NA	NA	gi|698481289|ref|XP_009787647.1|//PREDICTED: uncharacterized protein LOC104235557 [Nicotiana sylvestris]
Solyc04g014330.1.1	327	150.661962411217	3.14559632702002	-5.58183787360013	2.79352484562841e-07	Down	2.93742865272019e-08	NA	NA	NA	NA	gi|723690973|ref|XP_010319535.1|//PREDICTED: RNA-binding protein 12-like [Solanum lycopersicum]
Solyc04g080900.3.1	1712	977.194057822262	396.042592188328	-1.30298949829555	2.0251691423056e-07	Down	2.08269034725702e-08	GO:0044464//cell part	GO:0046872//metal ion binding;GO:0032561//guanyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity	GO:0009207//purine ribonucleoside triphosphate catabolic process	K03979//GTPase [EC:3.6.5.-]	gi|723695908|ref|XP_010320407.1|//PREDICTED: glucose-induced degradation protein 8 homolog isoform X2 [Solanum lycopersicum];gi|723695905|ref|XP_010320406.1|//PREDICTED: glucose-induced degradation protein 8 homolog isoform X1 [Solanum lycopersicum];gi|723695911|ref|XP_010320408.1|//PREDICTED: probable GTP-binding protein OBGC2 [Solanum lycopersicum]
Solyc09g015360.3.1	4044	1585.83782512665	626.416324947633	-1.34005152602982	0.000862163441717384	Down	0.00018877098764902	NA	NA	NA	K17285//selenium-binding protein 1;K11000//callose synthase [EC:2.4.1.-]	gi|723726832|ref|XP_010325767.1|//PREDICTED: pentatricopeptide repeat-containing protein At3g24000, mitochondrial-like [Solanum lycopersicum]
Solyc03g117790.2.1	2752	63.7270841898231	23.5113161756209	-1.43855134819428	0.0033203772168674	Down	0.000842594606099346	NA	NA	NA	K08835//serine/threonine-protein kinase OSR1/STK39 [EC:2.7.11.1]	gi|460380262|ref|XP_004235876.1|//PREDICTED: serine/threonine-protein kinase 4 homolog B isoform X2 [Solanum lycopersicum]
Solyc01g079200.3.1	1296	13.6066332608596	2927.09674545802	7.74901648012474	2.35953075005382e-33	Up	1.31045952645751e-35	NA	GO:0016491//oxidoreductase activity	NA	K04125//gibberellin 2-oxidase [EC:1.14.11.13]	gi|902967463|ref|NP_001234747.2|//gibberellin 2-oxidase [Solanum lycopersicum]
Solyc06g074000.1.1	1386	380.424089100123	61.4684380936151	-2.62969087107057	0.000245404032431324	Down	4.7050883945868e-05	NA	NA	NA	K00924;K02882//large subunit ribosomal protein L18Ae;K01381//saccharopepsin [EC:3.4.23.25]	gi|460391471|ref|XP_004241344.1|//PREDICTED: aspartic proteinase nepenthesin-1 [Solanum lycopersicum]
Solyc06g005300.3.1	1073	53.2914893960121	19.2948521509015	-1.46568916515114	0.0348231569077497	Down	0.0122376891056457	NA	NA	NA	NA	gi|460389417|ref|XP_004240350.1|//PREDICTED: uncharacterized protein LOC101250122 [Solanum lycopersicum]
Solyc03g019650.3.1	2312	540.611180947875	231.083799755245	-1.2261752275762	0.000451422785781656	Down	9.19907697132963e-05	NA	NA	NA	K14794//ribosomal RNA-processing protein 12	gi|723684293|ref|XP_010317536.1|//PREDICTED: probable transporter mch1 isoform X3 [Solanum lycopersicum];gi|460377042|ref|XP_004234304.1|//PREDICTED: probable transporter mch1 isoform X1 [Solanum lycopersicum]
Solyc12g036380.1.1	695	166.764291012683	8.55046663694798	-4.28566343307922	7.49290813798002e-07	Down	8.51847689758426e-08	NA	NA	NA	NA	NA
Solyc07g008520.3.1	2349	18.272807753929	3.81696124271177	-2.25920188924309	0.0283101182388715	Down	0.00963333343531601	NA	NA	NA	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|723712962|ref|XP_010323334.1|//PREDICTED: protein NRT1/ PTR FAMILY 8.1 isoform X1 [Solanum lycopersicum]
Solyc06g076100.3.1	2695	383.24005591884	3353.19439603638	3.12921586017003	2.7959592807189e-12	Up	1.32773673909195e-13	NA	NA	NA	K01102//pyruvate dehydrogenase phosphatase [EC:3.1.3.43]	gi|902763166|ref|NP_001266229.2|//Hop-interacting protein THI109 [Solanum lycopersicum]
Solyc10g075160.1.1	435	6560.56884631317	536.148189622172	-3.61311719467385	2.90366418502488e-07	Down	3.07055885377799e-08	GO:0009536//plastid	GO:0043169//cation binding;GO:0051536//iron-sulfur cluster binding	GO:0006091//generation of precursor metabolites and energy;GO:0051234//establishment of localization	K02639//ferredoxin	gi|723737669|ref|XP_004249046.2|//PREDICTED: ferredoxin [Solanum lycopersicum]
Solyc05g005670.1.1	2058	65.3429384726416	164.58784588607	1.33275456342798	0.00159372252823352	Up	0.00037116364829294	NA	NA	NA	K08332//vacuolar protein 8	gi|460387374|ref|XP_004239352.1|//PREDICTED: U-box domain-containing protein 19-like [Solanum lycopersicum]
Solyc03g083770.1.1	603	137.754870740189	1386.66226228524	3.33144120963863	2.8231678642135e-13	Up	1.15965818784974e-14	NA	GO:0030234//enzyme regulator activity	NA	K01051//pectinesterase [EC:3.1.1.11]	gi|460378347|ref|XP_004234934.1|//PREDICTED: 21 kDa protein-like [Solanum lycopersicum]
Solyc01g107780.3.1	1933	582.328579705097	8533.77515655688	3.87327876900195	2.69087474415581e-06	Up	3.43530863229971e-07	NA	GO:0016740//transferase activity	NA	K13496//UDP-glucosyl transferase 73C [EC:2.4.1.-]	gi|460369817|ref|XP_004230753.1|//PREDICTED: scopoletin glucosyltransferase-like [Solanum lycopersicum]
Solyc05g005510.3.1	846	1015.1453097959	2167.67602453556	1.09446289893757	0.000892171213497604	Up	0.000196234344885308	NA	NA	NA	K07466//replication factor A1	gi|460385956|ref|XP_004238666.1|//PREDICTED: uncharacterized protein At4g28440 [Solanum lycopersicum]
Solyc01g111110.3.1	403	73.9981574773887	7.66330529983749	-3.27145066094229	5.44141628657337e-08	Down	5.05645251320538e-09	NA	NA	NA	NA	gi|460370293|ref|XP_004230988.1|//PREDICTED: uncharacterized protein LOC101250258 [Solanum lycopersicum]
Solyc04g081020.3.1	1163	27.5758330635754	99.0469633721642	1.84470827480802	0.0352815004531054	Up	0.012421118673758	NA	NA	NA	K12135//zinc finger protein CONSTANS;K19720//collagen, type III, alpha	gi|460385250|ref|XP_004238317.1|//PREDICTED: B-box zinc finger protein 21 [Solanum lycopersicum]
Solyc03g119280.3.1	1979	1638.32175748679	514.956907107448	-1.66969510816809	6.33694908067662e-07	Down	7.11201535800479e-08	GO:0044424//intracellular part;GO:0005737//cytoplasm	GO:0004821//histidine-tRNA ligase activity;GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0004812//aminoacyl-tRNA ligase activity	GO:0006418//tRNA aminoacylation for protein translation;GO:0006427//histidyl-tRNA aminoacylation	K01892//histidyl-tRNA synthetase [EC:6.1.1.21]	gi|460380034|ref|XP_004235763.1|//PREDICTED: histidine--tRNA ligase, cytoplasmic [Solanum lycopersicum];gi|565349194|ref|XP_006341582.1|//PREDICTED: histidine--tRNA ligase, chloroplastic/mitochondrial isoform X2 [Solanum tuberosum]
Solyc02g080510.1.1	621	854.064773216995	73.9074268916814	-3.53055423767062	1.61486962977644e-10	Down	1.00763819898828e-11	NA	NA	NA	NA	gi|460373824|ref|XP_004232713.1|//PREDICTED: uncharacterized protein LOC101253959 [Solanum lycopersicum]
Solyc06g063330.3.1	3477	988.614997490094	71.9424473436138	-3.78049364949047	1.29304291087108e-16	Down	3.48468027642684e-18	GO:0033176//proton-transporting V-type ATPase complex	GO:0032559//adenyl ribonucleotide binding;GO:0019829//cation-transporting ATPase activity;GO:0015078//hydrogen ion transmembrane transporter activity	GO:0015988//energy coupled proton transmembrane transport, against electrochemical gradient;GO:0015986//ATP synthesis coupled proton transport	K02145//V-type H+-transporting ATPase subunit A [EC:3.6.3.14]	gi|928192543|ref|NP_001234287.2|//vacuolar H+-ATPase A2 subunit isoform [Solanum lycopersicum]
Solyc03g121630.3.1	7099	489.360550537307	1131.40410971139	1.20914460719467	7.59075746233392e-05	Up	1.28823314171784e-05	NA	NA	NA	K17604//zinc finger SWIM domain-containing protein 3	gi|460379692|ref|XP_004235595.1|//PREDICTED: protein FAR1-RELATED SEQUENCE 4 [Solanum lycopersicum]
Solyc02g069390.2.1	1916	80.7463295139304	5.81858886914217	-3.794655464098	8.89132777904027e-08	Down	8.60034128023315e-09	NA	NA	NA	NA	gi|460376212|ref|XP_004233893.1|//PREDICTED: uncharacterized protein LOC101267286 isoform X1 [Solanum lycopersicum]
Solyc05g055240.3.1	3732	331.964386966555	886.881736136637	1.41771325891243	1.74747262369261e-06	Up	2.1514470240259e-07	NA	NA	NA	K01179//endoglucanase [EC:3.2.1.4];K08869//aarF domain-containing kinase;K17613//calcineurin-binding protein cabin-1	gi|6688529|emb|CAB65169.1|//I-box binding factor [Solanum lycopersicum]
Solyc01g090310.2.1	700	18.4821271649893	133.093427168778	2.84823660973869	0.00889715340153591	Up	0.00255852620096769	NA	NA	NA	K09286//EREBP-like factor	gi|723660416|ref|XP_010325364.1|//PREDICTED: ethylene-responsive transcription factor 13-like [Solanum lycopersicum]
Solyc01g008130.3.1	2332	34.777274085109	2355.25165117559	6.08159254959619	1.2321436362695e-48	Up	1.92895604306392e-51	NA	GO:0015036//disulfide oxidoreductase activity	GO:0019725//cellular homeostasis;GO:0007165//signal transduction	K20495	gi|460365294|ref|XP_004228538.1|//PREDICTED: uncharacterized protein LOC101246461 isoform X2 [Solanum lycopersicum];gi|565363638|ref|XP_006348540.1|//PREDICTED: uncharacterized protein LOC102602270 isoform X1 [Solanum tuberosum]
Solyc01g099260.3.1	1410	1485.23412421458	171.577561019085	-3.113757573476	2.82263846654177e-18	Down	6.24961700136354e-20	NA	GO:0005515//protein binding	GO:0044267//cellular protein metabolic process	K03686//molecular chaperone DnaJ;K02704//photosystem II CP47 chlorophyll apoprotein;K08244//alpha-glucan, water dikinase [EC:2.7.9.4]	gi|460368714|ref|XP_004230210.1|//PREDICTED: uncharacterized protein LOC101245500 [Solanum lycopersicum]
Solyc03g005740.2.1	1709	944.469905130614	2547.32354710485	1.43140548248823	1.09084939275068e-08	Up	9.06330437021494e-10	NA	NA	NA	K12946//signal peptidase complex subunit 1 [EC:3.4.-.-]	gi|460376558|ref|XP_004234065.1|//PREDICTED: probable signal peptidase complex subunit 1 [Solanum lycopersicum]
Solyc01g091465.1.1	576	29.7183166467097	185.553584426584	2.64241156670744	8.13688587741088e-07	Up	9.33552062422495e-08	NA	NA	NA	K13448//calcium-binding protein CML	gi|460367928|ref|XP_004229822.1|//PREDICTED: probable calcium-binding protein CML10 [Solanum lycopersicum]
Solyc10g085430.2.1	2020	4670.16520987534	19012.5194723299	2.02540423339009	0.000262114166314078	Up	5.05606385371758e-05	NA	NA	GO:0006952//defense response	K12382//saposin	gi|460408493|ref|XP_004249679.1|//PREDICTED: protein LURP-one-related 10-like [Solanum lycopersicum];gi|565343696|ref|XP_006338964.1|//PREDICTED: cactin [Solanum tuberosum];gi|460408408|ref|XP_004249637.1|//PREDICTED: prosaposin [Solanum lycopersicum]
Solyc05g056570.3.1	7041	574.147838606027	1167.72206722528	1.02420276261059	0.00176077376606372	Up	0.000414793879585608	NA	GO:0046872//metal ion binding;GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process	K13412//calcium-dependent protein kinase [EC:2.7.11.1]	gi|565357862|ref|XP_006345749.1|//PREDICTED: calcium-dependent protein kinase SK5-like [Solanum tuberosum]
Solyc10g077090.2.1	2513	188.534944972253	86.4383915853846	-1.12508781955159	0.00148157575471767	Down	0.000342505323943603	NA	NA	NA	K19034//50S ribosomal protein 5	gi|723737858|ref|XP_010327735.1|//PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Solanum lycopersicum]
Solyc05g008140.3.1	1146	165.944248160401	681.642852271923	2.03831741048905	0.000632764776711838	Up	0.000133944802704135	NA	NA	NA	NA	gi|460386312|ref|XP_004238843.1|//PREDICTED: uncharacterized protein LOC101254383 [Solanum lycopersicum]
Solyc01g005040.3.1	1016	51.5466763084898	396.04422261822	2.94171021999729	0.000262329289098628	Up	5.06314693213321e-05	NA	NA	NA	NA	gi|460366125|ref|XP_004228943.1|//PREDICTED: CASP-like protein PIMP1 [Solanum lycopersicum]
Solyc01g109420.3.1	1701	71.1519205958894	250.457549453383	1.81559149400091	0.0110501817074022	Up	0.00327061366689115	NA	NA	NA	K03809//NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]	gi|460370222|ref|XP_004230953.1|//PREDICTED: minor allergen Alt a 7-like [Solanum lycopersicum]
Solyc02g079533.1.1	2484	17.984118107032	856.189530682838	5.57313487423051	3.39417739137766e-14	Up	1.23732871953457e-15	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723678220|ref|XP_010317325.1|//PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101264400 [Solanum lycopersicum]
Solyc04g080870.1.1	261	498.484321302613	70.277886935957	-2.82640540941313	1.05567610944096e-14	Down	3.54426965479199e-16	NA	GO:0042623//ATPase activity, coupled	GO:0019538//protein metabolic process	NA	gi|460385226|ref|XP_004238305.1|//PREDICTED: LON peptidase N-terminal domain and RING finger protein 1-like [Solanum lycopersicum]
Solyc02g090670.3.1	1824	3918.80354920043	1925.83584007735	-1.02492852017506	0.000128160481946064	Down	2.30018160343783e-05	NA	GO:0043169//cation binding;GO:0008238//exopeptidase activity;GO:0008237//metallopeptidase activity	GO:0019538//protein metabolic process	K01265//methionyl aminopeptidase [EC:3.4.11.18]	gi|460372447|ref|XP_004232042.1|//PREDICTED: methionine aminopeptidase 1D, chloroplastic/mitochondrial [Solanum lycopersicum]
Solyc07g062605.1.1	2403	81.9126285166147	11.7755664843021	-2.79828942524436	0.00694608082576652	Down	0.00193873017829654	NA	NA	NA	NA	gi|460397418|ref|XP_004244264.1|//PREDICTED: uncharacterized protein LOC101265659 isoform X1 [Solanum lycopersicum]
Solyc06g060110.3.1	1923	2641.29265093707	10022.2516164175	1.92389059957346	0.00109400152949703	Up	0.000245404100362052	GO:0031224//intrinsic component of membrane;GO:0016021//integral component of membrane;GO:0005886//plasma membrane	GO:0015171//amino acid transmembrane transporter activity	GO:0003333//amino acid transmembrane transport	K14209//solute carrier family 36 (proton-coupled amino acid transporter)	gi|747047078|ref|XP_011102300.1|//PREDICTED: amino acid permease 3 isoform X1 [Sesamum indicum];gi|936976433|ref|NP_001234606.2|//amino acid transporter [Solanum lycopersicum]
Solyc07g066020.2.1	1624	306.241267173856	151.878454659006	-1.01175147963971	0.0129607602783963	Down	0.00391557186731779	GO:0016020//membrane	NA	NA	K14209//solute carrier family 36 (proton-coupled amino acid transporter)	gi|460396908|ref|XP_004244012.1|//PREDICTED: probable amino acid permease 7 isoform X1 [Solanum lycopersicum]
Solyc08g005440.3.1	3604	306.032498387998	52.9855924862119	-2.53001283517399	6.74901297553625e-05	Down	1.13682680917132e-05	NA	NA	NA	K13457//disease resistance protein RPM1	gi|460397731|ref|XP_004244420.1|//PREDICTED: disease resistance protein RPM1-like [Solanum lycopersicum]
Solyc02g083725.1.1	1063	5.42485594420594	0.388792682702236	-3.8025118556561	0.0229705160253624	Down	0.00756550915461838	NA	NA	NA	K08472//mlo protein	gi|970006395|ref|XP_015064051.1|//PREDICTED: MLO-like protein 4 isoform X2 [Solanum pennellii]
Solyc07g026930.2.1	1793	8.44367767166603	0.744107329555288	-3.50428887155565	0.0159275183520733	Down	0.00495196923269135	NA	NA	NA	NA	gi|460394792|ref|XP_004242975.1|//PREDICTED: hippocampus abundant transcript-like protein 1 [Solanum lycopersicum]
Solyc07g047800.3.1	1329	2745.66555229637	31371.7933093922	3.51424019290781	3.99993488830392e-13	Up	1.67732471646858e-14	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K02934//large subunit ribosomal protein L6e;K10256//omega-6 fatty acid desaturase / acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.6 1.14.19.22];K13237//peroxisomal 2,4-dienoyl-CoA reductase [EC:1.3.1.34]	gi|460395975|ref|XP_004243555.1|//PREDICTED: short-chain dehydrogenase reductase 3a [Solanum lycopersicum]
Solyc09g013110.3.1	2908	334.970424019269	740.725914749729	1.14490609221638	0.00144638108334733	Up	0.000333398711026535	NA	NA	NA	K15685//E3 ubiquitin-protein ligase Hakai [EC:2.3.2.27]	gi|723727082|ref|XP_010325805.1|//PREDICTED: E3 ubiquitin-protein ligase ZNF645 isoform X1 [Solanum lycopersicum]
Solyc06g084510.3.1	1092	827.556604431021	351.872835250619	-1.23380385322059	0.000151204016470639	Down	2.76377959178404e-05	NA	GO:0046914//transition metal ion binding	NA	K10144//RING finger and CHY zinc finger domain-containing protein 1 [EC:2.3.2.27]	gi|723711092|ref|XP_010323027.1|//PREDICTED: RING finger and CHY zinc finger domain-containing protein 1 [Solanum lycopersicum]
Solyc04g080860.1.1	186	96.5451542226947	12.4092270795553	-2.95979059085717	0.000100119843767804	Down	1.74579032781344e-05	NA	GO:0042623//ATPase activity, coupled	GO:0019538//protein metabolic process	NA	gi|698558454|ref|XP_009771292.1|//PREDICTED: uncharacterized protein LOC104221853 [Nicotiana sylvestris]
Solyc02g068760.3.1	2256	1784.56637243616	243.391992838842	-2.87421994792179	5.21594065582265e-08	Down	4.82403323947249e-09	NA	NA	NA	K17710//pentatricopeptide repeat domain-containing protein 1	gi|565398973|ref|XP_006365038.1|//PREDICTED: pentatricopeptide repeat-containing protein At2g35130 isoform X2 [Solanum tuberosum];gi|460374886|ref|XP_004233239.1|//PREDICTED: pentatricopeptide repeat-containing protein At2g35130 [Solanum lycopersicum]
Solyc02g094150.3.1	1556	1494.150834192	201.56264810259	-2.89002557463179	9.23818937490237e-08	Down	8.95651206356085e-09	NA	NA	NA	K19612//2',5'-phosphodiesterase [EC:3.1.13.4 3.1.4.-]	gi|460371908|ref|XP_004231776.1|//PREDICTED: uncharacterized protein LOC101267463 isoform X1 [Solanum lycopersicum]
Solyc03g034190.3.1	814	1148.0627332626	289.690570210063	-1.98661684797927	2.55194916698547e-07	Down	2.665335308593e-08	NA	NA	NA	K19032//30S ribosomal protein 3	gi|460377574|ref|XP_004234566.1|//PREDICTED: 30S ribosomal protein 3, chloroplastic-like [Solanum lycopersicum]
Solyc08g005000.3.1	2066	362.704400611738	121.138952800813	-1.58213140429319	0.036545569232058	Down	0.012938341157227	NA	GO:0008422//beta-glucosidase activity;GO:0043167//ion binding	GO:0044238//primary metabolic process	K19891//glucan endo-1,3-beta-glucosidase 1/2/3 [EC:3.2.1.39]	gi|460397664|ref|XP_004244387.1|//PREDICTED: glucan endo-1,3-beta-glucosidase 2-like isoform X2 [Solanum lycopersicum];gi|697161803|ref|XP_009589694.1|//PREDICTED: glucan endo-1,3-beta-glucosidase 2-like [Nicotiana tomentosiformis]
Solyc08g007500.3.1	1364	14.5197033566233	36.8308271249039	1.34290181799722	0.0364201781589148	Up	0.0128814161633924	NA	NA	NA	NA	gi|723720000|ref|XP_010324602.1|//PREDICTED: uncharacterized protein At4g22758-like [Solanum lycopersicum]
Solyc06g065380.3.1	1789	203.972477116559	6.29743720642678	-5.017465854558	2.04348618307253e-18	Down	4.45593938086115e-20	NA	NA	NA	K13412//calcium-dependent protein kinase [EC:2.7.11.1]	gi|460392443|ref|XP_004241825.1|//PREDICTED: calcium-dependent protein kinase 11 [Solanum lycopersicum]
Solyc04g083010.3.1	2973	4485.22451887807	601.432300047994	-2.8987059492339	7.52352782759068e-11	Down	4.4589269590984e-12	NA	GO:0032559//adenyl ribonucleotide binding;GO:0016301//kinase activity	GO:0006464//cellular protein modification process	K08869//aarF domain-containing kinase	gi|460385573|ref|XP_004238478.1|//PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic [Solanum lycopersicum];gi|565350506|ref|XP_006342209.1|//PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic [Solanum tuberosum]
Solyc02g011800.1.1	414	10.2249657825071	1.20106587857299	-3.08970882496521	0.0321757172004798	Down	0.01117179087977	GO:0016020//membrane;GO:0009536//plastid	NA	NA	K05572//NAD(P)H-quinone oxidoreductase subunit 1 [EC:1.6.5.3]	gi|81301633|ref|YP_398928.1|//NADH dehydrogenase subunit 1 [Nicotiana tomentosiformis]
Solyc06g068240.3.1	2672	295.678054621605	67.7275597022906	-2.12621224992471	0.00998531379130764	Down	0.00291914477654785	GO:0016021//integral component of membrane	GO:0046872//metal ion binding;GO:0015405//P-P-bond-hydrolysis-driven transmembrane transporter activity;GO:0016462//pyrophosphatase activity	GO:0006818//hydrogen transport	K01507//inorganic pyrophosphatase [EC:3.6.1.1]	gi|460392170|ref|XP_004241690.1|//PREDICTED: pyrophosphate-energized vacuolar membrane proton pump-like [Solanum lycopersicum]
Solyc10g085850.1.1	177	260.291567548969	12.6330573584034	-4.36485283790136	7.03691991722589e-05	Down	1.18873270705486e-05	NA	NA	NA	NA	gi|1009718|gb|AAA91132.1|//TPSI1 [Solanum lycopersicum]
Solyc04g015450.3.1	3286	6322.63733735465	2214.81944092367	-1.51333737925439	1.91395909143098e-07	Down	1.95904713920883e-08	GO:0016020//membrane;GO:0009536//plastid;GO:0009507//chloroplast	GO:0008135//translation factor activity, RNA binding;GO:0032561//guanyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity;GO:0005525//GTP binding;GO:0043021//ribonucleoprotein complex binding;GO:0003924//GTPase activity	GO:0006412//translation;GO:0045727//positive regulation of translation;GO:0009207//purine ribonucleoside triphosphate catabolic process	K03596//GTP-binding protein LepA	gi|460381799|ref|XP_004236629.1|//PREDICTED: translation factor GUF1 homolog, chloroplastic [Solanum lycopersicum];gi|698511430|ref|XP_009800810.1|//PREDICTED: translation factor GUF1 homolog, chloroplastic [Nicotiana sylvestris];gi|971555402|ref|XP_015165419.1|//PREDICTED: translation factor GUF1 homolog, chloroplastic isoform X2 [Solanum tuberosum]
Solyc08g075970.3.1	1538	361.178873936047	2799.54486862511	2.95440688815043	1.12862491816528e-16	Up	3.00792759985156e-18	GO:0031224//intrinsic component of membrane;GO:0016021//integral component of membrane	NA	NA	K03695//ATP-dependent Clp protease ATP-binding subunit ClpB	gi|460400898|ref|XP_004245968.1|//PREDICTED: transmembrane protein 45B-like [Solanum lycopersicum]
Solyc09g089930.2.1	684	568.910090707643	1937.65110050372	1.76803624264691	0.00265816919800714	Up	0.00065770564844086	NA	NA	GO:0006351//transcription, DNA-templated	K14516//ethylene-responsive transcription factor 1	gi|350539884|ref|NP_001234818.1|//ethylene responsive element binding protein [Solanum lycopersicum]
Solyc03g078500.3.1	1886	27.9002918716145	1.59310075883914	-4.13037079352004	0.00939610204962991	Down	0.00272797968035513	NA	NA	NA	K13691//pathogen-inducible salicylic acid glucosyltransferase [EC:2.4.1.-];K13030//cyanohydrin beta-glucosyltransferase [EC:2.4.1.85]	gi|460378615|ref|XP_004235064.1|//PREDICTED: 7-deoxyloganetin glucosyltransferase-like [Solanum lycopersicum]
Solyc10g079620.2.1	2243	2385.86746876025	81.2327499329457	-4.87630861149657	1.09994465832194e-17	Down	2.60759207802578e-19	NA	NA	NA	K01082//3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7];K01097//N-acylneuraminate-9-phosphatase [EC:3.1.3.29]	gi|460407564|ref|XP_004249222.1|//PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein 3 [Solanum lycopersicum]
Solyc01g008493.1.1	1534	203.277551045837	59.9004395953034	-1.76281240420143	0.00113702171666969	Down	0.000255859553583379	NA	NA	NA	K08064//nuclear transcription factor Y, alpha	gi|460365249|ref|XP_004228516.1|//PREDICTED: nuclear transcription factor Y subunit A-1 [Solanum lycopersicum]
Solyc02g071110.3.1	1459	572.162565275851	102.197464460699	-2.48506570676342	3.90525132846785e-08	Down	3.53434852598775e-09	NA	NA	NA	NA	gi|460374574|ref|XP_004233085.1|//PREDICTED: probable purine permease 10 [Solanum lycopersicum]
Solyc10g005120.2.1	3226	54.184135266599	10.7437872512374	-2.33436786057874	0.0324329785254701	Down	0.0112797905568844	NA	NA	NA	K05278//flavonol synthase [EC:1.14.11.23];K00228//coproporphyrinogen III oxidase [EC:1.3.3.3]	gi|460405898|ref|XP_004248411.1|//PREDICTED: probable 2-oxoglutarate/Fe(II)-dependent dioxygenase [Solanum lycopersicum]
Solyc02g085940.3.1	527	467.516911559013	36.0286560680629	-3.69780180993655	9.68927002385663e-16	Down	2.85679610439488e-17	GO:0009536//plastid;GO:0009507//chloroplast	GO:0016831//carboxy-lyase activity;GO:0004497//monooxygenase activity;GO:0005488//binding;GO:0016491//oxidoreductase activity;GO:0016984//ribulose-bisphosphate carboxylase activity	GO:0015977//carbon fixation;GO:0019253//reductive pentose-phosphate cycle;GO:0009853//photorespiration;GO:0043094//cellular metabolic compound salvage;GO:0055114//oxidation-reduction process	K01602//ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]	gi|822606574|ref|NP_001296139.1|//ribulose bisphosphate carboxylase small chain 3B, chloroplastic [Solanum lycopersicum];gi|970008460|ref|XP_015065089.1|//PREDICTED: ribulose bisphosphate carboxylase small chain 2C, chloroplastic [Solanum pennellii]
BGI_novel_G000264	842	0.448395554083868	12.5713132543286	4.8092195839811	0.00154678206860356	Up	0.000359136182545533	NA	NA	NA	NA	NA
Solyc07g049670.3.1	2199	0.421776565806743	19.8543100468781	5.5568294764647	7.59611817191808e-05	Up	1.28942605318753e-05	NA	GO:0016746//transferase activity, transferring acyl groups	NA	K19861//benzyl alcohol O-benzoyltransferase [EC:2.3.1.196 2.3.1.232]	gi|460395855|ref|XP_004243495.1|//PREDICTED: benzyl alcohol O-benzoyltransferase-like [Solanum lycopersicum]
Solyc02g068910.3.1	3455	955.828819791747	410.857205383439	-1.21811519967595	0.000534711777745125	Down	0.000110862473220983	NA	NA	NA	NA	gi|460374875|ref|XP_004233234.1|//PREDICTED: uncharacterized protein LOC101256056 isoform X1 [Solanum lycopersicum];gi|970010734|ref|XP_015066267.1|//PREDICTED: uncharacterized protein LOC107011326 isoform X2 [Solanum pennellii];gi|723676339|ref|XP_010317019.1|//PREDICTED: uncharacterized protein LOC101256056 isoform X2 [Solanum lycopersicum];gi|723676345|ref|XP_010317021.1|//PREDICTED: uncharacterized protein LOC101256056 isoform X3 [Solanum lycopersicum]
Solyc12g011100.2.1	1403	20.6420204573514	181.438663480789	3.13582582328488	1.96412961406884e-05	Up	2.96727945647123e-06	NA	NA	NA	K00975//glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]	gi|565366671|ref|XP_006350010.1|//PREDICTED: glucose-1-phosphate adenylyltransferase small subunit, chloroplastic/amyloplastic-like [Solanum tuberosum]
Solyc02g081970.3.1	2557	1107.2891591829	4556.12064792784	2.04077393179573	0.00255107178989741	Up	0.000627878598057724	GO:0016021//integral component of membrane	GO:0005509//calcium ion binding	NA	NA	gi|697125255|ref|XP_009616647.1|//PREDICTED: vacuolar-sorting receptor 6-like [Nicotiana tomentosiformis];gi|460373630|ref|XP_004232618.1|//PREDICTED: vacuolar-sorting receptor 6-like [Solanum lycopersicum]
Solyc03g026210.3.1	1394	1725.57508895047	430.525854591389	-2.00290547022796	0.000187123930897187	Down	3.49375193776655e-05	GO:0044424//intracellular part	GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	GO:0009085//lysine biosynthetic process	K16908//chloroplast NAD(P)H dehydrogenase [EC:1.6.99.-]	gi|460377149|ref|XP_004234357.1|//PREDICTED: putative 4-hydroxy-tetrahydrodipicolinate reductase 3, chloroplastic isoform X2 [Solanum lycopersicum]
Solyc04g072775.1.1	2888	534.727858233365	141.405714015479	-1.91896442147136	2.64302739546022e-09	Down	1.9969496535701e-10	NA	GO:0000166//nucleotide binding	GO:0008033//tRNA processing	K03650//tRNA modification GTPase [EC:3.6.-.-]	gi|460384367|ref|XP_004237883.1|//PREDICTED: probable tRNA modification GTPase MnmE isoform X1 [Solanum lycopersicum]
Solyc09g011390.3.1	2535	13.8552795311696	406.750222008478	4.87563541064362	1.53404462374232e-06	Up	1.86888096099385e-07	NA	NA	NA	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460401781|ref|XP_004246394.1|//PREDICTED: protein NRT1/ PTR FAMILY 5.6-like [Solanum lycopersicum]
Solyc11g040060.2.1	3822	133.589633940343	39.5380946108785	-1.75649281175879	0.00490647665707248	Down	0.00130873516318811	NA	NA	NA	K03452//magnesium/proton exchanger;K10683//BRCA1-associated RING domain protein 1;K11000//callose synthase [EC:2.4.1.-]	gi|697165983|ref|XP_009591801.1|//PREDICTED: pentatricopeptide repeat-containing protein At4g33990-like, partial [Nicotiana tomentosiformis];gi|723743761|ref|XP_010313040.1|//PREDICTED: pentatricopeptide repeat-containing protein At4g33990-like [Solanum lycopersicum]
Solyc04g078600.3.1	6724	382.117149667015	181.423781925101	-1.0746514243915	5.75701292615693e-05	Down	9.55353419831916e-06	NA	NA	NA	K10395//kinesin family member 4/21/27	gi|460384875|ref|XP_004238132.1|//PREDICTED: uncharacterized protein LOC101247613 [Solanum lycopersicum]
Solyc07g053140.3.1	1210	665.279038184606	290.730650646284	-1.1942764001193	0.0429398648128037	Down	0.0156374861794055	NA	NA	NA	K12135//zinc finger protein CONSTANS	gi|460395710|ref|XP_004243424.1|//PREDICTED: zinc finger protein CONSTANS-LIKE 4-like [Solanum lycopersicum]
Solyc05g052210.3.1	1590	169.029838020701	1511.00481267696	3.1601584095282	6.04346579298855e-09	Up	4.84099000638601e-10	NA	NA	NA	NA	gi|460388635|ref|XP_004239972.1|//PREDICTED: uncharacterized protein LOC101266516 isoform X1 [Solanum lycopersicum]
Solyc04g074990.3.1	1401	574.949574090854	245.969176895356	-1.22495789151714	0.0317281364723614	Down	0.0109986457877203	NA	NA	NA	NA	gi|460384545|ref|XP_004237971.1|//PREDICTED: zinc-finger homeodomain protein 2 [Solanum lycopersicum]
Solyc01g109690.1.1	673	430.484570745764	109.057388760948	-1.98087401255113	0.00277351774752718	Down	0.00068924417857327	NA	NA	NA	NA	gi|460370277|ref|XP_004230980.1|//PREDICTED: protein RADIALIS-like 4 [Solanum lycopersicum]
Solyc04g054950.3.1	1040	11.4641354215253	2100.3846249796	7.51738217309576	1.2226248126815e-36	Up	5.377580434487e-39	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K08081//tropinone reductase I [EC:1.1.1.206]	gi|460383383|ref|XP_004237405.1|//PREDICTED: tropinone reductase homolog [Solanum lycopersicum]
Solyc12g010380.2.1	2547	1429.36517830777	500.519574776932	-1.51387614987109	6.42455104920097e-05	Down	1.07858125561358e-05	NA	NA	NA	K00939//adenylate kinase [EC:2.7.4.3]	gi|460412769|ref|XP_004251770.1|//PREDICTED: adenylate kinase 5, chloroplastic isoform X1 [Solanum lycopersicum]
Solyc02g082155.1.1	4413	76.9944644204674	156.634192417323	1.02457254880204	0.00400660153312512	Up	0.00104316802254655	NA	GO:0008270//zinc ion binding	NA	K03452//magnesium/proton exchanger;K11000//callose synthase [EC:2.4.1.-]	gi|723673382|ref|XP_010316500.1|//PREDICTED: pentatricopeptide repeat-containing protein At1g11290-like [Solanum lycopersicum]
Solyc06g008100.3.1	663	15.3728783726252	68.130832898636	2.14792052749817	0.000152734392080434	Up	2.79815691469856e-05	NA	NA	NA	K06995//uncharacterized protein	gi|460389668|ref|XP_004240472.1|//PREDICTED: uncharacterized protein LOC101261523 [Solanum lycopersicum]
Solyc05g054460.3.1	1659	252.049482367786	566.287977671888	1.16782891014953	0.00169158249512411	Up	0.000396287311087484	GO:0016021//integral component of membrane;GO:0005789//endoplasmic reticulum membrane	GO:0004582//dolichyl-phosphate beta-D-mannosyltransferase activity;GO:0035251//UDP-glucosyltransferase activity;GO:0004169//dolichyl-phosphate-mannose-protein mannosyltransferase activity	GO:0006506//GPI anchor biosynthetic process;GO:0035269//protein O-linked mannosylation;GO:0019348//dolichol metabolic process;GO:0006487//protein N-linked glycosylation	K00729//dolichyl-phosphate beta-glucosyltransferase [EC:2.4.1.117]	gi|460388270|ref|XP_004239791.1|//PREDICTED: dolichyl-phosphate beta-glucosyltransferase [Solanum lycopersicum]
Solyc09g097930.3.1	1831	218.98841423924	29.8407945705479	-2.8754966890429	0.000568883920475498	Down	0.00011895925129967	NA	NA	NA	K16904//dCTP diphosphatase [EC:3.6.1.12]	gi|460405105|ref|XP_004248017.1|//PREDICTED: dCTP pyrophosphatase 1-like [Solanum lycopersicum]
Solyc01g080840.3.1	5046	6403.86426754766	2218.30671973218	-1.52948387254935	2.02755291582941e-05	Down	3.07821046152273e-06	GO:0044464//cell part	GO:0032559//adenyl ribonucleotide binding	GO:0006886//intracellular protein transport	K03070//preprotein translocase subunit SecA	gi|723659093|ref|XP_010323109.1|//PREDICTED: protein translocase subunit SECA1, chloroplastic [Solanum lycopersicum]
Solyc05g052590.1.1	2385	363.532072147371	166.603132896455	-1.12566711948038	0.0318410323710908	Down	0.0110413420362404	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460389159|ref|XP_004240226.1|//PREDICTED: putative serine/threonine-protein kinase-like protein CCR3 [Solanum lycopersicum]
Solyc09g014710.3.1	3901	85.0785853598193	583.367475184595	2.77753700282248	0.0024693961455292	Up	0.0006051990329825	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460401629|ref|XP_004246320.1|//PREDICTED: wall-associated receptor kinase 2-like [Solanum lycopersicum]
Solyc00g007150.3.1	488	41.6265069614525	14.8179902720153	-1.49015270983659	0.0397797147591003	Down	0.0142829397454461	NA	NA	NA	NA	NA
Solyc03g115900.3.1	1889	65723.6033740341	1723.03841182873	-5.25338481076647	8.57758456902696e-15	Down	2.83915875104217e-16	GO:0009535//chloroplast thylakoid membrane;GO:0016021//integral component of membrane;GO:0009536//plastid;GO:0009522//photosystem I	GO:0046872//metal ion binding;GO:0016168//chlorophyll binding	GO:0009765//photosynthesis, light harvesting;GO:0006091//generation of precursor metabolites and energy;GO:0018298//protein-chromophore linkage	K08910//light-harvesting complex I chlorophyll a/b binding protein 4	gi|460380541|ref|XP_004236014.1|//PREDICTED: chlorophyll a-b binding protein 4, chloroplastic [Solanum lycopersicum]
Solyc07g054760.1.1	252	7.10588371846338	78.3745417202732	3.46329911652407	2.50100864600831e-06	Up	3.16960988386323e-07	NA	NA	NA	NA	gi|460395478|ref|XP_004243310.1|//PREDICTED: uncharacterized protein LOC101254813 [Solanum lycopersicum]
Solyc05g005560.4.1	2322	1476.94965630236	240.330371250787	-2.61952976816864	0.00370880770493527	Down	0.000957753831064245	GO:0030312//external encapsulating structure;GO:0005576//extracellular region	NA	GO:0003006//developmental process involved in reproduction;GO:0045229//external encapsulating structure organization	K06699//proteasome activator subunit 4;K12472//epidermal growth factor receptor substrate 15	gi|350538029|ref|NP_001234835.1|//polygalacturonase-1 non-catalytic subunit beta precursor [Solanum lycopersicum]
Solyc06g082440.1.1	1260	193.817307706051	2567.15559314781	3.72740142615088	6.67207547049088e-08	Up	6.31196046820704e-09	NA	NA	NA	K12761//carbon catabolite-derepressing protein kinase [EC:2.7.11.1]	gi|525313837|ref|NP_001265893.1|//CBL-interacting protein kinase 11 [Solanum lycopersicum]
Solyc03g078080.3.1	1638	1771.27991435122	657.168065442225	-1.43045793788826	5.95954924386932e-05	Down	9.93406300081392e-06	GO:0044424//intracellular part	GO:0009041//uridylate kinase activity	GO:0006520//cellular amino acid metabolic process;GO:0006220//pyrimidine nucleotide metabolic process;GO:0006796//phosphate-containing compound metabolic process	K09903//uridylate kinase [EC:2.7.4.22]	gi|460378643|ref|XP_004235078.1|//PREDICTED: uncharacterized protein LOC101267587 [Solanum lycopersicum]
Solyc07g042550.3.1	2974	1015.91449976339	4660.34222333289	2.19765691155952	0.000104805301485218	Up	1.83921037495306e-05	NA	GO:0016157//sucrose synthase activity;GO:0035251//UDP-glucosyltransferase activity	GO:0005984//disaccharide metabolic process;GO:0005985//sucrose metabolic process	K00695//sucrose synthase [EC:2.4.1.13]	gi|927028793|ref|NP_001300841.1|//sucrose synthase [Solanum lycopersicum];gi|698527242|ref|XP_009760458.1|//PREDICTED: sucrose synthase [Nicotiana sylvestris]
Solyc03g112010.3.1	2167	342.743769007999	2.40747126184676	-7.15346805157977	4.85273917553766e-20	Down	9.08034540822985e-22	NA	NA	NA	K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30];K07408//cytochrome P450, family 1, subfamily A, polypeptide 1 [EC:1.14.14.1]	gi|723688458|ref|XP_004236280.2|//PREDICTED: uncharacterized protein LOC101247804 [Solanum lycopersicum];gi|565355213|ref|XP_006344494.1|//PREDICTED: cytochrome P450 71A3-like [Solanum tuberosum];gi|976911518|gb|KVH98165.1|//cytochrome P450 [Cynara cardunculus var. scolymus]
Solyc00g136260.1.1	411	26.3502720962026	3.99943991381025	-2.71994797681224	0.000576243252481731	Down	0.000120777389619233	NA	GO:0046872//metal ion binding	NA	K19037//E3 ubiquitin-protein ligase ATL23 [EC:2.3.2.27]	gi|723754667|ref|XP_010315023.1|//PREDICTED: E3 ubiquitin-protein ligase ATL23-like [Solanum lycopersicum]
Solyc11g073270.1.1	2676	56.3451901072584	1.05739032140961	-5.73571252874867	0.000119865476924049	Down	2.13477429828204e-05	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial	gi|460412135|ref|XP_004251458.1|//PREDICTED: putative pentatricopeptide repeat-containing protein At5g59900 isoform X1 [Solanum lycopersicum]
Solyc05g018340.3.1	1706	1667.95595914254	3502.60463792286	1.0703469545922	0.000171648946138758	Up	3.18562734018516e-05	NA	NA	NA	K14651//transcription initiation factor TFIID subunit 15;K13098//RNA-binding protein FUS;K13209//RNA-binding protein EWS	gi|971534433|ref|XP_015160193.1|//PREDICTED: RNA-binding protein EWS isoform X1 [Solanum tuberosum];gi|723699722|ref|XP_010321062.1|//PREDICTED: RNA-binding protein EWS isoform X2 [Solanum lycopersicum];gi|971534435|ref|XP_015160217.1|//PREDICTED: RNA-binding protein EWS isoform X2 [Solanum tuberosum]
Solyc06g051790.3.1	1990	1291.99789905033	4046.64851812797	1.64712382149772	3.74613108667116e-10	Up	2.48690154516227e-11	NA	NA	NA	K18060//poly(A) RNA polymerase, mitochondrial [EC:2.7.7.19];K13291//terminal uridylyltransferase [EC:2.7.7.52]	gi|460390664|ref|XP_004240948.1|//PREDICTED: poly(A) RNA polymerase GLD2 [Solanum lycopersicum]
Solyc03g093430.3.1	3297	324.060043396743	902.879977248049	1.47827307101669	0.000761501367860784	Up	0.000164406545457551	NA	NA	NA	K20642;K18470//Rho GTPase-activating protein 1	gi|460378842|ref|XP_004235177.1|//PREDICTED: uncharacterized Rho GTPase-activating protein At5g61530 [Solanum lycopersicum]
Solyc07g065530.1.1	591	530.255045256486	142.442256679486	-1.89630924546115	0.0216958497046891	Down	0.00707694873884502	NA	NA	NA	NA	gi|460397023|ref|XP_004244068.1|//PREDICTED: flocculation protein FLO11-like [Solanum lycopersicum]
Solyc05g006170.3.1	3161	1883.03027422497	482.189068524374	-1.96538534513837	3.76671752795063e-06	Down	4.92251068025753e-07	NA	NA	NA	K10901//bloom syndrome protein [EC:3.6.4.12];K14319//Ran GTPase-activating protein 1	gi|970030885|ref|XP_015076727.1|//PREDICTED: protein NLRC3 [Solanum pennellii];gi|460386050|ref|XP_004238713.1|//PREDICTED: protein NLRC3 [Solanum lycopersicum]
Solyc02g080040.3.1	1797	165.980310298285	901.674248562015	2.44159420991337	0.0022032813717896	Up	0.000531520688766301	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|970005903|ref|XP_015063796.1|//PREDICTED: putative receptor-like protein kinase At4g00960 [Solanum pennellii]
Solyc04g071620.3.1	1143	2833.63102180301	21299.138901039	2.91007128855326	1.28941655462485e-09	Up	9.28083855293197e-11	NA	NA	GO:0006950//response to stress	K12741//heterogeneous nuclear ribonucleoprotein A1/A3;K01640//hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4];K12813//pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:3.6.4.13]	gi|536291024|ref|NP_001269248.1|//Abscicic acid stress ripening protein 4 [Solanum lycopersicum]
Solyc03g078405.1.1	1830	0.669527329527079	8.61589671598326	3.68578610408993	0.0328818210577158	Up	0.011462307683456	NA	NA	NA	NA	gi|970035445|ref|XP_015079056.1|//PREDICTED: uncharacterized protein LOC107023007 [Solanum pennellii]
Solyc11g011350.2.1	3452	118.254769404716	822.099306322984	2.79741430530486	8.45327489281781e-19	Up	1.78026700255034e-20	NA	NA	NA	K03283//heat shock 70kDa protein 1/8;K19613//leucine-rich repeat protein SHOC2;K00083//cinnamyl-alcohol dehydrogenase [EC:1.1.1.195]	gi|723741826|ref|XP_010312682.1|//PREDICTED: TMV resistance protein N-like isoform X1 [Solanum lycopersicum];gi|723741829|ref|XP_010312683.1|//PREDICTED: TMV resistance protein N-like isoform X2 [Solanum lycopersicum]
Solyc06g007700.3.1	1362	2697.20079137547	9181.75479528397	1.76730697838372	1.04317682737223e-07	Up	1.0187577485147e-08	NA	NA	NA	K13344//peroxin-13	gi|460389618|ref|XP_004240448.1|//PREDICTED: peroxisomal membrane protein 13 [Solanum lycopersicum]
Solyc01g079810.3.1	2372	650.30150773321	5553.12732254217	3.09411980073132	1.41188245931904e-29	Up	1.06306939310588e-31	GO:0016020//membrane	GO:0008270//zinc ion binding;GO:0004842//ubiquitin-protein transferase activity	GO:0009561//megagametogenesis;GO:0016567//protein ubiquitination;GO:0051726//regulation of cell cycle;GO:0010498//proteasomal protein catabolic process;GO:0055046//microgametogenesis	K19043//E3 ubiquitin-protein ligase RHF [EC:2.3.2.27]	gi|460367116|ref|XP_004229421.1|//PREDICTED: E3 ubiquitin-protein ligase RHF1A [Solanum lycopersicum]
Solyc07g064570.3.1	1907	161.186174180817	394.571895034297	1.29156019664712	3.57386351152769e-07	Up	3.8498827897402e-08	NA	NA	NA	NA	gi|460397134|ref|XP_004244123.1|//PREDICTED: uncharacterized protein LOC101249283 [Solanum lycopersicum]
Solyc06g083560.3.1	1275	56.9817313180235	0.502166564892296	-6.82618967186446	1.16098199933581e-07	Down	1.14419129500667e-08	NA	NA	NA	NA	gi|723711403|ref|XP_010323083.1|//PREDICTED: uncharacterized protein LOC101262531 isoform X2 [Solanum lycopersicum]
Solyc12g088390.1.1	603	86.5420458400915	745.069985936471	3.10590281585898	9.53313984980885e-05	Up	1.656964034578e-05	NA	NA	NA	NA	gi|460414938|ref|XP_004252818.1|//PREDICTED: zinc finger protein ZAT10-like [Solanum lycopersicum]
Solyc05g014140.2.1	1077	23.5544959756475	265.7549125171	3.49602199408564	2.82993424275475e-17	Up	7.13074231438127e-19	GO:0016021//integral component of membrane	GO:0003824//catalytic activity	GO:0008152//metabolic process	K10251//17beta-estradiol 17-dehydrogenase / very-long-chain 3-oxoacyl-CoA reductase [EC:1.1.1.62 1.1.1.330]	gi|460386970|ref|XP_004239165.1|//PREDICTED: very-long-chain 3-oxoacyl-CoA reductase-like protein At1g24470 isoform X1 [Solanum lycopersicum]
Solyc03g005770.3.1	909	23155.0099621322	382.647580203806	-5.91916429117669	1.3266585774178e-48	Down	2.12637240304776e-51	GO:0031224//intrinsic component of membrane;GO:0009521//photosystem;GO:0009534//chloroplast thylakoid	GO:0043169//cation binding;GO:0046906//tetrapyrrole binding	GO:0006464//cellular protein modification process;GO:0006091//generation of precursor metabolites and energy	K08912//light-harvesting complex II chlorophyll a/b binding protein 1	gi|460376914|ref|XP_004234241.1|//PREDICTED: uncharacterized protein LOC101245729 [Solanum lycopersicum]
Solyc09g010800.4.1	850	10508.1562082102	28221.1352297684	1.42526647126065	0.0240258249950191	Up	0.00797129373343765	NA	GO:0046872//metal ion binding	NA	NA	gi|970052567|ref|XP_015087895.1|//PREDICTED: metallothionein-like protein type 2 B [Solanum pennellii];gi|914615145|ref|NP_001234046.2|//metallothionein-like protein type 2 B [Solanum lycopersicum]
Solyc05g041540.3.1	2059	1.93001206154137	557.835790288561	8.17508682565299	1.55734279901174e-30	Up	1.10873890939035e-32	NA	GO:0004180//carboxypeptidase activity	GO:0019538//protein metabolic process	K16298//serine carboxypeptidase-like clade IV [EC:3.4.16.-]	gi|970027588|ref|XP_015075093.1|//PREDICTED: serine carboxypeptidase-like [Solanum pennellii];gi|460389040|ref|XP_004240167.1|//PREDICTED: serine carboxypeptidase-like [Solanum lycopersicum]
Solyc04g009540.1.1	690	5216.04201166108	1115.46826994494	-2.22530601355958	2.86381644901604e-08	Down	2.52243859737025e-09	GO:0030529//intracellular ribonucleoprotein complex;GO:0009536//plastid	GO:0003723//RNA binding	GO:0022613//ribonucleoprotein complex biogenesis;GO:0010467//gene expression	K02864//large subunit ribosomal protein L10	gi|460382179|ref|XP_004236817.1|//PREDICTED: 50S ribosomal protein L10, chloroplastic [Solanum lycopersicum]
Solyc04g005630.3.1	2371	1222.93733374224	379.085744451922	-1.6897543686016	3.42310140099595e-09	Down	2.63482346543039e-10	NA	NA	NA	K15032//mTERF domain-containing protein, mitochondrial	gi|460382633|ref|XP_004237042.1|//PREDICTED: uncharacterized protein LOC101248094 [Solanum lycopersicum]
Solyc05g009120.3.1	1293	35.9500469942384	1296.82690822296	5.1728484643646	1.19139496131681e-31	Up	7.68269450975879e-34	NA	NA	NA	NA	gi|460386450|ref|XP_004238911.1|//PREDICTED: uncharacterized protein LOC101249358 [Solanum lycopersicum]
Solyc11g006500.2.1	1618	558.875490324555	3087.26396512391	2.46573002893053	1.62932454336274e-13	Up	6.48013004237381e-15	NA	NA	GO:0006810//transport	K12198//charged multivesicular body protein 5	gi|460409025|ref|XP_004249941.1|//PREDICTED: charged multivesicular body protein 5-like [Solanum lycopersicum]
Solyc07g044960.1.1	1575	39.4349170096086	636.907411402533	4.0135381483941	4.63919172003688e-08	Up	4.25045968683862e-09	NA	GO:0016740//transferase activity	NA	K20888;K16911//ATP-dependent RNA helicase DDX21 [EC:3.6.4.13]	gi|460396096|ref|XP_004243615.1|//PREDICTED: xyloglucan galactosyltransferase KATAMARI1 homolog [Solanum lycopersicum]
Solyc10g086680.1.1	705	104.06615694063	6042.54096304809	5.8595824729463	6.65269487835466e-32	Up	4.1163983517477e-34	NA	NA	NA	K13993//HSP20 family protein	gi|723740009|ref|XP_010312365.1|//PREDICTED: 18.1 kDa class I heat shock protein-like [Solanum lycopersicum]
Solyc02g069800.1.1	1008	759.654359353824	15492.7522975919	4.35010650682264	1.85581118278391e-10	Up	1.17112283153913e-11	NA	GO:0003824//catalytic activity	NA	K14493//gibberellin receptor GID1 [EC:3.-.-.-];K20506//tuliposide A-converting enzyme [EC:4.2.99.22]	gi|460374749|ref|XP_004233172.1|//PREDICTED: probable carboxylesterase 15 [Solanum lycopersicum]
Solyc07g062860.3.1	2465	557.825857586687	264.981441277546	-1.07392349093164	0.00157365121921972	Down	0.000366137278603305	NA	NA	NA	K06692//26S proteasome non-ATPase regulatory subunit 5	gi|460397390|ref|XP_004244250.1|//PREDICTED: uncharacterized protein LOC101261434 [Solanum lycopersicum];gi|697122079|ref|XP_009615027.1|//PREDICTED: uncharacterized protein LOC104107825 isoform X1 [Nicotiana tomentosiformis]
Solyc06g048410.3.1	1384	16790.1393134751	2072.53124197968	-3.01814844622347	5.3740581836845e-09	Down	4.25870273539334e-10	GO:0009536//plastid	GO:0016209//antioxidant activity;GO:0004784//superoxide dismutase activity;GO:0043169//cation binding;GO:0046872//metal ion binding;GO:0003824//catalytic activity	GO:0019430//removal of superoxide radicals;GO:0072593//reactive oxygen species metabolic process;GO:0055114//oxidation-reduction process	K04564//superoxide dismutase, Fe-Mn family [EC:1.15.1.1]	gi|924183304|ref|NP_001233789.2|//iron superoxide dismutase isoform 2 [Solanum lycopersicum];gi|924183549|ref|NP_001300698.1|//iron superoxide dismutase isoform 1 [Solanum lycopersicum]
Solyc01g006150.3.1	1425	914.368295022888	2655.13038798813	1.53793542529808	0.000969250725045698	Up	0.000214927410291369	GO:0044464//cell part	GO:0015075//ion transmembrane transporter activity	GO:0006811//ion transport	NA	gi|460365510|ref|XP_004228644.1|//PREDICTED: metal tolerance protein 4-like [Solanum lycopersicum]
Solyc05g012660.2.1	2052	5.28934982854864	42.2193779845276	2.99674302267601	0.000468992113785679	Up	9.59905955269556e-05	NA	NA	NA	K18134//protein O-GlcNAc transferase [EC:2.4.1.255]	gi|723698667|ref|XP_010320891.1|//PREDICTED: uncharacterized protein LOC101251980 isoform X1 [Solanum lycopersicum]
Solyc01g088480.3.1	3061	1361.68787132333	3594.54598043913	1.40041351443614	8.95493361436744e-06	Up	1.26406491716153e-06	GO:0044424//intracellular part;GO:0048046//apoplast;GO:0005634//nucleus;GO:0005829//cytosol	GO:0009041//uridylate kinase activity;GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0016776//phosphotransferase activity, phosphate group as acceptor;GO:0004127//cytidylate kinase activity;GO:0019205//nucleobase-containing compound kinase activity	GO:0006221//pyrimidine nucleotide biosynthetic process;GO:0046939//nucleotide phosphorylation;GO:0006207//'de novo' pyrimidine nucleobase biosynthetic process;GO:0006796//phosphate-containing compound metabolic process;GO:0009117//nucleotide metabolic process	K13800//UMP-CMP kinase [EC:2.7.4.- 2.7.4.14]	gi|831362681|ref|NP_001296740.1|//UMP-CMP kinase 3 [Solanum lycopersicum]
Solyc02g067810.1.1	315	9.11368199069223	87.6946118362524	3.26638226710052	1.44740446062368e-06	Up	1.75125796898183e-07	NA	NA	NA	NA	gi|665821185|ref|NP_001287929.1|//uncharacterized protein LOC101257136 [Solanum lycopersicum]
Solyc07g045140.3.1	1968	30.855339664242	9.22582386617379	-1.7417705215419	0.0413749575578529	Down	0.0149534660981416	GO:0016021//integral component of membrane	NA	GO:0003006//developmental process involved in reproduction;GO:0010228//vegetative to reproductive phase transition of meristem	NA	gi|460396073|ref|XP_004243604.1|//PREDICTED: uncharacterized membrane protein At3g27390 [Solanum lycopersicum];gi|970039436|ref|XP_015081055.1|//PREDICTED: uncharacterized membrane protein At3g27390 [Solanum pennellii]
Solyc09g066460.3.1	2511	420.769381685393	890.585791828767	1.08172486837605	0.00347029035544326	Up	0.000886176066876918	NA	NA	NA	K08790//serine/threonine kinase 38 [EC:2.7.11.1]	gi|460403524|ref|XP_004247240.1|//PREDICTED: serine/threonine-protein kinase tricorner-like isoform X2 [Solanum lycopersicum];gi|723730828|ref|XP_010326452.1|//PREDICTED: serine/threonine-protein kinase tricorner-like isoform X3 [Solanum lycopersicum];gi|723730823|ref|XP_010326451.1|//PREDICTED: serine/threonine-protein kinase tricorner-like isoform X1 [Solanum lycopersicum]
Solyc09g015520.3.1	4572	393.622183859521	114.189506794535	-1.78538144739006	0.00826470257841291	Down	0.00235513833353089	GO:0031224//intrinsic component of membrane	GO:0004713//protein tyrosine kinase activity;GO:0032559//adenyl ribonucleotide binding;GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;GO:0004871//signal transducer activity	GO:0006464//cellular protein modification process	K00924;K20718//null	gi|460401561|ref|XP_004246289.1|//PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 [Solanum lycopersicum]
Solyc06g073840.3.1	3628	1743.89568296081	12876.0608450278	2.88430565120233	1.90062600197069e-11	Up	1.02016603654309e-12	NA	NA	NA	K01802//peptidylprolyl isomerase [EC:5.2.1.8];K09571//FK506-binding protein 4/5 [EC:5.2.1.8]	gi|723707752|ref|XP_010322452.1|//PREDICTED: outer envelope protein 61 [Solanum lycopersicum]
Solyc05g008815.1.1	2767	903.289783492087	2256.96573581361	1.32112371975434	0.000131532514614927	Up	2.3656045289139e-05	GO:0005887//integral component of plasma membrane	GO:0008195//phosphatidate phosphatase activity	GO:0046839//phospholipid dephosphorylation;GO:0007165//signal transduction;GO:0006644//phospholipid metabolic process	K18693//diacylglycerol diphosphate phosphatase / phosphatidate phosphatase [EC:3.1.3.81 3.1.3.4]	gi|460386406|ref|XP_004238889.1|//PREDICTED: lipid phosphate phosphatase 2-like [Solanum lycopersicum]
Solyc11g069090.2.1	3445	19223.996307747	53769.9528860356	1.4838919310154	2.09609027688972e-05	Up	3.19476410548757e-06	NA	GO:0032559//adenyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity	GO:0009207//purine ribonucleoside triphosphate catabolic process	K06185//ATP-binding cassette, subfamily F, member 2	gi|970062491|ref|XP_015058139.1|//PREDICTED: ABC transporter F family member 1 [Solanum pennellii]
Solyc03g007710.3.1	1330	16.113030726493	165.51586191743	3.36066969819664	3.19851957435874e-09	Up	2.44288303558262e-10	NA	NA	NA	NA	gi|460376996|ref|XP_004234282.1|//PREDICTED: probable membrane-associated kinase regulator 5 isoform X1 [Solanum lycopersicum]
Solyc09g005100.3.1	2659	273.318033104623	108.367128563991	-1.33465344523342	1.78684565229638e-05	Down	2.67680508296524e-06	NA	NA	NA	K10863//aprataxin [EC:3.-.-.-]	gi|723728880|ref|XP_010326095.1|//PREDICTED: transcription factor bHLH140 [Solanum lycopersicum]
Solyc12g057040.2.1	2143	1703.24044858584	382.59449464558	-2.15439409721384	1.11979643390187e-08	Down	9.32050632511878e-10	NA	GO:0016830//carbon-carbon lyase activity	GO:0006259//DNA metabolic process	K12118//cryptochrome 1	gi|350537989|ref|NP_001234577.1|//cryptochrome 1b [Solanum lycopersicum]
Solyc12g006170.2.1	2370	254.510609145457	69.1339398299266	-1.88025974563789	0.00305236337371434	Down	0.000767755630155971	NA	NA	NA	K18834//WRKY transcription factor 1	gi|460412305|ref|XP_004251542.1|//PREDICTED: WRKY transcription factor 1 [Solanum lycopersicum]
Solyc10g083490.2.1	2728	3397.61937849817	1344.45504654929	-1.33750272451168	9.98247554907892e-06	Down	1.41878556987617e-06	GO:0032991//macromolecular complex;GO:0009536//plastid	GO:0032561//guanyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity	GO:0009207//purine ribonucleoside triphosphate catabolic process;GO:0043623//cellular protein complex assembly	K03531//cell division protein FtsZ	gi|460408026|ref|XP_004249449.1|//PREDICTED: cell division protein FtsZ homolog 2-1, chloroplastic [Solanum lycopersicum]
Solyc02g082950.3.1	1477	53.7440359041218	579.593693735516	3.43086532814688	5.96951004344225e-11	Up	3.49118877969319e-12	NA	NA	NA	K04427//mitogen-activated protein kinase kinase kinase 7 [EC:2.7.11.25];K16573//gamma-tubulin complex component 6	gi|460373483|ref|XP_004232548.1|//PREDICTED: protein trichome birefringence-like 34 [Solanum lycopersicum]
Solyc11g011170.2.1	2214	4159.77565690353	894.191549636647	-2.21784990652189	4.60805231124041e-10	Down	3.09688322542361e-11	GO:0009507//chloroplast	NA	GO:0034599//cellular response to oxidative stress;GO:0010150//leaf senescence;GO:0072593//reactive oxygen species metabolic process;GO:0010228//vegetative to reproductive phase transition of meristem	NA	gi|460409512|ref|XP_004250182.1|//PREDICTED: uncharacterized protein LOC101257426 [Solanum lycopersicum]
Solyc02g062350.3.1	2056	1394.55397030991	581.117093436842	-1.26290297188327	2.26963379631576e-05	Down	3.48211298107785e-06	NA	GO:0005515//protein binding	NA	K10523//speckle-type POZ protein;K02327//DNA polymerase delta subunit 1 [EC:2.7.7.7]	gi|460375511|ref|XP_004233549.1|//PREDICTED: uncharacterized protein LOC101249520 [Solanum lycopersicum]
Solyc11g071670.2.1	2332	92.0279075057225	33.2178113649261	-1.47011440444752	0.00131709272064044	Down	0.00030050412043537	NA	NA	NA	K17710//pentatricopeptide repeat domain-containing protein 1	gi|460412081|ref|XP_004251431.1|//PREDICTED: putative pentatricopeptide repeat-containing protein At1g02420 [Solanum lycopersicum]
Solyc01g108650.2.1	868	595.134712294806	167.14717742399	-1.8320972753195	0.000726502697839639	Down	0.000155845498213326	NA	NA	NA	K09422//myb proto-oncogene protein, plant	gi|460369953|ref|XP_004230821.1|//PREDICTED: uncharacterized protein LOC101251724 [Solanum lycopersicum]
Solyc04g011570.3.1	1536	127.674060447566	324.342110405696	1.34505090350105	0.000933332536425025	Up	0.000206232118530176	NA	GO:0046914//transition metal ion binding	NA	K10656//E3 ubiquitin-protein ligase MARCH1/8 [EC:2.3.2.27]	gi|460382020|ref|XP_004236738.1|//PREDICTED: uncharacterized protein LOC101258247 [Solanum lycopersicum]
Solyc06g005070.2.1	2155	117.649533805946	1.65257974469634	-6.15363190338268	2.12443941029289e-10	Down	1.35331256604687e-11	NA	NA	NA	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460389393|ref|XP_004240340.1|//PREDICTED: protein NRT1/ PTR FAMILY 3.1-like [Solanum lycopersicum]
Solyc01g103750.3.1	1853	3923.75856975247	733.988015584055	-2.41840786242906	1.23857486091251e-16	Down	3.32404167234608e-18	NA	NA	NA	K00765//ATP phosphoribosyltransferase [EC:2.4.2.17]	gi|460369226|ref|XP_004230464.1|//PREDICTED: ATP phosphoribosyltransferase 2, chloroplastic-like [Solanum lycopersicum]
Solyc01g105800.3.1	1252	267.231493698887	863.003870818819	1.69127698835277	2.27952287695467e-05	Up	3.49898434743526e-06	GO:0043231//intracellular membrane-bounded organelle;GO:0005634//nucleus	GO:0003677//DNA binding;GO:0003700//transcription factor activity, sequence-specific DNA binding;GO:0001071//nucleic acid binding transcription factor activity;GO:0046983//protein dimerization activity	GO:0006355//regulation of transcription, DNA-templated;GO:0006351//transcription, DNA-templated	K09260//MADS-box transcription enhancer factor 2A	gi|460369548|ref|XP_004230624.1|//PREDICTED: MADS-box protein SVP [Solanum lycopersicum]
Solyc03g062720.3.1	1084	1986.38466595537	69.5078979109104	-4.83682430450133	6.79458587585141e-11	Down	4.0066478513482e-12	NA	NA	NA	NA	gi|460378079|ref|XP_004234806.1|//PREDICTED: uncharacterized protein LOC101263383 [Solanum lycopersicum]
Solyc03g034170.3.1	1111	5097.68675274193	512.493882473389	-3.31423603535585	3.00829291618048e-22	Down	4.45166351469976e-24	NA	NA	NA	NA	gi|460377570|ref|XP_004234564.1|//PREDICTED: uncharacterized protein LOC101255370 [Solanum lycopersicum]
Solyc04g007250.1.1	798	7.60774602755964	80.8065096825312	3.40893052951915	1.81639462641997e-08	Up	1.5518027746215e-09	NA	NA	NA	NA	gi|723690426|ref|XP_010319421.1|//PREDICTED: uncharacterized protein LOC104646739 [Solanum lycopersicum]
Solyc02g078750.3.1	4382	373.465393727474	84.8268232860756	-2.13838212536038	4.82132835992825e-05	Down	7.84984429557425e-06	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460376069|ref|XP_004233823.1|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 isoform X2 [Solanum lycopersicum]
Solyc02g077470.3.1	1514	628.416373936046	3864.85253515885	2.62062069174058	1.04698484033044e-11	Up	5.42068712993508e-13	NA	NA	NA	NA	gi|723674904|ref|XP_010316781.1|//PREDICTED: OPA3-like protein [Solanum lycopersicum]
Solyc03g119640.3.1	2561	961.135665771686	172.33788413885	-2.47950020743041	7.94467576331214e-10	Down	5.55843015049086e-11	NA	NA	NA	K03695//ATP-dependent Clp protease ATP-binding subunit ClpB	gi|723685593|ref|XP_010318605.1|//PREDICTED: aluminum-activated malate transporter 9 [Solanum lycopersicum]
Solyc09g089620.1.1	861	0.384036838272631	6.23460095409245	4.02098061176399	0.0136863670087416	Up	0.00416590401794333	NA	NA	NA	NA	gi|460404461|ref|XP_004247701.1|//PREDICTED: putative DNA-binding protein ESCAROLA [Solanum lycopersicum]
Solyc04g007070.3.1	3209	923.068879534134	3569.98535338823	1.9514079441939	0.00171054299473233	Up	0.000401494305868104	NA	NA	NA	K13453;K13457//disease resistance protein RPM1	gi|460382462|ref|XP_004236958.1|//PREDICTED: putative late blight resistance protein homolog R1B-23 [Solanum lycopersicum]
Solyc03g112160.3.1	1461	835.45295587396	403.03580521525	-1.05165058107729	0.0367651254354153	Down	0.0130270345306791	NA	NA	NA	K15697//RING finger protein 114 [EC:2.3.2.27]	gi|723687988|ref|XP_010319020.1|//PREDICTED: protein DEHYDRATION-INDUCED 19 homolog 5-like isoform X1 [Solanum lycopersicum];gi|460381055|ref|XP_004236268.1|//PREDICTED: protein DEHYDRATION-INDUCED 19 homolog 5-like isoform X2 [Solanum lycopersicum]
Solyc03g114460.3.1	1814	1370.82101278287	629.148883330994	-1.12356684614827	9.10404119225691e-07	Down	1.05740988351992e-07	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K15164//mediator of RNA polymerase II transcription subunit 13;K01895//acetyl-CoA synthetase [EC:6.2.1.1]	gi|460380707|ref|XP_004236096.1|//PREDICTED: probable acyl-activating enzyme 17, peroxisomal isoform X2 [Solanum lycopersicum];gi|697108047|ref|XP_009607866.1|//PREDICTED: LOW QUALITY PROTEIN: probable acyl-activating enzyme 17, peroxisomal [Nicotiana tomentosiformis];gi|723687267|ref|XP_010318902.1|//PREDICTED: probable acyl-activating enzyme 17, peroxisomal isoform X1 [Solanum lycopersicum]
Solyc04g074920.2.1	1587	94.8498467633812	11.9530490789628	-2.9882667635692	0.000822336691264264	Down	0.000178886123833988	NA	NA	NA	NA	gi|723694496|ref|XP_004238535.2|//PREDICTED: uncharacterized protein LOC101245251 [Solanum lycopersicum]
Solyc03g116720.2.1	1885	6.63767561091949	64.7134735197807	3.28531608602279	0.0015923815795442	Up	0.000370791998188929	NA	GO:0060089//molecular transducer activity;GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	GO:0007165//signal transduction;GO:0008152//metabolic process	K14490//histidine-containing phosphotransfer peotein	gi|460380421|ref|XP_004235955.1|//PREDICTED: histidine-containing phosphotransfer protein 6 [Solanum lycopersicum]
Solyc09g030450.3.1	2889	914.139764493167	397.948811180477	-1.19983189198577	0.00302209877635353	Down	0.000758566168181179	GO:0009505//plant-type cell wall;GO:0009506//plasmodesma;GO:0016021//integral component of membrane;GO:0005886//plasma membrane	GO:0005524//ATP binding;GO:0004672//protein kinase activity	GO:0006468//protein phosphorylation	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460402918|ref|XP_004246956.1|//PREDICTED: probable inactive receptor kinase At5g58300 [Solanum lycopersicum]
Solyc06g081980.1.1	930	17339.1955352561	3656.0719910133	-2.24567058159372	3.72042734796401e-11	Down	2.10117898646114e-12	NA	NA	GO:0009108//coenzyme biosynthetic process	K06215//pyridoxal 5'-phosphate synthase pdxS subunit [EC:4.3.3.6]	gi|460393854|ref|XP_004242523.1|//PREDICTED: probable pyridoxal biosynthesis protein PDX1 [Solanum lycopersicum]
Solyc06g049090.3.1	3149	501.363614000716	177.009945351284	-1.50202687692293	3.28109256440372e-06	Down	4.25485352302093e-07	NA	GO:0008168//methyltransferase activity	GO:0044237//cellular metabolic process	K00555//tRNA (guanine26-N2/guanine27-N2)-dimethyltransferase [EC:2.1.1.215 2.1.1.216]	gi|970036311|ref|XP_015079487.1|//PREDICTED: tRNA (guanine(26)-N(2))-dimethyltransferase isoform X2 [Solanum pennellii];gi|460390500|ref|XP_004240869.1|//PREDICTED: tRNA (guanine(26)-N(2))-dimethyltransferase [Solanum lycopersicum]
Solyc03g098290.3.1	2922	370.532239749224	173.530614031676	-1.09440887234484	0.0311112995394248	Down	0.0107500278339968	GO:0005618//cell wall;GO:0016021//integral component of membrane	GO:0016157//sucrose synthase activity;GO:0035251//UDP-glucosyltransferase activity	GO:0005984//disaccharide metabolic process;GO:0005985//sucrose metabolic process;GO:0080165//callose deposition in phloem sieve plate	K00695//sucrose synthase [EC:2.4.1.13]	gi|698554592|ref|XP_009770260.1|//PREDICTED: sucrose synthase 5-like [Nicotiana sylvestris];gi|460379273|ref|XP_004235388.1|//PREDICTED: sucrose synthase 5-like [Solanum lycopersicum]
Solyc02g088750.2.1	1793	4.49987745425121	0.36311243891575	-3.63139745527622	0.032459501969222	Down	0.0112917723141601	NA	NA	NA	K04628//2-hydroxyacylsphingosine 1-beta-galactosyltransferase [EC:2.4.1.45];K13692//UDP-glucose:(indol-3-yl)acetate beta-D-glucosyltransferase [EC:2.4.1.121];K13691//pathogen-inducible salicylic acid glucosyltransferase [EC:2.4.1.-]	gi|460375748|ref|XP_004233666.1|//PREDICTED: UDP-glycosyltransferase 83A1 [Solanum lycopersicum]
Solyc07g053910.3.1	3193	1164.38746788225	3786.80004974609	1.70140802902907	9.43825377580081e-06	Up	1.33651133495852e-06	NA	NA	NA	K08819//cyclin-dependent kinase 12/13 [EC:2.7.11.22 2.7.11.23]	gi|460395576|ref|XP_004243358.1|//PREDICTED: probable serine/threonine-protein kinase At1g54610 [Solanum lycopersicum]
Solyc09g098290.3.1	3603	1436.17111440433	210.58917318213	-2.7697244796122	3.24950629858405e-05	Down	5.14533426136314e-06	GO:0016020//membrane	GO:0000166//nucleotide binding;GO:0004672//protein kinase activity;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K20718;K17422//large subunit ribosomal protein L41	gi|460405057|ref|XP_004247993.1|//PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 [Solanum lycopersicum]
Solyc07g064890.1.1	723	3071.6717901844	7364.93214985044	1.26164816281709	0.000184152165246715	Up	3.43277537795893e-05	NA	NA	NA	K09286//EREBP-like factor	gi|356460905|ref|NP_001239044.1|//ethylene responsive factor [Solanum lycopersicum]
Solyc03g083710.1.1	588	13.2988523839251	325.297476233505	4.61238596976011	1.37667642067427e-25	Up	1.44194898691468e-27	NA	NA	NA	K01051//pectinesterase [EC:3.1.1.11]	gi|460378679|ref|XP_004235096.1|//PREDICTED: 21 kDa protein-like [Solanum lycopersicum]
Solyc01g090950.3.1	1995	1303.82586729719	591.255373953727	-1.1408979066722	0.000503807674735313	Down	0.000103792493598557	NA	NA	NA	K14494//DELLA protein	gi|723660584|ref|XP_010325595.1|//PREDICTED: scarecrow-like protein 22 [Solanum lycopersicum]
Solyc02g090770.1.1	612	2.89544372570644	155.497844029143	5.74696630971318	2.26499864024782e-17	Up	5.63125873358169e-19	NA	NA	NA	K09286//EREBP-like factor	gi|970009230|ref|XP_015065485.1|//PREDICTED: ethylene-responsive transcription factor ERF095-like [Solanum pennellii]
Solyc10g008110.3.1	2843	1799.87679413633	6078.51984733949	1.755821908326	0.00055095863434527	Up	0.000114791865005054	NA	NA	NA	K00232//acyl-CoA oxidase [EC:1.3.3.6]	gi|698468757|ref|XP_009783429.1|//PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal isoform X2 [Nicotiana sylvestris];gi|460405441|ref|XP_004248184.1|//PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal-like isoform X1 [Solanum lycopersicum];gi|565397038|ref|XP_006364109.1|//PREDICTED: acyl-coenzyme A oxidase 3, peroxisomal isoform X2 [Solanum tuberosum]
Solyc10g051095.1.1	2414	12164.3659255586	5037.17883564877	-1.27197326372549	8.40568003475342e-05	Down	1.44345340391043e-05	NA	NA	NA	K01256//aminopeptidase N [EC:3.4.11.2];K19073//divinyl chlorophyllide a 8-vinyl-reductase [EC:1.3.1.75];K08956//AFG3 family protein [EC:3.4.24.-];K17525//chitinase domain-containing protein 1	gi|970056205|ref|XP_015089755.1|//PREDICTED: protein TIC 62, chloroplastic isoform X3 [Solanum pennellii];gi|723736372|ref|XP_010327445.1|//PREDICTED: protein TIC 62, chloroplastic isoform X4 [Solanum lycopersicum]
Solyc04g081440.3.1	2492	3010.56764680806	9034.50937746364	1.58541072226984	0.00010510497256906	Up	1.84564457198763e-05	NA	NA	NA	K11593//eukaryotic translation initiation factor 2C	gi|460385330|ref|XP_004238357.1|//PREDICTED: alkaline/neutral invertase CINV2 [Solanum lycopersicum]
Solyc12g017690.2.1	1692	204.029241116497	501.321311216537	1.29695963296454	0.000831805903125991	Up	0.000181318060290771	NA	NA	NA	K15407//queuine tRNA-ribosyltransferase subunit QTRTD1 [EC:2.4.2.29];K12813//pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:3.6.4.13]	gi|723749010|ref|XP_010313981.1|//PREDICTED: putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [Solanum lycopersicum];gi|460413185|ref|XP_004251975.1|//PREDICTED: queuine tRNA-ribosyltransferase subunit qtrtd1 [Solanum lycopersicum]
Solyc04g051700.3.1	1938	367.633985379266	841.416174579236	1.19454941076389	0.000520324304619886	Up	0.000107583081770035	NA	GO:0000166//nucleotide binding	NA	K07933//Rab-like protein 3	gi|460383513|ref|XP_004237466.1|//PREDICTED: uncharacterized GTP-binding protein At5g64813 [Solanum lycopersicum]
Solyc05g012870.1.1	1068	2.88297692026225	77.7307720080793	4.75285465243508	2.9644313089701e-10	Up	1.93039417652109e-11	NA	NA	NA	NA	gi|460386824|ref|XP_004239096.1|//PREDICTED: uncharacterized protein LOC101256486 [Solanum lycopersicum]
Solyc09g059430.3.1	1259	409.816676576653	4583.88380342731	3.48351987585855	2.49711929589321e-14	Up	8.8704140785233e-16	NA	NA	NA	K13456//RPM1-interacting protein 4	gi|723729898|ref|XP_010326285.1|//PREDICTED: RPM1-interacting protein 4 isoform X2 [Solanum lycopersicum];gi|723729895|ref|XP_010326284.1|//PREDICTED: RPM1-interacting protein 4 isoform X1 [Solanum lycopersicum]
Solyc10g005400.3.1	1342	1313.52717282209	10.0048035660746	-7.03660939375827	1.18568638864532e-36	Down	5.08252328515775e-39	GO:0044424//intracellular part	GO:0016701//oxidoreductase activity, acting on single donors with incorporation of molecular oxygen;GO:0046914//transition metal ion binding	GO:0006020//inositol metabolic process	K00469//inositol oxygenase [EC:1.13.99.1]	gi|460405858|ref|XP_004248391.1|//PREDICTED: inositol oxygenase 1-like [Solanum lycopersicum]
Solyc06g068770.3.1	2440	159.552338627225	39.5533525972922	-2.0121578651378	0.0369919267635221	Down	0.0131200817248149	NA	NA	NA	K20870	gi|460392103|ref|XP_004241657.1|//PREDICTED: probable beta-1,4-xylosyltransferase IRX10L [Solanum lycopersicum]
Solyc10g008655.1.1	372	230.487895167918	5.17058687469571	-5.47821913515791	1.20977554769312e-08	Down	1.01235504121479e-09	NA	NA	NA	K14329//agmatine coumaroyltransferase [EC:2.3.1.64 2.3.1.-];K13264//isoflavone 7-O-glucoside-6''-O-malonyltransferase [EC:2.3.1.115]	gi|970056030|ref|XP_015089662.1|//PREDICTED: malonyl-coenzyme:anthocyanin 5-O-glucoside-6'''-O-malonyltransferase-like [Solanum pennellii]
Solyc01g091700.3.1	1259	49.8385923980252	207.542608539815	2.05807232474623	0.0206536392584739	Up	0.00668407969477733	NA	NA	NA	NA	gi|460367964|ref|XP_004229840.1|//PREDICTED: F-box protein PP2-A13 [Solanum lycopersicum]
Solyc04g014290.1.1	348	65.6459944712581	0.975505816021084	-6.07241270020941	2.9478819420314e-07	Down	3.12171335817474e-08	NA	NA	NA	NA	gi|723690979|ref|XP_010319537.1|//PREDICTED: vegetative cell wall protein gp1-like [Solanum lycopersicum]
Solyc12g042780.2.1	866	29.7481330709531	0.799244088327877	-5.21801915255158	1.26407495162371e-05	Down	1.82863981185761e-06	NA	NA	NA	K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6];K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460413906|ref|XP_004252317.1|//PREDICTED: stellacyanin-like [Solanum lycopersicum]
Solyc03g112580.3.1	3461	1102.29132492526	85.8947889763694	-3.68179114511844	4.65075694582167e-15	Down	1.48218174618963e-16	GO:0031224//intrinsic component of membrane	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity;GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;GO:0004871//signal transducer activity	GO:0006464//cellular protein modification process	K00924;K17422//large subunit ribosomal protein L41	gi|460380991|ref|XP_004236236.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g26540 [Solanum lycopersicum]
Solyc07g042980.3.1	2460	419.572166783075	195.066595661685	-1.10495223321985	0.000437424551952964	Down	8.88773383291937e-05	NA	NA	NA	K10615//E3 ubiquitin-protein ligase HERC4 [EC:2.3.2.26]	gi|723716540|ref|XP_010323956.1|//PREDICTED: ultraviolet-B receptor UVR8 [Solanum lycopersicum];gi|970038056|ref|XP_015080364.1|//PREDICTED: ultraviolet-B receptor UVR8 [Solanum pennellii]
Solyc02g083800.3.1	733	99.261784308686	350.973767751872	1.82205291204576	1.88955215603113e-06	Up	2.33764112340366e-07	NA	NA	NA	K09250//cellular nucleic acid-binding protein	gi|460373376|ref|XP_004232496.1|//PREDICTED: cold shock domain-containing protein 3-like [Solanum lycopersicum]
Solyc02g081220.2.1	1590	38.0178872401281	12.1482088989379	-1.64593473741506	0.00600751197381905	Down	0.00164743050512102	NA	NA	NA	NA	gi|723673716|ref|XP_010316563.1|//PREDICTED: reticuline oxidase-like protein [Solanum lycopersicum]
Solyc01g080500.2.1	1336	6783.48347206376	19027.1751863422	1.48796316675946	0.00406358519414092	Up	0.00105936763261598	NA	NA	NA	NA	gi|460367232|ref|XP_004229479.1|//PREDICTED: uncharacterized protein LOC101268511 [Solanum lycopersicum]
Solyc06g083410.3.1	1360	94.1114965349452	32.597915049217	-1.52959127826456	0.0208017823008376	Down	0.00674111731487558	NA	NA	NA	NA	gi|723711442|ref|XP_010323087.1|//PREDICTED: protein XRI1 isoform X1 [Solanum lycopersicum]
Solyc06g071110.3.1	2033	225.20329901078	478.863297733684	1.08838590342425	2.9100757358371e-05	Up	4.55255250607884e-06	NA	GO:0005515//protein binding	GO:0044267//cellular protein metabolic process	K09510//DnaJ homolog subfamily B member 4	gi|460391912|ref|XP_004241562.1|//PREDICTED: dnaJ homolog subfamily B member 1 [Solanum lycopersicum]
Solyc09g082550.3.1	2340	346.168078489819	8.0199252328587	-5.43174009710125	4.8346986148317e-11	Down	2.77344608924481e-12	GO:0031224//intrinsic component of membrane	GO:0015291//secondary active transmembrane transporter activity	GO:0015698//inorganic anion transport	K17471//sulfate transporter 3	gi|460404239|ref|XP_004247591.1|//PREDICTED: sulfate transporter 3.1-like [Solanum lycopersicum]
Solyc07g045540.3.1	1868	1129.93876045971	343.108642428997	-1.71950721375249	2.43621622509281e-10	Down	1.56190991022798e-11	GO:0009536//plastid;GO:0009507//chloroplast	GO:0050661//NADP binding;GO:0016616//oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;GO:0000166//nucleotide binding;GO:0004345//glucose-6-phosphate dehydrogenase activity	GO:0006006//glucose metabolic process;GO:0006098//pentose-phosphate shunt;GO:0055114//oxidation-reduction process;GO:0019318//hexose metabolic process	K00036//glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]	gi|460395999|ref|XP_004243567.1|//PREDICTED: glucose-6-phosphate 1-dehydrogenase, chloroplastic [Solanum lycopersicum]
Solyc11g008600.1.1	405	0.775970496748441	48.3810075731936	5.9622952040807	5.1574740062182e-08	Up	4.7618395383191e-09	NA	NA	NA	NA	gi|970062151|ref|XP_015057959.1|//PREDICTED: uncharacterized protein LOC107004240 [Solanum pennellii]
Solyc09g031610.3.1	2629	711.640395898621	126.162191051671	-2.49586878610433	5.07804645917275e-13	Down	2.1540244783579e-14	GO:0080008//Cul4-RING E3 ubiquitin ligase complex;GO:0005634//nucleus	GO:0003684//damaged DNA binding;GO:0046914//transition metal ion binding	GO:0006281//DNA repair	K10140//DNA damage-binding protein 2	gi|460402928|ref|XP_004246959.1|//PREDICTED: protein DAMAGED DNA-BINDING 2 [Solanum lycopersicum];gi|697131565|ref|XP_009619842.1|//PREDICTED: protein DAMAGED DNA-BINDING 2 [Nicotiana tomentosiformis]
Solyc10g005340.3.1	1313	553.574362494601	138.282414152683	-2.00115943377229	0.014316452026274	Down	0.00438437341016354	NA	NA	NA	NA	gi|460405866|ref|XP_004248395.1|//PREDICTED: CRIB domain-containing protein RIC10 [Solanum lycopersicum];gi|565372033|ref|XP_006352603.1|//PREDICTED: CRIB domain-containing protein RIC10 isoform X1 [Solanum tuberosum]
Solyc12g094550.2.1	2952	801.380074623131	2825.61286010009	1.81800526978988	1.25951196454103e-08	Up	1.05585299249023e-09	NA	NA	NA	K20777	gi|460415560|ref|XP_004253126.1|//PREDICTED: uncharacterized protein LOC101250784 [Solanum lycopersicum]
Solyc01g110000.3.1	2839	799.794693624188	221.932680281438	-1.84950758483506	0.00046405005090195	Down	9.48407048268746e-05	GO:0005618//cell wall;GO:0005773//vacuole	GO:0004565//beta-galactosidase activity;GO:0015925//galactosidase activity;GO:0043167//ion binding	GO:0044238//primary metabolic process;GO:0005975//carbohydrate metabolic process	K12309//beta-galactosidase [EC:3.2.1.23]	gi|723665966|ref|XP_010315322.1|//PREDICTED: beta-galactosidase 3-like [Solanum lycopersicum];gi|661899019|emb|CDO97013.1|//unnamed protein product [Coffea canephora]
Solyc08g008270.3.1	577	437.80010278437	57.7026220278219	-2.92356351117461	1.23380902428255e-07	Down	1.22194370714132e-08	NA	NA	NA	NA	gi|460398157|ref|XP_004244629.1|//PREDICTED: uncharacterized protein LOC101258284 [Solanum lycopersicum]
Solyc09g007410.3.1	2399	534.806679696179	128.186791411575	-2.06076987287309	3.05466196518166e-05	Down	4.79923966871951e-06	NA	NA	NA	K14411//RNA-binding protein Musashi	gi|460402366|ref|XP_004246683.1|//PREDICTED: protein IQ-DOMAIN 1 [Solanum lycopersicum]
Solyc03g113960.3.1	2728	9.71923905696007	917.071201095314	6.56004657217167	2.2544362443817e-53	Up	2.18485695370226e-56	NA	NA	NA	NA	gi|723687446|ref|XP_004236138.2|//PREDICTED: uncharacterized protein LOC101255381 isoform X2 [Solanum lycopersicum]
Solyc04g077990.3.1	872	8.65455214120991	1.03868125744765	-3.05870616548733	0.0238610291619335	Down	0.00790327661894068	NA	NA	NA	NA	gi|723695139|ref|XP_004238097.2|//PREDICTED: LOB domain-containing protein 38-like [Solanum lycopersicum]
Solyc10g080730.2.1	2593	1118.22466684782	431.097504566749	-1.37512395822213	1.38785205451088e-05	Down	2.02787388313801e-06	NA	NA	NA	K03671//thioredoxin 1	gi|460407737|ref|XP_004249307.1|//PREDICTED: thioredoxin-like 1-1, chloroplastic isoform X1 [Solanum lycopersicum]
Solyc01g096660.3.1	1800	15511.2696819364	1191.31998084288	-3.70268391473491	5.68654398239286e-43	Down	1.35656334752178e-45	NA	NA	NA	NA	gi|350536853|ref|NP_001234524.1|//uncharacterized protein LOC543930 [Solanum lycopersicum]
Solyc02g065420.3.1	1351	44.2880456366081	12.9915979258881	-1.76933844603831	0.00932460341757738	Down	0.00270270300339503	NA	NA	NA	NA	gi|460375236|ref|XP_004233413.1|//PREDICTED: CASP-like protein 5C3 [Solanum lycopersicum]
Solyc08g078500.3.1	2646	179.426755290873	66.3627706608691	-1.43494900882207	0.0124639796409635	Down	0.00374356465084432	NA	NA	NA	K03040//DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]	gi|460400513|ref|XP_004245779.1|//PREDICTED: uncharacterized protein LOC101259563 [Solanum lycopersicum]
Solyc08g080680.3.1	903	131.475203647766	1373.13015385156	3.38460574302511	5.14503888694403e-37	Up	2.05203205942676e-39	NA	NA	NA	K12486//stromal membrane-associated protein;K01803//triosephosphate isomerase (TIM) [EC:5.3.1.1]	gi|460400207|ref|XP_004245627.1|//PREDICTED: elicitor-responsive protein 3 [Solanum lycopersicum]
Solyc04g077500.3.1	2136	7653.11804378839	874.125968794751	-3.13013454822724	4.09954141914557e-35	Down	1.95594640543698e-37	NA	NA	NA	K00939//adenylate kinase [EC:2.7.4.3]	gi|460384754|ref|XP_004238074.1|//PREDICTED: uncharacterized protein LOC101254084 [Solanum lycopersicum]
Solyc04g007870.3.1	3711	398.157691956174	1211.76587685542	1.60569915093662	0.00231026134820523	Up	0.000560428688464278	NA	NA	NA	K06268//serine/threonine-protein phosphatase 2B regulatory subunit;K11844//ubiquitin carboxyl-terminal hydrolase 16/45 [EC:3.4.19.12]	gi|460382438|ref|XP_004236946.1|//PREDICTED: cingulin isoform X1 [Solanum lycopersicum]
Solyc06g008130.3.1	2452	306.677696992192	859.621038592266	1.48697754107336	5.72259616092841e-05	Up	9.49074348224323e-06	NA	GO:0018024//histone-lysine N-methyltransferase activity	GO:0034968//histone lysine methylation	NA	gi|460389674|ref|XP_004240475.1|//PREDICTED: histone-lysine N-methyltransferase SUVR2 [Solanum lycopersicum];gi|970037662|ref|XP_015080177.1|//PREDICTED: probable inactive histone-lysine N-methyltransferase SUVR2 isoform X1 [Solanum pennellii]
Solyc03g025420.3.1	2164	1296.94522680322	535.866757996541	-1.27517132463279	0.0391955401960865	Down	0.0140401498913222	NA	NA	GO:0006511//ubiquitin-dependent protein catabolic process	K03094//S-phase kinase-associated protein 1	gi|460377266|ref|XP_004234414.1|//PREDICTED: SKP1-like protein 21 isoform X1 [Solanum lycopersicum];gi|723679741|ref|XP_010317624.1|//PREDICTED: SKP1-like protein 21 isoform X2 [Solanum lycopersicum]
Solyc07g055660.2.1	933	369.408095301478	1273.4270921697	1.78542897564761	0.000365649216875891	Up	7.28627073735841e-05	NA	NA	NA	NA	gi|970038002|ref|XP_015080336.1|//PREDICTED: uncharacterized protein LOC107023990 [Solanum pennellii];gi|460395354|ref|XP_004243249.1|//PREDICTED: uncharacterized protein LOC101261042 [Solanum lycopersicum]
Solyc03g059070.3.1	3402	317.346815359551	93.9493789902447	-1.75610483444408	8.35809932172603e-05	Down	1.43434804224044e-05	NA	GO:0000166//nucleotide binding;GO:0004672//protein kinase activity	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460378036|ref|XP_004234787.1|//PREDICTED: probable receptor-like protein kinase At5g24010 [Solanum lycopersicum]
Solyc07g061930.1.1	195	39.9670968981545	1.36443755024906	-4.87243451342614	0.00234337538546257	Down	0.00056950974777158	NA	NA	NA	NA	NA
Solyc04g016180.3.1	3214	219.028102074637	1798.47780418586	3.03758846498758	2.24514718922401e-15	Up	6.92089132804629e-17	NA	GO:0016740//transferase activity	NA	K18134//protein O-GlcNAc transferase [EC:2.4.1.255]	gi|460381731|ref|XP_004236596.1|//PREDICTED: EGF domain-specific O-linked N-acetylglucosamine transferase-like [Solanum lycopersicum]
Solyc02g063000.3.1	1743	2069.03498154501	145.286730474154	-3.83198318939861	3.04405373950654e-16	Down	8.54395581425534e-18	NA	NA	NA	K12356//coniferyl-alcohol glucosyltransferase [EC:2.4.1.111]	gi|460375424|ref|XP_004233506.1|//PREDICTED: anthocyanidin 3-O-glucosyltransferase 5-like [Solanum lycopersicum]
Solyc09g005250.3.1	1638	1303.16423168347	384.789708562915	-1.75987679248981	0.00493662656626141	Down	0.00131732926747672	GO:0031224//intrinsic component of membrane;GO:0019866//organelle inner membrane	NA	GO:0006810//transport	K14684//solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41	gi|460402543|ref|XP_004246771.1|//PREDICTED: probable envelope ADP,ATP carrier protein, chloroplastic [Solanum lycopersicum]
Solyc01g098060.1.1	459	5.30594386141688	70.2125268485657	3.72604713289107	0.00153436344703861	Up	0.000356138407063866	NA	NA	NA	K12412//pheromone receptor transcription factor	gi|460370823|ref|XP_004231248.1|//PREDICTED: agamous-like MADS-box protein AGL61 [Solanum lycopersicum]
Solyc05g012600.3.1	883	3837.28491351157	418.754230844755	-3.19591021540433	6.11685445146863e-09	Down	4.9020564599141e-10	NA	NA	NA	NA	gi|460386784|ref|XP_004239076.1|//PREDICTED: uncharacterized protein LOC101250301 [Solanum lycopersicum]
Solyc03g019700.1.1	210	83.1357033162296	242.691165612538	1.54558150027514	0.00210351664180918	Up	0.000504865948136624	NA	NA	NA	NA	gi|460377052|ref|XP_004234309.1|//PREDICTED: uncharacterized protein LOC101248948 [Solanum lycopersicum]
Solyc06g007350.3.1	1466	2541.52928958386	467.035822892779	-2.44409173921995	1.82827001133529e-12	Down	8.46396061606689e-14	NA	GO:0003824//catalytic activity	NA	K17508//protein phosphatase PTC7 [EC:3.1.3.16]	gi|460389562|ref|XP_004240420.1|//PREDICTED: probable protein phosphatase 2C 26 isoform X1 [Solanum lycopersicum]
Solyc06g065390.3.1	850	6559.69260593288	1628.69495764268	-2.00991178702952	0.0005933370957177	Down	0.000124825213968802	NA	NA	NA	K02888//large subunit ribosomal protein L21	gi|460392441|ref|XP_004241824.1|//PREDICTED: 50S ribosomal protein L21, chloroplastic [Solanum lycopersicum]
Solyc01g097520.3.1	1599	1522.47420863605	8060.63327763855	2.40447539899734	2.37387733192733e-07	Up	2.4705474256283e-08	NA	GO:0005488//binding	NA	K17099//annexin A13	gi|460368505|ref|XP_004230106.1|//PREDICTED: annexin D4-like [Solanum lycopersicum]
Solyc08g076530.3.1	2411	491.960782852101	1484.4134041927	1.59327771430779	3.66268505027574e-06	Up	4.77836502011521e-07	NA	GO:0003824//catalytic activity;GO:0005488//binding	GO:0008152//metabolic process	NA	gi|460400873|ref|XP_004245956.1|//PREDICTED: uncharacterized protein LOC101261352 isoform X1 [Solanum lycopersicum]
Solyc03g007320.3.1	2163	3.51641501799203	345.489341213874	6.61839204031038	1.84617272747211e-19	Up	3.64032120483355e-21	NA	GO:0005488//binding;GO:0016491//oxidoreductase activity	NA	K14948//polypyrimidine tract-binding protein 2;K14496//abscisic acid receptor PYR/PYL family;K08955//ATP-dependent metalloprotease [EC:3.4.24.-]	gi|460376782|ref|XP_004234175.1|//PREDICTED: abscisic acid receptor PYL8 [Solanum lycopersicum];gi|460376784|ref|XP_004234176.1|//PREDICTED: polypyrimidine tract-binding protein homolog 2 isoform X1 [Solanum lycopersicum]
Solyc01g008800.2.1	5618	127.659182885827	1096.79617236868	3.10292621775715	5.68622205910303e-13	Up	2.43955628076174e-14	NA	NA	NA	K03283//heat shock 70kDa protein 1/8	gi|460365215|ref|XP_004228499.1|//PREDICTED: TMV resistance protein N-like [Solanum lycopersicum]
Solyc04g040140.1.1	381	0.914271880029557	10.122930974411	3.4688600074573	0.0247979589204716	Up	0.0082644457547315	NA	NA	NA	NA	NA
Solyc08g082230.3.1	2595	421.692649576333	1028.13262849172	1.28576260365383	0.000741101609201495	Up	0.000159502038598831	NA	NA	NA	NA	gi|460399990|ref|XP_004245519.1|//PREDICTED: uncharacterized protein LOC101257691 [Solanum lycopersicum]
Solyc02g067085.1.1	2357	957.612563808385	2629.67558828253	1.45737084586596	1.50719213068977e-07	Up	1.51460786653482e-08	NA	NA	NA	K00012//UDPglucose 6-dehydrogenase [EC:1.1.1.22]	gi|48093457|gb|AAT40105.1|//putative UDP-glucose dehydrogenase 1 [Nicotiana tabacum]
Solyc05g056595.1.1	1591	1160.5406076118	471.722832241656	-1.29878566710312	0.000964201409851503	Down	0.000213699924816499	NA	NA	NA	K10615//E3 ubiquitin-protein ligase HERC4 [EC:2.3.2.26]	gi|723700871|ref|XP_010321297.1|//PREDICTED: ultraviolet-B receptor UVR8 isoform X3 [Solanum lycopersicum];gi|723700868|ref|XP_010321296.1|//PREDICTED: ultraviolet-B receptor UVR8 isoform X2 [Solanum lycopersicum];gi|460387928|ref|XP_004239624.1|//PREDICTED: ultraviolet-B receptor UVR8 isoform X1 [Solanum lycopersicum];gi|723700876|ref|XP_010321298.1|//PREDICTED: ultraviolet-B receptor UVR8 isoform X4 [Solanum lycopersicum]
Solyc01g094040.3.1	1094	710.551731169355	2600.35845198476	1.87169891565105	6.04448595926365e-08	Up	5.67768921177292e-09	NA	NA	NA	K11886//proteasome component ECM29	gi|460368033|ref|XP_004229874.1|//PREDICTED: cucumber peeling cupredoxin-like [Solanum lycopersicum]
Solyc03g007650.1.1	822	114.554447393407	335.546354624021	1.55047861370278	0.00473600955150567	Up	0.00125743984029279	NA	GO:0005515//protein binding	GO:0044267//cellular protein metabolic process	K09510//DnaJ homolog subfamily B member 4	gi|849536176|ref|NP_001233892.2|//DnaJ like protein [Solanum lycopersicum]
Solyc11g069770.2.1	852	66.7986586320847	9.66596175355065	-2.78883394116736	1.59556017256865e-05	Down	2.36467393996308e-06	NA	NA	NA	K09260//MADS-box transcription enhancer factor 2A;K04454//MADS-box transcription enhancer factor 2C	gi|460412031|ref|XP_004251407.1|//PREDICTED: agamous-like MADS-box protein AGL62 [Solanum lycopersicum]
Solyc06g068130.3.1	1212	13.8350258194384	0.531129468819683	-4.70311794899199	0.00250305226748393	Down	0.000614753667453839	NA	NA	NA	NA	gi|460392180|ref|XP_004241695.1|//PREDICTED: myb-like protein O [Solanum lycopersicum]
Solyc07g006550.2.1	772	99.449518572008	14.4556906345354	-2.78232685048676	0.0174167242255074	Down	0.00548248978993625	NA	NA	NA	K01166//ribonuclease T2 [EC:3.1.27.1]	gi|565353259|ref|XP_006343550.1|//PREDICTED: intracellular ribonuclease LX-like [Solanum tuberosum]
Solyc06g076160.3.1	564	3.79625550744053	233.848740655241	5.94485475281946	7.95085341619206e-18	Up	1.85820228565395e-19	NA	GO:0005506//iron ion binding;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K20617	gi|460391230|ref|XP_004241226.1|//PREDICTED: cytochrome P450 71A9-like [Solanum lycopersicum]
Solyc07g065870.3.1	1323	275.652511787289	111.540630943145	-1.30528141064963	0.0312601227545061	Down	0.0108165990580766	NA	NA	NA	NA	gi|460396928|ref|XP_004244022.1|//PREDICTED: uncharacterized protein LOC101244505 [Solanum lycopersicum]
Solyc01g008260.3.1	1146	209.17504311032	79.1060458722463	-1.40285086691522	0.000534814479583205	Down	0.000110917987341619	NA	NA	NA	NA	gi|460365280|ref|XP_004228531.1|//PREDICTED: E2F-associated phosphoprotein [Solanum lycopersicum]
Solyc12g096570.1.1	357	99.9570373137378	838.087834987278	3.06772140583884	2.37393309062007e-13	Up	9.63624994664251e-15	NA	NA	NA	NA	gi|930588896|ref|NP_001234679.2|//ARGOS [Solanum lycopersicum]
Solyc11g012710.2.1	1651	130.16545180979	57.658244607297	-1.1747477627067	0.0109773576706119	Down	0.00324517010905111	NA	NA	NA	K07199//5'-AMP-activated protein kinase, regulatory beta subunit	gi|525313964|ref|NP_001266176.1|//Tau2 [Solanum lycopersicum]
Solyc12g100030.2.1	2799	22.5264584407166	223.341697703249	3.30956020699828	1.20361226008845e-15	Up	3.60258179831156e-17	NA	NA	NA	K19613//leucine-rich repeat protein SHOC2;K10406//kinesin family member C2/C3	gi|460415003|ref|XP_004252850.1|//PREDICTED: receptor-like protein 12 [Solanum lycopersicum]
Solyc02g082760.3.1	2114	52373.7234919824	2274.82732161736	-4.52501423436076	5.05149173399623e-18	Down	1.14669690845523e-19	GO:0042579//microbody	GO:0004601//peroxidase activity;GO:0005506//iron ion binding	GO:0042743//hydrogen peroxide metabolic process;GO:0006950//response to stress	K03781//catalase [EC:1.11.1.6]	gi|854282574|ref|NP_001234186.2|//catalase isozyme 2 [Solanum lycopersicum]
Solyc07g022830.3.1	1867	205.19137859968	16.2452286596381	-3.65888215981551	3.8492288951557e-11	Down	2.18086622954997e-12	GO:0005794//Golgi apparatus;GO:0016021//integral component of membrane;GO:0005886//plasma membrane	NA	NA	K09598//signal peptide peptidase-like 3 [EC:3.4.23.-]	gi|723713713|ref|XP_010323434.1|//PREDICTED: SPX and EXS domain-containing protein 1-like isoform X5 [Solanum lycopersicum];gi|460395079|ref|XP_004243116.1|//PREDICTED: SPX and EXS domain-containing protein 1-like isoform X1 [Solanum lycopersicum];gi|697180849|ref|XP_009599408.1|//PREDICTED: SPX and EXS domain-containing protein 1 [Nicotiana tomentosiformis]
Solyc04g009800.3.1	2538	1009.59795857796	3572.25054105538	1.82305236964934	1.19878709448635e-09	Up	8.5882987759161e-11	NA	GO:0046872//metal ion binding;GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process	K13412//calcium-dependent protein kinase [EC:2.7.11.1]	gi|350536939|ref|NP_001234784.1|//calcium dependent protein kinase [Solanum lycopersicum]
Solyc02g079750.3.1	1058	390.205703079374	1641.85392259061	2.07301900575757	2.63920093295171e-14	Up	9.41447477573722e-16	NA	GO:0000166//nucleotide binding;GO:0010181//FMN binding;GO:0003824//catalytic activity;GO:0016491//oxidoreductase activity	GO:0045892//negative regulation of transcription, DNA-templated;GO:0055114//oxidation-reduction process	K03809//NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]	gi|970005188|ref|XP_015063427.1|//PREDICTED: probable NAD(P)H dehydrogenase (quinone) FQR1-like 1 [Solanum pennellii]
Solyc02g092620.3.1	5092	1183.06917028498	432.923279486757	-1.45035114045928	0.00870920693727323	Down	0.00249933592552805	NA	GO:0060089//molecular transducer activity	GO:0009314//response to radiation;GO:0023052//signaling	K15095//(+)-neomenthol dehydrogenase [EC:1.1.1.208]	gi|971537161|ref|XP_015168353.1|//PREDICTED: LOW QUALITY PROTEIN: BTB/POZ domain-containing protein At5g67385 [Solanum tuberosum]
Solyc01g102640.2.1	2200	18.310134637236	1.79792607522061	-3.34823679120134	0.00181384156384876	Down	0.000429188394487547	NA	NA	NA	K14297//nuclear pore complex protein Nup98-Nup96	gi|698533464|ref|XP_009763547.1|//PREDICTED: flocculation protein FLO11-like isoform X1 [Nicotiana sylvestris];gi|565345723|ref|XP_006339940.1|//PREDICTED: nuclear pore complex protein NUP98A-like [Solanum tuberosum]
Solyc02g061990.3.1	1112	132.612001696336	7.70821186115657	-4.10467131357936	5.88650539159566e-16	Down	1.70706023358484e-17	NA	GO:0043565//sequence-specific DNA binding;GO:0003700//transcription factor activity, sequence-specific DNA binding	GO:0006355//regulation of transcription, DNA-templated	K14432//ABA responsive element binding factor	gi|723677884|ref|XP_010317247.1|//PREDICTED: protein FD-like [Solanum lycopersicum]
Solyc05g007150.3.1	1222	364.07215006907	4080.43972567953	3.48642834133744	3.28456701562881e-34	Up	1.67729864746215e-36	GO:0031224//intrinsic component of membrane	NA	GO:0006810//transport	K15275//solute carrier family 35 (UDP-galactose transporter), member B1	gi|48209877|gb|AAT40483.1|//putative UDP-galactose transporter [Solanum demissum];gi|565395229|ref|XP_006363246.1|//PREDICTED: UDP-galactose/UDP-glucose transporter 3 [Solanum tuberosum];gi|460386179|ref|XP_004238777.1|//PREDICTED: UDP-galactose/UDP-glucose transporter 3-like [Solanum lycopersicum]
Solyc05g053940.3.1	2330	972.355175765224	2198.93741824202	1.17725125191969	0.00115553186351789	Up	0.000260584753775281	NA	GO:0032561//guanyl ribonucleotide binding	GO:0006810//transport;GO:0035556//intracellular signal transduction	K07874//Ras-related protein Rab-1A	gi|460388366|ref|XP_004239838.1|//PREDICTED: ras-related protein RABD2a [Solanum lycopersicum]
Solyc03g083180.1.1	1249	4.72983590219085	24.1239787586146	2.35060583359019	0.00938225968694164	Up	0.00272281571825729	NA	NA	NA	NA	gi|971556031|ref|XP_015165594.1|//PREDICTED: uncharacterized protein LOC102601834 [Solanum tuberosum]
Solyc04g071630.3.1	1020	99.0920703162387	218.586033894989	1.14135970813225	0.00175664236906034	Up	0.000413755148728652	NA	NA	NA	NA	gi|723693908|ref|XP_010320097.1|//PREDICTED: uncharacterized protein At4g08330, chloroplastic-like [Solanum lycopersicum]
Solyc05g007010.2.1	2165	229.702956573829	15.9816834226891	-3.8452781392359	4.36082365421854e-06	Down	5.74117681031008e-07	NA	NA	NA	K20929	gi|460387424|ref|XP_004239377.1|//PREDICTED: galactose oxidase-like [Solanum lycopersicum]
Solyc03g114660.1.1	2661	360.1071429202	170.973130931702	-1.07465659845741	0.0416751365365706	Down	0.0150868095289688	NA	NA	NA	K01176//alpha-amylase [EC:3.2.1.1];K17710//pentatricopeptide repeat domain-containing protein 1	gi|723687213|ref|XP_010318894.1|//PREDICTED: pentatricopeptide repeat-containing protein At1g18485 [Solanum lycopersicum]
Solyc06g071070.1.1	786	822.030205275953	6483.77212158553	2.97957007541026	1.26491275981043e-08	Up	1.06085198657129e-09	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K00059//3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]	gi|460391916|ref|XP_004241564.1|//PREDICTED: short-chain type dehydrogenase/reductase-like [Solanum lycopersicum]
Solyc05g005210.3.1	1894	425.888769080873	929.988322993939	1.12673591600794	5.41075883047282e-05	Up	8.93255213216196e-06	GO:0005634//nucleus	GO:0046872//metal ion binding;GO:0008270//zinc ion binding;GO:0004842//ubiquitin-protein transferase activity	GO:0016567//protein ubiquitination;GO:0031347//regulation of defense response	K19042//E3 ubiquitin-protein ligase BOI and related proteins [EC:2.3.2.27]	gi|460385932|ref|XP_004238654.1|//PREDICTED: E3 ubiquitin-protein ligase BOI [Solanum lycopersicum]
Solyc10g083350.2.1	2258	1022.01509865129	480.169714866502	-1.08980019168121	0.0182720530211477	Down	0.00579395985727237	NA	NA	NA	K13201//nucleolysin TIA-1/TIAR	gi|723739105|ref|XP_010312233.1|//PREDICTED: heme-binding-like protein At3g10130, chloroplastic [Solanum lycopersicum];gi|970054724|ref|XP_015089003.1|//PREDICTED: heme-binding-like protein At3g10130, chloroplastic isoform X1 [Solanum pennellii];gi|970054726|ref|XP_015089004.1|//PREDICTED: heme-binding-like protein At3g10130, chloroplastic isoform X2 [Solanum pennellii]
Solyc08g082010.3.1	4503	1351.49343214609	499.154314998038	-1.43699669785226	0.0028301474710071	Down	0.000704688575604869	NA	NA	NA	K20478//golgin subfamily B member 1	gi|460401174|ref|XP_004246103.1|//PREDICTED: myosin-4-like [Solanum lycopersicum]
Solyc03g080060.1.1	1926	756.087686755646	110.719639420456	-2.77164241004179	6.47777887285887e-07	Down	7.28472448912152e-08	NA	GO:0016301//kinase activity;GO:0005488//binding	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460378557|ref|XP_004235037.1|//PREDICTED: L-type lectin-domain containing receptor kinase VIII.2-like [Solanum lycopersicum]
Solyc09g075710.1.1	984	135.097154723697	4.55113248772052	-4.89162789509156	4.04212475737385e-10	Down	2.69000424037111e-11	NA	NA	NA	K13258//2-hydroxyisoflavanone dehydratase [EC:4.2.1.105]	gi|460403804|ref|XP_004247376.1|//PREDICTED: 2-hydroxyisoflavanone dehydratase-like [Solanum lycopersicum]
Solyc11g069270.2.1	3141	4233.11109665671	417.335243160034	-3.34243968854163	2.64307090080133e-33	Down	1.47778677173177e-35	GO:0005618//cell wall;GO:0016021//integral component of membrane;GO:0005773//vacuole	GO:0030246//carbohydrate binding;GO:0004565//beta-galactosidase activity;GO:0015925//galactosidase activity;GO:0043167//ion binding	GO:0044238//primary metabolic process;GO:0005975//carbohydrate metabolic process	K12309//beta-galactosidase [EC:3.2.1.23]	gi|926234408|ref|NP_001234312.2|//TBG5 protein [Solanum lycopersicum]
Solyc09g064240.3.1	1712	916.271238542861	347.486635068225	-1.39881724394352	7.51737838306786e-05	Down	1.27493930382283e-05	NA	NA	NA	K00852//ribokinase [EC:2.7.1.15];K17275//plastin-1;K01177//beta-amylase [EC:3.2.1.2]	gi|460403281|ref|XP_004247121.1|//PREDICTED: ribokinase [Solanum lycopersicum]
Solyc08g028690.3.1	1146	656.493833722993	192.700851652451	-1.76841851259884	2.84624489735788e-05	Down	4.44314657452468e-06	NA	NA	NA	K09841//xanthoxin dehydrogenase [EC:1.1.1.288]	gi|460398691|ref|XP_004244887.1|//PREDICTED: secoisolariciresinol dehydrogenase-like isoform X1 [Solanum lycopersicum];gi|723721689|ref|XP_010324818.1|//PREDICTED: secoisolariciresinol dehydrogenase-like isoform X2 [Solanum lycopersicum]
Solyc03g121340.1.1	261	26.7545367745803	603.195331040344	4.49476980605732	1.17788481651214e-07	Up	1.1630449079099e-08	NA	NA	NA	NA	gi|223544792|gb|EEF46307.1|//conserved hypothetical protein [Ricinus communis]
Solyc07g007140.3.1	6486	3164.87975675888	27478.5978441701	3.11808579583893	9.16807317076927e-11	Up	5.49852010279102e-12	NA	NA	NA	K04424//sterile alpha motif and leucine zipper containing kinase AZK [EC:2.7.11.25];K14510//serine/threonine-protein kinase CTR1 [EC:2.7.11.1];K04422//mitogen-activated protein kinase kinase kinase 13 [EC:2.7.11.25]	gi|460394889|ref|XP_004243022.1|//PREDICTED: uncharacterized protein LOC101257085 [Solanum lycopersicum]
Solyc11g069710.2.1	2842	269.292347372052	110.961691113602	-1.2791115522071	0.00940998982237638	Down	0.00273306398896514	GO:0044464//cell part;GO:0016021//integral component of membrane;GO:0005886//plasma membrane	GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity;GO:0042626//ATPase activity, coupled to transmembrane movement of substances	GO:0055085//transmembrane transport;GO:0009207//purine ribonucleoside triphosphate catabolic process	K05681//ATP-binding cassette, subfamily G (WHITE), member 2	gi|460411518|ref|XP_004251157.1|//PREDICTED: ABC transporter G family member 3 [Solanum lycopersicum];gi|970059817|ref|XP_015056662.1|//PREDICTED: ABC transporter G family member 3 [Solanum pennellii]
Solyc01g094960.3.1	3651	548.460553955325	2815.2919182022	2.35982475456792	6.21203807492454e-07	Up	6.96272494829957e-08	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004702//receptor signaling protein serine/threonine kinase activity	GO:0006464//cellular protein modification process	K20600	gi|936976504|ref|NP_001234266.2|//mitogen-activated protein kinase 5 [Solanum lycopersicum]
Solyc01g100930.3.1	3123	499.380228077735	34.9223704593746	-3.83791530728061	3.03258439464057e-11	Down	1.69557052033728e-12	NA	GO:0016787//hydrolase activity	GO:0044238//primary metabolic process	K10396//kinesin family member 5;K01206//alpha-L-fucosidase [EC:3.2.1.51]	gi|460368967|ref|XP_004230336.1|//PREDICTED: GDSL esterase/lipase At1g09390 [Solanum lycopersicum]
Solyc06g070990.3.1	2282	3.50398170630452	443.806629766731	6.98479216615289	5.30580172659808e-23	Up	7.33730595112527e-25	NA	NA	NA	K18835//WRKY transcription factor 2;K13424//WRKY transcription factor 33;K18834//WRKY transcription factor 1	gi|971563510|ref|XP_015167519.1|//PREDICTED: probable WRKY transcription factor 61 isoform X1 [Solanum tuberosum]
Solyc03g007010.3.1	2342	770.766881770146	329.83445061531	-1.22455248984904	0.035520080475735	Down	0.0125130565296023	NA	NA	NA	K16911//ATP-dependent RNA helicase DDX21 [EC:3.6.4.13]	gi|460376730|ref|XP_004234150.1|//PREDICTED: DEAD-box ATP-dependent RNA helicase 7-like [Solanum lycopersicum]
Solyc08g013850.1.1	3379	205.035196877891	30.0243629158854	-2.7716660488332	2.75016552842126e-09	Down	2.0860991689046e-10	NA	NA	GO:0016556//mRNA modification	K01176//alpha-amylase [EC:3.2.1.1];K19589//release factor glutamine methyltransferase [EC:2.1.1.297]	gi|460398543|ref|XP_004244817.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g55740, chloroplastic [Solanum lycopersicum]
Solyc01g008510.3.1	348	56.7124853942903	6.79020719945246	-3.06213887972192	0.00448274418047629	Down	0.00118317845318147	NA	NA	NA	NA	gi|460366017|ref|XP_004228890.1|//PREDICTED: photosystem II 5 kDa protein, chloroplastic-like [Solanum lycopersicum]
Solyc01g100240.3.1	2802	428.867256955452	1304.5400436658	1.60493815046514	0.00226613970440241	Up	0.000548276580884226	GO:0005634//nucleus	GO:0043565//sequence-specific DNA binding;GO:0005516//calmodulin binding;GO:0003700//transcription factor activity, sequence-specific DNA binding	GO:0009789//positive regulation of abscisic acid-activated signaling pathway;GO:0006355//regulation of transcription, DNA-templated;GO:1902584//positive regulation of response to water deprivation;GO:0010224//response to UV-B;GO:0002229//defense response to oomycetes;GO:0009816//defense response to bacterium, incompatible interaction;GO:0071219//cellular response to molecule of bacterial origin;GO:0010112//regulation of systemic acquired resistance;GO:0080142//regulation of salicylic acid biosynthetic process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460368863|ref|XP_004230284.1|//PREDICTED: uncharacterized protein LOC101267354 [Solanum lycopersicum]
Solyc08g078480.3.1	736	334.392047760374	743.393917702994	1.15258634558515	0.000590531534624368	Up	0.000124124322489444	NA	NA	NA	NA	gi|970045981|ref|XP_015084482.1|//PREDICTED: uncharacterized protein LOC107027941 isoform X2 [Solanum pennellii]
BGI_novel_G000253	2385	210.146930198095	69.265913754837	-1.60118091023119	0.00116365577613771	Down	0.00026254690670052	NA	NA	NA	NA	NA
Solyc09g009180.3.1	2663	545.067690110872	1152.6500497561	1.0804472605922	0.000191734986004631	Up	3.59342295225617e-05	NA	NA	NA	K09540//translocation protein SEC63	gi|460402120|ref|XP_004246562.1|//PREDICTED: dnaJ protein ERDJ2A-like [Solanum lycopersicum]
Solyc03g034220.3.1	871	240851.924648373	42344.816102777	-2.50788918332534	5.32058406961397e-18	Down	1.21769741268189e-19	GO:0009536//plastid;GO:0009507//chloroplast	GO:0016831//carboxy-lyase activity;GO:0004497//monooxygenase activity;GO:0005488//binding;GO:0016491//oxidoreductase activity;GO:0016984//ribulose-bisphosphate carboxylase activity	GO:0015977//carbon fixation;GO:0019253//reductive pentose-phosphate cycle;GO:0009853//photorespiration;GO:0043094//cellular metabolic compound salvage;GO:0055114//oxidation-reduction process	K01602//ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]	gi|822092470|ref|NP_001295873.1|//ribulose bisphosphate carboxylase small chain 2A, chloroplastic [Solanum lycopersicum]
Solyc05g049970.3.1	2089	965.41334784338	466.652001955766	-1.04879968885328	0.0029900935968617	Down	0.000749641029241532	GO:0005622//intracellular	GO:0005524//ATP binding;GO:0004707//MAP kinase activity	GO:0000165//MAPK cascade	K04371//mitogen-activated protein kinase 1/3 [EC:2.7.11.24];K20600	gi|350539489|ref|NP_001234660.1|//mitogen-activated protein kinase 6 [Solanum lycopersicum];gi|972780605|ref|NP_001305496.1|//mitogen-activated protein kinase homolog MMK2-like [Solanum tuberosum]
Solyc04g049840.3.1	3084	637.279487011761	117.512642066545	-2.43911025252921	8.06388672989161e-06	Down	1.13017049740541e-06	NA	NA	NA	K10643//CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]	gi|723692725|ref|XP_010319845.1|//PREDICTED: uncharacterized protein LOC101251877 isoform X4 [Solanum lycopersicum];gi|723692722|ref|XP_010319844.1|//PREDICTED: uncharacterized protein LOC101251877 isoform X3 [Solanum lycopersicum]
Solyc12g062870.2.1	2015	2914.26904656548	5876.94268884335	1.01193175565233	0.000316480402872073	Up	6.21950743777916e-05	NA	GO:0004674//protein serine/threonine kinase activity;GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process;GO:0006468//protein phosphorylation	K03083//glycogen synthase kinase 3 beta [EC:2.7.11.26]	gi|565396814|ref|XP_006364003.1|//PREDICTED: shaggy-related protein kinase epsilon [Solanum tuberosum];gi|460414611|ref|XP_004252661.1|//PREDICTED: shaggy-related protein kinase epsilon isoform X1 [Solanum lycopersicum]
Solyc03g112100.3.1	697	4.17120249421287	28.8769140673901	2.79138132102434	0.00294163744807941	Up	0.000735738306120949	NA	NA	NA	K01517//manganese-dependent ADP-ribose/CDP-alcohol diphosphatase [EC:3.6.1.13 3.6.1.16 3.6.1.53]	gi|723688012|ref|XP_010319027.1|//PREDICTED: high-affinity nitrate transporter 3.2-like [Solanum lycopersicum]
Solyc03g120890.3.1	2152	329.397794109528	81.7225904447938	-2.01102405325358	0.00284595074149426	Down	0.000708941732719777	NA	NA	NA	K19027//zinc finger FYVE domain-containing protein 26;K17895//GATA-binding protein 3	gi|971542834|ref|XP_006343049.2|//PREDICTED: GATA transcription factor 12-like [Solanum tuberosum]
Solyc08g081730.3.1	3631	2143.2166700722	4859.19488757298	1.18093958803106	0.00630197053138433	Up	0.0017380453243519	GO:0043231//intracellular membrane-bounded organelle	NA	NA	K20721	gi|460400073|ref|XP_004245560.1|//PREDICTED: reticulon-like protein B4 [Solanum lycopersicum]
Solyc02g011820.2.1	759	1113.3177019875	371.861627038983	-1.58202755933815	0.0220459766084381	Down	0.00721252186865444	GO:0016020//membrane;GO:0009507//chloroplast	NA	NA	NA	gi|544163672|ref|YP_008563147.1|//hypothetical chloroplast RF1 (chloroplast) [Solanum lycopersicum]
Solyc03g096380.3.1	1866	1122.57069753522	379.222608909719	-1.56568942214364	9.82607499954439e-05	Down	1.7111757267732e-05	GO:0031224//intrinsic component of membrane;GO:0016021//integral component of membrane;GO:0005886//plasma membrane	GO:0015171//amino acid transmembrane transporter activity	GO:0003333//amino acid transmembrane transport	K14209//solute carrier family 36 (proton-coupled amino acid transporter);K15015//solute carrier family 32 (vesicular inhibitory amino acid transporter)	gi|723682937|ref|XP_010318150.1|//PREDICTED: proline transporter 2 isoform X1 [Solanum lycopersicum];gi|970027149|ref|XP_015074883.1|//PREDICTED: proline transporter 2-like [Solanum pennellii];gi|723682940|ref|XP_010318151.1|//PREDICTED: proline transporter 2 isoform X2 [Solanum lycopersicum];gi|723701976|ref|XP_004239926.2|//PREDICTED: proline transporter 2-like [Solanum lycopersicum];gi|350536429|ref|NP_001233990.1|//proline transporter 2 [Solanum lycopersicum]
Solyc02g069520.2.1	909	59.7653265412039	137.795488327649	1.20514801426791	0.00348906294150747	Up	0.000892163850407829	NA	NA	NA	NA	gi|970006287|ref|XP_015063996.1|//PREDICTED: mediator of RNA polymerase II transcription subunit 9 [Solanum pennellii]
Solyc04g009000.1.1	2130	21.5926136215514	67.0506220116774	1.63471283452397	0.00137874540227018	Up	0.000316112381443413	NA	NA	NA	K15271//ATP-dependent DNA helicase HFM1/MER3 [EC:3.6.4.12];K19589//release factor glutamine methyltransferase [EC:2.1.1.297]	gi|460382901|ref|XP_004237174.1|//PREDICTED: pentatricopeptide repeat-containing protein At2g13600 [Solanum lycopersicum]
Solyc09g065890.3.1	1475	195.178992591208	3828.92053963363	4.29406803377858	6.18709542765894e-24	Up	7.70273547352798e-26	NA	NA	NA	K16818//phospholipase A1 [EC:3.1.1.32]	gi|723731079|ref|XP_010326538.1|//PREDICTED: LOW QUALITY PROTEIN: phospholipase A1-Igamma2, chloroplastic-like [Solanum lycopersicum]
Solyc06g050630.3.1	2142	226.128225454776	877.419609058594	1.95612586751252	6.31433724458413e-05	Up	1.05937199708786e-05	NA	GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	GO:0006570//tyrosine metabolic process	K15227//arogenate dehydrogenase (NADP+), plant [EC:1.3.1.78]	gi|460390550|ref|XP_004240892.1|//PREDICTED: arogenate dehydrogenase 1, chloroplastic-like [Solanum lycopersicum]
Solyc10g044840.2.1	1431	1557.87687054522	180.743209699076	-3.10756785902081	9.10616865538976e-30	Down	6.78855572937958e-32	NA	NA	NA	K06962//uncharacterized protein	gi|460406781|ref|XP_004248838.1|//PREDICTED: uncharacterized protein LOC101259090 isoform X1 [Solanum lycopersicum]
Solyc02g084120.2.1	3362	140.203326880711	655.957132737167	2.22608095335817	9.9122984613692e-06	Up	1.40807251514381e-06	NA	NA	NA	K08739//DNA mismatch repair protein MLH3;K05658//ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:3.6.3.44];K03544//ATP-dependent Clp protease ATP-binding subunit ClpX	gi|971582564|ref|XP_006365142.2|//PREDICTED: uncharacterized protein LOC102600784 [Solanum tuberosum];gi|723672593|ref|XP_010316416.1|//PREDICTED: uncharacterized protein LOC104645754 isoform X2 [Solanum lycopersicum]
Solyc06g009480.2.1	1188	1.15378316488544	62.296290230509	5.75470222964529	5.94827602716608e-09	Up	4.76030588576322e-10	GO:0043231//intracellular membrane-bounded organelle	GO:0003676//nucleic acid binding	NA	K09422//myb proto-oncogene protein, plant	gi|970033730|ref|XP_015078167.1|//PREDICTED: transcription factor MYB108-like [Solanum pennellii];gi|723704788|ref|XP_004240646.2|//PREDICTED: transcription factor MYB108-like [Solanum lycopersicum]
Solyc12g010420.1.1	171	32.0179268348514	204.698245635607	2.67654693652054	0.00897485662607392	Up	0.00258560708449848	NA	NA	NA	NA	gi|723748185|ref|XP_010313841.1|//PREDICTED: uncharacterized protein LOC104644843 [Solanum lycopersicum]
Solyc03g097170.3.1	1643	343.356686245884	849.196719535726	1.30639074034795	0.0313340698646741	Up	0.0108503618996132	NA	GO:0016616//oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	GO:0008152//metabolic process	K09753//cinnamoyl-CoA reductase [EC:1.2.1.44]	gi|460379158|ref|XP_004235331.1|//PREDICTED: cinnamoyl-CoA reductase 1-like [Solanum lycopersicum]
Solyc11g012130.2.1	875	2366.70140242992	169.109466876377	-3.80684836801055	3.8743048056803e-06	Down	5.06888693452283e-07	NA	NA	NA	K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]	gi|460409660|ref|XP_004250256.1|//PREDICTED: early nodulin-like protein 1 [Solanum lycopersicum]
Solyc11g009070.2.1	1538	994.957436659272	118.20230134558	-3.07337668543153	1.45328571679918e-16	Down	3.93277706275608e-18	NA	NA	NA	K16055//trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12]	gi|723741498|ref|XP_010312631.1|//PREDICTED: uncharacterized protein LOC101259600 [Solanum lycopersicum]
Solyc01g106947.1.1	3260	37.5246609070077	14.2814733724435	-1.39369420980954	0.032459501969222	Down	0.011292102723973	NA	NA	NA	NA	gi|641838971|gb|KDO57907.1|//hypothetical protein CISIN_1g034550mg [Citrus sinensis]
Solyc11g032220.2.1	1042	10.7256941172278	1.16640458738515	-3.20093081136773	0.0273268043469079	Down	0.00924984010266402	GO:0005622//intracellular	GO:0010181//FMN binding;GO:0003959//NADPH dehydrogenase activity	GO:0055114//oxidation-reduction process	K05894//12-oxophytodienoic acid reductase [EC:1.3.1.42]	gi|565344474|ref|XP_006339340.1|//PREDICTED: 12-oxophytodienoate reductase 1-like [Solanum tuberosum]
Solyc06g076590.3.1	2897	530.632713122024	1115.90716552604	1.07243148704609	0.0228757757157053	Up	0.00752748427084561	NA	NA	NA	NA	gi|723707048|ref|XP_010322335.1|//PREDICTED: uncharacterized protein LOC101263914 isoform X1 [Solanum lycopersicum];gi|460391160|ref|XP_004241191.1|//PREDICTED: uncharacterized protein LOC101263914 isoform X2 [Solanum lycopersicum]
Solyc08g062490.3.1	1076	265.592939045948	1020.1649305184	1.94151371484311	0.0101151510189527	Up	0.00296275744397385	NA	NA	NA	K10268//F-box and leucine-rich repeat protein 2/20;K13424//WRKY transcription factor 33;K18834//WRKY transcription factor 1	gi|460399068|ref|XP_004245065.1|//PREDICTED: probable WRKY transcription factor 75 [Solanum lycopersicum]
Solyc10g085900.2.1	1229	290.170961608196	102.04463795983	-1.50770277477323	0.00406009708552533	Down	0.00105830695240341	NA	NA	NA	K02918//large subunit ribosomal protein L35e	gi|970058670|ref|XP_015056044.1|//PREDICTED: LOW QUALITY PROTEIN: protein SLOW GREEN 1, chloroplastic [Solanum pennellii]
Solyc09g005620.3.1	1089	2454.14348422519	1160.20134150663	-1.08084440765179	0.000734121258991082	Down	0.000157835523403182	NA	GO:0015036//disulfide oxidoreductase activity	GO:0019725//cellular homeostasis	K07390//monothiol glutaredoxin	gi|937500783|ref|NP_001234270.2|//GRX1 protein [Solanum lycopersicum]
Solyc05g052420.2.1	681	0.390197826212989	14.8033269268153	5.24557189526155	0.000255136879047604	Up	4.91006301820032e-05	NA	NA	NA	K14496//abscisic acid receptor PYR/PYL family	gi|460388600|ref|XP_004239955.1|//PREDICTED: abscisic acid receptor PYL4-like [Solanum lycopersicum]
Solyc07g005200.3.1	1025	1286.63944645405	3742.65490714797	1.54045420478922	1.03730019588267e-05	Up	1.47854329396725e-06	GO:0031224//intrinsic component of membrane	NA	GO:0006810//transport	K08516//synaptobrevin homolog YKT6	gi|460393945|ref|XP_004242568.1|//PREDICTED: VAMP-like protein YKT61 [Solanum lycopersicum]
Solyc06g053640.1.1	855	39.9829890207281	209.613092140578	2.39027059517608	1.22542267403769e-06	Up	1.4666886112774e-07	NA	NA	NA	K19041//E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27]	gi|460390799|ref|XP_004241012.1|//PREDICTED: RING-H2 finger protein ATL16-like [Solanum lycopersicum]
Solyc06g061215.1.1	582	9.50893508721145	1645.27185783768	7.43482649158159	2.61453762084949e-24	Up	3.17705108243974e-26	NA	GO:0030414//peptidase inhibitor activity	NA	NA	gi|460392717|ref|XP_004241960.1|//PREDICTED: proteinase inhibitor PSI-1.2 [Solanum lycopersicum]
Solyc02g064710.3.1	1566	45.3584688478755	113.671145269166	1.32542223572284	0.000233251260656491	Up	4.44279835229859e-05	NA	NA	NA	NA	gi|460375319|ref|XP_004233454.1|//PREDICTED: uncharacterized protein LOC101245817 [Solanum lycopersicum]
Solyc01g095810.3.1	3366	259.464554700549	112.945273757979	-1.19991356450782	0.0263570519329672	Down	0.00887639645945874	NA	NA	NA	K10268//F-box and leucine-rich repeat protein 2/20;K19041//E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27]	gi|723661545|ref|XP_010327016.1|//PREDICTED: putative RING-H2 finger protein ATL21A [Solanum lycopersicum];gi|723661548|ref|XP_010327021.1|//PREDICTED: F-box protein At5g51380-like [Solanum lycopersicum]
Solyc07g054980.2.1	1641	0.432803066257247	22.645552016909	5.70937317710777	3.91442634491203e-05	Up	6.27697261659892e-06	NA	NA	NA	K09422//myb proto-oncogene protein, plant	gi|970040313|ref|XP_015081535.1|//PREDICTED: myb-related protein Myb4-like [Solanum pennellii]
Solyc11g008040.2.1	4297	386.012941116138	94.3325077819337	-2.03282228813744	1.09938361644079e-08	Down	9.14240662099077e-10	NA	GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0043167//ion binding	GO:0044238//primary metabolic process	K01214//isoamylase [EC:3.2.1.68]	gi|460409210|ref|XP_004250032.1|//PREDICTED: pullulanase 1, chloroplastic [Solanum lycopersicum];gi|971576175|ref|XP_015170912.1|//PREDICTED: pullulanase 1, chloroplastic isoform X2 [Solanum tuberosum]
Solyc05g054795.1.1	582	3.15337177429685	24.0601951809785	2.93168117084513	0.00232364837403564	Up	0.000564109209038843	NA	NA	NA	NA	gi|723701385|ref|XP_010321367.1|//PREDICTED: dirigent protein 18-like [Solanum lycopersicum]
Solyc09g010120.2.1	901	1375.3944781406	198.296202218328	-2.79411650630785	4.85029747884613e-07	Down	5.33447918157232e-08	NA	NA	NA	NA	gi|460401970|ref|XP_004246488.1|//PREDICTED: uncharacterized protein LOC101246952 [Solanum lycopersicum]
Solyc00g007100.3.1	3942	367.888384725882	1069.28895005867	1.53931172777871	0.000318214538272653	Up	6.25919978554044e-05	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process	K08832//serine/threonine-protein kinase SRPK3 [EC:2.7.11.1]	gi|460415799|ref|XP_004253241.1|//PREDICTED: SRSF protein kinase 1 [Solanum lycopersicum]
Solyc01g099030.3.1	4506	398.362517219418	59.6512646881004	-2.73945727707408	3.28122311473237e-05	Down	5.20533978541112e-06	NA	NA	NA	K21026;K01206//alpha-L-fucosidase [EC:3.2.1.51]	gi|460368690|ref|XP_004230198.1|//PREDICTED: GDSL esterase/lipase At5g03980 [Solanum lycopersicum];gi|10764854|gb|AAF24544.2|AC007508_7//F1K23.13 [Arabidopsis thaliana]
Solyc04g008840.3.1	2753	682.471610796552	168.563068804024	-2.01748054984176	1.38276013250915e-06	Down	1.66788869419994e-07	NA	NA	NA	K12619//5'-3' exoribonuclease 2 [EC:3.1.13.-];K10352//myosin heavy chain;K20553;K06041//arabinose-5-phosphate isomerase [EC:5.3.1.13]	gi|460382281|ref|XP_004236868.1|//PREDICTED: FRIGIDA-like protein 3 [Solanum lycopersicum]
Solyc09g009940.3.1	2059	6140.11325191645	2922.38561738275	-1.07111870721116	4.93522461148449e-05	Down	8.05735939999331e-06	GO:0030529//intracellular ribonucleoprotein complex	GO:0003723//RNA binding;GO:0016462//pyrophosphatase activity;GO:0032561//guanyl ribonucleotide binding	GO:0006613//cotranslational protein targeting to membrane	K03106//signal recognition particle subunit SRP54 [EC:3.6.5.4]	gi|460402000|ref|XP_004246503.1|//PREDICTED: signal recognition particle 54 kDa protein, chloroplastic [Solanum lycopersicum];gi|970052769|ref|XP_015088003.1|//PREDICTED: signal recognition particle 54 kDa protein, chloroplastic [Solanum pennellii]
Solyc06g048950.3.1	3488	741.267287203012	250.843211731276	-1.56320794864699	0.0377651749397194	Down	0.013439098149303	NA	GO:0016740//transferase activity	NA	K20718;K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|460390483|ref|XP_004240861.1|//PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 [Solanum lycopersicum]
Solyc05g051460.3.1	1680	405.219365270021	1038.38740322598	1.35756976037505	0.00942823326417793	Up	0.00273871409824581	NA	NA	NA	K09338//homeobox-leucine zipper protein	gi|460388744|ref|XP_004240025.1|//PREDICTED: homeobox-leucine zipper protein ATHB-6 [Solanum lycopersicum]
Solyc06g076670.3.1	7143	907.832048512848	2546.16723119059	1.48782985328666	0.00150097814405456	Up	0.000347606128261927	NA	GO:0005488//binding	NA	K17362//acyl-coenzyme A thioesterase 13 [EC:3.1.2.-];K12897//transformer-2 protein	gi|460391142|ref|XP_004241182.1|//PREDICTED: serine/arginine-rich splicing factor SR45a [Solanum lycopersicum]
Solyc07g007400.3.1	1353	27.1555469030352	2.27912242135424	-3.57469659383759	0.0436811663919279	Down	0.0159546648827532	NA	NA	NA	NA	gi|723712626|ref|XP_010323274.1|//PREDICTED: F-box/LRR-repeat protein 14-like isoform X3 [Solanum lycopersicum]
Solyc01g006130.3.1	1126	3452.22583368602	606.027888794463	-2.51007075243203	5.93721505423628e-17	Down	1.52922901538589e-18	NA	GO:0005515//protein binding	GO:0044267//cellular protein metabolic process	K12603//CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]	gi|460365607|ref|XP_004228692.1|//PREDICTED: uncharacterized protein LOC101267437 [Solanum lycopersicum]
Solyc02g005210.3.1	1180	4709.75042294384	920.754100163804	-2.35476278954763	7.81725566099802e-20	Down	1.49188716953593e-21	NA	NA	NA	NA	gi|723667244|ref|XP_010315530.1|//PREDICTED: uncharacterized protein LOC101248341 [Solanum lycopersicum]
Solyc06g024230.1.1	286	1131.87785047154	6955.8337928437	2.61950518597531	0.0181645263476799	Up	0.00575715549181162	NA	NA	NA	NA	gi|922326251|ref|XP_013442518.1|//senescence-associated protein, putative, partial [Medicago truncatula];gi|922327209|ref|XP_013442997.1|//senescence-associated protein, putative [Medicago truncatula]
Solyc06g073980.3.1	2176	217.716047984239	50.2845362966988	-2.11426104343377	0.000179070889896803	Down	3.33071321225975e-05	GO:0005634//nucleus	GO:0003677//DNA binding	GO:0006355//regulation of transcription, DNA-templated	NA	gi|460391477|ref|XP_004241347.1|//PREDICTED: B3 domain-containing protein REM5-like isoform X1 [Solanum lycopersicum]
Solyc02g081030.3.1	3219	2772.38583722445	28705.858792902	3.37214525868791	1.46710922267722e-13	Up	5.78028346641504e-15	GO:0044464//cell part	NA	NA	K03021//DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6];K15601//lysine-specific demethylase 3 [EC:1.14.11.-]	gi|697130890|ref|XP_009619499.1|//PREDICTED: calcium permeable stress-gated cation channel 1-like [Nicotiana tomentosiformis];gi|460373769|ref|XP_004232686.1|//PREDICTED: calcium permeable stress-gated cation channel 1-like [Solanum lycopersicum]
Solyc02g092570.1.1	1317	128.848314578049	12.0498197568328	-3.41859019424514	0.00057494605566128	Down	0.00012046264271925	NA	NA	NA	K14494//DELLA protein	gi|460372179|ref|XP_004231909.1|//PREDICTED: scarecrow-like protein 32 [Solanum lycopersicum]
Solyc08g069100.1.1	2013	304.648255880193	128.671855562781	-1.24344795400435	0.0434339662003459	Down	0.0158562794455862	GO:0043234//protein complex	NA	GO:0016192//vesicle-mediated transport	K07195//exocyst complex component 7	gi|723723308|ref|XP_010325191.1|//PREDICTED: exocyst complex component EXO70A1-like [Solanum lycopersicum]
Solyc11g071500.2.1	3136	162.264680668258	36.0054869764925	-2.17206032519055	1.47805483453273e-07	Down	1.48312345853664e-08	NA	NA	NA	K01179//endoglucanase [EC:3.2.1.4];K08869//aarF domain-containing kinase;K17613//calcineurin-binding protein cabin-1	gi|460412074|ref|XP_004251428.1|//PREDICTED: uncharacterized protein LOC101258332 [Solanum lycopersicum]
Solyc01g006780.3.1	620	48.7330571683483	2.47800317025553	-4.2976507915652	6.1634000491067e-05	Down	1.03155141963639e-05	NA	NA	NA	NA	NA
Solyc05g052070.3.1	1549	598.699242194535	1225.64526268028	1.0336381323585	9.50732024989222e-05	Up	1.65212192504091e-05	GO:0005622//intracellular	GO:0032561//guanyl ribonucleotide binding;GO:0003824//catalytic activity;GO:0005525//GTP binding	GO:0006810//transport;GO:0007264//small GTPase mediated signal transduction;GO:0035556//intracellular signal transduction	K07874//Ras-related protein Rab-1A	gi|350538481|ref|NP_001233833.1|//small GTP-binding protein [Solanum lycopersicum]
Solyc07g006670.1.1	1386	42.4782544501497	15.6468116242937	-1.44085577615877	0.0260583335956332	Down	0.00875928329973984	NA	NA	NA	K13065//shikimate O-hydroxycinnamoyltransferase [EC:2.3.1.133]	gi|460394866|ref|XP_004243011.1|//PREDICTED: vinorine synthase-like [Solanum lycopersicum]
Solyc07g005720.3.1	498	249.998602607817	637.815351485116	1.35121879120386	0.00016749924058723	Up	3.09924791365369e-05	NA	NA	NA	NA	gi|970042959|ref|XP_015082877.1|//PREDICTED: UPF0057 membrane protein At4g30660-like [Solanum pennellii]
Solyc11g007680.2.1	1353	2265.96265379135	806.733089664871	-1.48996074664765	8.26416055438502e-07	Down	9.49386567340638e-08	NA	NA	NA	NA	gi|970064365|ref|XP_015059141.1|//PREDICTED: uncharacterized protein LOC107005148 [Solanum pennellii]
Solyc03g118090.3.1	3094	210.299196376695	457.988415508823	1.1228677697772	0.000190303817558016	Up	3.56302666653689e-05	NA	NA	NA	K14684//solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41	gi|460380213|ref|XP_004235852.1|//PREDICTED: calcium-binding mitochondrial carrier protein SCaMC-1-like [Solanum lycopersicum];gi|697191528|ref|XP_009604830.1|//PREDICTED: calcium-binding mitochondrial carrier protein SCaMC-2-B-like [Nicotiana tomentosiformis]
Solyc05g054680.1.1	2529	407.555656690562	54.8942969653542	-2.89226891158062	4.45469614679963e-06	Down	5.87306555510298e-07	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723701424|ref|XP_004240198.2|//PREDICTED: receptor-like protein kinase THESEUS 1 [Solanum lycopersicum]
Solyc06g083890.3.1	3808	1359.34533445694	207.796130439781	-2.70967131780285	1.89658218496755e-13	Down	7.61598569986216e-15	NA	NA	NA	K12819//pre-mRNA-processing factor SLU7	gi|460393526|ref|XP_004242360.1|//PREDICTED: pre-mRNA-splicing factor SLU7-like [Solanum lycopersicum];gi|565372315|ref|XP_006352741.1|//PREDICTED: pre-mRNA-splicing factor SLU7-like isoform X1 [Solanum tuberosum]
Solyc06g053180.3.1	1235	837.294054594028	2915.27086496929	1.79982364791536	2.05650739866058e-06	Up	2.56028578780615e-07	NA	NA	NA	K13076//Delta8-fatty-acid desaturase [EC:1.14.19.4];K10534//nitrate reductase (NAD(P)H) [EC:1.7.1.1 1.7.1.2 1.7.1.3]	gi|970035556|ref|XP_015079111.1|//PREDICTED: cytochrome b5 isoform E-like [Solanum pennellii]
Solyc03g083690.1.1	270	0.463492213234479	27.7386934624163	5.90321092427549	1.76942859228344e-05	Up	2.64873461555476e-06	NA	NA	NA	NA	NA
Solyc01g007880.3.1	3879	621.749685785834	176.8113447859	-1.81412302768225	1.54733640952957e-07	Down	1.55841023503388e-08	NA	NA	NA	K03531//cell division protein FtsZ;K00889//1-phosphatidylinositol-4-phosphate 5-kinase [EC:2.7.1.68]	gi|460366036|ref|XP_004228899.1|//PREDICTED: protein ACCUMULATION AND REPLICATION OF CHLOROPLASTS 3 [Solanum lycopersicum]
Solyc03g034380.1.1	303	144.15103090682	8.58581042851643	-4.06948302521494	5.05955989356775e-06	Down	6.78555855712567e-07	NA	NA	NA	NA	gi|723680397|ref|XP_010317725.1|//PREDICTED: non-specific lipid-transfer protein 2-like [Solanum lycopersicum]
Solyc11g069510.2.1	1426	2075.69595325297	499.147814725849	-2.05605611878258	0.000362700245730342	Down	7.21804313386871e-05	NA	NA	NA	K17895//GATA-binding protein 3	gi|460411485|ref|XP_004251141.1|//PREDICTED: GATA transcription factor 11-like [Solanum lycopersicum]
Solyc09g064780.3.1	3357	208.155508208414	1862.59720228591	3.16158207595966	2.23404292143657e-11	Up	1.21940137158421e-12	NA	NA	NA	NA	gi|565378889|ref|XP_006355878.1|//PREDICTED: mediator of RNA polymerase II transcription subunit 33A [Solanum tuberosum];gi|460403326|ref|XP_004247142.1|//PREDICTED: mediator of RNA polymerase II transcription subunit 33A-like isoform X1 [Solanum lycopersicum]
Solyc01g096890.3.1	2078	205.817027135489	585.842662971301	1.50915091821717	5.11562782282474e-07	Up	5.64610630065009e-08	NA	NA	NA	NA	gi|460368416|ref|XP_004230063.1|//PREDICTED: uncharacterized protein LOC101250928 [Solanum lycopersicum]
Solyc04g071680.2.1	2808	4.82442915689684	114.010162372231	4.56266036766139	1.31478619882644e-14	Up	4.48423054989636e-16	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723693943|ref|XP_004238491.2|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Solanum lycopersicum]
Solyc03g120540.3.1	1040	246.588268009224	563.532143847042	1.19239374208581	1.74409938951743e-05	Up	2.60561739719169e-06	NA	NA	NA	NA	gi|460379872|ref|XP_004235684.1|//PREDICTED: uncharacterized protein LOC101267390 [Solanum lycopersicum]
Solyc12g010130.1.1	1299	3547.7351255312	1529.3240156034	-1.21400420108366	3.06588551061954e-05	Down	4.81915878868443e-06	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process;GO:0023052//signaling	K07198//5'-AMP-activated protein kinase, catalytic alpha subunit [EC:2.7.11.11]	gi|928589379|ref|NP_001265891.2|//CBL-interacting protein kinase 6 [Solanum lycopersicum]
Solyc08g079420.3.1	1597	136.649443896525	2565.90764751148	4.23091775184286	2.34701616946671e-08	Up	2.03749838179811e-09	NA	NA	NA	K20770;K20562//null;K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30]	gi|460400391|ref|XP_004245718.1|//PREDICTED: ferruginol synthase-like [Solanum lycopersicum]
Solyc12g062250.2.1	2656	2332.97720074821	790.026386594445	-1.5621994638126	1.44055420528307e-08	Down	1.21674960085412e-09	NA	NA	NA	K14165//atypical dual specificity phosphatase [EC:3.1.3.16 3.1.3.48];K07199//5'-AMP-activated protein kinase, regulatory beta subunit	gi|460414623|ref|XP_004252666.1|//PREDICTED: phosphoglucan phosphatase LSF1, chloroplastic-like isoform X2 [Solanum lycopersicum];gi|723749958|ref|XP_010314533.1|//PREDICTED: phosphoglucan phosphatase LSF1, chloroplastic-like isoform X1 [Solanum lycopersicum]
Solyc06g076120.2.1	639	277.535377963054	19.6190791346238	-3.8223424541295	6.86455975159532e-10	Down	4.74388466507296e-11	NA	NA	NA	K19519//transforming growth factor-beta-induced protein	gi|970037654|ref|XP_015080173.1|//PREDICTED: fasciclin-like arabinogalactan protein 4 [Solanum pennellii]
Solyc04g064740.3.1	2383	260.106684003139	3501.00769551204	3.75059485490051	3.25880006724143e-24	Up	3.98421955440282e-26	NA	NA	NA	K16573//gamma-tubulin complex component 6	gi|460384060|ref|XP_004237733.1|//PREDICTED: protein trichome berefringence-like 7 [Solanum lycopersicum]
Solyc04g082250.3.1	7967	40147.767917879	4558.7184879986	-3.1386195538117	6.21188937633244e-11	Down	3.65378016842575e-12	GO:0031224//intrinsic component of membrane;GO:0009941//chloroplast envelope	GO:0004175//endopeptidase activity;GO:0043169//cation binding;GO:0032559//adenyl ribonucleotide binding;GO:0016462//pyrophosphatase activity	GO:0019538//protein metabolic process;GO:0009987//cellular process;GO:0009057//macromolecule catabolic process	K03798//cell division protease FtsH [EC:3.4.24.-]	gi|902967420|ref|NP_001234196.2|//FtsH-like protein precursor [Solanum lycopersicum]
Solyc11g032133.1.1	3729	52.2790464054586	149.275624043235	1.51367386883325	0.00132703586636709	Up	0.000303069507724435	GO:0005622//intracellular	GO:0010181//FMN binding;GO:0003959//NADPH dehydrogenase activity	GO:0055114//oxidation-reduction process	K05894//12-oxophytodienoic acid reductase [EC:1.3.1.42]	gi|971564890|ref|XP_015167893.1|//PREDICTED: uncharacterized protein LOC107062130 [Solanum tuberosum];gi|460410474|ref|XP_004250653.1|//PREDICTED: 12-oxophytodienoate reductase 1-like isoform X1 [Solanum lycopersicum];gi|723743545|ref|XP_010312987.1|//PREDICTED: putative 12-oxophytodienoate reductase-like protein 1 isoform X2 [Solanum lycopersicum]
Solyc04g015760.3.1	1070	160.132242427592	70.8942550275196	-1.17552319458109	0.037619051528832	Down	0.0133786853524894	NA	NA	NA	K21286	gi|460381759|ref|XP_004236609.1|//PREDICTED: protein N-terminal glutamine amidohydrolase [Solanum lycopersicum]
Solyc08g041770.3.1	1677	279.720179404367	1055.15715849938	1.9154016538579	6.09840592406556e-10	Up	4.17804908619073e-11	NA	NA	NA	K20782	gi|460398799|ref|XP_004244939.1|//PREDICTED: uncharacterized protein LOC101260457 [Solanum lycopersicum]
Solyc09g090390.2.1	1842	5.87834887345537	0.706073834569692	-3.05752002387903	0.0467368143639364	Down	0.0172989625254916	NA	NA	NA	NA	gi|971562846|ref|XP_015167339.1|//PREDICTED: glycine-rich cell wall structural protein 1 [Solanum tuberosum]
Solyc01g109720.3.1	1869	4.98658234361564	1162.15769699484	7.86453875707488	1.73153778555906e-39	Up	5.55062805867301e-42	NA	NA	NA	NA	gi|460370228|ref|XP_004230956.1|//PREDICTED: monoacylglycerol lipase abhd6-A [Solanum lycopersicum]
Solyc07g007620.3.1	2817	677.189977747854	233.301985868948	-1.53736203423512	7.36336265806952e-05	Down	1.2477205398682e-05	NA	NA	NA	K03715//1,2-diacylglycerol 3-beta-galactosyltransferase [EC:2.4.1.46]	gi|460394288|ref|XP_004242736.1|//PREDICTED: monogalactosyldiacylglycerol synthase 2, chloroplastic [Solanum lycopersicum]
Solyc10g054420.2.1	1228	2901.9855006795	799.175232804859	-1.86045653276655	0.00021869478079221	Down	4.14841859047098e-05	NA	NA	NA	K02717//photosystem II oxygen-evolving enhancer protein 2	gi|460406466|ref|XP_004248685.1|//PREDICTED: psbP-like protein 2, chloroplastic [Solanum lycopersicum]
Solyc03g020040.3.1	800	666.380253297161	171.377820831499	-1.95916523770374	0.0411473583467736	Down	0.0148543374678881	NA	NA	NA	NA	gi|970017473|ref|XP_015069874.1|//PREDICTED: proteinase inhibitor type-2-like [Solanum pennellii]
Solyc05g013150.3.1	6096	1389.21020469392	152.860544000177	-3.18397693859581	1.12319470342653e-17	Down	2.66689662323952e-19	GO:0009536//plastid	GO:0008757//S-adenosylmethionine-dependent methyltransferase activity	GO:0006730//one-carbon metabolic process	K00592//[ribulose-bisphosphate carboxylase]-lysine N-methyltransferase [EC:2.1.1.127]	gi|970029349|ref|XP_015076001.1|//PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic-like [Solanum pennellii]
Solyc11g064750.2.1	5803	193.848631827051	20.403335173589	-3.24805365000481	0.00436576715349221	Down	0.00114896888454066	NA	NA	NA	K19589//release factor glutamine methyltransferase [EC:2.1.1.297];K15078//structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]	gi|723744637|ref|XP_010313231.1|//PREDICTED: pentatricopeptide repeat-containing protein At2g42920, chloroplastic isoform X2 [Solanum lycopersicum]
Solyc02g071360.3.1	3542	58.1030800140216	889.665247114284	3.93657605039712	1.70184024804342e-13	Up	6.77488215636787e-15	NA	NA	NA	K05278//flavonol synthase [EC:1.14.11.23];K05658//ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:3.6.3.44];K06892//feruloyl-CoA ortho-hydroxylase [EC:1.14.11.-]	gi|460374415|ref|XP_004233006.1|//PREDICTED: protein SRG1-like [Solanum lycopersicum];gi|460374409|ref|XP_004233003.1|//PREDICTED: protein SRG1-like [Solanum lycopersicum]
Solyc09g007130.3.1	1694	382.22476270244	3146.274859291	3.04115155795012	3.17764778898251e-15	Up	9.94939286363803e-17	GO:0044424//intracellular part	GO:0016742//hydroxymethyl-, formyl- and related transferase activity	GO:0009108//coenzyme biosynthetic process;GO:0006730//one-carbon metabolic process	K00606//3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]	gi|460402428|ref|XP_004246714.1|//PREDICTED: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial-like [Solanum lycopersicum]
Solyc10g007900.3.1	1397	98.3509306649353	533.367847868583	2.43912025044676	0.00212903461484121	Up	0.000512022190806451	NA	GO:0005506//iron ion binding;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K07428//cytochrome P450, family 4, subfamily X [EC:1.14.14.1]	gi|723735213|ref|XP_010327256.1|//PREDICTED: cytochrome P450 CYP72A219-like [Solanum lycopersicum]
Solyc04g072895.1.1	1449	60.8307520999458	358.776679674922	2.5602133721246	6.53224124853614e-06	Up	8.94567405215512e-07	NA	NA	NA	K18643//katanin p80 WD40 repeat-containing subunit B1;K14963//COMPASS component SWD3	gi|565374945|ref|XP_006354002.1|//PREDICTED: uncharacterized WD repeat-containing protein C2A9.03-like [Solanum tuberosum];gi|460384385|ref|XP_004237892.1|//PREDICTED: uncharacterized WD repeat-containing protein C2A9.03 [Solanum lycopersicum]
Solyc10g047110.2.1	1456	15.6330287963491	2.40945214991682	-2.69782026254718	0.018477890962912	Down	0.00586956115945787	NA	NA	NA	K00430//peroxidase [EC:1.11.1.7]	gi|460406999|ref|XP_004248945.1|//PREDICTED: peroxidase 43-like [Solanum lycopersicum]
Solyc02g071620.3.1	1409	761.85309177686	11550.0832679749	3.92224661279043	8.32598904994386e-17	Up	2.18173934028274e-18	NA	NA	NA	K21026;K17604//zinc finger SWIM domain-containing protein 3;K01188//beta-glucosidase [EC:3.2.1.21];K00679//phospholipid:diacylglycerol acyltransferase [EC:2.3.1.158];K10960//geranylgeranyl reductase [EC:1.3.1.83]	gi|460374407|ref|XP_004233002.1|//PREDICTED: GDSL esterase/lipase At1g29670-like [Solanum lycopersicum]
Solyc09g075390.3.1	3840	4676.37935005069	2070.48293744103	-1.17542465299444	2.03458177071195e-05	Down	3.0911567382667e-06	NA	NA	NA	NA	gi|460403848|ref|XP_004247398.1|//PREDICTED: putative GTP diphosphokinase RSH1, chloroplastic [Solanum lycopersicum]
Solyc08g077440.3.1	3137	3350.40557277852	21340.8472869893	2.67120980388276	1.4252179592291e-09	Up	1.03432956859216e-10	NA	GO:0004175//endopeptidase activity;GO:0032559//adenyl ribonucleotide binding;GO:0042623//ATPase activity, coupled	GO:0019538//protein metabolic process	K01338//ATP-dependent Lon protease [EC:3.4.21.53]	gi|723725386|ref|XP_010325534.1|//PREDICTED: lon protease homolog 2, peroxisomal isoform X1 [Solanum lycopersicum]
Solyc05g008230.3.1	2508	1558.18481751224	470.803943295475	-1.72666805366074	0.000106791151294359	Down	1.87657579923119e-05	NA	NA	NA	K08332//vacuolar protein 8	gi|460386326|ref|XP_004238849.1|//PREDICTED: U-box domain-containing protein 11 [Solanum lycopersicum]
Solyc06g007300.2.1	2568	68.6549812845244	18.3447375164732	-1.90399813727721	0.00753012322334435	Down	0.00212616234593833	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial	gi|460389550|ref|XP_004240414.1|//PREDICTED: putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial [Solanum lycopersicum]
Solyc03g118680.3.1	3756	1155.20612708541	487.43855965342	-1.24485801172814	0.00409233474315756	Down	0.0010682354333656	NA	NA	NA	K02350//DNA polymerase zeta [EC:2.7.7.7];K14026//SEL1 protein	gi|460380090|ref|XP_004235791.1|//PREDICTED: zinc finger protein VAR3, chloroplastic [Solanum lycopersicum]
Solyc02g079030.3.1	2705	153.482177313252	366.483116929698	1.25567560169364	1.04011149619911e-05	Up	1.48298379757744e-06	NA	GO:0001727//lipid kinase activity	GO:0007186//G-protein coupled receptor signaling pathway;GO:0006796//phosphate-containing compound metabolic process	K04718//sphingosine kinase [EC:2.7.1.91]	gi|460374017|ref|XP_004232808.1|//PREDICTED: sphingosine kinase 1 isoform X1 [Solanum lycopersicum]
Solyc01g107820.2.1	1869	6869.53458470978	80674.956264514	3.55383662662874	2.03043593909159e-07	Up	2.09037724160242e-08	NA	GO:0016757//transferase activity, transferring glycosyl groups	NA	K13496//UDP-glucosyl transferase 73C [EC:2.4.1.-]	gi|460369829|ref|XP_004230759.1|//PREDICTED: scopoletin glucosyltransferase [Solanum lycopersicum]
Solyc07g006600.1.1	558	93.8170813031175	5.95625240175354	-3.97737382268252	1.39569117154383e-05	Down	2.04036856075552e-06	NA	NA	NA	NA	gi|460394151|ref|XP_004242668.1|//PREDICTED: protein GLUTAMINE DUMPER 2 [Solanum lycopersicum]
Solyc10g080780.2.1	1188	399.389613016479	132.137854177757	-1.59575299118658	8.89103638299558e-05	Down	1.53508575093319e-05	GO:0043231//intracellular membrane-bounded organelle	GO:0003677//DNA binding;GO:0005515//protein binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0006351//transcription, DNA-templated	K14431//transcription factor TGA	gi|460407746|ref|XP_004249311.1|//PREDICTED: TGACG-sequence-specific DNA-binding protein TGA-2.1 [Solanum lycopersicum]
Solyc09g098580.3.1	3722	2408.1112657594	470.016552845998	-2.35711858172295	4.20762012564588e-12	Down	2.05299490997109e-13	NA	NA	NA	NA	gi|460405017|ref|XP_004247974.1|//PREDICTED: putative GTP diphosphokinase RSH1, chloroplastic isoform X2 [Solanum lycopersicum]
Solyc04g079290.3.1	1822	349.88042163415	71.5551160232962	-2.28973511243785	5.58280537101015e-07	Down	6.20751022130732e-08	NA	NA	NA	K00510//heme oxygenase (biliverdin-producing) [EC:1.14.14.18]	gi|350537003|ref|NP_001234531.1|//heme oxygenase 2 [Solanum lycopersicum]
Solyc06g065290.3.1	769	183.523733422507	442.521126115235	1.26977968610796	5.87796820988245e-05	Up	9.7827374597902e-06	NA	NA	NA	K17553//protein phosphatase 1 regulatory subunit 11	gi|460392457|ref|XP_004241832.1|//PREDICTED: type 1 phosphatases regulator ypi1 [Solanum lycopersicum]
Solyc09g064790.3.1	1280	1225.97927149951	534.670112489919	-1.19721364763509	0.00350551994634662	Down	0.000897678620523381	NA	NA	NA	NA	gi|460403328|ref|XP_004247143.1|//PREDICTED: protein PALE CRESS, chloroplastic [Solanum lycopersicum]
Solyc01g105070.3.1	1233	203.954288789359	6853.92650228554	5.07061297145066	4.6337392046941e-15	Up	1.47503104249618e-16	NA	GO:0016209//antioxidant activity;GO:0005506//iron ion binding;GO:0003824//catalytic activity	GO:0042743//hydrogen peroxide metabolic process;GO:0006950//response to stress	K00430//peroxidase [EC:1.11.1.7]	gi|906847345|ref|NP_001233970.2|//peroxidase cevi16 [Solanum lycopersicum]
Solyc10g049640.2.1	1843	25.1076661444972	146.385096954645	2.54356884864564	2.98072865267577e-07	Up	3.15983013575738e-08	GO:0016020//membrane	NA	GO:0006810//transport	K11584//serine/threonine-protein phosphatase 2A regulatory subunit B'	gi|460406940|ref|XP_004248916.1|//PREDICTED: probable polyamine transporter At3g19553 [Solanum lycopersicum]
Solyc04g078480.3.1	1246	573.092629908095	275.980698758713	-1.05420097013359	0.00119042151692677	Down	0.000268985210809978	NA	NA	NA	K16251//DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6]	gi|460384867|ref|XP_004238128.1|//PREDICTED: protein DCL, chloroplastic [Solanum lycopersicum]
Solyc03g025937.1.1	1807	87.3325720938269	309.392611752113	1.82484701010294	8.16318841594139e-06	Up	1.14530494996285e-06	NA	NA	NA	K10269//F-box and leucine-rich repeat protein 3;K10268//F-box and leucine-rich repeat protein 2/20;K10273//F-box and leucine-rich repeat protein 7	gi|460377195|ref|XP_004234380.1|//PREDICTED: F-box/LRR-repeat protein At3g48880 [Solanum lycopersicum];gi|723679557|ref|XP_010317593.1|//PREDICTED: uncharacterized protein LOC101247404 isoform X2 [Solanum lycopersicum]
BGI_novel_G000459	4708	198.072385094609	95.4338751973014	-1.05345439511167	0.0498078584837593	Down	0.0186417439628533	NA	NA	NA	K18195//rhamnogalacturonan endolyase [EC:4.2.2.23];K17982//geranyllinalool synthase [EC:4.2.3.144]	gi|971585127|ref|XP_015160427.1|//PREDICTED: uncharacterized protein LOC107058786 [Solanum tuberosum]
BGI_novel_G000120	1092	70.2135677740945	0.526522559754503	-7.05911068025836	2.94143721763667e-08	Down	2.59628870261057e-09	NA	NA	NA	K12639//cytochrome P450, family 724, subfamily B, polypeptide 1 [EC:1.14.13.-]	gi|971535349|ref|XP_015163569.1|//PREDICTED: cytochrome P450 724B1-like [Solanum tuberosum]
Solyc02g070010.1.1	1371	0.538465951387873	188.757290755413	8.4534615320423	2.24461360341984e-13	Up	9.06111723760132e-15	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial	gi|723675957|ref|XP_004233156.2|//PREDICTED: pentatricopeptide repeat-containing protein At2g01860 [Solanum lycopersicum]
Solyc01g100920.3.1	1995	157.045626599701	10.8195168932418	-3.85947578009781	0.000103620339470705	Down	1.81571200183311e-05	NA	NA	NA	K07874//Ras-related protein Rab-1A;K00801//farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]	gi|460368965|ref|XP_004230335.1|//PREDICTED: WAT1-related protein At1g09380 [Solanum lycopersicum]
Solyc02g076720.3.1	5056	3202.73241651546	1132.92590414214	-1.49924975934325	9.65912104515933e-05	Down	1.68138121667266e-05	NA	GO:0004642//phosphoribosylformylglycinamidine synthase activity	GO:0006189//'de novo' IMP biosynthetic process	K01952//phosphoribosylformylglycinamidine synthase [EC:6.3.5.3]	gi|460374455|ref|XP_004233026.1|//PREDICTED: probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial [Solanum lycopersicum];gi|971548614|ref|XP_015163739.1|//PREDICTED: LOW QUALITY PROTEIN: probable phosphoribosylformylglycinamidine synthase, chloroplastic/mitochondrial [Solanum tuberosum]
Solyc09g097970.3.1	1041	134.402942158156	48.3074729502816	-1.47624642997509	0.0178713943732584	Down	0.00565492272381803	NA	NA	NA	K05275//pyridoxine 4-dehydrogenase [EC:1.1.1.65]	gi|723733469|ref|XP_010326945.1|//PREDICTED: auxin-induced protein PCNT115-like [Solanum lycopersicum]
Solyc02g067925.1.1	8075	752.258822211089	2077.78518129481	1.46574547798518	3.34489390256478e-12	Up	1.60711504413523e-13	NA	NA	NA	K00006//glycerol-3-phosphate dehydrogenase (NAD+) [EC:1.1.1.8]	gi|460375032|ref|XP_004233312.1|//PREDICTED: alpha/beta hydrolase domain-containing protein 17B [Solanum lycopersicum]
Solyc09g097890.2.1	1566	214.541599801993	11.9517937948633	-4.16595834701861	5.03908304110941e-10	Down	3.4131760488509e-11	NA	NA	NA	K03189//urease accessory protein	gi|460405113|ref|XP_004248021.1|//PREDICTED: cytochrome b561 and DOMON domain-containing protein At3g25290-like [Solanum lycopersicum]
Solyc06g066160.3.1	1172	7.42975548806828	1.05415182637509	-2.81723206366079	0.0452610049540855	Down	0.0166346171480276	NA	NA	NA	K13081//leucoanthocyanidin reductase [EC:1.17.1.3]	gi|460392328|ref|XP_004241768.1|//PREDICTED: bifunctional pinoresinol-lariciresinol reductase-like [Solanum lycopersicum]
Solyc03g077910.3.1	2954	296.132951837739	64.5013476795126	-2.19884382422861	0.00060821442999286	Down	0.000128385206390695	NA	NA	NA	K20891;K00771//protein xylosyltransferase [EC:2.4.2.26]	gi|723682800|ref|XP_004235090.2|//PREDICTED: xylosyltransferase 1-like [Solanum lycopersicum]
Solyc08g079450.3.1	1522	555.005340606227	1154.24606758013	1.056377258104	0.00542236615022592	Up	0.00146412779156987	NA	NA	NA	K19367//maspardin	gi|460400385|ref|XP_004245715.1|//PREDICTED: maspardin [Solanum lycopersicum]
Solyc01g102810.3.1	4325	256.186970102787	96.1542969006735	-1.41377386615625	0.00042311773357164	Down	8.56392311500673e-05	NA	NA	NA	K10755//replication factor C subunit 2/4;K10756//replication factor C subunit 3/5	gi|723663583|ref|XP_010314184.1|//PREDICTED: protein STICHEL-like [Solanum lycopersicum]
Solyc02g071080.2.1	1267	53.4517965883963	14.7374454591289	-1.85875196568825	0.00416219196987962	Down	0.00108879764591528	NA	NA	NA	NA	gi|460374580|ref|XP_004233088.1|//PREDICTED: probable purine permease 10 [Solanum lycopersicum]
Solyc05g013290.1.1	963	0.485864346936007	140.701071909827	8.17786403385938	1.45502522072507e-12	Up	6.64382695463028e-14	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13435	gi|998071370|ref|NP_001307197.1|//serine/threonine protein kinase Fen [Solanum lycopersicum]
Solyc01g111630.3.1	2346	32201.1272302376	5750.98329478383	-2.48523063993232	6.62926864082178e-16	Down	1.93234235765716e-17	NA	GO:0016616//oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;GO:0000166//nucleotide binding	GO:0008152//metabolic process	K15893//hydroxypyruvate reductase 1	gi|460370413|ref|XP_004231047.1|//PREDICTED: glycerate dehydrogenase [Solanum lycopersicum]
Solyc03g115200.3.1	1337	1436.20890895467	346.588423257864	-2.05097024530931	0.0340148491879601	Down	0.0119067186791462	NA	NA	NA	K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6];K19891//glucan endo-1,3-beta-glucosidase 1/2/3 [EC:3.2.1.39]	gi|460380558|ref|XP_004236022.1|//PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Solanum lycopersicum]
Solyc04g078910.3.1	1954	1688.7376972524	480.056746975837	-1.81466839889698	8.28207987473516e-05	Down	1.41914123990449e-05	GO:0005737//cytoplasm	GO:0015036//disulfide oxidoreductase activity;GO:0015035//protein disulfide oxidoreductase activity;GO:0016671//oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	GO:0000103//sulfate assimilation;GO:0006457//protein folding;GO:0055114//oxidation-reduction process;GO:0045454//cell redox homeostasis;GO:0006662//glycerol ether metabolic process;GO:0018904//ether metabolic process;GO:0019725//cellular homeostasis;GO:0034599//cellular response to oxidative stress	K03671//thioredoxin 1	gi|723695350|ref|XP_010320331.1|//PREDICTED: thioredoxin-like 4, chloroplastic [Solanum lycopersicum]
Solyc04g080030.3.1	6809	658.355407809663	316.922102994117	-1.05473834080086	0.00937308950139585	Down	0.00271920216152393	NA	NA	NA	K13510//lysophosphatidylcholine acyltransferase / lyso-PAF acetyltransferase [EC:2.3.1.23 2.3.1.67]	gi|460385082|ref|XP_004238234.1|//PREDICTED: deSI-like protein At4g17486 [Solanum lycopersicum]
Solyc11g062430.2.1	1678	949.761392529134	296.32078212762	-1.68040530068023	4.60202953328451e-05	Down	7.45676993483963e-06	NA	NA	NA	K12176//COP9 signalosome complex subunit 2	gi|460410967|ref|XP_004250886.1|//PREDICTED: COP9 signalosome complex subunit 2 isoform X1 [Solanum lycopersicum];gi|723744625|ref|XP_010313229.1|//PREDICTED: COP9 signalosome complex subunit 2 isoform X2 [Solanum lycopersicum]
Solyc06g008780.2.1	1311	25.3246413595954	0.401171061729046	-5.98018048627817	8.48578657573824e-06	Down	1.1946777954586e-06	NA	GO:0043178//alcohol binding	GO:0009755//hormone-mediated signaling pathway	K14485//transport inhibitor response 1	gi|565394679|ref|XP_006362984.1|//PREDICTED: protein TRANSPORT INHIBITOR RESPONSE 1-like isoform X2 [Solanum tuberosum]
BGI_novel_G000273	2822	30.6123219573713	9.08811684740426	-1.7520591889945	0.0391666002832123	Down	0.0140250713263609	NA	NA	NA	K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6];K03549//KUP system potassium uptake protein;K12447//UDP-sugar pyrophosphorylase [EC:2.7.7.64];K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|723693275|ref|XP_010319957.1|//PREDICTED: uncharacterized protein LOC104647082 [Solanum lycopersicum]
Solyc09g082470.3.1	2229	886.264136210716	5533.53228971922	2.6423920691914	2.82986238285436e-10	Up	1.8322166986052e-11	NA	GO:0005524//ATP binding;GO:0004672//protein kinase activity	GO:0006468//protein phosphorylation	K04424//sterile alpha motif and leucine zipper containing kinase AZK [EC:2.7.11.25];K17535//serine/threonine-protein kinase TNNI3K [EC:2.7.11.1];K04365//B-Raf proto-oncogene serine/threonine-protein kinase [EC:2.7.11.1]	gi|970054063|ref|XP_015088662.1|//PREDICTED: serine/threonine-protein kinase STY8-like isoform X2 [Solanum pennellii];gi|460404227|ref|XP_004247585.1|//PREDICTED: serine/threonine-protein kinase HT1 [Solanum lycopersicum]
Solyc09g090860.3.1	1061	147.693353451592	405.878364133806	1.45844253448558	5.0848029307039e-05	Up	8.32706501426906e-06	NA	NA	NA	K08497//protein transport protein SEC20	gi|460404632|ref|XP_004247785.1|//PREDICTED: uncharacterized protein LOC101268430 [Solanum lycopersicum]
Solyc11g065000.2.1	2633	1186.33847050904	537.491412406942	-1.14220206959984	3.80718872353229e-05	Down	6.0922398949322e-06	NA	NA	NA	K01640//hydroxymethylglutaryl-CoA lyase [EC:4.1.3.4]	gi|460410995|ref|XP_004250900.1|//PREDICTED: F-box protein At2g32560 isoform X2 [Solanum lycopersicum]
Solyc06g082610.3.1	2769	866.569604818543	185.792362277717	-2.22162443923528	0.000804777200188816	Down	0.000174676369341713	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723711649|ref|XP_010323112.1|//PREDICTED: probable inactive receptor kinase At5g58300 [Solanum lycopersicum]
Solyc12g096500.2.1	1413	4354.60722188664	1597.27152851756	-1.44693301121914	0.000737814770582305	Down	0.000158684628979421	NA	NA	NA	K12135//zinc finger protein CONSTANS	gi|460415413|ref|XP_004253053.1|//PREDICTED: zinc finger protein CONSTANS-LIKE 4-like [Solanum lycopersicum]
Solyc04g050960.3.1	3708	532.41142667483	162.984922560976	-1.70780302533537	0.0380364497165812	Down	0.0135427228154459	NA	NA	NA	K03580//ATP-dependent helicase HepA [EC:3.6.4.-]	gi|460383574|ref|XP_004237496.1|//PREDICTED: uncharacterized protein LOC101267400 [Solanum lycopersicum]
Solyc08g059760.3.1	1688	1946.8849140789	531.517849490716	-1.8729775583337	7.24416554658245e-06	Down	1.00259380775535e-06	NA	GO:0016209//antioxidant activity;GO:0005506//iron ion binding	GO:0008152//metabolic process;GO:0006950//response to stress	K00434//L-ascorbate peroxidase [EC:1.11.1.11]	gi|723721922|ref|XP_010324980.1|//PREDICTED: putative L-ascorbate peroxidase 6 isoform X11 [Solanum lycopersicum];gi|723721887|ref|XP_010324971.1|//PREDICTED: putative L-ascorbate peroxidase 6 isoform X3 [Solanum lycopersicum];gi|723721901|ref|XP_010324975.1|//PREDICTED: putative L-ascorbate peroxidase 6 isoform X6 [Solanum lycopersicum];gi|723721884|ref|XP_010324970.1|//PREDICTED: putative L-ascorbate peroxidase 6 isoform X2 [Solanum lycopersicum]
Solyc09g055930.3.1	2255	505.330955644773	235.453558315725	-1.10178603383023	0.0388490498734962	Down	0.0138925927250978	NA	GO:0046914//transition metal ion binding;GO:0003824//catalytic activity	GO:0008152//metabolic process	K19791//iron transport multicopper oxidase	gi|460403071|ref|XP_004247026.1|//PREDICTED: monocopper oxidase-like protein SKU5 isoform X1 [Solanum lycopersicum]
Solyc05g052480.3.1	8768	917.862388512684	419.723490810733	-1.12883866297612	0.00519895257557816	Down	0.00139546956525788	NA	NA	NA	K03103//multiple inositol-polyphosphate phosphatase / 2,3-bisphosphoglycerate 3-phosphatase [EC:3.1.3.62 3.1.3.80]	gi|460388588|ref|XP_004239949.1|//PREDICTED: probable apyrase 7 [Solanum lycopersicum]
Solyc12g056400.2.1	1625	379.384280116833	184.001800741835	-1.04394001620478	0.00140591466284262	Down	0.000322918076354414	NA	NA	NA	K13148//integrator complex subunit 11 [EC:3.1.27.-]	gi|460414447|ref|XP_004252582.1|//PREDICTED: E3 ubiquitin-protein ligase At1g63170-like [Solanum lycopersicum]
Solyc04g078860.3.1	4018	39.0236870618954	453.201136082427	3.53772947853435	1.13431879979508e-18	Up	2.4142538940025e-20	NA	NA	NA	K05387//glutamate receptor, ionotropic, plant	gi|460384913|ref|XP_004238151.1|//PREDICTED: glutamate receptor 2.9 isoform X1 [Solanum lycopersicum]
Solyc01g005470.3.1	867	523.271363045925	9380.75257196127	4.1640724555813	3.47096471307234e-11	Up	1.95361440164724e-12	NA	NA	NA	K14006//protein transport protein SEC23	gi|460365665|ref|XP_004228721.1|//PREDICTED: protein PLANT CADMIUM RESISTANCE 2-like [Solanum lycopersicum]
Solyc10g006950.1.1	159	5.32958857245453	20.5049304148283	1.94387477691187	0.0177830257401357	Up	0.00561900660500709	NA	NA	NA	NA	gi|723734566|ref|XP_010327140.1|//PREDICTED: putative F-box/kelch-repeat protein At1g15680 [Solanum lycopersicum]
Solyc06g060560.3.1	1033	692.855742860274	169.233849448417	-2.0335368458343	5.31833131045486e-06	Down	7.16035958452474e-07	NA	NA	NA	NA	gi|460392820|ref|XP_004242011.1|//PREDICTED: uncharacterized protein LOC101256008 [Solanum lycopersicum]
Solyc01g103000.2.1	1900	47.275539230897	13.23572383821	-1.8366568184164	0.00573471027517816	Down	0.00156150509021084	NA	GO:0000166//nucleotide binding	NA	K03544//ATP-dependent Clp protease ATP-binding subunit ClpX	gi|565365138|ref|XP_006349274.1|//PREDICTED: CLP protease regulatory subunit CLPX2, mitochondrial [Solanum tuberosum]
Solyc12g006460.2.1	1681	9424.8099142007	422.067961069622	-4.48091629701341	8.98764524597604e-09	Down	7.3568171165064e-10	NA	NA	NA	K04123//ent-kaurenoic acid hydroxylase [EC:1.14.13.79]	gi|723747292|ref|XP_010313690.1|//PREDICTED: ent-kaurenoic acid oxidase 2 [Solanum lycopersicum]
Solyc02g085030.3.1	2201	602.560422803889	175.124881502611	-1.78272184290977	0.0262757111852516	Down	0.00884508527337139	NA	NA	NA	K20473//neuroblastoma-amplified sequence	gi|723672327|ref|XP_010316381.1|//PREDICTED: LOW QUALITY PROTEIN: auxilin-like protein 1 [Solanum lycopersicum]
Solyc07g043450.2.1	1221	619.764277534793	40.4346282347585	-3.93805634995919	0.000297096596997883	Down	5.80394835569519e-05	NA	NA	NA	K13495//cis-zeatin O-glucosyltransferase [EC:2.4.1.215]	gi|970042031|ref|XP_015082409.1|//PREDICTED: zeatin O-xylosyltransferase-like [Solanum pennellii]
Solyc11g045610.2.1	2585	50.079218107095	140.106680130946	1.48424180091992	0.000896516266550055	Up	0.000197295066263289	NA	NA	NA	K08819//cyclin-dependent kinase 12/13 [EC:2.7.11.22 2.7.11.23]	gi|460410864|ref|XP_004250837.1|//PREDICTED: probable serine/threonine-protein kinase At1g09600 [Solanum lycopersicum]
Solyc09g018890.3.1	1580	4842.23638827457	104.763120296033	-5.53047067032287	1.55800179539239e-27	Down	1.35311770659917e-29	NA	NA	NA	NA	gi|460401479|ref|XP_004246251.1|//PREDICTED: uncharacterized protein LOC101248905 [Solanum lycopersicum]
Solyc05g007500.3.1	3167	1863.61530970002	896.345724445443	-1.05597688893495	5.82753199537185e-05	Down	9.69227961955763e-06	NA	GO:0000166//nucleotide binding;GO:0034062//RNA polymerase activity;GO:0005488//binding;GO:0003968//RNA-directed RNA polymerase activity	GO:0060148//positive regulation of posttranscriptional gene silencing;GO:0010025//wax biosynthetic process;GO:0009615//response to virus;GO:0030422//production of siRNA involved in RNA interference;GO:0001172//transcription, RNA-templated	K07052//uncharacterized protein;K11699//RNA-dependent RNA polymerase [EC:2.7.7.48]	gi|113205325|gb|AAT38751.2|//RNA-directed RNA polymerase, putative [Solanum demissum];gi|460386219|ref|XP_004238797.1|//PREDICTED: uncharacterized protein LOC101265823 [Solanum lycopersicum]
Solyc08g076090.3.1	2332	1487.55109276987	463.092689762298	-1.68356633297796	2.7567898513949e-10	Down	1.77873983627724e-11	NA	NA	NA	NA	gi|460400881|ref|XP_004245960.1|//PREDICTED: uncharacterized protein LOC101262445 [Solanum lycopersicum]
Solyc12g009020.2.1	2036	2075.3582459444	4572.61002240022	1.13965748903044	0.00337276381650907	Up	0.000858025683900193	GO:0005737//cytoplasm	GO:0004674//protein serine/threonine kinase activity;GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity;GO:0004702//receptor signaling protein serine/threonine kinase activity	GO:0023014//signal transduction by protein phosphorylation;GO:0006464//cellular protein modification process;GO:0006468//protein phosphorylation	K20603;K04368//mitogen-activated protein kinase kinase 1 [EC:2.7.12.2]	gi|698572099|ref|XP_009775056.1|//PREDICTED: mitogen-activated protein kinase kinase 2-like [Nicotiana sylvestris];gi|954170012|ref|NP_001304158.1|//MAP kinase kinase [Solanum lycopersicum]
Solyc01g088710.3.1	1765	384.016564711055	1591.88064745625	2.05149172406456	4.14240951056776e-07	Up	4.50711695293994e-08	NA	NA	NA	NA	gi|460367719|ref|XP_004229718.1|//PREDICTED: metacaspase-1 [Solanum lycopersicum]
BGI_novel_G000456	4709	140.149747335844	25.1514490506711	-2.47825571791872	4.55577008462813e-06	Down	6.03688782274229e-07	NA	NA	NA	K03013//DNA-directed RNA polymerases I, II, and III subunit RPABC1;K08596//sentrin-specific protease 7 [EC:3.4.22.68];K02328//DNA polymerase delta subunit 2	gi|970061476|ref|XP_015057553.1|//PREDICTED: uncharacterized protein LOC107003796 [Solanum pennellii]
Solyc11g008103.1.1	2098	469.197112264744	1002.89199649976	1.09590020827115	0.000941651027417252	Up	0.000208386094743411	NA	NA	NA	NA	gi|723741220|ref|XP_010312588.1|//PREDICTED: uncharacterized protein LOC101264582 isoform X1 [Solanum lycopersicum];gi|460409222|ref|XP_004250038.1|//PREDICTED: uncharacterized protein LOC101264582 isoform X2 [Solanum lycopersicum]
BGI_novel_G000190	1313	29.2968179077347	178.332683379639	2.60575525369432	7.02991769492419e-10	Up	4.87126024857018e-11	NA	NA	NA	NA	gi|723693715|ref|XP_010320062.1|//PREDICTED: protein MKS1-like [Solanum lycopersicum]
Solyc04g007380.2.1	1254	69.0350487256492	914.478247143673	3.72754795117322	5.41597928394892e-05	Up	8.9431892902541e-06	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723691085|ref|XP_004237005.2|//PREDICTED: probable receptor-like protein kinase At5g39020 [Solanum lycopersicum]
Solyc11g005860.2.1	4275	7.72595867270366	72.7382131322637	3.23492761984959	3.5506446420669e-05	Up	5.65657343081628e-06	NA	NA	NA	K11717//cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]	gi|460410066|ref|XP_004250452.1|//PREDICTED: uncharacterized protein LOC101264284 [Solanum lycopersicum]
Solyc01g098950.2.1	1016	32.8201210660714	4.57342236229163	-2.84323449521795	0.00431283240962975	Down	0.00113334831101423	NA	GO:0016620//oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor;GO:0000166//nucleotide binding	GO:0019318//hexose metabolic process	K00134//glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12]	gi|970027111|ref|XP_015074866.1|//PREDICTED: glyceraldehyde-3-phosphate dehydrogenase GAPC1, cytosolic-like [Solanum pennellii]
Solyc03g007090.1.1	1437	29.6892487107984	123.585534155483	2.05749739246187	0.00385303932707234	Up	0.000998590369805202	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K12812//ATP-dependent RNA helicase UAP56/SUB2 [EC:3.6.4.13];K18081//myotubularin-related protein 1/2 [EC:3.1.3.64 3.1.3.95]	gi|460376744|ref|XP_004234157.1|//PREDICTED: uncharacterized protein LOC101245820 [Solanum lycopersicum]
Solyc01g111730.3.1	2008	1108.23845427367	518.272337039716	-1.09648603589955	0.00573635732563671	Down	0.00156216738560839	GO:0043234//protein complex	GO:0043169//cation binding;GO:0004721//phosphoprotein phosphatase activity	GO:0006464//cellular protein modification process	K01102//pyruvate dehydrogenase phosphatase [EC:3.1.3.43]	gi|460370431|ref|XP_004231056.1|//PREDICTED: probable protein phosphatase 2C 46 [Solanum lycopersicum]
Solyc09g007530.3.1	2012	603.832552880296	1425.26933747302	1.23901413511243	0.00771329310115426	Up	0.00218363132187515	NA	GO:0008270//zinc ion binding	NA	K10635//E3 ubiquitin-protein ligase Arkadia [EC:2.3.2.27];K19041//E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27]	gi|460402343|ref|XP_004246672.1|//PREDICTED: uncharacterized protein LOC101251216 [Solanum lycopersicum]
Solyc04g007900.3.1	730	251.481759438581	640.041216595165	1.34771105125028	0.0104757054385384	Up	0.00307812680676899	NA	NA	NA	K14006//protein transport protein SEC23	gi|460382428|ref|XP_004236941.1|//PREDICTED: protein PLANT CADMIUM RESISTANCE 2 [Solanum lycopersicum]
Solyc02g079960.3.1	1245	464.291189142706	1044.38665622629	1.1695541218138	0.0164371222769532	Up	0.00512817628813548	NA	GO:0015036//disulfide oxidoreductase activity	GO:0019725//cellular homeostasis;GO:0018904//ether metabolic process	K03671//thioredoxin 1	gi|460373910|ref|XP_004232755.1|//PREDICTED: thioredoxin-like protein CXXS1 [Solanum lycopersicum]
Solyc07g063230.3.1	2499	392.091218903585	69.0523108998951	-2.50542773073799	8.78822008102332e-05	Down	1.51667880479864e-05	GO:0031224//intrinsic component of membrane	NA	NA	K15377//solute carrier family 44 (choline transporter-like protein), member 2/4/5	gi|460397334|ref|XP_004244222.1|//PREDICTED: choline transporter-like protein 2 [Solanum lycopersicum]
Solyc12g100250.2.1	1473	78.9091319893081	1359.99739199954	4.10726780467799	2.19179122547349e-07	Up	2.26384877209894e-08	NA	GO:0016705//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	GO:0044238//primary metabolic process	K10256//omega-6 fatty acid desaturase / acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.6 1.14.19.22]	gi|460415027|ref|XP_004252862.1|//PREDICTED: omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2-like isoform X1 [Solanum lycopersicum];gi|723752680|ref|XP_010314673.1|//PREDICTED: omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2-like isoform X2 [Solanum lycopersicum]
Solyc08g082250.3.1	2467	2299.44412730412	906.605277621261	-1.34273867831459	0.00200010958437415	Down	0.000477736030142744	NA	GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0005488//binding	GO:0044238//primary metabolic process	K01179//endoglucanase [EC:3.2.1.4]	gi|350535030|ref|NP_001234172.1|//endo-beta-1,4-D-glucanase precursor [Solanum lycopersicum]
Solyc06g060830.3.1	1721	3463.65848912508	31.2099656065214	-6.79414611215448	8.10607029100749e-32	Down	5.13654372100519e-34	NA	NA	NA	K09338//homeobox-leucine zipper protein	gi|460392779|ref|XP_004241991.1|//PREDICTED: homeobox-leucine zipper protein HAT4 [Solanum lycopersicum]
Solyc10g054440.2.1	2016	10345.3611364849	27870.3765612201	1.42974848730059	0.00015500182178424	Up	2.8477858191983e-05	NA	GO:0016831//carboxy-lyase activity	GO:0006525//arginine metabolic process;GO:0006596//polyamine biosynthetic process	K01583//arginine decarboxylase [EC:4.1.1.19]	gi|350537969|ref|NP_001234064.1|//arginine decarboxylase [Solanum lycopersicum]
Solyc05g009420.1.1	942	305.199882677128	1602.38982965788	2.39239885683629	1.86815531165975e-16	Up	5.08332107317586e-18	NA	NA	NA	NA	gi|460386494|ref|XP_004238933.1|//PREDICTED: uncharacterized protein LOC101255885 [Solanum lycopersicum]
Solyc09g084450.3.1	596	1393.99966323125	144.459943957474	-3.27048879175558	0.00263500651102502	Down	0.000651090583032087	NA	GO:0016787//hydrolase activity;GO:0004866//endopeptidase inhibitor activity	GO:0006950//response to stress;GO:0051346//negative regulation of hydrolase activity	NA	gi|460404371|ref|XP_004247656.1|//PREDICTED: wound-induced proteinase inhibitor 1 [Solanum lycopersicum]
Solyc11g011340.2.1	1596	417.873160610564	6243.99838826358	3.90133316038892	7.39334392948797e-11	Up	4.37792594633572e-12	NA	GO:0046914//transition metal ion binding;GO:0008270//zinc ion binding;GO:0003824//catalytic activity;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process;GO:0055114//oxidation-reduction process	K00083//cinnamyl-alcohol dehydrogenase [EC:1.1.1.195]	gi|955471901|ref|NP_001304266.1|//8-hydroxygeraniol dehydrogenase [Solanum lycopersicum]
Solyc12g015840.2.1	1970	696.459251348052	239.493052586906	-1.54005513997666	0.00249001306423768	Down	0.000610994334347571	NA	NA	NA	K19525//vacuolar protein sorting-associated protein 13A/C;K05527//BolA protein	gi|723748858|ref|XP_010313953.1|//PREDICTED: LOW QUALITY PROTEIN: sufE-like protein, chloroplastic [Solanum lycopersicum];gi|970046755|ref|XP_015084887.1|//PREDICTED: uncharacterized protein LOC107028368 [Solanum pennellii]
Solyc05g015150.3.1	3507	451.673111176174	64.10218687351	-2.81683354943069	2.43493573100321e-09	Down	1.83155669642332e-10	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460387045|ref|XP_004239201.1|//PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830 [Solanum lycopersicum]
Solyc01g008000.3.1	1072	3832.92132892512	10876.5459242682	1.50470417909086	1.30356493167675e-08	Up	1.0947263273698e-09	GO:0044464//cell part;GO:0005622//intracellular	GO:0032561//guanyl ribonucleotide binding;GO:0005525//GTP binding	GO:0007264//small GTPase mediated signal transduction;GO:0035556//intracellular signal transduction	K07937//ADP-ribosylation factor 1	gi|697151091|ref|XP_009629758.1|//PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis]
Solyc02g083070.2.1	858	7.92365788665785	0.695307708125786	-3.51044310316642	0.014918691523639	Down	0.00459994842267564	NA	NA	NA	NA	gi|460375919|ref|XP_004233750.1|//PREDICTED: uncharacterized protein LOC101267770 [Solanum lycopersicum]
Solyc04g008380.3.1	1350	1608.95129801195	3421.74200612679	1.08861032981871	8.50159994938529e-05	Up	1.46221967890553e-05	NA	NA	NA	NA	gi|525313715|ref|NP_001266117.1|//GAGA-binding transcriptional activator [Solanum lycopersicum]
Solyc10g080080.2.1	2107	4667.21370929977	786.755898267652	-2.56857353458781	1.59870179287115e-17	Down	3.90915601656282e-19	NA	NA	NA	K00384//thioredoxin reductase (NADPH) [EC:1.8.1.9]	gi|460407640|ref|XP_004249259.1|//PREDICTED: thioredoxin reductase NTRC [Solanum lycopersicum]
Solyc09g014410.3.1	3658	247.824015547348	880.423097078106	1.82888099392981	0.00302798937679496	Up	0.000760496213688849	NA	NA	NA	K18998//RNA polymerase II C-terminal domain phosphatase-like 1/2 [EC:3.1.3.16];K04688//p70 ribosomal S6 kinase [EC:2.7.11.1]	gi|460401652|ref|XP_004246331.1|//PREDICTED: BTB/POZ domain-containing protein At3g09030 [Solanum lycopersicum]
Solyc04g082200.2.1	1156	11330.9231803883	198020.96375242	4.12731585741673	4.04212475737385e-10	Up	2.69093291213273e-11	NA	NA	GO:0050896//response to stimulus	K17046//protein DEK;K11131//H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]	gi|970025416|ref|XP_015074020.1|//PREDICTED: phosphoprotein ECPP44 [Solanum pennellii];gi|559807365|gb|AHB20199.1|//dehydrin [Solanum habrochaites];gi|460385439|ref|XP_004238411.1|//PREDICTED: phosphoprotein ECPP44 [Solanum lycopersicum]
Solyc06g063365.1.1	1655	3.15149649103933	37.1436432871951	3.55900636950297	3.77870355553629e-05	Up	6.0424326275722e-06	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1];K15813//beta-amyrin synthase [EC:5.4.99.39]	gi|723709926|ref|XP_010322794.1|//PREDICTED: reticulon-like protein B22 isoform X2 [Solanum lycopersicum];gi|460392507|ref|XP_004241857.1|//PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 5-like isoform X1 [Solanum lycopersicum]
Solyc11g005810.2.1	1853	1162.99928314715	532.794795282851	-1.12619831323582	3.54499855991906e-07	Down	3.8174671386634e-08	NA	NA	NA	NA	gi|460408937|ref|XP_004249897.1|//PREDICTED: uncharacterized protein LOC101246584 [Solanum lycopersicum]
Solyc01g066260.2.1	542	37.9551230261813	120.643637710058	1.66838530233937	0.0357801675448097	Up	0.0126140161263907	NA	NA	NA	NA	NA
Solyc08g080170.3.1	2766	3656.54997587626	1204.18565390882	-1.60242524512801	0.0064179148883565	Down	0.00177512513344123	NA	GO:0016747//transferase activity, transferring acyl groups other than amino-acyl groups;GO:0046912//transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer	GO:0006720//isoprenoid metabolic process	K01641//hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]	gi|460400275|ref|XP_004245661.1|//PREDICTED: hydroxymethylglutaryl-CoA synthase [Solanum lycopersicum];gi|970047473|ref|XP_015085265.1|//PREDICTED: hydroxymethylglutaryl-CoA synthase [Solanum pennellii]
Solyc05g012820.1.1	975	78.1032108276583	577.388129345648	2.88608768320386	1.48651145014801e-05	Up	2.19142417822252e-06	NA	NA	NA	NA	gi|970027320|ref|XP_015074966.1|//PREDICTED: uncharacterized protein LOC107018893 [Solanum pennellii]
Solyc10g074630.2.1	1603	304.834033785679	748.651340079237	1.29627000267059	4.77085929017788e-07	Up	5.23179813318299e-08	GO:0044464//cell part	GO:0032561//guanyl ribonucleotide binding	GO:0035556//intracellular signal transduction	K07952//ADP-ribosylation factor related protein 1;K13459//disease resistance protein RPS2	gi|460407132|ref|XP_004249010.1|//PREDICTED: ADP-ribosylation factor-related protein 1 [Solanum lycopersicum];gi|971572258|ref|XP_015169915.1|//PREDICTED: LOW QUALITY PROTEIN: disease resistance protein RPS2-like [Solanum tuberosum]
Solyc03g082600.3.1	1131	1887.61495014224	7177.53172721928	1.92692329971242	7.49328223310133e-13	Up	3.28745832278227e-14	NA	GO:0005506//iron ion binding	NA	K10534//nitrate reductase (NAD(P)H) [EC:1.7.1.1 1.7.1.2 1.7.1.3]	gi|815890999|ref|NP_001295127.1|//cytochrome b5 isoform A [Solanum lycopersicum]
Solyc03g116440.2.1	2998	6.21054316497874	50.3837273753249	3.02016650116762	0.00101955613889104	Up	0.000226880503547768	NA	NA	NA	NA	gi|460381456|ref|XP_004236465.1|//PREDICTED: PHD finger protein At2g01810-like [Solanum lycopersicum]
Solyc05g008860.3.1	2583	522.793057821513	220.276411372853	-1.24692497352098	0.0397706107537258	Down	0.0142772756884275	GO:0031224//intrinsic component of membrane	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity;GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	GO:0006464//cellular protein modification process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460386414|ref|XP_004238893.1|//PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At1g66830 [Solanum lycopersicum]
Solyc05g055660.3.1	2322	16.068586006648	259.09976211783	4.01119280462753	4.11544260125997e-15	Up	1.30237467141409e-16	NA	GO:0008429//phosphatidylethanolamine binding	GO:0009909//regulation of flower development;GO:0048573//photoperiodism, flowering	K16223//protein FLOWERING LOCUS T	gi|28200394|gb|AAO31794.1|//SP6A [Solanum lycopersicum]
Solyc06g070980.3.1	1167	6051.95129620404	14233.4848324274	1.23381664258309	3.08280586802171e-05	Up	4.84920261035173e-06	NA	GO:0016879//ligase activity, forming carbon-nitrogen bonds;GO:0032559//adenyl ribonucleotide binding	GO:0006464//cellular protein modification process	K10573//ubiquitin-conjugating enzyme E2 A [EC:2.3.2.23]	gi|922335550|ref|XP_013445765.1|//ubiquitin-conjugating enzyme [Medicago truncatula]
Solyc01g065490.3.1	466	9.64033457560868	0.663481777713956	-3.86095446906547	0.0231794729004877	Down	0.00764210667231302	NA	NA	NA	K17744//L-galactose dehydrogenase [EC:1.1.1.316]	gi|565395917|ref|XP_006363582.1|//PREDICTED: probable aldo-keto reductase 2 isoform X1 [Solanum tuberosum]
Solyc08g014090.1.1	561	1.05045603975531	10.5215274313475	3.32425646534088	0.00848066327280109	Up	0.00242553038960052	NA	NA	NA	NA	NA
Solyc07g041830.3.1	1216	584.663138406626	1179.92105610607	1.01301279687227	0.024859954008691	Up	0.00828881350110857	NA	NA	NA	NA	gi|460396292|ref|XP_004243710.1|//PREDICTED: uncharacterized protein LOC101253102 [Solanum lycopersicum]
Solyc06g065560.2.1	3211	913.520825322281	7637.39520298734	3.06357115590942	3.38170296586381e-20	Up	6.16390618125617e-22	GO:0016021//integral component of membrane	GO:0016747//transferase activity, transferring acyl groups other than amino-acyl groups	GO:0006633//fatty acid biosynthetic process	K15397//3-ketoacyl-CoA synthase [EC:2.3.1.199]	gi|460392410|ref|XP_004241809.1|//PREDICTED: 3-ketoacyl-CoA synthase 11-like [Solanum lycopersicum];gi|613433849|gb|AHX25587.1|//3-ketoacyl-CoA synthase 11 [Nicotiana tabacum]
Solyc08g016000.1.1	354	873.53333927589	392.975133349856	-1.1524247414691	0.000166626615646006	Down	3.08123840845324e-05	GO:0031224//intrinsic component of membrane;GO:0009941//chloroplast envelope	NA	NA	NA	gi|544163672|ref|YP_008563147.1|//hypothetical chloroplast RF1 (chloroplast) [Solanum lycopersicum]
Solyc10g007700.3.1	2059	335.062449765996	819.915184608442	1.29104466546048	0.00012068736315596	Up	2.1498617434111e-05	GO:0016020//membrane;GO:0043231//intracellular membrane-bounded organelle	GO:0032561//guanyl ribonucleotide binding	GO:0048193//Golgi vesicle transport;GO:0035556//intracellular signal transduction	K07877//Ras-related protein Rab-2A	gi|460405505|ref|XP_004248216.1|//PREDICTED: ras-related protein RABB1c [Solanum lycopersicum]
Solyc02g068170.1.1	501	7.21349223687992	45.0662361067605	2.6432771830091	0.00376538031538195	Up	0.000973766536011628	NA	NA	NA	NA	gi|802539270|ref|XP_012070196.1|//PREDICTED: uncharacterized protein LOC105632422 [Jatropha curcas]
Solyc02g075620.3.1	1059	52.8621217897787	2.74982292301749	-4.26482371003272	4.06415604976632e-05	Down	6.53525018588485e-06	GO:0030312//external encapsulating structure	NA	GO:0071555//cell wall organization	K01051//pectinesterase [EC:3.1.1.11]	gi|723675150|ref|XP_010316821.1|//PREDICTED: probable pectinesterase 53 [Solanum lycopersicum]
Solyc02g085590.3.1	2366	101.872879175485	11.3125584589198	-3.17077287251967	0.00077015424596847	Down	0.000166529923246723	NA	NA	NA	NA	gi|460375851|ref|XP_004233717.1|//PREDICTED: globulin-1 S allele-like [Solanum lycopersicum]
Solyc12g009720.2.1	1959	5.88155848444272	104.623659266688	4.1528668364211	3.41192726497571e-05	Up	5.42667870868173e-06	NA	NA	NA	K19613//leucine-rich repeat protein SHOC2;K10406//kinesin family member C2/C3	gi|723749424|ref|XP_010314065.1|//PREDICTED: receptor-like protein 12 [Solanum lycopersicum]
Solyc09g005120.3.1	2261	105.78203821225	1417.95812270103	3.74464834156519	7.93830798973829e-19	Up	1.66885556366945e-20	NA	NA	NA	K03686//molecular chaperone DnaJ;K10863//aprataxin [EC:3.-.-.-]	gi|460402555|ref|XP_004246777.1|//PREDICTED: dnaJ protein ERDJ3A [Solanum lycopersicum]
Solyc06g005350.3.1	1222	40.3614555066567	99.5401770676205	1.30230075180409	0.00365067305593421	Up	0.000940836197581972	GO:0005622//intracellular	GO:0032561//guanyl ribonucleotide binding;GO:0005525//GTP binding	GO:0006810//transport;GO:0007264//small GTPase mediated signal transduction;GO:0035556//intracellular signal transduction	K07901//Ras-related protein Rab-8A	gi|460389423|ref|XP_004240353.1|//PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABE1c [Solanum lycopersicum]
Solyc02g085010.1.1	366	174.973579590138	1761.02235874422	3.33120422478395	2.16659157038823e-10	Up	1.38258713601634e-11	NA	NA	NA	NA	gi|460373232|ref|XP_004232425.1|//PREDICTED: uncharacterized protein LOC101264778 [Solanum lycopersicum]
BGI_novel_G000202	1069	582.481836731532	1287.49557419612	1.14428250432576	4.51448149134741e-06	Up	5.97376222390164e-07	NA	NA	NA	NA	gi|460385431|ref|XP_004238407.1|//PREDICTED: uncharacterized protein LOC101252388 [Solanum lycopersicum]
Solyc04g078120.3.1	1232	203.20264807187	77.4382152504024	-1.39180159523537	0.0154986784330614	Down	0.0048007312426845	NA	NA	NA	K18477//type IV protein arginine methyltransferase [EC:2.1.1.322]	gi|460384822|ref|XP_004238107.1|//PREDICTED: protein arginine N-methyltransferase 2 [Solanum lycopersicum]
Solyc02g085000.3.1	3029	626.142394999522	1541.17098350372	1.29946423695105	0.00328510195308455	Up	0.000832663384559971	GO:0016021//integral component of membrane	NA	NA	NA	gi|460373234|ref|XP_004232426.1|//PREDICTED: uncharacterized protein LOC101265088 [Solanum lycopersicum]
Solyc02g068900.3.1	1668	428.691504415339	1418.02135250629	1.72586752480975	0.00780693303209987	Up	0.00221217775868582	NA	GO:0003824//catalytic activity	NA	K07393//putative glutathione S-transferase	gi|723676348|ref|XP_010317022.1|//PREDICTED: glutathione S-transferase omega-like 2 isoform X1 [Solanum lycopersicum]
Solyc03g071650.2.1	6546	435.08144151169	206.41242573024	-1.07575565820195	0.000286678384128922	Down	5.57370825859721e-05	NA	NA	NA	K16573//gamma-tubulin complex component 6	gi|723681159|ref|XP_010317986.1|//PREDICTED: protein trichome birefringence-like 10 [Solanum lycopersicum]
Solyc04g014350.1.1	177	14.6657784387867	0.946057401596213	-3.95438211803908	0.00697668727151769	Down	0.00194794355094552	NA	NA	NA	NA	NA
Solyc08g006700.3.1	999	389.849507273796	1216.24015135022	1.64143890641863	3.00319859294974e-05	Up	4.70830970700262e-06	NA	NA	NA	K13356//alcohol-forming fatty acyl-CoA reductase [EC:1.2.1.84]	gi|460397921|ref|XP_004244513.1|//PREDICTED: enhancer of rudimentary homolog [Solanum lycopersicum]
Solyc03g113120.3.1	1765	7.01790519524247	80.6058856066231	3.52177282034005	4.57824723028182e-08	Up	4.19120888533329e-09	NA	NA	NA	K13424//WRKY transcription factor 33;K18834//WRKY transcription factor 1	gi|874507412|ref|NP_001234802.2|//transcription factor WRKY72 [Solanum lycopersicum]
Solyc09g066340.1.1	396	0.353988009456912	5.21533461347547	3.88098742014887	0.0184888733499712	Up	0.00587373891314316	NA	NA	NA	K09286//EREBP-like factor;K14516//ethylene-responsive transcription factor 1	gi|460403745|ref|XP_004247348.1|//PREDICTED: ethylene-responsive transcription factor ERF096-like [Solanum lycopersicum]
Solyc02g092820.3.1	1935	34.8094409382583	143.770107183535	2.04621319168098	0.0198883915203869	Up	0.00639322679557985	NA	NA	NA	K14487//auxin responsive GH3 gene family	gi|460372142|ref|XP_004231891.1|//PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.1 [Solanum lycopersicum]
Solyc01g112080.3.1	1489	656.422392110453	5955.85789465769	3.18161297345066	1.21948584021198e-19	Up	2.35915145023863e-21	NA	NA	NA	K13473//chitin elicitor-binding protein;K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460370493|ref|XP_004231087.1|//PREDICTED: lysM domain-containing GPI-anchored protein 2 [Solanum lycopersicum]
Solyc04g071750.3.1	2292	1034.8529998132	2409.20266768914	1.21912991311952	0.0394608865537822	Up	0.0141484369971981	GO:0005929//cilium	GO:0035091//phosphatidylinositol binding	GO:0061512//protein localization to cilium	K19600//tubby-related protein 1	gi|460384229|ref|XP_004237815.1|//PREDICTED: tubby-like F-box protein 5 [Solanum lycopersicum];gi|970025787|ref|XP_015074203.1|//PREDICTED: tubby-like F-box protein 5 [Solanum pennellii]
Solyc11g022590.1.1	678	18743.0522053613	250.981465040273	-6.22263127183534	1.17383358477631e-08	Down	9.80090662702746e-10	NA	GO:0061135//endopeptidase regulator activity	GO:0010466//negative regulation of peptidase activity	NA	gi|350537105|ref|NP_001233769.1|//uncharacterized protein LOC544001 precursor [Solanum lycopersicum]
Solyc08g006870.3.1	3018	511.74300193959	248.774484785142	-1.04058094358784	0.0151504005071363	Down	0.00468155733577455	NA	GO:0060089//molecular transducer activity	GO:0009314//response to radiation;GO:0023052//signaling	K10523//speckle-type POZ protein	gi|460397957|ref|XP_004244531.1|//PREDICTED: BTB/POZ domain-containing protein NPY1 [Solanum lycopersicum]
Solyc09g090330.3.1	1237	3928.15811216797	1266.90278909935	-1.63254717160952	1.1120793431413e-05	Down	1.59134955953461e-06	GO:0009536//plastid	NA	NA	NA	gi|350535623|ref|NP_001234460.1|//harpin binding protein 1 [Solanum lycopersicum]
Solyc03g006240.3.1	2216	321.37152554438	109.15282419513	-1.55789264890996	0.0472499843822131	Down	0.017520607001426	NA	NA	NA	K21026	gi|460376620|ref|XP_004234095.1|//PREDICTED: GDSL esterase/lipase At5g45910 [Solanum lycopersicum]
Solyc12g096290.2.1	3495	309.828360609556	150.253972115924	-1.0440660789086	0.0240472052534029	Down	0.00797928362776921	GO:0000145//exocyst;GO:0043234//protein complex	NA	GO:0006904//vesicle docking involved in exocytosis;GO:0006887//exocytosis	K19985//exocyst complex component 6	gi|460415447|ref|XP_004253070.1|//PREDICTED: exocyst complex component SEC15A [Solanum lycopersicum];gi|661890171|emb|CDP06230.1|//unnamed protein product [Coffea canephora]
Solyc01g098590.3.1	1151	589.248513102147	6533.31050107065	3.47086608853734	4.46831531781218e-06	Up	5.89768321916391e-07	NA	NA	NA	NA	gi|460368622|ref|XP_004230164.1|//PREDICTED: phosphoglycerate mutase-like protein AT74 [Solanum lycopersicum]
Solyc07g062030.3.1	2783	659.133785565945	228.536615186269	-1.52814599495091	1.03171468075283e-08	Down	8.51814528801069e-10	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460397504|ref|XP_004244307.1|//PREDICTED: fatty-acid-binding protein 3 [Solanum lycopersicum]
BGI_novel_G000383	2838	4.16517502780074	52.5643496937423	3.6576356369465	1.21223899095476e-06	Up	1.44774628262228e-07	NA	NA	NA	K02261//cytochrome c oxidase subunit 2	gi|723735484|ref|XP_010327299.1|//PREDICTED: uncharacterized protein LOC104649534 [Solanum lycopersicum]
Solyc01g110360.3.1	1641	152455.978777171	4515.21927065694	-5.07745286817361	1.222595393929e-80	Down	2.73429713865141e-84	NA	GO:0004332//fructose-bisphosphate aldolase activity;GO:0016832//aldehyde-lyase activity	GO:0006007//glucose catabolic process;GO:0006096//glycolytic process	K01623//fructose-bisphosphate aldolase, class I [EC:4.1.2.13]	gi|460370090|ref|XP_004230887.1|//PREDICTED: fructose-bisphosphate aldolase 1, chloroplastic [Solanum lycopersicum]
Solyc03g115070.1.1	1908	214.519024779474	666.399638068016	1.6352820172708	0.00471807378450211	Up	0.00125215019180166	NA	NA	NA	K07195//exocyst complex component 7	gi|460380617|ref|XP_004236051.1|//PREDICTED: exocyst complex component EXO70B1-like [Solanum lycopersicum]
Solyc01g014270.3.1	993	432.956867460793	91.0065189555948	-2.2501815093593	0.000430388073705527	Down	8.7351388896921e-05	NA	NA	NA	NA	NA
Solyc12g014610.2.1	2333	867.907373068956	402.754373162966	-1.10764082606043	0.00360026559897777	Down	0.000926235021773691	NA	NA	NA	K18835//WRKY transcription factor 2;K13424//WRKY transcription factor 33;K18834//WRKY transcription factor 1	gi|460413051|ref|XP_004251909.1|//PREDICTED: probable WRKY transcription factor 20 isoform X1 [Solanum lycopersicum]
Solyc09g009040.3.1	1649	1748.99299262976	327.231618566722	-2.41814044938382	5.83071028695162e-05	Down	9.69973908254997e-06	GO:0044464//cell part	NA	NA	K00222//Delta14-sterol reductase [EC:1.3.1.70]	gi|902763164|ref|NP_001238799.2|//delta14-sterol reductase [Solanum lycopersicum]
Solyc04g026235.1.1	794	104.61706335781	40.2898528206684	-1.37662973825275	0.00183283625638105	Down	0.000434024479528434	NA	GO:0004672//protein kinase activity	NA	K04424//sterile alpha motif and leucine zipper containing kinase AZK [EC:2.7.11.25];K17535//serine/threonine-protein kinase TNNI3K [EC:2.7.11.1]	gi|970022468|ref|XP_015072533.1|//PREDICTED: serine/threonine-protein kinase STY8-like [Solanum pennellii]
Solyc08g082680.3.1	916	64.8987321788826	9.57131264536461	-2.76140159496128	2.47601694052677e-05	Down	3.8236686240504e-06	NA	NA	NA	K19039//E3 ubiquitin-protein ligase ATL7/58/59 [EC:2.3.2.27]	gi|460399942|ref|XP_004245495.1|//PREDICTED: RING-H2 zinc finger protein RHA4a [Solanum lycopersicum]
Solyc06g072360.3.1	2734	70.3784908140853	31.1020078295621	-1.17812685911051	0.0369796383059696	Down	0.0131113135368415	NA	NA	NA	K14794//ribosomal RNA-processing protein 12;K12309//beta-galactosidase [EC:3.2.1.23]	gi|460391724|ref|XP_004241469.1|//PREDICTED: protein SHOOT GRAVITROPISM 5-like [Solanum lycopersicum]
Solyc01g079820.3.1	779	1909.69772751217	689.829498668795	-1.46903257424966	4.10553876698548e-05	Down	6.61097639532476e-06	NA	GO:0016209//antioxidant activity;GO:0016705//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	GO:0019725//cellular homeostasis;GO:0008152//metabolic process	K03386//peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15];K11187//peroxiredoxin 5, atypical 2-Cys peroxiredoxin [EC:1.11.1.15]	gi|460367118|ref|XP_004229422.1|//PREDICTED: peroxiredoxin-2F, mitochondrial [Solanum lycopersicum]
Solyc04g014280.1.1	291	8.09592831299351	0.459929710097193	-4.13771121579103	0.0111094265185363	Down	0.00328963688196436	NA	NA	NA	K14763//H/ACA ribonucleoprotein complex non-core subunit NAF1	gi|971549383|ref|XP_015163935.1|//PREDICTED: pre-mRNA polyadenylation factor FIP1-like [Solanum tuberosum]
Solyc06g066670.3.1	3289	88.3124820806189	27.3222501637265	-1.69254105893779	0.000864877453944621	Down	0.000189494173038858	NA	GO:0004386//helicase activity;GO:0005488//binding	NA	K11273//chromosome transmission fidelity protein 1 [EC:3.6.4.13]	gi|723709279|ref|XP_010322684.1|//PREDICTED: probable ATP-dependent RNA helicase DDX11 [Solanum lycopersicum]
Solyc03g115000.3.1	3941	1876.19522504586	304.498973679803	-2.62330068279541	2.22315862768832e-10	Down	1.41951346698602e-11	NA	NA	GO:0051513//regulation of monopolar cell growth	NA	gi|460380631|ref|XP_004236058.1|//PREDICTED: protein LONGIFOLIA 2 [Solanum lycopersicum]
Solyc06g065970.1.1	381	1841.28637058448	187.878706637163	-3.29284055052944	0.00532912369058554	Down	0.00143636847348382	NA	NA	NA	K02883//large subunit ribosomal protein L18e;K11855//ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12]	gi|460392356|ref|XP_004241782.1|//PREDICTED: 14 kDa proline-rich protein DC2.15-like [Solanum lycopersicum]
Solyc02g081380.3.1	1236	905.764704751665	3558.82999631242	1.97419479001243	9.58434195824917e-14	Up	3.7046975587835e-15	GO:0016020//membrane	GO:0032561//guanyl ribonucleotide binding	GO:0006810//transport;GO:0035556//intracellular signal transduction	K07889//Ras-related protein Rab-5C	gi|460373730|ref|XP_004232667.1|//PREDICTED: ras-related protein RHN1-like [Solanum lycopersicum]
Solyc10g007670.3.1	767	1601.81724024967	273.696367161958	-2.54906136177161	3.04990236217207e-10	Down	1.99287268558508e-11	NA	NA	NA	NA	gi|460405513|ref|XP_004248220.1|//PREDICTED: uncharacterized protein LOC101254243 [Solanum lycopersicum]
Solyc02g077100.3.1	1868	910.660514906868	2326.30588340241	1.35305557052642	0.00128104537354556	Up	0.000291324654241892	NA	NA	NA	K00145//N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]	gi|460374318|ref|XP_004232958.1|//PREDICTED: phospholipase A1-II 1-like [Solanum lycopersicum]
Solyc01g108330.2.1	805	63.4830108136602	14.8052675041686	-2.10025999498704	0.000563161863525028	Down	0.000117615771631532	NA	NA	NA	NA	gi|460369909|ref|XP_004230799.1|//PREDICTED: uncharacterized protein LOC101244813 [Solanum lycopersicum]
Solyc02g090267.1.1	969	228.014108714728	39.402681121534	-2.53275739099293	0.00311134976265548	Down	0.000785027827024562	NA	NA	NA	K20556;K20618//null	gi|565342168|ref|XP_006338233.1|//PREDICTED: geraniol 8-hydroxylase-like [Solanum tuberosum]
Solyc05g012230.3.1	2144	455.637609093735	44.4039104267755	-3.35912819632872	4.32980917644201e-09	Down	3.39406168855582e-10	NA	NA	NA	K01051//pectinesterase [EC:3.1.1.11]	gi|460386726|ref|XP_004239047.1|//PREDICTED: uncharacterized protein LOC101267310 [Solanum lycopersicum]
Solyc05g054380.2.1	835	14.2385041032624	964.10216536029	6.08131654624403	1.34010658305647e-14	Up	4.59056936718689e-16	NA	NA	GO:0006950//response to stress	K14496//abscisic acid receptor PYR/PYL family	gi|460388284|ref|XP_004239798.1|//PREDICTED: pathogenesis-related protein STH-2-like [Solanum lycopersicum]
Solyc06g035710.1.1	1563	12.5128456842134	103.935701946041	3.05420947445391	0.00404759403561431	Up	0.00105459528511048	NA	GO:0022857//transmembrane transporter activity	GO:0006810//transport	K03327//multidrug resistance protein, MATE family	gi|460390344|ref|XP_004240795.1|//PREDICTED: MATE efflux family protein 5-like [Solanum lycopersicum]
Solyc12g008900.2.1	2101	9.91304342149915	0.678852599174472	-3.86815779195118	0.0229142749502797	Down	0.0075427151515551	NA	GO:0016645//oxidoreductase activity, acting on the CH-NH group of donors;GO:0050662//coenzyme binding	GO:0006725//cellular aromatic compound metabolic process	K00279//cytokinin dehydrogenase [EC:1.5.99.12]	gi|460412568|ref|XP_004251670.1|//PREDICTED: cytokinin dehydrogenase 3 [Solanum lycopersicum]
Solyc01g097810.3.1	2126	6998.70381680822	1967.20365511788	-1.83094143426801	0.000158592103508486	Down	2.91788662187971e-05	GO:0009536//plastid	GO:0016705//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	GO:0016109//tetraterpenoid biosynthetic process	K00514//zeta-carotene desaturase [EC:1.3.5.6]	gi|926234400|ref|NP_001234383.2|//zeta-carotene desaturase, chloroplastic/chromoplastic [Solanum lycopersicum]
Solyc02g068060.3.1	3669	654.771388522611	118.169392184087	-2.47013487973322	0.0055772672323435	Down	0.00151219031787933	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460376261|ref|XP_004233917.1|//PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At3g03770 [Solanum lycopersicum]
Solyc04g076610.2.1	1810	35.7923250714174	491.490341428713	3.77944089611875	2.04933833778098e-07	Up	2.11060154588074e-08	NA	NA	NA	K17279//receptor expression-enhancing protein 5/6	gi|723694730|ref|XP_004238018.2|//PREDICTED: uncharacterized protein LOC101261323 [Solanum lycopersicum]
Solyc07g055670.1.1	714	40.5968188564302	147.277534406374	1.85909879145333	0.00861852395034935	Up	0.00247106330051018	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460395352|ref|XP_004243248.1|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Solanum lycopersicum]
Solyc09g018490.3.1	2306	52.463901932883	4.67618450767541	-3.48792134975889	0.000237636580738039	Down	4.53695604048098e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K14962//COMPASS component SWD2	gi|460401501|ref|XP_004246261.1|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 isoform X1 [Solanum lycopersicum]
Solyc01g011093.1.1	3453	567.148766251273	1317.22761048014	1.21570554098118	2.26666904038076e-05	Up	3.47671950990265e-06	NA	NA	NA	K14802//phospholipid-transporting ATPase [EC:3.6.3.1]	gi|460364942|ref|XP_004228365.1|//PREDICTED: phospholipid-transporting ATPase 3-like [Solanum lycopersicum]
Solyc07g006510.3.1	2641	848.721592594293	2909.52329339807	1.77741950913488	7.60707258404157e-07	Up	8.65960924096576e-08	NA	NA	NA	K05391//cyclic nucleotide gated channel, other eukaryote	gi|460394138|ref|XP_004242662.1|//PREDICTED: probable cyclic nucleotide-gated ion channel 17 [Solanum lycopersicum]
Solyc08g075360.2.1	2378	15.5998748588619	213.931265106094	3.77754098035171	3.9885276917121e-09	Up	3.10126314481566e-10	NA	GO:0005524//ATP binding;GO:0016887//ATPase activity	NA	K06174//ATP-binding cassette, sub-family E, member 1	gi|460400997|ref|XP_004246016.1|//PREDICTED: ABC transporter E family member 2 [Solanum lycopersicum]
Solyc03g019880.3.1	646	1716.64833290679	804.250874503993	-1.09387701900199	0.0109375598752425	Down	0.00323258954267176	NA	NA	NA	NA	gi|460377080|ref|XP_004234323.1|//PREDICTED: UPF0426 protein At1g28150, chloroplastic [Solanum lycopersicum]
BGI_novel_G000334	746	38.7030932463861	4.40293209619714	-3.13591237498146	0.00148817028076984	Down	0.000344362647346771	NA	NA	NA	K01537//Ca2+-transporting ATPase [EC:3.6.3.8];K07428//cytochrome P450, family 4, subfamily X [EC:1.14.14.1];K15639//PHYB activation tagged suppressor 1 [EC:1.14.-.-]	gi|970041958|ref|XP_015082369.1|//PREDICTED: cytochrome P450 CYP72A219-like [Solanum pennellii]
Solyc07g065410.1.1	306	123.268291407865	26.0679111255665	-2.24145485308236	0.00064459433989283	Down	0.000136665148550411	NA	NA	NA	NA	gi|970040622|ref|XP_015081698.1|//PREDICTED: uncharacterized protein LOC107025426 [Solanum pennellii]
Solyc02g078140.3.1	5067	1322.99856164696	3054.74903209442	1.2072423648093	0.0039581519141043	Up	0.00102893064891022	NA	GO:0005524//ATP binding;GO:0004672//protein kinase activity	GO:0006468//protein phosphorylation	K04427//mitogen-activated protein kinase kinase kinase 7 [EC:2.7.11.25];K04424//sterile alpha motif and leucine zipper containing kinase AZK [EC:2.7.11.25];K17535//serine/threonine-protein kinase TNNI3K [EC:2.7.11.1];K04365//B-Raf proto-oncogene serine/threonine-protein kinase [EC:2.7.11.1]	gi|460374169|ref|XP_004232884.1|//PREDICTED: serine/threonine-protein kinase HT1-like [Solanum lycopersicum]
Solyc04g005120.3.1	947	701.757745227136	303.598871312046	-1.2088066544371	0.000277017129931447	Down	5.37451230540176e-05	NA	NA	NA	NA	gi|460382694|ref|XP_004237072.1|//PREDICTED: uncharacterized protein LOC101257460 [Solanum lycopersicum]
Solyc09g009535.1.1	1183	62.1820451627858	468.381211746614	2.91311323323059	0.0141433564333833	Up	0.00432345557291548	NA	NA	NA	NA	gi|460402072|ref|XP_004246538.1|//PREDICTED: uncharacterized protein LOC101261444 [Solanum lycopersicum]
Solyc04g082890.3.1	1301	1846.80806950102	5649.31219616848	1.61304128880943	3.70270903068268e-05	Up	5.91677114005392e-06	NA	NA	NA	K16241//transcription factor HY5	gi|460385555|ref|XP_004238469.1|//PREDICTED: bZIP transcription factor 60 [Solanum lycopersicum]
Solyc10g011680.3.1	395	28.8048387339144	0.991928902832399	-4.85993065239054	0.000272537726280894	Down	5.27643115514748e-05	NA	NA	NA	NA	gi|723733734|ref|XP_010327000.1|//PREDICTED: uncharacterized protein LOC104649450 [Solanum lycopersicum]
Solyc01g105410.3.1	825	1394.49189306545	20202.6448552738	3.8567327252832	3.53943442450804e-15	Up	1.113494354512e-16	NA	NA	NA	K14299//nucleoporin SEH1	gi|969995332|ref|XP_015074412.1|//PREDICTED: protein EXORDIUM-like 2 [Solanum pennellii]
Solyc02g077280.3.1	2445	1453.3858310228	346.646939165105	-2.06787881981211	3.64948565550823e-10	Down	2.42138231206376e-11	GO:0016020//membrane;GO:0044424//intracellular part	GO:0032561//guanyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity;GO:0019843//rRNA binding	GO:0042254//ribosome biogenesis;GO:0009207//purine ribonucleoside triphosphate catabolic process	K03595//GTPase	gi|460374302|ref|XP_004232950.1|//PREDICTED: GTPase Era, mitochondrial [Solanum lycopersicum];gi|970010810|ref|XP_015066309.1|//PREDICTED: GTPase Era [Solanum pennellii]
Solyc09g055183.1.1	1986	159.778828785507	599.127210617299	1.90678609886412	0.000109231894525067	Up	1.92503502800999e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|723729554|ref|XP_010326251.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X2 [Solanum lycopersicum]
Solyc03g005140.2.1	2367	37.2452585325158	7.91182062137545	-2.23497515406207	0.023973972011374	Down	0.00795051546836121	NA	NA	NA	K16055//trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12];K08150//MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13	gi|460376892|ref|XP_004234230.1|//PREDICTED: sugar transport protein 8-like [Solanum lycopersicum]
Solyc00g170200.1.1	384	493.269218229728	3325.07053986803	2.7529377811579	1.33115064951173e-09	Up	9.59115180224456e-11	NA	NA	NA	NA	gi|723754733|ref|XP_004253481.2|//PREDICTED: probable strigolactone esterase D14 homolog [Solanum lycopersicum]
Solyc07g063430.3.1	1904	10540.5417016405	2264.01494907921	-2.21899362285981	1.7995473340505e-06	Down	2.22092635419756e-07	GO:0044464//cell part	NA	NA	K13348//protein Mpv17	gi|460397292|ref|XP_004244201.1|//PREDICTED: uncharacterized protein LOC101247444 [Solanum lycopersicum]
Solyc01g087530.3.1	2853	554.722253043513	1376.02911464383	1.310673489169	0.00992348880023316	Up	0.00289959105058251	GO:0044464//cell part	GO:0008324//cation transmembrane transporter activity	GO:0006812//cation transport	K07238//zinc transporter, ZIP family	gi|460367568|ref|XP_004229645.1|//PREDICTED: putative zinc transporter At3g08650 [Solanum lycopersicum]
Solyc06g068890.1.1	246	0.888744951456043	20.9567035836152	4.55949853411729	0.000672974518050465	Up	0.000143108678450794	NA	NA	NA	NA	NA
Solyc09g011770.3.1	1531	346.857078275617	125.390877172442	-1.46790893729116	0.00428501070139914	Down	0.00112539829290511	NA	NA	NA	K15407//queuine tRNA-ribosyltransferase subunit QTRTD1 [EC:2.4.2.29]	gi|460401728|ref|XP_004246369.1|//PREDICTED: uncharacterized protein LOC101262037 [Solanum lycopersicum]
Solyc02g069610.3.1	935	683.578723747039	1548.6414234707	1.17982373814374	2.32773109689769e-05	Up	3.57732045344759e-06	GO:0016021//integral component of membrane	NA	GO:0006810//transport;GO:0016192//vesicle-mediated transport	NA	gi|565372926|ref|XP_006353036.1|//PREDICTED: vesicle transport protein GOT1B-like [Solanum tuberosum];gi|460374780|ref|XP_004233187.1|//PREDICTED: vesicle transport protein GOT1B-like [Solanum lycopersicum]
Solyc05g054920.3.1	1335	3591.41400959649	8318.60678730965	1.21178995086288	4.08521609234894e-06	Up	5.3600568976697e-07	NA	GO:0000166//nucleotide binding;GO:0008270//zinc ion binding;GO:0003676//nucleic acid binding	NA	K12896//splicing factor, arginine/serine-rich 7	gi|460388198|ref|XP_004239756.1|//PREDICTED: serine/arginine-rich splicing factor RS2Z32-like isoform X1 [Solanum lycopersicum]
Solyc12g070270.2.1	2665	1643.33822497295	359.985378881985	-2.19061922373524	0.000189768993950067	Down	3.54879619296065e-05	NA	NA	NA	K05656//ATP-binding cassette, subfamily B (MDR/TAP), member 9	gi|225470565|ref|XP_002272060.1|//PREDICTED: ABC transporter B family member 26, chloroplastic-like isoform X1 [Vitis vinifera];gi|460414673|ref|XP_004252689.1|//PREDICTED: ABC transporter B family member 26, chloroplastic [Solanum lycopersicum]
Solyc04g009380.2.1	1444	228.507481373223	1227.39214334714	2.42528294854404	1.24539694087407e-09	Up	8.95935625423791e-11	NA	NA	NA	K20031//palmitoyltransferase ZDHHC6 [EC:2.3.1.225];K18932//palmitoyltransferase [EC:2.3.1.225]	gi|460382201|ref|XP_004236828.1|//PREDICTED: protein S-acyltransferase 11 [Solanum lycopersicum]
Solyc02g014860.3.1	3802	572.867014821128	4138.92225320553	2.85298297263072	9.16719104408309e-07	Up	1.06508627122435e-07	NA	NA	GO:0044267//cellular protein metabolic process	K12859//U5 snRNP protein, DIM1 family	gi|460371345|ref|XP_004231500.1|//PREDICTED: uncharacterized protein LOC101265380 [Solanum lycopersicum]
Solyc07g065010.3.1	2431	567.114733939663	276.641278645205	-1.03562419647387	0.00446395985650336	Down	0.0011777213308607	NA	NA	NA	K05399//lipopolysaccharide-binding protein	gi|460397054|ref|XP_004244083.1|//PREDICTED: putative BPI/LBP family protein At1g04970 [Solanum lycopersicum]
Solyc01g096475.1.1	873	1737.27514673958	468.482286882895	-1.89075985743909	0.000254054679479251	Down	4.88734233186379e-05	NA	GO:0015036//disulfide oxidoreductase activity	GO:0019725//cellular homeostasis;GO:0018904//ether metabolic process	K03671//thioredoxin 1	gi|350535789|ref|NP_001234469.1|//thioredoxin-like protein CITRX, chloroplastic [Solanum lycopersicum]
Solyc11g045220.2.1	1994	130.029130735428	63.9809943976163	-1.02311954964577	0.0058694398953655	Down	0.00160431648847157	NA	NA	NA	K20131//Rab5 GDP/GTP exchange factor;K01183//chitinase [EC:3.2.1.14]	gi|460410720|ref|XP_004250768.1|//PREDICTED: pentatricopeptide repeat-containing protein At3g46870 [Solanum lycopersicum]
Solyc01g079800.3.1	1873	496.314618931482	78.187118088868	-2.66625211234708	7.6366756368902e-19	Down	1.59121130200597e-20	NA	GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0004386//helicase activity;GO:0042623//ATPase activity, coupled;GO:0003676//nucleic acid binding	NA	K11594//ATP-dependent RNA helicase DDX3X [EC:3.6.4.13];K12823//ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13];K12614//ATP-dependent RNA helicase DDX6/DHH1 [EC:3.6.4.13];K14778//ATP-dependent RNA helicase DDX49/DBP8 [EC:3.6.4.13]	gi|460367114|ref|XP_004229420.1|//PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic isoform X2 [Solanum lycopersicum];gi|723658741|ref|XP_010322546.1|//PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic isoform X1 [Solanum lycopersicum]
Solyc06g062920.3.1	1807	221.34664815656	3802.7386973459	4.10265937650597	4.88485853549765e-08	Up	4.48646616649255e-09	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|350537699|ref|NP_001234561.1|//auxin-regulated dual specificity cytosolic kinase [Solanum lycopersicum]
Solyc01g107330.3.1	958	3760.06067417235	733.406212395373	-2.35807155040549	2.25610369681016e-05	Down	3.45630915233702e-06	NA	NA	NA	K15223//upstream activation factor subunit UAF30	gi|460369742|ref|XP_004230716.1|//PREDICTED: protein TRI1 [Solanum lycopersicum]
Solyc03g115960.3.1	1341	12.5060069865995	0.770445074353941	-4.02078530859014	0.0170335466690987	Down	0.00533954321529735	NA	NA	NA	K21026;K01188//beta-glucosidase [EC:3.2.1.21];K00679//phospholipid:diacylglycerol acyltransferase [EC:2.3.1.158];K10960//geranylgeranyl reductase [EC:1.3.1.83]	gi|460380531|ref|XP_004236009.1|//PREDICTED: GDSL esterase/lipase At1g74460 [Solanum lycopersicum]
Solyc09g009450.2.1	1542	23.0203735693815	5.82664878739327	-1.98217298822229	0.0321848438246201	Down	0.0111761594256061	NA	NA	NA	NA	gi|922378533|ref|XP_013459505.1|//Myb/SANT-like DNA-binding domain protein [Medicago truncatula]
Solyc02g086050.3.1	3426	425.752517816661	174.982341847783	-1.28280572033761	0.00474071249822678	Down	0.00125886520938451	NA	NA	NA	NA	gi|460373089|ref|XP_004232355.1|//PREDICTED: uncharacterized protein LOC101268051 [Solanum lycopersicum]
Solyc10g055540.2.1	1544	128.625380967354	24.4963575892736	-2.39253619697738	2.06115231804337e-06	Down	2.56683684754097e-07	NA	NA	NA	K04392//Ras-related C3 botulinum toxin substrate 1	gi|723736106|ref|XP_010327413.1|//PREDICTED: uncharacterized protein LOC104649610 [Solanum lycopersicum];gi|970056517|ref|XP_015054864.1|//PREDICTED: uncharacterized protein LOC107001256 [Solanum pennellii]
Solyc04g080920.2.1	1932	926.272018879854	12.7399635839464	-6.18400287396117	1.06188394489155e-10	Down	6.42798392166349e-12	NA	GO:0043169//cation binding;GO:0046872//metal ion binding;GO:0003993//acid phosphatase activity;GO:0016791//phosphatase activity	GO:0016311//dephosphorylation	K14407//cleavage stimulation factor subunit 2	gi|723695916|ref|XP_010320409.1|//PREDICTED: LOW QUALITY PROTEIN: purple acid phosphatase 2-like [Solanum lycopersicum];gi|697114761|ref|XP_009611298.1|//PREDICTED: purple acid phosphatase 2-like [Nicotiana tomentosiformis]
Solyc10g080550.2.1	2253	138.300218335182	23.1802258632627	-2.57683690523578	0.000584267639834212	Down	0.000122568148091059	NA	NA	NA	K04427//mitogen-activated protein kinase kinase kinase 7 [EC:2.7.11.25];K16573//gamma-tubulin complex component 6	gi|460407703|ref|XP_004249290.1|//PREDICTED: protein trichome birefringence-like [Solanum lycopersicum]
Solyc06g048820.1.1	327	437.940098181166	915.425054292218	1.0637082273701	0.0334236823933862	Up	0.0116761126953487	NA	NA	NA	NA	gi|723706819|ref|XP_010322279.1|//PREDICTED: wound-induced protein 1 [Solanum lycopersicum]
Solyc01g111400.3.1	2319	967.680040585975	331.303935674364	-1.54637476338494	0.000789303820543956	Down	0.00017105309425386	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13199//plasminogen activator inhibitor 1 RNA-binding protein;K12663//Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase [EC:5.3.3.-];K01183//chitinase [EC:3.2.1.14]	gi|460370371|ref|XP_004231026.1|//PREDICTED: subtilisin-like protease [Solanum lycopersicum]
Solyc01g100610.3.1	2699	1913.12251051774	517.498721471444	-1.88630205900555	1.6938236377409e-10	Down	1.06258579928356e-11	GO:0031224//intrinsic component of membrane	GO:0022890//inorganic cation transmembrane transporter activity	GO:0006826//iron ion transport	K14685//solute carrier family 40 (iron-regulated transporter), member 1	gi|460368927|ref|XP_004230316.1|//PREDICTED: solute carrier family 40 member 3, chloroplastic [Solanum lycopersicum]
Solyc02g065110.3.1	3603	925.568478271673	224.319885244347	-2.04478221555428	5.1594509831819e-12	Down	2.55395516090114e-13	NA	NA	NA	K11229//mitogen-activated protein kinase kinase kinase [EC:2.7.11.1];K04421//mitogen-activated protein kinase kinase kinase 3 [EC:2.7.11.25]	gi|460375273|ref|XP_004233431.1|//PREDICTED: mitogen-activated protein kinase kinase kinase YODA-like isoform X1 [Solanum lycopersicum];gi|723677289|ref|XP_010317159.1|//PREDICTED: mitogen-activated protein kinase kinase kinase YODA-like isoform X2 [Solanum lycopersicum]
Solyc03g114590.3.1	3633	347.139737329208	1674.16405958347	2.26985248556455	5.01541363710975e-08	Up	4.62278711013885e-09	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process	K08856//serine/threonine kinase 16 [EC:2.7.11.1]	gi|460380689|ref|XP_004236087.1|//PREDICTED: probable serine/threonine-protein kinase DDB_G0291350 [Solanum lycopersicum]
Solyc12g006840.2.1	5962	151.878318107913	5374.58834304881	5.14516642534975	2.74871807401984e-13	Up	1.12395397614424e-14	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K01183//chitinase [EC:3.2.1.14]	gi|565402806|ref|XP_006366861.1|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase CES101 [Solanum tuberosum]
Solyc01g099770.3.1	758	22611.0847906763	48918.6620085893	1.11335473618068	1.94879812759651e-08	Up	1.67290967938525e-09	GO:0044424//intracellular part;GO:0005737//cytoplasm	NA	NA	NA	gi|926657623|ref|NP_001234566.2|//translationally-controlled tumor protein homolog [Solanum lycopersicum]
Solyc04g074100.3.1	932	582.70843080386	2122.15285636184	1.86468248644768	1.64069516260558e-05	Up	2.43694388721923e-06	NA	NA	NA	NA	gi|460384413|ref|XP_004237906.1|//PREDICTED: uncharacterized protein At4g22758-like [Solanum lycopersicum]
Solyc11g044510.2.1	1484	11.1915569061993	0.673581188693571	-4.05441509125343	0.0153237820275303	Down	0.00474255860200478	NA	NA	NA	K04125//gibberellin 2-oxidase [EC:1.14.11.13];K14823//rRNA-processing protein EBP2	gi|460410671|ref|XP_004250745.1|//PREDICTED: uncharacterized protein LOC101250859 [Solanum lycopersicum]
Solyc05g023680.3.1	2269	433.739011802885	1030.95918516662	1.24908810419713	0.00675534476977013	Up	0.00188070933671586	NA	GO:0046872//metal ion binding	NA	K10638//E3 ubiquitin-protein ligase UHRF1 [EC:2.3.2.27]	gi|460387820|ref|XP_004239571.1|//PREDICTED: E3 ubiquitin-protein ligase ORTHRUS 2-like [Solanum lycopersicum]
Solyc08g075520.3.1	3550	1456.28286583725	460.008240248707	-1.66255899942756	1.63171986967538e-09	Down	1.19575117928351e-10	NA	NA	NA	NA	gi|460400967|ref|XP_004246001.1|//PREDICTED: uncharacterized protein LOC101249748 isoform X1 [Solanum lycopersicum]
Solyc03g043760.3.1	3309	1533.17028766968	3255.22292611644	1.08623840170382	7.8703038516179e-06	Up	1.09962284492055e-06	NA	NA	NA	K15193//protein SPT2	gi|723680608|ref|XP_010317770.1|//PREDICTED: protein SPT2 homolog isoform X2 [Solanum lycopersicum];gi|460377724|ref|XP_004234640.1|//PREDICTED: protein SPT2 homolog isoform X1 [Solanum lycopersicum]
Solyc11g009080.2.1	2051	15744.2205876288	3315.67816431303	-2.24744645529076	2.84001984351547e-11	Down	1.58261132624706e-12	GO:0009536//plastid	GO:0016765//transferase activity, transferring alkyl or aryl (other than methyl) groups	GO:0008652//cellular amino acid biosynthetic process	K01626//3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]	gi|806776491|ref|NP_001234415.2|//phospho-2-dehydro-3-deoxyheptonate aldolase 1, chloroplastic [Solanum lycopersicum]
Solyc02g079250.3.1	2007	1050.25722177692	475.831598041778	-1.14221972254701	9.14731554224646e-05	Down	1.58308431723014e-05	NA	GO:0016791//phosphatase activity	NA	K01082//3'(2'), 5'-bisphosphate nucleotidase [EC:3.1.3.7]	gi|460373981|ref|XP_004232790.1|//PREDICTED: putative PAP-specific phosphatase, mitochondrial [Solanum lycopersicum]
Solyc05g014160.3.1	1989	132.65612642604	543.705630441198	2.03513446355679	5.40786094361687e-07	Up	5.99705387345108e-08	GO:0010008//endosome membrane;GO:0005634//nucleus;GO:0016021//integral component of membrane;GO:0005886//plasma membrane	GO:0060089//molecular transducer activity;GO:0005096//GTPase activator activity;GO:0004930//G-protein coupled receptor activity	GO:0007186//G-protein coupled receptor signaling pathway;GO:0009414//response to water deprivation;GO:0042127//regulation of cell proliferation;GO:0043547//positive regulation of GTPase activity;GO:0009737//response to abscisic acid;GO:0010182//sugar mediated signaling pathway;GO:0009749//response to glucose;GO:0023052//signaling	NA	gi|565349594|ref|XP_006341776.1|//PREDICTED: regulator of G-protein signaling 1 isoform X2 [Solanum tuberosum];gi|460386974|ref|XP_004239167.1|//PREDICTED: regulator of G-protein signaling 1 isoform X1 [Solanum lycopersicum];gi|723699065|ref|XP_010320964.1|//PREDICTED: regulator of G-protein signaling 1 isoform X2 [Solanum lycopersicum];gi|970030799|ref|XP_015076685.1|//PREDICTED: regulator of G-protein signaling 1 isoform X2 [Solanum pennellii];gi|697128403|ref|XP_009618252.1|//PREDICTED: regulator of G-protein signaling 1 [Nicotiana tomentosiformis]
Solyc08g045780.3.1	3068	1604.24871899491	58.0694170603652	-4.78797546962022	2.74754799977083e-18	Down	6.06287615873092e-20	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial;K17710//pentatricopeptide repeat domain-containing protein 1	gi|723721229|ref|XP_010324893.1|//PREDICTED: pentatricopeptide repeat-containing protein At3g53170 isoform X1 [Solanum lycopersicum];gi|723721235|ref|XP_004244962.2|//PREDICTED: pentatricopeptide repeat-containing protein At3g53170 isoform X2 [Solanum lycopersicum]
Solyc07g065960.1.1	486	126.524685797961	752.109070403911	2.57152300417073	2.06647302184823e-14	Up	7.27132299323368e-16	NA	GO:0005515//protein binding	NA	K03686//molecular chaperone DnaJ;K01956//carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]	gi|460396914|ref|XP_004244015.1|//PREDICTED: chaperone protein dnaJ 11, chloroplastic-like [Solanum lycopersicum]
Solyc10g054380.2.1	6480	439.510353073628	154.238161885739	-1.51073738614463	3.54115883603895e-08	Down	3.17183714142001e-09	NA	GO:0016829//lyase activity;GO:0008270//zinc ion binding;GO:0003676//nucleic acid binding	NA	K09250//cellular nucleic acid-binding protein;K01623//fructose-bisphosphate aldolase, class I [EC:4.1.2.13]	gi|971586529|ref|XP_015160820.1|//PREDICTED: putative disease resistance protein RGA1 [Solanum tuberosum];gi|698587235|ref|XP_009779127.1|//PREDICTED: fructose-bisphosphate aldolase 1, chloroplastic-like [Nicotiana sylvestris];gi|565389761|ref|XP_006360618.1|//PREDICTED: zinc finger protein GIS2 isoform X1 [Solanum tuberosum]
Solyc06g005800.3.1	2558	671.006212793912	1420.32646874695	1.08182454871559	0.000628608411177146	Up	0.000132994682489991	NA	GO:0043169//cation binding;GO:0016791//phosphatase activity	NA	K06269//serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]	gi|460389484|ref|XP_004240382.1|//PREDICTED: serine/threonine-protein phosphatase PP1 isozyme 1 [Solanum lycopersicum]
Solyc04g078920.3.1	623	315.550750875248	1116.78777760758	1.8234110960451	0.000407509063270037	Up	8.21306659125201e-05	NA	GO:0005496//steroid binding	NA	NA	gi|460384923|ref|XP_004238156.1|//PREDICTED: non-specific lipid-transfer protein-like [Solanum lycopersicum]
Solyc05g010340.3.1	2602	113.050900835822	1241.28371102545	3.45678850604727	4.18127907634995e-18	Up	9.36688804564753e-20	GO:0016021//integral component of membrane	GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0009975//cyclase activity;GO:0016301//kinase activity;GO:0016772//transferase activity, transferring phosphorus-containing groups	GO:0016310//phosphorylation;GO:0006164//purine nucleotide biosynthetic process;GO:0006796//phosphate-containing compound metabolic process	K00876//uridine kinase [EC:2.7.1.48]	gi|460386619|ref|XP_004238995.1|//PREDICTED: uridine-cytidine kinase C [Solanum lycopersicum];gi|565363789|ref|XP_006348612.1|//PREDICTED: uridine-cytidine kinase C [Solanum tuberosum]
Solyc06g066010.3.1	1599	339.958361719019	1467.35066607394	2.10978372587072	6.16399230881368e-11	Up	3.62101232991291e-12	NA	NA	NA	K13153//U11/U12 small nuclear ribonucleoprotein 25 kDa protein;K02109//F-type H+-transporting ATPase subunit b	gi|723710913|ref|XP_010322981.1|//PREDICTED: uncharacterized protein LOC101262527 [Solanum lycopersicum]
Solyc02g090400.3.1	1433	160.030135828806	368.26679424418	1.20240770907008	0.00134433677081628	Up	0.000307672125123451	NA	NA	NA	K14491//two-component response regulator ARR-B family	gi|460375694|ref|XP_004233639.1|//PREDICTED: putative two-component response regulator ARR13 [Solanum lycopersicum]
BGI_novel_G000092	530	45.8851166662365	10.3373506095089	-2.15015979537638	0.00640134283004764	Down	0.00177022373848678	NA	NA	NA	K12447//UDP-sugar pyrophosphorylase [EC:2.7.7.64];K11592//endoribonuclease Dicer [EC:3.1.26.-];K01456//peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase [EC:3.5.1.52]	gi|923821402|ref|XP_013694300.1|//PREDICTED: uncharacterized protein LOC106398265 [Brassica napus]
Solyc03g112130.1.1	957	136.200241922041	3.60066155245113	-5.24132345724358	6.36775301399872e-05	Down	1.06880840249129e-05	NA	NA	NA	K10406//kinesin family member C2/C3	gi|460381063|ref|XP_004236272.1|//PREDICTED: uncharacterized protein LOC101245536 [Solanum lycopersicum]
Solyc06g050730.3.1	2013	439.31150251247	1092.07319904052	1.31375338069237	1.45222595074846e-06	Up	1.75817425377628e-07	NA	NA	NA	K17292//tubulin-specific chaperone A	gi|460390558|ref|XP_004240896.1|//PREDICTED: uncharacterized protein LOC101265648 [Solanum lycopersicum];gi|460390556|ref|XP_004240895.1|//PREDICTED: staphylococcal-like nuclease CAN2 [Solanum lycopersicum]
Solyc08g008445.1.1	810	3.71157532903743	18.9705636476594	2.35365898954129	0.0143284349862071	Up	0.00438964541343508	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K00059//3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]	gi|460398185|ref|XP_004244643.1|//PREDICTED: short-chain type dehydrogenase/reductase-like [Solanum lycopersicum]
Solyc09g011840.1.1	1080	791.798316315609	228.451485328035	-1.79324517703757	1.62066955939234e-07	Down	1.6377050751128e-08	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460401716|ref|XP_004246363.1|//PREDICTED: L-type lectin-domain containing receptor kinase VIII.2 [Solanum lycopersicum]
Solyc12g013890.2.1	1570	1272.07027214879	550.99066547359	-1.20707858777272	0.000566813366257112	Down	0.000118484022587218	NA	NA	NA	NA	gi|460412957|ref|XP_004251862.1|//PREDICTED: uncharacterized protein LOC101251155 [Solanum lycopersicum]
Solyc01g105630.3.1	959	26.9420557389926	1057.60304970227	5.2947944960397	3.98182128063934e-49	Up	6.08523454995575e-52	NA	GO:0046872//metal ion binding;GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	GO:0008152//metabolic process	K02183//calmodulin	gi|460369574|ref|XP_004230637.1|//PREDICTED: calmodulin-like [Solanum lycopersicum]
Solyc04g074900.3.1	3628	190.363271746668	64.4615413510421	-1.56224456476737	0.0209211534583002	Down	0.00678370038518537	GO:0030529//intracellular ribonucleoprotein complex	GO:0005198//structural molecule activity	GO:0010467//gene expression	K02971//small subunit ribosomal protein S21e;K05747//Wiskott-Aldrich syndrome protein;K02184//formin 2	gi|970023352|ref|XP_015073010.1|//PREDICTED: leucine-rich repeat extensin-like protein 5 [Solanum pennellii];gi|460384529|ref|XP_004237963.1|//PREDICTED: 40S ribosomal protein S21-like [Solanum lycopersicum]
Solyc10g076670.2.1	666	3.94987541123369	411.716788440422	6.70370132007136	1.16866542506457e-29	Up	8.75584279252936e-32	NA	NA	NA	K05277//leucoanthocyanidin dioxygenase [EC:1.14.11.19]	gi|723740029|ref|XP_010312367.1|//PREDICTED: leucoanthocyanidin dioxygenase-like, partial [Solanum lycopersicum]
Solyc10g078700.2.1	3864	59.3855292533369	7.64634854283914	-2.9572685566491	0.000443983266155717	Down	9.02927053878631e-05	NA	NA	NA	K20641;K13415//protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1]	gi|460407448|ref|XP_004249164.1|//PREDICTED: squamosa promoter-binding-like protein 9 [Solanum lycopersicum]
Solyc06g068360.3.1	1154	24.1904166462024	161.901510462345	2.74260892229103	1.74640081633284e-08	Up	1.48940102421707e-09	NA	NA	NA	K09286//EREBP-like factor	gi|460393200|ref|XP_004242199.1|//PREDICTED: ethylene-responsive transcription factor ERF003-like [Solanum lycopersicum]
Solyc07g056440.3.1	893	37.8331917155324	205.482612996532	2.44129192829707	1.82411796190736e-06	Up	2.25397012215703e-07	NA	GO:0016765//transferase activity, transferring alkyl or aryl (other than methyl) groups	GO:0009755//hormone-mediated signaling pathway	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|460395245|ref|XP_004243195.1|//PREDICTED: probable glutathione S-transferase [Solanum lycopersicum]
Solyc12g055740.2.1	2179	355.864194517101	803.214958322269	1.17445935438943	0.000133634795731684	Up	2.40988945038724e-05	NA	NA	NA	NA	gi|460414531|ref|XP_004252622.1|//PREDICTED: uncharacterized protein C630.12 [Solanum lycopersicum]
Solyc12g095880.2.1	2258	505.371981802927	1252.75735138353	1.30968941623051	0.000775683813659027	Up	0.000167841230739923	NA	NA	NA	K00850//6-phosphofructokinase 1 [EC:2.7.1.11]	gi|460415512|ref|XP_004253102.1|//PREDICTED: ATP-dependent 6-phosphofructokinase 6-like [Solanum lycopersicum]
Solyc11g073090.1.1	990	14.7043022685111	60.4279498455829	2.03897766742838	0.0188228716213289	Up	0.00599668569209401	NA	GO:0016787//hydrolase activity	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K08734//DNA mismatch repair protein MLH1;K13091//RNA-binding protein 39	gi|723746615|ref|XP_010313551.1|//PREDICTED: putative nuclease HARBI1 [Solanum lycopersicum]
Solyc06g036420.2.1	1850	13.293514556237	438.512638450589	5.04382394173858	5.42812315148715e-15	Up	1.74408906984566e-16	NA	NA	NA	K12795//suppressor of G2 allele of SKP1	gi|723705060|ref|XP_010321983.1|//PREDICTED: protein SGT1 homolog A-like [Solanum lycopersicum]
Solyc05g052240.3.1	985	2048.72544275912	50.2835064629018	-5.34849758824528	3.92791671027602e-23	Down	5.30008144147876e-25	NA	GO:0016872//intramolecular lyase activity	GO:0044249//cellular biosynthetic process	K01859//chalcone isomerase [EC:5.5.1.6]	gi|970026623|ref|XP_015074627.1|//PREDICTED: probable chalcone--flavonone isomerase 3 [Solanum pennellii];gi|723702108|ref|XP_010321455.1|//PREDICTED: probable chalcone--flavonone isomerase 3 [Solanum lycopersicum]
Solyc01g107890.3.1	2928	385.167013144173	96.9373795180785	-1.99035916359076	0.0011383940502606	Down	0.000256312833704556	NA	NA	NA	K10352//myosin heavy chain;K20283//golgin subfamily A member 4	gi|460369839|ref|XP_004230764.1|//PREDICTED: filament-like plant protein 7 [Solanum lycopersicum]
Solyc05g055430.3.1	1261	551.664299375127	21.3289068000986	-4.69290869210026	6.96282447047948e-08	Down	6.61037495389565e-09	NA	NA	NA	K11252//histone H2B	gi|460388111|ref|XP_004239713.1|//PREDICTED: uncharacterized protein LOC101266725 [Solanum lycopersicum]
Solyc08g074390.3.1	3214	359.360810663989	140.486128537311	-1.35500540017445	0.00126382494051294	Down	0.000286984551125869	NA	NA	NA	K19893//glucan endo-1,3-beta-glucosidase 5/6 [EC:3.2.1.39]	gi|460401111|ref|XP_004246072.1|//PREDICTED: glucan endo-1,3-beta-glucosidase 6 [Solanum lycopersicum]
Solyc07g052990.1.1	240	45.2488825052209	144.242288191973	1.6725401202546	0.000213934859487568	Up	4.05015338950857e-05	NA	NA	NA	NA	gi|460395724|ref|XP_004243431.1|//PREDICTED: uncharacterized protein LOC101267719 [Solanum lycopersicum]
Solyc03g117250.3.1	1844	649.854577472753	1395.01987276863	1.10209685676725	0.0009147777671195	Up	0.0002016889254701	NA	NA	NA	K07192//flotillin	gi|525314324|ref|NP_001265995.1|//Hop-interacting protein THI116 [Solanum lycopersicum]
Solyc02g090210.3.1	1659	48.4304066548459	1.32427591681825	-5.19263746847474	6.64229745133649e-06	Down	9.1186750832236e-07	NA	GO:0016787//hydrolase activity	GO:0044238//primary metabolic process	K21026;K01188//beta-glucosidase [EC:3.2.1.21];K00679//phospholipid:diacylglycerol acyltransferase [EC:2.3.1.158];K10960//geranylgeranyl reductase [EC:1.3.1.83]	gi|460372502|ref|XP_004232068.1|//PREDICTED: GDSL esterase/lipase At2g23540 [Solanum lycopersicum]
Solyc12g057000.1.1	1491	213.04236224168	844.67433647514	1.98725488811619	9.12011567088287e-05	Up	1.57769706383507e-05	NA	NA	NA	NA	gi|460414353|ref|XP_004252536.1|//PREDICTED: uncharacterized protein LOC101249533 [Solanum lycopersicum]
Solyc01g091260.3.1	1295	633.762421195341	48.8884703938448	-3.69637594536457	1.58339087424678e-08	Down	1.3415265607436e-09	NA	NA	NA	K15622//myeloid leukemia factor 1	gi|723660643|ref|XP_010325704.1|//PREDICTED: uncharacterized protein LOC101251327 [Solanum lycopersicum]
Solyc11g011360.2.1	997	108.651976844045	869.230280762991	3.00002400999589	2.5427374658957e-08	Up	2.21972981404791e-09	NA	NA	NA	K07766//diphosphoinositol-polyphosphate diphosphatase [EC:3.6.1.52]	gi|460409534|ref|XP_004250193.1|//PREDICTED: nudix hydrolase 18, mitochondrial-like [Solanum lycopersicum]
Solyc02g021680.3.1	1503	2.41595533085148	70.2884490947159	4.8626219366942	3.72948173091425e-07	Up	4.02725084779282e-08	NA	NA	NA	K13425//WRKY transcription factor 22	gi|723667782|ref|XP_010315625.1|//PREDICTED: probable WRKY transcription factor 14 [Solanum lycopersicum]
Solyc09g083320.1.1	507	158.284441410756	429.512434747226	1.44018044665429	4.45856134002819e-06	Up	5.87982332675553e-07	NA	NA	NA	K20359//PRA1 family protein 1	gi|460404439|ref|XP_004247690.1|//PREDICTED: PRA1 family protein D [Solanum lycopersicum]
Solyc02g079570.3.1	2578	325.199971971893	2329.17675468531	2.84042108759617	2.22440830774534e-07	Up	2.30168386100383e-08	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723678216|ref|XP_010317324.1|//PREDICTED: uncharacterized protein LOC101264093 [Solanum lycopersicum]
Solyc01g100380.3.1	1742	6132.54995978803	21904.6583587282	1.8366787264095	5.26250352512721e-08	Up	4.87058157629748e-09	GO:0044432//endoplasmic reticulum part	GO:0030246//carbohydrate binding;GO:0046872//metal ion binding;GO:0005515//protein binding	GO:0044267//cellular protein metabolic process	K08057//calreticulin	gi|460368893|ref|XP_004230299.1|//PREDICTED: calreticulin [Solanum lycopersicum]
Solyc04g008410.2.1	2559	22.2663123404282	0.802159994112223	-4.79482881732908	0.00240532850625995	Down	0.00058725591605795	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial;K14845//RAT1-interacting protein	gi|460382921|ref|XP_004237184.1|//PREDICTED: pentatricopeptide repeat-containing protein At1g03100, mitochondrial [Solanum lycopersicum]
Solyc04g049340.3.1	2819	218.510818562823	62.6382870065272	-1.80258804559282	0.00762648447111271	Down	0.00215507599431584	NA	NA	NA	K03834//tyrosine-specific transport protein	gi|460383943|ref|XP_004237675.1|//PREDICTED: uncharacterized protein LOC101258746 isoform X2 [Solanum lycopersicum];gi|723692820|ref|XP_010319862.1|//PREDICTED: uncharacterized protein LOC101258746 isoform X3 [Solanum lycopersicum]
Solyc11g066410.2.1	1257	7281.25357087726	1783.46625063592	-2.02950293691035	3.91412650546664e-05	Down	6.27503283882959e-06	GO:0043229//intracellular organelle;GO:0044444//cytoplasmic part	NA	NA	K02939//large subunit ribosomal protein L9	gi|460411163|ref|XP_004250984.1|//PREDICTED: 50S ribosomal protein L9, chloroplastic [Solanum lycopersicum]
Solyc06g051410.3.1	1454	81.8295313906922	420.573933470944	2.36166594155873	1.72238542843154e-11	Up	9.17432822882314e-13	NA	GO:0004640//phosphoribosylanthranilate isomerase activity	GO:0006520//cellular amino acid metabolic process;GO:0006568//tryptophan metabolic process	K01817//phosphoribosylanthranilate isomerase [EC:5.3.1.24]	gi|723706185|ref|XP_010322188.1|//PREDICTED: N-(5'-phosphoribosyl)anthranilate isomerase 1, chloroplastic isoform X1 [Solanum lycopersicum];gi|723706195|ref|XP_010322191.1|//PREDICTED: N-(5'-phosphoribosyl)anthranilate isomerase 1, chloroplastic isoform X2 [Solanum lycopersicum]
Solyc11g071320.2.1	870	731.456506333915	328.239045387325	-1.15602521819653	2.17995081968736e-05	Down	3.33070613161565e-06	NA	NA	NA	K02899//large subunit ribosomal protein L27	gi|460411595|ref|XP_004251194.1|//PREDICTED: probable 39S ribosomal protein L27, mitochondrial [Solanum lycopersicum]
Solyc11g072710.2.1	3617	2893.39775857556	415.112523204682	-2.80119030452896	2.76460184998314e-11	Down	1.53782648136125e-12	NA	GO:0060089//molecular transducer activity;GO:0032559//adenyl ribonucleotide binding;GO:0004673//protein histidine kinase activity	GO:0007165//signal transduction;GO:0006464//cellular protein modification process;GO:0006351//transcription, DNA-templated	K20715;K08282//non-specific serine/threonine protein kinase [EC:2.7.11.1]	gi|807201033|ref|NP_001234214.2|//phototropin-1 [Solanum lycopersicum]
Solyc08g067160.3.1	1524	935.611809610577	181.349556516413	-2.3671368547374	3.81010596173399e-05	Down	6.09832823903599e-06	NA	GO:0003824//catalytic activity	NA	K06130//lysophospholipase II [EC:3.1.1.5]	gi|460399339|ref|XP_004245199.1|//PREDICTED: acyl-protein thioesterase 1 homolog 1-like [Solanum lycopersicum]
Solyc03g044430.3.1	2305	363.332085823014	142.184382889876	-1.35352576332262	0.00143702657646706	Down	0.00033081393082826	GO:0044424//intracellular part	GO:0016763//transferase activity, transferring pentosyl groups	GO:0019357//nicotinate nucleotide biosynthetic process;GO:0019359//nicotinamide nucleotide biosynthetic process	K00763//nicotinate phosphoribosyltransferase [EC:6.3.4.21]	gi|460377780|ref|XP_004234666.1|//PREDICTED: nicotinate phosphoribosyltransferase isoform X1 [Solanum lycopersicum];gi|970012687|ref|XP_015067290.1|//PREDICTED: nicotinate phosphoribosyltransferase 1-like [Solanum pennellii]
BGI_novel_G000199	1827	69.5655997183405	2156.3024229986	4.95404165330467	5.19665023111439e-08	Up	4.80188456945452e-09	NA	NA	NA	K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30]	gi|970023298|ref|XP_015072985.1|//PREDICTED: cytochrome P450 81E8-like [Solanum pennellii]
Solyc05g054720.3.1	1395	5270.87377801615	1722.83624438437	-1.61325656427162	4.84435572754359e-10	Down	3.26833303520721e-11	GO:0031224//intrinsic component of membrane	NA	NA	NA	gi|460388230|ref|XP_004239772.1|//PREDICTED: protein TIC 20-I, chloroplastic-like [Solanum lycopersicum]
Solyc06g048865.1.1	2997	102.875289860585	210.850182036097	1.0353217715802	0.0471574091262649	Up	0.0174792484103018	NA	NA	NA	NA	NA
Solyc04g079700.3.1	1673	39.5664907585247	0.940248803950923	-5.39509273879811	1.45245057986189e-05	Down	2.13688028877102e-06	NA	GO:0004683//calmodulin-dependent protein kinase activity	NA	K10260//F-box and WD-40 domain protein 7;K03362//F-box and WD-40 domain protein 1/11;K14963//COMPASS component SWD3;K16794//platelet-activating factor acetylhydrolase IB subunit alpha	gi|460385017|ref|XP_004238202.1|//PREDICTED: myosin heavy chain kinase B-like [Solanum lycopersicum]
Solyc09g097850.1.1	405	87.9198087267817	42.2412574293346	-1.0575354664531	0.0295302017167498	Down	0.0101068403221707	NA	NA	NA	K13899//cystatin-C	gi|723733513|ref|XP_010326957.1|//PREDICTED: cysteine proteinase inhibitor B [Solanum lycopersicum]
Solyc02g083320.3.1	1577	890.951774279509	1896.17759395305	1.0896748435113	1.44476439562086e-06	Up	1.74723777088454e-07	NA	GO:1901363//heterocyclic compound binding;GO:0097159//organic cyclic compound binding	NA	K12897//transformer-2 protein	gi|460373444|ref|XP_004232529.1|//PREDICTED: serine/arginine-rich splicing factor SR45a [Solanum lycopersicum];gi|971539078|ref|XP_015160464.1|//PREDICTED: LOW QUALITY PROTEIN: serine/arginine-rich splicing factor SR45a [Solanum tuberosum]
Solyc05g055080.1.1	300	10.3407104524777	317.00275625878	4.9380881705961	3.20405331598445e-09	Up	2.44830374898171e-10	NA	NA	NA	NA	gi|763815419|gb|KJB82271.1|//hypothetical protein B456_013G186200 [Gossypium raimondii]
Solyc01g108800.3.1	2163	161.193623890586	18.5980115237858	-3.11557439480062	1.6094859207518e-06	Down	1.97076235637008e-07	NA	NA	NA	K05605//3-hydroxyisobutyryl-CoA hydrolase [EC:3.1.2.4]	gi|723665632|ref|XP_010315275.1|//PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase 1-like [Solanum lycopersicum]
Solyc02g067390.3.1	1468	225.738319994944	716.89108523534	1.6671026092942	1.27676500515788e-05	Up	1.84937707247782e-06	NA	NA	NA	NA	gi|460375124|ref|XP_004233357.1|//PREDICTED: protein vip1-like isoform X2 [Solanum lycopersicum]
Solyc10g011810.3.1	933	570.262715513198	2618.1321994722	2.19883933058845	1.75148583715038e-05	Up	2.61730532322047e-06	NA	NA	NA	K13076//Delta8-fatty-acid desaturase [EC:1.14.19.4]	gi|460405208|ref|XP_004248068.1|//PREDICTED: delta(8)-fatty-acid desaturase-like [Solanum lycopersicum]
Solyc10g005310.3.1	1690	383.487044915097	1706.30159596724	2.15362292552983	7.00804403259708e-18	Up	1.62740846589682e-19	NA	NA	NA	K01488//adenosine deaminase [EC:3.5.4.4]	gi|460405874|ref|XP_004248399.1|//PREDICTED: adenosine deaminase-like protein [Solanum lycopersicum]
Solyc04g079047.1.1	3303	2322.0213006022	417.265539257576	-2.47634352387809	3.62632597767526e-14	Down	1.33006737812452e-15	NA	NA	NA	K17193//anthocyanidin 3-O-glucoside 2'''-O-xylosyltransferase [EC:2.4.2.51];K16296//serine carboxypeptidase-like clade I [EC:3.4.16.-]	gi|723695388|ref|XP_010320338.1|//PREDICTED: serine carboxypeptidase-like 17 isoform X2 [Solanum lycopersicum];gi|460384937|ref|XP_004238163.1|//PREDICTED: anthocyanidin 3-O-glucoside 2'''-O-xylosyltransferase-like [Solanum lycopersicum];gi|723695385|ref|XP_010320337.1|//PREDICTED: serine carboxypeptidase-like 13 isoform X1 [Solanum lycopersicum]
Solyc03g078120.3.1	5448	690.084293071033	2511.94406762811	1.86395983927093	1.50622688396027e-06	Up	1.83028911648668e-07	NA	NA	NA	K12581//CCR4-NOT transcription complex subunit 7/8;K13024//inositol-hexakisphosphate/diphosphoinositol-pentakisphosphate 1-kinase [EC:2.7.4.24];K16196//eukaryotic translation initiation factor 2-alpha kinase 4 [EC:2.7.11.1];K15923//alpha-L-fucosidase 2 [EC:3.2.1.51];K08247//methionine S-methyltransferase [EC:2.1.1.12]	gi|460378645|ref|XP_004235079.1|//PREDICTED: NAC domain-containing protein 78-like [Solanum lycopersicum]
Solyc11g072620.1.1	234	4.85473083340399	49.0857678285428	3.33784156907761	1.38366604143936e-05	Up	2.0207259394511e-06	NA	NA	NA	NA	NA
Solyc03g082970.3.1	2631	4377.76070016236	930.880595281621	-2.23352506595224	1.66365116323309e-12	Down	7.66465199700349e-14	GO:0043234//protein complex	GO:0043169//cation binding;GO:0004721//phosphoprotein phosphatase activity	GO:0006464//cellular protein modification process	K04457//protein phosphatase 1A [EC:3.1.3.16];K14803//protein phosphatase PTC2/3 [EC:3.1.3.16]	gi|460378446|ref|XP_004234983.1|//PREDICTED: protein phosphatase 2C 57 [Solanum lycopersicum]
Solyc07g020870.2.1	3468	16.660131503136	622.691853014204	5.22404671038363	2.11178092935887e-42	Up	5.43137334597295e-45	NA	NA	NA	K10260//F-box and WD-40 domain protein 7;K08332//vacuolar protein 8	gi|565348551|ref|XP_006341274.1|//PREDICTED: putative E3 ubiquitin-protein ligase LIN isoform X1 [Solanum tuberosum];gi|723713608|ref|XP_010323417.1|//PREDICTED: putative E3 ubiquitin-protein ligase LIN-1 isoform X2 [Solanum lycopersicum];gi|723713611|ref|XP_010323418.1|//PREDICTED: putative E3 ubiquitin-protein ligase LIN-1 isoform X3 [Solanum lycopersicum];gi|723713605|ref|XP_010323416.1|//PREDICTED: putative E3 ubiquitin-protein ligase LIN-1 isoform X1 [Solanum lycopersicum]
Solyc02g093210.3.1	2263	551.75951679673	103.08930960726	-2.42014487590216	2.55037218536214e-06	Down	3.23787373764107e-07	NA	GO:0042578//phosphoric ester hydrolase activity	NA	NA	gi|723669240|ref|XP_010315965.1|//PREDICTED: PI-PLC X domain-containing protein At5g67130 [Solanum lycopersicum]
Solyc08g006640.3.1	2068	3086.75130117977	13640.9943745603	2.14378765980941	6.82195431228621e-15	Up	2.24024964556588e-16	GO:0009941//chloroplast envelope;GO:0031969//chloroplast membrane;GO:0009706//chloroplast inner membrane	GO:0035250//UDP-galactosyltransferase activity;GO:0046509//1,2-diacylglycerol 3-beta-galactosyltransferase activity;GO:0005488//binding	GO:0006664//glycolipid metabolic process;GO:0009247//glycolipid biosynthetic process;GO:0030258//lipid modification;GO:0009793//embryo development ending in seed dormancy;GO:0010027//thylakoid membrane organization	K03715//1,2-diacylglycerol 3-beta-galactosyltransferase [EC:2.4.1.46]	gi|460397907|ref|XP_004244506.1|//PREDICTED: probable monogalactosyldiacylglycerol synthase, chloroplastic [Solanum lycopersicum];gi|565381428|ref|XP_006357072.1|//PREDICTED: probable monogalactosyldiacylglycerol synthase, chloroplastic [Solanum tuberosum]
Solyc12g036170.2.1	858	4804.96880540078	915.598375946776	-2.39174025581905	6.62848118180515e-14	Down	2.50532276664322e-15	NA	NA	NA	NA	gi|460413712|ref|XP_004252225.1|//PREDICTED: uncharacterized protein LOC101254767 isoform X1 [Solanum lycopersicum]
BGI_novel_G000061	921	4.08846234249389	28.2776528059283	2.79003211649841	0.000424746310434174	Up	8.60480168931614e-05	NA	NA	NA	K18823//soyasaponin III rhamnosyltransferase [EC:2.4.1.273]	gi|565345419|ref|XP_006339794.1|//PREDICTED: putative UDP-rhamnose:rhamnosyltransferase 1 [Solanum tuberosum]
Solyc04g051500.3.1	3199	988.596362816644	3015.29891653624	1.60884752461248	1.02415738709399e-05	Up	1.45866459523115e-06	GO:0031224//intrinsic component of membrane	GO:0015144//carbohydrate transmembrane transporter activity	GO:0008643//carbohydrate transport	K15285//solute carrier family 35, member E3	gi|460383537|ref|XP_004237478.1|//PREDICTED: UDP-galactose transporter 2 [Solanum lycopersicum]
Solyc07g005370.3.1	1671	653.824368527905	10.2777932722992	-5.99130070417206	1.39271066305057e-46	Down	2.49180378061828e-49	NA	NA	NA	NA	gi|460393958|ref|XP_004242574.1|//PREDICTED: S-norcoclaurine synthase-like [Solanum lycopersicum]
Solyc10g083520.2.1	1045	1436.0131915566	509.903932520763	-1.49377163257258	0.00505645785567511	Down	0.00135194469206641	NA	NA	NA	K00850//6-phosphofructokinase 1 [EC:2.7.1.11];K19748//RAB6-interacting golgin	gi|460408036|ref|XP_004249454.1|//PREDICTED: uncharacterized protein LOC101262159 [Solanum lycopersicum]
Solyc05g008130.3.1	1165	114.653849202986	809.338100775636	2.8194577236017	4.13345389600076e-08	Up	3.76244759729903e-09	NA	NA	NA	NA	gi|460386310|ref|XP_004238842.1|//PREDICTED: uncharacterized protein LOC101254087 [Solanum lycopersicum]
Solyc07g056540.3.1	1499	92837.4896395912	16666.6334368296	-2.47774479446478	8.84153626544556e-10	Down	6.22875486122414e-11	NA	GO:0000166//nucleotide binding;GO:0010181//FMN binding;GO:0003824//catalytic activity;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process;GO:0055114//oxidation-reduction process	K11517//(S)-2-hydroxy-acid oxidase [EC:1.1.3.15]	gi|808154224|ref|NP_001294871.1|//peroxisomal (S)-2-hydroxy-acid oxidase GLO1 [Solanum lycopersicum]
Solyc10g079250.2.1	2402	371.509181371418	100.808989804298	-1.88177356632377	2.42929038656886e-05	Down	3.7469821155591e-06	NA	GO:0005524//ATP binding;GO:0003690//double-stranded DNA binding;GO:0042623//ATPase activity, coupled;GO:0004520//endodeoxyribonuclease activity;GO:0000150//recombinase activity;GO:0003697//single-stranded DNA binding;GO:0043566//structure-specific DNA binding;GO:0032559//adenyl ribonucleotide binding;GO:0008094//DNA-dependent ATPase activity;GO:0000400//four-way junction DNA binding	GO:0033554//cellular response to stress;GO:0010212//response to ionizing radiation;GO:0006259//DNA metabolic process;GO:0009408//response to heat;GO:0007005//mitochondrion organization;GO:0042148//strand invasion;GO:0000002//mitochondrial genome maintenance;GO:0006312//mitotic recombination;GO:0000730//DNA recombinase assembly;GO:0031668//cellular response to extracellular stimulus	K03553//recombination protein RecA	gi|999808166|ref|NP_001307305.1|//DNA repair protein recA homolog 2, mitochondrial [Solanum lycopersicum]
Solyc10g084250.1.1	2166	225.527509598614	51.4919662627064	-2.13088415578929	8.10358306022926e-05	Down	1.38553509383001e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|998429164|ref|NP_001307224.1|//clade VIII lectin receptor kinase precursor [Solanum lycopersicum]
Solyc04g053130.3.1	1262	16201.042821076	2234.61973556219	-2.85798542430153	3.21727696147924e-07	Down	3.4249824817298e-08	NA	NA	NA	NA	gi|460383467|ref|XP_004237444.1|//PREDICTED: stress enhanced protein 2, chloroplastic [Solanum lycopersicum]
Solyc02g088340.3.1	5402	566.492217454128	1608.49976656085	1.50558768525742	0.000274747201632759	Up	5.32330383959699e-05	NA	NA	NA	K08819//cyclin-dependent kinase 12/13 [EC:2.7.11.22 2.7.11.23]	gi|460372770|ref|XP_004232198.1|//PREDICTED: probable serine/threonine-protein kinase At1g54610 [Solanum lycopersicum]
Solyc10g047290.2.1	1523	918.617733145613	3392.48446760957	1.88480567136319	0.000224565664399409	Up	4.2660571832505e-05	NA	GO:0004722//protein serine/threonine phosphatase activity	GO:0006470//protein dephosphorylation	K17506//protein phosphatase 1L [EC:3.1.3.16]	gi|970059264|ref|XP_015056360.1|//PREDICTED: probable protein phosphatase 2C 10 isoform X1 [Solanum pennellii];gi|698486633|ref|XP_009790036.1|//PREDICTED: probable protein phosphatase 2C 10 [Nicotiana sylvestris]
Solyc02g077650.2.1	3298	37.2938673124265	81.6321889321065	1.13019973311445	0.00700118088553564	Up	0.00195593598990195	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial	gi|460376098|ref|XP_004233837.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g46100 [Solanum lycopersicum]
Solyc02g070680.3.1	2498	397.671121015057	1237.90624458556	1.63825435101454	1.03179474062921e-06	Up	1.21647784576196e-07	NA	NA	NA	K03189//urease accessory protein	gi|723675766|ref|XP_010316930.1|//PREDICTED: uncharacterized protein At4g18255 [Solanum lycopersicum]
Solyc03g006000.3.1	2930	362.150718361718	1155.1130448308	1.67337190537201	6.79955098372461e-05	Up	1.14609995334735e-05	GO:0043231//intracellular membrane-bounded organelle;GO:0005634//nucleus	GO:0003677//DNA binding;GO:0043565//sequence-specific DNA binding;GO:0003700//transcription factor activity, sequence-specific DNA binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0006355//regulation of transcription, DNA-templated;GO:0050896//response to stimulus;GO:0006351//transcription, DNA-templated	K09419//heat shock transcription factor, other eukaryote	gi|723678746|ref|XP_010317423.1|//PREDICTED: heat stress transcription factor A-4a [Solanum lycopersicum]
Solyc02g078900.3.1	3449	455.395486387169	3848.23070727873	3.07900339594938	3.07758421914731e-11	Up	1.72187785632179e-12	NA	GO:0050136//NADH dehydrogenase (quinone) activity;GO:0050662//coenzyme binding;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process;GO:0055114//oxidation-reduction process	K17871//NADH:ubiquinone reductase (non-electrogenic) [EC:1.6.5.9]	gi|460374037|ref|XP_004232818.1|//PREDICTED: internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial-like [Solanum lycopersicum];gi|697158431|ref|XP_009587975.1|//PREDICTED: internal alternative NAD(P)H-ubiquinone oxidoreductase A2, mitochondrial-like [Nicotiana tomentosiformis]
Solyc07g007050.1.1	360	79.2966166419625	241.038826144229	1.60393433544047	0.00245199348155092	Up	0.000599745833678886	NA	NA	NA	K03768//peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]	gi|723712537|ref|XP_010323260.1|//PREDICTED: uncharacterized protein LOC104648148 [Solanum lycopersicum]
Solyc07g005390.3.1	2109	17092.9605700018	852.891161834429	-4.32489683930599	2.23865655532685e-17	Down	5.55742234176115e-19	GO:0044424//intracellular part	NA	GO:0008152//metabolic process	K00131//glyceraldehyde-3-phosphate dehydrogenase (NADP+) [EC:1.2.1.9]	gi|723712065|ref|XP_010323179.1|//PREDICTED: NADP-dependent glyceraldehyde-3-phosphate dehydrogenase isoform X1 [Solanum lycopersicum]
Solyc04g072890.3.1	2556	145.697094513173	350.317240953299	1.26568988498485	0.0412553697536418	Up	0.0149010188203664	NA	NA	NA	K18643//katanin p80 WD40 repeat-containing subunit B1;K14963//COMPASS component SWD3	gi|565374945|ref|XP_006354002.1|//PREDICTED: uncharacterized WD repeat-containing protein C2A9.03-like [Solanum tuberosum];gi|460384385|ref|XP_004237892.1|//PREDICTED: uncharacterized WD repeat-containing protein C2A9.03 [Solanum lycopersicum]
Solyc03g031830.1.1	903	47.7571139392733	125.78097159842	1.39712612556232	0.0150677110121822	Up	0.0046526359782659	NA	NA	NA	K15688//E3 ubiquitin-protein ligase MUL1 [EC:2.3.2.27]	gi|460377616|ref|XP_004234587.1|//PREDICTED: putative E3 ubiquitin-protein ligase XBAT35 [Solanum lycopersicum]
Solyc11g012060.1.1	858	935.649099939514	416.481050271068	-1.16771671679208	0.00141024627474409	Down	0.000323965550590719	NA	NA	NA	NA	gi|460409646|ref|XP_004250249.1|//PREDICTED: uncharacterized protein LOC101251436 [Solanum lycopersicum]
Solyc10g076660.2.1	1421	241.916489551924	4015.94788086632	4.05315953105475	5.98907588550583e-11	Up	3.50489328815242e-12	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K05933//aminocyclopropanecarboxylate oxidase [EC:1.14.17.4];K05277//leucoanthocyanidin dioxygenase [EC:1.14.11.19]	gi|723737759|ref|XP_010327726.1|//PREDICTED: leucoanthocyanidin dioxygenase isoform X2 [Solanum lycopersicum];gi|460407264|ref|XP_004249074.1|//PREDICTED: leucoanthocyanidin dioxygenase isoform X1 [Solanum lycopersicum]
BGI_novel_G000297	2632	75.6022102375885	2.95300586683035	-4.67817228455014	2.04501950208694e-08	Down	1.76236957239637e-09	NA	NA	NA	K00451//homogentisate 1,2-dioxygenase [EC:1.13.11.5]	gi|565386276|ref|XP_006358956.1|//PREDICTED: LOW QUALITY PROTEIN: homogentisate 1,2-dioxygenase [Solanum tuberosum]
Solyc07g062100.3.1	1216	27.9545262531784	7.27554657159696	-1.9419543568374	0.0454684358269031	Down	0.0167244119852348	NA	GO:0046872//metal ion binding	NA	K11380//NuA3 HAT complex component NTO1	gi|460397496|ref|XP_004244303.1|//PREDICTED: protein Jade-1 [Solanum lycopersicum]
Solyc12g009930.2.1	1356	8159.3624363287	479.11450469332	-4.09001403064975	8.0850050302387e-07	Down	9.26695633963918e-08	NA	NA	NA	K13495//cis-zeatin O-glucosyltransferase [EC:2.4.1.215]	gi|460412717|ref|XP_004251744.1|//PREDICTED: zeatin O-glucosyltransferase-like [Solanum lycopersicum]
Solyc03g005340.3.1	2926	1407.64266585211	489.239016786051	-1.52466977973739	0.000518402367037175	Down	0.000107127729344495	NA	NA	NA	K01303//acylaminoacyl-peptidase [EC:3.4.19.1]	gi|723678565|ref|XP_004234027.2|//PREDICTED: acylamino-acid-releasing enzyme isoform X1 [Solanum lycopersicum];gi|565379264|ref|XP_006356048.1|//PREDICTED: acylamino-acid-releasing enzyme isoform X1 [Solanum tuberosum]
Solyc04g007950.3.1	1545	1362.16728483262	292.042210181216	-2.22165507997666	0.000173669737470479	Down	3.22507317756793e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K16911//ATP-dependent RNA helicase DDX21 [EC:3.6.4.13];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460382414|ref|XP_004236934.1|//PREDICTED: cysteine-rich repeat secretory protein 12 [Solanum lycopersicum]
Solyc01g073680.3.1	921	1413.14859976945	464.726609152837	-1.60445902272512	0.00234399435658892	Down	0.000569922289698431	NA	NA	GO:0051234//establishment of localization	NA	gi|460366948|ref|XP_004229337.1|//PREDICTED: protein YLS3 [Solanum lycopersicum]
Solyc02g093480.3.1	2116	71.5549297101196	586.227209468092	3.03433686299539	6.3334438074299e-13	Up	2.73848025071518e-14	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K03252//translation initiation factor 3 subunit C;K19562//bifunctional dethiobiotin synthetase / adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:6.3.3.3 2.6.1.62];K19995//secretory carrier-associated membrane protein	gi|460372028|ref|XP_004231836.1|//PREDICTED: uncharacterized protein LOC101259386 isoform X1 [Solanum lycopersicum];gi|723669137|ref|XP_010315956.1|//PREDICTED: uncharacterized protein LOC101259386 isoform X2 [Solanum lycopersicum];gi|565343341|ref|XP_006338796.1|//PREDICTED: uncharacterized protein LOC102581795 isoform X1 [Solanum tuberosum]
Solyc06g082010.3.1	3347	2861.74609707447	16349.9443094517	2.5143181391708	3.53451340726792e-05	Up	5.62692215686644e-06	NA	NA	NA	K07560//D-tyrosyl-tRNA(Tyr) deacylase [EC:3.1.-.-];K15172//transcription elongation factor SPT5	gi|460393850|ref|XP_004242521.1|//PREDICTED: zinc finger CCCH domain-containing protein 66-like isoform X1 [Solanum lycopersicum]
Solyc09g010230.2.1	1816	269.274594813567	792.028904556001	1.55647495878685	0.0073652206750044	Up	0.0020741107126755	NA	NA	NA	K09287//RAV-like factor	gi|723727647|ref|XP_004246879.2|//PREDICTED: B3 domain-containing protein At2g36080-like [Solanum lycopersicum]
Solyc07g052780.3.1	601	18.1851870557406	123.054485013516	2.75846157043375	5.91116427191605e-05	Up	9.84679928850187e-06	NA	NA	NA	K03283//heat shock 70kDa protein 1/8;K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13414//mitogen-activated protein kinase kinase kinase 1, plant [EC:2.7.11.25];K19613//leucine-rich repeat protein SHOC2;K14309//nuclear pore complex protein Nup93	gi|970068067|ref|XP_015061155.1|//PREDICTED: TMV resistance protein N-like [Solanum pennellii]
Solyc01g103440.3.1	2194	956.887712255502	312.450421724048	-1.61472235159536	2.01659401141672e-07	Down	2.07236830530636e-08	NA	NA	NA	K01945//phosphoribosylamine--glycine ligase [EC:6.3.4.13]	gi|460369186|ref|XP_004230444.1|//PREDICTED: phosphoribosylamine--glycine ligase [Solanum lycopersicum]
Solyc02g061745.1.1	2597	1257.57394350838	441.963244132781	-1.50864493287827	5.66316819564792e-07	Down	6.30319823773844e-08	GO:0016021//integral component of membrane	GO:0015238//drug transmembrane transporter activity;GO:0015297//antiporter activity	GO:0006855//drug transmembrane transport	K20456//oxysterol-binding protein 1	gi|460375567|ref|XP_004233576.1|//PREDICTED: MATE efflux family protein 3, chloroplastic-like [Solanum lycopersicum]
Solyc09g066440.3.1	2206	694.670905458585	1435.24414338605	1.04689458854288	0.000466064233474646	Up	9.53218446800129e-05	NA	NA	NA	K08960//casein kinase 1, epsilon [EC:2.7.11.1]	gi|460403520|ref|XP_004247238.1|//PREDICTED: casein kinase I-like [Solanum lycopersicum]
Solyc01g097880.3.1	1162	1751.52580046453	6260.81873770689	1.83773909353361	1.84398829602174e-06	Up	2.27921022424635e-07	GO:0005829//cytosol	GO:0008270//zinc ion binding;GO:0047974//guanosine deaminase activity	GO:0006152//purine nucleoside catabolic process	K12951//cation-transporting P-type ATPase D [EC:3.6.3.-];K11991//tRNA(adenine34) deaminase [EC:3.5.4.33]	gi|460368541|ref|XP_004230124.1|//PREDICTED: tRNA(adenine(34)) deaminase, chloroplastic [Solanum lycopersicum]
Solyc07g007020.3.1	3009	183.249805308572	17.2276644436638	-3.41101263197784	7.66661529633943e-06	Down	1.06849092712886e-06	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723712526|ref|XP_010323256.1|//PREDICTED: wall-associated receptor kinase-like 1 isoform X1 [Solanum lycopersicum]
Solyc01g007910.3.1	1534	1642.17301715145	5478.20023501335	1.73809586375781	2.51047503419532e-06	Up	3.18254271332126e-07	GO:0043231//intracellular membrane-bounded organelle	GO:0032559//adenyl ribonucleotide binding;GO:0046912//transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer;GO:0004774//succinate-CoA ligase activity	GO:0043648//dicarboxylic acid metabolic process;GO:0006732//coenzyme metabolic process;GO:0009060//aerobic respiration	K01899//succinyl-CoA synthetase alpha subunit [EC:6.2.1.4 6.2.1.5]	gi|807201080|ref|NP_001234277.2|//succinyl-CoA ligase [ADP-forming] subunit alpha-1, mitochondrial [Solanum lycopersicum]
Solyc07g043570.3.1	1461	4927.51643294313	1253.90868868183	-1.97442838959919	2.84586247493913e-06	Down	3.64484250182304e-07	NA	GO:0004033//aldo-keto reductase (NADP) activity	GO:0008152//metabolic process	K05275//pyridoxine 4-dehydrogenase [EC:1.1.1.65]	gi|460396131|ref|XP_004243632.1|//PREDICTED: uncharacterized oxidoreductase At1g06690, chloroplastic [Solanum lycopersicum]
Solyc04g007340.3.1	1422	269.273322056874	1028.31935447622	1.93314516826478	1.69508791719164e-05	Up	2.52291861239982e-06	NA	NA	NA	NA	gi|460382534|ref|XP_004236994.1|//PREDICTED: uncharacterized protein LOC101257950 [Solanum lycopersicum]
Solyc04g080130.3.1	2238	189.555001082694	1000.52816452252	2.40007335403202	6.27620414799838e-06	Up	8.57164604080292e-07	NA	NA	NA	K14794//ribosomal RNA-processing protein 12;K12309//beta-galactosidase [EC:3.2.1.23]	gi|460385096|ref|XP_004238241.1|//PREDICTED: zinc finger protein NUTCRACKER-like [Solanum lycopersicum]
Solyc02g021000.3.1	1084	3277.50097874794	457.476410976156	-2.84082695105974	6.54724654945914e-13	Down	2.83580605728028e-14	NA	NA	NA	K02221//YggT family protein	gi|460371396|ref|XP_004231525.1|//PREDICTED: uncharacterized protein LOC101254143 isoform X1 [Solanum lycopersicum]
Solyc04g009940.3.1	1328	1629.64109480635	604.325354876486	-1.43115688878578	0.0150803490301881	Down	0.00465766259371323	NA	NA	NA	K01620//threonine aldolase [EC:4.1.2.48];K02327//DNA polymerase delta subunit 1 [EC:2.7.7.7]	gi|970020414|ref|XP_015071438.1|//PREDICTED: uncharacterized protein LOC107015625 isoform X1 [Solanum pennellii];gi|460382127|ref|XP_004236791.1|//PREDICTED: uncharacterized protein LOC101248473 [Solanum lycopersicum]
Solyc11g006040.2.1	3073	1104.85976692964	95.5045874688508	-3.53214942533355	2.06416868727054e-06	Down	2.57263861723126e-07	GO:0031224//intrinsic component of membrane	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process	K00924	gi|460408965|ref|XP_004249911.1|//PREDICTED: probable receptor protein kinase TMK1 [Solanum lycopersicum]
BGI_novel_G000269	588	15.7823606069256	2.49588889180177	-2.66068739194468	0.0294809139041714	Down	0.0100833780372997	NA	NA	NA	NA	gi|567863706|ref|XP_006424507.1|//hypothetical protein CICLE_v10029681mg [Citrus clementina]
Solyc03g117675.1.1	1883	669.205904725834	4501.08833551269	2.74975179828377	6.43089841928188e-15	Up	2.09025772387573e-16	NA	NA	NA	NA	gi|460380280|ref|XP_004235885.1|//PREDICTED: uncharacterized protein LOC101254582 isoform X1 [Solanum lycopersicum];gi|723686171|ref|XP_010318696.1|//PREDICTED: uncharacterized protein LOC101254582 isoform X2 [Solanum lycopersicum]
Solyc09g074880.3.1	1706	1583.21494647457	262.651511428495	-2.59163534582706	2.814059772629e-20	Down	5.01165518601445e-22	NA	NA	NA	NA	gi|460403926|ref|XP_004247437.1|//PREDICTED: protein LOW PSII ACCUMULATION 1, chloroplastic [Solanum lycopersicum]
Solyc06g075667.1.1	1864	41.7834109874945	15.5054891820227	-1.43015122938525	0.0446983488611344	Down	0.0164028345213161	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial;K01601//ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39];K17710//pentatricopeptide repeat domain-containing protein 1	gi|970001921|ref|XP_015060073.1|//PREDICTED: uncharacterized protein LOC107005912 isoform X4 [Solanum pennellii];gi|723730227|ref|XP_010326337.1|//PREDICTED: uncharacterized protein LOC101253719 isoform X3 [Solanum lycopersicum];gi|970001913|ref|XP_015060046.1|//PREDICTED: uncharacterized protein LOC107005912 isoform X1 [Solanum pennellii]
Solyc06g069565.1.1	1832	24.7515017135785	55.9120913002079	1.17564424913617	0.0269186963525157	Up	0.00909807836168254	NA	NA	NA	NA	gi|723708655|ref|XP_004242182.2|//PREDICTED: uncharacterized protein LOC101261242 [Solanum lycopersicum]
Solyc09g015930.3.1	2527	2413.7998602185	1151.52399551858	-1.06776158585147	0.000144070443243177	Down	2.617412182672e-05	NA	GO:0000166//nucleotide binding;GO:0017111//nucleoside-triphosphatase activity	NA	K12823//ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]	gi|723726769|ref|XP_010325759.1|//PREDICTED: DEAD-box ATP-dependent RNA helicase 20-like isoform X1 [Solanum lycopersicum];gi|460401539|ref|XP_004246279.1|//PREDICTED: DEAD-box ATP-dependent RNA helicase 20-like isoform X2 [Solanum lycopersicum]
Solyc06g071540.3.1	3496	182.751620822074	614.856255567311	1.75036496731366	7.63838759878133e-06	Up	1.06398741824384e-06	NA	NA	NA	NA	gi|460391825|ref|XP_004241519.1|//PREDICTED: uncharacterized protein LOC101260442 [Solanum lycopersicum]
Solyc06g069030.3.1	1341	4011.72406626071	937.905190186588	-2.09670838032049	8.10916915688427e-11	Down	4.82415162307563e-12	NA	NA	NA	K12825//splicing factor 3A subunit 1	gi|460392059|ref|XP_004241635.1|//PREDICTED: uncharacterized protein LOC101244674 [Solanum lycopersicum];gi|970037274|ref|XP_015079985.1|//PREDICTED: uncharacterized protein LOC107023719 [Solanum pennellii]
Solyc01g080590.3.1	2209	777.669802011029	157.618526388973	-2.30272059974958	4.16680610744161e-10	Down	2.7832550113819e-11	NA	NA	NA	NA	gi|969997419|ref|XP_015067793.1|//PREDICTED: uncharacterized protein LOC107012451 [Solanum pennellii];gi|723659009|ref|XP_010322997.1|//PREDICTED: uncharacterized protein LOC101245492 [Solanum lycopersicum]
Solyc02g090120.1.1	261	1.3407963397593	35.5894641475127	4.73028819023078	0.000105636649079132	Up	1.85537457306124e-05	NA	NA	NA	NA	gi|698485511|ref|XP_009789527.1|//PREDICTED: uncharacterized protein LOC104237137 [Nicotiana sylvestris]
Solyc12g088820.2.1	4622	251.470759415235	51.9383713321913	-2.2755179754586	3.07914176062783e-06	Down	3.97116091090364e-07	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process	K08790//serine/threonine kinase 38 [EC:2.7.11.1]	gi|460414831|ref|XP_004252766.1|//PREDICTED: serine/threonine-protein kinase 38-like [Solanum lycopersicum]
Solyc06g062550.4.1	1236	364.973946922467	12.6085476215868	-4.85531947687657	0.00168259216179426	Down	0.000393930273156021	NA	GO:0042578//phosphoric ester hydrolase activity;GO:0016791//phosphatase activity	GO:0016311//dephosphorylation;GO:0006796//phosphate-containing compound metabolic process	K13248//pyridoxal phosphate phosphatase PHOSPHO2 [EC:3.1.3.74]	gi|926657587|ref|NP_001234501.2|//psi14A protein [Solanum lycopersicum]
Solyc06g009710.3.1	639	4.42550953210873	0.393627233273268	-3.49094162706685	0.0437570526267672	Down	0.015987117673244	GO:0043231//intracellular membrane-bounded organelle	GO:0003676//nucleic acid binding	NA	K09422//myb proto-oncogene protein, plant	gi|460390046|ref|XP_004240653.1|//PREDICTED: transcription factor MYB32-like [Solanum lycopersicum]
Solyc12g056830.1.1	753	15244.071557734	2484.33407803415	-2.61731718897296	5.39741805288136e-15	Down	1.73221147440393e-16	GO:0033178//proton-transporting two-sector ATPase complex, catalytic domain;GO:0009534//chloroplast thylakoid	GO:0015078//hydrogen ion transmembrane transporter activity	GO:0006754//ATP biosynthetic process;GO:0006818//hydrogen transport	K02113//F-type H+-transporting ATPase subunit delta	gi|460414390|ref|XP_004252554.1|//PREDICTED: ATP synthase delta chain, chloroplastic [Solanum lycopersicum]
Solyc01g087740.1.1	2310	77.7360657655371	24.8936086769433	-1.64280871018801	0.00205280752435168	Down	0.000491547470420277	NA	GO:0004175//endopeptidase activity;GO:0005515//protein binding	GO:0044092//negative regulation of molecular function;GO:0019538//protein metabolic process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13199//plasminogen activator inhibitor 1 RNA-binding protein;K12663//Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase [EC:5.3.3.-];K01183//chitinase [EC:3.2.1.14]	gi|460367601|ref|XP_004229661.1|//PREDICTED: subtilisin-like protease [Solanum lycopersicum]
Solyc05g052790.3.1	1343	411.415238717975	2484.54891801386	2.59431681020351	8.09828775035791e-14	Up	3.10009748010197e-15	GO:0031224//intrinsic component of membrane	NA	NA	K15283//solute carrier family 35, member E1;K15285//solute carrier family 35, member E3;K15286	gi|991820231|ref|NP_001307026.1|//nucleotide-sugar transporter family protein [Solanum lycopersicum]
Solyc02g077780.3.1	2320	603.700579064432	2801.21954881891	2.21414997064992	3.35052709921183e-05	Up	5.32277713465067e-06	NA	NA	NA	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4;K01183//chitinase [EC:3.2.1.14]	gi|460374225|ref|XP_004232912.1|//PREDICTED: MACPF domain-containing protein NSL1 [Solanum lycopersicum]
Solyc03g078515.1.1	997	20.2626215865469	124.93327263922	2.62426500357533	4.92931446947191e-07	Up	5.42761105666469e-08	NA	NA	NA	NA	gi|970040051|ref|XP_015081384.1|//PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like [Solanum pennellii]
Solyc02g078230.2.1	10231	1668.55796430928	409.105350147645	-2.02805749584907	3.06689490927743e-09	Down	2.33320877808082e-10	GO:0016021//integral component of membrane;GO:0000148//1,3-beta-D-glucan synthase complex	GO:0003843//1,3-beta-D-glucan synthase activity	GO:0006075//(1->3)-beta-D-glucan biosynthetic process	K11000//callose synthase [EC:2.4.1.-]	gi|697192393|ref|XP_009605284.1|//PREDICTED: callose synthase 11-like [Nicotiana tomentosiformis];gi|460374151|ref|XP_004232875.1|//PREDICTED: callose synthase 11-like [Solanum lycopersicum]
Solyc05g005080.3.1	4053	4740.41101134474	2353.92232720564	-1.00994543530004	0.00422759301672486	Down	0.00110826978107298	NA	GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds	GO:0044238//primary metabolic process	K01179//endoglucanase [EC:3.2.1.4]	gi|981220794|ref|NP_001306054.1|//endoglucanase 25-like [Solanum lycopersicum]
Solyc12g042730.1.1	519	11.8334007000643	55.0912844264169	2.21895936194355	0.000109101945823106	Up	1.92233822091033e-05	NA	NA	NA	NA	gi|460414247|ref|XP_004252484.1|//PREDICTED: uncharacterized protein DDB_G0288805-like [Solanum lycopersicum]
Solyc05g009270.3.1	1705	431.691350119124	54.9137802772076	-2.9747600502664	0.00709777015527392	Down	0.00198874080278791	GO:0044464//cell part	GO:0016747//transferase activity, transferring acyl groups other than amino-acyl groups	GO:0006631//fatty acid metabolic process	K15397//3-ketoacyl-CoA synthase [EC:2.3.1.199]	gi|460386472|ref|XP_004238922.1|//PREDICTED: 3-ketoacyl-CoA synthase 6 [Solanum lycopersicum]
Solyc01g097510.3.1	1658	248.824467943708	932.25271228295	1.90559273072035	5.43709130851437e-07	Up	6.03535780406881e-08	NA	NA	NA	K17095//annexin A7/11;K17099//annexin A13	gi|565362060|ref|XP_006347770.1|//PREDICTED: annexin D3-like isoform X2 [Solanum tuberosum];gi|723662061|ref|XP_010327723.1|//PREDICTED: annexin D3-like isoform X1 [Solanum lycopersicum]
Solyc01g105080.2.1	2029	0.419605733190655	34.8586021894967	6.37633651913555	9.78690706926301e-07	Up	1.14511336254721e-07	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460371030|ref|XP_004231349.1|//PREDICTED: probable inactive receptor kinase At2g26730 [Solanum lycopersicum]
Solyc05g015725.1.1	573	21.9349626695858	94.684705099929	2.10989914759327	2.22485062134905e-05	Up	3.40511281171135e-06	GO:0043231//intracellular membrane-bounded organelle	GO:0003677//DNA binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0006351//transcription, DNA-templated	K09264//MADS-box transcription factor, plant	gi|460387116|ref|XP_004239235.1|//PREDICTED: agamous-like MADS-box protein AGL27 [Solanum lycopersicum]
Solyc02g084240.3.1	1032	637.962372302373	3142.43603322985	2.30034013781859	0.000535576660099382	Up	0.000111135950006458	NA	NA	NA	K11275//histone H1/5	gi|970012436|ref|XP_015067158.1|//PREDICTED: histone H1 [Solanum pennellii]
Solyc02g079770.3.1	1284	4939.24831693548	1780.45155618214	-1.47204831858909	0.000152106918773078	Down	2.78439346240714e-05	GO:0009536//plastid	NA	NA	K00655//1-acyl-sn-glycerol-3-phosphate acyltransferase [EC:2.3.1.51];K00434//L-ascorbate peroxidase [EC:1.11.1.11];K01148//poly(A)-specific ribonuclease [EC:3.1.13.4]	gi|970011705|ref|XP_015066777.1|//PREDICTED: DAG protein, chloroplastic [Solanum pennellii]
Solyc06g075335.1.1	1083	25.346768032405	192.727607790009	2.92668954325403	0.000198273506994304	Up	3.7248340362729e-05	NA	NA	NA	K13944;K14491//two-component response regulator ARR-B family	gi|970035488|ref|XP_015079078.1|//PREDICTED: LOB domain-containing protein 1-like [Solanum pennellii];gi|697143797|ref|XP_009626018.1|//PREDICTED: LOB domain-containing protein 1-like [Nicotiana tomentosiformis]
Solyc10g012370.3.1	1421	252.40716642789	3865.44800004923	3.93681085269972	5.95183795851923e-27	Up	5.50192266927378e-29	NA	GO:0048037//cofactor binding;GO:0016835//carbon-oxygen lyase activity	GO:0000097//sulfur amino acid biosynthetic process;GO:0006563//L-serine metabolic process	K13034//L-3-cyanoalanine synthase/ cysteine synthase [EC:2.5.1.47 4.4.1.9]	gi|723733606|ref|XP_010326974.1|//PREDICTED: bifunctional L-3-cyanoalanine synthase/cysteine synthase 1, mitochondrial [Solanum lycopersicum]
Solyc02g091100.3.1	2387	1601.22668913746	11724.536917999	2.87228146909627	5.54863369891198e-09	Up	4.41382994810417e-10	NA	GO:0046872//metal ion binding;GO:0019842//vitamin binding;GO:0003824//catalytic activity	NA	K12261//2-hydroxyacyl-CoA lyase 1 [EC:4.1.-.-]	gi|460372397|ref|XP_004232017.1|//PREDICTED: 2-hydroxyacyl-CoA lyase [Solanum lycopersicum]
Solyc07g007310.3.1	1372	1632.22755447077	508.711336658448	-1.68192305221548	1.16472401648462e-08	Down	9.70748062046967e-10	NA	NA	NA	K06185//ATP-binding cassette, subfamily F, member 2;K03183//demethylmenaquinone methyltransferase / 2-methoxy-6-polyprenyl-1,4-benzoquinol methylase [EC:2.1.1.163 2.1.1.201]	gi|460394254|ref|XP_004242719.1|//PREDICTED: uncharacterized methyltransferase At2g41040, chloroplastic [Solanum lycopersicum]
Solyc12g056750.2.1	1477	1.78904950274837	47.4864299658326	4.7302500861036	7.52678015983976e-08	Up	7.19628414715558e-09	NA	NA	NA	K18835//WRKY transcription factor 2	gi|723751811|ref|XP_004252561.2|//PREDICTED: probable WRKY transcription factor 51 [Solanum lycopersicum]
Solyc10g009500.3.1	1179	11.4509661124909	0.406109051625693	-4.81745832936036	0.00137312249333035	Down	0.000314720821957966	NA	NA	NA	K08695//anthocyanidin reductase [EC:1.3.1.77];K13082//bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase [EC:1.1.1.219 1.1.1.234]	gi|723735184|ref|XP_010327252.1|//PREDICTED: anthocyanidin reductase-like [Solanum lycopersicum]
Solyc03g111793.1.1	1917	1056.59811978888	7302.2448589732	2.78891329831697	0.00107517849342417	Up	0.000240740912852206	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity;GO:0004871//signal transducer activity	GO:0006464//cellular protein modification process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|985482018|ref|NP_001306257.1|//leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1 precursor [Solanum lycopersicum]
Solyc07g063165.1.1	2919	38.849370719991	84.300121278103	1.11764347657163	0.0322241540835763	Up	0.0111946144348789	NA	NA	NA	K10418//dynein light chain LC8-type	gi|460397624|ref|XP_004244367.1|//PREDICTED: dynein light chain, cytoplasmic-like [Solanum lycopersicum];gi|460397346|ref|XP_004244228.1|//PREDICTED: PH domain-containing protein YHR131C-like [Solanum lycopersicum]
Solyc06g076300.3.1	2624	239.518186673774	3070.28904082081	3.68016736967439	4.48603847092745e-20	Up	8.32729669942548e-22	NA	NA	NA	K07025//putative hydrolase of the HAD superfamily	gi|723707106|ref|XP_010322341.1|//PREDICTED: uncharacterized protein C24B11.05-like isoform X1 [Solanum lycopersicum];gi|723707109|ref|XP_010322342.1|//PREDICTED: uncharacterized protein C24B11.05-like isoform X2 [Solanum lycopersicum]
Solyc07g045440.1.1	1230	3119.17247658872	399.770248590382	-2.96392031564741	2.29044808635948e-07	Down	2.37599411970271e-08	NA	NA	NA	K19519//transforming growth factor-beta-induced protein	gi|723716188|ref|XP_010323900.1|//PREDICTED: fasciclin-like arabinogalactan protein 2 [Solanum lycopersicum]
Solyc04g064880.3.1	879	38.3537300542109	1323.17760370585	5.10849601790422	1.08589091823331e-09	Up	7.72687402306314e-11	NA	NA	NA	NA	gi|460384086|ref|XP_004237745.1|//PREDICTED: pathogen-related protein [Solanum lycopersicum]
Solyc01g108250.3.1	2400	87.8170720290493	2160.04359936859	4.62041518916121	6.85466867349018e-18	Up	1.5892365867418e-19	NA	NA	NA	NA	gi|928192541|ref|NP_001234399.2|//Dem2 protein [Solanum lycopersicum]
Solyc06g048540.3.1	1564	4051.5119575077	1312.83888694916	-1.62577052054904	3.72317311131735e-08	Down	3.35707311625043e-09	NA	GO:0032559//adenyl ribonucleotide binding;GO:0042626//ATPase activity, coupled to transmembrane movement of substances	GO:0051234//establishment of localization;GO:0009207//purine ribonucleoside triphosphate catabolic process	K09013//Fe-S cluster assembly ATP-binding protein	gi|460390441|ref|XP_004240842.1|//PREDICTED: ABC transporter I family member 6, chloroplastic [Solanum lycopersicum]
Solyc08g076540.3.1	1563	2237.49618235493	4999.80837724785	1.15998758235503	1.79533172776945e-05	Up	2.69152535004053e-06	GO:0044464//cell part	GO:0005515//protein binding	GO:0015031//protein transport	K08489//syntaxin 16;K08488//syntaxin 7	gi|460400857|ref|XP_004245948.1|//PREDICTED: syntaxin-22-like [Solanum lycopersicum]
Solyc01g110310.3.1	1438	1778.39419432006	7755.92132749186	2.12472302576589	1.10355150715752e-14	Up	3.71442899568823e-16	NA	NA	NA	K17895//GATA-binding protein 3	gi|460370192|ref|XP_004230938.1|//PREDICTED: GATA transcription factor 5 [Solanum lycopersicum]
Solyc08g083040.3.1	5005	3212.14702424386	11327.9382383441	1.81827547120943	5.81977843852753e-06	Up	7.89405611219685e-07	NA	NA	NA	K08835//serine/threonine-protein kinase OSR1/STK39 [EC:2.7.11.1]	gi|723723792|ref|XP_010325326.1|//PREDICTED: serine/threonine-protein kinase fray2 isoform X2 [Solanum lycopersicum]
Solyc06g060700.1.1	429	58.7596801599315	1384.21375110584	4.55809638872016	5.26562652970343e-10	Up	3.57806663323742e-11	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|970032109|ref|XP_015077352.1|//PREDICTED: non-functional pseudokinase ZED1-like [Solanum pennellii]
Solyc02g077750.3.1	1241	768.03714792398	2132.88465836136	1.47355795297509	2.51463092334609e-07	Up	2.62448433926086e-08	NA	NA	NA	K15697//RING finger protein 114 [EC:2.3.2.27]	gi|723674815|ref|XP_010316769.1|//PREDICTED: protein DEHYDRATION-INDUCED 19-like [Solanum lycopersicum]
Solyc12g014110.2.1	2356	273.91868396869	625.308861807602	1.1908212876095	0.00128546535903745	Up	0.000292439442353178	GO:0016020//membrane	NA	NA	K07300//Ca2+:H+ antiporter	gi|970065721|ref|XP_015059823.1|//PREDICTED: uncharacterized protein LOC107005691 [Solanum pennellii];gi|460412997|ref|XP_004251882.1|//PREDICTED: uncharacterized protein LOC101257045 [Solanum lycopersicum]
Solyc12g098410.2.1	974	29.2421784951256	1.50718326149175	-4.27812404079593	0.000125361608600995	Down	2.24434100980535e-05	NA	NA	NA	K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6];K19891//glucan endo-1,3-beta-glucosidase 1/2/3 [EC:3.2.1.39]	gi|460415290|ref|XP_004252992.1|//PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3-like [Solanum lycopersicum]
Solyc08g083350.3.1	2848	7632.33542109037	2189.93751364585	-1.8012348699686	0.000162712586248083	Down	3.00218913794547e-05	NA	NA	NA	K02867//large subunit ribosomal protein L11	gi|460399833|ref|XP_004245441.1|//PREDICTED: 50S ribosomal protein L11, chloroplastic [Solanum lycopersicum]
Solyc11g007270.2.1	2476	1737.84282226293	529.936172025025	-1.71340709435149	0.000153935409253752	Down	2.82647169369308e-05	NA	GO:0033926//glycopeptide alpha-N-acetylgalactosaminidase activity	NA	K02986//small subunit ribosomal protein S4;K11593//eukaryotic translation initiation factor 2C	gi|703070308|ref|XP_010088753.1|//hypothetical protein L484_018310 [Morus notabilis];gi|460409118|ref|XP_004249987.1|//PREDICTED: alkaline/neutral invertase CINV1-like [Solanum lycopersicum]
Solyc10g079670.2.1	2554	28.9792704067093	4.63858751330189	-2.64326380825186	0.000543626358090736	Down	0.000112988689902861	NA	NA	NA	K00784//ribonuclease Z [EC:3.1.26.11]	gi|723738318|ref|XP_010312105.1|//PREDICTED: zinc phosphodiesterase ELAC protein 2 [Solanum lycopersicum]
Solyc02g079190.3.1	3152	2305.5216883338	1058.87709869772	-1.1225580885029	0.00561788677345744	Down	0.00152477508777064	NA	GO:0043178//alcohol binding	GO:0009755//hormone-mediated signaling pathway	K14485//transport inhibitor response 1	gi|460373991|ref|XP_004232795.1|//PREDICTED: protein AUXIN SIGNALING F-BOX 2-like [Solanum lycopersicum]
Solyc01g095080.3.1	2121	9.84215462633859	240.148116577133	4.60880650141273	7.83992769050292e-14	Up	2.99242804349001e-15	NA	GO:0016846//carbon-sulfur lyase activity;GO:0048037//cofactor binding;GO:0016740//transferase activity	GO:0008652//cellular amino acid biosynthetic process;GO:0003006//developmental process involved in reproduction;GO:0009692//ethylene metabolic process	K20772;K01762//1-aminocyclopropane-1-carboxylate synthase [EC:4.4.1.14]	gi|924183610|ref|NP_001234178.2|//1-aminocyclopropane-1-carboxylate synthase 2 [Solanum lycopersicum]
Solyc09g082680.3.1	3429	4635.39431035891	1266.59817097889	-1.87173316588518	0.020492651162408	Down	0.00662031488089272	NA	NA	NA	NA	gi|460404259|ref|XP_004247601.1|//PREDICTED: dymeclin [Solanum lycopersicum]
Solyc12g088330.1.1	654	3.9176151903862	29.6960932036964	2.92222554333402	0.000927258475144391	Up	0.000204820848505504	NA	NA	NA	NA	gi|970067002|ref|XP_015060571.1|//PREDICTED: uncharacterized protein LOC107006564 [Solanum pennellii]
Solyc04g054270.3.1	2613	463.409170666914	52.083453622096	-3.15338957377792	2.20787866941957e-08	Down	1.91177208478517e-09	NA	NA	GO:0009793//embryo development ending in seed dormancy	K17964//leucine-rich PPR motif-containing protein, mitochondrial;K17710//pentatricopeptide repeat domain-containing protein 1	gi|460383816|ref|XP_004237613.1|//PREDICTED: pentatricopeptide repeat-containing protein At4g39620, chloroplastic [Solanum lycopersicum]
Solyc09g005560.3.1	1878	85.6793299020597	1255.09714018512	3.87270802107089	1.76766040032927e-05	Up	2.64411107295413e-06	NA	NA	NA	NA	gi|460402506|ref|XP_004246753.1|//PREDICTED: trihelix transcription factor GT-3b [Solanum lycopersicum]
Solyc10g007750.1.1	834	29.9579154073876	0.411360472603356	-6.18639025575577	2.91424096046257e-06	Down	3.74219476248455e-07	NA	NA	NA	NA	gi|723734345|ref|XP_010327101.1|//PREDICTED: uncharacterized protein LOC104649471 [Solanum lycopersicum]
Solyc07g055540.3.1	2115	269.847097735523	772.737839505331	1.51783687482726	4.80460263157344e-05	Up	7.81954784375211e-06	NA	NA	NA	K07428//cytochrome P450, family 4, subfamily X [EC:1.14.14.1];K07426//cytochrome P450, family 4, subfamily B, polypeptide 1 [EC:1.14.14.1]	gi|460395368|ref|XP_004243255.1|//PREDICTED: cytochrome P450 CYP72A219 isoform X1 [Solanum lycopersicum]
Solyc06g076970.3.1	2713	3497.03644786285	7207.23083093786	1.04331221966879	0.00346016627175715	Up	0.000882969222321807	NA	GO:0016859//cis-trans isomerase activity	GO:0044267//cellular protein metabolic process	K01802//peptidylprolyl isomerase [EC:5.2.1.8]	gi|723706960|ref|XP_004241161.2|//PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-4 [Solanum lycopersicum]
Solyc01g079260.3.1	1426	785.967362612826	2603.76363597935	1.7280571789589	1.82587258867293e-08	Up	1.56058067907672e-09	NA	GO:0003677//DNA binding;GO:0043565//sequence-specific DNA binding;GO:0003700//transcription factor activity, sequence-specific DNA binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0010467//gene expression;GO:0006355//regulation of transcription, DNA-templated	K18835//WRKY transcription factor 2;K13424//WRKY transcription factor 33	gi|460367028|ref|XP_004229377.1|//PREDICTED: probable WRKY transcription factor 23 [Solanum lycopersicum]
Solyc02g072220.1.1	660	11.352691454779	32.5957768539312	1.52165069239048	0.0255724505017259	Up	0.00857784710246874	NA	NA	NA	NA	gi|723678284|ref|XP_010317343.1|//PREDICTED: uncharacterized protein LOC104646046 [Solanum lycopersicum]
Solyc04g076970.3.1	1226	21.4454445831979	119.555467252576	2.47893697602237	1.75341139332195e-05	Up	2.62083632295401e-06	NA	NA	NA	K14431//transcription factor TGA	gi|460385715|ref|XP_004238547.1|//PREDICTED: transcription factor HBP-1b(c38) [Solanum lycopersicum]
Solyc07g005310.2.1	7831	540.064995341301	215.502767023573	-1.32542664869308	0.00084532595862068	Down	0.000184737814797713	NA	NA	NA	NA	NA
Solyc08g005790.3.1	1776	2.38211305996143	18.3069468223506	2.94207740964865	0.00198484771530893	Up	0.000473868704955781	NA	NA	NA	K19882//O-palmitoleoyl-L-serine hydrolase [EC:3.1.1.98]	gi|723719442|ref|XP_004244682.2|//PREDICTED: uncharacterized protein LOC101248898 [Solanum lycopersicum]
Solyc01g096230.3.1	1359	321.06770902658	902.829348901642	1.49157574282866	0.00105909558179455	Up	0.000236666095603785	NA	GO:0000166//nucleotide binding	NA	K08900//mitochondrial chaperone BCS1	gi|460368306|ref|XP_004230008.1|//PREDICTED: probable mitochondrial chaperone BCS1-A [Solanum lycopersicum]
Solyc02g081000.1.1	618	21.8254236144075	0.504241095688274	-5.43575214273848	0.000174402443785425	Down	3.23932972037711e-05	NA	GO:0000166//nucleotide binding;GO:0004812//aminoacyl-tRNA ligase activity	GO:0006418//tRNA aminoacylation for protein translation	K01869//leucyl-tRNA synthetase [EC:6.1.1.4]	gi|723673763|ref|XP_010316571.1|//PREDICTED: putative leucine--tRNA ligase, mitochondrial isoform X1 [Solanum lycopersicum]
Solyc05g007770.3.1	2015	1006.87783248689	2049.81712929347	1.02560656061914	0.0364287397787991	Up	0.0128901903503854	NA	GO:0003676//nucleic acid binding	NA	K12581//CCR4-NOT transcription complex subunit 7/8;K03094//S-phase kinase-associated protein 1;K13126//polyadenylate-binding protein;K05941//glutathione gamma-glutamylcysteinyltransferase [EC:2.3.2.15];K01054//acylglycerol lipase [EC:3.1.1.23]	gi|460386245|ref|XP_004238810.1|//PREDICTED: NAC transcription factor 29 [Solanum lycopersicum]
Solyc12g008580.2.1	2991	269.722747699016	53.5084094847743	-2.33363964858748	0.0216817210546817	Down	0.00707072377767298	NA	GO:0043167//ion binding;GO:0016798//hydrolase activity, acting on glycosyl bonds	GO:0044238//primary metabolic process	K19891//glucan endo-1,3-beta-glucosidase 1/2/3 [EC:3.2.1.39]	gi|460412516|ref|XP_004251644.1|//PREDICTED: glucan endo-1,3-beta-glucosidase 13 [Solanum lycopersicum]
Solyc01g007130.3.1	3666	424.807694618087	61.322231221457	-2.79232780236573	1.03410825798386e-05	Down	1.47360812221272e-06	NA	NA	NA	K00924;K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460365431|ref|XP_004228606.1|//PREDICTED: probable receptor protein kinase TMK1 [Solanum lycopersicum]
Solyc09g064490.2.1	2313	86.7494745843789	16.0604911042041	-2.43333901090179	0.0168270275881657	Down	0.00526424789576095	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13199//plasminogen activator inhibitor 1 RNA-binding protein	gi|723730264|ref|XP_004247312.2|//PREDICTED: subtilisin-like protease SDD1 [Solanum lycopersicum]
Solyc09g005650.1.1	1842	9.38806071945762	0.931335158235081	-3.33345482594241	0.0359792600182371	Down	0.012695766829201	NA	NA	NA	K14007//protein transport protein SEC24;K13963//serpin B;K03065//26S proteasome regulatory subunit T5;K01230//mannosyl-oligosaccharide alpha-1,2-mannosidase [EC:3.2.1.113];K05658//ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:3.6.3.44]	gi|723728704|ref|XP_010326059.1|//PREDICTED: uncharacterized protein LOC101250835 [Solanum lycopersicum]
Solyc10g079380.2.1	2048	1.45841689105965	19.183935335036	3.7174236201832	0.000712503670801427	Up	0.000152630035637983	NA	NA	NA	K09419//heat shock transcription factor, other eukaryote	gi|460408616|ref|XP_004249739.1|//PREDICTED: heat stress transcription factor B-3-like [Solanum lycopersicum]
Solyc12g014010.2.1	1529	356.010237204569	1805.90548110267	2.34273175376596	0.00702613012881196	Up	0.00196447748979493	NA	GO:0016757//transferase activity, transferring glycosyl groups	NA	K12938//anthocyanidin 5,3-O-glucosyltransferase [EC:2.4.1.-];K08237//hydroquinone glucosyltransferase [EC:2.4.1.218]	gi|460412975|ref|XP_004251871.1|//PREDICTED: UDP-glucose flavonoid 3-O-glucosyltransferase 6-like [Solanum lycopersicum]
Solyc06g054260.1.1	627	31689.9110640136	6203.73266913496	-2.35281518658134	4.87363571040214e-07	Down	5.36448719726313e-08	GO:0009534//chloroplast thylakoid;GO:0009522//photosystem I	NA	GO:0044237//cellular metabolic process	K02692//photosystem I subunit II	gi|822092552|ref|NP_001295880.1|//photosystem I reaction center subunit II, chloroplastic [Solanum lycopersicum]
Solyc12g088760.1.1	2250	666.920148440378	310.820815208994	-1.1014309131268	0.0328043689258056	Down	0.0114316402671596	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13199//plasminogen activator inhibitor 1 RNA-binding protein;K01183//chitinase [EC:3.2.1.14]	gi|460414825|ref|XP_004252763.1|//PREDICTED: subtilisin-like protease [Solanum lycopersicum]
Solyc10g086170.1.1	1281	619.186122428765	89.9715426220548	-2.7828324730766	1.86412479671013e-07	Down	1.90456465923008e-08	NA	NA	NA	K02433//aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]	gi|723739869|ref|XP_010312345.1|//PREDICTED: amidase 1 [Solanum lycopersicum]
Solyc12g010890.2.1	4169	257.172165522034	1344.16203572171	2.38590065303133	2.46897673094315e-22	Up	3.60756999601056e-24	NA	NA	NA	K10635//E3 ubiquitin-protein ligase Arkadia [EC:2.3.2.27];K09903//uridylate kinase [EC:2.7.4.22]	gi|460412837|ref|XP_004251804.1|//PREDICTED: trihelix transcription factor ASIL1 isoform X2 [Solanum lycopersicum]
Solyc08g065380.3.1	1835	2.18644009990905	23.989832857826	3.4557673763584	0.00132091781598541	Up	0.000301475316358977	NA	GO:0005488//binding	NA	K01179//endoglucanase [EC:3.2.1.4];K08869//aarF domain-containing kinase;K17613//calcineurin-binding protein cabin-1	gi|460399157|ref|XP_004245108.1|//PREDICTED: transcription factor MYB1R1-like [Solanum lycopersicum]
Solyc12g049290.2.1	1139	87.6196892389366	742.529497419225	3.08312133598643	7.13104506073732e-25	Up	8.00076249918717e-27	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|350534410|ref|NP_001234651.1|//ELF4-like protein [Solanum lycopersicum]
Solyc11g005070.2.1	2522	34.4045667218225	197.32206334518	2.51988029820419	2.08896476407778e-11	Up	1.1298225259717e-12	GO:0031224//intrinsic component of membrane	NA	NA	K14209//solute carrier family 36 (proton-coupled amino acid transporter)	gi|350536217|ref|NP_001233979.1|//amino acid transporter [Solanum lycopersicum]
Solyc10g005870.3.1	1208	568.797639818095	201.487313139205	-1.49722647781706	1.46564739828646e-05	Down	2.15848101633734e-06	NA	NA	NA	K01802//peptidylprolyl isomerase [EC:5.2.1.8];K14826//FK506-binding nuclear protein [EC:5.2.1.8]	gi|460405767|ref|XP_004248346.1|//PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP16-1, chloroplastic isoform X1 [Solanum lycopersicum];gi|723734895|ref|XP_010327205.1|//PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP16-1, chloroplastic isoform X2 [Solanum lycopersicum]
Solyc08g081940.3.1	3719	1332.69655126915	151.992153980589	-3.13227956591536	5.20562382923224e-05	Down	8.55226860799663e-06	GO:0016020//membrane	GO:0000166//nucleotide binding	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460400041|ref|XP_004245544.1|//PREDICTED: probable inactive receptor kinase At4g23740 [Solanum lycopersicum]
Solyc01g089870.3.1	1692	1477.56309882187	308.17620914671	-2.26139234466616	6.90957284441262e-05	Down	1.16567491776545e-05	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial	gi|460367743|ref|XP_004229730.1|//PREDICTED: pentatricopeptide repeat-containing protein At1g02150 [Solanum lycopersicum]
Solyc09g097820.3.1	3017	371.940793159205	117.165600299653	-1.6665239282093	4.62790424411845e-07	Down	5.06295622353051e-08	NA	GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0042623//ATPase activity, coupled;GO:0008026//ATP-dependent helicase activity;GO:0003676//nucleic acid binding	NA	K13117//ATP-dependent RNA helicase DDX35 [EC:3.6.4.13]	gi|460405127|ref|XP_004248028.1|//PREDICTED: probable ATP-dependent RNA helicase DHX35 isoform X2 [Solanum lycopersicum];gi|723733518|ref|XP_010326958.1|//PREDICTED: probable ATP-dependent RNA helicase DHX35 isoform X1 [Solanum lycopersicum]
Solyc05g006640.3.1	3844	554.029966698853	3182.27024699545	2.52202044160014	1.49629729280082e-08	Up	1.26494791265553e-09	NA	NA	NA	K14802//phospholipid-transporting ATPase [EC:3.6.3.1]	gi|460386106|ref|XP_004238741.1|//PREDICTED: phospholipid-transporting ATPase 3-like [Solanum lycopersicum]
Solyc08g079810.3.1	4115	438.303987335123	154.173468195131	-1.50737729103868	0.00117316573912933	Down	0.000264911213942354	NA	NA	NA	NA	gi|460400322|ref|XP_004245684.1|//PREDICTED: uncharacterized protein LOC101256314 [Solanum lycopersicum]
Solyc11g066900.2.1	2834	1026.27414328432	189.514743412763	-2.43703416886521	0.00039470395467724	Down	7.92556360461566e-05	NA	NA	NA	K14611//solute carrier family 23 (nucleobase transporter), member 1/2	gi|460411233|ref|XP_004251018.1|//PREDICTED: nucleobase-ascorbate transporter 12 [Solanum lycopersicum]
Solyc05g053240.3.1	4088	2147.22400215741	1014.22827363367	-1.08209030543741	0.00274273783157436	Down	0.000681186155202772	NA	NA	NA	K20641;K13415//protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1]	gi|460388468|ref|XP_004239889.1|//PREDICTED: squamosa promoter-binding-like protein 1 [Solanum lycopersicum]
Solyc03g097460.3.1	3603	841.304392516694	413.629779242706	-1.02428782061879	0.000124390182041821	Down	2.22416767278446e-05	GO:0032039//integrator complex	NA	GO:0016180//snRNA processing	K13146//integrator complex subunit 9	gi|723683807|ref|XP_010318306.1|//PREDICTED: integrator complex subunit 9 homolog isoform X1 [Solanum lycopersicum];gi|723683829|ref|XP_010318313.1|//PREDICTED: integrator complex subunit 9 homolog isoform X2 [Solanum lycopersicum]
Solyc11g007200.2.1	804	4291.68505071338	1481.039774369	-1.53493382072471	0.00367603021476688	Down	0.000948330293588846	GO:0009536//plastid	GO:0005507//copper ion binding	GO:0032502//developmental process;GO:0006979//response to oxidative stress;GO:0034755//iron ion transmembrane transport;GO:0006970//response to osmotic stress;GO:0030003//cellular cation homeostasis	K07213//copper chaperone	gi|460409110|ref|XP_004249983.1|//PREDICTED: copper transport protein CCH-like [Solanum lycopersicum]
Solyc02g079310.2.1	2422	39.3145915244083	273.620751161294	2.79904087703084	3.06438458435144e-08	Up	2.7139472835914e-09	GO:0044464//cell part	GO:0015932//nucleobase-containing compound transmembrane transporter activity	GO:0015931//nucleobase-containing compound transport	K15014//solute carrier family 29 (equilibrative nucleoside transporter), member 1/2/3	gi|460373971|ref|XP_004232785.1|//PREDICTED: equilibrative nucleotide transporter 3-like [Solanum lycopersicum];gi|698487949|ref|XP_009790593.1|//PREDICTED: equilibrative nucleotide transporter 3-like isoform X1 [Nicotiana sylvestris]
Solyc02g065530.3.1	2109	239.820685383946	66.5596990698864	-1.84923528579381	9.62943292109586e-06	Down	1.36573700107238e-06	NA	GO:0016740//transferase activity	NA	K13648//alpha-1,4-galacturonosyltransferase [EC:2.4.1.43];K20893	gi|723677168|ref|XP_010317141.1|//PREDICTED: probable galacturonosyltransferase-like 1 [Solanum lycopersicum]
Solyc03g063140.3.1	1389	117.001766479001	12.1203587295229	-3.27102600722505	0.00116613762612838	Down	0.000263150335044775	GO:0005654//nucleoplasm	NA	GO:0009954//proximal/distal pattern formation;GO:0009944//polarity specification of adaxial/abaxial axis;GO:0009799//specification of symmetry;GO:0048441//petal development	K13944	gi|723681571|ref|XP_004234884.2|//PREDICTED: LOB domain-containing protein 6-like [Solanum lycopersicum]
Solyc07g056210.3.1	550	59.2961785568865	626.820877399731	3.40204219622752	4.44013600296355e-09	Up	3.48716511042351e-10	NA	NA	NA	NA	gi|460395284|ref|XP_004243214.1|//PREDICTED: uncharacterized protein LOC101250708 [Solanum lycopersicum]
Solyc09g013070.3.1	764	267.403155462794	42.8632951833879	-2.64120182105666	0.000513319441353178	Down	0.000105981675326348	GO:0031224//intrinsic component of membrane;GO:0044424//intracellular part	GO:0033765//steroid dehydrogenase activity, acting on the CH-CH group of donors	GO:0006629//lipid metabolic process	K09591//steroid 5-alpha-reductase [EC:1.3.1.22]	gi|460401694|ref|XP_004246352.1|//PREDICTED: steroid 5-alpha-reductase DET2 [Solanum lycopersicum]
Solyc04g072020.3.1	1517	459.849177410547	6154.61642948829	3.74243628248164	4.50307428029054e-20	Up	8.37570473335686e-22	NA	GO:0016772//transferase activity, transferring phosphorus-containing groups	NA	K14156//choline/ethanolamine kinase [EC:2.7.1.32 2.7.1.82]	gi|460384271|ref|XP_004237836.1|//PREDICTED: probable choline kinase 1 [Solanum lycopersicum]
Solyc02g081080.3.1	2145	406.115320702683	1257.07602248647	1.63011054123374	8.51052733270008e-06	Up	1.19847816695024e-06	NA	NA	NA	K13506//glycerol-3-phosphate O-acyltransferase 3/4 [EC:2.3.1.15]	gi|460373761|ref|XP_004232682.1|//PREDICTED: uncharacterized protein At1g04910 [Solanum lycopersicum];gi|802779020|ref|XP_012091297.1|//PREDICTED: uncharacterized protein At1g04910-like isoform X2 [Jatropha curcas]
Solyc05g051860.3.1	728	76.1610072605804	17.0446459181614	-2.15973392945598	0.000230730060354692	Down	4.39133624635105e-05	NA	NA	NA	NA	gi|460388679|ref|XP_004239993.1|//PREDICTED: uncharacterized protein LOC101248202 [Solanum lycopersicum]
Solyc03g025250.3.1	873	4.8974212517103	0.41519718683132	-3.56015372094335	0.0387414129109289	Down	0.0138426282631543	NA	NA	NA	K03327//multidrug resistance protein, MATE family	gi|460377300|ref|XP_004234431.1|//PREDICTED: protein TRANSPARENT TESTA 12-like [Solanum lycopersicum]
Solyc12g062940.2.1	1807	1.89541764187438	31.6459736596706	4.0614342799995	6.87954089402921e-05	Up	1.1600955346872e-05	NA	NA	NA	K18789//xylogalacturonan beta-1,3-xylosyltransferase [EC:2.4.2.41]	gi|723749897|ref|XP_010314525.1|//PREDICTED: probable glycosyltransferase At5g03795 [Solanum lycopersicum]
Solyc05g009740.1.1	2650	151.126436177852	492.376932992908	1.70400712594667	0.000520435218300661	Up	0.000107625413416284	NA	NA	NA	K13453;K13457//disease resistance protein RPM1	gi|460386542|ref|XP_004238957.1|//PREDICTED: putative late blight resistance protein homolog R1A-10 [Solanum lycopersicum]
Solyc09g009260.3.1	2509	1092.84684849181	3016.50463694459	1.46478656410729	0.0054172741918573	Up	0.00146255095316917	NA	GO:0016832//aldehyde-lyase activity	GO:0006007//glucose catabolic process	K01623//fructose-bisphosphate aldolase, class I [EC:4.1.2.13]	gi|460402100|ref|XP_004246552.1|//PREDICTED: fructose-bisphosphate aldolase cytoplasmic isozyme-like [Solanum lycopersicum]
Solyc07g026620.3.1	2640	1135.09966695668	359.22973097049	-1.6598403162547	1.17070703699201e-08	Down	9.76214995230766e-10	GO:0016020//membrane	NA	GO:0006810//transport	K02575//MFS transporter, NNP family, nitrate/nitrite transporter	gi|566185749|ref|XP_002313529.2|//hypothetical protein POPTR_0009s01410g [Populus trichocarpa];gi|970045319|ref|XP_015084090.1|//PREDICTED: uncharacterized protein LOC107027434 [Solanum pennellii];gi|723720628|ref|XP_010324710.1|//PREDICTED: uncharacterized protein LOC104648643 [Solanum lycopersicum];gi|565358094|ref|XP_006345864.1|//PREDICTED: pleiotropic drug resistance protein 2-like [Solanum tuberosum]
Solyc02g083570.3.1	2020	4248.88324373405	1992.19503349827	-1.09272480754058	0.00310236932018412	Down	0.000782415044743022	NA	GO:0016879//ligase activity, forming carbon-nitrogen bonds;GO:0032559//adenyl ribonucleotide binding	GO:0006464//cellular protein modification process	K06689//ubiquitin-conjugating enzyme E2 D [EC:2.3.2.23]	gi|460373401|ref|XP_004232508.1|//PREDICTED: ubiquitin-conjugating enzyme E2 10 [Solanum lycopersicum]
Solyc07g007610.2.1	1230	75.9435396810433	24.2646225895251	-1.6460728229556	0.0100218767917789	Down	0.00293132798513081	NA	NA	NA	NA	gi|460394897|ref|XP_004243026.1|//PREDICTED: uncharacterized protein LOC101259167 [Solanum lycopersicum]
Solyc04g078280.3.1	1892	276.269987526994	4947.78862836821	4.16263311987473	1.75349201261401e-17	Up	4.29418612005147e-19	NA	GO:0005506//iron ion binding;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K00517	gi|970026101|ref|XP_015074355.1|//PREDICTED: isoflavone 2'-hydroxylase-like [Solanum pennellii]
Solyc05g008430.3.1	1844	1519.96737360994	3863.89673681112	1.34601618218254	3.20508277747378e-06	Up	4.14480649747034e-07	NA	NA	NA	K12200//programmed cell death 6-interacting protein	gi|460386360|ref|XP_004238866.1|//PREDICTED: ALG-2 interacting protein X [Solanum lycopersicum]
Solyc02g081360.3.1	2169	163.648842393815	762.626509506862	2.22037328397093	0.0055402903560952	Up	0.00150051251406694	NA	NA	NA	K00666//fatty-acyl-CoA synthase [EC:6.2.1.-];K01904//4-coumarate--CoA ligase [EC:6.2.1.12]	gi|460373727|ref|XP_004232666.1|//PREDICTED: butyrate--CoA ligase AAE11, peroxisomal-like [Solanum lycopersicum];gi|460373725|ref|XP_004232665.1|//PREDICTED: butyrate--CoA ligase AAE11, peroxisomal-like [Solanum lycopersicum]
Solyc05g055160.3.1	2171	10526.7374197346	26385.0639650378	1.32566311379025	7.30733835638711e-05	Up	1.23713772233153e-05	GO:0044424//intracellular part	GO:0043169//cation binding;GO:0046872//metal ion binding;GO:0005515//protein binding;GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0031072//heat shock protein binding;GO:0051082//unfolded protein binding	GO:0044267//cellular protein metabolic process;GO:0006457//protein folding;GO:0006950//response to stress;GO:0009408//response to heat	K09503//DnaJ homolog subfamily A member 2	gi|460388160|ref|XP_004239737.1|//PREDICTED: dnaJ protein homolog [Solanum lycopersicum]
Solyc07g045350.3.1	2079	345.215748107145	1600.35348773851	2.21282042006493	2.41106794010396e-11	Up	1.32704943657541e-12	NA	GO:0016746//transferase activity, transferring acyl groups;GO:0016747//transferase activity, transferring acyl groups other than amino-acyl groups	GO:0008152//metabolic process	K00626//acetyl-CoA C-acetyltransferase [EC:2.3.1.9]	gi|862574765|dbj|BAR94039.1|//acetoacetyl-coenzyme A thiolase [Nicotiana benthamiana];gi|460396029|ref|XP_004243582.1|//PREDICTED: acetyl-CoA acetyltransferase, cytosolic 1 [Solanum lycopersicum]
BGI_novel_G000285	5214	149.847304731464	60.2628447038176	-1.31415245268382	0.000797621216374357	Down	0.000172974513078351	NA	NA	NA	K18195//rhamnogalacturonan endolyase [EC:4.2.2.23]	gi|970040037|ref|XP_015081376.1|//PREDICTED: uncharacterized protein LOC107025002 [Solanum pennellii]
Solyc02g077630.3.1	3453	564.535430330752	226.271403833422	-1.3190098591916	0.0336079649746445	Down	0.0117542692469468	GO:0016020//membrane	GO:0000166//nucleotide binding;GO:0004672//protein kinase activity	GO:0008152//metabolic process	K00924	gi|460374247|ref|XP_004232923.1|//PREDICTED: receptor-like protein kinase HSL1 [Solanum lycopersicum]
Solyc12g096310.2.1	978	29.3535223263629	0.857012802995476	-5.09807306511209	4.10394015196729e-05	Down	6.60687249006513e-06	NA	NA	NA	NA	gi|460415443|ref|XP_004253068.1|//PREDICTED: uncharacterized protein LOC101258542 [Solanum lycopersicum]
Solyc03g071690.3.1	1041	940.05191227997	169.208430477867	-2.47393897892431	1.53189404016852e-08	Down	1.29675390085832e-09	NA	GO:0022892//substrate-specific transporter activity;GO:0020037//heme binding;GO:0046872//metal ion binding;GO:0005506//iron ion binding;GO:0019825//oxygen binding	GO:0015669//gas transport;GO:0006631//fatty acid metabolic process;GO:0009725//response to hormone;GO:0019432//triglyceride biosynthetic process	NA	gi|350538955|ref|NP_001234111.1|//non-symbiotic hemoglobin 2 [Solanum lycopersicum]
Solyc02g084390.3.1	3527	584.328455742948	140.758147716116	-2.05356111322765	0.00157533966899705	Down	0.000366588845741337	NA	NA	NA	K11498//centromeric protein E	gi|460373316|ref|XP_004232466.1|//PREDICTED: kinesin-like protein NACK2 [Solanum lycopersicum]
Solyc03g119970.3.1	2059	1386.51564070797	3630.89459088223	1.38886115670754	0.00606851519534051	Up	0.00166574272769075	GO:0031224//intrinsic component of membrane;GO:0009941//chloroplast envelope	GO:0032559//adenyl ribonucleotide binding	GO:0051234//establishment of localization	K03301//ATP:ADP antiporter, AAA family	gi|460379953|ref|XP_004235723.1|//PREDICTED: plastidic ATP/ADP-transporter-like [Solanum lycopersicum]
Solyc01g010660.3.1	1843	362.25425064716	3065.70251186438	3.08114318485372	2.09730653197288e-20	Up	3.68990861447442e-22	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460364995|ref|XP_004228391.1|//PREDICTED: protein kinase 2B, chloroplastic-like [Solanum lycopersicum]
Solyc06g076600.2.1	5102	110.016497080675	47.3760363938744	-1.21549046448755	0.00347481681483584	Down	0.000887873463012513	NA	GO:0032559//adenyl ribonucleotide binding;GO:0016301//kinase activity;GO:0004871//signal transducer activity	GO:0006464//cellular protein modification process	K14500//BR-signaling kinase [EC:2.7.11.1]	gi|723707045|ref|XP_004242068.2|//PREDICTED: probable serine/threonine-protein kinase At5g41260 [Solanum lycopersicum]
Solyc11g022600.2.1	1843	375.917157461612	141.945219421836	-1.40508050249559	0.000132812104687972	Down	2.39159126129309e-05	NA	NA	NA	K15032//mTERF domain-containing protein, mitochondrial	gi|723743028|ref|XP_010312883.1|//PREDICTED: uncharacterized protein LOC101258025 isoform X2 [Solanum lycopersicum];gi|460410028|ref|XP_004250433.1|//PREDICTED: uncharacterized protein LOC101258025 isoform X1 [Solanum lycopersicum]
Solyc08g008410.3.1	3293	817.681656592035	1926.405581948	1.23630029633675	0.016947553925323	Up	0.00530511248937165	NA	NA	NA	K14833//nucleolar complex protein 2	gi|460398179|ref|XP_004244640.1|//PREDICTED: protein NLP6-like isoform X1 [Solanum lycopersicum]
Solyc10g084430.2.1	1084	213.896936807486	1.14877287235005	-7.54067842554916	7.934117765432e-19	Down	1.66314219161561e-20	NA	NA	NA	K11982//E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27];K11274//chromosome transmission fidelity protein 4	gi|460408155|ref|XP_004249512.1|//PREDICTED: E3 ubiquitin-protein ligase SGR9, amyloplastic-like [Solanum lycopersicum]
Solyc01g111990.3.1	3501	4464.24442060519	739.549994548571	-2.59369643411604	9.59316304657493e-13	Down	4.26235662424233e-14	GO:0009536//plastid;GO:0009507//chloroplast	GO:0043169//cation binding;GO:0003723//RNA binding;GO:0032559//adenyl ribonucleotide binding;GO:0004812//aminoacyl-tRNA ligase activity;GO:0043167//ion binding	GO:0006418//tRNA aminoacylation for protein translation;GO:0043039//tRNA aminoacylation;GO:0006412//translation	K01872//alanyl-tRNA synthetase [EC:6.1.1.7]	gi|460370475|ref|XP_004231078.1|//PREDICTED: probable alanine--tRNA ligase, chloroplastic isoform X1 [Solanum lycopersicum];gi|971581362|ref|XP_006364538.2|//PREDICTED: alanine--tRNA ligase, chloroplastic/mitochondrial isoform X1 [Solanum tuberosum]
Solyc08g083500.2.1	1793	157.119806065111	2.04183508889935	-6.26585489376689	3.23322089131091e-09	Down	2.47238176697745e-10	NA	NA	NA	K20770;K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30];K05280//flavonoid 3'-monooxygenase [EC:1.14.13.21]	gi|460401254|ref|XP_004246141.1|//PREDICTED: flavonoid 3'-monooxygenase-like [Solanum lycopersicum]
Solyc03g114160.1.1	2049	89.3659920708383	446.808276050928	2.32185808034341	0.00499311690613203	Up	0.00133370641677882	NA	NA	NA	K08332//vacuolar protein 8	gi|460380752|ref|XP_004236118.1|//PREDICTED: U-box domain-containing protein 19-like [Solanum lycopersicum]
Solyc04g076740.3.1	4571	568.533412937715	218.103445298527	-1.3822325795054	0.000218165081886143	Down	4.13511794166929e-05	NA	NA	NA	NA	gi|460384652|ref|XP_004238024.1|//PREDICTED: protein TIC 20-I, chloroplastic isoform X1 [Solanum lycopersicum]
Solyc10g086580.2.1	1688	321146.583731254	7953.87915962603	-5.33542949533709	7.44516566780803e-46	Down	1.49857964090366e-48	GO:0009532//plastid stroma;GO:0009570//chloroplast stroma	GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding	NA	K03064//26S proteasome regulatory subunit T4	gi|723739979|ref|XP_010312360.1|//PREDICTED: LOW QUALITY PROTEIN: ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic-like [Solanum lycopersicum];gi|377648386|gb|AFB70996.1|//ribulose bisphosphate carboxylase/oxygenase activase 2 (chloroplast) [Nicotiana attenuata]
Solyc06g083690.3.1	4238	1598.81697863873	786.25274999075	-1.02393973558302	0.000298412600878988	Down	5.8329941814873e-05	NA	GO:0015036//disulfide oxidoreductase activity	GO:0019725//cellular homeostasis	K03676//glutaredoxin 3	gi|723711330|ref|XP_010323070.1|//PREDICTED: monothiol glutaredoxin-S10 [Solanum lycopersicum]
Solyc08g081840.3.1	3522	314.378926895688	91.8020371339899	-1.77590644243661	1.41200052473688e-07	Down	1.41066621266181e-08	NA	NA	NA	NA	gi|565353991|ref|XP_006343902.1|//PREDICTED: BTB/POZ domain-containing protein POB1-like isoform X1 [Solanum tuberosum];gi|971544325|ref|XP_015162622.1|//PREDICTED: BTB/POZ domain-containing protein POB1-like isoform X2 [Solanum tuberosum]
Solyc07g065840.2.1	2444	23202.5185595188	55360.9792127996	1.25458804746606	0.00104661619296674	Up	0.000233526335585915	GO:0044424//intracellular part	GO:0005515//protein binding;GO:0032559//adenyl ribonucleotide binding	GO:0044267//cellular protein metabolic process;GO:0050896//response to stimulus	K04079//molecular chaperone HtpG	gi|970040986|ref|XP_015081882.1|//PREDICTED: heat shock cognate protein 80 isoform X1 [Solanum pennellii]
Solyc09g015040.1.1	1533	972.979843133892	3159.41561059411	1.69917590864774	0.000493145889447758	Up	0.000101448940057484	NA	NA	NA	NA	gi|460401595|ref|XP_004246304.1|//PREDICTED: uncharacterized protein LOC101267731 [Solanum lycopersicum]
Solyc03g114625.1.1	1042	3.97637947613709	0.345339258194791	-3.52536918925891	0.0397562111000401	Down	0.0142663253231798	NA	NA	NA	NA	gi|970017714|ref|XP_015070001.1|//PREDICTED: uncharacterized protein LOC107014557 [Solanum pennellii]
BGI_novel_G000463	937	953.2389550616	128.818406798874	-2.88749915573836	4.96372578902272e-05	Down	8.10944167783158e-06	NA	NA	NA	NA	gi|855316848|ref|XP_012899313.1|//uncharacterized protein [Blastocystis hominis]
Solyc01g108580.3.1	1336	678.594152035895	1707.3864931158	1.33116876907046	0.00510534574346858	Up	0.00136615763725812	NA	NA	NA	K13258//2-hydroxyisoflavanone dehydratase [EC:4.2.1.105];K20506//tuliposide A-converting enzyme [EC:4.2.99.22]	gi|460369941|ref|XP_004230815.1|//PREDICTED: 2-hydroxyisoflavanone dehydratase-like [Solanum lycopersicum]
Solyc08g006930.3.1	654	31970.5317612777	1819.97977913054	-4.13474841388308	1.66303656266165e-10	Down	1.04079260053262e-11	GO:0009521//photosystem;GO:0009534//chloroplast thylakoid	NA	GO:0044237//cellular metabolic process	K02698//photosystem I subunit X	gi|970047970|ref|XP_015085527.1|//PREDICTED: photosystem I reaction center subunit psaK, chloroplastic [Solanum pennellii]
Solyc03g096880.3.1	2661	356.36013273678	1032.02484255722	1.53406984762791	0.000378571152498485	Up	7.56634307327e-05	NA	NA	NA	K00759//adenine phosphoribosyltransferase [EC:2.4.2.7]	gi|460379073|ref|XP_004235289.1|//PREDICTED: uncharacterized protein At1g51745 [Solanum lycopersicum]
Solyc06g007165.1.1	2767	1923.28337178803	119.811860525127	-4.00472870454349	4.56820761695575e-35	Down	2.1965811189328e-37	GO:0005759//mitochondrial matrix;GO:0005743//mitochondrial inner membrane;GO:0005777//peroxisome	GO:0003824//catalytic activity;GO:0003959//NADPH dehydrogenase activity;GO:0050662//coenzyme binding	GO:0008152//metabolic process;GO:0055114//oxidation-reduction process	K17871//NADH:ubiquinone reductase (non-electrogenic) [EC:1.6.5.9]	gi|460389528|ref|XP_004240404.1|//PREDICTED: internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial [Solanum lycopersicum]
Solyc12g099080.2.1	1905	475.799254169392	1804.95485736451	1.92353783978292	2.10427699340365e-08	Up	1.81814301129777e-09	GO:0043231//intracellular membrane-bounded organelle;GO:0005622//intracellular	GO:0032561//guanyl ribonucleotide binding;GO:0005525//GTP binding	GO:0007264//small GTPase mediated signal transduction;GO:0035556//intracellular signal transduction	K07937//ADP-ribosylation factor 1	gi|297736783|emb|CBI25984.3|//unnamed protein product [Vitis vinifera];gi|47026845|gb|AAT08648.1|//ADP-ribosylation factor [Hyacinthus orientalis]
Solyc12g009200.2.1	987	5488.56513713712	490.839854124538	-3.48310473848346	3.72536923119179e-12	Down	1.80103022694787e-13	GO:0009536//plastid	NA	GO:0006091//generation of precursor metabolites and energy	K08908//light-harvesting complex I chlorophyll a/b binding protein 2	gi|460412625|ref|XP_004251698.1|//PREDICTED: chlorophyll a-b binding protein, chloroplastic [Solanum lycopersicum]
Solyc11g068430.2.1	864	475.981999094059	1666.63906727332	1.80796278429005	2.14109968472219e-13	Up	8.63526859575596e-15	NA	GO:0009055//electron carrier activity;GO:0043169//cation binding;GO:0051537//2 iron, 2 sulfur cluster binding;GO:0046872//metal ion binding;GO:0051536//iron-sulfur cluster binding	GO:0022900//electron transport chain;GO:0006091//generation of precursor metabolites and energy	K02639//ferredoxin	gi|460411309|ref|XP_004251055.1|//PREDICTED: ferredoxin, root R-B1 [Solanum lycopersicum]
Solyc09g064270.3.1	2909	693.586955265183	253.480423265503	-1.45220243544301	0.0053093214484399	Down	0.00143023952988949	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460403283|ref|XP_004247122.1|//PREDICTED: receptor-like serine/threonine-protein kinase ALE2 [Solanum lycopersicum]
Solyc11g011010.1.1	393	260.424484875143	117.629854731573	-1.14661082975115	0.00987125824174189	Down	0.0028821218804072	GO:0043231//intracellular membrane-bounded organelle;GO:0031224//intrinsic component of membrane	NA	GO:0015031//protein transport	NA	gi|460409489|ref|XP_004250171.1|//PREDICTED: uncharacterized protein LOC101253957 [Solanum lycopersicum]
Solyc05g041910.3.1	1668	2501.98695808691	15653.4318375446	2.64533281196237	1.87786667779674e-06	Up	2.32248458212673e-07	GO:0031224//intrinsic component of membrane	NA	NA	K03189//urease accessory protein	gi|460389034|ref|XP_004240164.1|//PREDICTED: cytochrome b561 and DOMON domain-containing protein At5g47530 [Solanum lycopersicum]
Solyc06g065930.3.1	2474	0.358885816161827	5.80498250767957	4.01569490839394	0.0134037291777601	Up	0.00406924451429663	NA	GO:0008238//exopeptidase activity;GO:0005488//binding	NA	NA	gi|460392360|ref|XP_004241784.1|//PREDICTED: ER membrane protein complex subunit 7 homolog [Solanum lycopersicum]
Solyc12g035130.2.1	2848	10544.2116257416	37678.0644187878	1.83727362224348	3.99051340819466e-11	Up	2.26686388627131e-12	NA	GO:0032559//adenyl ribonucleotide binding;GO:0042623//ATPase activity, coupled;GO:0003676//nucleic acid binding	NA	K12823//ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]	gi|460413678|ref|XP_004252209.1|//PREDICTED: ATP-dependent RNA helicase-like protein DB10 [Solanum lycopersicum]
Solyc01g009245.1.1	540	450.56762389525	20.2703989053382	-4.47429726533794	7.5071743225181e-22	Down	1.15288348772829e-23	NA	NA	NA	NA	gi|460365148|ref|XP_004228466.1|//PREDICTED: uncharacterized protein LOC101249750 [Solanum lycopersicum]
Solyc04g050040.3.1	3281	1285.32055637362	301.528967988408	-2.09175969545966	6.69778933775627e-09	Down	5.38259796190641e-10	GO:0016020//membrane	GO:0005488//binding	GO:0006810//transport	K05857//phosphatidylinositol phospholipase C, delta [EC:3.1.4.11];K15111//solute carrier family 25 (mitochondrial S-adenosylmethionine transporter), member 26;K14684//solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41	gi|460383622|ref|XP_004237518.1|//PREDICTED: mitochondrial substrate carrier family protein C [Solanum lycopersicum]
Solyc01g087950.3.1	1842	0.41867271778931	4.88966236448989	3.54584003415993	0.0397797147591003	Up	0.0142835094779489	NA	NA	NA	K16297//serine carboxypeptidase-like clade II [EC:3.4.16.-]	gi|460367624|ref|XP_004229672.1|//PREDICTED: serine carboxypeptidase-like 40 [Solanum lycopersicum]
BGI_novel_G000083	2274	98.2750652584456	28.018798264039	-1.81043033724928	0.0266632685571613	Down	0.00899641818172895	NA	NA	NA	K01738//cysteine synthase A [EC:2.5.1.47];K13126//polyadenylate-binding protein;K02350//DNA polymerase zeta [EC:2.7.7.7];K15095//(+)-neomenthol dehydrogenase [EC:1.1.1.208]	gi|113205226|gb|ABI34306.1|//Polyprotein, putative [Solanum demissum]
Solyc07g007120.3.1	1835	3902.53018468793	7872.68360560145	1.01244570809932	0.00362858098814229	Up	0.000934736961721015	GO:0043231//intracellular membrane-bounded organelle	GO:0003677//DNA binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0006351//transcription, DNA-templated	K16670//homeobox protein Meis2;K15613//homeobox protein Meis1	gi|798954394|ref|NP_001233945.2|//homeobox protein knotted-1-like LET12 [Solanum lycopersicum]
Solyc09g082710.3.1	842	499.233427731424	1588.19678529756	1.66960323778703	3.40285679709802e-05	Up	5.41098370971379e-06	NA	NA	NA	K11251//histone H2A	gi|460404263|ref|XP_004247603.1|//PREDICTED: probable histone H2AXb [Solanum lycopersicum]
Solyc04g064940.3.1	3353	235.55307049621	30.9227410482795	-2.92931202486895	7.15667392485031e-06	Down	9.89151144824249e-07	GO:0016020//membrane	GO:0000166//nucleotide binding;GO:0004672//protein kinase activity;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K00924;K17422//large subunit ribosomal protein L41;K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|460384092|ref|XP_004237748.1|//PREDICTED: receptor-like protein kinase 2 [Solanum lycopersicum]
Solyc03g098480.1.1	978	17.0847050701334	0.454261946959299	-5.23303707537389	0.000340042055580691	Down	6.72910121171122e-05	NA	NA	NA	NA	gi|970016030|ref|XP_015069105.1|//PREDICTED: uncharacterized protein LOC107013744 [Solanum pennellii]
Solyc07g008940.3.1	2647	790.749599196905	2578.17437902889	1.70505702142743	4.16680610744161e-10	Up	2.78280412914722e-11	NA	NA	NA	K12471//epsin	gi|460394479|ref|XP_004242830.1|//PREDICTED: uncharacterized protein LOC101263427 [Solanum lycopersicum]
Solyc02g087220.3.1	2177	436.874778883253	1530.36168855183	1.80858093706351	4.92490245858836e-06	Up	6.58477155172076e-07	NA	NA	NA	K18756//protein bicaudal C	gi|460372919|ref|XP_004232270.1|//PREDICTED: protein bicaudal C homolog 1-like [Solanum lycopersicum]
Solyc03g007380.2.1	1198	20.7789197652658	435.481383601584	4.38941848651084	1.05252135024417e-12	Up	4.70394028232727e-14	NA	NA	NA	K13425//WRKY transcription factor 22;K13459//disease resistance protein RPS2;K16225//probable WRKY transcription factor 52	gi|460376982|ref|XP_004234275.1|//PREDICTED: probable WRKY transcription factor 41 [Solanum lycopersicum]
Solyc12g094650.2.1	4080	337.378971875065	2213.53002069635	2.71390697854247	0.000335540379798446	Up	6.63501459233172e-05	GO:0016021//integral component of membrane	NA	NA	K05298//glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) [EC:1.2.1.13]	gi|460415550|ref|XP_004253121.1|//PREDICTED: uncharacterized protein LOC101249163 [Solanum lycopersicum]
Solyc06g011570.3.1	4372	383.394840231053	125.961116044036	-1.60585247594424	5.26178917122505e-06	Down	7.0763885976517e-07	NA	NA	NA	K08770//ubiquitin C;K07042//probable rRNA maturation factor	gi|460389929|ref|XP_004240597.1|//PREDICTED: uncharacterized protein LOC101250602 isoform X2 [Solanum lycopersicum];gi|723704713|ref|XP_010321904.1|//PREDICTED: uncharacterized protein LOC101250307 isoform X4 [Solanum lycopersicum];gi|723704693|ref|XP_010321900.1|//PREDICTED: uncharacterized protein LOC101250602 isoform X3 [Solanum lycopersicum]
Solyc11g069190.2.1	4058	1174.04215196467	324.931120777039	-1.85327837513218	4.55939914626758e-05	Down	7.38429599319093e-06	GO:0043231//intracellular membrane-bounded organelle	GO:0005515//protein binding;GO:0003676//nucleic acid binding	GO:0006351//transcription, DNA-templated;GO:0009755//hormone-mediated signaling pathway	K14486//auxin response factor	gi|350537149|ref|NP_001233771.1|//auxin response factor 4 [Solanum lycopersicum]
Solyc11g073100.2.1	1932	17.2605843373663	69.5959639180811	2.01152233608419	0.00358307498758778	Up	0.000921144632078162	NA	NA	NA	K14861//nucleolar pre-ribosomal-associated protein 1	gi|723746615|ref|XP_010313551.1|//PREDICTED: putative nuclease HARBI1 [Solanum lycopersicum];gi|970061004|ref|XP_015057278.1|//PREDICTED: putative nuclease HARBI1 isoform X2 [Solanum pennellii]
Solyc04g071755.1.1	999	315.087615969874	1168.38639149705	1.89069250223877	0.00532581145294765	Up	0.00143527720310167	NA	NA	NA	K19600//tubby-related protein 1	gi|460384229|ref|XP_004237815.1|//PREDICTED: tubby-like F-box protein 5 [Solanum lycopersicum]
Solyc02g032850.3.1	2178	596.454875256969	4426.48507148907	2.89167665575767	1.05780132824484e-08	Up	8.76109829125742e-10	NA	NA	NA	K18875//enhanced disease susceptibility 1 protein	gi|460371576|ref|XP_004231611.1|//PREDICTED: lipase-like PAD4 [Solanum lycopersicum]
Solyc02g085833.1.1	9041	1776.1468873583	3873.7416519872	1.12497684325957	2.67278024713698e-05	Up	4.15243330478117e-06	GO:0043231//intracellular membrane-bounded organelle;GO:0005634//nucleus	GO:0003677//DNA binding;GO:0003684//damaged DNA binding	GO:0006281//DNA repair;GO:0006511//ubiquitin-dependent protein catabolic process;GO:0043161//proteasome-mediated ubiquitin-dependent protein catabolic process;GO:0006289//nucleotide-excision repair	K10839//UV excision repair protein RAD23	gi|982742409|ref|NP_001306078.1|//ubiquitin receptor RAD23d [Solanum lycopersicum];gi|460373117|ref|XP_004232369.1|//PREDICTED: NADPH-dependent diflavin oxidoreductase 1 isoform X1 [Solanum lycopersicum]
Solyc08g079280.3.1	2056	2013.43009039529	445.820920681808	-2.17511915691311	2.01928965783501e-05	Down	3.06265454664181e-06	NA	NA	NA	K20770;K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30];K05280//flavonoid 3'-monooxygenase [EC:1.14.13.21]	gi|460400397|ref|XP_004245721.1|//PREDICTED: flavonoid 3'-monooxygenase-like [Solanum lycopersicum]
Solyc07g018360.3.1	3869	19576.1500745187	4496.01579319371	-2.12237805810127	5.80674368252939e-13	Down	2.49775689937339e-14	NA	NA	NA	K02357//elongation factor Ts	gi|460394682|ref|XP_004242929.1|//PREDICTED: uncharacterized protein LOC101245558 [Solanum lycopersicum]
Solyc02g078740.3.1	3879	18.535825086171	5.03357652698342	-1.88066058205551	0.0381628549651995	Down	0.0135915825249518	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723674497|ref|XP_010316718.1|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 isoform X1 [Solanum lycopersicum]
Solyc05g056400.3.1	10960	3.86137495331535	30.3424864936666	2.97415275877047	0.000698396103655706	Up	0.000149269541462719	NA	NA	NA	K09580//protein disulfide-isomerase A1 [EC:5.3.4.1];K00901//diacylglycerol kinase (ATP) [EC:2.7.1.107]	gi|723700932|ref|XP_010321305.1|//PREDICTED: protein disulfide-isomerase-like isoform X2 [Solanum lycopersicum]
Solyc02g068120.3.1	1482	239.037213259761	696.135941516561	1.54213382912856	1.48157007401152e-05	Up	2.1835873239308e-06	NA	NA	NA	K10450//kelch-like protein 12;K10457//kelch-like protein 20;K10443//kelch-like protein 2/3	gi|460374996|ref|XP_004233294.1|//PREDICTED: B2 protein-like [Solanum lycopersicum]
Solyc07g019430.1.1	201	40.6275909652114	5.43349940292124	-2.90250626275911	0.000583268874046163	Down	0.000122336885129632	NA	NA	NA	NA	NA
Solyc04g074420.1.1	270	91.1770823837644	458.0317620769	2.32870449544137	0.00260448301286634	Up	0.000642092241206872	NA	NA	NA	K14299//nucleoporin SEH1	gi|565395285|ref|XP_006363272.1|//PREDICTED: protein EXORDIUM-like [Solanum tuberosum]
Solyc06g010033.1.1	1687	260.940905734169	705.317667256435	1.43455005544522	0.0211292655842747	Up	0.00686339362062147	NA	NA	NA	K08472//mlo protein	gi|460389894|ref|XP_004240581.1|//PREDICTED: MLO-like protein 6 [Solanum lycopersicum]
Solyc05g007640.3.1	4059	29.7461427471141	232.816782362406	2.96842054923455	2.97503444166908e-05	Up	4.66082814907378e-06	NA	NA	NA	K13453;K13457//disease resistance protein RPM1	gi|723697462|ref|XP_004239390.2|//PREDICTED: putative late blight resistance protein homolog R1C-3 [Solanum lycopersicum]
Solyc09g089940.1.1	1914	900.482972475621	4433.22222725168	2.29958478219184	1.25601910295377e-13	Up	4.90178917844265e-15	NA	NA	NA	K00640//serine O-acetyltransferase [EC:2.3.1.30]	gi|460404501|ref|XP_004247720.1|//PREDICTED: uncharacterized protein LOC101249209 [Solanum lycopersicum]
Solyc06g053715.1.1	515	11.5564886954543	89.1553167897289	2.94761771740892	0.00220457371648035	Up	0.000532078977717694	NA	NA	NA	NA	NA
Solyc01g067330.3.1	967	31.8400185251423	164.20220628964	2.36656043151848	0.00170937760266292	Up	0.000401157051825174	GO:0016020//membrane	NA	NA	NA	gi|460366699|ref|XP_004229217.1|//PREDICTED: CASP-like protein 1E2 [Solanum lycopersicum]
BGI_novel_G000142	1264	0.432927070723401	19.5886994187118	5.49975378918524	0.000102774738810604	Up	1.7978300627634e-05	NA	NA	NA	K15086//(3S)-linalool synthase [EC:4.2.3.25];K11816//indole-3-pyruvate monooxygenase [EC:1.14.13.168]	gi|723751373|ref|XP_010314347.1|//PREDICTED: uncharacterized protein LOC104645038 [Solanum lycopersicum]
Solyc02g086850.2.1	2888	2.91860094456161	278.395315571692	6.57571415857009	2.19347610922114e-15	Up	6.75343397277717e-17	GO:0044464//cell part	GO:0046914//transition metal ion binding;GO:0004518//nuclease activity	NA	K18327//RNA exonuclease 4 [EC:3.1.-.-]	gi|460375820|ref|XP_004233702.1|//PREDICTED: RNA exonuclease 4 [Solanum lycopersicum]
Solyc04g051410.3.1	1995	65.3397366227416	30.1219068282508	-1.11714753860401	0.0252022072089368	Down	0.00843006541787518	NA	GO:0016787//hydrolase activity	NA	K11851//ubiquitin carboxyl-terminal hydrolase 30 [EC:3.4.19.12]	gi|460383544|ref|XP_004237481.1|//PREDICTED: ubiquitin carboxyl-terminal hydrolase 27 [Solanum lycopersicum]
Solyc05g007060.3.1	1735	432.352380080719	1784.1854078525	2.04498600771314	5.80885697537294e-08	Up	5.43470665282022e-09	NA	NA	NA	K05579//NAD(P)H-quinone oxidoreductase subunit H [EC:1.6.5.3]	gi|460386163|ref|XP_004238769.1|//PREDICTED: uncharacterized protein LOC101257368 [Solanum lycopersicum]
Solyc02g069410.3.1	1534	1319.14541033456	551.202183179648	-1.25895009531786	7.35046515073549e-07	Down	8.34283822274846e-08	NA	NA	NA	NA	gi|460374808|ref|XP_004233201.1|//PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein At3g48420 isoform X2 [Solanum lycopersicum]
Solyc12g005470.2.1	3020	806.203960201644	294.07609938981	-1.45495533391912	0.000114574237634102	Down	2.03285139085406e-05	GO:0016021//integral component of membrane	GO:0061630//ubiquitin protein ligase activity;GO:0046914//transition metal ion binding;GO:0008270//zinc ion binding	GO:0043161//proteasome-mediated ubiquitin-dependent protein catabolic process;GO:0042787//protein ubiquitination involved in ubiquitin-dependent protein catabolic process;GO:0000209//protein polyubiquitination	K16285//RING/U-box domain-containing protein [EC:2.3.2.27]	gi|460412212|ref|XP_004251496.1|//PREDICTED: transmembrane E3 ubiquitin-protein ligase 1-like isoform X1 [Solanum lycopersicum];gi|565404083|ref|XP_006367478.1|//PREDICTED: DSC E3 ubiquitin ligase complex subunit 1 isoform X2 [Solanum tuberosum]
Solyc03g112120.2.1	5474	333.01531798247	4.35949887675357	-6.25528242232248	1.47271837333595e-21	Down	2.3330300755471e-23	NA	NA	NA	K01514//exopolyphosphatase [EC:3.6.1.11];K10406//kinesin family member C2/C3	gi|723688455|ref|XP_010319108.1|//PREDICTED: uncharacterized protein LOC104646650 [Solanum lycopersicum]
Solyc02g067230.3.1	1886	116.658620333017	24.6094658885369	-2.24500766556384	5.40149832189916e-07	Down	5.98779484468767e-08	NA	NA	NA	K16222//Dof zinc finger protein DOF5.5	gi|460375142|ref|XP_004233366.1|//PREDICTED: cyclic dof factor 2 [Solanum lycopersicum]
Solyc07g045430.3.1	1019	80.7926629653069	3.21138422250089	-4.65295709312194	1.78959360243179e-10	Down	1.12733457138427e-11	NA	NA	NA	NA	gi|460396013|ref|XP_004243574.1|//PREDICTED: nudix hydrolase 2-like [Solanum lycopersicum]
Solyc09g075220.1.1	1601	348.435294051755	798.041151263551	1.19557237519779	0.00428524134494226	Up	0.0011256185983975	NA	NA	NA	NA	gi|460403870|ref|XP_004247409.1|//PREDICTED: uncharacterized protein LOC101244031 [Solanum lycopersicum]
Solyc01g109460.3.1	1886	4069.35434311098	19507.239798829	2.26113784134594	0.000505585979201968	Up	0.000104215389331552	GO:0031224//intrinsic component of membrane	GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;GO:0022857//transmembrane transporter activity	GO:0071702//organic substance transport;GO:0008152//metabolic process	K08150//MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13	gi|663071113|ref|NP_001287655.1|//polyol transporter 5-like [Solanum lycopersicum]
Solyc03g005470.3.1	839	1119.24551143103	9713.19854933301	3.11741991979045	3.56001498874585e-25	Up	3.86150425572179e-27	GO:0016021//integral component of membrane	NA	NA	K11673//actin-related protein 8	gi|460376502|ref|XP_004234037.1|//PREDICTED: uncharacterized protein LOC101261585 [Solanum lycopersicum]
Solyc03g006560.3.1	1978	301.348154223444	923.211001387034	1.61522918765162	0.000124832292703682	Up	2.23346878253196e-05	NA	GO:0003824//catalytic activity	NA	K01054//acylglycerol lipase [EC:3.1.1.23]	gi|460376688|ref|XP_004234129.1|//PREDICTED: caffeoylshikimate esterase [Solanum lycopersicum]
Solyc05g005960.3.1	2171	2147.07271383696	281.297044895057	-2.93220474912912	4.41469230914976e-06	Down	5.81703344000462e-07	NA	NA	NA	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460386024|ref|XP_004238700.1|//PREDICTED: protein NRT1/ PTR FAMILY 1.2-like [Solanum lycopersicum]
Solyc03g007590.3.1	2305	1413.14448860783	323.568749974332	-2.12676479804179	3.12510259174334e-08	Down	2.77137669534368e-09	NA	NA	NA	K11323//histone arginine demethylase JMJD6 [EC:1.14.11.-]	gi|971577944|ref|XP_015158592.1|//PREDICTED: uncharacterized protein At3g49140-like isoform X2 [Solanum tuberosum];gi|460376820|ref|XP_004234194.1|//PREDICTED: uncharacterized protein At3g49140-like [Solanum lycopersicum]
Solyc12g094540.1.1	615	69.4897137953028	180.916532780185	1.38045290842856	0.0193316345568408	Up	0.00617966669000548	NA	GO:0004527//exonuclease activity	NA	K20777	gi|460415562|ref|XP_004253127.1|//PREDICTED: Werner Syndrome-like exonuclease [Solanum lycopersicum]
Solyc09g009020.3.1	1861	4968.7416594191	1781.49953782194	-1.4797884243737	0.00217942799810286	Down	0.00052544134082784	GO:0016020//membrane;GO:0043234//protein complex;GO:0005576//extracellular region;GO:0009536//plastid;GO:0031967//organelle envelope	GO:0016836//hydro-lyase activity;GO:0046914//transition metal ion binding;GO:0003676//nucleic acid binding	GO:0006007//glucose catabolic process;GO:0009314//response to radiation;GO:0006970//response to osmotic stress;GO:0009725//response to hormone;GO:0010038//response to metal ion	K01689//enolase [EC:4.2.1.11]	gi|350538295|ref|NP_001234080.1|//enolase [Solanum lycopersicum]
Solyc06g009640.2.1	1195	479.057521514954	1430.51406423088	1.57826288260423	4.25370126382539e-08	Up	3.88458628909058e-09	GO:0043231//intracellular membrane-bounded organelle	GO:0003677//DNA binding;GO:0005515//protein binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0006351//transcription, DNA-templated	K09060//plant G-box-binding factor	gi|460389874|ref|XP_004240572.1|//PREDICTED: ocs element-binding factor 1-like [Solanum lycopersicum]
Solyc06g084250.3.1	3112	200.276040065523	87.9855057028591	-1.18665204930922	0.00288276979362575	Down	0.000719295549371209	NA	NA	NA	K10523//speckle-type POZ protein;K12585//exosome complex exonuclease DIS3/RRP44 [EC:3.1.13.-];K08332//vacuolar protein 8	gi|460393472|ref|XP_004242333.1|//PREDICTED: ARM REPEAT PROTEIN INTERACTING WITH ABF2-like [Solanum lycopersicum];gi|697098645|ref|XP_009627781.1|//PREDICTED: ARM REPEAT PROTEIN INTERACTING WITH ABF2-like [Nicotiana tomentosiformis]
Solyc09g075680.1.1	993	104.92362956404	298.923906220974	1.51043866019564	0.0268669555790317	Up	0.00907703681170458	NA	NA	NA	K13258//2-hydroxyisoflavanone dehydratase [EC:4.2.1.105]	gi|460403806|ref|XP_004247377.1|//PREDICTED: 2-hydroxyisoflavanone dehydratase-like [Solanum lycopersicum]
Solyc07g054930.3.1	1497	10.1432168395482	0.397989344280004	-4.67164164906119	0.00220433251671843	Down	0.000531894935541323	NA	NA	NA	K05278//flavonol synthase [EC:1.14.11.23];K06892//feruloyl-CoA ortho-hydroxylase [EC:1.14.11.-]	gi|723715034|ref|XP_004243295.2|//PREDICTED: flavonol synthase/flavanone 3-hydroxylase-like [Solanum lycopersicum]
Solyc12g057110.2.1	1519	1442.3077455869	3077.19777872204	1.09323814639875	0.000547867994878208	Up	0.00011401323301793	NA	GO:0005515//protein binding	NA	K06630//14-3-3 protein epsilon	gi|823683788|ref|NP_001296299.1|//14-3-3 protein 2 [Solanum lycopersicum]
Solyc07g063475.1.1	3342	714.632463369176	176.592033210892	-2.01678119365673	0.000491849831668073	Down	0.000101163984312823	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460397281|ref|XP_004244196.1|//PREDICTED: receptor-like protein kinase THESEUS 1 [Solanum lycopersicum]
Solyc03g059180.3.1	2464	9116.22416804842	3037.58240783666	-1.58551285220245	1.09323870626858e-06	Down	1.29543978202915e-07	NA	NA	NA	NA	gi|460378042|ref|XP_004234789.1|//PREDICTED: uncharacterized protein LOC101256951 [Solanum lycopersicum]
Solyc01g086680.3.1	789	38.4096266577913	903.709251870821	4.55631884657401	8.40576301121164e-15	Up	2.77915304567792e-16	NA	GO:0003824//catalytic activity;GO:0016740//transferase activity	NA	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|969997205|ref|XP_015066700.1|//PREDICTED: probable glutathione S-transferase [Solanum pennellii]
Solyc06g053200.3.1	1525	631.788017401078	2317.3367854538	1.87495525054797	1.53404462374232e-06	Up	1.86923806284987e-07	NA	NA	NA	K01057//6-phosphogluconolactonase [EC:3.1.1.31]	gi|460390718|ref|XP_004240972.1|//PREDICTED: probable 6-phosphogluconolactonase 4, chloroplastic [Solanum lycopersicum]
Solyc06g050270.1.1	1299	19.1471065796761	123.98468380019	2.69496361070203	3.37648310242216e-09	Up	2.59392050290302e-10	NA	GO:0000166//nucleotide binding;GO:0004672//protein kinase activity	GO:0009987//cellular process	K07198//5'-AMP-activated protein kinase, catalytic alpha subunit [EC:2.7.11.11]	gi|723705910|ref|XP_010322143.1|//PREDICTED: CBL-interacting protein kinase 18-like [Solanum lycopersicum]
Solyc06g051650.3.1	1945	661.345399945682	1358.18272159008	1.0382017359878	8.9331529118639e-05	Up	1.54302335595562e-05	GO:0016021//integral component of membrane	GO:0003755//peptidyl-prolyl cis-trans isomerase activity	GO:0006457//protein folding;GO:0000413//protein peptidyl-prolyl isomerization	K01802//peptidylprolyl isomerase [EC:5.2.1.8]	gi|994315545|ref|NP_001307125.1|//peptidyl-prolyl cis-trans isomerase B [Solanum lycopersicum];gi|697141934|ref|XP_009625080.1|//PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-4-like [Nicotiana tomentosiformis];gi|723706255|ref|XP_010322200.1|//PREDICTED: peptidyl-prolyl cis-trans isomerase CYP19-4 isoform X2 [Solanum lycopersicum]
Solyc05g052670.1.1	1386	287.65161124774	7004.12156714944	4.60580966769924	1.34199454802641e-07	Up	1.33759259781669e-08	NA	NA	NA	K19747//BAHD acyltransferase [EC:2.3.1.-]	gi|460388562|ref|XP_004239936.1|//PREDICTED: BAHD acyltransferase DCR-like [Solanum lycopersicum]
Solyc07g062670.1.1	267	0.49636507044691	33.7741779994289	6.08837525165038	8.06388672989161e-06	Up	1.12997907877347e-06	NA	NA	NA	NA	NA
Solyc08g075013.1.1	2733	273.052869540445	85.6002685095129	-1.67349309115291	0.000775896180283089	Down	0.000167916103426406	NA	NA	NA	K12603//CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]	gi|723726070|ref|XP_010325634.1|//PREDICTED: carbon catabolite repressor protein 4 homolog 4 isoform X2 [Solanum lycopersicum];gi|460401043|ref|XP_004246039.1|//PREDICTED: carbon catabolite repressor protein 4 homolog 4 isoform X1 [Solanum lycopersicum]
Solyc01g100120.3.1	6762	10.3354560260201	0.436113064257884	-4.56675602661386	0.00329917057333369	Down	0.000836721208474818	NA	NA	NA	K10406//kinesin family member C2/C3	gi|460368841|ref|XP_004230273.1|//PREDICTED: kinesin-4-like [Solanum lycopersicum]
Solyc07g043460.3.1	2155	13505.4206476763	385.222520355229	-5.13170271881641	5.38717063955995e-08	Down	5.00403654159214e-09	NA	GO:0005506//iron ion binding;GO:0016491//oxidoreductase activity	NA	K07428//cytochrome P450, family 4, subfamily X [EC:1.14.14.1];K07426//cytochrome P450, family 4, subfamily B, polypeptide 1 [EC:1.14.14.1]	gi|460396143|ref|XP_004243638.1|//PREDICTED: cytochrome P450 CYP72A219-like [Solanum lycopersicum]
Solyc07g044750.3.1	1631	61.8724116167188	25.4278187728732	-1.28288855601968	0.0208567110871435	Down	0.0067612500493845	NA	NA	NA	NA	gi|565372760|ref|XP_006352956.1|//PREDICTED: N-acetyl-D-glucosamine kinase-like [Solanum tuberosum]
Solyc04g008210.2.1	1192	1501.19660178648	109.972165703768	-3.77090260508032	4.88485853549765e-08	Down	4.48571000633685e-09	NA	NA	NA	K08235//xyloglucan:xyloglucosyl transferase [EC:2.4.1.207]	gi|831181979|ref|NP_001296719.1|//probable xyloglucan endotransglucosylase/hydrolase protein 27 precursor [Solanum lycopersicum]
Solyc06g084615.1.1	2222	1343.66130753107	269.18425208374	-2.31950361189895	1.0593831830587e-19	Down	2.04547669906219e-21	NA	NA	NA	K17911//beta-carotene isomerase [EC:5.2.1.14]	gi|460393422|ref|XP_004242308.1|//PREDICTED: beta-carotene isomerase D27, chloroplastic isoform X1 [Solanum lycopersicum];gi|970037207|ref|XP_015079954.1|//PREDICTED: uncharacterized protein LOC107023693 [Solanum pennellii]
Solyc04g054740.3.1	1637	20710.5138078741	773.391734066536	-4.74302019052686	3.02510212806929e-11	Down	1.68913187261361e-12	GO:0044424//intracellular part	GO:0016872//intramolecular lyase activity	GO:0006644//phospholipid metabolic process;GO:0006020//inositol metabolic process	K01858//myo-inositol-1-phosphate synthase [EC:5.5.1.4]	gi|460383410|ref|XP_004237418.1|//PREDICTED: inositol-3-phosphate synthase [Solanum lycopersicum]
Solyc07g007770.2.1	982	51.9720879876633	14.6381499141157	-1.82800379483129	0.0299870243030064	Down	0.0102956046240865	NA	NA	NA	NA	gi|971572300|ref|XP_015169921.1|//PREDICTED: uncharacterized protein LOC107063036 [Solanum tuberosum]
Solyc01g028870.3.1	1493	1738.6404622257	487.654736313661	-1.8340276509927	2.65544033946707e-09	Down	2.00830790546395e-10	NA	NA	NA	NA	gi|460366137|ref|XP_004228949.1|//PREDICTED: uncharacterized protein LOC101254024 isoform X1 [Solanum lycopersicum]
Solyc02g079240.1.1	240	0.367327469605682	5.44871178491156	3.89077648680838	0.0183650302239707	Up	0.00582686511355446	NA	NA	NA	NA	gi|723674281|ref|XP_010316669.1|//PREDICTED: uncharacterized protein LOC104645811 [Solanum lycopersicum]
Solyc09g011750.3.1	3335	67.8767224326425	16.4793130544111	-2.04226079850377	0.01217253243507	Down	0.00364295746686958	NA	GO:0032559//adenyl ribonucleotide binding;GO:0016301//kinase activity	GO:0006464//cellular protein modification process	K14500//BR-signaling kinase [EC:2.7.11.1]	gi|970048945|ref|XP_015085979.1|//PREDICTED: probable serine/threonine-protein kinase At5g41260 [Solanum pennellii]
Solyc09g010380.3.1	1402	4820.32135574921	1806.11546105543	-1.41623920548693	0.0284607043562095	Down	0.00968881813348967	GO:0044424//intracellular part;GO:0005829//cytosol	GO:0000287//magnesium ion binding;GO:0046872//metal ion binding;GO:0016462//pyrophosphatase activity;GO:0004427//inorganic diphosphatase activity	GO:0006793//phosphorus metabolic process;GO:0006796//phosphate-containing compound metabolic process	K01507//inorganic pyrophosphatase [EC:3.6.1.1]	gi|460401930|ref|XP_004246468.1|//PREDICTED: soluble inorganic pyrophosphatase [Solanum lycopersicum]
Solyc04g078370.3.1	1779	2.18173168078122	70.136565493875	5.00662119669063	1.49585032147724e-09	Up	1.08837774993424e-10	NA	NA	NA	K00517;K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30];K07408//cytochrome P450, family 1, subfamily A, polypeptide 1 [EC:1.14.14.1]	gi|460384849|ref|XP_004238119.1|//PREDICTED: cytochrome P450 81E8 [Solanum lycopersicum]
Solyc04g057890.3.1	4289	418.485411641035	1866.67406329474	2.15722080652487	1.05316495241261e-08	Up	8.70309638996107e-10	NA	GO:0003824//catalytic activity	NA	K00799//glutathione S-transferase [EC:2.5.1.18];K11423//histone-lysine N-methyltransferase SETD2 [EC:2.1.1.43]	gi|723691854|ref|XP_010319721.1|//PREDICTED: histone-lysine N-methyltransferase ASHH2-like [Solanum lycopersicum]
Solyc08g075230.1.1	597	31.2336808358995	89.0490209548801	1.51149715125168	0.0032163325160261	Up	0.000813554214020915	NA	NA	NA	NA	gi|460401009|ref|XP_004246022.1|//PREDICTED: uncharacterized protein LOC101255910 [Solanum lycopersicum]
Solyc04g012050.3.1	1422	12.6256291443844	10481.5285589459	9.69727813006784	1.3103672677899e-52	Up	1.3187683103596e-55	NA	NA	NA	K09286//EREBP-like factor	gi|460382840|ref|XP_004237144.1|//PREDICTED: ethylene-responsive transcription factor ABR1-like [Solanum lycopersicum]
Solyc04g074730.1.1	396	1597.67070347284	4971.05668055396	1.63758246867509	0.00938225968694164	Up	0.00272291165657252	NA	NA	NA	NA	NA
Solyc06g051840.1.1	1053	38.8226673688884	177.206193601058	2.19045787988703	1.09184368963149e-06	Up	1.29337976951278e-07	NA	NA	NA	K13434//pathogenesis-related genes transcriptional activator PTI6	gi|460391034|ref|XP_004241128.1|//PREDICTED: ethylene-responsive transcription factor CRF4-like [Solanum lycopersicum]
Solyc06g063400.3.1	883	0.410539856605204	8.8128985004522	4.4240223938079	0.00479192327061942	Up	0.0012742500601088	NA	NA	NA	NA	gi|460392666|ref|XP_004241936.1|//PREDICTED: wound-induced basic protein-like [Solanum lycopersicum]
Solyc10g054820.2.1	1305	957.046120509165	36.6087050121468	-4.70832980445148	1.74818616553525e-14	Down	6.08620053157122e-16	GO:0031224//intrinsic component of membrane	NA	GO:0051234//establishment of localization	K09866//aquaporin-4	gi|460406429|ref|XP_004248667.1|//PREDICTED: probable aquaporin TIP3-2 isoform X2 [Solanum lycopersicum]
Solyc10g086460.2.1	1504	48.3147972854851	4.6000855383523	-3.39273251496415	0.00131497876725585	Down	0.000299972791695461	NA	GO:0005524//ATP binding	NA	K10355//actin, other eukaryote	gi|460408328|ref|XP_004249597.1|//PREDICTED: actin-75 [Solanum lycopersicum];gi|902081773|gb|KNA03135.1|//hypothetical protein SOVF_212020 [Spinacia oleracea]
Solyc08g076220.3.1	1764	110347.901714355	16005.2188827848	-2.78544488475202	9.81154933973152e-28	Down	8.33842720090497e-30	NA	GO:0032559//adenyl ribonucleotide binding;GO:0016301//kinase activity	GO:0044238//primary metabolic process;GO:0006796//phosphate-containing compound metabolic process	K00855//phosphoribulokinase [EC:2.7.1.19]	gi|460400830|ref|XP_004245935.1|//PREDICTED: phosphoribulokinase, chloroplastic [Solanum lycopersicum]
Solyc09g008790.3.1	1793	182.742977941944	22.3908675602882	-3.02883363714084	4.57697526739042e-07	Down	5.00041542743451e-08	NA	NA	NA	K08832//serine/threonine-protein kinase SRPK3 [EC:2.7.11.1]	gi|460402162|ref|XP_004246583.1|//PREDICTED: serine/threonine-protein kinase SRPK [Solanum lycopersicum]
Solyc09g074100.3.1	2515	838.328827986767	288.437363854239	-1.53925817909665	8.95618482927027e-10	Down	6.31286175344792e-11	GO:0044424//intracellular part	GO:0008175//tRNA methyltransferase activity	GO:0006730//one-carbon metabolic process;GO:0008033//tRNA processing	K21027;K00566//tRNA-specific 2-thiouridylase [EC:2.8.1.-]	gi|723731630|ref|XP_010326622.1|//PREDICTED: mitochondrial tRNA-specific 2-thiouridylase 1 [Solanum lycopersicum]
Solyc09g064720.3.1	1250	414.42754780298	1367.53347206306	1.72238433512251	8.11647896241522e-08	Up	7.80244492473119e-09	NA	NA	NA	K01061//carboxymethylenebutenolidase [EC:3.1.1.45]	gi|460403320|ref|XP_004247139.1|//PREDICTED: endo-1,3;1,4-beta-D-glucanase-like [Solanum lycopersicum]
Solyc02g071250.3.1	6076	1562.88598035897	3469.99891971885	1.15072268265198	0.00626463885558681	Up	0.00172704894050693	NA	GO:0004721//phosphoprotein phosphatase activity	GO:0006470//protein dephosphorylation	K17616//CTD small phosphatase-like protein 2 [EC:3.1.3.-]	gi|460374363|ref|XP_004232980.1|//PREDICTED: CTD small phosphatase-like protein 2 [Solanum lycopersicum]
Solyc12g036550.2.1	441	496.856288347303	210.923229362717	-1.23611063374528	0.000207598476356466	Down	3.92323048727927e-05	GO:0016020//membrane;GO:0009507//chloroplast	NA	NA	NA	gi|544163672|ref|YP_008563147.1|//hypothetical chloroplast RF1 (chloroplast) [Solanum lycopersicum]
Solyc01g014480.3.1	2938	422.421248929567	925.308548502233	1.13125211134643	0.00419552918501194	Up	0.00109923865519043	NA	NA	NA	K14514//ethylene-insensitive protein 3	gi|969995360|ref|XP_015071748.1|//PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein isoform X2 [Solanum pennellii];gi|969995358|ref|XP_015071039.1|//PREDICTED: ETHYLENE INSENSITIVE 3-like 3 protein isoform X1 [Solanum pennellii]
Solyc03g080180.3.1	1476	1680.3364963829	758.112929477358	-1.14826549411785	0.00518205617047149	Down	0.00138861643840463	NA	GO:0008171//O-methyltransferase activity;GO:0005515//protein binding	GO:0009699//phenylpropanoid biosynthetic process;GO:0006730//one-carbon metabolic process	K13066//caffeic acid 3-O-methyltransferase [EC:2.1.1.68]	gi|460378539|ref|XP_004235028.1|//PREDICTED: caffeic acid 3-O-methyltransferase [Solanum lycopersicum]
Solyc06g051620.3.1	2774	96.9897002244349	3606.86678562804	5.21677078093067	6.25900226484999e-34	Up	3.26621558475845e-36	GO:0005622//intracellular	GO:0046872//metal ion binding;GO:0060089//molecular transducer activity;GO:0004435//phosphatidylinositol phospholipase C activity;GO:0004871//signal transducer activity;GO:0004629//phospholipase C activity	GO:0016042//lipid catabolic process;GO:0007165//signal transduction;GO:0044238//primary metabolic process;GO:0035556//intracellular signal transduction	K05857//phosphatidylinositol phospholipase C, delta [EC:3.1.4.11]	gi|350535487|ref|NP_001234197.1|//PI-phospholipase C PLC2 [Solanum lycopersicum];gi|970034313|ref|XP_015078474.1|//PREDICTED: uncharacterized protein LOC107022350 [Solanum pennellii];gi|723705640|ref|XP_010322097.1|//PREDICTED: PI-phospholipase C PLC2 isoform X1 [Solanum lycopersicum]
Solyc11g012970.2.1	1756	904.560105187313	331.331764183501	-1.448939849959	0.002017280581179	Down	0.000482438952171034	GO:0044424//intracellular part	GO:0016811//hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	GO:0019752//carboxylic acid metabolic process	K14677//aminoacylase [EC:3.5.1.14]	gi|460409796|ref|XP_004250324.1|//PREDICTED: aminoacylase-1 [Solanum lycopersicum]
Solyc07g056510.3.1	888	75.9893336069297	1304.29666694222	4.10133131679042	2.80685880466946e-10	Up	1.81627660835925e-11	NA	GO:0016829//lyase activity	NA	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|460395241|ref|XP_004243193.1|//PREDICTED: probable glutathione S-transferase parA [Solanum lycopersicum]
Solyc08g079890.2.1	2241	276.403350983039	777.034464040917	1.4912034819526	0.00349715909258346	Up	0.000894840238555185	NA	GO:0004175//endopeptidase activity;GO:0005515//protein binding	GO:0044092//negative regulation of molecular function;GO:0019538//protein metabolic process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K08653//membrane-bound transcription factor site-1 protease [EC:3.4.21.112];K13199//plasminogen activator inhibitor 1 RNA-binding protein	gi|723724635|ref|XP_004245677.2|//PREDICTED: subtilisin-like protease [Solanum lycopersicum]
Solyc04g009370.3.1	1151	2376.57200599244	854.957195689385	-1.47495801653999	0.000136033451396195	Down	2.45923005543293e-05	NA	NA	NA	NA	gi|460382203|ref|XP_004236829.1|//PREDICTED: uncharacterized protein LOC101260333 [Solanum lycopersicum]
Solyc08g080590.3.1	519	324.595982233605	14.6889275983073	-4.46584416537278	7.55936998701404e-06	Down	1.05157182017058e-06	NA	NA	GO:0006952//defense response	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K14297//nuclear pore complex protein Nup98-Nup96	gi|460400217|ref|XP_004245632.1|//PREDICTED: thaumatin-like protein [Solanum lycopersicum]
Solyc08g006720.3.1	1057	3437.61494098377	1286.49690624891	-1.41795996495474	1.53670511785155e-05	Down	2.27172077583094e-06	NA	GO:0004601//peroxidase activity	GO:0008152//metabolic process;GO:0006950//response to stress	K00432//glutathione peroxidase [EC:1.11.1.9]	gi|460397927|ref|XP_004244516.1|//PREDICTED: probable phospholipid hydroperoxide glutathione peroxidase [Solanum lycopersicum]
Solyc10g074540.1.1	1035	919.921927300969	70.271241600507	-3.71050513209736	4.80276113279388e-07	Down	5.27215280157968e-08	NA	NA	NA	NA	gi|460407118|ref|XP_004249003.1|//PREDICTED: protein EXORDIUM-like 5 [Solanum lycopersicum]
Solyc02g085880.2.1	1544	0.76381186101144	50.4766811002942	6.04625592103456	2.08385357803717e-08	Up	1.79816648022814e-09	NA	GO:0016634//oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor;GO:0005506//iron ion binding	GO:0008152//metabolic process	K10717//cytokinin trans-hydroxylase	gi|525313944|ref|NP_001266171.1|//cytokinin hydroxylase-like [Solanum lycopersicum]
Solyc02g064750.3.1	1204	252.034706124317	1417.66469352781	2.49182202923162	6.25209680254948e-16	Up	1.8177409818058e-17	NA	NA	NA	K00472//prolyl 4-hydroxylase [EC:1.14.11.2]	gi|831360248|ref|NP_001296726.1|//probable prolyl 4-hydroxylase 9 [Solanum lycopersicum]
Solyc05g007430.3.1	3937	135.680514309022	40.2450597633857	-1.75332994087058	0.00361692176804808	Down	0.000931059405477115	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K12188//ESCRT-II complex subunit VPS22	gi|460386205|ref|XP_004238790.1|//PREDICTED: uncharacterized protein LOC101263705 [Solanum lycopersicum]
Solyc12g096610.2.1	2251	465.222266514016	1473.98718591358	1.66373192845025	0.00389549137776825	Up	0.00101075426720757	NA	NA	NA	K07759//poly(ADP-ribose) glycohydrolase [EC:3.2.1.143]	gi|723753413|ref|XP_010314792.1|//PREDICTED: poly(ADP-ribose) glycohydrolase 1-like isoform X3 [Solanum lycopersicum];gi|565351496|ref|XP_006342692.1|//PREDICTED: poly(ADP-ribose) glycohydrolase 1-like [Solanum tuberosum];gi|723753410|ref|XP_010314791.1|//PREDICTED: poly(ADP-ribose) glycohydrolase 1-like isoform X2 [Solanum lycopersicum];gi|460415393|ref|XP_004253043.1|//PREDICTED: poly(ADP-ribose) glycohydrolase 1-like isoform X1 [Solanum lycopersicum]
Solyc09g075230.1.1	516	327.798548841801	66.5628044080831	-2.30002134451389	0.00114504720317214	Down	0.000258049626896479	NA	NA	NA	NA	gi|460403868|ref|XP_004247408.1|//PREDICTED: uncharacterized protein At5g01610-like [Solanum lycopersicum]
Solyc05g006810.3.1	2775	562.892896166824	145.85552095128	-1.94832044474897	6.48883353227712e-05	Down	1.09034074711142e-05	NA	GO:0016491//oxidoreductase activity;GO:0071949//FAD binding	GO:0055114//oxidation-reduction process	K03380//phenol 2-monooxygenase [EC:1.14.13.7]	gi|460387420|ref|XP_004239375.1|//PREDICTED: phenol 2-monooxygenase isoform X1 [Solanum lycopersicum]
Solyc07g043230.3.1	1293	1732.27405504784	9082.77022797088	2.39046519371221	0.00466130124353507	Up	0.00123517185553492	NA	NA	NA	K14709//solute carrier family 39 (zinc transporter), member 1/2/3	gi|460396165|ref|XP_004243649.1|//PREDICTED: zinc transporter 5-like [Solanum lycopersicum]
Solyc10g080910.1.1	909	189.663460324975	33.7845842949351	-2.48900475405442	1.01291293182386e-09	Down	7.18493107671393e-11	NA	NA	NA	NA	gi|870864073|gb|KMT15206.1|//hypothetical protein BVRB_3g063170 [Beta vulgaris subsp. vulgaris]
Solyc07g055810.3.1	3215	1179.00858789384	5658.7494793575	2.26290904179474	9.34758090881723e-05	Up	1.62087917056127e-05	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460395338|ref|XP_004243241.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g07650 [Solanum lycopersicum]
Solyc11g005400.2.1	1424	173.60286651376	363.297897132422	1.06536224544394	0.00528911366020179	Up	0.00142357938849634	NA	NA	NA	NA	gi|460408880|ref|XP_004249869.1|//PREDICTED: uncharacterized protein LOC101263069 [Solanum lycopersicum]
Solyc12g010910.2.1	1451	1922.32226053069	485.70008814181	-1.98471255831889	2.90537830379291e-06	Down	3.72648231077657e-07	NA	GO:0016787//hydrolase activity	NA	K00145//N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]	gi|460412843|ref|XP_004251807.1|//PREDICTED: phospholipase A1-IIdelta-like [Solanum lycopersicum]
Solyc03g098780.2.1	908	18830.5519444245	2949.5539452395	-2.67450658718386	0.00720128522765237	Down	0.00202284499312615	NA	GO:0004866//endopeptidase inhibitor activity	GO:0010466//negative regulation of peptidase activity	NA	gi|460379324|ref|XP_004235413.1|//PREDICTED: aspartic protease inhibitor 1-like [Solanum lycopersicum]
Solyc07g055400.2.1	804	20.1808700036477	354.595763787384	4.13511502510945	8.13535765567778e-14	Up	3.11732058671416e-15	GO:0016021//integral component of membrane	GO:0004674//protein serine/threonine kinase activity;GO:0005524//ATP binding	GO:0006468//protein phosphorylation	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|970039550|ref|XP_015081113.1|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Solanum pennellii]
Solyc09g011550.2.1	864	36.7135532768905	2048.31355397767	5.80198001777276	2.09892712618964e-11	Up	1.13755779091984e-12	NA	NA	NA	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|460401756|ref|XP_004246383.1|//PREDICTED: probable glutathione S-transferase [Solanum lycopersicum]
Solyc05g041770.2.1	2195	57.8733936818162	3.38401284043204	-4.09609329807722	2.71988063032822e-05	Down	4.236760531587e-06	NA	NA	NA	NA	gi|970015294|ref|XP_015068675.1|//PREDICTED: guanylate-binding protein 2-like [Solanum pennellii]
Solyc08g016586.1.1	6077	346.629959764361	1347.9974883913	1.95934954910476	6.50883294033909e-05	Up	1.09394392902896e-05	NA	NA	NA	K08592//sentrin-specific protease 1 [EC:3.4.22.68];K18195//rhamnogalacturonan endolyase [EC:4.2.2.23]	gi|723720858|ref|XP_010324752.1|//PREDICTED: uncharacterized protein LOC104648659 [Solanum lycopersicum]
Solyc11g012040.2.1	1880	150.578778995535	28.8444469183069	-2.38415296029701	0.000726389331317121	Down	0.000155794103637942	NA	NA	NA	NA	gi|460409642|ref|XP_004250247.1|//PREDICTED: uncharacterized membrane protein At1g16860 [Solanum lycopersicum]
Solyc03g006130.3.1	2982	661.619769183875	1655.13254946948	1.322872510343	0.000461467246550553	Up	9.41924348483238e-05	GO:0016021//integral component of membrane	GO:0005524//ATP binding;GO:0004672//protein kinase activity	GO:0006468//protein phosphorylation	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K00924	gi|460376607|ref|XP_004234089.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase MRH1 [Solanum lycopersicum]
Solyc04g074960.3.1	1402	225.447477920184	1088.35019890057	2.27127957212296	2.36985375330775e-11	Up	1.30029250218764e-12	NA	NA	NA	K02183//calmodulin	gi|460384537|ref|XP_004237967.1|//PREDICTED: ovarian cancer-associated gene 2 protein homolog isoform X1 [Solanum lycopersicum];gi|723694506|ref|XP_010320195.1|//PREDICTED: UPF0483 protein CG5412 isoform X2 [Solanum lycopersicum]
Solyc01g109760.2.1	1413	102.621262316586	716.520861295616	2.80367903178833	1.81665903336643e-09	Up	1.33737199601115e-10	NA	NA	NA	K14794//ribosomal RNA-processing protein 12	gi|460370156|ref|XP_004230920.1|//PREDICTED: uncharacterized protein LOC101255930 [Solanum lycopersicum]
Solyc12g099340.2.1	2904	239.383792213327	3022.24506920549	3.65822326998601	4.29209048054398e-18	Up	9.6471244959297e-20	GO:0005634//nucleus	GO:0003677//DNA binding	NA	K14674//TAG lipase / steryl ester hydrolase / phospholipase A2 / LPA acyltransferase [EC:3.1.1.3 3.1.1.13 3.1.1.4 2.3.1.51];K10357//myosin V;K16743//abnormal spindle-like microcephaly-associated protein	gi|525313797|ref|NP_001266140.1|//calmodulin-binding transcription factor SR3L [Solanum lycopersicum];gi|723752622|ref|XP_010314664.1|//PREDICTED: calmodulin-binding transcription factor SR3L isoform X1 [Solanum lycopersicum]
Solyc09g009820.3.1	1677	5042.97178520009	2299.35345922271	-1.13304589779645	0.00270499978690507	Down	0.000670502780040209	NA	NA	NA	K03354//anaphase-promoting complex subunit 7	gi|460402028|ref|XP_004246517.1|//PREDICTED: uncharacterized protein LOC101255233 [Solanum lycopersicum]
Solyc10g079700.2.1	1189	169.185205343544	28.6189078367054	-2.56356289365188	0.00394567804702605	Down	0.00102492403241757	NA	NA	NA	K14492//two-component response regulator ARR-A family	gi|460407602|ref|XP_004249241.1|//PREDICTED: two-component response regulator ARR8 [Solanum lycopersicum]
Solyc10g009410.1.1	1377	611.115443974315	2629.42555344384	2.10523080450667	2.72474095492398e-05	Up	4.24534709690705e-06	NA	GO:0008233//peptidase activity	NA	K00924;K02882//large subunit ribosomal protein L18Ae;K01381//saccharopepsin [EC:3.4.23.25]	gi|460405238|ref|XP_004248083.1|//PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 1 [Solanum lycopersicum]
Solyc11g012420.2.1	1466	10.3510348639974	1.1108497563128	-3.22003940216375	0.0192824278418307	Down	0.00616249948993055	GO:0044464//cell part	NA	NA	K03189//urease accessory protein	gi|460409694|ref|XP_004250273.1|//PREDICTED: cytochrome b561 and DOMON domain-containing protein At5g47530 [Solanum lycopersicum]
BGI_novel_G000167	823	0.419846354102344	15.5699860206732	5.2127623793978	0.000324856989447068	Up	6.40317489263491e-05	NA	NA	NA	NA	gi|565389429|ref|XP_006360458.1|//PREDICTED: HMG-Y-related protein A-like [Solanum tuberosum]
Solyc01g103140.3.1	3323	553.779763771996	155.94682658734	-1.82825814054487	2.34195184416686e-05	Down	3.60266708695267e-06	GO:0031224//intrinsic component of membrane	GO:0005254//chloride channel activity	GO:0015698//inorganic anion transport	K05016//chloride channel 7	gi|460369141|ref|XP_004230422.1|//PREDICTED: chloride channel protein CLC-c [Solanum lycopersicum]
Solyc12g095760.2.1	2246	2127.91134149492	835.965553590145	-1.34792264120768	1.12652217181651e-05	Down	1.61327649624237e-06	GO:0043234//protein complex	GO:0008443//phosphofructokinase activity;GO:0032559//adenyl ribonucleotide binding	GO:0006007//glucose catabolic process;GO:0006796//phosphate-containing compound metabolic process	K00895//pyrophosphate--fructose-6-phosphate 1-phosphotransferase [EC:2.7.1.90]	gi|460415534|ref|XP_004253113.1|//PREDICTED: pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit alpha-like [Solanum lycopersicum]
Solyc11g012880.2.1	1957	79.0895479427558	21.4810153374316	-1.88042486191544	0.0231466108777467	Down	0.00762868396380781	GO:0031224//intrinsic component of membrane	NA	NA	K15285//solute carrier family 35, member E3;K12479//vacuolar protein sorting-associated protein 45	gi|460409776|ref|XP_004250314.1|//PREDICTED: GDP-mannose transporter GONST5 [Solanum lycopersicum]
Solyc09g072770.1.1	612	200.36832332081	45.3317988834783	-2.14405913029649	0.0334756346856904	Down	0.0116955093152295	NA	NA	NA	NA	gi|723731723|ref|XP_010326642.1|//PREDICTED: uncharacterized protein LOC104649359 [Solanum lycopersicum]
Solyc01g006250.2.1	870	183.725200182948	34.1747873384439	-2.42654525806069	1.78736986630306e-06	Down	2.2045649648117e-07	NA	NA	NA	NA	NA
Solyc09g059240.3.1	1907	1183.66414598789	94.9121195522488	-3.64052365697689	1.06060066113266e-08	Down	8.79221660339585e-10	NA	GO:0005506//iron ion binding;GO:0004497//monooxygenase activity	NA	K17961//cytochrome P450, family 82, subfamily G, polypeptide 1 [EC:1.14.-.-]	gi|460403149|ref|XP_004247061.1|//PREDICTED: cytochrome P450 82C4-like [Solanum lycopersicum]
Solyc06g073050.2.1	2252	789.169742784506	3031.04731167867	1.9414088228656	9.69987287116511e-07	Up	1.13348372786278e-07	NA	NA	NA	K12581//CCR4-NOT transcription complex subunit 7/8;K13126//polyadenylate-binding protein;K01054//acylglycerol lipase [EC:3.1.1.23]	gi|460391641|ref|XP_004241429.1|//PREDICTED: uncharacterized protein LOC101257973 [Solanum lycopersicum]
Solyc01g099520.3.1	345	450.688234284368	1018.81602314155	1.17669186197713	0.000291644570062229	Up	5.68222069373516e-05	NA	NA	NA	NA	gi|723662817|ref|XP_010313004.1|//PREDICTED: rapid alkalinization factor [Solanum lycopersicum]
Solyc02g091510.3.1	2362	1515.76605678037	3571.03186547837	1.23629390237251	0.0177938177116861	Up	0.00562374311828636	NA	NA	NA	K14190//GDP-L-galactose phosphorylase [EC:2.7.7.69]	gi|460372335|ref|XP_004231986.1|//PREDICTED: GDP-L-galactose phosphorylase 2-like [Solanum lycopersicum]
Solyc02g067320.2.1	1233	1197.98902513201	329.637120773327	-1.86166407140275	1.51465252319777e-05	Down	2.23516823443416e-06	NA	NA	NA	NA	gi|460375134|ref|XP_004233362.1|//PREDICTED: zinc-finger homeodomain protein 9 [Solanum lycopersicum]
Solyc09g092130.3.1	3522	977.458902934512	44.7614456636138	-4.44870750886422	5.99540248339162e-20	Down	1.1285516080635e-21	NA	NA	NA	K00696//sucrose-phosphate synthase [EC:2.4.1.14]	gi|525313846|ref|NP_001266150.1|//sucrose-phosphate synthase B [Solanum lycopersicum]
Solyc11g012730.2.1	811	239.961120207836	586.36453612733	1.28899717901835	0.000622980828874979	Up	0.000131734391017137	NA	NA	NA	K03671//thioredoxin 1;K02995//small subunit ribosomal protein S8e	gi|460409744|ref|XP_004250298.1|//PREDICTED: thioredoxin domain-containing protein 9 homolog [Solanum lycopersicum]
Solyc03g006430.3.1	3319	438.041550655592	110.314676970036	-1.98944297482122	4.6046813744799e-06	Down	6.11795863725185e-07	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460376666|ref|XP_004234118.1|//PREDICTED: uncharacterized protein LOC101259611 isoform X2 [Solanum lycopersicum]
Solyc11g069660.2.1	2152	344.249358524702	78.2026780468701	-2.13816404752837	0.000102943835307401	Down	1.80155548966843e-05	NA	NA	NA	K06695//26S proteasome regulatory subunit, ATPase 3, interacting protein;K01657//anthranilate synthase component I [EC:4.1.3.27];K19613//leucine-rich repeat protein SHOC2;K01674//carbonic anhydrase [EC:4.2.1.1];K12818//ATP-dependent RNA helicase DHX8/PRP22 [EC:3.6.4.13]	gi|970063474|ref|XP_015058669.1|//PREDICTED: putative disease resistance RPP13-like protein 1 [Solanum pennellii];gi|565393803|ref|XP_006362560.1|//PREDICTED: homologous-pairing protein 2 homolog [Solanum tuberosum];gi|723746815|ref|XP_010313601.1|//PREDICTED: putative disease resistance RPP13-like protein 1, partial [Solanum lycopersicum]
Solyc07g066370.3.1	978	166.929652909581	345.022217090299	1.04744901093987	0.0138878140953506	Up	0.00423498610086712	NA	NA	NA	K20002//SNARE-associated protein Snapin	gi|723717773|ref|XP_010324213.1|//PREDICTED: uncharacterized protein LOC101260451 isoform X1 [Solanum lycopersicum]
Solyc01g098800.3.1	2479	322.550506299663	705.097040979909	1.12829674475911	0.0098132836755127	Up	0.00286373184343182	NA	NA	NA	K13754//solute carrier family 24 (sodium/potassium/calcium exchanger), member 6	gi|460368650|ref|XP_004230178.1|//PREDICTED: cation/calcium exchanger 5 [Solanum lycopersicum]
Solyc11g065260.2.1	5004	564.729872584126	1136.00197282002	1.00833248741474	0.002153207627426	Up	0.000518558017026965	NA	NA	NA	K09527//DnaJ homolog subfamily C member 7	gi|460411023|ref|XP_004250914.1|//PREDICTED: uncharacterized protein LOC101267085 [Solanum lycopersicum]
Solyc09g055350.3.1	3059	2120.25009052974	742.386059322957	-1.51399292087961	2.54399347474691e-06	Down	3.22882726312556e-07	GO:0031224//intrinsic component of membrane	GO:0032559//adenyl ribonucleotide binding;GO:0042626//ATPase activity, coupled to transmembrane movement of substances	GO:0006810//transport;GO:0009207//purine ribonucleoside triphosphate catabolic process	K05663//mitochondrial ABC transporter ATM	gi|460403043|ref|XP_004247015.1|//PREDICTED: ABC transporter B family member 25, mitochondrial-like [Solanum lycopersicum];gi|970052908|ref|XP_015088077.1|//PREDICTED: ABC transporter B family member 25, mitochondrial [Solanum pennellii]
Solyc02g083740.2.1	7681	175.905907662811	482.234175488545	1.45492996161034	1.75071909191527e-06	Up	2.15674914223198e-07	NA	NA	NA	K11323//histone arginine demethylase JMJD6 [EC:1.14.11.-]	gi|970006962|ref|XP_015064349.1|//PREDICTED: oligopeptide transporter 7-like [Solanum pennellii]
Solyc08g022215.1.1	675	6.28770179125138	0.359424234728661	-4.12877320292232	0.0100534884349758	Down	0.00294282259877238	GO:0031224//intrinsic component of membrane;GO:0009534//chloroplast thylakoid	NA	GO:0043623//cellular protein complex assembly	K02956//small subunit ribosomal protein S15	gi|937631732|gb|ALI89446.1|//CcsA, partial (chloroplast) [Emmotum nitens]
Solyc09g005610.3.1	837	13.1415367543558	0.810632007514781	-4.01894304139006	0.00379748047959963	Down	0.000983200365711161	NA	NA	NA	K14431//transcription factor TGA	gi|460402872|ref|XP_004246934.1|//PREDICTED: transcription factor TGA2-like [Solanum lycopersicum]
Solyc02g062500.3.1	1651	143.631292844813	418.473373830041	1.54276572913999	0.00195378242973902	Up	0.000465723819821866	NA	NA	NA	K05278//flavonol synthase [EC:1.14.11.23];K04125//gibberellin 2-oxidase [EC:1.14.11.13]	gi|460375491|ref|XP_004233539.1|//PREDICTED: probable 2-oxoglutarate-dependent dioxygenase AOP1 [Solanum lycopersicum]
Solyc01g100180.3.1	1588	473.160984181708	202.50119239168	-1.22440071403792	0.00178707774932911	Down	0.000421789783388695	NA	GO:0016740//transferase activity	NA	NA	gi|460368851|ref|XP_004230278.1|//PREDICTED: exonuclease DPD1, chloroplastic/mitochondrial [Solanum lycopersicum]
Solyc02g085580.3.1	3716	560.144900188828	2535.53742933337	2.17841958964818	6.19798784377893e-08	Up	5.83342750318392e-09	NA	NA	NA	K14794//ribosomal RNA-processing protein 12;K15340//DNA cross-link repair 1A protein;K12309//beta-galactosidase [EC:3.2.1.23]	gi|460373151|ref|XP_004232386.1|//PREDICTED: zinc finger protein NUTCRACKER isoform X1 [Solanum lycopersicum]
Solyc06g051560.3.1	1088	40.4390052589126	5.10977554512461	-2.98441568443103	4.97258287181835e-05	Down	8.12947237058122e-06	NA	NA	NA	K03809//NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]	gi|723706223|ref|XP_010322193.1|//PREDICTED: uncharacterized protein LOC101267028 isoform X1 [Solanum lycopersicum]
Solyc05g055700.3.1	1985	508.935451436819	187.415087472799	-1.44124559117778	4.47924336108735e-05	Down	7.24612948677467e-06	NA	GO:0046914//transition metal ion binding;GO:0003824//catalytic activity	GO:0008152//metabolic process	K08070//2-alkenal reductase [EC:1.3.1.74]	gi|460388083|ref|XP_004239700.1|//PREDICTED: 2-alkenal reductase (NADP(+)-dependent) [Solanum lycopersicum]
Solyc10g081730.2.1	1831	81.2226956587987	19.6074916710825	-2.05047792134211	0.000935356979807419	Down	0.000206818905778202	NA	NA	NA	NA	gi|723738942|ref|XP_010312207.1|//PREDICTED: cell wall protein RBR3 [Solanum lycopersicum]
Solyc01g009160.2.1	1150	198.348393482759	1439.24149367723	2.85920006797024	2.24841138718403e-22	Up	3.26852706501332e-24	GO:0016021//integral component of membrane	NA	NA	K20131//Rab5 GDP/GTP exchange factor	gi|460365156|ref|XP_004228470.1|//PREDICTED: protein YLS9 [Solanum lycopersicum]
Solyc03g110960.3.1	2695	804.384170077417	321.867260290517	-1.3214188541712	0.000168334195976286	Down	3.1172069688765e-05	NA	NA	NA	K00940//nucleoside-diphosphate kinase [EC:2.7.4.6];K15356//GDP-mannose transporter	gi|460381226|ref|XP_004236353.1|//PREDICTED: GDP-mannose transporter GONST3-like [Solanum lycopersicum]
Solyc01g107470.3.1	959	324.163996464742	119.44233430298	-1.44040959971647	0.000582678551461585	Down	0.000122191349728749	NA	NA	NA	NA	gi|460369764|ref|XP_004230727.1|//PREDICTED: LYR motif-containing protein At3g19508 [Solanum lycopersicum]
Solyc06g084170.3.1	406	23.149588509181	164.095754200161	2.82547945667079	1.37779409894991e-07	Up	1.37430185209108e-08	NA	NA	NA	NA	gi|970033574|ref|XP_015078086.1|//PREDICTED: uncharacterized protein LOC107021881 [Solanum pennellii]
Solyc01g099560.3.1	1377	75.0141642552496	1.17212106357119	-5.99996953994617	1.87649170180658e-09	Down	1.38911306090199e-10	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K15095//(+)-neomenthol dehydrogenase [EC:1.1.1.208]	gi|970001925|ref|XP_015060090.1|//PREDICTED: (+)-neomenthol dehydrogenase-like [Solanum pennellii]
Solyc06g005650.2.1	860	819.153829295636	3651.9148675117	2.15644682715971	0.000316480402872073	Up	6.21896197509481e-05	NA	NA	NA	K11982//E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]	gi|460389460|ref|XP_004240370.1|//PREDICTED: E3 ubiquitin-protein ligase RING1 [Solanum lycopersicum]
Solyc08g015620.3.1	1360	1624.91269863681	570.794866155795	-1.50931794473775	5.5345143288693e-12	Down	2.74786532207168e-13	NA	NA	NA	K08333//phosphoinositide-3-kinase, regulatory subunit 4 [EC:2.7.11.1]	gi|460398462|ref|XP_004244778.1|//PREDICTED: uncharacterized protein LOC101258678 [Solanum lycopersicum]
Solyc10g078230.2.1	1118	4.14874901773517	138.98709272368	5.06613071784978	3.92128643308029e-07	Up	4.25190928650312e-08	NA	NA	NA	K09754//coumaroylquinate(coumaroylshikimate) 3'-monooxygenase [EC:1.14.13.36]	gi|460407349|ref|XP_004249115.1|//PREDICTED: cytochrome P450 98A2-like [Solanum lycopersicum];gi|971588228|ref|XP_015161343.1|//PREDICTED: cytochrome P450 98A2-like [Solanum tuberosum]
Solyc02g094180.3.1	5274	37.6800759802685	343.442032712094	3.18819283752668	8.56572418835535e-08	Up	8.26304390914852e-09	NA	NA	NA	K00430//peroxidase [EC:1.11.1.7]	gi|460371906|ref|XP_004231775.1|//PREDICTED: probable transporter mch1 [Solanum lycopersicum]
Solyc07g062550.3.1	2659	259.713955708611	74.3587537603587	-1.80434904294435	0.00266689278627266	Down	0.000660062923097155	GO:0044424//intracellular part	GO:0016765//transferase activity, transferring alkyl or aryl (other than methyl) groups	GO:0000270//peptidoglycan metabolic process;GO:0019276//UDP-N-acetylgalactosamine metabolic process	K00800//3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19];K03846//alpha-1,2-mannosyltransferase [EC:2.4.1.259 2.4.1.261]	gi|460397428|ref|XP_004244269.1|//PREDICTED: uncharacterized protein LOC101267142 isoform X2 [Solanum lycopersicum];gi|723718825|ref|XP_010324388.1|//PREDICTED: uncharacterized protein LOC101267142 isoform X1 [Solanum lycopersicum]
Solyc08g042080.3.1	1576	1807.43304637227	668.81858361261	-1.4342553662838	2.07558623332551e-10	Down	1.3190974086104e-11	NA	NA	NA	NA	gi|460398819|ref|XP_004244949.1|//PREDICTED: uncharacterized protein LOC101264041 [Solanum lycopersicum]
Solyc05g013780.2.1	2606	892.266179228736	1925.69589146754	1.10983382715751	0.000888668305844196	Up	0.000195336104054094	NA	NA	NA	K20283//golgin subfamily A member 4;K20478//golgin subfamily B member 1	gi|460386933|ref|XP_004239148.1|//PREDICTED: centrosomal protein of 63 kDa [Solanum lycopersicum]
Solyc10g045270.2.1	1690	160.182232042745	473.223708751169	1.56280822726464	2.24904493045233e-05	Up	3.4446569327675e-06	NA	NA	NA	K01738//cysteine synthase A [EC:2.5.1.47];K04424//sterile alpha motif and leucine zipper containing kinase AZK [EC:2.7.11.25];K14510//serine/threonine-protein kinase CTR1 [EC:2.7.11.1];K09285//AP2-like factor, ANT lineage;K02350//DNA polymerase zeta [EC:2.7.7.7];K17535//serine/threonine-protein kinase TNNI3K [EC:2.7.11.1];K04365//B-Raf proto-oncogene serine/threonine-protein kinase [EC:2.7.11.1]	gi|113205226|gb|ABI34306.1|//Polyprotein, putative [Solanum demissum];gi|723736950|ref|XP_010327514.1|//PREDICTED: serine/threonine-protein kinase HT1-like isoform X1 [Solanum lycopersicum];gi|698515140|ref|XP_009802442.1|//PREDICTED: serine/threonine-protein kinase HT1-like [Nicotiana sylvestris]
Solyc01g105435.1.1	3636	38.6784330180363	96.9677996230709	1.32597639892588	0.0100486912380625	Up	0.00294104381993688	NA	NA	NA	K05681//ATP-binding cassette, subfamily G (WHITE), member 2	gi|970004199|ref|XP_015062890.1|//PREDICTED: ABC transporter G family member 11-like [Solanum pennellii]
Solyc03g007620.3.1	1898	845.956077186822	325.005320119852	-1.38011942495596	6.42307407939282e-06	Down	8.78659679117775e-07	NA	NA	NA	NA	gi|723679241|ref|XP_010317494.1|//PREDICTED: uncharacterized protein LOC101258037 isoform X2 [Solanum lycopersicum];gi|460376826|ref|XP_004234197.1|//PREDICTED: uncharacterized protein LOC101258037 isoform X1 [Solanum lycopersicum]
Solyc01g088740.3.1	2219	665.987173291244	1379.51985314104	1.0505999223447	0.00530865516386422	Up	0.00142966428950794	GO:0043234//protein complex;GO:0005956//protein kinase CK2 complex	GO:0019207//kinase regulator activity;GO:0016301//kinase activity;GO:0019887//protein kinase regulator activity;GO:0000166//nucleotide binding;GO:0016772//transferase activity, transferring phosphorus-containing groups;GO:0003676//nucleic acid binding	GO:0045859//regulation of protein kinase activity;GO:0006796//phosphate-containing compound metabolic process	K09537//DnaJ homolog subfamily C member 17;K03115//casein kinase II subunit beta	gi|723660244|ref|XP_010325123.1|//PREDICTED: casein kinase II subunit beta isoform X2 [Solanum lycopersicum];gi|460367725|ref|XP_004229721.1|//PREDICTED: putative casein kinase II subunit beta-4 isoform X1 [Solanum lycopersicum];gi|460367723|ref|XP_004229720.1|//PREDICTED: dnaJ homolog subfamily C member 17 [Solanum lycopersicum]
Solyc09g059510.3.1	1421	829.635578768376	2183.14258101442	1.3958566855001	7.7762953202503e-05	Up	1.32435862972356e-05	NA	NA	NA	NA	gi|460403173|ref|XP_004247071.1|//PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 isoform X2 [Solanum lycopersicum]
Solyc08g007460.2.1	741	615.477114986879	23412.5289369349	5.24943175274071	5.68042923670716e-13	Up	2.43495363881513e-14	NA	NA	NA	K14998//surfeit locus 1 family protein	gi|460398045|ref|XP_004244575.1|//PREDICTED: protein YLS3-like [Solanum lycopersicum]
Solyc12g014310.2.1	1026	132.414786741703	480.529904137677	1.85956197828682	1.47217008609058e-06	Up	1.78451510361061e-07	NA	NA	NA	NA	gi|460413029|ref|XP_004251898.1|//PREDICTED: pathogen-related protein-like [Solanum lycopersicum]
Solyc10g051130.2.1	2281	35.058155296987	242.260777825941	2.78873885950539	2.27858987645203e-08	Up	1.97639728735049e-09	GO:0044464//cell part;GO:0016021//integral component of membrane	GO:0015291//secondary active transmembrane transporter activity;GO:0015238//drug transmembrane transporter activity;GO:0015297//antiporter activity	GO:0015893//drug transport;GO:0006855//drug transmembrane transport	K03327//multidrug resistance protein, MATE family	gi|460406555|ref|XP_004248728.1|//PREDICTED: protein TRANSPARENT TESTA 12 isoform X2 [Solanum lycopersicum];gi|1000966614|ref|XP_015574571.1|//PREDICTED: protein DETOXIFICATION 33 isoform X2 [Ricinus communis];gi|255556131|ref|XP_002519100.1|//PREDICTED: protein DETOXIFICATION 33 isoform X1 [Ricinus communis];gi|697191941|ref|XP_009605041.1|//PREDICTED: protein TRANSPARENT TESTA 12-like [Nicotiana tomentosiformis]
Solyc06g073180.3.1	1609	6552.77774060081	291.808023071928	-4.48901514384852	5.05306436646657e-35	Down	2.46739015956136e-37	GO:0044464//cell part	GO:0046914//transition metal ion binding	NA	K12135//zinc finger protein CONSTANS;K19720//collagen, type III, alpha	gi|350534976|ref|NP_001234169.1|//CONSTANS interacting protein 1 [Solanum lycopersicum]
Solyc01g098170.3.1	3249	610.387049298847	228.563807030811	-1.41712738098454	0.000128823610154666	Down	2.31256339087846e-05	GO:0005634//nucleus	NA	GO:0009910//negative regulation of flower development;GO:0035281//pre-miRNA export from nucleus;GO:0009965//leaf morphogenesis;GO:0048364//root development;GO:0009944//polarity specification of adaxial/abaxial axis	K14289//exportin-5	gi|460368583|ref|XP_004230145.1|//PREDICTED: protein HASTY 1 [Solanum lycopersicum];gi|697191069|ref|XP_009604602.1|//PREDICTED: protein HASTY 1 isoform X1 [Nicotiana tomentosiformis]
Solyc01g067730.3.1	1083	2590.66839618064	7759.59536919702	1.58265706045818	1.21293971717949e-06	Up	1.44947660956589e-07	NA	NA	NA	K03955//NADH dehydrogenase (ubiquinone) 1 alpha/beta subcomplex 1;K00850//6-phosphofructokinase 1 [EC:2.7.1.11]	gi|460366652|ref|XP_004229194.1|//PREDICTED: acyl carrier protein 1, chloroplastic-like [Solanum lycopersicum]
Solyc05g054860.1.1	2436	709.750710772362	1749.68492990276	1.30171086194265	0.0174062000003935	Up	0.00547787932769205	NA	GO:0004672//protein kinase activity	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460388210|ref|XP_004239762.1|//PREDICTED: receptor-like protein kinase HERK 1 [Solanum lycopersicum]
Solyc08g067550.1.1	387	0.527108253707005	203.996097690283	8.59622655668942	4.08067788767678e-14	Up	1.50736237762326e-15	NA	NA	NA	NA	gi|460399388|ref|XP_004245223.1|//PREDICTED: non-specific lipid-transfer protein 1-like [Solanum lycopersicum]
Solyc11g071750.2.1	351	6.08408368159621	91.9678704132482	3.91801803268677	9.45189687210379e-05	Up	1.64108154280078e-05	NA	GO:0046872//metal ion binding	NA	K13448//calcium-binding protein CML	gi|350537863|ref|NP_001234570.1|//regulator of gene silencing [Solanum lycopersicum]
Solyc11g011548.1.1	1617	607.647509601166	134.575161914069	-2.17482251184108	2.00883170346243e-15	Down	6.16247387784994e-17	NA	NA	NA	K05350//beta-glucosidase [EC:3.2.1.21];K00423//L-ascorbate oxidase [EC:1.10.3.3]	gi|723741947|ref|XP_010312711.1|//PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like [Solanum lycopersicum];gi|970060528|ref|XP_015057029.1|//PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like isoform X1 [Solanum pennellii]
Solyc04g016550.3.1	3789	1811.79760270533	585.605327826774	-1.62942121541202	2.15312593113976e-08	Down	1.86195473395119e-09	NA	NA	NA	K18577//mannosylglycoprotein endo-beta-mannosidase [EC:3.2.1.152];K01930//folylpolyglutamate synthase [EC:6.3.2.17]	gi|723688676|ref|XP_010319152.1|//PREDICTED: LOW QUALITY PROTEIN: folylpolyglutamate synthase [Solanum lycopersicum];gi|697101793|ref|XP_009597818.1|//PREDICTED: folylpolyglutamate synthase {ECO:0000250|UniProtKB:Q05932, ECO:0000312|EMBL:CAC81075.1} isoform X7 [Nicotiana tomentosiformis];gi|147822732|emb|CAN70538.1|//hypothetical protein VITISV_040070 [Vitis vinifera]
Solyc04g079690.3.1	6667	245.170964417224	42.0484245915936	-2.54366447702323	4.10071500845758e-11	Down	2.33405092363006e-12	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460385808|ref|XP_004238593.1|//PREDICTED: inactive protein kinase SELMODRAFT_444075-like isoform X1 [Solanum lycopersicum];gi|723695566|ref|XP_010320365.1|//PREDICTED: inactive protein kinase SELMODRAFT_444075-like isoform X2 [Solanum lycopersicum]
Solyc05g052630.3.1	3004	5019.94159995249	1382.62837597221	-1.86025714072632	7.25117883970281e-05	Down	1.22681902316278e-05	NA	NA	NA	NA	gi|460388568|ref|XP_004239939.1|//PREDICTED: uncharacterized protein LOC101257080 [Solanum lycopersicum]
Solyc03g113720.3.1	1213	158.904694958083	26.0964482310359	-2.60623637868863	5.50517253612678e-05	Down	9.10483470359122e-06	NA	GO:0004871//signal transducer activity;GO:0016772//transferase activity, transferring phosphorus-containing groups	GO:0007165//signal transduction;GO:0006351//transcription, DNA-templated;GO:0006796//phosphate-containing compound metabolic process	K14492//two-component response regulator ARR-A family	gi|460380828|ref|XP_004236156.1|//PREDICTED: two-component response regulator ARR15-like [Solanum lycopersicum]
Solyc10g080900.2.1	1267	174.037511656777	830.506840203031	2.25459375567238	3.30989882923518e-09	Up	2.54152064567783e-10	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K00059//3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100];K10256//omega-6 fatty acid desaturase / acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.6 1.14.19.22]	gi|460407762|ref|XP_004249319.1|//PREDICTED: carbonyl reductase [NADPH] 2-like [Solanum lycopersicum]
Solyc02g069455.1.1	1122	302.752413619207	33.6878159051908	-3.16783965968174	3.80462249948559e-05	Down	6.08671528544511e-06	GO:0009534//chloroplast thylakoid;GO:0009522//photosystem I	NA	GO:0044237//cellular metabolic process	K02694//photosystem I subunit III	gi|970009539|ref|XP_015065654.1|//PREDICTED: photosystem I reaction center subunit III, chloroplastic-like [Solanum pennellii];gi|460374802|ref|XP_004233198.1|//PREDICTED: photosystem I reaction center subunit III, chloroplastic-like [Solanum lycopersicum]
Solyc04g078660.1.1	1347	95.5391787118202	1482.44464016766	3.95574194516151	2.08642498683294e-27	Up	1.85871317971177e-29	NA	GO:0016740//transferase activity	NA	K19747//BAHD acyltransferase [EC:2.3.1.-]	gi|460384885|ref|XP_004238137.1|//PREDICTED: uncharacterized acetyltransferase At3g50280 [Solanum lycopersicum]
Solyc05g055300.1.1	756	257.068914876269	603.831782770903	1.23199152724006	0.00470548395104901	Up	0.00124775655389006	NA	NA	NA	K20363//protein transport protein YIP1	gi|460388131|ref|XP_004239723.1|//PREDICTED: protein YIPF5 homolog [Solanum lycopersicum]
Solyc01g098500.3.1	1850	1309.95557864053	429.662410708879	-1.60824241731423	2.59091584981794e-06	Down	3.29417547477598e-07	GO:0016021//integral component of membrane	GO:0022891//substrate-specific transmembrane transporter activity	GO:0055085//transmembrane transport	K08145//MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8	gi|723662395|ref|XP_010312440.1|//PREDICTED: sugar transporter ERD6-like 5 isoform X2 [Solanum lycopersicum];gi|970000793|ref|XP_015055150.1|//PREDICTED: sugar transporter ERD6-like 5 isoform X2 [Solanum pennellii];gi|985482426|ref|NP_001306259.1|//sugar transporter ERD6-like 5 [Solanum lycopersicum]
Solyc09g009540.3.1	1436	58.5005979364801	373.661505385324	2.67520866918996	2.84350260417506e-06	Up	3.64076019283633e-07	NA	NA	NA	NA	gi|460402072|ref|XP_004246538.1|//PREDICTED: uncharacterized protein LOC101261444 [Solanum lycopersicum]
Solyc04g074740.3.1	1297	29.0157378405479	275.004811341204	3.24454933877022	1.42100856536533e-08	Up	1.19971089926661e-09	NA	GO:0046914//transition metal ion binding	NA	K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6];K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460384501|ref|XP_004237949.1|//PREDICTED: blue copper protein [Solanum lycopersicum]
Solyc06g007340.3.1	1465	3197.82539232411	1510.11680489725	-1.08243102312013	0.00117098938625188	Down	0.000264376126156539	NA	NA	NA	K08059//interferon, gamma-inducible protein 30	gi|460389556|ref|XP_004240417.1|//PREDICTED: GILT-like protein F37H8.5 [Solanum lycopersicum]
Solyc07g053970.3.1	3156	1112.33803030714	2365.5264647154	1.08856602357153	0.0134481639260445	Up	0.00408560292609723	GO:0031224//intrinsic component of membrane;GO:0016021//integral component of membrane	GO:0046872//metal ion binding;GO:0005244//voltage-gated ion channel activity;GO:0005509//calcium ion binding;GO:0005262//calcium channel activity;GO:0005261//cation channel activity	GO:0070588//calcium ion transmembrane transport;GO:0034220//ion transmembrane transport;GO:0006952//defense response;GO:0006950//response to stress;GO:0034765//regulation of ion transmembrane transport;GO:0006816//calcium ion transport	K16900//two pore calcium channel protein, plant	gi|460395566|ref|XP_004243353.1|//PREDICTED: two pore calcium channel protein 1B [Solanum lycopersicum]
Solyc10g085350.2.1	369	273.506894709801	1469.40101459356	2.42557906906349	6.82195431228621e-15	Up	2.23791079733589e-16	NA	NA	NA	K07253//phenylpyruvate tautomerase [EC:5.3.2.1]	gi|460408505|ref|XP_004249685.1|//PREDICTED: macrophage migration inhibitory factor homolog [Solanum lycopersicum]
Solyc12g098590.2.1	1718	119.748122441983	5.63253881775071	-4.4100738744582	6.12370888159645e-07	Down	6.85459138640008e-08	NA	NA	NA	K13692//UDP-glucose:(indol-3-yl)acetate beta-D-glucosyltransferase [EC:2.4.1.121]	gi|460415261|ref|XP_004252978.1|//PREDICTED: crocetin glucosyltransferase, chloroplastic-like [Solanum lycopersicum]
Solyc09g008295.1.1	2256	9331.81050256106	24784.4622835773	1.40920704237314	0.00022988502858113	Up	4.37439641757369e-05	GO:0044424//intracellular part;GO:0005829//cytosol	GO:0016765//transferase activity, transferring alkyl or aryl (other than methyl) groups;GO:0046872//metal ion binding;GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0004478//methionine adenosyltransferase activity	GO:0006730//one-carbon metabolic process;GO:0044237//cellular metabolic process;GO:0006556//S-adenosylmethionine biosynthetic process	K00789//S-adenosylmethionine synthetase [EC:2.5.1.6]	gi|734319203|gb|KHN03243.1|//S-adenosylmethionine synthase [Glycine soja];gi|350536693|ref|NP_001234004.1|//S-adenosylmethionine synthase 3 [Solanum lycopersicum]
Solyc06g050720.3.1	1880	719.894696924505	6270.12444784684	3.12263628163437	8.34275504218631e-18	Up	1.95290374477896e-19	GO:0044424//intracellular part	GO:0016876//ligase activity, forming aminoacyl-tRNA and related compounds;GO:0032559//adenyl ribonucleotide binding;GO:0016788//hydrolase activity, acting on ester bonds	GO:0006412//translation	NA	gi|460390556|ref|XP_004240895.1|//PREDICTED: staphylococcal-like nuclease CAN2 [Solanum lycopersicum]
Solyc04g081470.3.1	1146	811.989385528163	269.867469573809	-1.5892097867536	0.0311770747722445	Down	0.0107797281044931	NA	NA	NA	K11131//H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-];K11294//nucleolin	gi|460385338|ref|XP_004238361.1|//PREDICTED: probable replication factor C subunit 1 [Solanum lycopersicum]
Solyc05g050500.1.1	726	4461.05457949594	851.367507798897	-2.3895308628729	4.32722680573383e-19	Down	8.80671625141893e-21	NA	NA	NA	K02113//F-type H+-transporting ATPase subunit delta	gi|970030682|ref|XP_015076626.1|//PREDICTED: ATP synthase subunit delta, chloroplastic [Solanum pennellii]
Solyc03g112970.1.1	834	43.636945125212	386.491658218282	3.14681526419145	1.85072497690445e-07	Up	1.88880460219338e-08	NA	NA	NA	K01051//pectinesterase [EC:3.1.1.11]	gi|723687732|ref|XP_010318981.1|//PREDICTED: uncharacterized protein LOC101250877 [Solanum lycopersicum]
Solyc12g013665.1.1	3980	54.8089981405852	193.893216951863	1.82277766505224	0.0228454934630828	Up	0.00751496495496144	NA	NA	NA	K19355//mannan endo-1,4-beta-mannosidase [EC:3.2.1.78];K10406//kinesin family member C2/C3	gi|970065564|ref|XP_015059741.1|//PREDICTED: receptor-like protein 12 [Solanum pennellii]
Solyc03g005130.2.1	2133	830.578354800593	2578.13807124873	1.63414134861421	0.00357923677048629	Up	0.000919891066516437	NA	GO:0000166//nucleotide binding;GO:0004672//protein kinase activity	GO:0009987//cellular process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460376448|ref|XP_004234010.1|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g34300 [Solanum lycopersicum]
Solyc03g006610.3.1	1665	173.093743471572	1309.97472090941	2.91991348769689	1.26295614675044e-07	Up	1.25363508975564e-08	NA	NA	NA	K12486//stromal membrane-associated protein	gi|723678941|ref|XP_010317446.1|//PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD5 isoform X2 [Solanum lycopersicum];gi|460376692|ref|XP_004234131.1|//PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD5 isoform X1 [Solanum lycopersicum];gi|723678944|ref|XP_010317448.1|//PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD5 isoform X3 [Solanum lycopersicum]
Solyc06g074530.1.1	1302	1025.32928305932	11427.1990679925	3.47831261773959	8.47018015697587e-23	Up	1.19342779906697e-24	NA	GO:0016836//hydro-lyase activity	GO:0006558//L-phenylalanine metabolic process	K05359//arogenate/prephenate dehydratase [EC:4.2.1.91 4.2.1.51]	gi|460391391|ref|XP_004241304.1|//PREDICTED: arogenate dehydratase/prephenate dehydratase 6, chloroplastic-like [Solanum lycopersicum]
Solyc08g080750.3.1	993	302.605094804723	87.4469852406025	-1.79095572486597	0.000163788646395448	Down	3.02265390004421e-05	NA	NA	NA	K03239//translation initiation factor eIF-2B subunit alpha	gi|460400195|ref|XP_004245621.1|//PREDICTED: protein LURP-one-related 4-like [Solanum lycopersicum]
Solyc11g067250.2.1	3930	0.546827298188976	296.364801746589	9.08207313284657	2.43178318027484e-16	Up	6.72574593620073e-18	NA	GO:0005524//ATP binding	NA	K10798//poly [ADP-ribose] polymerase [EC:2.4.2.30];K12196//vacuolar protein-sorting-associated protein 4	gi|697177715|ref|XP_009597829.1|//PREDICTED: poly [ADP-ribose] polymerase 3-like isoform X2 [Nicotiana tomentosiformis];gi|460411971|ref|XP_004251377.1|//PREDICTED: poly [ADP-ribose] polymerase 3-like [Solanum lycopersicum];gi|460411292|ref|XP_004251047.1|//PREDICTED: vacuolar protein sorting-associated protein 4 isoform X1 [Solanum lycopersicum]
Solyc02g078515.1.1	1080	12.3807559661191	78.1888150455935	2.65886283607746	0.00849739651629512	Up	0.00243063295311051	NA	NA	NA	NA	gi|723674577|ref|XP_010316732.1|//PREDICTED: mediator of RNA polymerase II transcription subunit 16 isoform X2 [Solanum lycopersicum]
Solyc01g091930.3.1	2241	37.1670177398032	10.4378970801012	-1.83219184996132	0.0062475273471849	Down	0.00172186585675731	NA	GO:0004175//endopeptidase activity;GO:0005515//protein binding;GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	GO:0044092//negative regulation of molecular function;GO:0019538//protein metabolic process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13199//plasminogen activator inhibitor 1 RNA-binding protein	gi|723660872|ref|XP_010326073.1|//PREDICTED: xylem serine proteinase 1 [Solanum lycopersicum]
Solyc08g042000.3.1	3699	84.7718633544289	28.1282108111151	-1.5915677109176	0.0097289194575734	Down	0.00283491443334859	NA	NA	GO:0008152//metabolic process	K00696//sucrose-phosphate synthase [EC:2.4.1.14]	gi|525314321|ref|NP_001266250.1|//sucrose-phosphate synthase A2 [Solanum lycopersicum]
Solyc03g111510.3.1	1358	7.91597994154394	62.9032900655377	2.99029561532431	2.83434714775388e-05	Up	4.42351703729145e-06	NA	NA	NA	NA	gi|460381155|ref|XP_004236318.1|//PREDICTED: RING-H2 finger protein ATL47-like isoform X1 [Solanum lycopersicum]
Solyc11g062360.2.1	2876	231.495494382703	109.386963984445	-1.0815432969449	0.0104008263028028	Down	0.00305224785604467	NA	NA	NA	NA	gi|460410959|ref|XP_004250882.1|//PREDICTED: uncharacterized protein LOC101257138 [Solanum lycopersicum]
Solyc06g009670.3.1	3679	181.152888466928	56.0950627463062	-1.69126210809234	0.0017926328010904	Down	0.000423368176073833	NA	GO:0005488//binding	NA	K07953//GTP-binding protein SAR1 [EC:3.6.5.-]	gi|460389878|ref|XP_004240574.1|//PREDICTED: uncharacterized protein LOC101267897 [Solanum lycopersicum]
Solyc12g099930.2.1	1539	23274.8290659013	711.953486632096	-5.03084377214062	5.07385766192116e-28	Down	4.17967251857976e-30	NA	GO:0048037//cofactor binding;GO:0003824//catalytic activity	NA	K00830//alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]	gi|525314083|ref|NP_001265946.1|//Hop-interacting protein THI032 [Solanum lycopersicum]
Solyc03g031890.3.1	997	34.9557396634988	218.966175730003	2.64710676236929	0.00559268270961087	Up	0.0015169953808647	NA	NA	NA	NA	gi|460377424|ref|XP_004234493.1|//PREDICTED: uncharacterized protein LOC101258531 [Solanum lycopersicum]
Solyc02g068670.2.1	2565	142.585930646805	4318.9631703331	4.92078147495659	3.64669759990689e-09	Up	2.81644454562661e-10	NA	NA	NA	K15502//serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A	gi|723676452|ref|XP_010317038.1|//PREDICTED: ankyrin repeat-containing protein At5g02620-like [Solanum lycopersicum]
Solyc08g078410.1.1	444	8.11644120125808	1.04486239968944	-2.95753432760268	0.0384333545453022	Down	0.0137083930834947	NA	NA	NA	K09286//EREBP-like factor	gi|970046153|ref|XP_015084575.1|//PREDICTED: ethylene-responsive transcription factor ERF038-like [Solanum pennellii]
Solyc04g006950.3.1	562	60.2298604022502	712.818494693492	3.56498394908715	7.91646628054534e-08	Up	7.59836762800219e-09	NA	NA	NA	NA	NA
Solyc06g072455.1.1	519	2.46891227583256	19.48722503386	2.98058118515761	0.0053093214484399	Up	0.00143021313524614	NA	NA	NA	NA	gi|460393087|ref|XP_004242143.1|//PREDICTED: uncharacterized protein LOC101248787 [Solanum lycopersicum]
BGI_novel_G000128	475	9.79792911833022	119.408253194734	3.60728189054071	4.07374321576031e-05	Up	6.55218502162133e-06	NA	NA	NA	NA	gi|723680235|ref|XP_010317705.1|//PREDICTED: uncharacterized protein LOC104646170 [Solanum lycopersicum]
Solyc04g081510.3.1	2360	491.193667636455	3923.68873577061	2.99784673080834	1.38252818165833e-12	Up	6.27672329379696e-14	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K12812//ATP-dependent RNA helicase UAP56/SUB2 [EC:3.6.4.13];K18081//myotubularin-related protein 1/2 [EC:3.1.3.64 3.1.3.95];K19307//25S rRNA (uracil2634-N3)-methyltransferase [EC:2.1.1.313]	gi|460385344|ref|XP_004238364.1|//PREDICTED: uncharacterized protein LOC101264621 [Solanum lycopersicum]
Solyc10g081100.2.1	1475	9518.84835671368	2074.55468353494	-2.19798535285905	3.04904748605636e-06	Down	3.92780233778544e-07	NA	NA	NA	K12828//splicing factor 3B subunit 1;K19034//50S ribosomal protein 5	gi|460407798|ref|XP_004249337.1|//PREDICTED: 50S ribosomal protein 5 alpha, chloroplastic-like [Solanum lycopersicum];gi|460407796|ref|XP_004249336.1|//PREDICTED: splicing factor 3B subunit 1 [Solanum lycopersicum]
Solyc08g077290.1.1	960	336.504903184658	882.021830581228	1.39018683743481	0.00964422339560681	Up	0.00280756615177014	NA	NA	NA	K09522//DnaJ homolog subfamily C member 2	gi|460400687|ref|XP_004245864.1|//PREDICTED: dnaJ homolog subfamily C member 2 [Solanum lycopersicum]
Solyc01g098610.3.1	7882	2194.5375539007	1029.7655875149	-1.09160099406598	0.000101831696933384	Down	1.779435646428e-05	GO:0005829//cytosol;GO:0009536//plastid;GO:0009507//chloroplast	GO:0000287//magnesium ion binding;GO:0005524//ATP binding;GO:0042802//identical protein binding;GO:0004363//glutathione synthase activity;GO:0042277//peptide binding;GO:0042803//protein homodimerization activity;GO:0046872//metal ion binding;GO:0032559//adenyl ribonucleotide binding;GO:0043295//glutathione binding;GO:0016881//acid-amino acid ligase activity	GO:0006749//glutathione metabolic process;GO:0006750//glutathione biosynthetic process	K01920//glutathione synthase [EC:6.3.2.3]	gi|20138145|sp|O22494.1|GSHB_SOLLC//RecName: Full=Glutathione synthetase, chloroplastic; Short=GSH synthetase; Short=GSH-S; Short=Glutathione synthase; Flags: Precursor;gi|698566823|ref|XP_009773603.1|//PREDICTED: glutathione synthetase, chloroplastic [Nicotiana sylvestris];gi|922960061|ref|NP_001234014.2|//glutathione synthetase, chloroplastic [Solanum lycopersicum]
BGI_novel_G000168	1828	61.2102445632353	223.774368572843	1.87019975998003	3.14686927796539e-05	Up	4.96234017761959e-06	NA	NA	NA	K02184//formin 2	gi|674873424|emb|CDY60351.1|//BnaCnng36050D [Brassica napus]
Solyc04g080820.2.1	2072	3754.98598710045	1065.79701220669	-1.81687483003483	3.90757860754982e-07	Down	4.23558915713243e-08	NA	GO:0016645//oxidoreductase activity, acting on the CH-NH group of donors;GO:0050662//coenzyme binding	GO:0006725//cellular aromatic compound metabolic process	K00279//cytokinin dehydrogenase [EC:1.5.99.12]	gi|525314326|ref|NP_001266251.1|//cytokinin oxidase/dehydrogenase-like precursor [Solanum lycopersicum]
Solyc01g097910.2.1	1083	3302.70062629832	383.78258076666	-3.10528506560431	6.70328874286246e-07	Down	7.55831535975807e-08	NA	NA	NA	NA	gi|970003832|ref|XP_015062694.1|//PREDICTED: uncharacterized protein LOC107008255 [Solanum pennellii]
Solyc04g080640.1.1	804	115.482711072248	950.62032323105	3.04119236343014	1.46795748668704e-07	Up	1.47087826561189e-08	NA	NA	NA	NA	gi|460385209|ref|XP_004238297.1|//PREDICTED: uncharacterized protein LOC101245645 [Solanum lycopersicum]
Solyc02g077130.2.1	1723	52.3994559384866	10.1040396555958	-2.37461962596079	0.00210223889982236	Down	0.000504480916842715	NA	NA	NA	K21026;K01206//alpha-L-fucosidase [EC:3.2.1.51]	gi|723675023|ref|XP_010316802.1|//PREDICTED: GDSL esterase/lipase At1g28580-like isoform X3 [Solanum lycopersicum]
Solyc12g015910.1.1	1062	1378.57518115559	277.547590398737	-2.31237087431565	2.51646140918198e-08	Down	2.19491564689348e-09	NA	NA	NA	K05527//BolA protein	gi|723748868|ref|XP_010313955.1|//PREDICTED: sufE-like protein, chloroplastic [Solanum lycopersicum]
Solyc01g006690.3.1	2014	1068.96634414151	94.267803151958	-3.50330751359546	4.66059725289087e-08	Down	4.27528322624289e-09	NA	NA	NA	NA	gi|460365498|ref|XP_004228638.1|//PREDICTED: uncharacterized protein LOC101252211 [Solanum lycopersicum]
Solyc01g088560.3.1	961	700.449396703193	2779.17321297457	1.98830302042041	1.18925421919507e-05	Up	1.71242323272348e-06	NA	GO:0032561//guanyl ribonucleotide binding;GO:0003824//catalytic activity	GO:0006810//transport;GO:0035556//intracellular signal transduction	K07893//Ras-related protein Rab-6A	gi|970004031|ref|XP_015062799.1|//PREDICTED: ras-related protein RABH1b [Solanum pennellii]
Solyc07g049590.3.1	2206	389.733794794311	93.4031279921328	-2.06094626613548	3.16870829632582e-14	Down	1.15041072037474e-15	NA	NA	NA	K10520//ankyrin repeat and BTB/POZ domain-containing protein 1	gi|460395865|ref|XP_004243500.1|//PREDICTED: BTB/POZ domain-containing protein At2g04740 [Solanum lycopersicum]
Solyc08g079730.1.1	1443	77.1578314960015	1.2958394428905	-5.89585371573268	1.8957672169217e-08	Down	1.62455972554905e-09	NA	GO:0022857//transmembrane transporter activity	GO:0006810//transport	K03327//multidrug resistance protein, MATE family	gi|460400332|ref|XP_004245689.1|//PREDICTED: MATE efflux family protein DTX1-like [Solanum lycopersicum]
Solyc06g074800.1.1	981	45.3413572332793	11.8946081907327	-1.93051982681892	0.00148317951591905	Down	0.000342986645175256	NA	NA	NA	K05747//Wiskott-Aldrich syndrome protein	gi|723707499|ref|XP_010322414.1|//PREDICTED: zinc finger protein ZAT5-like [Solanum lycopersicum]
Solyc04g074630.3.1	1622	880.838741291893	351.916585843399	-1.3236444133405	9.93984726159225e-08	Down	9.67012127357826e-09	NA	NA	NA	K01875//seryl-tRNA synthetase [EC:6.1.1.11]	gi|460384484|ref|XP_004237941.1|//PREDICTED: serine--tRNA ligase, mitochondrial [Solanum lycopersicum]
Solyc09g010260.3.1	3515	179.595840099141	54.8982327929808	-1.7099223200716	8.29078677733235e-05	Down	1.42094220971277e-05	NA	NA	NA	K04427//mitogen-activated protein kinase kinase kinase 7 [EC:2.7.11.25];K16573//gamma-tubulin complex component 6	gi|697133189|ref|XP_009620645.1|//PREDICTED: protein trichome birefringence-like 8 isoform X2 [Nicotiana tomentosiformis]
Solyc10g008720.3.1	1344	402.973795399032	41.4765397345496	-3.28031858166566	9.44454816623182e-11	Down	5.67841665130905e-12	NA	GO:0016788//hydrolase activity, acting on ester bonds	NA	K21026;K01206//alpha-L-fucosidase [EC:3.2.1.51]	gi|460405356|ref|XP_004248142.1|//PREDICTED: GDSL esterase/lipase At1g28610 [Solanum lycopersicum]
Solyc12g011020.2.1	1855	321.111741118305	51.9306310576733	-2.62841775449657	2.80461204355108e-18	Down	6.19925056592288e-20	NA	NA	NA	K01094//phosphatidylglycerophosphatase GEP4 [EC:3.1.3.27]	gi|460412859|ref|XP_004251815.1|//PREDICTED: uncharacterized protein LOC101261489 [Solanum lycopersicum];gi|970068891|ref|XP_015061575.1|//PREDICTED: uncharacterized protein LOC107007464 [Solanum pennellii]
Solyc05g051060.3.1	1983	75.1846012725794	212.696625489323	1.50028802893758	0.0252022072089368	Up	0.00843017025096908	NA	NA	NA	K06236//collagen, type I, alpha;K14491//two-component response regulator ARR-B family	gi|460388775|ref|XP_004240040.1|//PREDICTED: transcription repressor KAN1-like isoform X1 [Solanum lycopersicum]
Solyc10g078265.1.1	2006	2034.96484800777	206.733837648847	-3.2991574238666	5.85642384017670e-11	Down	3.42286886141236e-12	NA	NA	NA	K09571//FK506-binding protein 4/5 [EC:5.2.1.8]	gi|723737901|ref|XP_010327743.1|//PREDICTED: 70 kDa peptidyl-prolyl isomerase-like isoform X1 [Solanum lycopersicum]
Solyc01g091910.4.1	3291	669.3199697866	3095.07890486618	2.20920822526211	1.82497142153029e-09	Up	1.34485183404107e-10	GO:0016020//membrane;GO:0044464//cell part	GO:0004620//phospholipase activity;GO:0004630//phospholipase D activity;GO:0046872//metal ion binding;GO:0008081//phosphoric diester hydrolase activity;GO:0005509//calcium ion binding;GO:0070290//N-acylphosphatidylethanolamine-specific phospholipase D activity	GO:0006650//glycerophospholipid metabolic process;GO:0016042//lipid catabolic process;GO:0046470//phosphatidylcholine metabolic process	K01115//phospholipase D1/2 [EC:3.1.4.4]	gi|350538889|ref|NP_001234108.1|//phospholipase PLDb2 [Solanum lycopersicum];gi|565344810|ref|XP_006339497.1|//PREDICTED: phospholipase D gamma 1-like [Solanum tuberosum];gi|723659633|ref|XP_010323957.1|//PREDICTED: phospholipase PLDb2 isoform X1 [Solanum lycopersicum]
Solyc04g016040.1.1	1935	530.44368605625	24.598083108694	-4.43058179918883	6.92107580710209e-10	Down	4.7881007521923e-11	NA	NA	NA	NA	gi|971574597|ref|XP_006360885.2|//PREDICTED: putative UPF0481 protein At3g02645 [Solanum tuberosum]
Solyc06g050320.3.1	1256	20.0155691042654	1608.17174710609	6.32815504272206	1.13138166510488e-42	Up	2.82550214559517e-45	NA	NA	NA	K11296//high mobility group protein B3	gi|723705928|ref|XP_010322145.1|//PREDICTED: high mobility group B protein 7 isoform X2 [Solanum lycopersicum];gi|460390523|ref|XP_004240880.1|//PREDICTED: high mobility group B protein 7 isoform X1 [Solanum lycopersicum]
Solyc03g115220.3.1	2291	2544.83267289803	173.156277285629	-3.87742420537371	3.00813233822596e-13	Down	1.24012016030934e-14	GO:0031224//intrinsic component of membrane;GO:0043231//intracellular membrane-bounded organelle;GO:0009505//plant-type cell wall;GO:0031090//organelle membrane;GO:0046658//anchored component of plasma membrane	GO:0016709//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen;GO:0001872//(1->3)-beta-D-glucan binding;GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0005506//iron ion binding	GO:0009699//phenylpropanoid biosynthetic process;GO:0052543//callose deposition in cell wall;GO:0009408//response to heat	K05280//flavonoid 3'-monooxygenase [EC:1.14.13.21];K19891//glucan endo-1,3-beta-glucosidase 1/2/3 [EC:3.2.1.39]	gi|726965361|ref|NP_001289844.1|//flavonoid 3'-monooxygenase [Solanum lycopersicum];gi|460380558|ref|XP_004236022.1|//PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 3 [Solanum lycopersicum]
Solyc09g091860.3.1	4457	297.037667185609	81.4122045352911	-1.86732889921087	6.59824386789064e-05	Down	1.11044696076958e-05	NA	NA	NA	K18060//poly(A) RNA polymerase, mitochondrial [EC:2.7.7.19];K11816//indole-3-pyruvate monooxygenase [EC:1.14.13.168];K13291//terminal uridylyltransferase [EC:2.7.7.52]	gi|723732883|ref|XP_010326827.1|//PREDICTED: uncharacterized protein LOC101245587 [Solanum lycopersicum]
Solyc03g062740.3.1	6396	118.660026784861	31.4937071014306	-1.91369852239819	0.000533300453179859	Down	0.0001104847144317	NA	NA	NA	K12621//U6 snRNA-associated Sm-like protein LSm2	gi|970013142|ref|XP_015067530.1|//PREDICTED: NAC transcription factor 56-like [Solanum pennellii]
Solyc02g086680.3.1	1766	1492.10616727877	322.958602097086	-2.2079290383362	3.96715021335838e-14	Down	1.46099016355974e-15	GO:0009536//plastid;GO:0009507//chloroplast	GO:0042586//peptide deformylase activity;GO:0005506//iron ion binding;GO:0046914//transition metal ion binding;GO:0016811//hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	GO:0031365//N-terminal protein amino acid modification;GO:0010467//gene expression;GO:0006412//translation;GO:0043686//co-translational protein modification	K01462//peptide deformylase [EC:3.5.1.88]	gi|350535262|ref|NP_001234441.1|//peptide deformylase 1B, chloroplastic [Solanum lycopersicum]
Solyc02g069370.3.1	1112	1260.97624792596	4191.3840018803	1.73288560191839	1.20891880129669e-08	Up	1.01118748699485e-09	NA	NA	NA	K07889//Ras-related protein Rab-5C	gi|565372980|ref|XP_006353063.1|//PREDICTED: ras-related protein RABF2a [Solanum tuberosum]
Solyc04g079110.1.1	963	350.241259246271	32.2621429544629	-3.44043487146435	1.52862519089647e-05	Down	2.25920638210247e-06	NA	NA	NA	K14499//BRI1 kinase inhibitor 1	gi|460385792|ref|XP_004238585.1|//PREDICTED: BRI1 kinase inhibitor 1 [Solanum lycopersicum]
Solyc04g074950.3.1	1149	465.626010894441	13306.3206539071	4.83679624227576	6.5005498737355e-21	Up	1.08552495282298e-22	NA	NA	NA	K02183//calmodulin	gi|460384541|ref|XP_004237969.1|//PREDICTED: UPF0483 protein CG5412 isoform X3 [Solanum lycopersicum]
Solyc01g005080.3.1	3103	1322.87912859585	412.756200843516	-1.68031945461349	7.18098188177145e-07	Down	8.12638325371184e-08	NA	NA	NA	K16732//protein regulator of cytokinesis 1	gi|723656155|ref|XP_010316528.1|//PREDICTED: 65-kDa microtubule-associated protein 6-like isoform X1 [Solanum lycopersicum];gi|698526110|ref|XP_009759884.1|//PREDICTED: 65-kDa microtubule-associated protein 6-like [Nicotiana sylvestris]
Solyc08g077140.1.1	813	2045.35688385543	755.845573823907	-1.43618917975546	3.036543656308e-10	Down	1.98074824755442e-11	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial;K17710//pentatricopeptide repeat domain-containing protein 1	gi|460400717|ref|XP_004245879.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g46580, chloroplastic [Solanum lycopersicum]
Solyc05g016060.3.1	694	205.01025598318	6377.33129685664	4.9591848400097	5.52074037672305e-19	Up	1.13797876410014e-20	NA	NA	NA	NA	gi|970027346|ref|XP_015074979.1|//PREDICTED: cysteine-rich and transmembrane domain-containing protein A-like [Solanum pennellii]
Solyc08g079520.3.1	3245	577.687825151214	3065.42634957365	2.40772574752145	6.70044238586962e-18	Up	1.54598696766561e-19	NA	NA	NA	K15292//syntaxin-binding protein 1	gi|460400363|ref|XP_004245704.1|//PREDICTED: SNARE-interacting protein KEULE [Solanum lycopersicum]
Solyc08g078370.3.1	1815	97.7801728674624	308.08854810529	1.6557311962301	1.90191620330913e-05	Up	2.86762003965463e-06	NA	NA	NA	K00852//ribokinase [EC:2.7.1.15];K17275//plastin-1;K01177//beta-amylase [EC:3.2.1.2]	gi|460400528|ref|XP_004245786.1|//PREDICTED: ribokinase-like isoform X2 [Solanum lycopersicum];gi|460400526|ref|XP_004245785.1|//PREDICTED: ribokinase-like isoform X1 [Solanum lycopersicum]
Solyc06g008030.3.1	2875	353.251225998308	984.656557102958	1.4789260404519	0.00935919719264432	Up	0.00271447418204732	NA	NA	NA	K16189//phytochrome-interacting factor 4	gi|723704102|ref|XP_010321805.1|//PREDICTED: transcription factor PIF1-like isoform X1 [Solanum lycopersicum]
Solyc07g063930.3.1	2186	436.029576696833	1133.22103957548	1.37793138827914	0.00297705137187512	Up	0.000745816395943518	GO:0031224//intrinsic component of membrane	NA	GO:0006810//transport	K08202//MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 4/5	gi|460397226|ref|XP_004244169.1|//PREDICTED: organic cation/carnitine transporter 4 [Solanum lycopersicum]
Solyc08g066800.3.1	2803	2588.78080819745	430.446052053354	-2.58836847695362	2.68572117640793e-11	Down	1.48861912528649e-12	GO:0016020//membrane;GO:0043231//intracellular membrane-bounded organelle	GO:0004620//phospholipase activity;GO:0046872//metal ion binding	GO:0006650//glycerophospholipid metabolic process	K01115//phospholipase D1/2 [EC:3.1.4.4]	gi|815930015|ref|NP_001289824.2|//phospholipase D alpha [Solanum lycopersicum];gi|698527881|ref|XP_009760786.1|//PREDICTED: phospholipase D alpha 1-like [Nicotiana sylvestris]
Solyc04g016530.3.1	2947	302.489696429505	98.5759467285607	-1.61757843512071	0.00049945942772392	Down	0.000102853767661409	NA	NA	NA	K01142//exodeoxyribonuclease III [EC:3.1.11.2]	gi|723688688|ref|XP_004236570.2|//PREDICTED: apurinic endonuclease-redox protein isoform X1 [Solanum lycopersicum]
Solyc03g112590.3.1	2890	38.319469994958	7.88860304114256	-2.28023585968231	0.000243539209604028	Down	4.66326569157556e-05	NA	GO:0016462//pyrophosphatase activity;GO:0032559//adenyl ribonucleotide binding	NA	K13525//transitional endoplasmic reticulum ATPase	gi|460380989|ref|XP_004236235.1|//PREDICTED: cell division cycle protein 48 homolog isoform X1 [Solanum lycopersicum]
Solyc05g050600.3.1	2352	811.994951393802	2249.80942937698	1.47026014025825	6.97680998916295e-05	Up	1.17779828689873e-05	NA	GO:0032561//guanyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity	GO:0009207//purine ribonucleoside triphosphate catabolic process	K01528//dynamin GTPase [EC:3.6.5.5]	gi|460388832|ref|XP_004240068.1|//PREDICTED: dynamin-related protein 5A [Solanum lycopersicum]
Solyc02g094570.3.1	2472	166.741449964617	48.2185978384305	-1.78995118179213	0.000187873131221314	Down	3.51054125097826e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460371837|ref|XP_004231741.1|//PREDICTED: putative serine/threonine-protein kinase [Solanum lycopersicum];gi|970010026|ref|XP_015065913.1|//PREDICTED: putative serine/threonine-protein kinase [Solanum pennellii]
Solyc01g102680.3.1	2380	13.1337180979247	77.1803074621951	2.55495739645213	0.000340457214157516	Up	6.73858583262416e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1];K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|723663547|ref|XP_010314121.1|//PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770 isoform X1 [Solanum lycopersicum];gi|723663550|ref|XP_010314124.1|//PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770 isoform X2 [Solanum lycopersicum]
Solyc11g011960.2.1	1690	7033.14396619597	3432.24464136815	-1.03501736110242	0.0219824008444481	Down	0.00718835702477595	GO:0044424//intracellular part	GO:0051748//UTP-monosaccharide-1-phosphate uridylyltransferase activity	NA	K00963//UTP--glucose-1-phosphate uridylyltransferase [EC:2.7.7.9]	gi|460409628|ref|XP_004250240.1|//PREDICTED: UTP--glucose-1-phosphate uridylyltransferase isoform X1 [Solanum lycopersicum]
Solyc05g012430.1.1	1416	25.0036084850978	388.26596119711	3.95683701076175	2.20784490752843e-06	Up	2.76433243044133e-07	NA	NA	NA	K20718	gi|723698582|ref|XP_010320875.1|//PREDICTED: LOW QUALITY PROTEIN: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Solanum lycopersicum]
Solyc06g066360.2.1	3247	6.08284552049257	86.6812250405246	3.83290127155651	1.68589663999921e-07	Up	1.71115869640593e-08	NA	NA	NA	K13172//serine/arginine repetitive matrix protein 2	gi|723709381|ref|XP_010322702.1|//PREDICTED: uncharacterized protein LOC104648061 [Solanum lycopersicum]
Solyc06g034290.3.1	1892	574.891326915912	27.3186663933116	-4.39533030285924	5.19384933935122e-14	Down	1.93598081830596e-15	NA	NA	NA	K13783//MFS transporter, OPA family, solute carrier family 37 (glycerol-3-phosphate transporter), member 1/2	gi|460390263|ref|XP_004240757.1|//PREDICTED: putative glycerol-3-phosphate transporter 1 [Solanum lycopersicum]
Solyc06g061150.3.1	1938	435.117230897084	1656.82907442202	1.9289487209508	2.25655437841596e-05	Up	3.45784070734605e-06	GO:0030119//AP-type membrane coat adaptor complex;GO:0005905//coated pit;GO:0030131//clathrin adaptor complex	NA	GO:0006886//intracellular protein transport;GO:0015031//protein transport;GO:0016192//vesicle-mediated transport	K11826//AP-2 complex subunit mu-1	gi|723710320|ref|XP_010322865.1|//PREDICTED: AP-2 complex subunit mu isoform X1 [Solanum lycopersicum];gi|460392727|ref|XP_004241965.1|//PREDICTED: AP-2 complex subunit mu isoform X2 [Solanum lycopersicum]
Solyc04g080840.2.1	2223	0.36320182206697	5.25905550457977	3.85596037794417	0.0197806086393406	Up	0.00635415555590567	NA	GO:0030246//carbohydrate binding;GO:0015925//galactosidase activity;GO:0043167//ion binding	GO:0044238//primary metabolic process	K12309//beta-galactosidase [EC:3.2.1.23]	gi|460385844|ref|XP_004238611.1|//PREDICTED: beta-galactosidase 5 [Solanum lycopersicum]
BGI_novel_G000445	5340	0.772977840143714	18.6614648562539	4.59349137133261	0.00415203065882925	Up	0.00108567523004649	NA	NA	NA	NA	gi|970034191|ref|XP_015078408.1|//PREDICTED: uncharacterized protein LOC107022255 [Solanum pennellii]
Solyc03g062660.3.1	2998	152.461989183035	18.4387759616591	-3.0476348120009	0.000209198137282178	Down	3.95502069589685e-05	GO:0016020//membrane	GO:0016301//kinase activity;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K00924	gi|460378070|ref|XP_004234802.1|//PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g06940 [Solanum lycopersicum]
Solyc06g068560.3.1	4148	200.703389591537	422.476110413757	1.07380478225639	0.000113923613513963	Up	2.01875972359243e-05	NA	NA	NA	K00924;K02882//large subunit ribosomal protein L18Ae;K01381//saccharopepsin [EC:3.4.23.25]	gi|460392134|ref|XP_004241672.1|//PREDICTED: probable folate-biopterin transporter 3 [Solanum lycopersicum];gi|460392136|ref|XP_004241673.1|//PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2-like [Solanum lycopersicum];gi|970033142|ref|XP_015077877.1|//PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2-like [Solanum pennellii]
Solyc01g105060.3.1	1502	5601.67134033994	717.248031056075	-2.96531333278747	1.10172520698223e-06	Down	1.30637077920567e-07	GO:0044424//intracellular part	GO:0016835//carbon-oxygen lyase activity	GO:0008654//phospholipid biosynthetic process;GO:0006631//fatty acid metabolic process	K08917//light-harvesting complex II chlorophyll a/b binding protein 6;K02372//3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:4.2.1.59]	gi|460369546|ref|XP_004230623.1|//PREDICTED: uncharacterized protein LOC101266461 [Solanum lycopersicum]
Solyc09g091830.3.1	1509	1052.96386734253	294.268278034359	-1.83925199684932	5.62206801129085e-12	Down	2.79762218393965e-13	GO:0009526//plastid envelope;GO:0009534//chloroplast thylakoid;GO:0000229//cytoplasmic chromosome	NA	NA	K20121	gi|460404769|ref|XP_004247853.1|//PREDICTED: uncharacterized protein LOC101263249 [Solanum lycopersicum]
Solyc09g011540.2.1	907	15.1552789880577	330.049028620332	4.44478803649569	3.11508158501299e-07	Up	3.30573925470851e-08	NA	GO:0016765//transferase activity, transferring alkyl or aryl (other than methyl) groups	GO:0009755//hormone-mediated signaling pathway	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|460401762|ref|XP_004246385.1|//PREDICTED: probable glutathione S-transferase [Solanum lycopersicum]
Solyc07g063970.3.1	2035	245.159040192691	31.5693098431467	-2.95712333527782	0.00125484055976567	Down	0.000284897638643681	GO:0044464//cell part	GO:0046914//transition metal ion binding	NA	NA	gi|460397214|ref|XP_004244163.1|//PREDICTED: uncharacterized protein LOC101261138 [Solanum lycopersicum]
Solyc06g065040.3.1	2712	434.822726154965	96.9669969902735	-2.16486163492539	8.34432063275017e-07	Down	9.61394627845191e-08	NA	NA	NA	K16189//phytochrome-interacting factor 4;K11253//histone H3;K12126//phytochrome-interacting factor 3	gi|460392477|ref|XP_004241842.1|//PREDICTED: transcription factor bHLH81-like [Solanum lycopersicum]
Solyc02g065500.3.1	8182	639.825192178568	240.52053752139	-1.41151770975162	0.000159154270063859	Down	2.93000946714403e-05	NA	NA	NA	K14861//nucleolar pre-ribosomal-associated protein 1	gi|723677174|ref|XP_010317142.1|//PREDICTED: uncharacterized protein LOC101258227 isoform X1 [Solanum lycopersicum]
Solyc11g073050.2.1	1303	827.904226949922	2182.6792064999	1.39856431999375	4.58478404663148e-09	Up	3.60760366871889e-10	GO:0005622//intracellular	GO:0005525//GTP binding	GO:0009306//protein secretion;GO:0007264//small GTPase mediated signal transduction;GO:0006904//vesicle docking involved in exocytosis	K07901//Ras-related protein Rab-8A	gi|5669640|gb|AAD46405.1|AF096249_1//ethylene-responsive small GTP-binding protein [Solanum lycopersicum];gi|909618039|ref|NP_001298123.1|//ethylene-responsive small GTP-binding protein [Solanum lycopersicum]
Solyc12g019230.2.1	1617	11.9184889341821	0.417816664405447	-4.83418749276343	0.00133670983049902	Down	0.000305577806413094	NA	GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds	GO:0044238//primary metabolic process;GO:0045229//external encapsulating structure organization	K01184//polygalacturonase [EC:3.2.1.15]	gi|460413217|ref|XP_004251991.1|//PREDICTED: polygalacturonase-like [Solanum lycopersicum]
Solyc10g008790.3.1	1843	351.413991869753	60.0014545930931	-2.55010225373296	1.94180400981054e-06	Down	2.40952197281172e-07	NA	NA	NA	K14411//RNA-binding protein Musashi	gi|460405340|ref|XP_004248134.1|//PREDICTED: protein IQ-DOMAIN 1 [Solanum lycopersicum]
Solyc05g052920.3.1	2374	1806.11717026431	812.159762253791	-1.15305603234835	0.000185568731960195	Down	3.46056495451341e-05	NA	NA	GO:0008152//metabolic process	K01930//folylpolyglutamate synthase [EC:6.3.2.17]	gi|970030249|ref|XP_015076412.1|//PREDICTED: folylpolyglutamate synthase [Solanum pennellii]
Solyc07g052120.3.1	1177	1.47307646411742	48.2789349009262	5.03448962411054	2.91400952979636e-05	Up	4.55979275610747e-06	NA	NA	NA	K15803//(-)-germacrene D synthase [EC:4.2.3.22 4.2.3.75];K14181//valencene/7-epi-alpha-selinene synthase [EC:4.2.3.73 4.2.3.86]	gi|723715802|ref|XP_010323836.1|//PREDICTED: sesquiterpene synthase-like [Solanum lycopersicum]
Solyc08g069140.3.1	3431	123.83128916298	639.328168023896	2.36818076398072	7.73044788607333e-09	Up	6.27587427160717e-10	GO:0031224//intrinsic component of membrane;GO:0005887//integral component of plasma membrane	GO:0005249//voltage-gated potassium channel activity;GO:0005267//potassium channel activity	GO:0071805//potassium ion transmembrane transport;GO:0030001//metal ion transport;GO:0042391//regulation of membrane potential	K05391//cyclic nucleotide gated channel, other eukaryote	gi|460399569|ref|XP_004245310.1|//PREDICTED: probable cyclic nucleotide-gated ion channel 14 [Solanum lycopersicum]
Solyc03g083720.1.1	630	120.004232034486	505.129562383314	2.07356819264452	5.26578060490197e-07	Up	5.82556912007942e-08	NA	NA	NA	K01051//pectinesterase [EC:3.1.1.11]	gi|460378351|ref|XP_004234936.1|//PREDICTED: 21 kDa protein-like [Solanum lycopersicum]
Solyc10g084410.2.1	2653	5.19833078038603	0.366640533496328	-3.82561024316237	0.0213781380504426	Down	0.00695737749062226	NA	NA	NA	K01102//pyruvate dehydrogenase phosphatase [EC:3.1.3.43]	gi|460408749|ref|XP_004249804.1|//PREDICTED: probable protein phosphatase 2C 38 isoform X2 [Solanum lycopersicum]
Solyc06g006100.3.1	2358	710.466831138491	2530.97732245683	1.83285537848879	3.34207216771932e-07	Up	3.57278327755293e-08	NA	NA	NA	K01657//anthranilate synthase component I [EC:4.1.3.27]	gi|460389518|ref|XP_004240399.1|//PREDICTED: anthranilate synthase alpha subunit 2, chloroplastic [Solanum lycopersicum]
Solyc03g007820.3.1	1468	303.842742580679	96.524386079997	-1.65435945448427	0.000299048276120156	Down	5.84764893591151e-05	NA	GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0043167//ion binding	GO:0044238//primary metabolic process	K01183//chitinase [EC:3.2.1.14]	gi|460376856|ref|XP_004234212.1|//PREDICTED: acidic endochitinase [Solanum lycopersicum]
Solyc07g041750.3.1	3323	739.513064235436	2317.28080165724	1.64778533726937	6.84470168911822e-06	Up	9.42460415968491e-07	GO:0005794//Golgi apparatus;GO:0016021//integral component of membrane;GO:0009507//chloroplast	NA	NA	K03469//ribonuclease HI [EC:3.1.26.4];K13506//glycerol-3-phosphate O-acyltransferase 3/4 [EC:2.3.1.15];K05605//3-hydroxyisobutyryl-CoA hydrolase [EC:3.1.2.4]	gi|460396299|ref|XP_004243713.1|//PREDICTED: uncharacterized protein At1g04910 isoform X1 [Solanum lycopersicum]
Solyc12g006130.2.1	1062	12.1846555983678	1.01413009979539	-3.58675082511554	0.021849297599962	Down	0.00713677481990707	NA	NA	NA	K17302//coatomer subunit beta';K11649//SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C;K04079//molecular chaperone HtpG;K08955//ATP-dependent metalloprotease [EC:3.4.24.-]	gi|723747219|ref|XP_004252041.2|//PREDICTED: F-box protein At3g07870-like [Solanum lycopersicum]
BGI_novel_G000467	2320	33.907088237551	116.279579306982	1.77793895327517	8.66279801043915e-05	Up	1.49309594454565e-05	NA	NA	NA	K10760//adenylate isopentenyltransferase (cytokinin synthase)	gi|970056525|ref|XP_015054869.1|//PREDICTED: uncharacterized protein LOC107001264 [Solanum pennellii]
Solyc08g060940.1.1	1056	958.101394711157	2440.37254159158	1.34885115524324	0.00788306109791947	Up	0.00223698166611231	NA	NA	NA	K15285//solute carrier family 35, member E3;K15280//solute carrier family 35, member C2	gi|460398987|ref|XP_004245028.1|//PREDICTED: probable sugar phosphate/phosphate translocator At2g25520 [Solanum lycopersicum]
Solyc09g010160.2.1	1021	15.3928634593425	64.2185124064699	2.06072761189972	0.000384471978929318	Up	7.69574521712552e-05	NA	NA	NA	K12581//CCR4-NOT transcription complex subunit 7/8	gi|723727673|ref|XP_004246880.2|//PREDICTED: NAC domain-containing protein 90-like [Solanum lycopersicum];gi|970051868|ref|XP_015087529.1|//PREDICTED: NAC domain-containing protein 90-like [Solanum pennellii]
Solyc05g007980.3.1	2250	885.527062474001	112.953298186563	-2.97081000025504	2.83063437943966e-08	Down	2.48688133008024e-09	GO:0031224//intrinsic component of membrane	GO:0015291//secondary active transmembrane transporter activity	GO:0015698//inorganic anion transport	K17471//sulfate transporter 3	gi|460386284|ref|XP_004238829.1|//PREDICTED: probable sulfate transporter 3.3 [Solanum lycopersicum]
Solyc01g108000.3.1	2308	84.4421353757034	20.7283000323954	-2.02636125895548	0.0125312700670024	Down	0.00376900321196669	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723665316|ref|XP_010315230.1|//PREDICTED: probable receptor-like protein kinase At1g49730 [Solanum lycopersicum]
Solyc06g060340.3.1	1060	58775.4632177641	964.647107851274	-5.92906892898197	2.36149564048288e-37	Down	9.06642503987389e-40	GO:0044425//membrane part;GO:0009507//chloroplast;GO:0034357//photosynthetic membrane	NA	NA	K03542//photosystem II 22kDa protein	gi|970036410|ref|XP_015079539.1|//PREDICTED: photosystem II 22 kDa protein, chloroplastic [Solanum pennellii]
Solyc12g006030.2.1	1031	363.243706050376	101.908190120598	-1.83366779823788	0.000200292258032154	Down	3.76873161825822e-05	NA	GO:0016741//transferase activity, transferring one-carbon groups;GO:0005488//binding	GO:0006730//one-carbon metabolic process	K07579//putative methylase	gi|460412289|ref|XP_004251534.1|//PREDICTED: methyltransferase-like protein 5 isoform X2 [Solanum lycopersicum]
Solyc05g050770.3.1	1700	769.860017544863	50.2325802622126	-3.93790085870355	9.44608034770851e-36	Down	4.33080320101441e-38	NA	NA	NA	K16296//serine carboxypeptidase-like clade I [EC:3.4.16.-]	gi|723702441|ref|XP_010321497.1|//PREDICTED: serine carboxypeptidase-like 12 [Solanum lycopersicum]
Solyc04g051103.1.1	1231	225.920962759233	112.455624104217	-1.00646232711591	0.0215878156389	Down	0.00703768583486727	NA	NA	NA	NA	NA
Solyc03g005110.3.1	982	182.457618940818	586.713206412266	1.68509407094988	2.80476616428862e-12	Up	1.33400985001949e-13	NA	NA	NA	K14826//FK506-binding nuclear protein [EC:5.2.1.8]	gi|460376444|ref|XP_004234008.1|//PREDICTED: uncharacterized protein LOC101252956 [Solanum lycopersicum]
Solyc08g076450.3.1	1390	3975.54784895651	1473.11350056755	-1.4322850926336	0.000381477033501141	Down	7.62868750832572e-05	NA	GO:0048037//cofactor binding	GO:0008152//metabolic process	NA	gi|460400867|ref|XP_004245953.1|//PREDICTED: uncharacterized protein At1g32220, chloroplastic [Solanum lycopersicum]
Solyc09g091880.3.1	1899	92.6817540648644	12.596828152219	-2.87922483575708	0.00378711847807419	Down	0.000980159842169534	NA	NA	NA	K12741//heterogeneous nuclear ribonucleoprotein A1/A3;K06236//collagen, type I, alpha;K14491//two-component response regulator ARR-B family;K01940//argininosuccinate synthase [EC:6.3.4.5];K12160//small ubiquitin-related modifier;K14317//nuclear pore complex protein Nup214	gi|460404771|ref|XP_004247854.1|//PREDICTED: myb family transcription factor APL-like [Solanum lycopersicum]
Solyc10g086620.2.1	1104	43.0724738759406	107.572748438199	1.32047455159111	0.00989476081276987	Up	0.00289009041780471	NA	GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K08081//tropinone reductase I [EC:1.1.1.206]	gi|460408404|ref|XP_004249635.1|//PREDICTED: tropinone reductase homolog isoform X1 [Solanum lycopersicum]
Solyc09g092580.3.1	3808	930.371050915058	9.50361201292187	-6.61318645791923	1.32810720640877e-20	Down	2.3019600826751e-22	NA	NA	NA	K20617	gi|460404867|ref|XP_004247901.1|//PREDICTED: cytochrome P450 83B1-like [Solanum lycopersicum]
Solyc03g116750.3.1	5781	1301.3020280155	3835.94722314934	1.55962702538488	3.14686927796539e-05	Up	4.9628760679408e-06	NA	NA	GO:0006355//regulation of transcription, DNA-templated	K14558//periodic tryptophan protein 2;K14963//COMPASS component SWD3	gi|971580741|ref|XP_015159310.1|//PREDICTED: topless-related protein 4 isoform X2 [Solanum tuberosum];gi|460380415|ref|XP_004235952.1|//PREDICTED: topless-related protein 4 isoform X1 [Solanum lycopersicum]
Solyc01g021675.1.1	956	1605.32457871676	798.968731620939	-1.00665407551128	0.0161371616145093	Down	0.00502316373351601	NA	NA	NA	NA	gi|460364866|ref|XP_004228333.1|//PREDICTED: uncharacterized protein LOC101251608 [Solanum lycopersicum]
Solyc05g055910.3.1	2445	507.377390376006	2381.64595377853	2.23082782677706	0.000367817376797053	Up	7.3308465548451e-05	NA	NA	NA	K03386//peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15];K18810//cyclin D1/2/4, plant;K19525//vacuolar protein sorting-associated protein 13A/C;K13217//pre-mRNA-processing factor 39;K01759//lactoylglutathione lyase [EC:4.4.1.5]	gi|460388049|ref|XP_004239684.1|//PREDICTED: uncharacterized protein LOC101256489 [Solanum lycopersicum]
Solyc00g289230.2.1	1837	100.058910909196	814.994899878116	3.02594137667162	2.7106468242695e-06	Up	3.46156106304879e-07	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|971571554|ref|XP_015169723.1|//PREDICTED: uncharacterized protein LOC102598425 [Solanum tuberosum];gi|970042319|ref|XP_015082545.1|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 [Solanum pennellii]
Solyc03g123700.3.1	3295	1272.90282408898	382.447254977393	-1.73478958719027	0.000277434175192646	Down	5.38363767725107e-05	NA	NA	NA	NA	gi|460379543|ref|XP_004235521.1|//PREDICTED: uncharacterized protein LOC101243687 isoform X2 [Solanum lycopersicum];gi|460379541|ref|XP_004235520.1|//PREDICTED: uncharacterized protein LOC101243687 isoform X1 [Solanum lycopersicum]
Solyc09g090070.1.1	1830	2113.66059125948	12972.0123773245	2.61758667103751	0.00129961811936619	Up	0.000295984296605316	GO:0031224//intrinsic component of membrane;GO:0016021//integral component of membrane	GO:0015291//secondary active transmembrane transporter activity;GO:0005315//inorganic phosphate transmembrane transporter activity	GO:0055085//transmembrane transport;GO:0006817//phosphate ion transport;GO:0015698//inorganic anion transport	K08176//MFS transporter, PHS family, inorganic phosphate transporter	gi|806776504|ref|NP_001234361.2|//phosphate transporter 1 [Solanum lycopersicum];gi|565375975|ref|XP_006354490.1|//PREDICTED: inorganic phosphate transporter isoform X1 [Solanum tuberosum]
Solyc05g056470.1.1	1845	57.957659098741	0.474899187887796	-6.93123422652272	4.58964765080102e-08	Down	4.20335629864996e-09	NA	GO:0017111//nucleoside-triphosphatase activity	NA	K05681//ATP-binding cassette, subfamily G (WHITE), member 2	gi|460387952|ref|XP_004239636.1|//PREDICTED: ABC transporter G family member 5 [Solanum lycopersicum]
Solyc02g093110.3.1	1190	3337.14113408101	7819.54448453483	1.22847186587002	0.000928122181188679	Up	0.000205046226625365	NA	GO:0016879//ligase activity, forming carbon-nitrogen bonds	GO:0006464//cellular protein modification process	K10577//ubiquitin-conjugating enzyme E2 I	gi|460372092|ref|XP_004231867.1|//PREDICTED: SUMO-conjugating enzyme SCE1 [Solanum lycopersicum]
Solyc03g005010.3.1	6086	1716.261093746	772.524682571024	-1.15161611211051	0.000134250902857892	Down	2.42200078213879e-05	NA	NA	NA	K07393//putative glutathione S-transferase	gi|460376428|ref|XP_004234000.1|//PREDICTED: uncharacterized protein LOC101250276 [Solanum lycopersicum]
Solyc02g092490.3.1	3167	234.080240367499	21.0675872911213	-3.47390614808357	2.55150947925624e-08	Down	2.22833856787586e-09	NA	GO:0016407//acetyltransferase activity	NA	NA	gi|460372189|ref|XP_004231914.1|//PREDICTED: probable N-acetyltransferase HLS1 [Solanum lycopersicum]
Solyc01g094860.3.1	6247	383.321480930822	1270.09291263076	1.72830728743692	3.50099138893855e-07	Up	3.76355269334232e-08	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K19589//release factor glutamine methyltransferase [EC:2.1.1.297];K06066//CBF1 interacting corepressor	gi|723661237|ref|XP_010326558.1|//PREDICTED: uncharacterized protein LOC101248424 isoform X3 [Solanum lycopersicum];gi|723661231|ref|XP_010326547.1|//PREDICTED: uncharacterized protein LOC101248424 isoform X1 [Solanum lycopersicum];gi|460368057|ref|XP_004229886.1|//PREDICTED: uncharacterized protein LOC101248424 isoform X4 [Solanum lycopersicum]
Solyc10g051270.2.1	1157	342.538674005569	829.396773911629	1.27579555224164	4.01656192500912e-05	Up	6.45123204669162e-06	NA	GO:0046872//metal ion binding	NA	K10666//E3 ubiquitin-protein ligase RNF5 [EC:2.3.2.27]	gi|460406541|ref|XP_004248721.1|//PREDICTED: RING finger protein 5-like isoform X1 [Solanum lycopersicum]
Solyc05g012805.1.1	2691	648.22832284506	57.8527142108876	-3.48604550593532	2.15637354745064e-16	Down	5.92383817083317e-18	NA	NA	NA	NA	gi|460386816|ref|XP_004239092.1|//PREDICTED: uncharacterized protein LOC101254997 [Solanum lycopersicum]
Solyc10g079320.2.1	1434	32.5735912695955	553.686726665527	4.08729524494552	3.68092141062567e-07	Up	3.970697242564e-08	NA	NA	NA	K13495//cis-zeatin O-glucosyltransferase [EC:2.4.1.215]	gi|460408614|ref|XP_004249738.1|//PREDICTED: zeatin O-glucosyltransferase-like [Solanum lycopersicum]
Solyc03g118130.3.1	924	9559.28652738373	827.428531089771	-3.53019633434656	5.60495027010945e-39	Down	1.83851060000608e-41	NA	NA	NA	K20093//DNA excision repair protein ERCC-6-like [EC:3.6.4.12];K00366//ferredoxin-nitrite reductase [EC:1.7.7.1]	gi|460380221|ref|XP_004235856.1|//PREDICTED: uncharacterized protein LOC101245339 [Solanum lycopersicum]
Solyc03g097390.3.1	2240	10.0103131140287	0.736847507367575	-3.76397721044422	0.00791862345478893	Down	0.00224884419643793	NA	NA	NA	K10781//fatty acyl-ACP thioesterase B [EC:3.1.2.14 3.1.2.21]	gi|460379150|ref|XP_004235327.1|//PREDICTED: palmitoyl-acyl carrier protein thioesterase, chloroplastic-like [Solanum lycopersicum]
Solyc11g045130.2.1	1338	1162.46213708797	5609.36364561983	2.27065338702507	5.41821869447352e-13	Up	2.31245728536312e-14	GO:0043231//intracellular membrane-bounded organelle	GO:0000175//3'-5'-exoribonuclease activity;GO:0005488//binding	NA	K12581//CCR4-NOT transcription complex subunit 7/8	gi|460410711|ref|XP_004250764.1|//PREDICTED: probable CCR4-associated factor 1 homolog 7 [Solanum lycopersicum]
BGI_novel_G000258	385	7.23977766861417	86.195854527169	3.57360118814723	0.000123941935772077	Up	2.21338084942606e-05	NA	NA	NA	NA	gi|970035445|ref|XP_015079056.1|//PREDICTED: uncharacterized protein LOC107023007 [Solanum pennellii]
Solyc01g110195.1.1	4725	14.1419810818429	0.756734033325842	-4.22405409396324	0.0106355541971552	Down	0.00313223176202933	NA	NA	NA	K11498//centromeric protein E;K12135//zinc finger protein CONSTANS	gi|460371201|ref|XP_004231431.1|//PREDICTED: B-box zinc finger protein 20 isoform X2 [Solanum lycopersicum];gi|723666011|ref|XP_010315328.1|//PREDICTED: kinesin-related protein 4 isoform X2 [Solanum lycopersicum]
Solyc05g024430.3.1	662	1213.94943474152	116.276118647563	-3.38408160487567	2.31987937147811e-33	Down	1.27979031973595e-35	NA	NA	NA	NA	gi|460387279|ref|XP_004239308.1|//PREDICTED: uncharacterized protein LOC101257372 [Solanum lycopersicum]
Solyc03g026270.3.1	618	21.4179062334833	800.871846630977	5.22468204744426	2.26143193806044e-11	Up	1.23658888218826e-12	GO:0043231//intracellular membrane-bounded organelle	GO:0001071//nucleic acid binding transcription factor activity;GO:0003676//nucleic acid binding	GO:0006351//transcription, DNA-templated	K09286//EREBP-like factor	gi|45826358|gb|AAS77819.1|//CBF3 [Solanum lycopersicum]
Solyc12g056940.2.1	7677	4272.5991831987	1098.929254633	-1.95901546927745	1.31818094952077e-11	Down	6.91322721028674e-13	NA	GO:0016879//ligase activity, forming carbon-nitrogen bonds;GO:0032559//adenyl ribonucleotide binding;GO:0016421//CoA carboxylase activity	GO:0006631//fatty acid metabolic process	K11262//acetyl-CoA carboxylase / biotin carboxylase 1 [EC:6.4.1.2 6.3.4.14]	gi|460414363|ref|XP_004252541.1|//PREDICTED: acetyl-CoA carboxylase 1-like [Solanum lycopersicum];gi|971573553|ref|XP_006360278.2|//PREDICTED: acetyl-CoA carboxylase 1 [Solanum tuberosum]
Solyc09g063150.3.1	984	38.8212846325398	310.950202230124	3.00176379136303	1.4511445238551e-05	Up	2.13398582641118e-06	NA	GO:0016846//carbon-sulfur lyase activity	NA	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|460403273|ref|XP_004247117.1|//PREDICTED: probable glutathione S-transferase [Solanum lycopersicum]
Solyc07g007350.1.1	768	585.827223363235	234.409724506237	-1.32144281542383	0.00478645016979018	Down	0.00127261626141022	NA	NA	NA	NA	gi|460394893|ref|XP_004243024.1|//PREDICTED: uncharacterized protein LOC101257978 [Solanum lycopersicum]
Solyc11g010490.2.1	3869	434.607398927728	160.833281347172	-1.43414676040036	0.000109597161406935	Down	1.93310633583427e-05	NA	NA	NA	NA	gi|723741591|ref|XP_010312641.1|//PREDICTED: uncharacterized protein LOC101268535 [Solanum lycopersicum];gi|697184306|ref|XP_009601182.1|//PREDICTED: uncharacterized protein LOC104096506 isoform X1 [Nicotiana tomentosiformis]
Solyc02g065380.3.1	1077	412.319877724764	1311.78627465398	1.66969676560383	6.02548687812493e-09	Up	4.82434240875665e-10	NA	NA	NA	K03251//translation initiation factor 3 subunit D;K12189//ESCRT-II complex subunit VPS25	gi|460375242|ref|XP_004233416.1|//PREDICTED: cold-regulated 413 plasma membrane protein 2 [Solanum lycopersicum]
Solyc03g119880.3.1	875	1.1164978410633	25.6792614536587	4.52355134395998	4.924946773556e-05	Up	8.03874382041215e-06	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]	gi|723685473|ref|XP_004235729.2|//PREDICTED: mavicyanin [Solanum lycopersicum]
Solyc04g078640.2.1	2132	375.706376359997	5269.9176102419	3.81010290075474	1.52197772366425e-18	Up	3.2677022842948e-20	NA	NA	GO:0006351//transcription, DNA-templated	K09286//EREBP-like factor	gi|460384883|ref|XP_004238136.1|//PREDICTED: ethylene-responsive transcription factor ERF010-like [Solanum lycopersicum]
Solyc05g005790.3.1	1828	86.7382796379387	28.9590415611371	-1.58265497389723	0.0268774817773288	Down	0.00908272140276064	NA	GO:0046872//metal ion binding	NA	K19041//E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27]	gi|460385992|ref|XP_004238684.1|//PREDICTED: RING-H2 finger protein ATL47 [Solanum lycopersicum]
Solyc10g085460.2.1	5027	1410.0413141644	610.096837433397	-1.20862727686963	0.0293603951079444	Down	0.0100377793324163	NA	NA	NA	K19613//leucine-rich repeat protein SHOC2;K15078//structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]	gi|723739666|ref|XP_010312315.1|//PREDICTED: putative disease resistance protein RGA3 isoform X2 [Solanum lycopersicum];gi|723739659|ref|XP_010312313.1|//PREDICTED: putative disease resistance protein RGA3 isoform X1 [Solanum lycopersicum]
Solyc02g090580.3.1	3385	475.953956888541	105.753321971573	-2.17011903335765	8.05638884375162e-06	Down	1.12812749887182e-06	NA	NA	NA	K20495;K10756//replication factor C subunit 3/5	gi|460372451|ref|XP_004232044.1|//PREDICTED: uncharacterized protein LOC101247483 isoform X1 [Solanum lycopersicum];gi|723670338|ref|XP_010316149.1|//PREDICTED: uncharacterized protein LOC101247483 isoform X2 [Solanum lycopersicum]
Solyc05g050830.2.1	432	105.605046745372	27.6070583295011	-1.93556970626576	0.000552760707157673	Down	0.000115278669917518	NA	NA	NA	K09286//EREBP-like factor	gi|460388814|ref|XP_004240059.1|//PREDICTED: ethylene-responsive transcription factor ERF038-like [Solanum lycopersicum]
Solyc12g055930.2.1	2613	431.19472599197	5126.95188957701	3.57168992231058	6.54207991733773e-27	Up	6.07193193460972e-29	NA	GO:0016857//racemase and epimerase activity, acting on carbohydrates and derivatives;GO:0048037//cofactor binding;GO:0003978//UDP-glucose 4-epimerase activity	GO:0006012//galactose metabolic process;GO:0019318//hexose metabolic process	K01784//UDP-glucose 4-epimerase [EC:5.1.3.2]	gi|590679306|ref|XP_007040543.1|//UDP-D-glucose/UDP-D-galactose 4-epimerase 5 isoform 1 [Theobroma cacao];gi|460414513|ref|XP_004252613.1|//PREDICTED: UDP-glucose 4-epimerase GEPI48-like [Solanum lycopersicum]
Solyc12g006720.1.1	201	51.4526722663566	0.554404393235754	-6.53616350743247	9.60235347554932e-07	Down	1.12137220213568e-07	NA	NA	NA	NA	NA
Solyc04g054710.3.1	1865	2752.96376322927	7513.78500577399	1.44855421617518	3.25267555468519e-05	Up	5.15398978044086e-06	NA	GO:0016769//transferase activity, transferring nitrogenous groups;GO:0016846//carbon-sulfur lyase activity;GO:0048037//cofactor binding	GO:0008652//cellular amino acid biosynthetic process	K15849//bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase [EC:2.6.1.1 2.6.1.78 2.6.1.79]	gi|350540010|ref|NP_001234609.1|//prephenate aminotransferase [Solanum lycopersicum]
Solyc12g013810.2.1	753	6473.96311418035	998.96761658755	-2.69613932950544	2.00340762665832e-11	Down	1.07981490537794e-12	NA	NA	NA	K03671//thioredoxin 1	gi|970068811|ref|XP_015061538.1|//PREDICTED: thioredoxin-1-like [Solanum pennellii]
Solyc08g067320.2.1	645	735.429977468297	80.8391744402409	-3.18546149105666	0.00796472113884237	Down	0.00226319553368364	NA	NA	NA	K08912//light-harvesting complex II chlorophyll a/b binding protein 1	gi|970047137|ref|XP_015085083.1|//PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like [Solanum pennellii]
Solyc07g062740.3.1	1537	211.138314858664	31.4277997844357	-2.74807522574416	8.63744432652391e-09	Down	7.06050223947627e-10	NA	NA	NA	NA	gi|460397398|ref|XP_004244254.1|//PREDICTED: uncharacterized protein LOC101262637 [Solanum lycopersicum]
Solyc02g092970.3.1	607	105.397909080476	21.2881613613327	-2.30772299052804	0.00135342580555	Down	0.000309954083394186	GO:0016020//membrane;GO:0005622//intracellular	GO:0060229//lipase activator activity;GO:0060089//molecular transducer activity;GO:0032561//guanyl ribonucleotide binding;GO:0005525//GTP binding;GO:0001071//nucleic acid binding transcription factor activity;GO:0003676//nucleic acid binding	GO:0010260//organ senescence;GO:0006355//regulation of transcription, DNA-templated;GO:0007264//small GTPase mediated signal transduction;GO:0009725//response to hormone;GO:0035556//intracellular signal transduction;GO:0010038//response to metal ion	K07937//ADP-ribosylation factor 1	gi|460372118|ref|XP_004231879.1|//PREDICTED: ADP-ribosylation factor 2-B-like [Solanum lycopersicum]
Solyc10g076845.1.1	923	1.40736260081244	12.8885827409914	3.19502764462587	0.00826998482158829	Up	0.00235726009880296	NA	NA	NA	K05278//flavonol synthase [EC:1.14.11.23]	gi|970055293|ref|XP_015089293.1|//PREDICTED: codeine O-demethylase-like [Solanum pennellii]
Solyc11g011380.2.1	1939	4093.17986899266	10419.1891255528	1.3479490336207	0.00177432465476933	Up	0.000418250675293024	GO:0044424//intracellular part	GO:0016211//ammonia ligase activity;GO:0032559//adenyl ribonucleotide binding	GO:0006541//glutamine metabolic process;GO:0071941//nitrogen cycle metabolic process	K01915//glutamine synthetase [EC:6.3.1.2]	gi|1000232033|ref|NP_001306784.1|//glutamine synthetase [Solanum lycopersicum]
Solyc05g051030.3.1	1201	425.159909480183	923.491912176929	1.11909376219675	0.00227297888841736	Up	0.000550198482979811	NA	NA	NA	K20368//protein cornichon	gi|460388781|ref|XP_004240043.1|//PREDICTED: protein cornichon homolog 4 [Solanum lycopersicum]
Solyc02g014830.3.1	1777	431.792156099962	90.0177953888683	-2.2620548982615	1.18730745228536e-13	Down	4.62035552477232e-15	NA	NA	NA	K16297//serine carboxypeptidase-like clade II [EC:3.4.16.-]	gi|460371342|ref|XP_004231499.1|//PREDICTED: serine carboxypeptidase-like 34 [Solanum lycopersicum]
Solyc08g079570.3.1	1600	234.31756560304	115.604443424492	-1.01926825882596	0.00260472819163646	Down	0.000642346865806874	NA	NA	NA	K14423//4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha-methyl oxidase [EC:1.14.13.72]	gi|460400359|ref|XP_004245702.1|//PREDICTED: methylsterol monooxygenase 1-1 [Solanum lycopersicum]
Solyc09g011990.1.1	2007	14.6195920495984	52.4650214312646	1.84345284029918	0.0200300643724499	Up	0.00644623437422591	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460401698|ref|XP_004246354.1|//PREDICTED: L-type lectin-domain containing receptor kinase IV.1-like [Solanum lycopersicum]
Solyc06g008790.3.1	4330	23.4688020332481	181.742639274636	2.95308082862319	2.32377382876663e-07	Up	2.41229689619616e-08	NA	GO:0032559//adenyl ribonucleotide binding	GO:0012501//programmed cell death;GO:0006950//response to stress	K13453;K13457//disease resistance protein RPM1	gi|460389773|ref|XP_004240523.1|//PREDICTED: putative late blight resistance protein homolog R1A-3 [Solanum lycopersicum]
Solyc09g091220.2.1	1361	43.3922927938437	5.74973000626746	-2.91587270113845	4.72606806582659e-05	Down	7.6824149526874e-06	NA	NA	NA	K01889//phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20];K11649//SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C;K04079//molecular chaperone HtpG	gi|723732740|ref|XP_004247942.2|//PREDICTED: F-box/kelch-repeat protein At3g23880-like [Solanum lycopersicum]
Solyc12g042010.1.1	384	8.22264691661797	94.6392072244282	3.5247632030426	0.000381721202760404	Up	7.63569489955557e-05	NA	NA	NA	NA	gi|970050832|ref|XP_015086956.1|//PREDICTED: transcription factor IBH1-like [Solanum pennellii]
Solyc04g015290.3.1	1603	399.234885753477	974.903049952207	1.28802096490528	1.85380625652607e-05	Up	2.78754591464162e-06	NA	NA	NA	K12741//heterogeneous nuclear ribonucleoprotein A1/A3;K06236//collagen, type I, alpha;K14491//two-component response regulator ARR-B family;K14317//nuclear pore complex protein Nup214	gi|460381815|ref|XP_004236637.1|//PREDICTED: uncharacterized protein LOC101251768 isoform X1 [Solanum lycopersicum];gi|460381817|ref|XP_004236638.1|//PREDICTED: uncharacterized protein LOC101251768 isoform X2 [Solanum lycopersicum]
Solyc11g010460.2.1	1948	49.3787497711233	12.8627402672741	-1.94069228316762	0.0370974039615902	Down	0.0131710441603603	NA	NA	NA	K18810//cyclin D1/2/4, plant	gi|460410199|ref|XP_004250518.1|//PREDICTED: cyclin-D4-1-like [Solanum lycopersicum]
Solyc07g006020.3.1	1481	194.548687543002	408.809408417128	1.07129715142555	0.015918085170049	Up	0.00494844305644136	NA	NA	NA	K07297//adiponectin receptor	gi|460394065|ref|XP_004242626.1|//PREDICTED: heptahelical transmembrane protein 2-like [Solanum lycopersicum]
Solyc07g009170.3.1	1396	396.966586676917	163.746308540945	-1.27755519525907	0.000342280286486941	Down	6.78104861591654e-05	NA	NA	NA	NA	gi|460394513|ref|XP_004242847.1|//PREDICTED: nudix hydrolase 20, chloroplastic [Solanum lycopersicum]
Solyc06g051820.3.1	1749	80.7298182815116	428.026724419532	2.40652732664135	1.48679321022851e-13	Up	5.87446251245794e-15	GO:0016459//myosin complex;GO:0015629//actin cytoskeleton	GO:0003774//motor activity;GO:0017111//nucleoside-triphosphatase activity	NA	NA	gi|970034315|ref|XP_015078475.1|//PREDICTED: myosin heavy chain IB-like [Solanum pennellii]
Solyc11g010370.1.1	1050	189.430782365037	469.437488156121	1.309262269884	0.0101139765542447	Up	0.00296181587423414	NA	NA	NA	K20043//clathrin coat assembly protein AP180;K20044//phosphatidylinositol-binding clathrin assembly protein	gi|460409401|ref|XP_004250127.1|//PREDICTED: putative clathrin assembly protein At4g40080 [Solanum lycopersicum]
Solyc11g008930.2.1	1635	9.49901916934526	1.32961328565264	-2.83677185135342	0.0194987608815363	Down	0.00624544700518269	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K03252//translation initiation factor 3 subunit C;K19995//secretory carrier-associated membrane protein	gi|723741471|ref|XP_010312628.1|//PREDICTED: uncharacterized protein LOC101258517 [Solanum lycopersicum]
Solyc07g005730.3.1	445	171.160240423475	425.670709231137	1.31439020985977	0.00172601551577574	Up	0.000405640667473016	NA	NA	NA	NA	gi|460394027|ref|XP_004242607.1|//PREDICTED: UPF0057 membrane protein At4g30660-like [Solanum lycopersicum]
Solyc08g075630.3.1	2995	59.76168664496	5.7023359803728	-3.38959591549864	3.58162221317986e-06	Down	4.66059458260433e-07	NA	GO:0000166//nucleotide binding	NA	K19613//leucine-rich repeat protein SHOC2;K15078//structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]	gi|723726422|ref|XP_010325692.1|//PREDICTED: LOW QUALITY PROTEIN: putative disease resistance protein RGA3 [Solanum lycopersicum]
Solyc01g106060.3.1	1175	604.501627269206	258.413188336148	-1.22606652202203	0.0318461368748362	Down	0.0110466732427771	NA	NA	NA	NA	gi|460369550|ref|XP_004230625.1|//PREDICTED: putative glutamine amidotransferase YLR126C [Solanum lycopersicum]
Solyc06g008160.3.1	1258	2381.08068085584	640.116127103775	-1.89521094443426	1.12456084592837e-07	Down	1.10647669921241e-08	NA	NA	NA	NA	gi|460389680|ref|XP_004240478.1|//PREDICTED: protein FLUORESCENT IN BLUE LIGHT, chloroplastic isoform X1 [Solanum lycopersicum];gi|723704151|ref|XP_010321812.1|//PREDICTED: protein FLUORESCENT IN BLUE LIGHT, chloroplastic isoform X2 [Solanum lycopersicum]
Solyc04g074680.1.1	498	184.913654609876	3248.21352667508	4.13472280661993	7.38967992105712e-08	Up	7.05418602871153e-09	NA	NA	NA	NA	gi|723694432|ref|XP_010320186.1|//PREDICTED: uncharacterized protein LOC104647148 [Solanum lycopersicum]
Solyc03g083560.1.1	1050	418.025081139649	87.1227362903012	-2.26246833430367	0.00109330500708385	Down	0.000245207105547322	NA	NA	NA	NA	gi|460378361|ref|XP_004234941.1|//PREDICTED: protein EXORDIUM-like 3 [Solanum lycopersicum]
Solyc06g068330.1.1	594	41.285633993211	118.020408793806	1.51532459569066	0.00484992683350428	Up	0.00129220504718535	NA	NA	NA	NA	gi|460392160|ref|XP_004241685.1|//PREDICTED: uncharacterized protein LOC101259944 [Solanum lycopersicum]
Solyc04g076340.3.1	2011	1451.17336954356	316.745562722294	-2.19582357239618	2.26662623185184e-05	Down	3.47580897489133e-06	NA	NA	NA	NA	gi|460384598|ref|XP_004237997.1|//PREDICTED: uncharacterized protein LOC101255390 [Solanum lycopersicum]
Solyc04g049350.3.1	1971	5807.95276078316	16168.6867234594	1.47710087862365	0.000369718586187498	Up	7.3728732522108e-05	GO:0005829//cytosol;GO:0009536//plastid;GO:0009507//chloroplast	GO:0010181//FMN binding;GO:0016838//carbon-oxygen lyase activity, acting on phosphates;GO:0004107//chorismate synthase activity	GO:0009423//chorismate biosynthetic process;GO:0008652//cellular amino acid biosynthetic process;GO:0009073//aromatic amino acid family biosynthetic process	K01736//chorismate synthase [EC:4.2.3.5]	gi|970024762|ref|XP_015073688.1|//PREDICTED: chorismate synthase 1, chloroplastic [Solanum pennellii];gi|350534912|ref|NP_001234422.1|//chorismate synthase 1, chloroplastic precursor [Solanum lycopersicum]
Solyc07g056240.3.1	1499	1405.97330259439	58.5442834817572	-4.58589708315613	2.26974798340297e-42	Down	5.92225879074877e-45	NA	NA	NA	K02541//DNA replication licensing factor MCM3 [EC:3.6.4.12];K03189//urease accessory protein	gi|460395280|ref|XP_004243212.1|//PREDICTED: uncharacterized protein LOC101250133 [Solanum lycopersicum]
Solyc03g044090.3.1	2339	998.231605657543	217.530869330047	-2.19815443747685	0.000248660782169098	Down	4.77616300327033e-05	NA	NA	NA	K10523//speckle-type POZ protein;K15095//(+)-neomenthol dehydrogenase [EC:1.1.1.208]	gi|460377754|ref|XP_004234653.1|//PREDICTED: BTB/POZ domain-containing protein NPY4 isoform X1 [Solanum lycopersicum];gi|723680705|ref|XP_010317781.1|//PREDICTED: BTB/POZ domain-containing protein NPY4 isoform X2 [Solanum lycopersicum]
Solyc04g025990.3.1	3010	4473.40237351788	2217.05979101344	-1.01272485348219	0.00104705810164149	Down	0.000233702993612243	NA	NA	NA	K03549//KUP system potassium uptake protein	gi|460383083|ref|XP_004237261.1|//PREDICTED: putative potassium transporter 12 [Solanum lycopersicum]
Solyc07g009235.1.1	491	18.7846146945607	3.39133694663947	-2.46962548835914	0.0432632778239426	Down	0.0157743128223419	NA	NA	NA	NA	NA
Solyc06g084030.3.1	1280	121.981064977738	16.5287600080808	-2.88360681433991	1.61048040646674e-09	Down	1.17778535764416e-10	NA	NA	GO:0008152//metabolic process	K17803//methyltransferase OMS1, mitochondrial [EC:2.1.1.-];K08242//24-methylenesterol C-methyltransferase [EC:2.1.1.143]	gi|460393510|ref|XP_004242352.1|//PREDICTED: methyltransferase-like protein 7B isoform X1 [Solanum lycopersicum]
Solyc11g069690.2.1	1168	245.589421550457	660.997539629073	1.42839648192391	1.19167501984473e-05	Up	1.7163531670941e-06	GO:0005623//cell	NA	GO:0045454//cell redox homeostasis	K13984//thioredoxin domain-containing protein 5	gi|460411516|ref|XP_004251156.1|//PREDICTED: protein disulfide-isomerase 5-1 [Solanum lycopersicum]
Solyc10g076190.2.1	1403	0.41622720463466	27.7700085330463	6.0600125474486	5.92220732752198e-06	Up	8.04182245943141e-07	NA	NA	NA	K00430//peroxidase [EC:1.11.1.7]	gi|460407204|ref|XP_004249044.1|//PREDICTED: peroxidase 2-like [Solanum lycopersicum]
Solyc01g080320.2.1	2007	156.152293866374	76.8210010016959	-1.02338109473212	0.00978027497475617	Down	0.00285191185058586	NA	NA	NA	NA	gi|723658901|ref|XP_010322816.1|//PREDICTED: uncharacterized protein LOC104648072 [Solanum lycopersicum]
Solyc04g014680.3.1	2063	789.820015248952	327.972857577022	-1.26794750333525	0.0215816091621119	Down	0.007034858063317	NA	NA	NA	NA	gi|460381890|ref|XP_004236674.1|//PREDICTED: uncharacterized membrane protein At1g16860-like [Solanum lycopersicum]
Solyc07g005330.3.1	1585	3525.07005486598	18637.4182691862	2.40247819180325	8.5798617641698e-11	Up	5.12335565312361e-12	NA	GO:0043167//ion binding;GO:0016798//hydrolase activity, acting on glycosyl bonds	GO:0044238//primary metabolic process	K19891//glucan endo-1,3-beta-glucosidase 1/2/3 [EC:3.2.1.39]	gi|350534796|ref|NP_001234416.1|//beta-glucosidase 08 precursor [Solanum lycopersicum]
Solyc05g053410.3.1	7713	781.917422203537	85.9794482568269	-3.18495249601092	7.90865190769154e-11	Down	4.70191583150738e-12	GO:0044464//cell part	GO:0032559//adenyl ribonucleotide binding;GO:0042802//identical protein binding;GO:0004930//G-protein coupled receptor activity;GO:0004673//protein histidine kinase activity	GO:0007602//phototransduction;GO:0006468//protein phosphorylation;GO:0006351//transcription, DNA-templated	K12121//phytochrome B	gi|723701787|ref|XP_010321412.1|//PREDICTED: phytochrome B isoform X1 [Solanum lycopersicum];gi|565378581|ref|XP_006355734.1|//PREDICTED: phytochrome B-like [Solanum tuberosum]
Solyc11g044940.1.1	2658	149.249329939651	40.1548101625729	-1.89407973018427	0.0054531115972833	Down	0.00147364913822514	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity;GO:0004871//signal transducer activity	GO:0006464//cellular protein modification process	K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|723744108|ref|XP_004250831.2|//PREDICTED: serine/threonine-protein kinase-like protein ACR4 [Solanum lycopersicum]
Solyc02g078630.2.1	1040	181.369649215853	71.6429503391345	-1.34003639689571	4.09072475556797e-05	Down	6.58254762553561e-06	NA	NA	NA	NA	gi|970005895|ref|XP_015063792.1|//PREDICTED: uncharacterized protein LOC107009049 isoform X1 [Solanum pennellii]
Solyc07g005630.3.1	541	0.512695111470444	41.5629722144066	6.34105387467895	2.25030290818633e-06	Up	2.82336349670314e-07	NA	NA	NA	NA	NA
Solyc08g023660.3.1	756	5.45171006021287	21.7660407996057	1.99729826592353	0.0273869279227052	Up	0.00927223297755819	NA	NA	GO:0006950//response to stress	NA	gi|460398654|ref|XP_004244869.1|//PREDICTED: kirola-like [Solanum lycopersicum]
Solyc10g052550.1.1	435	9.03084272497307	0.395255495920269	-4.51400319285596	0.0035862239833073	Down	0.000922087857345079	NA	NA	NA	K14488//SAUR family protein;K09494//T-complex protein 1 subunit beta	gi|460406886|ref|XP_004248889.1|//PREDICTED: uncharacterized protein LOC101259790 [Solanum lycopersicum]
Solyc12g009190.2.1	2677	204.990010762877	5.56171933076147	-5.20387885649319	5.91919744091907e-14	Down	2.22179507343279e-15	NA	GO:0016301//kinase activity	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460412619|ref|XP_004251695.1|//PREDICTED: probable inactive leucine-rich repeat receptor-like protein kinase At5g20690 [Solanum lycopersicum]
Solyc10g079480.1.1	1686	485.112700901497	96.0925705059153	-2.33582315471922	0.000307330606153839	Down	6.019913282162e-05	GO:0009536//plastid	GO:0016705//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen;GO:0016491//oxidoreductase activity	GO:0016117//carotenoid biosynthetic process;GO:0055114//oxidation-reduction process;GO:0016109//tetraterpenoid biosynthetic process	K06443//lycopene beta-cyclase [EC:5.5.1.19]	gi|861100862|gb|AKO73675.1|//lycopene beta-cyclase [Lycium chinense];gi|723738271|ref|XP_010312096.1|//PREDICTED: lycopene beta cyclase, chloroplastic [Solanum lycopersicum]
Solyc11g042940.2.1	2073	2630.49866667834	588.387629353004	-2.16049749895508	0.000145532229796467	Down	2.64722409947352e-05	NA	GO:0016773//phosphotransferase activity, alcohol group as acceptor	GO:0044238//primary metabolic process;GO:0006796//phosphate-containing compound metabolic process	NA	gi|970062851|ref|XP_015058334.1|//PREDICTED: xylulose kinase isoform X1 [Solanum pennellii];gi|460410616|ref|XP_004250720.1|//PREDICTED: uncharacterized protein LOC101268345 isoform X1 [Solanum lycopersicum]
Solyc05g005540.3.1	2095	539.298504286972	75.0584691011042	-2.84499726231595	0.0092013139307853	Down	0.00265907957750777	GO:0048046//apoplast;GO:0005618//cell wall;GO:0030312//external encapsulating structure;GO:0005576//extracellular region	NA	GO:0003006//developmental process involved in reproduction;GO:0045229//external encapsulating structure organization;GO:0071555//cell wall organization	K12741//heterogeneous nuclear ribonucleoprotein A1/A3;K06699//proteasome activator subunit 4;K12472//epidermal growth factor receptor substrate 15;K14411//RNA-binding protein Musashi	gi|822885198|ref|NP_001296190.1|//polygalacturonase non-catalytic subunit AroGP3 precursor [Solanum lycopersicum]
Solyc10g079420.1.1	618	1912.80347021004	6704.77832103786	1.80950098083049	2.71139597784225e-05	Up	4.22051200367871e-06	NA	NA	NA	K13448//calcium-binding protein CML	gi|460407618|ref|XP_004249249.1|//PREDICTED: probable calcium-binding protein CML36 [Solanum lycopersicum]
Solyc02g089020.2.1	1447	861.448060314301	4846.92938415542	2.49223534464968	1.39852615335669e-07	Up	1.39602394464337e-08	NA	NA	NA	NA	gi|350539876|ref|NP_001233792.1|//TCP transcription factor 5 [Solanum lycopersicum]
Solyc07g054780.1.1	252	9.57705158121089	99.9335886513875	3.38331618620282	0.000864692934051768	Up	0.000189421513844574	NA	NA	NA	NA	gi|460395474|ref|XP_004243308.1|//PREDICTED: uncharacterized protein LOC544070 [Solanum lycopersicum]
Solyc02g069150.3.1	1312	2490.51049761192	5671.53407782222	1.18729752656299	2.42297953376187e-07	Up	2.52431332818862e-08	GO:0031224//intrinsic component of membrane	NA	GO:0006810//transport	K08511//vesicle-associated membrane protein 72	gi|460374853|ref|XP_004233223.1|//PREDICTED: vesicle-associated membrane protein 722-like [Solanum lycopersicum]
Solyc09g007480.3.1	1008	348.895575943981	11.0325344353285	-4.98295914857713	3.8069593293628e-35	Down	1.80216130471551e-37	NA	NA	NA	NA	gi|723728418|ref|XP_010326007.1|//PREDICTED: uncharacterized protein LOC101252623 [Solanum lycopersicum]
Solyc08g075550.3.1	1380	220.540742954058	5811.6844644174	4.71983926572691	6.31806635154333e-08	Up	5.95804769550289e-09	GO:0031224//intrinsic component of membrane;GO:0016021//integral component of membrane;GO:0070469//respiratory chain;GO:0031967//organelle envelope	GO:0043169//cation binding;GO:0046872//metal ion binding;GO:0016682//oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor;GO:0009916//alternative oxidase activity	GO:0006091//generation of precursor metabolites and energy;GO:0032501//multicellular organismal process;GO:0055114//oxidation-reduction process	K17893//ubiquinol oxidase [EC:1.10.3.11]	gi|350539127|ref|NP_001234120.1|//alternative oxidase 1b [Solanum lycopersicum]
Solyc03g083060.3.1	3775	660.148916425901	89.0250700663285	-2.8905079332428	3.12748654304704e-19	Down	6.29507504564411e-21	NA	NA	NA	K10352//myosin heavy chain;K06636//structural maintenance of chromosome 1	gi|723682241|ref|XP_010318025.1|//PREDICTED: nucleoprotein TPR [Solanum lycopersicum]
Solyc10g084440.2.1	628	58.4684740764006	20.3436025106973	-1.52308376111748	0.0122867646460597	Down	0.00368126637188861	NA	NA	NA	K14682//amino-acid N-acetyltransferase [EC:2.3.1.1]	gi|460408157|ref|XP_004249513.1|//PREDICTED: dirigent protein 17-like [Solanum lycopersicum]
Solyc04g054190.3.1	3775	7900.53563642326	206.454653689103	-5.25805362395124	3.49824831609232e-24	Down	4.29000930369157e-26	GO:0016021//integral component of membrane;GO:0009941//chloroplast envelope	NA	NA	K08869//aarF domain-containing kinase;K13457//disease resistance protein RPM1	gi|698550966|ref|XP_009769152.1|//PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic [Nicotiana sylvestris];gi|460383452|ref|XP_004237437.1|//PREDICTED: uncharacterized aarF domain-containing protein kinase At1g79600, chloroplastic [Solanum lycopersicum]
Solyc10g009430.3.1	1951	46.4088535293337	92.8638731899783	1.00071739641576	0.0333415270650225	Up	0.0116449272625339	NA	NA	NA	K15406//wax-ester synthase / diacylglycerol O-acyltransferase [EC:2.3.1.75 2.3.1.20]	gi|460405234|ref|XP_004248081.1|//PREDICTED: O-acyltransferase WSD1-like [Solanum lycopersicum]
Solyc10g086565.1.1	1709	303.285913634977	79.5716464130469	-1.93035213720521	0.0171523403568028	Down	0.00538328260788279	NA	GO:0046914//transition metal ion binding;GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	GO:0008152//metabolic process	K20029//palmitoyltransferase ZDHHC3/7/25 [EC:2.3.1.225]	gi|723739970|ref|XP_010312357.1|//PREDICTED: probable protein S-acyltransferase 16 isoform X1 [Solanum lycopersicum]
Solyc03g082420.3.1	910	118.214194928656	14.5491205389711	-3.02239942863852	0.000848342710489822	Down	0.000185618447538961	GO:0009536//plastid	NA	GO:0050896//response to stimulus	K13993//HSP20 family protein	gi|407970969|ref|NP_001233900.1|//small heat shock protein, chloroplastic [Solanum lycopersicum]
BGI_novel_G000320	661	22.4981954267529	116.316324257621	2.37017239103401	6.90549951473784e-06	Up	9.52633580738211e-07	NA	NA	NA	NA	gi|971555529|ref|XP_015165457.1|//PREDICTED: uncharacterized protein LOC102584631 [Solanum tuberosum]
Solyc03g116570.3.1	1005	1552.13533958475	265.364248572804	-2.54820843928763	3.78908730007734e-07	Down	4.0944401680797e-08	GO:0009570//chloroplast stroma	NA	NA	NA	gi|460380539|ref|XP_004236013.1|//PREDICTED: DCC family protein At1g52590, chloroplastic isoform X2 [Solanum lycopersicum]
Solyc03g120550.2.1	2660	989.832663670802	5648.12846592528	2.51251634702463	1.05377548497666e-07	Up	1.03185783473747e-08	NA	NA	NA	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|723685236|ref|XP_010318544.1|//PREDICTED: protein NRT1/ PTR FAMILY 1.2-like isoform X2 [Solanum lycopersicum]
Solyc06g008990.1.1	606	17.4836402787707	0.800759488807091	-4.44849280156111	0.000661101923946335	Down	0.000140386822003961	NA	NA	NA	K13161//heterogeneous nuclear ribonucleoprotein R;K20642;K09528//DnaJ homolog subfamily C member 8	gi|460390023|ref|XP_004240642.1|//PREDICTED: protein FANTASTIC FOUR 3-like [Solanum lycopersicum]
Solyc06g072700.3.1	1548	835.471050147131	95.2113800412928	-3.13338391284288	0.000888754094702554	Down	0.000195388088957644	NA	NA	NA	K07213//copper chaperone	gi|460391678|ref|XP_004241446.1|//PREDICTED: enolase-phosphatase E1-like isoform X2 [Solanum lycopersicum]
Solyc05g041750.1.1	246	48.5382859158747	7.02491939588332	-2.78856958494496	0.000266369642981238	Down	5.15006462704518e-05	NA	NA	NA	NA	NA
Solyc12g015970.2.1	1441	844.503399586421	267.531345513637	-1.65839529479297	1.4511445238551e-05	Down	2.13441788099456e-06	NA	NA	NA	NA	gi|460413122|ref|XP_004251944.1|//PREDICTED: GPI-anchored protein LORELEI-like [Solanum lycopersicum]
Solyc01g088610.3.1	1447	5546.23204046745	1668.24812345116	-1.7331740953707	0.00574920095953795	Down	0.00156667362330094	GO:0044424//intracellular part	NA	GO:0044267//cellular protein metabolic process	K04078//chaperonin GroES	gi|460367703|ref|XP_004229710.1|//PREDICTED: 20 kDa chaperonin, chloroplastic [Solanum lycopersicum]
Solyc06g069727.1.1	3071	589.253054102772	168.319479348104	-1.80768518384016	5.59470633360757e-11	Down	3.25530661501469e-12	NA	GO:0015036//disulfide oxidoreductase activity	GO:0019725//cellular homeostasis;GO:0018904//ether metabolic process	K03671//thioredoxin 1	gi|460393148|ref|XP_004242173.1|//PREDICTED: thioredoxin-like 1-2, chloroplastic [Solanum lycopersicum]
Solyc02g085630.3.1	970	2.46137721298893	507.595579795883	7.68806992402715	4.7208640099671e-17	Up	1.20186004130294e-18	NA	GO:0003677//DNA binding	GO:0006351//transcription, DNA-templated	K09338//homeobox-leucine zipper protein	gi|460373143|ref|XP_004232382.1|//PREDICTED: homeobox-leucine zipper protein ATHB-40 [Solanum lycopersicum]
Solyc08g081890.3.1	5039	297.412384158468	110.469318831664	-1.42881898330418	0.000823386597037046	Down	0.000179267970526815	GO:0016020//membrane;GO:0016021//integral component of membrane	GO:0005524//ATP binding;GO:0000166//nucleotide binding;GO:0042626//ATPase activity, coupled to transmembrane movement of substances;GO:0016887//ATPase activity	GO:0006810//transport;GO:0055085//transmembrane transport	K05666//ATP-binding cassette, subfamily C (CFTR/MRP), member 2	gi|460400049|ref|XP_004245548.1|//PREDICTED: ABC transporter C family member 10-like [Solanum lycopersicum];gi|697097371|ref|XP_009621198.1|//PREDICTED: ABC transporter C family member 10-like [Nicotiana tomentosiformis];gi|661884194|emb|CDP12111.1|//unnamed protein product [Coffea canephora]
Solyc12g006710.2.1	2500	298.299472457761	732.426932816515	1.29592341664796	0.000152804132538144	Up	2.8005737277846e-05	NA	NA	NA	K01191//alpha-mannosidase [EC:3.2.1.24];K18404//tudor domain-containing protein 3	gi|460412382|ref|XP_004251580.1|//PREDICTED: tudor domain-containing protein 3 isoform X1 [Solanum lycopersicum];gi|460412374|ref|XP_004251576.1|//PREDICTED: uncharacterized protein LOC101266193 [Solanum lycopersicum]
Solyc04g081070.3.1	3472	1466.70986325572	451.19765165534	-1.70075204888851	1.62008131101008e-05	Down	2.40403447857877e-06	NA	NA	NA	K11498//centromeric protein E	gi|525314185|ref|NP_001265966.1|//Hop-interacting protein THI044 [Solanum lycopersicum]
Solyc06g062460.3.1	2172	1799.21851659559	40.9031148543364	-5.45901589205102	1.66365116323309e-12	Down	7.66348891122329e-14	NA	NA	NA	NA	gi|460392689|ref|XP_004241947.1|//PREDICTED: transcription factor bHLH87-like [Solanum lycopersicum]
Solyc07g064280.3.1	3723	958.01696773532	169.041799249664	-2.50267117996002	2.81309766822503e-15	Down	8.7240840165619e-17	NA	NA	NA	K01696//tryptophan synthase beta chain [EC:4.2.1.20]	gi|460397172|ref|XP_004244142.1|//PREDICTED: tryptophan synthase beta chain 1-like [Solanum lycopersicum]
Solyc04g082680.3.1	1303	1984.7333513636	964.785814537063	-1.04066459428215	0.0178294866535584	Down	0.00563767464149903	GO:0009526//plastid envelope	NA	NA	NA	gi|460385519|ref|XP_004238451.1|//PREDICTED: outer envelope pore protein 21B, chloroplastic isoform X2 [Solanum lycopersicum]
Solyc02g085490.2.1	1775	95.3373608128259	1.43979913700531	-6.0491022245706	3.1114348767909e-08	Down	2.75793653533948e-09	NA	NA	NA	K11426//SET and MYND domain-containing protein	gi|460373157|ref|XP_004232389.1|//PREDICTED: uncharacterized protein LOC101253442 [Solanum lycopersicum]
Solyc09g007850.3.1	1531	19468.1718547574	5779.28651042859	-1.75215411615664	2.44559199903752e-06	Down	3.09634763940017e-07	GO:0009532//plastid stroma;GO:0030529//intracellular ribonucleoprotein complex;GO:0009526//plastid envelope;GO:0009534//chloroplast thylakoid;GO:0009507//chloroplast	GO:0003723//RNA binding;GO:0008187//poly-pyrimidine tract binding;GO:0000166//nucleotide binding	GO:0006397//mRNA processing;GO:0006952//defense response;GO:0009725//response to hormone	K11294//nucleolin	gi|460402307|ref|XP_004246655.1|//PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic [Solanum lycopersicum]
Solyc10g007110.3.1	1700	2284.20559757996	52.5820378836846	-5.44097864440318	3.93429474636353e-49	Down	5.8659531032705e-52	NA	GO:0016769//transferase activity, transferring nitrogenous groups;GO:0016846//carbon-sulfur lyase activity;GO:0048037//cofactor binding	GO:0008652//cellular amino acid biosynthetic process	K00815//tyrosine aminotransferase [EC:2.6.1.5]	gi|460405583|ref|XP_004248255.1|//PREDICTED: probable aminotransferase TAT2 [Solanum lycopersicum]
Solyc01g068630.3.1	1961	56.5787754978953	10.5136583474113	-2.42799619478414	0.00899311590808717	Down	0.00259135772627127	NA	GO:0003824//catalytic activity	NA	K18551//pyrimidine and pyridine-specific 5'-nucleotidase [EC:3.1.3.-]	gi|460366562|ref|XP_004229150.1|//PREDICTED: uncharacterized protein C24B11.05 [Solanum lycopersicum]
Solyc08g082190.3.1	870	26504.7206839348	71894.9199852652	1.43964049798263	0.0240899147519663	Up	0.00799704714406634	NA	NA	NA	NA	gi|723724023|ref|XP_004245524.2|//PREDICTED: uncharacterized protein LOC101259182 [Solanum lycopersicum]
Solyc08g036660.3.1	613	204.05531685659	2787.58259076563	3.77198234297533	1.52457462273468e-06	Up	1.85656228286648e-07	NA	NA	NA	K13464//jasmonate ZIM domain-containing protein	gi|460398763|ref|XP_004244921.1|//PREDICTED: protein TIFY 5A-like [Solanum lycopersicum]
BGI_novel_G000470	1098	39.4543487597043	2.42811205156406	-4.02227742138945	3.98851256654258e-06	Down	5.22722908303403e-07	NA	NA	NA	NA	gi|113205388|gb|ABI34374.1|//Disease resistance protein I2C-5, putative [Solanum demissum]
Solyc05g055840.3.1	838	172.419549223212	43.5093561221463	-1.9865257866583	0.0084388047665485	Down	0.00241104214013696	NA	NA	NA	K13950//para-aminobenzoate synthetase [EC:2.6.1.85];K13691//pathogen-inducible salicylic acid glucosyltransferase [EC:2.4.1.-]	gi|460388067|ref|XP_004239693.1|//PREDICTED: UDP-glycosyltransferase 86A1-like [Solanum lycopersicum]
Solyc02g064680.3.1	4236	2457.73307830782	17865.9064882516	2.8618089702023	5.07616727001633e-18	Up	1.15522180370521e-19	GO:0043231//intracellular membrane-bounded organelle;GO:0031224//intrinsic component of membrane;GO:0031090//organelle membrane	GO:0046873//metal ion transmembrane transporter activity;GO:0016836//hydro-lyase activity;GO:0005515//protein binding;GO:0032559//adenyl ribonucleotide binding;GO:0019829//cation-transporting ATPase activity;GO:0046914//transition metal ion binding	GO:0009206//purine ribonucleoside triphosphate biosynthetic process;GO:0010035//response to inorganic substance;GO:0006816//calcium ion transport	K01537//Ca2+-transporting ATPase [EC:3.6.3.8]	gi|460375325|ref|XP_004233457.1|//PREDICTED: calcium-transporting ATPase 2, plasma membrane-type-like [Solanum lycopersicum]
Solyc12g057077.1.1	2317	305.290111067974	132.233741133982	-1.20709051269227	0.010654454090059	Down	0.00313859216765082	NA	NA	NA	NA	gi|460414340|ref|XP_004252530.1|//PREDICTED: purine permease 1-like [Solanum lycopersicum]
Solyc02g081250.2.1	7796	211.048433284447	80.4171112136691	-1.39199970258422	0.00101292388298834	Down	0.000225366880034197	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial	gi|723673702|ref|XP_010316559.1|//PREDICTED: uncharacterized protein LOC101267670 isoform X1 [Solanum lycopersicum];gi|723673690|ref|XP_010316556.1|//PREDICTED: pentatricopeptide repeat-containing protein At1g06710, mitochondrial [Solanum lycopersicum]
Solyc09g008560.3.1	1806	4.82663633365017	77.9128390254546	4.01277105020484	2.37142485889998e-05	Up	3.65242564372101e-06	NA	NA	NA	K06892//feruloyl-CoA ortho-hydroxylase [EC:1.14.11.-]	gi|460402186|ref|XP_004246595.1|//PREDICTED: feruloyl CoA ortho-hydroxylase 1 [Solanum lycopersicum]
Solyc04g077680.3.1	2751	787.598957319648	2029.68762937907	1.36572460611319	3.28411271415537e-07	Up	3.50470206524035e-08	NA	NA	NA	K14548//U3 small nucleolar RNA-associated protein 4	gi|460384768|ref|XP_004238081.1|//PREDICTED: U3 small nucleolar RNA-associated protein 4 [Solanum lycopersicum]
Solyc06g035960.3.1	5154	892.174141343013	18946.3702871189	4.40845234178403	8.30792044098705e-12	Up	4.2239464296654e-13	NA	GO:0003824//catalytic activity	NA	K07375//tubulin beta;K12261//2-hydroxyacyl-CoA lyase 1 [EC:4.1.-.-]	gi|460390213|ref|XP_004240733.1|//PREDICTED: oxalate--CoA ligase-like isoform X1 [Solanum lycopersicum]
Solyc05g052280.3.1	1260	134.625261566712	758.760485899392	2.49469540140765	0.00318058030412007	Up	0.000803443891494772	NA	GO:0016209//antioxidant activity;GO:0005506//iron ion binding;GO:0003824//catalytic activity	GO:0008152//metabolic process;GO:0006950//response to stress	K00430//peroxidase [EC:1.11.1.7]	gi|460388619|ref|XP_004239964.1|//PREDICTED: peroxidase P7-like [Solanum lycopersicum]
Solyc03g025150.3.1	4176	1216.89317090665	2463.12214073635	1.01728564790739	0.00803962794411009	Up	0.00228590584306216	NA	NA	NA	K09566//peptidyl-prolyl isomerase G (cyclophilin G) [EC:5.2.1.8]	gi|460377366|ref|XP_004234464.1|//PREDICTED: uncharacterized protein LOC101247498 isoform X1 [Solanum lycopersicum];gi|723679843|ref|XP_010317643.1|//PREDICTED: uncharacterized protein LOC101247498 isoform X2 [Solanum lycopersicum]
Solyc02g070280.3.1	2345	404.077541461095	3458.17659609701	3.09730746968508	3.2686834097462e-09	Up	2.5074364310637e-10	NA	NA	NA	K03294//basic amino acid/polyamine antiporter, APA family	gi|460374688|ref|XP_004233142.1|//PREDICTED: cationic amino acid transporter 1-like [Solanum lycopersicum]
Solyc12g005280.2.1	2928	887.888417703809	244.239841983575	-1.86207982099953	0.000267470660950406	Down	5.17334598058617e-05	GO:0005759//mitochondrial matrix;GO:0005634//nucleus	GO:0052906//tRNA (guanine(37)-N(1))-methyltransferase activity	GO:0030488//tRNA methylation	K15429//tRNA (guanine37-N1)-methyltransferase [EC:2.1.1.228]	gi|460412182|ref|XP_004251481.1|//PREDICTED: tRNA (guanine(37)-N1)-methyltransferase 1 [Solanum lycopersicum]
Solyc03g116100.3.1	1642	372.049336381512	1726.82288612963	2.21455426780284	0.000591417839300176	Up	0.000124354705214414	NA	NA	NA	K09422//myb proto-oncogene protein, plant	gi|460380535|ref|XP_004236011.1|//PREDICTED: myb-related protein 306 [Solanum lycopersicum]
Solyc02g077990.3.1	958	14023.2945610629	5099.66207463608	-1.45935177232316	0.000657650312415893	Down	0.00013960483559	GO:0030529//intracellular ribonucleoprotein complex	NA	NA	K02988//small subunit ribosomal protein S5	gi|460374193|ref|XP_004232896.1|//PREDICTED: 30S ribosomal protein S5, chloroplastic [Solanum lycopersicum]
Solyc10g079610.2.1	1757	869.189347156044	109.899088684806	-2.98349106976863	1.04887871866167e-14	Down	3.51476803368436e-16	NA	GO:0016843//amine-lyase activity	GO:0008152//metabolic process	K01757//strictosidine synthase [EC:4.3.3.2]	gi|960513897|ref|NP_001304724.1|//strictosidine synthase 1 precursor [Solanum lycopersicum]
Solyc06g061280.3.1	1464	153.454438106968	1858.51253151329	3.59826613980143	3.29253705403488e-08	Up	2.93687236108002e-09	NA	NA	NA	K09753//cinnamoyl-CoA reductase [EC:1.2.1.44]	gi|460392712|ref|XP_004241958.1|//PREDICTED: dihydroflavonol-4-reductase-like [Solanum lycopersicum]
Solyc07g021620.1.1	1401	767.660153695044	312.234041525494	-1.29783992857176	0.00438491149463144	Down	0.0011547413042184	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K11000//callose synthase [EC:2.4.1.-]	gi|460394720|ref|XP_004242943.1|//PREDICTED: pentatricopeptide repeat-containing protein At2g15690-like [Solanum lycopersicum]
Solyc10g083500.2.1	3637	572.934274904101	57.727319287957	-3.31104351047279	1.00457587639536e-08	Down	8.27910117306597e-10	NA	NA	NA	K08286//protein-serine/threonine kinase [EC:2.7.11.-]	gi|460408032|ref|XP_004249452.1|//PREDICTED: serine/threonine-protein kinase KIPK [Solanum lycopersicum]
Solyc11g006450.2.1	498	7.67004364641828	0.729783119437385	-3.39369510187201	0.0236636342522296	Down	0.00782201835950394	NA	NA	NA	K19041//E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27]	gi|697183807|ref|XP_009600924.1|//PREDICTED: RING-H2 finger protein ATL70-like [Nicotiana tomentosiformis]
Solyc08g076930.1.1	2070	4509.82767616574	9423.58706467577	1.06320401452058	0.000574217532615267	Up	0.000120288598974869	NA	NA	NA	K13422//transcription factor MYC2	gi|723725533|ref|XP_004245895.2|//PREDICTED: transcription factor MYC2 [Solanum lycopersicum]
Solyc11g013393.1.1	1351	163.336256457584	31.1193438506764	-2.39196152109868	1.04801383973835e-06	Down	1.23716260267309e-07	GO:0005739//mitochondrion	GO:0005515//protein binding	NA	K03687//molecular chaperone GrpE	gi|723742495|ref|XP_010312800.1|//PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC101255158 [Solanum lycopersicum]
Solyc02g080670.3.1	1898	191.12931138679	29.1562612719781	-2.71267140661969	0.0130929737354564	Down	0.00396283534858752	NA	GO:0016682//oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor;GO:0005507//copper ion binding;GO:0046914//transition metal ion binding;GO:0008447//L-ascorbate oxidase activity	GO:0008152//metabolic process;GO:0055114//oxidation-reduction process	K19791//iron transport multicopper oxidase	gi|460373799|ref|XP_004232701.1|//PREDICTED: L-ascorbate oxidase homolog [Solanum lycopersicum];gi|747096279|ref|XP_011096053.1|//PREDICTED: L-ascorbate oxidase homolog [Sesamum indicum]
Solyc07g009230.3.1	772	4.68616784834742	30.6933035265818	2.71144339728579	0.00406980243453522	Up	0.00106129185298973	NA	NA	NA	NA	gi|697178210|ref|XP_009598086.1|//PREDICTED: defensin Lc-def {ECO:0000303|PubMed:18468512, ECO:0000312|EMBL:ABP04037.1}-like [Nicotiana tomentosiformis]
Solyc05g005000.3.1	2126	1158.09411451918	214.478793927332	-2.43284558429513	1.01978293183828e-10	Down	6.15412467066564e-12	NA	NA	NA	K07393//putative glutathione S-transferase	gi|460385898|ref|XP_004238637.1|//PREDICTED: uncharacterized protein LOC101268569 isoform X1 [Solanum lycopersicum]
Solyc04g005670.2.1	2050	2068.10531532247	28246.1244722171	3.77167137537006	6.42412484339701e-14	Up	2.42329444666683e-15	NA	NA	NA	K06027//vesicle-fusing ATPase [EC:3.6.4.6];K10457//kelch-like protein 20;K10443//kelch-like protein 2/3	gi|460382617|ref|XP_004237034.1|//PREDICTED: F-box/kelch-repeat protein SKIP11-like [Solanum lycopersicum]
Solyc08g077840.3.1	1615	662.816924068249	210.023600206455	-1.65805898851113	1.51471650492086e-06	Down	1.84173447109433e-07	NA	NA	NA	K14977//(S)-ureidoglycine aminohydrolase [EC:3.5.3.26]	gi|460400611|ref|XP_004245827.1|//PREDICTED: (S)-ureidoglycine aminohydrolase [Solanum lycopersicum]
Solyc11g072430.2.1	3861	612.068134626732	143.39235665278	-2.09372413572357	3.88499618496135e-08	Down	3.51438902423152e-09	NA	NA	NA	NA	gi|697100877|ref|XP_009593261.1|//PREDICTED: uncharacterized protein LOC104089947 [Nicotiana tomentosiformis];gi|460411735|ref|XP_004251261.1|//PREDICTED: uncharacterized protein LOC101247886 [Solanum lycopersicum]
Solyc05g014250.3.1	1858	238.346990243578	27.3493394734319	-3.12348551235568	1.02419372709342e-07	Down	9.98691959921123e-09	NA	GO:0046872//metal ion binding	NA	K10666//E3 ubiquitin-protein ligase RNF5 [EC:2.3.2.27]	gi|460386982|ref|XP_004239171.1|//PREDICTED: E3 ubiquitin-protein ligase RNF8-A-like [Solanum lycopersicum]
Solyc12g055855.1.1	1049	568.38283076593	2046.67154616843	1.84834471380621	1.02526918186881e-06	Up	1.20840209969777e-07	GO:0031224//intrinsic component of membrane	NA	NA	NA	gi|723752071|ref|XP_010314513.1|//PREDICTED: uncharacterized protein C119.09c-like [Solanum lycopersicum]
Solyc08g044380.2.1	5802	5.45373116453746	0.465487113945802	-3.55043045059605	0.0403204268035349	Down	0.0145062158754927	NA	NA	NA	NA	gi|723721187|ref|XP_010324887.1|//PREDICTED: uncharacterized protein LOC101268299 [Solanum lycopersicum]
Solyc09g007520.3.1	1513	23.3379617119733	173.334446620634	2.89280791892281	0.00055095863434527	Up	0.000114793368841545	NA	GO:0016209//antioxidant activity;GO:0005506//iron ion binding;GO:0003824//catalytic activity	GO:0008152//metabolic process;GO:0006950//response to stress	K00430//peroxidase [EC:1.11.1.7]	gi|460402345|ref|XP_004246673.1|//PREDICTED: peroxidase 21 [Solanum lycopersicum]
Solyc07g005080.1.1	1161	0.396739106651186	8.85477811390255	4.48019363954126	0.00394567804702605	Up	0.00102495267294336	NA	NA	NA	K01183//chitinase [EC:3.2.1.14]	gi|723713936|ref|XP_004242978.2|//PREDICTED: serine/threonine-protein kinase WNK2-like [Solanum lycopersicum]
Solyc02g065490.3.1	2523	270.064893277805	66.1026445419115	-2.03052621551559	0.000413657191040154	Down	8.3570224222366e-05	NA	NA	NA	K16670//homeobox protein Meis2;K15613//homeobox protein Meis1	gi|460375230|ref|XP_004233410.1|//PREDICTED: BEL1-like homeodomain protein 2 [Solanum lycopersicum]
Solyc02g064980.1.1	1080	45.3616249301385	1608.81237614348	5.14837995384	4.42019717470206e-14	Up	1.64101550097035e-15	NA	NA	NA	K20716	gi|460375291|ref|XP_004233440.1|//PREDICTED: mitogen-activated protein kinase kinase kinase 1-like [Solanum lycopersicum]
Solyc02g091820.2.1	1989	0.390349282090715	12.7834066677754	5.03336292675002	0.000592470217090721	Up	0.000124598067870354	NA	NA	NA	K01681//aconitate hydratase [EC:4.2.1.3];K13422//transcription factor MYC2	gi|460375643|ref|XP_004233614.1|//PREDICTED: transcription factor bHLH18-like [Solanum lycopersicum]
Solyc09g090760.3.1	3710	30.3804626856994	6.39473306234143	-2.2481877993026	0.0113174754378828	Down	0.00335837266889015	NA	NA	NA	NA	gi|460404616|ref|XP_004247777.1|//PREDICTED: probable folate-biopterin transporter 8, chloroplastic [Solanum lycopersicum]
Solyc08g076300.3.1	2204	113.404932754032	37.4822245686719	-1.59720490974334	0.000605075513098452	Down	0.000127632411235431	NA	NA	NA	K01904//4-coumarate--CoA ligase [EC:6.2.1.12]	gi|460400834|ref|XP_004245937.1|//PREDICTED: 4-coumarate--CoA ligase-like 6 [Solanum lycopersicum]
Solyc03g113390.3.1	2245	666.629317427308	4424.68779407383	2.73061899056822	9.57445976279591e-07	Up	1.11753670203734e-07	NA	NA	NA	K13412//calcium-dependent protein kinase [EC:2.7.11.1]	gi|902763170|ref|NP_001265972.2|//Hop-interacting protein THI080 [Solanum lycopersicum]
Solyc05g050695.1.1	2200	206.985795284633	10.3161191242253	-4.3265595211705	2.81472312124663e-05	Down	4.38974263429846e-06	GO:0016021//integral component of membrane	GO:0004622//lysophospholipase activity;GO:0008374//O-acyltransferase activity	GO:0006629//lipid metabolic process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13418//somatic embryogenesis receptor kinase 1 [EC:2.7.10.1 2.7.11.1];K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1];K06129//lysophospholipase III [EC:3.1.1.5]	gi|460388826|ref|XP_004240065.1|//PREDICTED: lecithin-cholesterol acyltransferase-like 1 [Solanum lycopersicum];gi|460389246|ref|XP_004240268.1|//PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2 [Solanum lycopersicum]
Solyc04g012120.3.1	1225	3279.77854139593	7752.32718675823	1.24103105708013	0.00363371819905852	Up	0.000936195772770706	NA	GO:0005515//protein binding	NA	K06630//14-3-3 protein epsilon	gi|802083923|ref|NP_001234107.2|//14-3-3 family protein [Solanum lycopersicum]
Solyc12g008770.2.1	3408	492.330870713514	1167.99522711104	1.24633426971403	0.000170563015269892	Up	3.16420205381785e-05	GO:0031224//intrinsic component of membrane;GO:0019866//organelle inner membrane	NA	GO:0006810//transport	K15084//solute carrier family 25 (mitochondrial carrier protein), member 16	gi|460412550|ref|XP_004251661.1|//PREDICTED: graves disease carrier protein [Solanum lycopersicum]
Solyc07g056580.3.1	2827	366.113588916681	84.8837552352986	-2.10873093543842	1.32104854046147e-06	Down	1.58803546406301e-07	GO:0043231//intracellular membrane-bounded organelle;GO:0031224//intrinsic component of membrane;GO:0031090//organelle membrane	GO:0043169//cation binding;GO:0032559//adenyl ribonucleotide binding;GO:0004871//signal transducer activity;GO:0004673//protein histidine kinase activity	GO:0000160//phosphorelay signal transduction system;GO:0006468//protein phosphorylation;GO:0006351//transcription, DNA-templated	K14509//ethylene receptor [EC:2.7.13.-]	gi|922959896|ref|NP_001234153.2|//ethylene receptor 2 [Solanum lycopersicum]
Solyc07g042500.3.1	6469	1533.29976541829	109.982844555346	-3.80128936581777	3.3315415567027e-12	Down	1.59945785188351e-13	NA	NA	NA	K07052//uncharacterized protein	gi|723716666|ref|XP_010323979.1|//PREDICTED: uncharacterized protein LOC101258082 [Solanum lycopersicum]
Solyc02g073571.1.1	1003	4.60419623127902	0.361075356720575	-3.67257745730291	0.0297319682917084	Down	0.0101869782517289	NA	NA	NA	NA	gi|970011649|ref|XP_015066746.1|//PREDICTED: UPF0183 protein At3g51130 [Solanum pennellii]
Solyc12g016220.2.1	4158	338.037086394039	45.4165806601194	-2.89589053763491	6.75684974616218e-10	Down	4.66189387212845e-11	NA	NA	NA	K13459//disease resistance protein RPS2	gi|723748905|ref|XP_004252138.2|//PREDICTED: probable disease resistance protein At1g61300 isoform X1 [Solanum lycopersicum];gi|970065723|ref|XP_015059824.1|//PREDICTED: LOW QUALITY PROTEIN: disease resistance protein At4g27190-like [Solanum pennellii]
Solyc07g047860.3.1	4678	630.091657589468	226.098350765362	-1.4786112398611	1.28101900089588e-05	Down	1.85649391511972e-06	NA	NA	NA	K14300//nuclear pore complex protein Nup133	gi|460395965|ref|XP_004243550.1|//PREDICTED: uncharacterized protein LOC101253396 [Solanum lycopersicum]
Solyc01g110370.3.1	1370	630.557338094421	58.5434032605334	-3.42904904382125	1.55108082245099e-12	Down	7.12289985559723e-14	NA	NA	NA	K12135//zinc finger protein CONSTANS	gi|460370220|ref|XP_004230952.1|//PREDICTED: B-box zinc finger protein 19-like [Solanum lycopersicum]
Solyc11g067040.2.1	2556	73.0389218774915	17.4553242465903	-2.0649983136046	0.000933505571047156	Down	0.000206330845937438	NA	NA	GO:0044260//cellular macromolecule metabolic process;GO:0010467//gene expression;GO:0044238//primary metabolic process	NA	gi|460411967|ref|XP_004251375.1|//PREDICTED: uncharacterized protein LOC101267381 isoform X1 [Solanum lycopersicum]
Solyc05g050930.2.1	1419	158.914420072435	766.005590645581	2.26910487922144	4.03407344045143e-05	Up	6.48236566340618e-06	NA	NA	NA	K06636//structural maintenance of chromosome 1	gi|460388798|ref|XP_004240051.1|//PREDICTED: uncharacterized protein LOC101266639 [Solanum lycopersicum]
Solyc01g107430.2.1	1100	175.341612470306	84.7973115187741	-1.04807799012193	0.0200601531167248	Down	0.00645816096873239	NA	GO:0005488//binding	NA	K10773//endonuclease III [EC:4.2.99.18]	gi|723665087|ref|XP_010315203.1|//PREDICTED: zinc finger protein 4-like [Solanum lycopersicum]
Solyc11g061720.1.1	1209	117.710457414132	40.7155664606198	-1.53159011604764	0.000681055039959296	Down	0.000145004711057384	NA	NA	NA	K20714	gi|460410922|ref|XP_004250864.1|//PREDICTED: serine/threonine-protein kinase OXI1-like [Solanum lycopersicum]
Solyc11g071890.2.1	958	372.427143615053	51.0531427987174	-2.86688654436997	1.50135697731823e-12	Down	6.87776846997208e-14	GO:0016020//membrane;GO:0019867//outer membrane	NA	NA	K07277//outer membrane protein insertion porin family	gi|723746226|ref|XP_010313484.1|//PREDICTED: outer envelope protein 80, chloroplastic isoform X1 [Solanum lycopersicum];gi|661880719|emb|CDP15564.1|//unnamed protein product [Coffea canephora]
Solyc09g075590.1.1	471	295.809748524572	29.410298636118	-3.33027625906201	0.0494130249431458	Down	0.018451605929642	NA	NA	NA	NA	gi|723731226|ref|XP_010326561.1|//PREDICTED: leucine-rich repeat extensin-like protein 1 [Solanum lycopersicum]
Solyc02g031990.1.1	549	35.5672059701435	372.61603813508	3.38907022097067	2.97091628765902e-08	Up	2.62563087745622e-09	NA	NA	NA	NA	gi|970007571|ref|XP_015064669.1|//PREDICTED: uncharacterized protein LOC107009869 [Solanum pennellii]
Solyc07g042260.3.1	4619	565.470219386859	278.720912458465	-1.02062979430629	0.0275144465763703	Down	0.00932155974849522	NA	NA	NA	K14486//auxin response factor	gi|132449787|gb|ABO33637.1|//auxin response factor, partial [Solanum lycopersicum];gi|460396254|ref|XP_004243692.1|//PREDICTED: auxin response factor 7 [Solanum lycopersicum]
Solyc10g007320.3.1	1530	3328.54137135194	578.77019311298	-2.52382757047188	1.47968441218017e-07	Down	1.48531016922662e-08	NA	NA	NA	K01599//uroporphyrinogen decarboxylase [EC:4.1.1.37]	gi|723734439|ref|XP_010327114.1|//PREDICTED: uroporphyrinogen decarboxylase 1, chloroplastic [Solanum lycopersicum]
Solyc12g044300.2.1	1609	883.228256846646	373.705747950833	-1.24088357463267	0.00084147715941436	Down	0.000183771234419589	NA	NA	NA	K18660//malonyl-CoA/methylmalonyl-CoA synthetase [EC:6.2.1.-]	gi|723750987|ref|XP_010314289.1|//PREDICTED: malonate--CoA ligase [Solanum lycopersicum]
Solyc08g005960.2.1	774	564.045804699728	8.43610888051995	-6.06309079931093	9.57967214588469e-16	Down	2.8209113594934e-17	NA	NA	GO:0010876//lipid localization	K02883//large subunit ribosomal protein L18e;K11855//ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12]	gi|460397797|ref|XP_004244453.1|//PREDICTED: 14 kDa proline-rich protein DC2.15-like [Solanum lycopersicum]
Solyc03g044673.1.1	1810	28.7431750543792	1.12017805062421	-4.68141946503218	2.0854961238984e-05	Down	3.17473019606421e-06	NA	NA	NA	K00872//homoserine kinase [EC:2.7.1.39];K20098//DNA excision repair protein ERCC-6-like 2 [EC:3.6.4.-];K05658//ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:3.6.3.44]	gi|596290856|ref|XP_007226247.1|//hypothetical protein PRUPE_ppa017884mg, partial [Prunus persica];gi|723680838|ref|XP_010317807.1|//PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER-like [Solanum lycopersicum]
Solyc04g056310.3.1	1703	3.93061364610868	0.365566367014259	-3.4265493129448	0.0486446142372002	Down	0.0181030202976072	NA	NA	NA	K09422//myb proto-oncogene protein, plant	gi|460383343|ref|XP_004237385.1|//PREDICTED: myb-related protein 315-like [Solanum lycopersicum]
Solyc11g065545.1.1	1278	724.00174357974	2116.57669021376	1.54766768617013	0.000839368993013564	Up	0.000183185681157537	NA	NA	NA	NA	gi|723744891|ref|XP_010313270.1|//PREDICTED: uncharacterized protein LOC101245915 [Solanum lycopersicum]
Solyc01g103650.3.1	1962	317.344415455406	12996.4092639693	5.35591981584712	1.524148393816e-33	Up	8.35134239939437e-36	NA	NA	NA	K13696//abhydrolase domain-containing protein 1/3	gi|460369218|ref|XP_004230460.1|//PREDICTED: abhydrolase domain-containing protein 3 [Solanum lycopersicum]
Solyc05g055000.3.1	1739	2075.90216601548	884.631033645824	-1.23059069409732	0.000621826943925475	Down	0.000131467214326275	NA	GO:0016783//sulfurtransferase activity;GO:0016846//carbon-sulfur lyase activity;GO:0048037//cofactor binding	GO:0000096//sulfur amino acid metabolic process	K11717//cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]	gi|460388178|ref|XP_004239746.1|//PREDICTED: cysteine desulfurase 2, chloroplastic [Solanum lycopersicum]
BGI_novel_G000299	1127	25.6314859686497	5.78277207699311	-2.14808397459066	0.0189361458207635	Down	0.00603771400591961	NA	NA	NA	K15115//solute carrier family 25 (mitochondrial folate transporter), member 32;K20168//TBC1 domain family member 15;K11292//transcription elongation factor SPT6;K18195//rhamnogalacturonan endolyase [EC:4.2.2.23]	gi|697190238|ref|XP_009604179.1|//PREDICTED: uncharacterized protein LOC104099018 [Nicotiana tomentosiformis]
Solyc02g068260.2.1	714	33.7056861035878	7.52541075873236	-2.16314975702627	0.0275229581580849	Down	0.00932752108145623	NA	NA	NA	K00430//peroxidase [EC:1.11.1.7]	gi|723676602|ref|XP_010317057.1|//PREDICTED: vacuolar iron transporter homolog 1-like [Solanum lycopersicum]
Solyc03g007530.3.1	6879	1237.98932004707	3779.17906607559	1.61007400969398	0.00328555274240873	Up	0.000832900111865283	NA	NA	NA	K05666//ATP-binding cassette, subfamily C (CFTR/MRP), member 2	gi|460376814|ref|XP_004234191.1|//PREDICTED: ABC transporter C family member 10-like [Solanum lycopersicum];gi|697106942|ref|XP_009607298.1|//PREDICTED: ABC transporter C family member 10-like isoform X1 [Nicotiana tomentosiformis]
Solyc04g077745.1.1	2382	246.372166746699	794.605175686535	1.68939890997042	1.6472827420504e-07	Up	1.66705406465888e-08	GO:0043231//intracellular membrane-bounded organelle;GO:0019866//organelle inner membrane	GO:0016491//oxidoreductase activity	GO:0006091//generation of precursor metabolites and energy	K03937//NADH dehydrogenase (ubiquinone) Fe-S protein 4;K03549//KUP system potassium uptake protein;K12447//UDP-sugar pyrophosphorylase [EC:2.7.7.64];K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|697102004|ref|XP_009598759.1|//PREDICTED: uncharacterized protein LOC104094510 [Nicotiana tomentosiformis];gi|970066772|ref|XP_015060425.1|//PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Solanum pennellii];gi|698504029|ref|XP_009797569.1|//PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Nicotiana sylvestris];gi|970028100|ref|XP_015075346.1|//PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Solanum pennellii]
Solyc09g072930.1.1	1161	4.3596705804327	30.1393746426537	2.78935844973414	0.000124518091435763	Up	2.22691890080808e-05	NA	NA	NA	K01889//phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20];K11649//SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C;K15030//translation initiation factor 3 subunit M	gi|460404164|ref|XP_004247554.1|//PREDICTED: F-box/kelch-repeat protein At3g23880-like [Solanum lycopersicum]
Solyc12g005720.1.1	723	72.3622518518378	2517.94198443268	5.12086392816704	2.37294325552167e-17	Up	5.94385667105471e-19	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460412234|ref|XP_004251507.1|//PREDICTED: cysteine-rich repeat secretory protein 38 [Solanum lycopersicum]
Solyc03g034370.1.1	192	12.152127451263	55.4316488772472	2.18950101687504	0.0023635881341266	Up	0.000575831670070504	NA	NA	NA	NA	gi|460377596|ref|XP_004234577.1|//PREDICTED: non-specific lipid-transfer protein 2-like [Solanum lycopersicum]
Solyc07g054300.3.1	1783	604.964915114155	1567.41969015387	1.37346814463195	0.00419529590231109	Up	0.00109902115705391	NA	GO:0016791//phosphatase activity	NA	K10147//protein phosphatase 1D [EC:3.1.3.16];K19704//protein phosphatase PTC1 [EC:3.1.3.16];K17506//protein phosphatase 1L [EC:3.1.3.16];K19477//cGMP-dependent protein kinase 2 [EC:2.7.11.12]	gi|460395523|ref|XP_004243332.1|//PREDICTED: probable protein phosphatase 2C 52 [Solanum lycopersicum]
Solyc10g009420.3.1	1287	93.9371672752855	396.199663100167	2.07645965932723	6.15191095253403e-05	Up	1.0291403144093e-05	GO:0043231//intracellular membrane-bounded organelle	GO:0019787//ubiquitin-like protein transferase activity;GO:0046914//transition metal ion binding	GO:0032446//protein modification by small protein conjugation;GO:0032501//multicellular organismal process;GO:0019941//modification-dependent protein catabolic process	K04506//E3 ubiquitin-protein ligase SIAH1 [EC:2.3.2.27]	gi|460405236|ref|XP_004248082.1|//PREDICTED: E3 ubiquitin-protein ligase SINAT3-like [Solanum lycopersicum]
Solyc01g106350.3.1	2462	117.687952860164	247.235627076098	1.07092000673904	0.00346173076226524	Up	0.000883497485061507	NA	GO:0016884//carbon-nitrogen ligase activity, with glutamine as amido-N-donor	NA	K02433//aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]	gi|565392608|ref|XP_006361986.1|//PREDICTED: fatty acid amide hydrolase-like [Solanum tuberosum];gi|723664793|ref|XP_010315156.1|//PREDICTED: fatty acid amide hydrolase-like isoform X4 [Solanum lycopersicum]
Solyc06g060880.3.1	1655	880.700738382659	94.0281853450555	-3.22748669479699	2.53207603312311e-18	Down	5.568528625103e-20	NA	GO:0016709//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	GO:0008152//metabolic process	K00480//salicylate hydroxylase [EC:1.14.13.1];K09838//zeaxanthin epoxidase [EC:1.14.13.90]	gi|731438900|ref|XP_010647177.1|//PREDICTED: zeaxanthin epoxidase, chloroplastic isoform X1 [Vitis vinifera];gi|731438902|ref|XP_002265622.3|//PREDICTED: zeaxanthin epoxidase, chloroplastic isoform X2 [Vitis vinifera];gi|460392771|ref|XP_004241987.1|//PREDICTED: zeaxanthin epoxidase, chloroplastic-like [Solanum lycopersicum]
Solyc03g007150.3.1	1215	83.4373333239797	231.87693724953	1.47459438014119	0.000666948939930241	Up	0.000141752752925385	NA	NA	NA	NA	gi|460376758|ref|XP_004234164.1|//PREDICTED: uncharacterized protein LOC101247787 isoform X1 [Solanum lycopersicum]
Solyc07g032250.3.1	1411	193.884638625722	530.531028182838	1.45223862580215	0.000950950657517991	Up	0.000210656767467922	NA	NA	NA	K11426//SET and MYND domain-containing protein	gi|460395152|ref|XP_004243151.1|//PREDICTED: nucleophosmin [Solanum lycopersicum]
Solyc10g079280.2.1	4370	179.808942927485	69.5958324305269	-1.3693919544665	0.0194573589575985	Down	0.00622638387695628	NA	NA	NA	K01537//Ca2+-transporting ATPase [EC:3.6.3.8]	gi|460407606|ref|XP_004249243.1|//PREDICTED: probable sugar phosphate/phosphate translocator At5g04160 [Solanum lycopersicum]
Solyc03g120230.3.1	2444	852.367409522682	111.815104642072	-2.93036034329765	1.57384899476181e-06	Down	1.92243296400568e-07	GO:0034399//nuclear periphery	GO:0003676//nucleic acid binding	NA	K20478//golgin subfamily B member 1	gi|806638744|ref|NP_001234309.2|//MAR-binding filament-like protein 1 [Solanum lycopersicum]
Solyc02g079540.2.1	3235	16.1100549651747	91.5468087829465	2.50654817988055	0.00519287120041869	Up	0.00139255479478293	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|970008484|ref|XP_015065102.1|//PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC107010336 [Solanum pennellii]
Solyc02g065170.3.1	2560	2262.09190506736	623.589019179778	-1.85899011598142	8.64889640534891e-06	Down	1.21925325052294e-06	NA	NA	NA	K19791//iron transport multicopper oxidase	gi|460375269|ref|XP_004233429.1|//PREDICTED: L-ascorbate oxidase homolog [Solanum lycopersicum]
Solyc12g094520.2.1	2105	2924.86757266519	34224.631953788	3.54859181573678	6.30163490042286e-15	Up	2.04354493937971e-16	NA	GO:0016703//oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)	GO:0008152//metabolic process	K10526//OPC-8:0 CoA ligase 1 [EC:6.2.1.-]	gi|460415566|ref|XP_004253129.1|//PREDICTED: 4-coumarate--CoA ligase-like 5 [Solanum lycopersicum];gi|970064444|ref|XP_015059189.1|//PREDICTED: 4-coumarate--CoA ligase-like 5 [Solanum pennellii]
Solyc01g109340.3.1	1371	272.221606169565	876.391327530557	1.68679363020372	1.92362593494964e-08	Up	1.64968661178125e-09	NA	GO:0046872//metal ion binding	NA	K10666//E3 ubiquitin-protein ligase RNF5 [EC:2.3.2.27]	gi|969996900|ref|XP_015065141.1|//PREDICTED: RING finger protein 5-like isoform X1 [Solanum pennellii]
Solyc01g106560.3.1	1862	394.884031892979	969.939947976401	1.29646639823536	1.38673211884174e-05	Up	2.02572058063992e-06	NA	NA	NA	NA	gi|460369634|ref|XP_004230662.1|//PREDICTED: uncharacterized protein LOC101255635 [Solanum lycopersicum]
Solyc02g088600.3.1	2537	769.81897063762	277.459644773994	-1.47224127052031	5.16854174545149e-05	Down	8.48644192213874e-06	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial	gi|723671152|ref|XP_010316227.1|//PREDICTED: pentatricopeptide repeat-containing protein At3g29290 [Solanum lycopersicum]
Solyc06g065060.1.1	1617	5.95343110730718	169.265790991816	4.8294252520723	4.93579376432751e-13	Up	2.09184341361279e-14	NA	NA	NA	NA	gi|460393282|ref|XP_004242239.1|//PREDICTED: cannabidiolic acid synthase-like [Solanum lycopersicum]
Solyc01g010030.3.1	3898	428.956985550951	85.3014419191071	-2.33019095218382	0.000260676242249591	Down	5.02638363335744e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460365937|ref|XP_004228851.1|//PREDICTED: proline-rich receptor-like protein kinase PERK9 [Solanum lycopersicum]
Solyc06g074990.2.1	2175	9.64009432487959	424.052656783984	5.45905234971787	6.15211220949273e-15	Up	1.99047017960328e-16	NA	NA	GO:0006810//transport	K02575//MFS transporter, NNP family, nitrate/nitrite transporter	gi|6002601|gb|AAF00053.1|AF092655_1//putative high-affinity nitrate transporter [Solanum lycopersicum]
Solyc09g076020.3.1	2191	1328.52216265735	461.314533361007	-1.52599964610568	2.1327541845769e-06	Down	2.66236535118087e-07	GO:0044424//intracellular part	GO:0016836//hydro-lyase activity;GO:0004424//imidazoleglycerol-phosphate dehydratase activity	GO:0000105//histidine biosynthetic process;GO:0006547//histidine metabolic process	K01693//imidazoleglycerol-phosphate dehydratase [EC:4.2.1.19]	gi|460403763|ref|XP_004247357.1|//PREDICTED: imidazoleglycerol-phosphate dehydratase [Solanum lycopersicum]
Solyc09g066000.1.1	531	22.9859326897684	59.2810404480716	1.36681956184061	0.0209245786528275	Up	0.00678859006794152	NA	NA	NA	K20359//PRA1 family protein 1	gi|460403486|ref|XP_004247221.1|//PREDICTED: PRA1 family protein F3-like [Solanum lycopersicum]
Solyc02g079440.2.1	1644	2.92227478756188	72.1693688499053	4.6262228886308	1.6944543515843e-08	Up	1.44004619114813e-09	NA	NA	NA	K00279//cytokinin dehydrogenase [EC:1.5.99.12]	gi|460373949|ref|XP_004232774.1|//PREDICTED: cannabidiolic acid synthase-like 2 [Solanum lycopersicum]
Solyc06g009110.3.1	1664	538.439441627115	4851.61735397952	3.17160977104	1.68042916271209e-09	Up	1.23395163655241e-10	NA	NA	NA	K00924	gi|460389816|ref|XP_004240544.1|//PREDICTED: aspartic proteinase Asp1 isoform X2 [Solanum lycopersicum]
Solyc06g008820.3.1	2727	308.29252099822	127.021774744624	-1.27922405829163	0.00227020484290578	Down	0.000549357754590141	GO:0031224//intrinsic component of membrane;GO:0005774//vacuolar membrane;GO:0016021//integral component of membrane;GO:0005886//plasma membrane	GO:0005451//monovalent cation:proton antiporter activity;GO:0015385//sodium:proton antiporter activity	GO:0055067//monovalent inorganic cation homeostasis;GO:1902600//hydrogen ion transmembrane transport;GO:0035725//sodium ion transmembrane transport;GO:0055075//potassium ion homeostasis;GO:0006885//regulation of pH;GO:0009651//response to salt stress;GO:0030001//metal ion transport	K14724//solute carrier family 9 (sodium/hydrogen exchanger), member 8	gi|697190782|ref|XP_009604455.1|//PREDICTED: sodium/hydrogen exchanger 3-like isoform X3 [Nicotiana tomentosiformis];gi|697190778|ref|XP_009604452.1|//PREDICTED: sodium/hydrogen exchanger 3-like isoform X1 [Nicotiana tomentosiformis];gi|723703500|ref|XP_010321693.1|//PREDICTED: Na+/H+ antiporter, isoform 1 isoform X1 [Solanum lycopersicum]
Solyc00g006810.3.1	1282	1526.62049295318	608.464862678417	-1.32709560449945	2.56712987978252e-07	Down	2.68310428765103e-08	NA	GO:0016859//cis-trans isomerase activity	GO:0044267//cellular protein metabolic process	K01802//peptidylprolyl isomerase [EC:5.2.1.8]	gi|460415778|ref|XP_004253232.1|//PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP19, chloroplastic [Solanum lycopersicum]
Solyc02g065780.1.1	291	349.290648954684	152.999703444288	-1.19089916351634	0.00907438771709606	Down	0.00261900249991053	NA	NA	NA	NA	gi|723677112|ref|XP_010317137.1|//PREDICTED: protein RALF-like 27 [Solanum lycopersicum]
Solyc05g013060.3.1	1063	241.828843930766	814.150817227222	1.75130973996081	0.000161404331606131	Up	2.97684744590403e-05	NA	NA	NA	NA	gi|723698784|ref|XP_010320917.1|//PREDICTED: uncharacterized protein LOC104644345 [Solanum lycopersicum]
Solyc05g008350.3.1	5101	4059.41582011086	1709.02405398754	-1.24809942524065	3.39870394329904e-08	Down	3.03283779642832e-09	GO:0044464//cell part	GO:0032559//adenyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity	GO:0009207//purine ribonucleoside triphosphate catabolic process	K05681//ATP-binding cassette, subfamily G (WHITE), member 2	gi|460386348|ref|XP_004238860.1|//PREDICTED: ABC transporter G family member 7 isoform X2 [Solanum lycopersicum]
Solyc10g080940.2.1	2583	2599.98013352781	721.603028508691	-1.8492233010584	0.00349568340963664	Down	0.000894247623391094	GO:0032991//macromolecular complex;GO:0015630//microtubule cytoskeleton	GO:0032561//guanyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity	GO:0007017//microtubule-based process;GO:0009207//purine ribonucleoside triphosphate catabolic process;GO:0043623//cellular protein complex assembly	K07375//tubulin beta	gi|218196797|gb|EEC79224.1|//hypothetical protein OsI_19960 [Oryza sativa Indica Group]
Solyc02g082480.3.1	3477	681.883969124939	257.189057947861	-1.40669700314744	0.00078790993367689	Down	0.000170662912799926	NA	NA	NA	K05387//glutamate receptor, ionotropic, plant	gi|460373543|ref|XP_004232576.1|//PREDICTED: glutamate receptor 3.6 isoform X1 [Solanum lycopersicum];gi|971539199|ref|XP_015160743.1|//PREDICTED: glutamate receptor 3.6-like [Solanum tuberosum]
Solyc10g006240.3.1	1378	1266.47913750993	375.108338851194	-1.75544407166134	1.28494714013426e-07	Down	1.27690065439017e-08	NA	NA	NA	K06997//PLP dependent protein	gi|460405743|ref|XP_004248334.1|//PREDICTED: proline synthase co-transcribed bacterial homolog protein-like [Solanum lycopersicum]
Solyc09g064420.3.1	2872	367.043740300847	755.005295642372	1.04053476550794	0.0445084941982974	Up	0.0163198918081352	NA	NA	NA	K12831//splicing factor 3B subunit 4;K02184//formin 2	gi|723730236|ref|XP_010326339.1|//PREDICTED: uncharacterized protein LOC101254939 isoform X1 [Solanum lycopersicum];gi|723730239|ref|XP_010326340.1|//PREDICTED: uncharacterized protein LOC101254939 isoform X2 [Solanum lycopersicum]
Solyc03g053023.1.1	1294	563.378206073853	148.933024089552	-1.91944006555744	1.61324299481204e-05	Down	2.39268446263498e-06	NA	NA	NA	K00861//riboflavin kinase [EC:2.7.1.26]	gi|460377971|ref|XP_004234759.1|//PREDICTED: uncharacterized protein LOC101264102 isoform X1 [Solanum lycopersicum];gi|970012805|ref|XP_015067353.1|//PREDICTED: uncharacterized protein LOC107012126 [Solanum pennellii]
Solyc05g056385.1.1	2096	225.994568075055	467.849431719171	1.04975620408854	6.29239041667321e-05	Up	1.05522083213854e-05	NA	NA	NA	K09580//protein disulfide-isomerase A1 [EC:5.3.4.1];K04078//chaperonin GroES	gi|723700932|ref|XP_010321305.1|//PREDICTED: protein disulfide-isomerase-like isoform X2 [Solanum lycopersicum];gi|723700938|ref|XP_004239644.2|//PREDICTED: uncharacterized protein LOC101245255 [Solanum lycopersicum]
Solyc08g065540.3.1	999	0.395877665618988	12.2219963779841	4.94828147177808	0.000828308663686909	Up	0.000180432228663571	NA	NA	NA	K10147//protein phosphatase 1D [EC:3.1.3.16];K17506//protein phosphatase 1L [EC:3.1.3.16];K19477//cGMP-dependent protein kinase 2 [EC:2.7.11.12]	gi|460399695|ref|XP_004245372.1|//PREDICTED: probable protein phosphatase 2C 72 [Solanum lycopersicum]
Solyc08g068490.3.1	2060	641.578147020846	24.2316076755079	-4.72666297213998	1.51312812265836e-19	Down	2.95541649125161e-21	NA	NA	NA	K14487//auxin responsive GH3 gene family	gi|970039189|ref|XP_015080933.1|//PREDICTED: jasmonic acid-amido synthetase JAR1-like [Solanum pennellii];gi|460395496|ref|XP_004243319.1|//PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.5 [Solanum lycopersicum]
Solyc05g009390.3.1	1840	95.6355682442892	539.182002449199	2.49515315891414	4.42027733592082e-09	Up	3.46992100396945e-10	NA	NA	NA	K01054//acylglycerol lipase [EC:3.1.1.23]	gi|460386492|ref|XP_004238932.1|//PREDICTED: caffeoylshikimate esterase [Solanum lycopersicum]
Solyc07g042190.3.1	1328	1266.09842914687	416.868788875457	-1.60272430108729	0.0206000859943145	Down	0.00666423685495211	NA	NA	NA	NA	gi|460396259|ref|XP_004243694.1|//PREDICTED: uncharacterized protein LOC101247342 [Solanum lycopersicum]
Solyc02g085080.3.1	1962	469.732750762634	137.81246812171	-1.76913376790632	2.83052975787439e-07	Down	2.98161513931453e-08	NA	NA	NA	NA	gi|460373226|ref|XP_004232422.1|//PREDICTED: transmembrane protein 53 [Solanum lycopersicum]
Solyc06g075690.3.1	2448	617.912049503622	14418.047609252	4.54433050117009	5.32875177118723e-15	Up	1.70421537933452e-16	NA	NA	NA	NA	gi|350539181|ref|NP_001234635.1|//auxin-regulated protein [Solanum lycopersicum]
Solyc03g113490.3.1	2552	127.248915280525	446.984669599342	1.8125719933477	0.000204278679163173	Up	3.85211658672467e-05	NA	GO:0016614//oxidoreductase activity, acting on CH-OH group of donors;GO:0048037//cofactor binding	GO:0044238//primary metabolic process	NA	gi|723687588|ref|XP_010318956.1|//PREDICTED: HIPL1 protein-like [Solanum lycopersicum]
Solyc06g063370.3.1	1289	109722.989587061	6498.56879176217	-4.07760000417495	3.16628303077939e-22	Down	4.69725900644923e-24	GO:0009535//chloroplast thylakoid membrane;GO:0016021//integral component of membrane;GO:0009536//plastid;GO:0009522//photosystem I	GO:0046872//metal ion binding;GO:0016168//chlorophyll binding	GO:0009765//photosynthesis, light harvesting;GO:0006091//generation of precursor metabolites and energy;GO:0018298//protein-chromophore linkage	K08916//light-harvesting complex II chlorophyll a/b binding protein 5	gi|460392547|ref|XP_004241877.1|//PREDICTED: chlorophyll a-b binding protein CP26, chloroplastic [Solanum lycopersicum];gi|641823512|gb|KDO42913.1|//hypothetical protein CISIN_1g0225291mg [Citrus sinensis]
Solyc03g083680.1.1	315	4.64644323528332	335.064643235673	6.17216886514192	1.88666066434001e-27	Up	1.66668621383846e-29	NA	NA	NA	NA	gi|971576914|ref|XP_015158308.1|//PREDICTED: sericin-1-like [Solanum tuberosum]
Solyc07g047900.3.1	2805	484.609688968825	234.120404052509	-1.04957257574536	0.0016467021173586	Down	0.000384791097872412	NA	NA	NA	K01148//poly(A)-specific ribonuclease [EC:3.1.13.4]	gi|460396626|ref|XP_004243872.1|//PREDICTED: uncharacterized CRM domain-containing protein At3g25440, chloroplastic [Solanum lycopersicum]
Solyc05g041870.1.1	567	0.622515067689522	7.4729730375692	3.58550165459368	0.0394557278269657	Up	0.0141450334356029	NA	NA	NA	NA	gi|723702967|ref|XP_010321567.1|//PREDICTED: cytochrome b561 and DOMON domain-containing protein At5g47530-like [Solanum lycopersicum]
Solyc02g067610.1.1	324	9.28093827206776	515.676105771306	5.79605072412488	4.23423646845252e-20	Up	7.81253560415982e-22	NA	NA	NA	NA	NA
Solyc02g092760.3.1	1425	118.241939228388	543.60556266983	2.20081838342879	2.3767043237861e-06	Up	2.99790048892656e-07	NA	NA	NA	K05605//3-hydroxyisobutyryl-CoA hydrolase [EC:3.1.2.4]	gi|970008565|ref|XP_015065145.1|//PREDICTED: probable esterase KAI2 [Solanum pennellii]
BGI_novel_G000217	1015	7.81177370237523	327.388527965929	5.38920980223808	4.29823005065015e-19	Up	8.7316809959905e-21	NA	NA	NA	K11982//E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]	gi|460387765|ref|XP_004239544.1|//PREDICTED: E3 ubiquitin-protein ligase RING1-like [Solanum lycopersicum]
Solyc07g054850.3.1	1601	741.414110705246	195.543724441554	-1.9227883364122	0.000122006612808921	Down	2.1765455826133e-05	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial	gi|460395464|ref|XP_004243303.1|//PREDICTED: uncharacterized GPI-anchored protein At4g28100 [Solanum lycopersicum]
Solyc10g055730.2.1	897	19.1420600054561	3.77864150523829	-2.34080654028635	0.045784263637676	Down	0.0168630457667125	NA	NA	NA	K19747//BAHD acyltransferase [EC:2.3.1.-]	gi|970055615|ref|XP_015089453.1|//PREDICTED: uncharacterized acetyltransferase At3g50280-like [Solanum pennellii]
BGI_novel_G000342	2623	53.1857109212415	312.391710107739	2.5542455665361	0.00010298464414572	Up	1.80303739955438e-05	NA	NA	NA	K01209//alpha-N-arabinofuranosidase [EC:3.2.1.55];K05658//ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:3.6.3.44]	gi|56407681|gb|AAV88069.1|//hypothetical retrotransposon [Ipomoea batatas]
Solyc12g008990.2.1	2771	36.6186947180536	107.627451418568	1.55539382613998	0.000121418332620802	Up	2.16424059412806e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460413380|ref|XP_004252067.1|//PREDICTED: U-box domain-containing protein 34 [Solanum lycopersicum]
Solyc03g007060.3.1	2162	54.7533710154488	14.4431178355	-1.92256557985154	0.00210788864284221	Down	0.000506229555905484	NA	NA	NA	K16812//targeting protein for Xklp2	gi|723679048|ref|XP_010317465.1|//PREDICTED: protein TPX2-like isoform X1 [Solanum lycopersicum]
Solyc11g012760.2.1	2102	294.209392557551	76.9864547723886	-1.93416676383032	9.90985752107372e-10	Down	7.01092499440805e-11	NA	GO:0008168//methyltransferase activity	NA	K15445//tRNA (guanine9-N1)-methyltransferase [EC:2.1.1.221]	gi|723742288|ref|XP_004250300.2|//PREDICTED: tRNA (guanine(9)-N1)-methyltransferase [Solanum lycopersicum]
Solyc12g006420.2.1	3432	810.137944392508	1824.36557964685	1.17115537056304	0.0443242836407313	Up	0.0162374779939283	NA	NA	NA	K12617//DNA topoisomerase 2-associated protein PAT1	gi|460412336|ref|XP_004251557.1|//PREDICTED: uncharacterized protein LOC101260608 isoform X2 [Solanum lycopersicum]
Solyc09g089640.2.1	2226	186.777155041324	731.230263996604	1.9690077736588	0.00590262872787882	Up	0.00161470822401605	NA	NA	NA	K18081//myotubularin-related protein 1/2 [EC:3.1.3.64 3.1.3.95]	gi|460404465|ref|XP_004247703.1|//PREDICTED: uncharacterized protein LOC101243639 [Solanum lycopersicum]
Solyc11g044260.2.1	1046	100.249574210969	0.738927930305375	-7.08394673263471	8.40406486595276e-08	Down	8.09143415415088e-09	NA	NA	NA	NA	gi|460410833|ref|XP_004250822.1|//PREDICTED: K(+) efflux antiporter 3, chloroplastic [Solanum lycopersicum]
Solyc07g024000.3.1	2177	828.114490788152	3154.71893197261	1.92960932866142	1.27078930803875e-07	Up	1.26188411980589e-08	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K13606//chlorophyll(ide) b reductase [EC:1.1.1.294]	gi|460394746|ref|XP_004242955.1|//PREDICTED: probable chlorophyll(ide) b reductase NYC1, chloroplastic isoform X2 [Solanum lycopersicum]
Solyc01g086920.3.1	1107	2719.74853523338	124.241339375795	-4.45225607483096	3.686353029951e-08	Down	3.32112541873847e-09	NA	NA	NA	K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|460367497|ref|XP_004229610.1|//PREDICTED: DNA-damage-repair/toleration protein DRT100-like [Solanum lycopersicum]
Solyc11g066080.1.1	831	349.246851678742	96.3796082500395	-1.85744726822892	5.20562382923224e-05	Down	8.55314963443258e-06	NA	NA	NA	NA	gi|460411123|ref|XP_004250964.1|//PREDICTED: uncharacterized protein LOC101256552 [Solanum lycopersicum]
Solyc08g078550.1.1	1071	14.4982298583493	62.8241203848765	2.11544179963444	0.000147878897563241	Up	2.69542198108039e-05	NA	NA	NA	K07999//matrix metalloproteinase-20 (enamelysin) [EC:3.4.24.-]	gi|723725061|ref|XP_010325488.1|//PREDICTED: metalloendoproteinase 1 [Solanum lycopersicum]
Solyc06g053830.3.1	1096	203.427437994873	42.0977818006768	-2.27269815841115	2.04297607295443e-09	Down	1.51854713716739e-10	GO:0043231//intracellular membrane-bounded organelle	GO:0005515//protein binding	GO:0009755//hormone-mediated signaling pathway	K14484//auxin-responsive protein IAA	gi|525313255|ref|NP_001266039.1|//IAA7 protein [Solanum lycopersicum]
Solyc01g079610.3.1	1896	567.530810431829	8209.28035310117	3.85448513565894	3.69041121425653e-31	Up	2.47604748235491e-33	NA	GO:0005515//protein binding	GO:0044267//cellular protein metabolic process	K09517//DnaJ homolog subfamily B member 11	gi|460367084|ref|XP_004229405.1|//PREDICTED: dnaJ protein ERDJ3B [Solanum lycopersicum]
Solyc07g021550.3.1	2794	653.044439631047	323.065885230945	-1.01535275595077	0.00110159894429127	Down	0.00024743682862305	NA	NA	NA	NA	gi|460394718|ref|XP_004242942.1|//PREDICTED: uncharacterized protein LOC101254007 [Solanum lycopersicum]
Solyc07g056310.3.1	2711	126.819354391995	29.9857718118996	-2.08042492523549	0.00458188488014267	Down	0.00121241988833058	NA	NA	NA	K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]	gi|460395266|ref|XP_004243205.1|//PREDICTED: carbohydrate-binding X8 domain-containing protein [Solanum lycopersicum]
Solyc12g007310.2.1	1806	5014.67264074461	2136.79728415911	-1.23070547692836	0.000131117267121152	Down	2.35715886135872e-05	NA	NA	NA	K01759//lactoylglutathione lyase [EC:4.4.1.5]	gi|460412473|ref|XP_004251623.1|//PREDICTED: probable lactoylglutathione lyase, chloroplast [Solanum lycopersicum]
Solyc08g081010.3.1	2200	4046.82248718618	1637.94587625998	-1.30490188112291	2.269965994524e-07	Down	2.35136256850388e-08	GO:0009536//plastid	GO:0032559//adenyl ribonucleotide binding;GO:0016881//acid-amino acid ligase activity;GO:0004357//glutamate-cysteine ligase activity	GO:0006749//glutathione metabolic process;GO:0006750//glutathione biosynthetic process	K01919//glutamate--cysteine ligase [EC:6.3.2.2]	gi|902763309|ref|NP_001234010.2|//glutamate--cysteine ligase, chloroplastic [Solanum lycopersicum];gi|567894130|ref|XP_006439553.1|//hypothetical protein CICLE_v10019696mg [Citrus clementina]
Solyc02g065280.3.1	1191	1267.20668069175	347.019366713377	-1.86856376125913	0.000202539745563608	Down	3.81706036070375e-05	NA	NA	NA	K08233//polyneuridine-aldehyde esterase [EC:3.1.1.78]	gi|460375252|ref|XP_004233421.1|//PREDICTED: salicylic acid-binding protein 2 [Solanum lycopersicum]
Solyc04g018050.1.1	1772	0.781433939855181	77.4333274755564	6.63068691179756	1.16220990399852e-10	Up	7.06128725032645e-12	NA	NA	NA	K07466//replication factor A1	gi|971543599|ref|XP_015162463.1|//PREDICTED: replication protein A 70 kDa DNA-binding subunit D-like [Solanum tuberosum]
Solyc10g006860.3.1	3925	916.161575070362	98.2192774235415	-3.22152394162995	5.81862155272725e-19	Down	1.20154925458882e-20	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723734582|ref|XP_010327142.1|//PREDICTED: receptor-like protein kinase THESEUS 1 [Solanum lycopersicum]
Solyc11g008910.2.1	1161	542.199330858938	77.3387821441361	-2.80955938115757	3.94206826455527e-11	Down	2.23640521047157e-12	NA	NA	NA	NA	gi|460409341|ref|XP_004250097.1|//PREDICTED: uncharacterized protein LOC101256442 [Solanum lycopersicum]
Solyc08g079790.1.1	1071	493.376688367426	105.801472414776	-2.22132984587703	5.28929423417897e-07	Down	5.8574970813127e-08	GO:0031224//intrinsic component of membrane	NA	NA	K15285//solute carrier family 35, member E3;K15286	gi|460400324|ref|XP_004245685.1|//PREDICTED: probable sugar phosphate/phosphate translocator At1g12500 [Solanum lycopersicum]
Solyc04g005660.3.1	805	34.7206619816548	6.24739197800184	-2.47446849798208	0.0052445262673309	Down	0.0014098525212461	GO:0043231//intracellular membrane-bounded organelle	GO:0046983//protein dimerization activity	NA	NA	gi|460382621|ref|XP_004237036.1|//PREDICTED: transcription factor PRE6-like [Solanum lycopersicum]
Solyc03g005260.3.1	2331	4417.55390976599	1769.81728136329	-1.3196473189022	0.00161695657865533	Down	0.000377418446978517	NA	GO:0004779//sulfate adenylyltransferase activity	GO:0006790//sulfur compound metabolic process	K13811//3'-phosphoadenosine 5'-phosphosulfate synthase [EC:2.7.7.4 2.7.1.25]	gi|460376468|ref|XP_004234020.1|//PREDICTED: ATP sulfurylase 1, chloroplastic [Solanum lycopersicum]
Solyc12g007170.2.1	2470	2013.25263953896	11185.4206980864	2.4740193890373	3.70628106465871e-09	Up	2.86936997588197e-10	NA	NA	NA	K10527//enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [EC:4.2.1.17 1.1.1.35 1.1.1.211]	gi|460412453|ref|XP_004251613.1|//PREDICTED: peroxisomal fatty acid beta-oxidation multifunctional protein AIM1 [Solanum lycopersicum]
Solyc03g025710.3.1	1212	1547.54710216518	3.5393128079741	-8.77229833137275	1.43393839104487e-43	Down	3.26040859750026e-46	NA	NA	NA	NA	gi|460377231|ref|XP_004234397.1|//PREDICTED: uncharacterized protein LOC101251856 [Solanum lycopersicum]
Solyc03g120640.3.1	565	29640.9598146271	11052.6810230545	-1.42319580159154	6.93118028353924e-06	Down	9.5643467309014e-07	GO:0009522//photosystem I	NA	GO:0044237//cellular metabolic process	K02695//photosystem I subunit VI	gi|460379852|ref|XP_004235674.1|//PREDICTED: photosystem I reaction center subunit VI-1, chloroplastic [Solanum lycopersicum]
Solyc09g089580.3.1	1466	186.83243080759	662.287485379616	1.82571269410133	0.00192629177057929	Up	0.000458596449183312	NA	GO:0043169//cation binding;GO:0046872//metal ion binding;GO:0009815//1-aminocyclopropane-1-carboxylate oxidase activity;GO:0019842//vitamin binding;GO:0003824//catalytic activity;GO:0051213//dioxygenase activity;GO:0031418//L-ascorbic acid binding	GO:0009693//ethylene biosynthetic process;GO:0009835//fruit ripening;GO:0003006//developmental process involved in reproduction;GO:0009692//ethylene metabolic process;GO:0055114//oxidation-reduction process	K06892//feruloyl-CoA ortho-hydroxylase [EC:1.14.11.-];K13229//2,4-dihydroxy-1,4-benzoxazin-3-one-glucoside dioxygenase [EC:1.14.20.2]	gi|822606560|ref|NP_001296142.1|//1-aminocyclopropane-1-carboxylate oxidase homolog isoform 1 [Solanum lycopersicum]
Solyc01g096820.3.1	3369	118.49261795111	773.073061953404	2.70580758497275	0.0104395235421384	Up	0.00306593879486015	GO:0016020//membrane	GO:0046872//metal ion binding;GO:0004674//protein serine/threonine kinase activity;GO:0032559//adenyl ribonucleotide binding	GO:0006468//protein phosphorylation;GO:0051707//response to other organism	K13412//calcium-dependent protein kinase [EC:2.7.11.1]	gi|460368406|ref|XP_004230058.1|//PREDICTED: calcium and calcium/calmodulin-dependent serine/threonine-protein kinase-like [Solanum lycopersicum]
Solyc02g070020.1.1	1440	55.6494332291259	1019.643103788	4.19555346289599	4.19811475162574e-09	Up	3.27987495132233e-10	NA	GO:0016740//transferase activity	NA	K18823//soyasaponin III rhamnosyltransferase [EC:2.4.1.273]	gi|460374714|ref|XP_004233155.1|//PREDICTED: UDP-glycosyltransferase 91C1-like [Solanum lycopersicum]
Solyc01g094340.3.1	3135	1479.2194982256	597.691696773679	-1.30736274089044	3.63462462375182e-07	Down	3.91940101256673e-08	GO:0009317//acetyl-CoA carboxylase complex	GO:0003989//acetyl-CoA carboxylase activity	GO:0006633//fatty acid biosynthetic process	K01962//acetyl-CoA carboxylase carboxyl transferase subunit alpha [EC:6.4.1.2]	gi|460368055|ref|XP_004229885.1|//PREDICTED: acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic isoform X1 [Solanum lycopersicum];gi|723660991|ref|XP_010326246.1|//PREDICTED: acetyl-coenzyme A carboxylase carboxyl transferase subunit alpha, chloroplastic isoform X2 [Solanum lycopersicum]
Solyc03g111650.3.1	2677	743.74006866021	114.506643698272	-2.69936719257892	8.25687325009337e-10	Down	5.79224521271646e-11	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial	gi|460381133|ref|XP_004236307.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g50280, chloroplastic [Solanum lycopersicum]
Solyc04g071800.3.1	2596	2751.92386747946	48.5595684094401	-5.8245411487403	2.34560515847137e-23	Down	3.09506570038343e-25	NA	NA	NA	K07410//cytochrome P450, family 1, subfamily B, polypeptide 1 [EC:1.14.14.1];K20562;K05280//flavonoid 3'-monooxygenase [EC:1.14.13.21]	gi|460384239|ref|XP_004237820.1|//PREDICTED: cytochrome P450 71A1-like [Solanum lycopersicum]
Solyc09g060100.3.1	5907	1122.29551977882	235.916336922693	-2.25010538042661	5.69885466057929e-08	Down	5.31692008924629e-09	GO:0016021//integral component of membrane	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460403203|ref|XP_004247084.1|//PREDICTED: uncharacterized protein LOC101255624 [Solanum lycopersicum];gi|460403201|ref|XP_004247083.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g48740 [Solanum lycopersicum]
Solyc01g104030.3.1	2756	1308.68304639489	212.355178230564	-2.62356453524134	2.25321798484561e-08	Down	1.95355040731731e-09	GO:0031224//intrinsic component of membrane	GO:0005267//potassium channel activity	GO:0030001//metal ion transport	K05391//cyclic nucleotide gated channel, other eukaryote;K04908//potassium voltage-gated channel Eag-related subfamily H member 5	gi|460369268|ref|XP_004230485.1|//PREDICTED: potassium channel AKT2/3-like [Solanum lycopersicum]
Solyc12g005980.2.1	2323	823.752682361069	2027.70006879807	1.29956110603224	0.0352122757522619	Up	0.0123888724774713	NA	NA	NA	NA	gi|460412279|ref|XP_004251529.1|//PREDICTED: uncharacterized protein LOC101252149 [Solanum lycopersicum]
Solyc06g082490.3.1	1939	537.924459536061	1501.27382878502	1.48071164994058	5.98091598002337e-08	Up	5.60905941767511e-09	NA	GO:0016740//transferase activity	GO:0008152//metabolic process	K03843//alpha-1,3/alpha-1,6-mannosyltransferase [EC:2.4.1.132 2.4.1.257]	gi|460393773|ref|XP_004242483.1|//PREDICTED: alpha-1,3/1,6-mannosyltransferase ALG2 [Solanum lycopersicum]
Solyc11g068360.1.1	3282	115.99966466944	36.3210968174791	-1.67524096020587	0.0207144428505997	Down	0.00670818098576151	NA	NA	NA	K19613//leucine-rich repeat protein SHOC2;K15078//structure-specific endonuclease subunit SLX1 [EC:3.6.1.-];K12818//ATP-dependent RNA helicase DHX8/PRP22 [EC:3.6.4.13]	gi|565346368|ref|XP_006340234.1|//PREDICTED: putative disease resistance RPP13-like protein 1 isoform X2 [Solanum tuberosum]
Solyc03g113340.3.1	2219	300.870136706274	86.3282859319739	-1.80123566818163	7.33985228794665e-07	Down	8.32805664399494e-08	NA	NA	NA	K14794//ribosomal RNA-processing protein 12	gi|460380884|ref|XP_004236183.1|//PREDICTED: uncharacterized protein LOC101243876 [Solanum lycopersicum]
Solyc07g056480.3.1	951	1723.31571863938	9528.63017947462	2.4670817959906	4.91457796834102e-12	Up	2.42175043765723e-13	NA	GO:0016765//transferase activity, transferring alkyl or aryl (other than methyl) groups	GO:0009755//hormone-mediated signaling pathway	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|908212425|ref|NP_001234379.2|//glutathione S-transferase/peroxidase [Solanum lycopersicum]
Solyc10g086500.1.1	774	3547.86615283614	925.743536438764	-1.93826710678695	0.00779951742721987	Down	0.00220949502187532	GO:0031224//intrinsic component of membrane;GO:0044424//intracellular part	GO:0033765//steroid dehydrogenase activity, acting on the CH-CH group of donors	GO:0006629//lipid metabolic process	K09591//steroid 5-alpha-reductase [EC:1.3.1.22]	gi|350537499|ref|NP_001234040.1|//steroid 5-alpha-reductase DET2 [Solanum lycopersicum]
Solyc07g008780.3.1	1374	422.48454783299	1007.93673274401	1.2544346034447	1.20252718368877e-05	Up	1.73287986139137e-06	NA	NA	NA	NA	gi|723713041|ref|XP_010323346.1|//PREDICTED: uncharacterized protein LOC101260152 isoform X2 [Solanum lycopersicum]
Solyc06g075610.1.1	1872	545.851676617062	3087.8613764214	2.5000270987026	3.0904808236531e-14	Up	1.1197060386875e-15	NA	NA	NA	K07195//exocyst complex component 7	gi|460391284|ref|XP_004241253.1|//PREDICTED: exocyst complex component EXO70A1-like [Solanum lycopersicum]
Solyc07g008060.1.1	2647	540.079135432143	1243.17086237146	1.20278187547979	0.0109962637383292	Up	0.00325215961245144	GO:0030136//clathrin-coated vesicle	GO:0030276//clathrin binding;GO:0005545//1-phosphatidylinositol binding	GO:0048268//clathrin coat assembly	K20043//clathrin coat assembly protein AP180	gi|723712783|ref|XP_010323295.1|//PREDICTED: putative clathrin assembly protein At2g25430 [Solanum lycopersicum]
Solyc08g041820.3.1	2055	5328.91103002555	2373.46159268149	-1.16684804218768	2.70722779968454e-05	Down	4.21200567909769e-06	GO:0043231//intracellular membrane-bounded organelle	GO:0003677//DNA binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0006351//transcription, DNA-templated	K16670//homeobox protein Meis2;K15613//homeobox protein Meis1	gi|460398803|ref|XP_004244941.1|//PREDICTED: homeobox protein knotted-1-like 3 [Solanum lycopersicum]
Solyc01g014320.3.1	1238	478.189013227313	5.2141762733366	-6.51899781689265	3.02371891684712e-38	Down	1.09326351175701e-40	NA	NA	NA	K18848//indole-3-acetate O-methyltransferase [EC:2.1.1.278]	gi|565396959|ref|XP_006364073.1|//PREDICTED: probable S-adenosylmethionine-dependent methyltransferase At5g38100 [Solanum tuberosum];gi|970000431|ref|XP_015087886.1|//PREDICTED: probable S-adenosylmethionine-dependent methyltransferase At5g38100 isoform X2 [Solanum pennellii];gi|970000429|ref|XP_015087878.1|//PREDICTED: probable S-adenosylmethionine-dependent methyltransferase At5g38100 isoform X1 [Solanum pennellii]
Solyc01g098140.3.1	2013	111.547655900608	290.34709954322	1.3801184255103	0.0421698482332877	Up	0.0153072663605308	NA	NA	NA	K14493//gibberellin receptor GID1 [EC:3.-.-.-]	gi|460368579|ref|XP_004230143.1|//PREDICTED: carboxylesterase 1-like [Solanum lycopersicum]
Solyc08g080900.3.1	1482	1660.82307852597	5607.16704299299	1.75537365333928	9.55923790991176e-09	Up	7.85676144004601e-10	NA	GO:0016765//transferase activity, transferring alkyl or aryl (other than methyl) groups	NA	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|460400183|ref|XP_004245615.1|//PREDICTED: glutathione S-transferase T1-like [Solanum lycopersicum]
Solyc01g097270.3.1	1023	981.399774853976	4108.12283447726	2.06556647390064	0.00591547232264228	Up	0.00161888317402861	NA	GO:0030247//polysaccharide binding	GO:0006952//defense response	K20547	gi|460368474|ref|XP_004230091.1|//PREDICTED: wound-induced protein WIN2 [Solanum lycopersicum]
Solyc09g090910.2.1	1308	146.266136567793	36.9177400839142	-1.9862096500486	0.00696744582676281	Down	0.00194495310111177	GO:0005634//nucleus	NA	GO:0006355//regulation of transcription, DNA-templated;GO:0009734//auxin-activated signaling pathway	K14484//auxin-responsive protein IAA	gi|723732286|ref|XP_010326736.1|//PREDICTED: IAA13 isoform X1 [Solanum lycopersicum];gi|525313477|ref|NP_001266067.1|//IAA13 [Solanum lycopersicum]
Solyc10g008660.2.1	183	54.7777107262273	1.71172588676867	-5.00006537977951	6.04551292650189e-06	Down	8.22278092619852e-07	NA	NA	NA	NA	gi|460405358|ref|XP_004248143.1|//PREDICTED: malonyl-coenzyme:anthocyanin 5-O-glucoside-6'''-O-malonyltransferase [Solanum lycopersicum]
Solyc12g089310.2.1	1609	17.7702822770777	2.91512069214071	-2.60783907805594	0.0383577105207654	Down	0.0136685445273042	GO:0032991//macromolecular complex;GO:0015630//microtubule cytoskeleton	GO:0032561//guanyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity	GO:0007017//microtubule-based process;GO:0009207//purine ribonucleoside triphosphate catabolic process;GO:0043623//cellular protein complex assembly	K07375//tubulin beta	gi|460414901|ref|XP_004252800.1|//PREDICTED: tubulin beta chain-like [Solanum lycopersicum]
Solyc12g088190.2.1	1936	467.501862587045	194.272921037667	-1.26688728972155	0.00111152569284135	Down	0.000249915125213173	GO:0031224//intrinsic component of membrane	NA	NA	K14209//solute carrier family 36 (proton-coupled amino acid transporter)	gi|970065186|ref|XP_015059567.1|//PREDICTED: amino acid permease 6-like isoform X1 [Solanum pennellii]
Solyc02g032410.3.1	384	23.8042681185248	2.14750502844018	-3.47048685816114	0.00132578694453205	Down	0.000302734859930048	NA	NA	NA	NA	NA
Solyc08g066980.3.1	1854	289.372555134209	1836.43811676579	2.66591027736127	7.20942633027993e-18	Up	1.67686075372547e-19	GO:0016021//integral component of membrane	NA	GO:0034219//carbohydrate transmembrane transport	K15281//solute carrier family 35	gi|460399317|ref|XP_004245188.1|//PREDICTED: UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter [Solanum lycopersicum];gi|698549675|ref|XP_009768727.1|//PREDICTED: UDP-N-acetylglucosamine/UDP-glucose/GDP-mannose transporter-like [Nicotiana sylvestris]
Solyc03g007220.3.1	539	583.322498274797	1434.43764702058	1.29811963363995	0.00171958318920046	Up	0.000404000776857408	NA	NA	NA	NA	gi|565367847|ref|XP_006350566.1|//PREDICTED: uncharacterized protein LOC102581761 [Solanum tuberosum]
Solyc01g096370.3.1	1854	2362.73742258864	1011.15894255134	-1.22444951748462	0.0307113188410964	Down	0.0105740439889372	NA	NA	NA	K13422//transcription factor MYC2	gi|460368332|ref|XP_004230021.1|//PREDICTED: transcription factor MYC2-like isoform X1 [Solanum lycopersicum];gi|460368334|ref|XP_004230022.1|//PREDICTED: transcription factor MYC2-like isoform X2 [Solanum lycopersicum]
Solyc10g007880.3.1	2219	45.3732734904066	174.246149351569	1.9412121215494	0.000487633433916307	Up	0.000100205871521567	NA	NA	NA	K07428//cytochrome P450, family 4, subfamily X [EC:1.14.14.1];K07426//cytochrome P450, family 4, subfamily B, polypeptide 1 [EC:1.14.14.1]	gi|460405475|ref|XP_004248201.1|//PREDICTED: cytochrome P450 CYP72A219-like [Solanum lycopersicum]
Solyc04g081630.2.1	2136	70.1503308385844	554.887134599722	2.98367254068134	1.51611048779003e-06	Up	1.8439945287233e-07	GO:0031090//organelle membrane;GO:0009536//plastid	NA	GO:0006970//response to osmotic stress;GO:0015031//protein transport;GO:0010073//meristem maintenance;GO:0010038//response to metal ion;GO:0009933//meristem structural organization	K09487//heat shock protein 90kDa beta	gi|723696102|ref|XP_010320432.1|//PREDICTED: endoplasmin homolog [Solanum lycopersicum]
Solyc04g006970.3.1	3171	1164.74158979316	49.1418836983451	-4.56691294314215	7.55212823284726e-14	Down	2.87413259495193e-15	NA	NA	NA	K01595//phosphoenolpyruvate carboxylase [EC:4.1.1.31]	gi|460382446|ref|XP_004236950.1|//PREDICTED: phosphoenolpyruvate carboxylase 4 [Solanum lycopersicum]
Solyc08g081030.1.1	1143	1723.22851370723	4645.55876814093	1.43073810750496	0.00351663514811242	Up	0.000901058163962001	NA	NA	NA	K20884	gi|460400167|ref|XP_004245607.1|//PREDICTED: uncharacterized protein LOC101258773 [Solanum lycopersicum]
Solyc06g031690.3.1	1600	523.068327756664	1199.89189042791	1.19783310436189	0.0348532680621615	Up	0.0122508691600635	NA	NA	NA	K15502//serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A	gi|723705372|ref|XP_010322020.1|//PREDICTED: uncharacterized protein LOC101253493 [Solanum lycopersicum]
Solyc02g086960.2.1	1430	10.3926519293625	1.07613280500663	-3.27163580250058	0.0139100814651419	Down	0.0042428133528126	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|565343331|ref|XP_006338791.1|//PREDICTED: probable receptor-like protein kinase At5g15080 [Solanum tuberosum]
Solyc01g104710.3.1	225	79.829968932004	21.5017321926222	-1.89247756073108	0.0027829258476722	Down	0.00069199710488375	NA	NA	NA	NA	gi|971558255|ref|XP_015166147.1|//PREDICTED: uncharacterized protein LOC107061424 [Solanum tuberosum]
Solyc02g071220.3.1	1248	332.447180287823	927.547274935166	1.48029567318528	0.00489335596846902	Up	0.00130505300262397	NA	NA	GO:0050794//regulation of cellular process	K14492//two-component response regulator ARR-A family	gi|460374439|ref|XP_004233018.1|//PREDICTED: two-component response regulator ARR9-like [Solanum lycopersicum]
Solyc12g015680.1.1	594	719.509976679508	271.022535785622	-1.40860187336883	0.00504193495527213	Down	0.00134749789881099	NA	NA	NA	NA	gi|460413103|ref|XP_004251935.1|//PREDICTED: protein TIC 20-v, chloroplastic [Solanum lycopersicum]
Solyc10g084930.2.1	3078	231.213150451781	779.178208952691	1.75272987583291	0.000837419158207898	Up	0.000182728930675005	NA	NA	NA	K08269//serine/threonine-protein kinase ULK/ATG1 [EC:2.7.11.1]	gi|460408224|ref|XP_004249546.1|//PREDICTED: serine/threonine-protein kinase ATG1-like [Solanum lycopersicum]
Solyc10g085710.2.1	4439	934.533376905399	2511.14950756628	1.42602982969653	2.05776859803148e-05	Up	3.13021978849206e-06	NA	NA	NA	K07119//uncharacterized protein;K20724;K04460//serine/threonine-protein phosphatase 5 [EC:3.1.3.16];K01183//chitinase [EC:3.2.1.14];K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460408324|ref|XP_004249595.1|//PREDICTED: MACPF domain-containing protein CAD1-like [Solanum lycopersicum]
Solyc10g081320.1.1	1310	26.132325133063	127.207025005251	2.28327094583163	0.000115153087054802	Up	2.04526785379504e-05	NA	NA	NA	K09422//myb proto-oncogene protein, plant	gi|460407841|ref|XP_004249358.1|//PREDICTED: transcription factor WER [Solanum lycopersicum]
Solyc08g082400.1.1	753	3546.07157384999	171.788736062269	-4.36751430659009	1.93594953237178e-15	Down	5.91724547690792e-17	NA	NA	NA	NA	gi|460399976|ref|XP_004245512.1|//PREDICTED: uncharacterized protein LOC101255121 [Solanum lycopersicum]
Solyc10g079370.2.1	1651	952.759197669987	2456.48999278737	1.3664148262807	9.55282456475941e-07	Up	1.11416386100836e-07	NA	NA	NA	K03124//transcription initiation factor TFIIB	gi|460407554|ref|XP_004249217.1|//PREDICTED: transcription initiation factor IIB-2 isoform X1 [Solanum lycopersicum];gi|723738253|ref|XP_010312094.1|//PREDICTED: transcription initiation factor IIB-2 isoform X2 [Solanum lycopersicum]
Solyc06g048900.1.1	2553	19.755909013172	47.437595912803	1.26374666803741	0.0310849760504432	Up	0.0107397734833591	NA	NA	NA	K01176//alpha-amylase [EC:3.2.1.1];K17710//pentatricopeptide repeat domain-containing protein 1	gi|460390960|ref|XP_004241092.1|//PREDICTED: pentatricopeptide repeat-containing protein At2g40720 [Solanum lycopersicum]
Solyc09g007740.2.1	349	34.3901337226898	6.76770751228216	-2.34525560133065	0.00739193167496949	Down	0.0020827348863536	NA	NA	NA	NA	NA
Solyc09g006010.2.1	861	421.39625845843	51.9057535497383	-3.02121113498406	0.00169807719346565	Down	0.000397935415063312	NA	NA	NA	K13449//pathogenesis-related protein 1	gi|460402446|ref|XP_004246723.1|//PREDICTED: pathogenesis-related leaf protein 4-like [Solanum lycopersicum]
Solyc07g006270.3.1	1788	379.305645232508	885.311402269808	1.2228241591178	4.50786387621205e-05	Up	7.29578982798296e-06	GO:0043231//intracellular membrane-bounded organelle	GO:0015002//heme-copper terminal oxidase activity	NA	K02267//cytochrome c oxidase subunit 6b	gi|460394104|ref|XP_004242645.1|//PREDICTED: cytochrome c oxidase subunit 6b-2 [Solanum lycopersicum]
Solyc03g112380.1.1	234	30.8321982127704	168.801761677412	2.45282030399356	0.000160731472125665	Up	2.96204114428689e-05	NA	NA	NA	K00276//primary-amine oxidase [EC:1.4.3.21]	gi|970019019|ref|XP_015070698.1|//PREDICTED: uncharacterized protein LOC107015051 [Solanum pennellii]
Solyc12g009480.2.1	1202	864.450169325284	161.794022579328	-2.41762449412088	0.00227146458281672	Down	0.00054974726167545	NA	GO:0004871//signal transducer activity	NA	K14430//phosphate transporter	gi|460412665|ref|XP_004251718.1|//PREDICTED: SPX domain-containing protein 1 [Solanum lycopersicum]
Solyc02g086200.2.1	4123	293.417767262577	52.4472959690847	-2.48401593420883	1.10744419393723e-09	Down	7.89675243403130e-11	NA	NA	NA	K01148//poly(A)-specific ribonuclease [EC:3.1.13.4]	gi|723671953|ref|XP_010316321.1|//PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic [Solanum lycopersicum]
BGI_novel_G000348	1264	18.3079949430281	55.361905560238	1.59641980292748	0.0235383657426881	Up	0.00777797869050732	NA	NA	NA	K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6];K03549//KUP system potassium uptake protein;K12447//UDP-sugar pyrophosphorylase [EC:2.7.7.64];K02350//DNA polymerase zeta [EC:2.7.7.7];K05387//glutamate receptor, ionotropic, plant	gi|147809962|emb|CAN76029.1|//hypothetical protein VITISV_016069 [Vitis vinifera]
Solyc06g035560.2.1	1025	37.5552296793453	3.24580615969145	-3.53236507189431	0.000119264874391749	Down	2.12363316299905e-05	GO:0009536//plastid	GO:0003677//DNA binding	GO:0006351//transcription, DNA-templated	K09260//MADS-box transcription enhancer factor 2A	gi|460390242|ref|XP_004240747.1|//PREDICTED: MADS-box protein SOC1-like [Solanum lycopersicum]
Solyc11g066580.2.1	2238	32.5367009431289	2.38003462678495	-3.77301350808427	0.00392614921144108	Down	0.00101914802104054	NA	GO:0016709//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen;GO:0005506//iron ion binding	GO:0008152//metabolic process	K13083//flavonoid 3',5'-hydroxylase [EC:1.14.13.88]	gi|902763232|ref|NP_001234840.2|//putative flavonoid 3'5' hydroxylase [Solanum lycopersicum]
Solyc06g005435.1.1	3226	335.683617208812	845.781897874452	1.33318355385466	0.00915753324285049	Up	0.00264574475045975	NA	GO:0032559//adenyl ribonucleotide binding	NA	K03283//heat shock 70kDa protein 1/8	gi|970033412|ref|XP_015078010.1|//PREDICTED: probable mediator of RNA polymerase II transcription subunit 37c [Solanum pennellii]
Solyc09g090680.3.1	1631	402.434481995366	58.6486027930996	-2.77858528167223	0.00422794419809002	Down	0.00110851943824978	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|970049570|ref|XP_015086298.1|//PREDICTED: cysteine-rich repeat secretory protein 3 [Solanum pennellii]
Solyc02g079700.1.1	258	8.80721715764428	47.9460776378421	2.44465465273392	0.0226818170671791	Up	0.0074550536064948	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723678204|ref|XP_010317320.1|//PREDICTED: LOW QUALITY PROTEIN: receptor-like serine/threonine-protein kinase SD1-8 [Solanum lycopersicum]
Solyc05g017990.3.1	2807	2546.68735575039	1169.24807665493	-1.12304080231684	7.8703038516179e-06	Down	1.09981247725196e-06	NA	NA	NA	K15507//21S rRNA (GM2251-2'-O)-methyltransferase [EC:2.1.1.-]	gi|723699643|ref|XP_010321050.1|//PREDICTED: rRNA methyltransferase 1, mitochondrial [Solanum lycopersicum]
Solyc06g068680.3.1	3451	43.6486038232814	10.3914101791866	-2.07054405723085	0.0215570293726711	Down	0.00702523884766899	GO:0031224//intrinsic component of membrane	GO:0016209//antioxidant activity;GO:0016651//oxidoreductase activity, acting on NAD(P)H;GO:0046914//transition metal ion binding;GO:0050662//coenzyme binding	GO:0008152//metabolic process	K13447//respiratory burst oxidase [EC:1.6.3.- 1.11.1.-]	gi|460392071|ref|XP_004241641.1|//PREDICTED: respiratory burst oxidase homolog protein D [Solanum lycopersicum]
Solyc03g120170.1.1	342	70.7245831684269	22.3667389570189	-1.66085684022198	0.00627552855445506	Down	0.00173051887005586	NA	NA	NA	NA	gi|971540624|ref|XP_015161749.1|//PREDICTED: uncharacterized protein LOC107059578 [Solanum tuberosum]
Solyc03g098210.3.1	3613	896.525988308804	2553.51956388064	1.51006980299576	0.00289864797722569	Up	0.000723797629321414	NA	NA	NA	K05391//cyclic nucleotide gated channel, other eukaryote	gi|460379263|ref|XP_004235383.1|//PREDICTED: probable cyclic nucleotide-gated ion channel 20, chloroplastic [Solanum lycopersicum]
Solyc02g071020.3.1	1195	70753.3718195255	2304.81132595265	-4.94007834238058	2.94239556382054e-25	Down	3.1477095825872e-27	GO:0031224//intrinsic component of membrane;GO:0009521//photosystem;GO:0009534//chloroplast thylakoid	GO:0043169//cation binding;GO:0046906//tetrapyrrole binding	GO:0006464//cellular protein modification process;GO:0006091//generation of precursor metabolites and energy	K08912//light-harvesting complex II chlorophyll a/b binding protein 1	gi|970007787|ref|XP_015064801.1|//PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like [Solanum pennellii]
Solyc06g049080.3.1	1516	4604.03796731229	1886.57136373425	-1.28713305642846	2.83544519332085e-07	Down	2.99207743487823e-08	GO:0044429//mitochondrial part	GO:0016209//antioxidant activity;GO:0043169//cation binding;GO:0003824//catalytic activity	GO:0006801//superoxide metabolic process	K04564//superoxide dismutase, Fe-Mn family [EC:1.15.1.1]	gi|460390498|ref|XP_004240868.1|//PREDICTED: superoxide dismutase [Mn], mitochondrial [Solanum lycopersicum]
Solyc02g077040.4.1	1491	3258.88144723455	17637.7524307557	2.43621795549696	0.00339616116557291	Up	0.000865243833557881	NA	GO:0008233//peptidase activity	NA	K16292//KDEL-tailed cysteine endopeptidase [EC:3.4.22.-];K13441;K01365//cathepsin L [EC:3.4.22.15]	gi|922959969|ref|NP_001233949.2|//phytophthora-inhibited protease 1 [Solanum lycopersicum]
Solyc08g005550.3.1	1343	11.9552176483073	0.472406363166584	-4.66146818723855	0.00261280004727882	Down	0.000644695792634936	GO:0031224//intrinsic component of membrane;GO:0043231//intracellular membrane-bounded organelle;GO:0031967//organelle envelope	GO:0043169//cation binding;GO:0003824//catalytic activity	GO:0006091//generation of precursor metabolites and energy;GO:0032501//multicellular organismal process	K17893//ubiquinol oxidase [EC:1.10.3.11]	gi|460397751|ref|XP_004244430.1|//PREDICTED: ubiquinol oxidase 2, mitochondrial-like [Solanum lycopersicum]
Solyc02g072150.3.1	5022	1034.34284835876	4733.49822329892	2.1941923129074	1.50509406837017e-09	Up	1.09566449810905e-10	NA	GO:0004805//trehalose-phosphatase activity;GO:0019203//carbohydrate phosphatase activity;GO:0003825//alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity;GO:0035251//UDP-glucosyltransferase activity	GO:0005992//trehalose biosynthetic process;GO:0016311//dephosphorylation;GO:0005991//trehalose metabolic process	K16055//trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12]	gi|460374473|ref|XP_004233035.1|//PREDICTED: probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7 [Solanum lycopersicum];gi|758375781|gb|AJO70168.1|//alpha,alpha-trehalose-phosphate synthase 7 [Camellia sinensis]
Solyc07g063905.1.1	511	354.0211625009	6.49022823893969	-5.76942257964238	2.66780989427745e-30	Down	1.92916027840251e-32	NA	NA	NA	NA	gi|460397240|ref|XP_004244176.1|//PREDICTED: uncharacterized protein LOC101264952 [Solanum lycopersicum]
Solyc03g005210.3.1	868	72.6442053976713	2.00743926743185	-5.17741947657262	1.02066077176083e-05	Down	1.4533040659484e-06	NA	NA	NA	NA	gi|460376458|ref|XP_004234015.1|//PREDICTED: classical arabinogalactan protein 4-like [Solanum lycopersicum]
Solyc02g093080.3.1	1852	1676.34911032331	576.860495437548	-1.5390282574623	0.0100276080204749	Down	0.00293375187687146	NA	GO:0016701//oxidoreductase activity, acting on single donors with incorporation of molecular oxygen;GO:0046914//transition metal ion binding	GO:0008152//metabolic process	K04124//gibberellin 3-beta-dioxygenase [EC:1.14.11.15];K05278//flavonol synthase [EC:1.14.11.23];K05933//aminocyclopropanecarboxylate oxidase [EC:1.14.17.4];K06901//putative MFS transporter, AGZA family, xanthine/uracil permease	gi|723669316|ref|XP_010315984.1|//PREDICTED: probable 2-oxoglutarate-dependent dioxygenase At3g49630 isoform X2 [Solanum lycopersicum];gi|723669313|ref|XP_010315983.1|//PREDICTED: probable 2-oxoglutarate-dependent dioxygenase At3g49630 isoform X1 [Solanum lycopersicum]
Solyc03g020050.3.1	800	4.55865820641574	169.783689972025	5.2189448202745	7.64507546359842e-12	Up	3.85274415788917e-13	NA	GO:0004866//endopeptidase inhibitor activity	GO:0051346//negative regulation of hydrolase activity	NA	gi|908212427|ref|NP_001234246.2|//proteinase inhibitor type-2 CEVI57 precursor [Solanum lycopersicum]
Solyc04g016235.1.1	315	0.74021349745418	8.85813037335158	3.58098888299147	0.0128132329397936	Up	0.00386273730248286	NA	NA	NA	K19090//CRISPR-associated protein Cas5t;K19589//release factor glutamine methyltransferase [EC:2.1.1.297];K03798//cell division protease FtsH [EC:3.4.24.-]	gi|565363698|ref|XP_006348570.1|//PREDICTED: pentatricopeptide repeat-containing protein At4g39530 [Solanum tuberosum]
Solyc10g081580.2.1	1495	871.524195348162	2500.75670126068	1.52075208220258	1.05550530742353e-08	Up	8.73423953511349e-10	NA	NA	GO:0006810//transport	K08486//syntaxin 1B/2/3	gi|460407888|ref|XP_004249381.1|//PREDICTED: syntaxin-132 [Solanum lycopersicum]
Solyc04g071890.3.1	1383	454.782844596541	5026.09590091456	3.4661884602078	0.000112674254920409	Up	1.99452078655518e-05	NA	GO:0016209//antioxidant activity;GO:0005506//iron ion binding;GO:0003824//catalytic activity	GO:0008152//metabolic process;GO:0006950//response to stress	K00430//peroxidase [EC:1.11.1.7]	gi|460384249|ref|XP_004237825.1|//PREDICTED: peroxidase 12-like [Solanum lycopersicum]
Solyc09g008010.3.1	2075	1108.71512332533	3872.01156160551	1.80419453781149	0.00217329770801134	Up	0.000523882372063119	NA	GO:0005524//ATP binding;GO:0004672//protein kinase activity	GO:0006468//protein phosphorylation	K00924;K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460402287|ref|XP_004246645.1|//PREDICTED: probable receptor-like protein kinase At5g47070 isoform X1 [Solanum lycopersicum];gi|723728264|ref|XP_010325981.1|//PREDICTED: probable receptor-like protein kinase At5g47070 isoform X2 [Solanum lycopersicum]
Solyc04g078680.3.1	2705	1336.17884426194	2886.47826709546	1.11119724110106	0.0139599947453984	Up	0.00426011916581842	NA	GO:0061630//ubiquitin protein ligase activity;GO:0008270//zinc ion binding	GO:0043161//proteasome-mediated ubiquitin-dependent protein catabolic process;GO:0016567//protein ubiquitination	K10635//E3 ubiquitin-protein ligase Arkadia [EC:2.3.2.27]	gi|723695292|ref|XP_010320322.1|//PREDICTED: probable E3 ubiquitin-protein ligase HIP1 isoform X2 [Solanum lycopersicum];gi|460384889|ref|XP_004238139.1|//PREDICTED: probable E3 ubiquitin-protein ligase HIP1 isoform X1 [Solanum lycopersicum]
Solyc03g078640.1.1	1455	2142.6636270642	793.144891209979	-1.43374903593243	0.0124343381453981	Down	0.00373243346820081	NA	NA	NA	NA	gi|723682617|ref|XP_010318077.1|//PREDICTED: protein AF-9-like [Solanum lycopersicum]
Solyc12g089190.1.1	267	1.23886418382068	41.7172487150005	5.07355407494859	4.49999763009621e-06	Up	5.94956448261192e-07	NA	NA	NA	NA	gi|460414885|ref|XP_004252792.1|//PREDICTED: protein RADIALIS-like 3 [Solanum lycopersicum]
Solyc05g055030.2.1	1097	4.59451072184773	52.0748341946287	3.50260320127882	2.44500921848771e-06	Up	3.09408315818018e-07	NA	NA	NA	K09422//myb proto-oncogene protein, plant	gi|460389093|ref|XP_004240193.1|//PREDICTED: myb-related protein Myb4-like [Solanum lycopersicum]
Solyc06g011370.3.1	2549	1135.68758097556	393.913381960208	-1.52761568108294	8.28207987473516e-05	Down	1.4186391955339e-05	GO:0044424//intracellular part;GO:0005737//cytoplasm	GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0016462//pyrophosphatase activity	GO:0016485//protein processing;GO:0051604//protein maturation;GO:0006950//response to stress;GO:0009408//response to heat	K03695//ATP-dependent Clp protease ATP-binding subunit ClpB	gi|723704622|ref|XP_010321892.1|//PREDICTED: chaperone protein ClpB4, mitochondrial isoform X1 [Solanum lycopersicum];gi|723704628|ref|XP_010321894.1|//PREDICTED: chaperone protein ClpB4, mitochondrial isoform X2 [Solanum lycopersicum];gi|565378978|ref|XP_006355921.1|//PREDICTED: chaperone protein ClpB4, mitochondrial-like [Solanum tuberosum]
Solyc03g117890.3.1	2465	9181.60008961762	1930.65228522045	-2.24965724083468	4.05700999385331e-13	Down	1.70428293688411e-14	NA	NA	NA	NA	gi|820867009|ref|NP_001295218.1|//uncharacterized protein LOC101249904 [Solanum lycopersicum]
Solyc11g071710.2.1	767	1329.55484404245	104.635074033338	-3.66750485542996	1.65800535014856e-40	Down	5.19130943091096e-43	NA	NA	NA	K14493//gibberellin receptor GID1 [EC:3.-.-.-]	gi|460412083|ref|XP_004251432.1|//PREDICTED: uncharacterized protein LOC101260110 [Solanum lycopersicum];gi|460412085|ref|XP_004251433.1|//PREDICTED: probable carboxylesterase 15 [Solanum lycopersicum]
Solyc06g073710.3.1	3731	97.9080067691172	46.062301201377	-1.08784035833211	0.00513314373682733	Down	0.00137436154247915	NA	NA	NA	K19891//glucan endo-1,3-beta-glucosidase 1/2/3 [EC:3.2.1.39]	gi|723707781|ref|XP_010322455.1|//PREDICTED: glucan endo-1,3-beta-glucosidase 14 [Solanum lycopersicum]
Solyc01g105990.3.1	4738	3805.28050176852	1079.40850482104	-1.8177618445357	2.02706174948966e-07	Down	2.08614786429885e-08	NA	NA	NA	K18681//DIS3-like exonuclease 1 [EC:3.1.13.-]	gi|460369379|ref|XP_004230540.1|//PREDICTED: protein EXECUTER 1, chloroplastic [Solanum lycopersicum]
Solyc05g006780.3.1	2241	448.996584407968	2235.66339867741	2.31592661716965	5.634045392492e-08	Up	5.250154123017e-09	NA	NA	NA	K03094//S-phase kinase-associated protein 1	gi|460386119|ref|XP_004238747.1|//PREDICTED: uncharacterized protein LOC101250988 [Solanum lycopersicum]
Solyc04g007320.2.1	4363	143.778742734215	2488.16369746393	4.11315910575661	7.79177736841266e-07	Up	8.88975883550857e-08	NA	NA	NA	K03283//heat shock 70kDa protein 1/8	gi|460382957|ref|XP_004237202.1|//PREDICTED: TMV resistance protein N-like [Solanum lycopersicum]
Solyc04g064610.3.1	2786	85.6791696260491	4.4043217590055	-4.28195272366622	0.00055264268297833	Down	0.0001152128569367	GO:0031224//intrinsic component of membrane	NA	GO:0071702//organic substance transport	K15382//solute carrier family 50 (sugar transporter)	gi|460384038|ref|XP_004237722.1|//PREDICTED: bidirectional sugar transporter SWEET1-like [Solanum lycopersicum]
Solyc11g005190.2.1	981	218.891821299331	17.6095981048609	-3.63578416174985	3.00372336769886e-05	Down	4.71025205304499e-06	NA	NA	NA	K10143//E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27]	gi|460408854|ref|XP_004249856.1|//PREDICTED: WD repeat-containing protein RUP2-like [Solanum lycopersicum]
Solyc08g016210.3.1	4116	1360.28986967568	13571.4148781258	3.31858511665864	6.58241166999843e-06	Up	9.02601474845295e-07	NA	NA	NA	K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|723720799|ref|XP_010324742.1|//PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2 isoform X1 [Solanum lycopersicum];gi|723720810|ref|XP_010324745.1|//PREDICTED: LRR receptor-like serine/threonine-protein kinase GSO2 isoform X1 [Solanum lycopersicum]
Solyc05g015840.3.1	1665	1218.24420655436	6586.8114321326	2.43477688739444	8.34598262085147e-09	Up	6.79736544899376e-10	GO:0005634//nucleus	GO:0003677//DNA binding	NA	K20641;K13415//protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1]	gi|460387122|ref|XP_004239238.1|//PREDICTED: squamosa promoter-binding-like protein 13A [Solanum lycopersicum]
Solyc01g098740.3.1	1806	140.748585017957	21.6441873793933	-2.7010688772027	0.00109520159513363	Down	0.000245847412666937	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460368642|ref|XP_004230174.1|//PREDICTED: pto-interacting protein 1 [Solanum lycopersicum]
Solyc06g009140.3.1	1355	2524.51982046324	31931.8189706942	3.66091382781873	4.03328518701809e-11	Up	2.29416773348353e-12	NA	NA	NA	NA	gi|460389824|ref|XP_004240548.1|//PREDICTED: uncharacterized protein At5g01610-like [Solanum lycopersicum];gi|460389822|ref|XP_004240547.1|//PREDICTED: late embryogenesis abundant protein Lea5-like [Solanum lycopersicum]
Solyc08g066610.3.1	1081	1688.47902034604	86.3024835681442	-4.29017836635564	4.2371053892791e-07	Down	4.614888156953e-08	NA	NA	NA	NA	gi|460399741|ref|XP_004245395.1|//PREDICTED: uncharacterized protein LOC101250825 [Solanum lycopersicum]
Solyc12g089220.2.1	1346	315.33688976417	1127.22269381921	1.83780670307767	0.0143433407160186	Up	0.0043952811997312	NA	GO:0004518//nuclease activity	GO:0090305//nucleic acid phosphodiester bond hydrolysis	K08999//uncharacterized protein	gi|723752519|ref|XP_004252794.2|//PREDICTED: bifunctional nuclease 1-like [Solanum lycopersicum]
Solyc05g053480.3.1	1047	161.810426877515	29.7646965590495	-2.44263048460114	1.73436828751469e-06	Down	2.13337384404297e-07	NA	GO:0016301//kinase activity;GO:0005488//binding	GO:0044237//cellular metabolic process	K00878//hydroxyethylthiazole kinase [EC:2.7.1.50]	gi|460388436|ref|XP_004239873.1|//PREDICTED: hydroxyethylthiazole kinase [Solanum lycopersicum]
Solyc03g114640.3.1	3566	2448.42980996396	443.953288379701	-2.46337704535024	5.05041436535715e-12	Down	2.49433391758544e-13	NA	NA	NA	K04773//protease IV [EC:3.4.21.-]	gi|970017716|ref|XP_015070002.1|//PREDICTED: serine protease SPPA, chloroplastic isoform X1 [Solanum pennellii];gi|971546474|ref|XP_015163172.1|//PREDICTED: serine protease SPPA, chloroplastic isoform X3 [Solanum tuberosum]
Solyc10g080770.2.1	4430	986.397513331736	4148.41444944298	2.07231896664686	2.94383435745111e-06	Up	3.7845850226811e-07	GO:0043231//intracellular membrane-bounded organelle	GO:0003677//DNA binding;GO:0005515//protein binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0006351//transcription, DNA-templated	K14431//transcription factor TGA	gi|836468085|ref|NP_001296800.1|//TGACG-sequence-specific DNA-binding protein TGA-2.1 [Solanum lycopersicum]
Solyc04g039965.1.1	4146	48.8800703558012	161.054075411325	1.72022690120287	0.0252825600878854	Up	0.00846364515242651	NA	NA	NA	K15078//structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]	gi|971537853|ref|XP_015170299.1|//PREDICTED: uncharacterized protein LOC102587762 [Solanum tuberosum];gi|565346075|ref|XP_006340095.1|//PREDICTED: putative disease resistance protein RGA1 [Solanum tuberosum]
Solyc06g036260.3.1	1128	5387.97192905815	197.16347538475	-4.77227811275537	1.60409901070572e-59	Down	1.07625548653284e-62	GO:0031224//intrinsic component of membrane	GO:0046914//transition metal ion binding;GO:0003824//catalytic activity	GO:0006631//fatty acid metabolic process	K15746//beta-carotene 3-hydroxylase [EC:1.14.13.129]	gi|350538547|ref|NP_001234348.1|//beta-carotene hydroxylase [Solanum lycopersicum]
Solyc06g062540.3.1	1087	457.406518095627	13.4125869468054	-5.09181749610255	3.06271165671359e-06	Down	3.94768782947503e-07	NA	GO:0042578//phosphoric ester hydrolase activity	GO:0006796//phosphate-containing compound metabolic process	K13248//pyridoxal phosphate phosphatase PHOSPHO2 [EC:3.1.3.74]	gi|525314386|ref|NP_001266264.1|//inorganic pyrophosphatase 1-like [Solanum lycopersicum]
Solyc02g064770.3.1	1185	1837.1700283366	384.291623274122	-2.25721171845456	1.63243533840379e-15	Down	4.94087332184238e-17	NA	NA	NA	K05605//3-hydroxyisobutyryl-CoA hydrolase [EC:3.1.2.4]	gi|460375309|ref|XP_004233449.1|//PREDICTED: probable esterase KAI2 [Solanum lycopersicum]
Solyc02g032860.3.1	1730	1568.78565588886	5274.71939274542	1.74944609712818	0.000454592228098647	Up	9.26874715856418e-05	NA	GO:0016667//oxidoreductase activity, acting on a sulfur group of donors	GO:0006790//sulfur compound metabolic process;GO:0019725//cellular homeostasis	K05907//adenylyl-sulfate reductase (glutathione) [EC:1.8.4.9]	gi|460371578|ref|XP_004231612.1|//PREDICTED: 5'-adenylylsulfate reductase 3, chloroplastic [Solanum lycopersicum]
Solyc03g034050.3.1	730	88.779986312506	193.565624301064	1.12451637296713	0.00698866172389657	Up	0.00195165698656005	NA	NA	NA	NA	gi|970014278|ref|XP_015068123.1|//PREDICTED: protein AE7-like 1 [Solanum pennellii];gi|460377558|ref|XP_004234558.1|//PREDICTED: MIP18 family protein At1g68310 [Solanum lycopersicum]
Solyc09g075440.3.1	2643	693.050149497772	2814.90068361417	2.02205236601864	0.000152958936127387	Up	2.80398109391118e-05	GO:0044464//cell part;GO:0016021//integral component of membrane;GO:0005622//intracellular	GO:0000155//phosphorelay sensor kinase activity;GO:0032559//adenyl ribonucleotide binding;GO:0004871//signal transducer activity;GO:0004673//protein histidine kinase activity	GO:0023014//signal transduction by protein phosphorylation;GO:0007165//signal transduction;GO:0000160//phosphorelay signal transduction system;GO:0006468//protein phosphorylation	K14509//ethylene receptor [EC:2.7.13.-]	gi|350534616|ref|NP_001233894.1|//ethylene receptor [Solanum lycopersicum];gi|698497530|ref|XP_009794737.1|//PREDICTED: ethylene response sensor 1 [Nicotiana sylvestris]
Solyc04g079680.3.1	1857	843.35989989234	332.050062654092	-1.34474765514806	0.0048648327969716	Down	0.00129653923133841	NA	NA	NA	K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30]	gi|460385015|ref|XP_004238201.1|//PREDICTED: cytochrome P450 CYP82D47-like [Solanum lycopersicum]
Solyc01g079790.3.1	2797	10903.389197006	1827.72348663254	-2.57665692139893	3.03297580898191e-14	Down	1.0966104572508e-15	GO:0009536//plastid	GO:0032559//adenyl ribonucleotide binding;GO:0070566//adenylyltransferase activity	GO:0005977//glycogen metabolic process;GO:0005982//starch metabolic process	K00975//glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]	gi|806638523|ref|NP_001233977.2|//ADP-glucose pyrophosphorylase large subunit [Solanum lycopersicum]
Solyc01g005100.3.1	1509	283.821069473593	75.9423043956594	-1.90200601000685	3.00135365894777e-06	Down	3.86412536827404e-07	NA	NA	NA	NA	gi|460365740|ref|XP_004228755.1|//PREDICTED: uncharacterized protein LOC101261647 [Solanum lycopersicum]
Solyc03g025210.3.1	1885	2.40406219524722	19.3842200185638	3.01133655969372	0.00281586912289357	Up	0.000700923438298915	NA	NA	NA	K03327//multidrug resistance protein, MATE family	gi|460377306|ref|XP_004234434.1|//PREDICTED: protein TRANSPARENT TESTA 12-like [Solanum lycopersicum]
Solyc09g090440.1.1	3504	52.4081587285783	143.191877105198	1.45008632632114	0.00120007804789335	Up	0.000271301377682763	NA	NA	NA	K19589//release factor glutamine methyltransferase [EC:2.1.1.297];K03452//magnesium/proton exchanger	gi|723732541|ref|XP_010326776.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Solanum lycopersicum]
Solyc03g111973.1.1	3296	496.3852765016	28.8249874107244	-4.1060684408066	9.23032317591209e-19	Down	1.95423571042123e-20	NA	NA	NA	K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30];K07408//cytochrome P450, family 1, subfamily A, polypeptide 1 [EC:1.14.14.1]	gi|460381083|ref|XP_004236282.1|//PREDICTED: cytochrome P450 71A4-like [Solanum lycopersicum]
Solyc12g099430.2.1	2159	83.5808769479709	23.7529601528945	-1.8150655789095	0.00516526988193526	Down	0.00138373321311573	NA	NA	NA	K08726//soluble epoxide hydrolase / lipid-phosphate phosphatase [EC:3.3.2.10 3.1.3.76];K10144//RING finger and CHY zinc finger domain-containing protein 1 [EC:2.3.2.27]	gi|460415130|ref|XP_004252913.1|//PREDICTED: bifunctional epoxide hydrolase 2 [Solanum lycopersicum]
Solyc06g074050.2.1	858	193.311485932912	63.1087804100777	-1.61501471189186	0.0254770631154737	Down	0.00854015314587205	GO:0016021//integral component of membrane	NA	NA	NA	gi|460391463|ref|XP_004241340.1|//PREDICTED: protein YLS9-like [Solanum lycopersicum]
Solyc11g072920.2.1	1816	2.49645547293178	395.797773610156	7.30873851210155	4.59836681628707e-20	Up	8.57008874363923e-22	NA	GO:0046872//metal ion binding;GO:0003824//catalytic activity	NA	K00430//peroxidase [EC:1.11.1.7]	gi|460411806|ref|XP_004251296.1|//PREDICTED: peroxidase 15-like [Solanum lycopersicum]
Solyc08g076520.3.1	919	214.568962287506	87.0488575737101	-1.30154413401848	0.0144401615761159	Down	0.00443140935799024	NA	NA	NA	NA	gi|460400924|ref|XP_004245981.1|//PREDICTED: uncharacterized protein LOC101268496 [Solanum lycopersicum]
Solyc07g062370.1.1	936	0.718117729628925	9.66617528511162	3.750652869834	0.00673332930509104	Up	0.00187332525470402	NA	NA	NA	K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]	gi|460397638|ref|XP_004244374.1|//PREDICTED: bile salt-activated lipase-like [Solanum lycopersicum]
Solyc09g089570.3.1	1739	23.8910681174535	60.9297842548069	1.35067627697187	0.0115890052601946	Up	0.00344585861639228	NA	NA	NA	NA	gi|970051278|ref|XP_015087224.1|//PREDICTED: uncharacterized protein LOC107030464 [Solanum pennellii]
Solyc04g015200.3.1	2437	135.156856247874	349.412058261728	1.37029469785367	0.0303075439884686	Up	0.0104225958266591	NA	NA	NA	K00850//6-phosphofructokinase 1 [EC:2.7.1.11]	gi|460381826|ref|XP_004236642.1|//PREDICTED: ATP-dependent 6-phosphofructokinase 2 [Solanum lycopersicum]
Solyc07g055850.3.1	989	310.104797135593	134.710351874791	-1.20289512417229	0.0169447343853756	Down	0.00530359827918589	NA	GO:0030580//quinone cofactor methyltransferase activity	GO:0006730//one-carbon metabolic process;GO:0006743//ubiquinone metabolic process	K00591//polyprenyldihydroxybenzoate methyltransferase / 3-demethylubiquinol 3-O-methyltransferase [EC:2.1.1.114 2.1.1.64]	gi|460395332|ref|XP_004243238.1|//PREDICTED: hexaprenyldihydroxybenzoate methyltransferase, mitochondrial [Solanum lycopersicum]
Solyc01g066453.1.1	571	5.26262332509997	32.3720167027916	2.62089320293805	0.0075495163633793	Up	0.00213191948594608	NA	GO:0003824//catalytic activity	NA	K08726//soluble epoxide hydrolase / lipid-phosphate phosphatase [EC:3.3.2.10 3.1.3.76]	gi|723658489|ref|XP_010321810.1|//PREDICTED: bifunctional epoxide hydrolase 2-like, partial [Solanum lycopersicum]
Solyc11g066770.2.1	1875	403.123717883843	1845.87978020336	2.19501402303572	3.25094831273591e-12	Up	1.55955362997283e-13	GO:0030119//AP-type membrane coat adaptor complex	GO:0022892//substrate-specific transporter activity	GO:0015031//protein transport	K11824//AP-2 complex subunit alpha	gi|723745242|ref|XP_010313320.1|//PREDICTED: LOW QUALITY PROTEIN: AP-2 complex subunit alpha-1-like [Solanum lycopersicum]
Solyc07g053810.3.1	1138	76.4417650595828	35.969791627208	-1.08757528891776	0.0255742983245627	Down	0.00857942019237605	NA	NA	NA	K20641;K13415//protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1]	gi|723715289|ref|XP_004243367.2|//PREDICTED: squamosa promoter-binding-like protein 3 [Solanum lycopersicum]
Solyc03g031760.3.1	2166	645.423461892449	118.617340005689	-2.44393109759663	1.36949002630432e-08	Down	1.15433164408412e-09	GO:0043231//intracellular membrane-bounded organelle	GO:0003677//DNA binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0006351//transcription, DNA-templated	K09338//homeobox-leucine zipper protein	gi|723680461|ref|XP_010317738.1|//PREDICTED: homeobox-leucine zipper protein PROTODERMAL FACTOR 2-like [Solanum lycopersicum]
Solyc07g042540.3.1	491	5.94750111783535	142.883246420161	4.58640931708361	2.85838906717904e-10	Up	1.8528174250128e-11	NA	NA	NA	NA	NA
Solyc12g088000.2.1	1615	0.422176873951485	29.8248699463825	6.14252448397615	3.91100695527823e-06	Up	5.12127904946042e-07	NA	GO:0016769//transferase activity, transferring nitrogenous groups;GO:0016846//carbon-sulfur lyase activity;GO:0048037//cofactor binding	GO:0008652//cellular amino acid biosynthetic process	K00815//tyrosine aminotransferase [EC:2.6.1.5]	gi|460414924|ref|XP_004252811.1|//PREDICTED: probable aminotransferase TAT2 [Solanum lycopersicum]
Solyc02g081845.1.1	2895	295.965632354878	82.8577013033258	-1.83672195754343	0.000571914522095957	Down	0.000119699569165379	GO:0031224//intrinsic component of membrane;GO:0016021//integral component of membrane;GO:0005886//plasma membrane	GO:0005275//amine transmembrane transporter activity;GO:0015171//amino acid transmembrane transporter activity	GO:0003333//amino acid transmembrane transport;GO:0015837//amine transport	K03294//basic amino acid/polyamine antiporter, APA family	gi|723673500|ref|XP_004232627.2|//PREDICTED: cationic amino acid transporter 5 [Solanum lycopersicum];gi|720015137|ref|XP_010260734.1|//PREDICTED: cationic amino acid transporter 5-like [Nelumbo nucifera]
Solyc03g082885.1.1	640	735.522418655541	1505.94168711236	1.03382468675775	0.000166431063148839	Up	3.07638154970587e-05	NA	NA	NA	K00457//4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27];K01194//alpha,alpha-trehalase [EC:3.2.1.28]	gi|723682306|ref|XP_010318036.1|//PREDICTED: uncharacterized protein LOC101264902 [Solanum lycopersicum]
Solyc07g064740.3.1	2348	161.253811838794	1438.55303405894	3.15721323925559	4.23096412166161e-16	Up	1.20330461638132e-17	NA	NA	NA	K18270//Rab3 GTPase-activating protein catalytic subunit	gi|460397096|ref|XP_004244104.1|//PREDICTED: rab3 GTPase-activating protein catalytic subunit [Solanum lycopersicum]
Solyc08g007840.2.1	1050	14.7116190618092	1749.70576818554	6.89401249892516	5.08675501140349e-30	Up	3.73524205027019e-32	NA	NA	NA	K09286//EREBP-like factor	gi|460398337|ref|XP_004244718.1|//PREDICTED: ethylene-responsive transcription factor ERF027-like [Solanum lycopersicum]
Solyc01g067830.3.1	1210	408.217073856815	174.652934645825	-1.2248456408313	9.23790788487487e-05	Down	1.6008287519302e-05	NA	NA	NA	K11095//U1 small nuclear ribonucleoprotein C	gi|969996832|ref|XP_015064876.1|//PREDICTED: U1 small nuclear ribonucleoprotein C-like [Solanum pennellii]
Solyc04g015490.3.1	2767	4962.03146648116	1601.02021084432	-1.63193936388027	1.94722674145903e-06	Down	2.41697668445601e-07	GO:0009532//plastid stroma	GO:0051003//ligase activity, forming nitrogen-metal bonds, forming coordination complexes;GO:0032559//adenyl ribonucleotide binding;GO:0016462//pyrophosphatase activity	GO:0006779//porphyrin-containing compound biosynthetic process	K03404//magnesium chelatase subunit D [EC:6.6.1.1]	gi|460381795|ref|XP_004236627.1|//PREDICTED: magnesium-chelatase subunit ChlD, chloroplastic [Solanum lycopersicum]
Solyc12g100060.1.1	483	811.009274134582	2646.35933266728	1.70621865219961	3.27919206791334e-08	Up	2.92374661788009e-09	NA	GO:0046914//transition metal ion binding	NA	NA	gi|460415039|ref|XP_004252868.1|//PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 5-like [Solanum lycopersicum]
Solyc06g082560.2.1	2562	1.73210040254527	16.6763282829854	3.26720721326923	0.0195755463624894	Up	0.00627587871864363	NA	GO:0032559//adenyl ribonucleotide binding;GO:0016462//pyrophosphatase activity	GO:0043170//macromolecule metabolic process;GO:0050896//response to stimulus	K03695//ATP-dependent Clp protease ATP-binding subunit ClpB	gi|723711888|ref|XP_010323143.1|//PREDICTED: LOW QUALITY PROTEIN: chaperone protein ClpB1-like [Solanum lycopersicum]
Solyc09g011590.3.1	2239	783.917915940199	15567.2972712712	4.31167208365853	4.59699202370995e-15	Up	1.45990651714659e-16	GO:0005737//cytoplasm	GO:0016765//transferase activity, transferring alkyl or aryl (other than methyl) groups;GO:0004364//glutathione transferase activity	GO:0006749//glutathione metabolic process;GO:0009407//toxin catabolic process;GO:0006950//response to stress	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|460401752|ref|XP_004246381.1|//PREDICTED: probable glutathione S-transferase [Solanum lycopersicum];gi|350536817|ref|NP_001234778.1|//glutathione S-transferase-like protein [Solanum lycopersicum]
Solyc03g025255.1.1	891	24.4163561841513	1.88649932349208	-3.69406442547297	0.000581703230175947	Down	0.000121965136042184	NA	NA	NA	K03327//multidrug resistance protein, MATE family	gi|460377300|ref|XP_004234431.1|//PREDICTED: protein TRANSPARENT TESTA 12-like [Solanum lycopersicum]
Solyc11g010220.2.1	1812	25.7787509916855	61.1746288130548	1.24675107728523	0.0491216533904381	Up	0.0183190003791312	NA	NA	NA	K01074//palmitoyl-protein thioesterase [EC:3.1.2.22];K15271//ATP-dependent DNA helicase HFM1/MER3 [EC:3.6.4.12]	gi|460410191|ref|XP_004250514.1|//PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like [Solanum lycopersicum]
Solyc11g008760.2.1	3376	108.948587934539	47.2220378922634	-1.20611528973455	0.0214313553605486	Down	0.0069786909359532	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial	gi|460410176|ref|XP_004250507.1|//PREDICTED: pentatricopeptide repeat-containing protein At4g01570 [Solanum lycopersicum]
Solyc08g067530.1.1	354	190.847901484343	14.2814343693333	-3.74021053293382	1.38378847816629e-07	Down	1.3807968376514e-08	NA	NA	NA	NA	gi|460399765|ref|XP_004245407.1|//PREDICTED: non-specific lipid-transfer protein 1-like [Solanum lycopersicum]
Solyc05g018650.3.1	1858	7465.23987055113	3165.44288528147	-1.2377812523302	1.33958036814112e-09	Down	9.66686891576414e-11	GO:0044424//intracellular part	GO:0016829//lyase activity	GO:0006779//porphyrin-containing compound biosynthetic process	K01772//ferrochelatase [EC:4.99.1.1]	gi|565342045|ref|XP_006338173.1|//PREDICTED: ferrochelatase-2, chloroplastic-like isoform X1 [Solanum tuberosum]
Solyc02g084890.2.1	3092	571.201464270403	1991.35291535388	1.80167734095477	0.00305236337371434	Up	0.000767718498916168	NA	GO:0032559//adenyl ribonucleotide binding;GO:0016791//phosphatase activity	GO:0012501//programmed cell death;GO:0006950//response to stress	K13457//disease resistance protein RPM1;K15078//structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]	gi|460373248|ref|XP_004232433.1|//PREDICTED: disease resistance RPP13-like protein 4 [Solanum lycopersicum]
BGI_novel_G000179	3555	7.80694543785273	130.031260753305	4.05795650552905	0.000545013025325178	Up	0.000113337843607021	NA	GO:0003676//nucleic acid binding	GO:0015074//DNA integration	K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]	gi|225016149|gb|ACN78973.1|//copia-type polyprotein [Glycine max]
Solyc01g066770.3.1	1803	94.6143842169416	190.539470040358	1.00995844319922	0.00564295197910121	Up	0.00153420649081423	GO:0016021//integral component of membrane	NA	NA	K09518//DnaJ homolog subfamily B member 12	gi|460366756|ref|XP_004229245.1|//PREDICTED: chaperone protein dnaJ 49-like [Solanum lycopersicum]
Solyc03g121240.1.1	1393	692.742566444755	1579.38668522016	1.18897320321123	0.00703740199215793	Up	0.00196841600377043	NA	GO:0046983//protein dimerization activity	NA	K16189//phytochrome-interacting factor 4;K10863//aprataxin [EC:3.-.-.-];K12126//phytochrome-interacting factor 3	gi|460379756|ref|XP_004235627.1|//PREDICTED: transcription factor bHLH87 [Solanum lycopersicum]
Solyc10g047320.2.1	3425	889.417748925597	2480.00399368402	1.47940934383051	0.0057724812909715	Up	0.00157480209365664	NA	GO:0000166//nucleotide binding	NA	K13453;K13457//disease resistance protein RPM1	gi|460406698|ref|XP_004248798.1|//PREDICTED: putative late blight resistance protein homolog R1A-3 [Solanum lycopersicum]
Solyc01g095540.3.1	1629	333.776035779516	97.4823131741	-1.77566798626834	5.70851312139255e-05	Down	9.45815596562916e-06	GO:0031224//intrinsic component of membrane;GO:0012505//endomembrane system	GO:0005402//cation:sugar symporter activity	GO:0008643//carbohydrate transport	K15272//solute carrier family 35 (UDP-sugar transporter), member A1/2/3	gi|969996515|ref|XP_015063511.1|//PREDICTED: CMP-sialic acid transporter 1 [Solanum pennellii]
Solyc02g087400.1.1	1107	3116.75217711566	348.175880197781	-3.16215527704616	4.80058563252351e-10	Down	3.23522395392966e-11	GO:0043229//intracellular organelle	NA	NA	K12271//signal recognition particle 43 kDa protein	gi|723671554|ref|XP_010316268.1|//PREDICTED: signal recognition particle 43 kDa protein, chloroplastic [Solanum lycopersicum]
Solyc03g118995.1.1	1851	31.3751886591849	71.2646157954409	1.18356179555461	0.0106365417907548	Up	0.00313291908567708	NA	NA	NA	K03267//peptide chain release factor subunit 3	gi|723688364|ref|XP_010319085.1|//PREDICTED: LOW QUALITY PROTEIN: eukaryotic peptide chain release factor GTP-binding subunit ERF3A, partial [Solanum lycopersicum]
Solyc06g074090.3.1	1735	6367.23501331824	312.403005935937	-4.3491867745337	1.42280961543953e-16	Down	3.8450013836054e-18	GO:0044464//cell part	NA	NA	K00213//7-dehydrocholesterol reductase [EC:1.3.1.21]	gi|460391455|ref|XP_004241336.1|//PREDICTED: 7-dehydrocholesterol reductase [Solanum lycopersicum]
Solyc04g050140.3.1	2379	236.716093578128	1430.69668143987	2.59548814338908	1.30452050243061e-12	Up	5.90311573710585e-14	NA	NA	NA	K19525//vacuolar protein sorting-associated protein 13A/C;K13217//pre-mRNA-processing factor 39	gi|460383618|ref|XP_004237516.1|//PREDICTED: uncharacterized protein LOC101249631 [Solanum lycopersicum]
Solyc02g077575.1.1	1076	0.351236653820031	3.98081683326941	3.50254917875473	0.0415956955851701	Up	0.0150502988312676	NA	NA	NA	K08472//mlo protein	gi|565397459|ref|XP_006364311.1|//PREDICTED: MLO-like protein 12 [Solanum tuberosum]
Solyc02g089080.2.1	970	2036.80190173097	220.933625543735	-3.20462075629096	8.5388037831621e-07	Down	9.85711768169563e-08	NA	NA	NA	NA	gi|970007967|ref|XP_015064909.1|//PREDICTED: uncharacterized protein LOC107010182 [Solanum pennellii]
Solyc11g065630.2.1	2116	20.9914611082144	4.6685724786676	-2.16874920281632	0.0147663326378372	Down	0.00454581561263968	NA	NA	NA	K02981//small subunit ribosomal protein S2e	gi|460411944|ref|XP_004251364.1|//PREDICTED: calponin homology domain-containing protein DDB_G0272472 [Solanum lycopersicum]
Solyc12g009620.2.1	1820	418.559638749388	845.32977116004	1.01408105943117	0.00820054942278371	Up	0.0023347173285829	NA	NA	NA	NA	gi|460412685|ref|XP_004251728.1|//PREDICTED: uncharacterized protein LOC101260308 [Solanum lycopersicum]
Solyc03g019790.3.1	1631	604.062577159348	73.5943371286815	-3.03703134714882	2.70194125830492e-14	Down	9.64835144422288e-16	NA	GO:0015925//galactosidase activity;GO:0043167//ion binding	GO:0044238//primary metabolic process	K07407//alpha-galactosidase [EC:3.2.1.22]	gi|924183631|ref|NP_001233971.2|//alpha-galactosidase precursor [Solanum lycopersicum]
Solyc06g082600.3.1	991	1674.06702569468	4024.42392802536	1.26542499377547	3.24401715789459e-05	Up	5.13533183695793e-06	NA	GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0019787//ubiquitin-like protein transferase activity;GO:0016740//transferase activity	GO:0032446//protein modification by small protein conjugation;GO:0016567//protein ubiquitination	K06689//ubiquitin-conjugating enzyme E2 D [EC:2.3.2.23]	gi|350536447|ref|NP_001234247.1|//ubiquitin conjugating enzyme [Solanum lycopersicum]
Solyc03g033460.3.1	2717	217.86012567758	1117.31946364808	2.35856766640253	4.32985251515718e-07	Up	4.72236039188531e-08	NA	NA	NA	NA	gi|661894885|emb|CDP01884.1|//unnamed protein product [Coffea canephora];gi|723680139|ref|XP_010317692.1|//PREDICTED: oligopeptide transporter 7-like [Solanum lycopersicum]
Solyc07g063960.3.1	1415	11711.7123473883	3919.69920348572	-1.57913717325741	0.000124282394189512	Down	2.22104474424869e-05	GO:0030529//intracellular ribonucleoprotein complex;GO:0009536//plastid	GO:0003723//RNA binding;GO:0005198//structural molecule activity	GO:0010467//gene expression	K02895//large subunit ribosomal protein L24	gi|460397216|ref|XP_004244164.1|//PREDICTED: 50S ribosomal protein L24, chloroplastic [Solanum lycopersicum]
Solyc11g006420.2.1	4628	744.854052302007	228.010089350429	-1.70786010522195	0.000394139986634375	Down	7.91130098414383e-05	NA	NA	NA	K01081//5'-nucleotidase [EC:3.1.3.5]	gi|723740695|ref|XP_010312504.1|//PREDICTED: uncharacterized protein LOC101257721 [Solanum lycopersicum]
Solyc07g052290.1.1	1335	869.845679354178	129.808842157838	-2.74437081454305	2.88127762095186e-05	Down	4.50105654890757e-06	GO:0031224//intrinsic component of membrane	GO:0004175//endopeptidase activity	GO:0019538//protein metabolic process	NA	gi|460395813|ref|XP_004243475.1|//PREDICTED: uncharacterized protein LOC101255215 [Solanum lycopersicum]
Solyc12g008800.2.1	1402	1428.34454475216	16.2117446944916	-6.4611608566431	1.95267543265235e-14	Down	6.8478186551671e-16	NA	GO:0005488//binding	NA	K08869//aarF domain-containing kinase;K17613//calcineurin-binding protein cabin-1	gi|460412556|ref|XP_004251664.1|//PREDICTED: transcription factor MYB1R1 [Solanum lycopersicum]
Solyc01g111080.3.1	23222	199.125715710911	90.4362979759007	-1.13870570572841	0.00226557464307532	Down	0.00054798396671074	NA	NA	NA	K08176//MFS transporter, PHS family, inorganic phosphate transporter;K00660//chalcone synthase [EC:2.3.1.74]	gi|723666974|ref|XP_010315514.1|//PREDICTED: COBRA-like protein 1 [Solanum lycopersicum]
Solyc11g007810.2.1	892	383.92319025997	122.35526102802	-1.64974157076855	0.00445145968092424	Down	0.00117392564643429	NA	GO:0005488//binding	GO:0008152//metabolic process	NA	gi|460409180|ref|XP_004250017.1|//PREDICTED: uncharacterized protein LOC101258513 [Solanum lycopersicum]
Solyc08g041860.1.1	1167	4059.25784521298	10332.9815018938	1.34796870430903	0.00910837948638341	Up	0.00262984596322968	NA	NA	NA	NA	gi|460398805|ref|XP_004244942.1|//PREDICTED: uncharacterized protein LOC101261347 [Solanum lycopersicum]
Solyc04g078420.1.1	987	3163.78027974158	8628.92290190466	1.44753107736725	0.000384471978929318	Up	7.69438633459828e-05	NA	NA	NA	K09422//myb proto-oncogene protein, plant	gi|460384857|ref|XP_004238123.1|//PREDICTED: transcription factor MYB44-like [Solanum lycopersicum]
Solyc12g094450.2.1	1554	509.5104136494	1965.93834783492	1.94803454083643	1.98353822498015e-05	Up	2.99955814028049e-06	NA	GO:0016836//hydro-lyase activity	NA	K19658//peroxisomal enoyl-CoA hydratase 2 [EC:4.2.1.119]	gi|460415576|ref|XP_004253134.1|//PREDICTED: enoyl-CoA hydratase 2, peroxisomal [Solanum lycopersicum]
Solyc12g094380.2.1	1300	155.671192669215	24.2183741899423	-2.68432807145398	4.31119398165369e-05	Down	6.95659711740675e-06	NA	NA	NA	NA	gi|460415582|ref|XP_004253137.1|//PREDICTED: uncharacterized protein LOC101254074 [Solanum lycopersicum]
Solyc01g067210.3.1	1982	34.9879517438822	7.02663394648096	-2.31595256092575	0.00168783701182358	Down	0.000395284029569388	NA	NA	NA	K03347//cullin 1	gi|460366709|ref|XP_004229222.1|//PREDICTED: cullin-1-like [Solanum lycopersicum];gi|565351678|ref|XP_006342782.1|//PREDICTED: cullin-1-like [Solanum tuberosum]
Solyc06g073720.2.1	2948	3009.45662114477	6386.69506076437	1.08556654759693	0.0458747849207568	Up	0.016902946508934	GO:0043231//intracellular membrane-bounded organelle;GO:0005634//nucleus	GO:0003700//transcription factor activity, sequence-specific DNA binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0010467//gene expression;GO:0006355//regulation of transcription, DNA-templated	K14514//ethylene-insensitive protein 3	gi|350537235|ref|NP_001234541.1|//EIL1 protein [Solanum lycopersicum]
Solyc01g107020.3.1	1007	179.824104338971	0.494162655801205	-8.507384713697	6.29360100661083e-14	Down	2.36936671264237e-15	NA	NA	NA	NA	gi|460369692|ref|XP_004230691.1|//PREDICTED: uncharacterized protein LOC101263941 [Solanum lycopersicum]
Solyc10g005110.3.1	2352	5893.29294379377	2400.69567074762	-1.29562145257587	0.000150750074221105	Down	2.75393661010003e-05	GO:0009532//plastid stroma;GO:0005576//extracellular region	GO:0016634//oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor;GO:0042802//identical protein binding	GO:0006779//porphyrin-containing compound biosynthetic process	K00228//coproporphyrinogen III oxidase [EC:1.3.3.3]	gi|460405900|ref|XP_004248412.1|//PREDICTED: coproporphyrinogen-III oxidase 1, chloroplastic [Solanum lycopersicum]
Solyc11g072510.2.1	1543	581.587928667389	143.109151724439	-2.02288139095821	3.25909324195834e-07	Down	3.47192801756259e-08	GO:0005829//cytosol	GO:0045552//dihydrokaempferol 4-reductase activity;GO:0016616//oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;GO:0048037//cofactor binding;GO:0050662//coenzyme binding	GO:0008152//metabolic process;GO:0055114//oxidation-reduction process	K09753//cinnamoyl-CoA reductase [EC:1.2.1.44]	gi|460411759|ref|XP_004251273.1|//PREDICTED: cinnamoyl-CoA reductase 1 [Solanum lycopersicum];gi|228480464|gb|ACQ41893.1|//cinnamoyl-CoA reductase [Camellia oleifera]
Solyc03g117840.3.1	891	134.376917216055	753.146328209039	2.48664485378819	2.36619326580641e-18	Up	5.18608036489552e-20	NA	NA	NA	NA	gi|970019969|ref|XP_015071194.1|//PREDICTED: uncharacterized protein LOC107015442 [Solanum pennellii]
Solyc04g040090.3.1	1722	3.54682609629198	35.9773365016254	3.34248788334008	0.000100794224643746	Up	1.75877782548563e-05	NA	GO:0016843//amine-lyase activity	GO:0008152//metabolic process	K01757//strictosidine synthase [EC:4.3.3.2]	gi|460383237|ref|XP_004237337.1|//PREDICTED: strictosidine synthase 3-like [Solanum lycopersicum]
Solyc12g096560.2.1	2229	875.263408672705	2122.73144221539	1.27813269651644	0.00323812981852354	Up	0.000819550524369124	NA	NA	NA	K14641//apyrase [EC:3.6.1.5]	gi|460415399|ref|XP_004253046.1|//PREDICTED: probable apyrase 2 [Solanum lycopersicum]
Solyc02g063520.3.1	1239	234.033811554805	1440.6356501597	2.62191663058012	1.28691522567306e-07	Up	1.27933610663115e-08	NA	NA	NA	K09338//homeobox-leucine zipper protein	gi|723677434|ref|XP_010317182.1|//PREDICTED: homeobox-leucine zipper protein HAT22 [Solanum lycopersicum]
Solyc12g005920.2.1	2081	13.1796545075323	477.406733538998	5.17883445788506	8.09786050090362e-16	Up	2.36343550477394e-17	NA	NA	NA	K17275//plastin-1	gi|460412269|ref|XP_004251524.1|//PREDICTED: fimbrin-5 [Solanum lycopersicum];gi|970067477|ref|XP_015060831.1|//PREDICTED: fimbrin-5 [Solanum pennellii]
Solyc01g080790.3.1	922	32.1465532151683	673.351049471748	4.38862288174575	4.79217114595381e-06	Up	6.37693864285638e-07	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460367274|ref|XP_004229500.1|//PREDICTED: uncharacterized protein LOC101249206 [Solanum lycopersicum]
Solyc11g010300.2.1	2214	2005.19958327679	564.240177546748	-1.82936453550679	2.42213537550887e-13	Down	9.85899742826782e-15	NA	GO:0046914//transition metal ion binding;GO:0003933//GTP cyclohydrolase activity;GO:0016830//carbon-carbon lyase activity	GO:0006771//riboflavin metabolic process	K14652//3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]	gi|460409389|ref|XP_004250121.1|//PREDICTED: bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic-like [Solanum lycopersicum]
Solyc08g065480.3.1	3222	520.039817120069	5421.84069549801	3.38208873124409	8.27493335152384e-22	Up	1.28312668638509e-23	GO:0044424//intracellular part	GO:0016829//lyase activity	GO:0006779//porphyrin-containing compound biosynthetic process	K01772//ferrochelatase [EC:4.99.1.1]	gi|723722429|ref|XP_010325044.1|//PREDICTED: ferrochelatase-2, chloroplastic-like isoform X2 [Solanum lycopersicum];gi|460399169|ref|XP_004245114.1|//PREDICTED: ferrochelatase-2, chloroplastic-like isoform X1 [Solanum lycopersicum]
Solyc02g071380.2.1	1406	757.403572173536	40.0361268393743	-4.24168790812931	8.42714651652486e-13	Down	3.72229335846204e-14	NA	NA	NA	K05278//flavonol synthase [EC:1.14.11.23]	gi|460374415|ref|XP_004233006.1|//PREDICTED: protein SRG1-like [Solanum lycopersicum]
Solyc01g010480.3.1	4136	2408.70996039958	181.558355576222	-3.72975545335546	7.7884182716389e-07	Down	8.88056191029647e-08	NA	GO:0060089//molecular transducer activity	GO:0007165//signal transduction	K20715	gi|460365015|ref|XP_004228401.1|//PREDICTED: protein TWIN LOV 1-like isoform X1 [Solanum lycopersicum]
Solyc02g067600.1.1	755	29.5222183928695	2674.28514070045	6.50120835395388	1.19714699797262e-24	Up	1.39998077603407e-26	NA	NA	NA	NA	gi|971568008|ref|XP_015168763.1|//PREDICTED: neurofilament medium polypeptide [Solanum tuberosum]
Solyc07g042680.3.1	2204	2343.18463190709	5172.03327849259	1.14226092168208	0.00969590846864247	Up	0.00282405802795483	NA	NA	NA	K04424//sterile alpha motif and leucine zipper containing kinase AZK [EC:2.7.11.25];K17535//serine/threonine-protein kinase TNNI3K [EC:2.7.11.1];K04365//B-Raf proto-oncogene serine/threonine-protein kinase [EC:2.7.11.1]	gi|460396214|ref|XP_004243673.1|//PREDICTED: serine/threonine-protein kinase HT1-like [Solanum lycopersicum]
Solyc03g083460.3.1	1253	227.164513052701	1119.16133606869	2.30060864321111	0.00071890161083979	Up	0.000154107766659447	NA	NA	NA	K19041//E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27]	gi|460378379|ref|XP_004234950.1|//PREDICTED: RING-H2 finger protein ATL22-like [Solanum lycopersicum]
Solyc07g048060.2.1	516	34.2842083856852	949.856962106293	4.79209415976164	1.6327140325898e-14	Up	5.66593396578614e-16	GO:0031224//intrinsic component of membrane	NA	NA	NA	gi|460396616|ref|XP_004243867.1|//PREDICTED: cytochrome b561 and DOMON domain-containing protein At5g48750 [Solanum lycopersicum]
Solyc02g087060.3.1	2478	819.273864115487	163.675639144307	-2.32350617915907	0.00352254026290539	Down	0.000903218818716497	NA	NA	NA	K07874//Ras-related protein Rab-1A;K00801//farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21];K01623//fructose-bisphosphate aldolase, class I [EC:4.1.2.13]	gi|460372943|ref|XP_004232282.1|//PREDICTED: WAT1-related protein At3g28050-like [Solanum lycopersicum];gi|460372945|ref|XP_004232283.1|//PREDICTED: WAT1-related protein At5g40240-like [Solanum lycopersicum]
Solyc07g063590.3.1	5988	426.427495074439	133.936962510723	-1.67074630741357	0.01313539367818	Down	0.00397714338928942	NA	NA	NA	K10357//myosin V	gi|723718529|ref|XP_010324342.1|//PREDICTED: myosin-2-like isoform X1 [Solanum lycopersicum];gi|723718533|ref|XP_010324344.1|//PREDICTED: myosin-2-like isoform X2 [Solanum lycopersicum]
Solyc01g015000.3.1	923	0.375060885604127	10.0774401609912	4.747860591499	0.00159120895965315	Up	0.000370459637766273	NA	NA	GO:0019222//regulation of metabolic process;GO:0019740//nitrogen utilization	K09458//3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]	gi|723654462|ref|XP_010318392.1|//PREDICTED: nitrogen regulatory protein P-II homolog [Solanum lycopersicum]
Solyc03g114210.3.1	1459	582.647521388241	1642.77273569484	1.49543762969338	0.0124639796409635	Up	0.00374304454301049	NA	NA	NA	K14510//serine/threonine-protein kinase CTR1 [EC:2.7.11.1];K17535//serine/threonine-protein kinase TNNI3K [EC:2.7.11.1]	gi|460380742|ref|XP_004236113.1|//PREDICTED: serine/threonine-protein kinase HT1-like [Solanum lycopersicum]
Solyc07g040730.1.1	378	211.151387186749	561.770525718759	1.41170320776586	2.52156585949355e-06	Up	3.19754251304497e-07	NA	NA	NA	NA	gi|460396367|ref|XP_004243747.1|//PREDICTED: uncharacterized protein LOC101265147 [Solanum lycopersicum]
Solyc12g009790.2.1	2302	551.913712049514	1640.46880345683	1.57159352440625	6.2334892895488e-06	Up	8.50845932534476e-07	NA	NA	NA	K19907;K19938//rabphilin-3A	gi|460412695|ref|XP_004251733.1|//PREDICTED: synaptotagmin-5-like [Solanum lycopersicum]
Solyc10g008390.3.1	914	233.682476315394	607.071166538772	1.37731610106045	1.98370361164804e-05	Up	3.00054765769635e-06	NA	NA	NA	K03671//thioredoxin 1	gi|460405393|ref|XP_004248160.1|//PREDICTED: thioredoxin [Solanum lycopersicum]
Solyc08g006000.3.1	1005	1080.61552451759	2639.61227777731	1.2884727198577	1.74895000621561e-06	Up	2.15391785468033e-07	NA	NA	NA	NA	gi|460397805|ref|XP_004244457.1|//PREDICTED: uncharacterized protein LOC101255903 [Solanum lycopersicum]
Solyc10g079960.1.1	3334	3.87345556427478	41.340367469609	3.41585811827448	0.0047719616620814	Up	0.00126794141812323	NA	NA	NA	K13024//inositol-hexakisphosphate/diphosphoinositol-pentakisphosphate 1-kinase [EC:2.7.4.24];K13495//cis-zeatin O-glucosyltransferase [EC:2.4.1.215]	gi|723738387|ref|XP_010312115.1|//PREDICTED: zeatin O-xylosyltransferase-like isoform X2 [Solanum lycopersicum]
Solyc02g078670.3.1	3434	2429.25834344262	602.607799878878	-2.01122467214229	1.8840360161121e-05	Down	2.837149808071e-06	NA	NA	NA	K13172//serine/arginine repetitive matrix protein 2;K12472//epidermal growth factor receptor substrate 15;K02184//formin 2	gi|460374065|ref|XP_004232832.1|//PREDICTED: uncharacterized protein LOC101263075 [Solanum lycopersicum]
Solyc01g005000.3.1	1710	1718.73970648255	468.537425368913	-1.87511487749531	2.14897055554527e-06	Down	2.68421064992999e-07	NA	GO:0016831//carboxy-lyase activity;GO:0048037//cofactor binding	GO:0009064//glutamine family amino acid metabolic process	K01580//glutamate decarboxylase [EC:4.1.1.15]	gi|350538351|ref|NP_001233827.1|//glutamate decarboxylase isoform3 [Solanum lycopersicum]
Solyc03g094120.3.1	1458	38.8013764800914	591.157057693839	3.92936173623157	1.56368134914322e-06	Up	1.90873797279012e-07	NA	NA	NA	K20892	gi|723683229|ref|XP_010318206.1|//PREDICTED: uncharacterized protein At1g28695-like isoform X1 [Solanum lycopersicum]
Solyc08g036620.3.1	569	39.5836461582988	1991.71081039528	5.6529598688895	3.17016170285527e-14	Up	1.15212004632618e-15	NA	NA	NA	K13464//jasmonate ZIM domain-containing protein	gi|460398759|ref|XP_004244919.1|//PREDICTED: protein TIFY 5A-like [Solanum lycopersicum]
Solyc08g008480.3.1	1106	388.623039385215	17.1644543283133	-4.50087553443398	3.23322089131091e-09	Down	2.4730018148837e-10	NA	NA	NA	K09422//myb proto-oncogene protein, plant	gi|460398357|ref|XP_004244728.1|//PREDICTED: myb-related protein 315-like [Solanum lycopersicum]
Solyc02g067180.3.1	2154	8120.38184351781	3871.73600411317	-1.06856698342097	0.000945996984846331	Down	0.000209383110780435	GO:0009536//plastid	GO:0003824//catalytic activity;GO:0048037//cofactor binding	GO:0019752//carboxylic acid metabolic process	K01739//cystathionine gamma-synthase [EC:2.5.1.48]	gi|350536179|ref|NP_001234489.1|//cystathionine gamma synthase [Solanum lycopersicum]
Solyc01g066290.2.1	606	169.671806487904	796.2109884152	2.23040392262829	1.18270502564693e-05	Up	1.70122957133275e-06	NA	NA	NA	NA	NA
Solyc02g070630.3.1	1041	706.534673110142	1558.02614975694	1.14088718014669	0.000125221941378561	Up	2.24137379789716e-05	NA	NA	NA	K02882//large subunit ribosomal protein L18Ae	gi|970009440|ref|XP_015065599.1|//PREDICTED: 60S ribosomal protein L18a-like protein [Solanum pennellii]
Solyc04g080190.3.1	1213	1846.02607083789	894.724463096889	-1.04490756038976	5.09940662551731e-06	Down	6.84089922664262e-07	NA	NA	NA	NA	gi|460385106|ref|XP_004238246.1|//PREDICTED: outer envelope pore protein 24A, chloroplastic [Solanum lycopersicum]
Solyc08g014470.3.1	2613	1474.46679006646	537.166634321925	-1.45675172763188	0.00155590222970414	Down	0.000361543704337842	GO:0005783//endoplasmic reticulum;GO:0048471//perinuclear region of cytoplasm	GO:0016787//hydrolase activity;GO:0016810//hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	NA	K07047//uncharacterized protein;K20285//Rab9 effector protein with kelch motifs;K01880//glycyl-tRNA synthetase [EC:6.1.1.14]	gi|460398446|ref|XP_004244770.1|//PREDICTED: uncharacterized protein LOC101256311 [Solanum lycopersicum];gi|565368867|ref|XP_006351062.1|//PREDICTED: putative amidohydrolase YtcJ [Solanum tuberosum]
Solyc02g090110.3.1	2680	354.473534879786	5523.38066889347	3.96180173625094	6.58975998444698e-23	Up	9.13743370439196e-25	GO:0016021//integral component of membrane	GO:0004674//protein serine/threonine kinase activity;GO:0005524//ATP binding;GO:0016301//kinase activity	GO:0006468//protein phosphorylation	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|724601449|ref|NP_001234504.1|//wall-associated receptor kinase-like 14 precursor [Solanum lycopersicum]
Solyc01g073920.3.1	1504	336.068014268343	1094.34626419562	1.70324415243902	1.26904472114754e-05	Up	1.83724828423179e-06	NA	NA	NA	NA	gi|460366972|ref|XP_004229349.1|//PREDICTED: formin-like protein 7 [Solanum lycopersicum]
Solyc06g082570.2.1	2223	608.221024395733	18458.2856673672	4.92352907024933	1.222595393929e-80	Up	2.63638178567612e-84	NA	NA	NA	K09291//nucleoprotein TPR;K20478//golgin subfamily B member 1	gi|460393765|ref|XP_004242479.1|//PREDICTED: uncharacterized protein LOC101244780 [Solanum lycopersicum]
Solyc08g067410.2.1	2590	415.082302997658	2256.16277352112	2.44240182725255	2.76699774390097e-10	Up	1.78738895563605e-11	NA	NA	NA	K15397//3-ketoacyl-CoA synthase [EC:2.3.1.199]	gi|460399370|ref|XP_004245214.1|//PREDICTED: 3-ketoacyl-CoA synthase 11-like [Solanum lycopersicum]
Solyc11g044530.2.1	1115	1935.98046943842	443.46195748362	-2.12618214556479	3.36400371543626e-07	Down	3.60124447246643e-08	GO:0009536//plastid	NA	NA	K02952//small subunit ribosomal protein S13	gi|460410673|ref|XP_004250746.1|//PREDICTED: probable plastid-lipid-associated protein 4, chloroplastic [Solanum lycopersicum]
Solyc01g107100.3.1	657	38.1315692957417	115.420632927935	1.59784333622526	0.0224166997690875	Up	0.0073538606928485	NA	NA	NA	K15920//beta-D-xylosidase 4 [EC:3.2.1.37]	gi|970000015|ref|XP_015085950.1|//PREDICTED: uncharacterized protein LOC107029134 [Solanum pennellii]
Solyc10g079940.1.1	336	1.83321318150942	28.4777394784064	3.95738816230428	5.72157440795639e-05	Up	9.48192925964445e-06	NA	GO:0016758//transferase activity, transferring hexosyl groups	NA	K13495//cis-zeatin O-glucosyltransferase [EC:2.4.1.215]	gi|971557335|ref|XP_015165912.1|//PREDICTED: zeatin O-glucosyltransferase-like [Solanum tuberosum]
Solyc03g096670.3.1	1682	197.72534871275	2465.74865055355	3.64045600025426	1.65695220557562e-16	Up	4.49627704509861e-18	NA	GO:0004721//phosphoprotein phosphatase activity	NA	K14497//protein phosphatase 2C [EC:3.1.3.16]	gi|910749435|ref|NP_001234692.2|//protein phosphatase 2C AHG3 homolog [Solanum lycopersicum]
Solyc05g016310.1.1	1581	84.8825997335097	1437.19261200611	4.08164077103657	1.03875809249389e-09	Up	7.37987522101292e-11	NA	GO:0004175//endopeptidase activity	GO:0019538//protein metabolic process	K00924;K02882//large subunit ribosomal protein L18Ae;K01381//saccharopepsin [EC:3.4.23.25]	gi|460387153|ref|XP_004239252.1|//PREDICTED: aspartic proteinase nepenthesin-1-like [Solanum lycopersicum]
Solyc11g065240.2.1	1662	1436.66406688475	391.978939204713	-1.87387471151112	3.26100500528607e-09	Down	2.49789968907965e-10	NA	NA	NA	NA	gi|460411021|ref|XP_004250913.1|//PREDICTED: uncharacterized protein LOC101266790 [Solanum lycopersicum]
Solyc12g013580.2.1	2365	2619.36491833922	5389.19180595268	1.040851870809	0.000887168130753339	Up	0.000194907147855233	NA	NA	NA	NA	gi|460412928|ref|XP_004251848.1|//PREDICTED: peptidyl-prolyl cis-trans isomerase CYP37, chloroplastic isoform X2 [Solanum lycopersicum];gi|723748466|ref|XP_010313888.1|//PREDICTED: peptidyl-prolyl cis-trans isomerase CYP37, chloroplastic isoform X3 [Solanum lycopersicum]
Solyc09g083105.1.1	3985	419.655021124672	197.835621130956	-1.08490162983415	0.00127816766019737	Down	0.000290622585627104	GO:0009507//chloroplast	NA	GO:0006886//intracellular protein transport;GO:0016192//vesicle-mediated transport	K01303//acylaminoacyl-peptidase [EC:3.4.19.1];K17710//pentatricopeptide repeat domain-containing protein 1	gi|460404429|ref|XP_004247685.1|//PREDICTED: pentatricopeptide repeat-containing protein At3g23020 [Solanum lycopersicum];gi|697183824|ref|XP_009600933.1|//PREDICTED: acylamino-acid-releasing enzyme-like [Nicotiana tomentosiformis]
Solyc11g065020.2.1	1647	146.679832160799	403.068311535711	1.45835384535472	0.00708311664840124	Up	0.00198357892423731	GO:0016020//membrane	NA	NA	K15356//GDP-mannose transporter	gi|460410997|ref|XP_004250901.1|//PREDICTED: GDP-mannose transporter GONST1 isoform X1 [Solanum lycopersicum];gi|723744733|ref|XP_010313248.1|//PREDICTED: GDP-mannose transporter GONST1 isoform X2 [Solanum lycopersicum];gi|296088545|emb|CBI37536.3|//unnamed protein product [Vitis vinifera]
Solyc07g052590.1.1	2025	181.865703944837	26.9894249870475	-2.75240736117711	0.000192152934851782	Down	3.60268846840787e-05	NA	NA	NA	K00026//malate dehydrogenase [EC:1.1.1.37]	gi|460395774|ref|XP_004243456.1|//PREDICTED: pentatricopeptide repeat-containing protein At1g71460, chloroplastic [Solanum lycopersicum]
Solyc01g091200.3.1	2509	546.871186482917	181.772985499351	-1.58906324457718	0.000545123950677697	Down	0.000113401549453266	NA	NA	NA	K08679//UDP-glucuronate 4-epimerase [EC:5.1.3.6]	gi|460367892|ref|XP_004229804.1|//PREDICTED: UDP-glucuronate 4-epimerase 3 [Solanum lycopersicum];gi|661899705|emb|CDO97699.1|//unnamed protein product [Coffea canephora]
Solyc04g017620.3.1	3680	860.441160351744	2178.342460907	1.34008233564768	0.000244620190088734	Up	4.6876114404584e-05	NA	GO:0005524//ATP binding;GO:0016308//1-phosphatidylinositol-4-phosphate 5-kinase activity	GO:0046854//phosphatidylinositol phosphorylation	K00889//1-phosphatidylinositol-4-phosphate 5-kinase [EC:2.7.1.68]	gi|970065919|ref|XP_015059926.1|//PREDICTED: putative F-box protein At1g65770 [Solanum pennellii];gi|723688650|ref|XP_010319145.1|//PREDICTED: phosphatidylinositol 4-phosphate 5-kinase 9-like isoform X1 [Solanum lycopersicum]
Solyc02g072470.3.1	4099	132.771545897582	453.846487686902	1.7732583947828	0.0308211040158507	Up	0.010618736559509	NA	NA	NA	K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|723675191|ref|XP_010316829.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Solanum lycopersicum]
Solyc12g049520.2.1	5567	391.440529479295	56.3462230143892	-2.7964023269501	0.000396647644068335	Down	7.96902788701479e-05	NA	NA	NA	K11294//nucleolin;K02184//formin 2	gi|723751698|ref|XP_010314456.1|//PREDICTED: uncharacterized protein LOC101267294 [Solanum lycopersicum]
Solyc12g008950.2.1	971	43.5140557143008	149.914018737516	1.78458190446946	0.000993311208016453	Up	0.000220558925978605	NA	NA	NA	NA	gi|723747738|ref|XP_010313758.1|//PREDICTED: uncharacterized protein LOC104644831, partial [Solanum lycopersicum]
Solyc03g114840.3.1	1349	25.036313261445	102.923070587833	2.03947236589405	0.000462304815264931	Up	9.4427037821078e-05	GO:0043231//intracellular membrane-bounded organelle;GO:0005634//nucleus	GO:0003677//DNA binding;GO:0003700//transcription factor activity, sequence-specific DNA binding;GO:0001071//nucleic acid binding transcription factor activity;GO:0046983//protein dimerization activity	GO:0006355//regulation of transcription, DNA-templated;GO:0006351//transcription, DNA-templated	K09264//MADS-box transcription factor, plant;K09260//MADS-box transcription enhancer factor 2A	gi|723684471|ref|XP_010318407.1|//PREDICTED: MADS-box protein 1 isoform X1 [Solanum lycopersicum];gi|350539201|ref|NP_001234380.1|//MADS-box protein 1 [Solanum lycopersicum]
Solyc03g025330.3.1	1122	20.9102633768812	159.343950596202	2.92986111031217	8.74007174116334e-11	Up	5.2287964606259e-12	NA	NA	NA	NA	gi|723679773|ref|XP_004234461.2|//PREDICTED: UPF0496 protein At3g49070-like [Solanum lycopersicum]
Solyc03g112240.1.1	396	14.5387096499242	2.73076218854249	-2.41252364583882	0.0426583964874818	Down	0.015514312454464	NA	NA	NA	K03327//multidrug resistance protein, MATE family	gi|723688450|ref|XP_010319107.1|//PREDICTED: uncharacterized protein LOC104646649 [Solanum lycopersicum]
Solyc06g034370.1.1	579	28.0367099495586	1630.07155443235	5.86147442290535	5.82603820870581e-65	Up	3.04027638742662e-68	NA	GO:0030234//enzyme regulator activity	NA	K01051//pectinesterase [EC:3.1.1.11]	gi|460390256|ref|XP_004240754.1|//PREDICTED: 21 kDa protein-like [Solanum lycopersicum]
Solyc01g107800.3.1	980	573.33790100025	1246.0800592106	1.11993920492559	0.023394952222742	Up	0.00772535715451286	NA	NA	NA	K18801//glucuronoxylan 4-O-methyltransferase [EC:2.1.1.112]	gi|460369819|ref|XP_004230754.1|//PREDICTED: protein IRX15-LIKE-like [Solanum lycopersicum]
BGI_novel_G000354	937	440.320904148238	2513.05341729432	2.51281409469684	0.00139655089943382	Up	0.000320350910806461	NA	NA	NA	NA	gi|697174968|ref|XP_009596420.1|//PREDICTED: uncharacterized protein LOC104092512 [Nicotiana tomentosiformis]
Solyc06g082920.3.1	3668	2188.06203513844	10640.2946739549	2.28181255902275	6.72209264930886e-06	Up	9.24074761094792e-07	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460393708|ref|XP_004242451.1|//PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 [Solanum lycopersicum]
Solyc04g081570.3.1	2955	3614.45078791674	40327.3209085509	3.47990921250506	3.3116306259772e-18	Up	7.35698469167441e-20	GO:0044432//endoplasmic reticulum part	GO:0005515//protein binding;GO:0032559//adenyl ribonucleotide binding	GO:0044267//cellular protein metabolic process;GO:0050896//response to stimulus	K09487//heat shock protein 90kDa beta	gi|460385352|ref|XP_004238368.1|//PREDICTED: endoplasmin homolog [Solanum lycopersicum]
Solyc10g085080.2.1	1272	671.742896610689	62.0571805755189	-3.4362391024903	3.27571256526356e-07	Down	3.49451668472652e-08	NA	NA	NA	NA	gi|723739562|ref|XP_010312302.1|//PREDICTED: uncharacterized protein LOC101248439 [Solanum lycopersicum];gi|970058570|ref|XP_015055990.1|//PREDICTED: uncharacterized protein LOC107002466 [Solanum pennellii]
Solyc10g086120.2.1	935	297.787662017037	132.527789780891	-1.16798907076856	0.000204872963016747	Down	3.86485040192246e-05	NA	NA	NA	NA	gi|460408489|ref|XP_004249677.1|//PREDICTED: CASP-like protein 5A1 [Solanum lycopersicum]
Solyc06g053480.3.1	1698	6584.04963933948	1850.84151286298	-1.83079384990835	1.12855824064933e-15	Down	3.36952121201772e-17	GO:0009536//plastid	GO:0046872//metal ion binding;GO:0016717//oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	GO:0006631//fatty acid metabolic process	K03921//acyl-[acyl-carrier-protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]	gi|460390777|ref|XP_004241001.1|//PREDICTED: acyl-[acyl-carrier-protein] desaturase, chloroplastic [Solanum lycopersicum]
Solyc06g065670.3.1	5186	375.510421295903	48.906946076865	-2.94074166086321	1.01291293182386e-09	Down	7.18151486755816e-11	GO:0044464//cell part	GO:0032559//adenyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity	GO:0009207//purine ribonucleoside triphosphate catabolic process	K05681//ATP-binding cassette, subfamily G (WHITE), member 2	gi|565374207|ref|XP_006353655.1|//PREDICTED: ABC transporter G family member 32 [Solanum tuberosum];gi|970036174|ref|XP_015079414.1|//PREDICTED: ABC transporter G family member 32-like [Solanum pennellii];gi|723709573|ref|XP_010322739.1|//PREDICTED: ABC transporter G family member 32-like [Solanum lycopersicum]
Solyc08g067500.1.1	372	13.1274682841527	1.22985741681671	-3.41602573821499	0.0175068027250717	Down	0.0055154128758128	NA	NA	NA	NA	gi|460399384|ref|XP_004245221.1|//PREDICTED: non-specific lipid-transfer protein 1-like [Solanum lycopersicum]
Solyc04g081320.3.1	1022	4170.57355790411	682.290496334715	-2.61178777770638	4.8468987867074e-12	Down	2.38659359521413e-13	GO:0009535//chloroplast thylakoid membrane;GO:0016021//integral component of membrane;GO:0009570//chloroplast stroma	GO:0051082//unfolded protein binding;GO:0031072//heat shock protein binding;GO:0003756//protein disulfide isomerase activity	GO:0010206//photosystem II repair;GO:0006457//protein folding	NA	gi|999808927|ref|NP_001307325.1|//protein SPA, chloroplastic [Solanum lycopersicum];gi|460385314|ref|XP_004238349.1|//PREDICTED: uncharacterized protein LOC101260226 [Solanum lycopersicum]
Solyc05g008120.3.1	3562	27.8139993085262	363.163253193554	3.70673512400261	2.04048030438098e-17	Up	5.04263620771056e-19	NA	NA	NA	K09510//DnaJ homolog subfamily B member 4;K09512//DnaJ homolog subfamily B member 6;K09514//DnaJ homolog subfamily B member 8	gi|460386310|ref|XP_004238842.1|//PREDICTED: uncharacterized protein LOC101254087 [Solanum lycopersicum]
Solyc01g007990.3.1	2422	780.096993715641	3006.21663151192	1.94622355691835	0.00522346100425424	Up	0.00140321617182273	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460365322|ref|XP_004228552.1|//PREDICTED: cysteine-rich receptor-like protein kinase 2 [Solanum lycopersicum]
Solyc01g098570.2.1	1174	196.783170049089	6.81823856722257	-4.85106394908186	2.77942649664698e-22	Down	4.08190711077572e-24	NA	NA	NA	K13161//heterogeneous nuclear ribonucleoprotein R;K20642	gi|460368618|ref|XP_004230162.1|//PREDICTED: protein FANTASTIC FOUR 3 [Solanum lycopersicum]
Solyc01g109920.2.1	1091	3.67701652965364	23.7291376857866	2.6900521069506	0.0125367772404791	Up	0.00377112689468713	NA	NA	GO:0009628//response to abiotic stimulus	NA	gi|460370182|ref|XP_004230933.1|//PREDICTED: embryogenic cell protein 40 [Solanum lycopersicum]
Solyc12g098350.1.1	865	2791.47273161774	546.66454880178	-2.35229873837775	3.60781957390135e-10	Down	2.38835826869271e-11	GO:0009536//plastid;GO:0009507//chloroplast	GO:0008135//translation factor activity, RNA binding;GO:0003743//translation initiation factor activity	GO:0006413//translational initiation;GO:0006412//translation	K02518//translation initiation factor IF-1	gi|350537915|ref|NP_001234573.1|//translation initiation factor IF-1, chloroplastic [Solanum lycopersicum]
Solyc01g096070.3.1	2571	2213.23680316934	5096.11501448174	1.20324001903744	0.0196438255751271	Up	0.00630220239803051	NA	NA	NA	K14486//auxin response factor	gi|723661609|ref|XP_010327130.1|//PREDICTED: auxin response factor 18 [Solanum lycopersicum]
Solyc04g011580.3.1	4499	441.50347628538	153.104457230856	-1.52790851363502	0.000698504320293433	Down	0.000149318707204519	NA	GO:0005488//binding	NA	K17943//pumilio RNA-binding family	gi|460382018|ref|XP_004236737.1|//PREDICTED: pumilio homolog 1-like [Solanum lycopersicum]
Solyc02g083000.1.1	858	0.717334917107266	7.03930182677111	3.29471358389031	0.027982945390845	Up	0.00950218549689123	NA	NA	NA	NA	gi|460375925|ref|XP_004233753.1|//PREDICTED: uncharacterized protein LOC101243667 [Solanum lycopersicum]
Solyc11g008810.2.1	3186	235.939010691063	84.5537418121875	-1.48047347107904	0.0227295097905224	Down	0.007472576276741	GO:0009505//plant-type cell wall;GO:0005886//plasma membrane	GO:0004563//beta-N-acetylhexosaminidase activity	GO:0005975//carbohydrate metabolic process	K12373//hexosaminidase [EC:3.2.1.52]	gi|460409323|ref|XP_004250088.1|//PREDICTED: beta-hexosaminidase 3 [Solanum lycopersicum]
Solyc09g057630.3.1	1836	285.567583593648	1865.09186409899	2.70734256617516	6.14727783803852e-11	Up	3.60890211529397e-12	NA	GO:0043167//ion binding;GO:0016798//hydrolase activity, acting on glycosyl bonds	GO:0044238//primary metabolic process	K19892//glucan endo-1,3-beta-glucosidase 4 [EC:3.2.1.39];K19891//glucan endo-1,3-beta-glucosidase 1/2/3 [EC:3.2.1.39]	gi|460403105|ref|XP_004247041.1|//PREDICTED: probable glucan endo-1,3-beta-glucosidase A6 [Solanum lycopersicum]
Solyc02g093430.3.1	2514	3145.66266194783	1084.77901228897	-1.5359627943397	0.00102969523413967	Down	0.000229328650066518	NA	NA	NA	K00737//beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase [EC:2.4.1.144]	gi|697116151|ref|XP_009611993.1|//PREDICTED: beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase-like isoform X2 [Nicotiana tomentosiformis];gi|460372038|ref|XP_004231841.1|//PREDICTED: uncharacterized protein LOC101260885 isoform X1 [Solanum lycopersicum]
Solyc02g080570.3.1	5629	2898.3827571555	663.313145084945	-2.12748610654264	3.42566574554594e-07	Down	3.67747030981524e-08	GO:0009536//plastid	GO:0046527//glucosyltransferase activity	GO:0005977//glycogen metabolic process;GO:0005982//starch metabolic process	K00703//starch synthase [EC:2.4.1.21]	gi|350538959|ref|NP_001234623.1|//starch synthase III [Solanum lycopersicum]
Solyc07g008000.3.1	2268	349.318773968123	1090.92734330728	1.64293893326475	0.00024288237339324	Up	4.64621587496298e-05	GO:0044464//cell part	NA	NA	K20168//TBC1 domain family member 15	gi|723712765|ref|XP_010323291.1|//PREDICTED: GTPase-activating protein gyp7 [Solanum lycopersicum]
Solyc03g123870.3.1	6575	1400.4556005832	3645.773159124	1.38032855375944	0.00162452135400021	Up	0.000379305269176135	NA	NA	NA	K19986//exocyst complex component 8;K17422//large subunit ribosomal protein L41;K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|460379521|ref|XP_004235510.1|//PREDICTED: exocyst complex component EXO84B [Solanum lycopersicum];gi|460379523|ref|XP_004235511.1|//PREDICTED: receptor-like protein kinase [Solanum lycopersicum]
Solyc06g069665.1.1	11660	110.536627794417	324.609295968469	1.55417981032801	2.944957591369e-05	Up	4.61261063028647e-06	NA	NA	NA	K12127//pseudo-response regulator 1;K02184//formin 2	gi|698488218|ref|XP_009790719.1|//PREDICTED: formin-like protein 20 [Nicotiana sylvestris];gi|460393152|ref|XP_004242175.1|//PREDICTED: two-component response regulator-like APRR1 isoform X1 [Solanum lycopersicum];gi|694422604|ref|XP_009339131.1|//PREDICTED: formin-like protein 20 isoform X1 [Pyrus x bretschneideri]
Solyc12g005900.2.1	2414	127.357357738336	421.444508308794	1.72646037374509	5.08873516990983e-07	Up	5.6107345432359e-08	NA	NA	NA	K10990//RecQ-mediated genome instability protein 1	gi|460413316|ref|XP_004252036.1|//PREDICTED: recQ-mediated genome instability protein 1-like isoform X1 [Solanum lycopersicum]
Solyc06g084380.3.1	1985	175.330623369366	60.2839435412477	-1.54023229959427	0.0018613980473842	Down	0.000441620641553616	NA	NA	NA	K10767//alkylated DNA repair protein alkB homolog 5 [EC:1.14.11.-]	gi|723711123|ref|XP_010323031.1|//PREDICTED: uncharacterized protein LOC101258968 [Solanum lycopersicum]
Solyc02g077370.1.1	486	101.690018638265	1594.30542843442	3.97067805570164	4.2390265188956e-11	Up	2.41909557195063e-12	GO:0043231//intracellular membrane-bounded organelle	GO:0001071//nucleic acid binding transcription factor activity;GO:0003676//nucleic acid binding	GO:0006950//response to stress;GO:0006351//transcription, DNA-templated	K13433//pathogenesis-related genes transcriptional activator PTI5;K14516//ethylene-responsive transcription factor 1	gi|350539681|ref|NP_001233987.1|//pathogenesis-related genes transcriptional activator PTI5 [Solanum lycopersicum]
Solyc04g050440.3.1	1797	985.628474501539	74.4490611994528	-3.72671837395681	2.86619300652195e-15	Down	8.89942885952282e-17	GO:0031224//intrinsic component of membrane	GO:0015101//organic cation transmembrane transporter activity	GO:0015696//ammonium transport	K03320//ammonium transporter, Amt family	gi|806638727|ref|NP_001234253.2|//ammonium transporter 1 member 2 [Solanum lycopersicum]
Solyc06g061030.3.1	2631	1009.04476505372	318.010437674136	-1.66584415604547	1.93081883703549e-07	Down	1.97918286933338e-08	GO:0005634//nucleus	GO:0003677//DNA binding	GO:0000160//phosphorelay signal transduction system;GO:0006355//regulation of transcription, DNA-templated	K14491//two-component response regulator ARR-B family	gi|460392751|ref|XP_004241977.1|//PREDICTED: two-component response regulator-like APRR2 [Solanum lycopersicum]
Solyc02g067740.3.1	1942	436.852672023398	195.88838457735	-1.1571149608748	9.36978128090179e-05	Down	1.62542724322786e-05	NA	NA	NA	NA	gi|460375070|ref|XP_004233331.1|//PREDICTED: uncharacterized protein LOC101258818 [Solanum lycopersicum]
Solyc05g052410.2.1	1883	19.7288381224274	167.450049804706	3.08535290516631	5.66154917279785e-06	Up	7.66043816059944e-07	GO:0005634//nucleus	GO:0003677//DNA binding;GO:0003700//transcription factor activity, sequence-specific DNA binding	GO:0006355//regulation of transcription, DNA-templated	K09286//EREBP-like factor	gi|460388602|ref|XP_004239956.1|//PREDICTED: dehydration-responsive element-binding protein 2A-like [Solanum lycopersicum]
Solyc08g008050.3.1	1123	28.0183768580706	4.73579620217039	-2.56469447772678	0.00920837239162123	Down	0.00266182316017982	GO:0031224//intrinsic component of membrane	NA	GO:0006810//transport	K09872//aquaporin PIP	gi|726965346|ref|NP_001289835.1|//probable aquaporin PIP-type pTOM75 [Solanum lycopersicum]
Solyc02g087550.3.1	2255	726.197097522224	1578.677587113	1.12028349099962	0.000454631293604547	Up	9.2712382857853e-05	GO:0044464//cell part	GO:0008194//UDP-glycosyltransferase activity	NA	K20891	gi|460372877|ref|XP_004232249.1|//PREDICTED: xylosyltransferase 1-like [Solanum lycopersicum]
Solyc01g007010.2.1	1360	555.631212073549	3379.48502668931	2.60460387345534	3.60846168035401e-06	Up	4.69820957562119e-07	GO:0043234//protein complex	GO:0019787//ubiquitin-like protein transferase activity	GO:0032446//protein modification by small protein conjugation	K10260//F-box and WD-40 domain protein 7;K08332//vacuolar protein 8	gi|460365604|ref|XP_004228691.1|//PREDICTED: E3 ubiquitin-protein ligase PUB22-like [Solanum lycopersicum]
Solyc03g121620.1.1	804	469.682297330417	2273.65272523318	2.27525479218749	3.8350373582808e-08	Up	3.46651468384931e-09	NA	NA	NA	NA	gi|460379694|ref|XP_004235596.1|//PREDICTED: protein YLS9 [Solanum lycopersicum]
Solyc07g040890.1.1	999	108.009474156441	405.018656379967	1.90683049906674	0.0462508961794836	Up	0.0170794553619407	NA	NA	NA	K14493//gibberellin receptor GID1 [EC:3.-.-.-]	gi|723717055|ref|XP_010324041.1|//PREDICTED: probable carboxylesterase 120 [Solanum lycopersicum]
Solyc07g025510.3.1	1358	292.445200582258	123.983934619662	-1.23801311908595	0.000574217532615267	Down	0.000120283885665983	GO:0016020//membrane	NA	NA	K17345//tetraspanin-5;K17294	gi|460394770|ref|XP_004242965.1|//PREDICTED: tetraspanin-2-like [Solanum lycopersicum]
Solyc01g091600.3.1	2965	548.75380569804	1957.50504906496	1.83478508359454	4.02232350814004e-08	Up	3.65229613308079e-09	NA	NA	NA	K13148//integrator complex subunit 11 [EC:3.1.27.-]	gi|460367948|ref|XP_004229832.1|//PREDICTED: E3 ubiquitin-protein ligase At1g12760 [Solanum lycopersicum]
Solyc11g012500.2.1	5162	365.181123435595	1463.65729314858	2.00289369643644	0.00289382268604344	Up	0.000722377013882248	NA	NA	NA	K14494//DELLA protein	gi|697142383|ref|XP_009625296.1|//PREDICTED: scarecrow-like protein 13 [Nicotiana tomentosiformis];gi|723742196|ref|XP_010312749.1|//PREDICTED: uncharacterized protein LOC104644490 [Solanum lycopersicum]
Solyc04g077740.1.1	1083	20.10431965558	111.935691696654	2.4770927056352	9.07466963386273e-07	Up	1.05366020238118e-07	NA	NA	NA	K14548//U3 small nucleolar RNA-associated protein 4	gi|460384774|ref|XP_004238084.1|//PREDICTED: uncharacterized protein LOC101256871 [Solanum lycopersicum]
Solyc04g057980.3.1	829	6630.02526076739	509.379146032388	-3.702202565057	2.23957170001545e-08	Down	1.94088422638136e-09	GO:0009579//thylakoid;GO:0009507//chloroplast	GO:0016491//oxidoreductase activity	NA	NA	gi|460383290|ref|XP_004237361.1|//PREDICTED: NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Solanum lycopersicum]
BGI_novel_G000275	1683	104.22195461149	19.3882014739265	-2.42640833221529	0.00107259902136757	Down	0.000240123368209841	NA	NA	NA	NA	NA
Solyc01g005540.3.1	2236	1557.7447321232	293.450927469511	-2.40826766514198	1.69652377219852e-10	Down	1.0649120442755e-11	GO:0044424//intracellular part	GO:0046872//metal ion binding;GO:0032559//adenyl ribonucleotide binding;GO:0004812//aminoacyl-tRNA ligase activity	GO:0006418//tRNA aminoacylation for protein translation	K04567//lysyl-tRNA synthetase, class II [EC:6.1.1.6]	gi|460365437|ref|XP_004228608.1|//PREDICTED: probable lysine--tRNA ligase, cytoplasmic [Solanum lycopersicum]
Solyc12g014150.2.1	2559	877.203378476603	204.405114305093	-2.10148007485725	8.34429840852676e-14	Down	3.20671375398505e-15	NA	NA	NA	NA	gi|460413003|ref|XP_004251885.1|//PREDICTED: uncharacterized protein ycf45 [Solanum lycopersicum]
Solyc02g084650.3.1	864	272.769018147649	1979.51153020963	2.85939277724171	7.46452422858396e-06	Up	1.03726503370214e-06	NA	NA	NA	NA	gi|460373286|ref|XP_004232452.1|//PREDICTED: uncharacterized protein LOC101247385 [Solanum lycopersicum]
Solyc08g066950.3.1	2848	665.277817700499	191.482522598433	-1.79674421345085	3.80464417276894e-13	Down	1.59259557403441e-14	NA	GO:0016744//transferase activity, transferring aldehyde or ketonic groups	GO:0006721//terpenoid metabolic process;GO:0006772//thiamine metabolic process	K01662//1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]	gi|460399313|ref|XP_004245186.1|//PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase, chloroplastic [Solanum lycopersicum]
Solyc07g055560.3.1	2415	1445.51819868044	21.5988687275503	-6.0644872107443	5.47322457245662e-14	Down	2.05235720884574e-15	NA	GO:0005506//iron ion binding;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K07428//cytochrome P450, family 4, subfamily X [EC:1.14.14.1];K07426//cytochrome P450, family 4, subfamily B, polypeptide 1 [EC:1.14.14.1]	gi|460395362|ref|XP_004243253.1|//PREDICTED: cytochrome P450 CYP72A219 [Solanum lycopersicum]
BGI_novel_G000025	725	84.4145656892139	1.20673466653454	-6.12831155638974	7.1060306885152e-10	Down	4.93194764500347e-11	NA	NA	NA	K18195//rhamnogalacturonan endolyase [EC:4.2.2.23]	gi|970046472|ref|XP_015084745.1|//PREDICTED: uncharacterized protein LOC107028215 [Solanum pennellii]
Solyc08g082170.3.1	1847	2013.5018577017	646.562748083896	-1.63884450970439	8.27996678024373e-07	Down	9.51819649257182e-08	GO:0005576//extracellular region	GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0047911//galacturan 1,4-alpha-galacturonidase activity;GO:0004650//polygalacturonase activity	GO:0044238//primary metabolic process;GO:0005975//carbohydrate metabolic process;GO:0045229//external encapsulating structure organization;GO:0071555//cell wall organization	K01184//polygalacturonase [EC:3.2.1.15]	gi|970047090|ref|XP_015085058.1|//PREDICTED: probable polygalacturonase isoform X3 [Solanum pennellii];gi|661884228|emb|CDP12145.1|//unnamed protein product [Coffea canephora]
Solyc03g121470.3.1	8319	378.209058655129	1419.95431099234	1.90858868630305	4.76288773492941e-13	Up	2.01146257778255e-14	GO:0044464//cell part	GO:0004620//phospholipase activity;GO:0046872//metal ion binding	GO:0006650//glycerophospholipid metabolic process	K01115//phospholipase D1/2 [EC:3.1.4.4]	gi|460379714|ref|XP_004235606.1|//PREDICTED: phospholipase D epsilon [Solanum lycopersicum]
Solyc02g092800.3.1	1888	3238.74255546463	245.852632489731	-3.71956808610336	8.87409221437057e-12	Down	4.53164840229897e-13	GO:0044464//cell part	NA	GO:0051234//establishment of localization	K12347//natural resistance-associated macrophage protein	gi|970010537|ref|XP_015066162.1|//PREDICTED: metal transporter Nramp3-like [Solanum pennellii]
Solyc05g018610.2.1	1755	734.506272153265	1543.94852889316	1.07177794229995	0.0207881905137276	Up	0.00673516296202925	NA	NA	NA	K09518//DnaJ homolog subfamily B member 12	gi|460387220|ref|XP_004239284.1|//PREDICTED: chaperone protein dnaJ 49-like [Solanum lycopersicum]
Solyc08g014570.3.1	2758	516.536735422443	2167.74610296564	2.06925293063056	0.0013990637800833	Up	0.000321188080420943	NA	NA	NA	K15502//serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A;K06694//26S proteasome non-ATPase regulatory subunit 10	gi|460398454|ref|XP_004244774.1|//PREDICTED: ankyrin repeat-containing protein At5g02620 [Solanum lycopersicum]
Solyc11g012360.2.1	1972	3938.55981302291	111.670231290608	-5.1403516324612	1.82446828640974e-18	Down	3.95795639887607e-20	GO:0044464//cell part	NA	GO:0030001//metal ion transport	K14445//solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 2/3/5	gi|525314462|ref|NP_001266027.1|//tonoplast dicarboxylate transporter-like [Solanum lycopersicum]
Solyc06g082060.3.1	2826	250.275879481037	17.2481634405047	-3.85900459784748	2.80476616428862e-12	Down	1.33308797493584e-13	NA	NA	NA	NA	gi|970036262|ref|XP_015079461.1|//PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC107023319 [Solanum pennellii];gi|723711833|ref|XP_010323136.1|//PREDICTED: uncharacterized protein LOC101245266 [Solanum lycopersicum]
Solyc01g091360.3.1	2041	806.078542982107	1944.35798574407	1.27030154082647	0.00187861235876591	Up	0.000445844822135924	NA	NA	NA	NA	gi|460367916|ref|XP_004229816.1|//PREDICTED: uncharacterized protein LOC101253424 [Solanum lycopersicum]
Solyc08g082920.3.1	1089	329.53649412112	850.128657824298	1.36724295054238	8.22933861391781e-05	Up	1.40918374803707e-05	GO:0031224//intrinsic component of membrane	NA	NA	NA	gi|460399898|ref|XP_004245473.1|//PREDICTED: ORM1-like protein 3 [Solanum lycopersicum]
Solyc08g062610.3.1	1953	1402.28115380225	467.451310798485	-1.58488762658438	3.27389654357061e-05	Down	5.19127623987975e-06	GO:0005774//vacuolar membrane;GO:0005768//endosome;GO:0005802//trans-Golgi network	GO:0008757//S-adenosylmethionine-dependent methyltransferase activity	GO:0032259//methylation;GO:0006629//lipid metabolic process;GO:0008610//lipid biosynthetic process	K13384//(S)-coclaurine N-methyltransferase [EC:2.1.1.140]	gi|971557815|ref|XP_015166033.1|//PREDICTED: (S)-coclaurine N-methyltransferase-like [Solanum tuberosum];gi|970047804|ref|XP_015085437.1|//PREDICTED: (S)-coclaurine N-methyltransferase-like isoform X1 [Solanum pennellii]
Solyc02g079940.3.1	2299	46.6044712429558	9.96725134288119	-2.22520075971334	0.000155220505395484	Down	2.85238218130213e-05	NA	NA	NA	K08901//photosystem II oxygen-evolving enhancer protein 3	gi|460373912|ref|XP_004232756.1|//PREDICTED: uncharacterized protein LOC101266181 [Solanum lycopersicum]
Solyc06g050440.3.1	1247	201.239178472609	47.4935866915825	-2.08310658815083	0.0221254464747452	Down	0.00724429408953936	NA	NA	NA	K00430//peroxidase [EC:1.11.1.7]	gi|460390532|ref|XP_004240883.1|//PREDICTED: peroxidase P7-like [Solanum lycopersicum]
Solyc07g007870.3.1	2069	1646.23997947266	17021.8628037999	3.37014236431698	6.896651559368e-11	Up	4.07454626569192e-12	GO:0042579//microbody	GO:0000166//nucleotide binding;GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	GO:0006633//fatty acid biosynthetic process	K05894//12-oxophytodienoic acid reductase [EC:1.3.1.42]	gi|350539279|ref|NP_001233873.1|//12-oxophytodienoate reductase 3 [Solanum lycopersicum];gi|697118839|ref|XP_009613359.1|//PREDICTED: 12-oxophytodienoate reductase 3 [Nicotiana tomentosiformis]
Solyc11g007040.2.1	2247	226.537196433076	80.5851330005944	-1.49116234571671	0.000696060213026588	Down	0.000148640560624322	NA	NA	NA	NA	gi|970598240|ref|NP_001305142.1|//uncharacterized LOC101243844 isoform 1 [Solanum lycopersicum]
Solyc11g012850.2.1	5777	3721.19982247938	113.503387511624	-5.03496060241697	1.18801282881545e-41	Down	3.23262772116923e-44	NA	NA	NA	K13600//chlorophyllide a oxygenase [EC:1.14.13.122]	gi|460409770|ref|XP_004250311.1|//PREDICTED: chlorophyllide a oxygenase, chloroplastic-like [Solanum lycopersicum]
Solyc01g106630.2.1	893	1.23320621739237	2632.58612671027	11.059850947223	3.7022427249415e-23	Up	4.96797145139011e-25	NA	NA	GO:0006950//response to stress	K13449//pathogenesis-related protein 1	gi|350538759|ref|NP_001234358.1|//PR1 protein precursor [Solanum lycopersicum]
Solyc04g074830.1.1	1017	114.678206482889	2854.67515164789	4.6376634312872	3.23781788186676e-21	Up	5.24992835325794e-23	NA	NA	NA	K20043//clathrin coat assembly protein AP180;K20044//phosphatidylinositol-binding clathrin assembly protein	gi|460384519|ref|XP_004237958.1|//PREDICTED: putative clathrin assembly protein At4g40080 [Solanum lycopersicum]
Solyc08g077800.3.1	3235	263.21998867688	654.964892781942	1.3151485277163	2.03690992072581e-06	Up	2.53436906045279e-07	NA	NA	NA	K10848//DNA excision repair protein ERCC-4 [EC:3.1.-.-]	gi|723725311|ref|XP_010325528.1|//PREDICTED: DNA repair endonuclease UVH1 [Solanum lycopersicum]
Solyc11g066340.2.1	2075	134.41486039935	42.922253200997	-1.64689492846862	0.0011099795567362	Down	0.00024948474456237	NA	NA	NA	NA	gi|460411151|ref|XP_004250978.1|//PREDICTED: uncharacterized protein LOC101261194 isoform X1 [Solanum lycopersicum]
Solyc04g024780.1.1	1014	15.4720661698404	630.232347079278	5.34814602843418	2.10817411111708e-23	Up	2.76605519275836e-25	NA	NA	GO:0009628//response to abiotic stimulus	NA	gi|723691545|ref|XP_010319613.1|//PREDICTED: uncharacterized protein LOC104646853 [Solanum lycopersicum]
Solyc06g053380.3.1	1127	54.2205188506115	6.07061252867646	-3.15892492098748	1.11353077388827e-06	Down	1.3223904300015e-07	NA	NA	NA	K01183//chitinase [EC:3.2.1.14]	gi|460390757|ref|XP_004240991.1|//PREDICTED: endochitinase PR4-like [Solanum lycopersicum]
Solyc07g053230.3.1	1027	113.312873920218	768.74237922946	2.7621884228328	0.00394859780687869	Up	0.00102585830900345	NA	NA	NA	K09422//myb proto-oncogene protein, plant	gi|460395688|ref|XP_004243413.1|//PREDICTED: myb-related protein Myb4-like [Solanum lycopersicum]
Solyc01g106430.3.1	1571	8870.96948767025	2437.37864882207	-1.86376138957647	1.15782792611488e-12	Down	5.20959714377638e-14	NA	NA	NA	K01507//inorganic pyrophosphatase [EC:3.6.1.1]	gi|460369622|ref|XP_004230656.1|//PREDICTED: soluble inorganic pyrophosphatase 1, chloroplastic [Solanum lycopersicum]
Solyc02g086970.3.1	2819	1403.06650706544	466.823371556327	-1.58763469945503	4.71393474036453e-05	Down	7.65917755078612e-06	NA	GO:0016620//oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	GO:0008152//metabolic process	K00128//aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]	gi|723671681|ref|XP_010316283.1|//PREDICTED: aldehyde dehydrogenase family 2 member B7, mitochondrial-like [Solanum lycopersicum]
Solyc08g078850.3.1	1125	109.137488614235	643.124727988151	2.5589518107685	1.92232544562352e-05	Up	2.89910867488921e-06	GO:0044424//intracellular part	GO:0004457//lactate dehydrogenase activity	GO:0006007//glucose catabolic process	K00016//L-lactate dehydrogenase [EC:1.1.1.27]	gi|525314391|ref|NP_001266265.1|//L-lactate dehydrogenase A-like [Solanum lycopersicum]
Solyc04g040010.3.1	1058	30.1533256104424	0.44566477485044	-6.08021438004933	6.60042746107927e-06	Down	9.05627459528582e-07	NA	NA	NA	NA	gi|565346128|ref|XP_006340118.1|//PREDICTED: uncharacterized protein LOC102588408 [Solanum tuberosum]
Solyc10g076300.2.1	1009	179.464381797402	14.3646428485241	-3.64310351315881	9.02967325512378e-17	Down	2.38296133316969e-18	NA	NA	NA	NA	gi|460407234|ref|XP_004249059.1|//PREDICTED: CASP-like protein 4B1 [Solanum lycopersicum]
Solyc12g096790.1.1	564	197.092203174425	24.2882059699629	-3.02054287009425	0.00222399573292851	Down	0.000537181017943073	NA	NA	NA	K13065//shikimate O-hydroxycinnamoyltransferase [EC:2.3.1.133];K15400//omega-hydroxypalmitate O-feruloyl transferase [EC:2.3.1.188];K19861//benzyl alcohol O-benzoyltransferase [EC:2.3.1.196 2.3.1.232]	gi|460415366|ref|XP_004253030.1|//PREDICTED: pelargonidin 3-O-(6-caffeoylglucoside) 5-O-(6-O-malonylglucoside) 4'''-malonyltransferase-like [Solanum lycopersicum]
Solyc02g091350.3.1	3154	787.953436906409	101.838625187451	-2.9518255297688	8.19647804301216e-23	Down	1.14875344571812e-24	NA	GO:0016758//transferase activity, transferring hexosyl groups	GO:0008152//metabolic process	K13493//cytokinin-N-glucosyltransferase [EC:2.4.1.-];K13030//cyanohydrin beta-glucosyltransferase [EC:2.4.1.85];K00699//glucuronosyltransferase [EC:2.4.1.17]	gi|723669932|ref|XP_010316061.1|//PREDICTED: 7-deoxyloganetic acid glucosyltransferase-like [Solanum lycopersicum]
Solyc00g127870.3.1	871	280.117165245354	2076.68679500913	2.89018134809322	7.80610883081517e-20	Up	1.48685016122952e-21	NA	NA	NA	K03861//phosphatidylinositol glycan, class P	gi|565376265|ref|XP_006354627.1|//PREDICTED: phosphatidylinositol N-acetylglucosaminyltransferase subunit P-like isoform X1 [Solanum tuberosum]
Solyc09g010280.3.1	3912	8204.39917031829	2620.63817380905	-1.64647950782223	1.04575215656282e-06	Down	1.23410292518186e-07	NA	NA	NA	K04427//mitogen-activated protein kinase kinase kinase 7 [EC:2.7.11.25];K17800//LETM1 and EF-hand domain-containing protein 1, mitochondrial;K07897//Ras-related protein Rab-7A	gi|460401952|ref|XP_004246479.1|//PREDICTED: uncharacterized protein LOC101244408 isoform X1 [Solanum lycopersicum];gi|723727644|ref|XP_010325895.1|//PREDICTED: uncharacterized protein LOC101244408 isoform X2 [Solanum lycopersicum]
Solyc08g061980.3.1	2834	343.029083456421	110.331891676823	-1.63648103397429	0.0178268540654281	Down	0.00563617773158496	NA	NA	NA	NA	gi|460399048|ref|XP_004245056.1|//PREDICTED: mechanosensitive ion channel protein 10 [Solanum lycopersicum]
Solyc09g066130.3.1	2146	2069.86637442867	553.279344518291	-1.90345766380999	2.00463830361053e-10	Down	1.26877733693554e-11	NA	NA	NA	K00847//fructokinase [EC:2.7.1.4];K03593//ATP-binding protein involved in chromosome partitioning	gi|460403496|ref|XP_004247226.1|//PREDICTED: probable fructokinase-4 [Solanum lycopersicum]
Solyc08g062810.1.1	324	3.99191656585651	71.5320817742805	4.16343695574752	1.72165236429713e-05	Up	2.56759024509945e-06	NA	NA	NA	NA	gi|723722276|ref|XP_010325025.1|//PREDICTED: uncharacterized protein LOC101255120 [Solanum lycopersicum]
Solyc04g072770.3.1	3818	388.383657657588	147.945025499	-1.39242130836023	1.44095843300233e-05	Down	2.11675010603183e-06	NA	GO:0000166//nucleotide binding	GO:0008033//tRNA processing	K03650//tRNA modification GTPase [EC:3.6.-.-]	gi|723694211|ref|XP_010320153.1|//PREDICTED: probable tRNA modification GTPase MnmE isoform X2 [Solanum lycopersicum];gi|460384367|ref|XP_004237883.1|//PREDICTED: probable tRNA modification GTPase MnmE isoform X1 [Solanum lycopersicum]
Solyc05g053600.3.1	4461	175.244938391921	1543.96042925044	3.13919109718018	0.000826205510932601	Up	0.000179943298060951	GO:0031224//intrinsic component of membrane	GO:0032559//adenyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity	GO:0009207//purine ribonucleoside triphosphate catabolic process;GO:0051234//establishment of localization	K05681//ATP-binding cassette, subfamily G (WHITE), member 2	gi|460388420|ref|XP_004239865.1|//PREDICTED: pleiotropic drug resistance protein 1-like [Solanum lycopersicum]
Solyc11g017230.2.1	3344	248.970975819622	115.078978418666	-1.11335324854166	0.000400091036568644	Down	8.05013946398366e-05	NA	GO:0003824//catalytic activity	NA	K06063//SNW domain-containing protein 1	gi|460409901|ref|XP_004250375.1|//PREDICTED: uncharacterized protein LOC101264171 isoform X2 [Solanum lycopersicum]
Solyc08g080190.3.1	2574	1308.90325281363	85.3425145532039	-3.93895003553998	9.95505936485237e-20	Down	1.91843062905497e-21	NA	GO:0050662//coenzyme binding;GO:0016491//oxidoreductase activity	GO:0044281//small molecule metabolic process	K15403//fatty acid omega-hydroxy dehydrogenase [EC:1.1.-.-];K00108//choline dehydrogenase [EC:1.1.99.1]	gi|460400271|ref|XP_004245659.1|//PREDICTED: protein HOTHEAD [Solanum lycopersicum]
Solyc05g055330.3.1	4814	614.331803055428	214.768528224086	-1.51623547244348	0.00170435562519642	Down	0.000399648875239856	NA	NA	NA	K05681//ATP-binding cassette, subfamily G (WHITE), member 2	gi|460388127|ref|XP_004239721.1|//PREDICTED: pleiotropic drug resistance protein 2-like [Solanum lycopersicum];gi|971547687|ref|XP_015163517.1|//PREDICTED: pleiotropic drug resistance protein 2-like [Solanum tuberosum]
Solyc08g068770.2.1	773	1464.53555554257	12360.8884156647	3.07726731390781	3.53336002224863e-07	Up	3.8036170211175e-08	NA	GO:0016407//acetyltransferase activity	NA	NA	gi|460399518|ref|XP_004245286.1|//PREDICTED: tyramine N-feruloyltransferase 4/11-like [Solanum lycopersicum]
Solyc09g007110.3.1	3881	701.784628680359	148.017951810611	-2.2452561900623	0.0127464730723214	Down	0.00383943077745002	NA	NA	NA	K20718;K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|723728552|ref|XP_010326028.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g20940 [Solanum lycopersicum]
Solyc05g018320.3.1	2382	1168.34052340828	2655.50929670386	1.18452775816777	1.73763077008622e-07	Up	1.76690649351246e-08	GO:0043231//intracellular membrane-bounded organelle	NA	NA	K05747//Wiskott-Aldrich syndrome protein	gi|460387189|ref|XP_004239269.1|//PREDICTED: ninja-family protein mc410 [Solanum lycopersicum]
Solyc04g014810.3.1	2392	1220.83090257656	510.108216510765	-1.25898814223046	0.0236746371071218	Down	0.0078265378150836	NA	GO:0003824//catalytic activity	NA	K08332//vacuolar protein 8	gi|460381874|ref|XP_004236666.1|//PREDICTED: U-box domain-containing protein 4-like [Solanum lycopersicum]
Solyc11g073060.2.1	456	24.1385139287075	268.533752723826	3.4756946704022	2.63486432637367e-05	Up	4.09065582232773e-06	NA	NA	NA	K14841//ribosome biogenesis protein NSA1	gi|460411827|ref|XP_004251306.1|//PREDICTED: zinc finger protein ZAT11-like [Solanum lycopersicum]
Solyc10g080050.2.1	546	1.41502418655974	39.1085292397825	4.78858466353678	3.15859697891711e-07	Up	3.35545004842469e-08	NA	NA	NA	NA	gi|460407636|ref|XP_004249257.1|//PREDICTED: protein MIZU-KUSSEI 1-like [Solanum lycopersicum]
Solyc09g010150.3.1	1478	120.027840788975	48.1354423793628	-1.31819762742582	0.00043647813155906	Down	8.86687720663812e-05	NA	NA	NA	K12581//CCR4-NOT transcription complex subunit 7/8;K11153//retinol dehydrogenase 12 [EC:1.1.1.300];K19329//WW domain-containing oxidoreductase	gi|460401964|ref|XP_004246485.1|//PREDICTED: dehydrogenase/reductase SDR family member on chromosome X isoform X1 [Solanum lycopersicum]
Solyc10g009580.3.1	1816	424.292293794988	13.7767767899595	-4.94474817574164	2.41158754588581e-13	Down	9.80707474489867e-15	NA	GO:0016758//transferase activity, transferring hexosyl groups	NA	K08237//hydroquinone glucosyltransferase [EC:2.4.1.218]	gi|970055664|ref|XP_015089477.1|//PREDICTED: hydroquinone glucosyltransferase-like [Solanum pennellii];gi|460405978|ref|XP_004248451.1|//PREDICTED: hydroquinone glucosyltransferase-like isoform X1 [Solanum lycopersicum]
Solyc06g068080.3.1	976	365.083396712506	1758.90660195795	2.26838091325948	3.75185727788983e-12	Up	1.81523436212204e-13	NA	NA	GO:0015031//protein transport;GO:0051234//establishment of localization	K20472//coatomer subunit zeta	gi|565379595|ref|XP_006356206.1|//PREDICTED: uncharacterized protein LOC102594798 [Solanum tuberosum]
Solyc06g076850.3.1	2676	4225.4600865899	1606.42665349768	-1.39525332540197	0.000238741787924566	Down	4.55894654665854e-05	NA	NA	NA	NA	gi|460391124|ref|XP_004241173.1|//PREDICTED: uncharacterized protein LOC101258865 [Solanum lycopersicum]
Solyc04g015220.3.1	2876	0.421871530756487	34.3134179016623	6.34582529409155	1.19759711024802e-06	Up	1.42936705942081e-07	NA	NA	NA	K13453;K13457//disease resistance protein RPM1	gi|723689026|ref|XP_010319214.1|//PREDICTED: putative late blight resistance protein homolog R1B-16 [Solanum lycopersicum]
Solyc03g044330.1.1	1980	5969.14683824622	1900.19104755422	-1.65138026766443	0.00036968025907169	Down	7.36935300997241e-05	GO:0009536//plastid	GO:0046872//metal ion binding;GO:0019842//vitamin binding;GO:0050662//coenzyme binding;GO:0016744//transferase activity, transferring aldehyde or ketonic groups	GO:0008652//cellular amino acid biosynthetic process;GO:0006950//response to stress	K01652//acetolactate synthase I/II/III large subunit [EC:2.2.1.6]	gi|460377776|ref|XP_004234664.1|//PREDICTED: acetolactate synthase 2, chloroplastic [Solanum lycopersicum]
Solyc10g081170.2.1	1821	9143.42614919671	74779.3697120643	3.03183354481314	4.27447294756315e-29	Up	3.28217320410769e-31	GO:0005829//cytosol	GO:0046872//metal ion binding;GO:0005509//calcium ion binding;GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	GO:0009593//detection of chemical stimulus;GO:0008152//metabolic process;GO:0019932//second-messenger-mediated signaling;GO:0019722//calcium-mediated signaling;GO:0009640//photomorphogenesis	K02183//calmodulin	gi|565474632|ref|XP_006294957.1|//hypothetical protein CARUB_v10024013mg [Capsella rubella];gi|747915|emb|CAA54582.1|//calmodulin [Zea mays]
Solyc10g011790.3.1	2415	947.378722176413	2252.85566611547	1.24974171234936	0.00300194918224595	Up	0.000752949010262896	NA	NA	NA	NA	gi|460405210|ref|XP_004248069.1|//PREDICTED: BTB/POZ domain-containing protein POB1-like isoform X2 [Solanum lycopersicum]
Solyc04g054257.1.1	1674	2.29978640827222	31.2685483367416	3.76514045994742	0.00326229336240767	Up	0.000826030968049623	NA	NA	NA	K20562	gi|460416356|ref|XP_004253509.1|//PREDICTED: cytochrome P450 CYP736A12-like [Solanum lycopersicum]
Solyc11g027830.2.1	1503	1123.73761737385	132.757561671794	-3.08143927633326	1.33486024042385e-18	Down	2.85103219681999e-20	NA	NA	NA	NA	gi|460410430|ref|XP_004250632.1|//PREDICTED: uncharacterized protein LOC101246986 isoform X1 [Solanum lycopersicum];gi|723743397|ref|XP_010312977.1|//PREDICTED: uncharacterized protein LOC101246986 isoform X2 [Solanum lycopersicum]
Solyc08g067650.1.1	471	3.30200028465617	29.8511355591256	3.17637366397864	0.000856379860306091	Up	0.000187408907106645	NA	NA	NA	NA	gi|565352991|ref|XP_006343420.1|//PREDICTED: uncharacterized protein LOC102579274 [Solanum tuberosum]
Solyc07g007560.3.1	3502	1813.94371789603	63.5496403642753	-4.83510192228939	2.00942811822499e-27	Down	1.78262968591601e-29	NA	NA	GO:0006810//transport	K08193//MFS transporter, ACS family, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), other;K07964//heparanase 1 [EC:3.2.1.166]	gi|460394282|ref|XP_004242733.1|//PREDICTED: probable anion transporter 6, chloroplastic [Solanum lycopersicum]
Solyc08g007845.1.1	1602	0.447373315879962	27.136110274587	5.92259091988339	1.4714234010075e-05	Up	2.1675358881697e-06	NA	NA	NA	K03327//multidrug resistance protein, MATE family	gi|460398097|ref|XP_004244600.1|//PREDICTED: MATE efflux family protein 5-like [Solanum lycopersicum]
Solyc11g017370.2.1	3746	231.456566829437	38.7277795970671	-2.5793008010504	2.0237341629502e-05	Down	3.07090419612728e-06	NA	NA	NA	K01176//alpha-amylase [EC:3.2.1.1];K17710//pentatricopeptide repeat domain-containing protein 1	gi|723742678|ref|XP_010312832.1|//PREDICTED: pentatricopeptide repeat-containing protein At3g22150, chloroplastic [Solanum lycopersicum]
Solyc08g079317.1.1	4185	105.246543089235	1.5073880103705	-6.12557821455321	1.06190717351732e-12	Down	4.75380391901855e-14	NA	NA	NA	K13083//flavonoid 3',5'-hydroxylase [EC:1.14.13.88];K20770;K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30]	gi|565378149|ref|XP_006355524.1|//PREDICTED: geraniol 8-hydroxylase-like [Solanum tuberosum];gi|723724833|ref|XP_010325460.1|//PREDICTED: geraniol 8-hydroxylase-like isoform X1 [Solanum lycopersicum]
Solyc04g079750.3.1	964	66.6834854825878	620.12870666714	3.21716625578895	3.85340340565005e-15	Up	1.21801330251649e-16	GO:0044424//intracellular part;GO:0005737//cytoplasm	GO:0016415//octanoyltransferase activity	GO:0006464//cellular protein modification process;GO:0043412//macromolecule modification;GO:0006633//fatty acid biosynthetic process;GO:0009107//lipoate biosynthetic process	K03801//lipoyl(octanoyl) transferase [EC:2.3.1.181]	gi|460385027|ref|XP_004238207.1|//PREDICTED: plastidial lipoyltransferase 2 [Solanum lycopersicum]
Solyc05g009500.3.1	1888	589.420370329509	13.0533746809925	-5.49680218157203	2.33122602802369e-07	Down	2.42090193606456e-08	NA	NA	NA	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460386504|ref|XP_004238938.1|//PREDICTED: protein NRT1/ PTR FAMILY 3.1 [Solanum lycopersicum]
Solyc07g042810.2.1	1289	13.3031385071647	0.708382210919998	-4.23109485639546	0.0102819983747859	Down	0.00301392706199926	NA	NA	NA	NA	gi|460396202|ref|XP_004243667.1|//PREDICTED: chloroplast envelope membrane protein [Solanum lycopersicum]
Solyc10g055700.2.1	2107	319.685572480652	101.834463895952	-1.65042774010531	0.00104700768257936	Down	0.000233652713418914	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial;K17710//pentatricopeptide repeat domain-containing protein 1	gi|460406377|ref|XP_004248641.1|//PREDICTED: pentatricopeptide repeat-containing protein At2g17033 [Solanum lycopersicum];gi|460406810|ref|XP_004248851.1|//PREDICTED: mechanosensitive ion channel protein 6 [Solanum lycopersicum]
Solyc02g086770.3.1	1488	131.774774764896	52.5631359411945	-1.325950970954	0.000253322354360502	Down	4.87231008088635e-05	NA	NA	NA	K09753//cinnamoyl-CoA reductase [EC:1.2.1.44]	gi|460372979|ref|XP_004232300.1|//PREDICTED: cinnamoyl-CoA reductase 1 [Solanum lycopersicum]
Solyc10g054350.1.1	606	0.703422062137312	6.85229729933641	3.28412525723007	0.0274635250556843	Up	0.00930226077907421	NA	NA	NA	K19613//leucine-rich repeat protein SHOC2;K15078//structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]	gi|971574220|ref|XP_015170413.1|//PREDICTED: putative disease resistance protein RGA4 [Solanum tuberosum]
Solyc03g120885.1.1	705	131.897322903001	34.332930430036	-1.94175037626338	2.57453101134898e-07	Down	2.69179942106527e-08	NA	NA	NA	NA	gi|970015952|ref|XP_015069062.1|//PREDICTED: uncharacterized protein LOC107013702 [Solanum pennellii];gi|723685157|ref|XP_010318534.1|//PREDICTED: uncharacterized protein LOC101259427 [Solanum lycopersicum]
Solyc04g056270.3.1	4111	2387.80106066395	6690.02470110347	1.48632889397796	0.00139753440223202	Up	0.000320670062649263	NA	NA	NA	K20032//palmitoyltransferase ZDHHC13/17 [EC:2.3.1.225];K12271//signal recognition particle 43 kDa protein;K14674//TAG lipase / steryl ester hydrolase / phospholipase A2 / LPA acyltransferase [EC:3.1.1.3 3.1.1.13 3.1.1.4 2.3.1.51];K01803//triosephosphate isomerase (TIM) [EC:5.3.1.1]	gi|924181831|ref|NP_001266168.2|//ER66 protein [Solanum lycopersicum];gi|723691688|ref|XP_010319684.1|//PREDICTED: ER66 protein isoform X1 [Solanum lycopersicum]
Solyc05g054740.3.1	2519	1888.84412502035	597.223298815106	-1.66116129571118	8.43861474899531e-06	Down	1.18772212957381e-06	GO:0005887//integral component of plasma membrane	GO:0008271//secondary active sulfate transmembrane transporter activity	GO:1902358//sulfate transmembrane transport	K18059//sulfate transporter 4	gi|567757479|ref|NP_001274722.1|//probable sulfate transporter 4.2-like [Solanum lycopersicum]
Solyc01g081297.1.1	1860	178.059980566828	520.055431586906	1.54630210170767	0.00548466061230782	Up	0.00148360601101528	NA	GO:0000166//nucleotide binding;GO:0004672//protein kinase activity	NA	K13412//calcium-dependent protein kinase [EC:2.7.11.1];K04515//calcium/calmodulin-dependent protein kinase (CaM kinase) II [EC:2.7.11.17]	gi|460367451|ref|XP_004229587.1|//PREDICTED: serine/threonine-protein kinase PEPKR2 [Solanum lycopersicum]
Solyc08g006170.1.1	2258	370.725792019539	177.761646622816	-1.06040840365844	0.00580352206528143	Down	0.0015847846522384	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial	gi|565381351|ref|XP_006357037.1|//PREDICTED: pentatricopeptide repeat-containing protein At2g36240 [Solanum tuberosum];gi|460397841|ref|XP_004244475.1|//PREDICTED: pentatricopeptide repeat-containing protein At2g36240 [Solanum lycopersicum]
Solyc12g042210.2.1	1316	4.07547989304696	22.090923732287	2.43841189259553	0.0104256617303209	Up	0.00306070194528132	NA	NA	GO:0006952//defense response	K09286//EREBP-like factor	gi|723750672|ref|XP_004252471.2|//PREDICTED: ethylene-responsive transcription factor ERF114-like [Solanum lycopersicum]
Solyc06g064450.3.1	773	501.751083245174	246.806430278792	-1.02359184340762	0.00756640869069257	Down	0.0021369717701423	NA	NA	NA	NA	gi|460392631|ref|XP_004241919.1|//PREDICTED: uncharacterized protein LOC101252894 [Solanum lycopersicum]
Solyc05g008805.1.1	1834	466.208384341563	149.485562097187	-1.64096880028476	0.00408095979709851	Down	0.00106465773147057	GO:0044464//cell part;GO:0016021//integral component of membrane	GO:0016791//phosphatase activity	NA	K18693//diacylglycerol diphosphate phosphatase / phosphatidate phosphatase [EC:3.1.3.81 3.1.3.4]	gi|460386404|ref|XP_004238888.1|//PREDICTED: lipid phosphate phosphatase 2 [Solanum lycopersicum]
Solyc09g015475.1.1	665	42.1538717966685	4.52268256204025	-3.22041450276238	0.00686155272718671	Down	0.0019115567721408	NA	NA	NA	NA	gi|460401684|ref|XP_004246347.1|//PREDICTED: uncharacterized protein LOC101255724 [Solanum lycopersicum]
BGI_novel_G000435	2603	63.4429428996965	29.7620861278635	-1.09198404075965	0.0487490758122403	Down	0.018156432291483	NA	NA	NA	NA	gi|723742674|ref|XP_010312831.1|//PREDICTED: uncharacterized protein LOC101265394 [Solanum lycopersicum]
Solyc09g092310.1.1	2553	41.2278852645293	110.33074680713	1.42014252814648	0.0172466727433771	Up	0.00541738896706572	NA	GO:0032559//adenyl ribonucleotide binding;GO:0016462//pyrophosphatase activity	GO:0012501//programmed cell death;GO:0006950//response to stress	K13457//disease resistance protein RPM1	gi|460404826|ref|XP_004247881.1|//PREDICTED: disease resistance protein RPP13-like [Solanum lycopersicum]
Solyc02g070000.3.1	6009	1099.47219792818	251.907403273362	-2.12584569661258	3.77805585860824e-08	Down	3.41219224146704e-09	GO:0031224//intrinsic component of membrane	GO:0032559//adenyl ribonucleotide binding;GO:0016301//kinase activity;GO:0016791//phosphatase activity	GO:0006464//cellular protein modification process	K00924;K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1];K13415//protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1];K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|460374718|ref|XP_004233157.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g20940 [Solanum lycopersicum]
Solyc03g123500.4.1	2826	1865.7620120048	6920.54885294	1.8911214848502	6.28573948932107e-10	Up	4.32279311085335e-11	GO:0043231//intracellular membrane-bounded organelle	GO:0001071//nucleic acid binding transcription factor activity;GO:0003676//nucleic acid binding	GO:0006351//transcription, DNA-templated	K09286//EREBP-like factor	gi|723684474|ref|XP_010318408.1|//PREDICTED: JERF3 isoform X1 [Solanum lycopersicum]
Solyc07g053600.3.1	3249	405.977400233212	1072.70229206654	1.4017784158633	0.0259464108334476	Up	0.00871585859665385	NA	NA	NA	K00924	gi|460395627|ref|XP_004243383.1|//PREDICTED: receptor-like protein kinase HSL1 [Solanum lycopersicum]
Solyc11g010810.1.1	1413	1191.59485997946	147.131116179545	-3.01771951169823	9.16762279394865e-06	Down	1.29545467466301e-06	NA	GO:0016758//transferase activity, transferring hexosyl groups	NA	K18823//soyasaponin III rhamnosyltransferase [EC:2.4.1.273]	gi|460409467|ref|XP_004250160.1|//PREDICTED: UDP-glycosyltransferase 91A1-like [Solanum lycopersicum]
Solyc10g080740.2.1	3887	1506.875623894	3430.83147431818	1.18699791794411	0.00674562859683444	Up	0.00187725000387528	NA	NA	NA	K14409//protein SMG7	gi|723738650|ref|XP_010312160.1|//PREDICTED: protein SMG7-like [Solanum lycopersicum]
Solyc07g006890.1.1	1509	1222.55933721023	11632.7131992635	3.25021123488038	9.57445976279591e-07	Up	1.1177578640628e-07	NA	GO:0005506//iron ion binding;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K20769;K13407//fatty acid omega-hydroxylase [EC:1.14.-.-]	gi|460394196|ref|XP_004242690.1|//PREDICTED: cytochrome P450 94A1-like [Solanum lycopersicum]
Solyc05g050840.3.1	4732	1454.93271381843	5833.71769730395	2.00346313921295	1.31368167075529e-11	Up	6.88473396854758e-13	NA	NA	NA	K09481//protein transport protein SEC61 subunit beta	gi|460388812|ref|XP_004240058.1|//PREDICTED: flocculation protein FLO11-like [Solanum lycopersicum]
Solyc03g006100.3.1	4384	1841.92586736195	144.647978982774	-3.67059692671399	3.19033823013669e-11	Down	1.78971933664668e-12	NA	NA	NA	K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|723678782|ref|XP_010317427.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Solanum lycopersicum]
Solyc04g014250.3.1	1353	473.344486313469	1000.13145658094	1.07922721698935	0.00124837380997136	Up	0.000283289837300792	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K03868//RING-box protein 1	gi|460381944|ref|XP_004236701.1|//PREDICTED: GLABRA2 expression modulator-like [Solanum lycopersicum]
Solyc12g027760.1.1	788	68.8335582828993	323.557127139077	2.2328364607752	7.24569656146413e-07	Up	8.20772023642817e-08	NA	NA	NA	NA	NA
Solyc06g072740.1.1	954	43.4267566757472	238.721119457061	2.45867009173451	6.41972934890136e-06	Up	8.77962836630352e-07	NA	NA	NA	K00913//inositol-1,3,4-trisphosphate 5/6-kinase / inositol-tetrakisphosphate 1-kinase [EC:2.7.1.159 2.7.1.134]	gi|460391672|ref|XP_004241443.1|//PREDICTED: inositol-tetrakisphosphate 1-kinase 1-like [Solanum lycopersicum]
Solyc04g074490.3.1	3286	1408.55107413327	5311.38252955145	1.91487556024005	1.18406504256221e-10	Up	7.20290051238081e-12	NA	NA	NA	K11323//histone arginine demethylase JMJD6 [EC:1.14.11.-]	gi|460384472|ref|XP_004237935.1|//PREDICTED: F-box protein At1g78280 [Solanum lycopersicum]
Solyc05g018185.1.1	730	1.10331674364268	9.21514672408778	3.06216011288698	0.0288839806444932	Up	0.00984996005094737	NA	NA	NA	NA	NA
Solyc01g098780.3.1	625	902.040957157034	2292.34296273583	1.34555805955824	8.02652807292447e-06	Up	1.12284031078297e-06	GO:0031224//intrinsic component of membrane;GO:0043234//protein complex	GO:0016787//hydrolase activity	NA	K12948//signal peptidase complex subunit 3 [EC:3.4.-.-]	gi|460368648|ref|XP_004230177.1|//PREDICTED: signal peptidase complex subunit 3B [Solanum lycopersicum]
Solyc03g121250.3.1	2103	142.489591119739	416.803236633191	1.54850994663154	0.000420946293300041	Up	8.51526589287059e-05	NA	NA	NA	K18740//exonuclease 3'-5' domain-containing protein 1	gi|971542777|ref|XP_015162253.1|//PREDICTED: uncharacterized protein LOC102600317 isoform X3 [Solanum tuberosum];gi|723685050|ref|XP_010318517.1|//PREDICTED: uncharacterized protein LOC101249716 isoform X2 [Solanum lycopersicum];gi|723685047|ref|XP_010318516.1|//PREDICTED: uncharacterized protein LOC101249716 isoform X1 [Solanum lycopersicum];gi|723685053|ref|XP_010318518.1|//PREDICTED: exonuclease 3'-5' domain-containing protein 1-like isoform X3 [Solanum lycopersicum]
Solyc03g059390.3.1	1092	127.655075236014	280.962463282762	1.13812650187135	0.00394063982419976	Up	0.00102305637302637	NA	NA	NA	K17345//tetraspanin-5;K17294	gi|460378054|ref|XP_004234795.1|//PREDICTED: tetraspanin-2-like [Solanum lycopersicum]
Solyc03g121190.3.1	511	2.53352328444697	254.023089380055	6.64767073815382	6.65166008838639e-24	Up	8.33069103063154e-26	GO:0044464//cell part	NA	NA	NA	gi|566161095|ref|XP_006385495.1|//hypothetical protein POPTR_0003s05980g [Populus trichocarpa]
Solyc10g078430.2.1	1717	282.377984015628	777.500358076754	1.461215728366	2.38808817756822e-09	Up	1.79364756142835e-10	NA	NA	NA	K04683//transcription factor Dp-1	gi|460407389|ref|XP_004249135.1|//PREDICTED: transcription factor-like protein DPB isoform X2 [Solanum lycopersicum];gi|807201114|ref|NP_001293114.1|//transcription factor-like protein DPB [Solanum lycopersicum]
Solyc08g008440.2.1	1186	0.425654730002506	19.6013367662527	5.52512457378602	8.89362927747576e-05	Up	1.53586493374628e-05	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K00059//3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]	gi|460398185|ref|XP_004244643.1|//PREDICTED: short-chain type dehydrogenase/reductase-like [Solanum lycopersicum]
Solyc04g082140.3.1	1971	6043.36538384197	16260.1180425688	1.42791365529468	0.00977189226517384	Up	0.00284910322417585	NA	NA	NA	K19791//iron transport multicopper oxidase	gi|460385429|ref|XP_004238406.1|//PREDICTED: L-ascorbate oxidase homolog [Solanum lycopersicum]
Solyc01g100190.3.1	3322	424.005956260736	204.612396189712	-1.05119097968451	0.00245286027518979	Down	0.000600323563698233	GO:0005634//nucleus	GO:0043565//sequence-specific DNA binding;GO:0003700//transcription factor activity, sequence-specific DNA binding	GO:0006355//regulation of transcription, DNA-templated	K20893;K14494//DELLA protein	gi|460368855|ref|XP_004230280.1|//PREDICTED: protein misato homolog 1 isoform X2 [Solanum lycopersicum];gi|350539890|ref|NP_001234310.1|//GRAS4 isoform 1 [Solanum lycopersicum]
Solyc09g097980.3.1	2893	532.506198156356	253.054531272534	-1.07335000990128	0.00633841311801712	Down	0.00174904101359329	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process;GO:0009755//hormone-mediated signaling pathway	K05275//pyridoxine 4-dehydrogenase [EC:1.1.1.65]	gi|460405103|ref|XP_004248016.1|//PREDICTED: auxin-induced protein PCNT115 [Solanum lycopersicum]
Solyc02g087180.3.1	2641	731.906932433374	254.318391066618	-1.52502441598382	7.29176988153995e-07	Down	8.2680647009261e-08	NA	NA	NA	NA	gi|723671626|ref|XP_010316275.1|//PREDICTED: mediator of RNA polymerase II transcription subunit 4-like isoform X1 [Solanum lycopersicum]
Solyc06g068220.3.1	1583	6286.41549381075	2066.11581354567	-1.60531650371006	6.40407471560848e-08	Down	6.04648921076348e-09	GO:0009526//plastid envelope	GO:0019120//hydrolase activity, acting on acid halide bonds, in C-halide compounds	NA	NA	gi|460392174|ref|XP_004241692.1|//PREDICTED: uncharacterized protein LOC101262019 [Solanum lycopersicum]
Solyc02g082060.2.1	642	397.41583413348	3469.3879617237	3.12595991818262	1.28616209679217e-14	Up	4.373388061613e-16	NA	NA	NA	K08825//dual specificity tyrosine-phosphorylation-regulated kinase 1 [EC:2.7.12.1]	gi|460373616|ref|XP_004232611.1|//PREDICTED: deSI-like protein At4g17486 [Solanum lycopersicum]
Solyc01g098805.1.1	6663	55.5366371660111	207.166277020783	1.89927744971013	0.00208200439551479	Up	0.000499208096134305	NA	NA	NA	K13754//solute carrier family 24 (sodium/potassium/calcium exchanger), member 6	gi|460368650|ref|XP_004230178.1|//PREDICTED: cation/calcium exchanger 5 [Solanum lycopersicum];gi|460370857|ref|XP_004231265.1|//PREDICTED: uncharacterized protein LOC101262870 [Solanum lycopersicum]
Solyc01g098910.3.1	1673	306.288466807642	10621.5105145193	5.11595409642873	2.47932389551427e-126	Up	9.24155321125045e-131	GO:0031224//intrinsic component of membrane;GO:0019866//organelle inner membrane	NA	GO:0006810//transport	K13354//solute carrier family 25 (peroxisomal adenine nucleotide transporter), member 17	gi|460368668|ref|XP_004230187.1|//PREDICTED: peroxisomal adenine nucleotide carrier 1 [Solanum lycopersicum]
Solyc02g067360.3.1	1774	783.145814981389	219.653660948107	-1.83405040497128	4.97127129029938e-05	Down	8.12547510360921e-06	NA	NA	NA	K08669//HtrA serine peptidase 2 [EC:3.4.21.108]	gi|460375130|ref|XP_004233360.1|//PREDICTED: protease Do-like 8, chloroplastic [Solanum lycopersicum]
Solyc10g078490.2.1	1541	936.080431643502	3353.71437919248	1.84105542409663	4.33723820770148e-09	Up	3.40150185962573e-10	GO:0016020//membrane;GO:0005887//integral component of plasma membrane	GO:0015250//water channel activity;GO:0015254//glycerol channel activity	GO:0006833//water transport;GO:0034220//ion transmembrane transport;GO:0009992//cellular water homeostasis;GO:0015793//glycerol transport	K09875//aquaporin SIP	gi|460407401|ref|XP_004249141.1|//PREDICTED: aquaporin SIP1-2-like isoform X1 [Solanum lycopersicum];gi|565324119|ref|NP_001274281.1|//aquaporin SIP1-2-like [Solanum lycopersicum]
Solyc12g005300.2.1	1581	1081.25776040626	2170.2768998676	1.00516863674171	0.00619396107465669	Up	0.00170363943528745	NA	NA	NA	K08099//chlorophyllase [EC:3.1.1.14]	gi|460412186|ref|XP_004251483.1|//PREDICTED: chlorophyllase-2, chloroplastic-like [Solanum lycopersicum]
Solyc04g054820.3.1	2016	59.5571537545436	1130.95011821875	4.24711667992507	1.48040672797905e-40	Up	4.58005659841439e-43	NA	NA	NA	K01834//2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]	gi|460383402|ref|XP_004237414.1|//PREDICTED: phosphoglycerate mutase isoform X3 [Solanum lycopersicum];gi|723692103|ref|XP_010319749.1|//PREDICTED: phosphoglycerate mutase isoform X1 [Solanum lycopersicum];gi|460383400|ref|XP_004237413.1|//PREDICTED: phosphoglycerate mutase isoform X2 [Solanum lycopersicum]
Solyc12g089195.1.1	1470	59.9266926971988	25.0167556686508	-1.2603040512	0.0489696163530383	Down	0.0182531744271054	NA	NA	NA	K12735//peptidyl-prolyl cis-trans isomerase-like 4 [EC:5.2.1.8]	gi|970065683|ref|XP_015059802.1|//PREDICTED: peptidyl-prolyl cis-trans isomerase CYP59-like [Solanum pennellii]
Solyc03g117950.3.1	3276	4030.35589801903	32268.2506914986	3.00113622360093	2.5798553770706e-08	Up	2.2540558386214e-09	NA	GO:0032559//adenyl ribonucleotide binding;GO:0016462//pyrophosphatase activity	GO:0043170//macromolecule metabolic process	K03696//ATP-dependent Clp protease ATP-binding subunit ClpC	gi|723686103|ref|XP_010318683.1|//PREDICTED: chaperone protein ClpD, chloroplastic isoform X2 [Solanum lycopersicum]
Solyc06g074670.3.1	1962	1774.60686170314	5281.02912196947	1.57331964515459	3.67500774691917e-09	Up	2.84104892914505e-10	NA	GO:0048037//cofactor binding	GO:0008152//metabolic process	K12449//UDP-apiose/xylose synthase	gi|460391381|ref|XP_004241299.1|//PREDICTED: UDP-D-apiose/UDP-D-xylose synthase 2-like [Solanum lycopersicum]
Solyc04g008020.3.1	1915	1356.6997305159	377.764920510693	-1.84454081033666	1.0161692829993e-07	Down	9.89930870411295e-09	NA	NA	NA	K13148//integrator complex subunit 11 [EC:3.1.27.-]	gi|723691074|ref|XP_010319559.1|//PREDICTED: cleavage and polyadenylation specificity factor subunit 3-II [Solanum lycopersicum]
Solyc12g096870.1.1	1461	73.30705820327	4.24662666874503	-4.1095629231046	8.12356915074326e-09	Down	6.60410925815233e-10	NA	GO:0016758//transferase activity, transferring hexosyl groups	NA	K08236//limonoid glucosyltransferase [EC:2.4.1.210];K13068//sinapate 1-glucosyltransferase [EC:2.4.1.120]	gi|460415354|ref|XP_004253024.1|//PREDICTED: cinnamate beta-D-glucosyltransferase-like [Solanum lycopersicum]
Solyc11g072470.2.1	909	155.608958985842	723.410646348688	2.21688970609348	0.00435458857094817	Up	0.00114513278544951	NA	NA	NA	K13944	gi|460411743|ref|XP_004251265.1|//PREDICTED: LOB domain-containing protein 1 [Solanum lycopersicum]
Solyc01g102740.3.1	1465	380.978439781346	103.98530086741	-1.873329748867	0.000296022668802042	Down	5.77914064209631e-05	NA	NA	NA	K12581//CCR4-NOT transcription complex subunit 7/8;K13126//polyadenylate-binding protein;K03094//S-phase kinase-associated protein 1;K01054//acylglycerol lipase [EC:3.1.1.23]	gi|460369087|ref|XP_004230395.1|//PREDICTED: NAC domain-containing protein 55 isoform X2 [Solanum lycopersicum]
Solyc08g078510.3.1	1338	944.908168841303	8697.93039621652	3.20242613136699	1.04602227923617e-07	Up	1.02276614644958e-08	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K03868//RING-box protein 1	gi|460400511|ref|XP_004245778.1|//PREDICTED: GEM-like protein 5 [Solanum lycopersicum]
Solyc11g012670.1.1	2070	1805.53015453666	283.774677873722	-2.66960475129867	1.57430442130173e-08	Down	1.33324125734216e-09	NA	NA	NA	K17710//pentatricopeptide repeat domain-containing protein 1	gi|460409730|ref|XP_004250291.1|//PREDICTED: pentatricopeptide repeat-containing protein At4g16390, chloroplastic [Solanum lycopersicum]
Solyc12g042250.2.1	1097	57.9414448427809	3.4816389652111	-4.05675714746039	0.000888668305844196	Down	0.000195313161549982	GO:0031224//intrinsic component of membrane	NA	GO:0015833//peptide transport	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|971549174|ref|XP_015163861.1|//PREDICTED: protein NRT1/ PTR FAMILY 8.3-like [Solanum tuberosum]
Solyc07g006120.3.1	1600	139.492371411066	331.412898012726	1.24844352503621	0.00589239413295027	Up	0.00161124956609972	NA	NA	NA	K17908//autophagy-related protein 18	gi|460394080|ref|XP_004242633.1|//PREDICTED: autophagy-related protein 18b [Solanum lycopersicum]
Solyc06g066460.3.1	810	0.516782059396923	66.3631321152923	7.00468218169162	3.76801510748295e-08	Up	3.4010535454156e-09	NA	NA	NA	K14376//poly(A) polymerase [EC:2.7.7.19]	gi|970035976|ref|XP_015079326.1|//PREDICTED: nuclear poly(A) polymerase 4-like isoform X1 [Solanum pennellii]
Solyc03g112750.3.1	5779	61.1189926149768	146.535365300579	1.26155622150783	0.0174032618962702	Up	0.0054763059836109	GO:0005622//intracellular	GO:0005525//GTP binding	GO:0007264//small GTPase mediated signal transduction	K14319//Ran GTPase-activating protein 1	gi|726965316|ref|NP_001289839.1|//protein TORNADO 1 [Solanum lycopersicum]
Solyc05g050630.3.1	3795	3160.53525484232	555.229846121218	-2.50901188129372	1.05366998783888e-08	Down	8.71119737970271e-10	NA	NA	NA	K03255//protein TIF31	gi|723702471|ref|XP_010321501.1|//PREDICTED: clustered mitochondria protein homolog isoform X1 [Solanum lycopersicum];gi|723702484|ref|XP_010321505.1|//PREDICTED: clustered mitochondria protein homolog isoform X2 [Solanum lycopersicum]
Solyc06g009390.3.1	2136	131.472544765591	331.684322985761	1.33504927004434	0.00740495109319193	Up	0.0020883353202285	NA	GO:0004721//phosphoprotein phosphatase activity	NA	K14803//protein phosphatase PTC2/3 [EC:3.1.3.16]	gi|460389854|ref|XP_004240563.1|//PREDICTED: probable protein phosphatase 2C 47 [Solanum lycopersicum]
Solyc04g007410.3.1	1127	1042.0414450719	184.650358756666	-2.49654468834151	2.83129886257132e-07	Down	2.98400424729343e-08	NA	NA	NA	NA	gi|460382564|ref|XP_004237009.1|//PREDICTED: uncharacterized protein LOC101262408 [Solanum lycopersicum]
Solyc01g096380.1.1	945	5.03299218800448	21.5875996191479	2.10071457163808	0.0169762009043783	Up	0.00531850934103548	NA	NA	GO:0008152//metabolic process	NA	gi|460368336|ref|XP_004230023.1|//PREDICTED: uncharacterized protein LOC101264557 [Solanum lycopersicum]
Solyc03g116247.1.1	829	333.953387722755	135.955644746883	-1.29651069751456	0.00260981488627677	Down	0.0006436985650251	NA	NA	NA	K01988//lactosylceramide 4-alpha-galactosyltransferase [EC:2.4.1.228]	gi|723686692|ref|XP_010318804.1|//PREDICTED: uncharacterized protein At4g19900-like isoform X2 [Solanum lycopersicum];gi|723686686|ref|XP_010318802.1|//PREDICTED: uncharacterized protein At4g19900-like isoform X1 [Solanum lycopersicum]
Solyc10g085330.2.1	2815	1001.65209171347	116.559948026192	-3.10323745350341	5.71878342415375e-15	Down	1.84387492988407e-16	NA	NA	NA	K03327//multidrug resistance protein, MATE family;K20456//oxysterol-binding protein 1	gi|723739632|ref|XP_010312309.1|//PREDICTED: MATE efflux family protein 2, chloroplastic [Solanum lycopersicum]
Solyc03g080090.3.1	3133	2397.89504480359	15548.0346050892	2.6968918048961	3.44011774979712e-13	Up	1.42974925116438e-14	GO:0016020//membrane;GO:0005634//nucleus;GO:0016021//integral component of membrane	GO:0003677//DNA binding	GO:0006355//regulation of transcription, DNA-templated;GO:0006351//transcription, DNA-templated	K12581//CCR4-NOT transcription complex subunit 7/8;K13126//polyadenylate-binding protein;K01054//acylglycerol lipase [EC:3.1.1.23]	gi|723682509|ref|XP_010318064.1|//PREDICTED: uncharacterized protein LOC101253566 [Solanum lycopersicum];gi|970018326|ref|XP_015070326.1|//PREDICTED: protein NTM1-like 9 isoform X1 [Solanum pennellii]
Solyc02g069670.3.1	2922	227.279437358599	62.2962795333394	-1.86724925507186	2.50687022542425e-05	Down	3.87318364558801e-06	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K01187//alpha-glucosidase [EC:3.2.1.20]	gi|460374765|ref|XP_004233180.1|//PREDICTED: alpha-glucosidase-like [Solanum lycopersicum]
Solyc04g056600.3.1	2750	430.515812517323	890.519553381007	1.04858106164026	0.000127187921649566	Up	2.28035598305655e-05	NA	NA	NA	K14724//solute carrier family 9 (sodium/hydrogen exchanger), member 8	gi|460383315|ref|XP_004237373.1|//PREDICTED: sodium/hydrogen exchanger 6 [Solanum lycopersicum];gi|970025802|ref|XP_015074210.1|//PREDICTED: sodium/hydrogen exchanger 6-like [Solanum pennellii]
Solyc03g043750.3.1	2365	1128.87090114505	350.070632534495	-1.68916256333017	4.47642666041944e-07	Down	4.8872274073239e-08	NA	NA	NA	K17872//NADH:ubiquinone reductase (non-electrogenic) [EC:1.6.5.9]	gi|460377722|ref|XP_004234639.1|//PREDICTED: alternative NAD(P)H-ubiquinone oxidoreductase C1, chloroplastic/mitochondrial [Solanum lycopersicum]
Solyc08g075370.3.1	1024	6951.08902060587	32384.3577781825	2.21998620760356	2.35544393872375e-06	Up	2.96844936515022e-07	NA	NA	NA	NA	NA
Solyc03g062700.3.1	5235	2198.11414495874	159.47191700718	-3.78489201236571	3.21902547413833e-06	Down	4.16476719126813e-07	NA	NA	NA	NA	gi|460378075|ref|XP_004234804.1|//PREDICTED: uncharacterized protein LOC101262788 [Solanum lycopersicum]
Solyc03g096070.3.1	4487	39.8495987245486	206.618130319115	2.37432975147719	0.000228606745845729	Up	4.3471178460427e-05	NA	GO:0008081//phosphoric diester hydrolase activity	NA	K05857//phosphatidylinositol phospholipase C, delta [EC:3.1.4.11]	gi|807201102|ref|NP_001293118.1|//phosphatidylinositol phospholipase C 7 [Solanum lycopersicum]
Solyc01g008220.3.1	3389	350.222394632592	1701.58923916071	2.28053957127204	7.02841891342916e-06	Up	9.70376608593321e-07	NA	GO:0003824//catalytic activity	NA	K14611//solute carrier family 23 (nucleobase transporter), member 1/2;K10761//tRNA(His) guanylyltransferase [EC:2.7.7.79]	gi|460366026|ref|XP_004228894.1|//PREDICTED: UPF0664 stress-induced protein C29B12.11c-like [Solanum lycopersicum];gi|971571987|ref|XP_015169841.1|//PREDICTED: transcription factor TCP7-like isoform X3 [Solanum tuberosum]
Solyc09g059170.2.1	1410	1421.11611682715	116.817269787002	-3.60469896217181	6.05022947181172e-06	Down	8.23370650126159e-07	NA	GO:0035251//UDP-glucosyltransferase activity	NA	K17193//anthocyanidin 3-O-glucoside 2'''-O-xylosyltransferase [EC:2.4.2.51]	gi|460403139|ref|XP_004247056.1|//PREDICTED: anthocyanidin 3-O-glucosyltransferase-like [Solanum lycopersicum]
Solyc01g112060.3.1	2599	5290.37785937715	417.55905575035	-3.66331861013592	7.78050720345955e-07	Down	8.86864135536726e-08	NA	NA	NA	K19073//divinyl chlorophyllide a 8-vinyl-reductase [EC:1.3.1.75]	gi|460370485|ref|XP_004231083.1|//PREDICTED: uncharacterized protein ycf39 [Solanum lycopersicum]
Solyc01g066980.3.1	630	20.889408523349	270.808400491473	3.69642894342056	2.25108218719568e-13	Up	9.10401138030161e-15	NA	NA	NA	K14416//elongation factor 1 alpha-like protein	gi|460366726|ref|XP_004229230.1|//PREDICTED: flowering-promoting factor 1-like protein 3 [Solanum lycopersicum]
Solyc04g078800.3.1	1965	8.21600109370657	195.956046253903	4.57594990427231	1.26685428876018e-12	Up	5.71850508307954e-14	NA	NA	NA	K16818//phospholipase A1 [EC:3.1.1.32];K03147//phosphomethylpyrimidine synthase [EC:4.1.99.17]	gi|460384905|ref|XP_004238147.1|//PREDICTED: uncharacterized protein LOC101251879 [Solanum lycopersicum]
Solyc07g032640.2.1	1153	45811.2019749433	2529.66679706668	-4.17868114269491	9.37230347269719e-15	Down	3.11967608510459e-16	GO:0009523//photosystem II;GO:0009534//chloroplast thylakoid	GO:0046872//metal ion binding	GO:0042548//regulation of photosynthesis, light reaction	K02716//photosystem II oxygen-evolving enhancer protein 1	gi|460372520|ref|XP_004232077.1|//PREDICTED: oxygen-evolving enhancer protein 1, chloroplastic [Solanum lycopersicum]
Solyc03g026070.3.1	3356	367.157101543649	149.383867364237	-1.29737315140193	0.000215252019000935	Down	4.07589181647812e-05	NA	NA	NA	K09338//homeobox-leucine zipper protein	gi|460377320|ref|XP_004234441.1|//PREDICTED: homeobox-leucine zipper protein ROC5-like [Solanum lycopersicum]
Solyc09g005260.3.1	1860	7960.57776424428	322.389292747042	-4.62599740802992	7.98202452712382e-12	Down	4.03147578434948e-13	GO:0031224//intrinsic component of membrane	GO:0015075//ion transmembrane transporter activity	GO:0006811//ion transport	K07300//Ca2+:H+ antiporter	gi|723728843|ref|XP_010326090.1|//PREDICTED: LOW QUALITY PROTEIN: vacuolar cation/proton exchanger 3 [Solanum lycopersicum]
Solyc12g099580.2.1	1613	9.57626960932406	43.9580586036707	2.19859199598364	0.00118013172471253	Up	0.000266572172795509	NA	NA	NA	K00801//farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]	gi|460415102|ref|XP_004252899.1|//PREDICTED: WAT1-related protein At3g30340-like [Solanum lycopersicum]
Solyc04g079660.2.1	1949	39.1325652212062	1220.22058988836	4.96262848466461	3.63289722952277e-07	Up	3.91618413142233e-08	NA	NA	NA	K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30]	gi|460385013|ref|XP_004238200.1|//PREDICTED: cytochrome P450 CYP82D47-like [Solanum lycopersicum]
Solyc12g042570.2.1	1591	150.893353629097	449.092918219007	1.57348471117761	0.00104536178648999	Up	0.00023320748069713	NA	NA	NA	K17499//protein phosphatase 1G [EC:3.1.3.16]	gi|460413874|ref|XP_004252301.1|//PREDICTED: probable protein phosphatase 2C 60 [Solanum lycopersicum]
Solyc02g076680.3.1	4092	501.216317776062	178.312653633942	-1.49102429948374	0.00105754774103445	Down	0.000236280794683184	NA	NA	NA	NA	gi|460374487|ref|XP_004233042.1|//PREDICTED: uncharacterized protein LOC101247686 [Solanum lycopersicum]
Solyc03g119810.1.1	456	38.6224861470171	808.525087334833	4.38777959975491	3.19838868774608e-20	Up	5.77016596417587e-22	NA	NA	NA	NA	gi|460379975|ref|XP_004235734.1|//PREDICTED: uncharacterized protein LOC101258448 [Solanum lycopersicum]
Solyc05g041430.3.1	904	1140.06046848565	110.64579015792	-3.36508988080591	2.37390651024377e-10	Down	1.51753752239007e-11	NA	NA	NA	NA	gi|460389044|ref|XP_004240169.1|//PREDICTED: uncharacterized protein LOC101256186 [Solanum lycopersicum]
Solyc04g073940.3.1	2491	17.4852101812691	65.9779290880989	1.91584835729417	0.0462662142988794	Up	0.0170885611110629	NA	NA	NA	K09527//DnaJ homolog subfamily C member 7	gi|460385661|ref|XP_004238521.1|//PREDICTED: inactive TPR repeat-containing thioredoxin TTL3-like [Solanum lycopersicum]
Solyc01g079480.3.1	1231	1638.82184059382	3748.30412137362	1.19357898698544	6.29219122380706e-05	Up	1.05495288969301e-05	GO:0043231//intracellular membrane-bounded organelle	GO:0003677//DNA binding;GO:0005515//protein binding;GO:0043565//sequence-specific DNA binding;GO:0003700//transcription factor activity, sequence-specific DNA binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0006355//regulation of transcription, DNA-templated;GO:0006351//transcription, DNA-templated	K09060//plant G-box-binding factor	gi|350538355|ref|NP_001234339.1|//bZIP DNA-binding protein [Solanum lycopersicum]
Solyc05g013690.3.1	1473	528.045136497651	102.562922417751	-2.36415197857476	0.01561497085221	Down	0.00484490149745774	NA	GO:0016787//hydrolase activity	GO:0044238//primary metabolic process	K01206//alpha-L-fucosidase [EC:3.2.1.51]	gi|460386915|ref|XP_004239139.1|//PREDICTED: GDSL esterase/lipase At3g26430-like [Solanum lycopersicum]
Solyc09g066350.1.1	471	1.07373672662716	44.2782181662538	5.36588496448338	3.67662084186051e-08	Up	3.31098701130721e-09	NA	NA	NA	K09286//EREBP-like factor	gi|460403747|ref|XP_004247349.1|//PREDICTED: ethylene-responsive transcription factor ERF098-like [Solanum lycopersicum]
Solyc03g097650.3.1	1214	134.013457080067	57.098228303474	-1.2308599913363	0.00955694083269596	Down	0.00278037584610079	NA	NA	NA	K12581//CCR4-NOT transcription complex subunit 7/8;K13126//polyadenylate-binding protein;K01054//acylglycerol lipase [EC:3.1.1.23]	gi|460379442|ref|XP_004235471.1|//PREDICTED: NAC transcription factor 29 [Solanum lycopersicum]
Solyc02g082290.3.1	4494	10.3236662810272	64.4281545824314	2.64173586091544	0.000405245859559152	Up	8.16443220112277e-05	NA	NA	NA	NA	gi|723673338|ref|XP_010316493.1|//PREDICTED: MORC family CW-type zinc finger protein 2-like [Solanum lycopersicum]
Solyc03g097130.3.1	1743	989.120883941725	333.048322491289	-1.57041533327701	0.000242951460963174	Down	4.64929476884202e-05	NA	GO:0032559//adenyl ribonucleotide binding;GO:0016301//kinase activity	GO:0006464//cellular protein modification process	NA	gi|970013340|ref|XP_015067637.1|//PREDICTED: uncharacterized protein LOC107012336 [Solanum pennellii];gi|460379089|ref|XP_004235297.1|//PREDICTED: uncharacterized protein LOC101252261 [Solanum lycopersicum];gi|255558051|ref|XP_002520054.1|//PREDICTED: uncharacterized protein LOC8280489 [Ricinus communis]
Solyc01g086900.3.1	3177	902.695312989095	290.118638869429	-1.63759613115434	0.000619630025919284	Down	0.000130910354365234	NA	GO:0008173//RNA methyltransferase activity	GO:0016070//RNA metabolic process;GO:0010467//gene expression	K03216//tRNA (cytidine/uridine-2'-O-)-methyltransferase [EC:2.1.1.207]	gi|460367495|ref|XP_004229609.1|//PREDICTED: uncharacterized protein LOC101265962 isoform X1 [Solanum lycopersicum]
Solyc01g080780.2.1	3462	2196.23465829161	376.699054409954	-2.54354789143189	4.85442252250631e-09	Down	3.83062937235197e-10	NA	NA	NA	NA	gi|723659076|ref|XP_010323085.1|//PREDICTED: translocase of chloroplast 159, chloroplastic-like [Solanum lycopersicum]
BGI_novel_G000310	1120	4.80592109965135	29.1222630036223	2.59923759880526	0.00171621099320256	Up	0.000403144538510605	NA	NA	NA	NA	gi|565356100|ref|XP_006344910.1|//PREDICTED: high mobility group B protein 10 [Solanum tuberosum]
Solyc08g007000.3.1	3257	217.377314438085	64.0261732967905	-1.76346769718152	0.000146436133587473	Down	2.66639523100792e-05	NA	NA	NA	K01102//pyruvate dehydrogenase phosphatase [EC:3.1.3.43]	gi|460398304|ref|XP_004244702.1|//PREDICTED: protein phosphatase 2C 29 [Solanum lycopersicum]
Solyc01g100010.3.1	2589	287.876454988004	4605.51290213678	3.99984013104404	9.20094014620253e-11	Up	5.52166156082678e-12	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K16219//protein N-terminal methyltransferase [EC:2.1.1.244];K17600//vacuolar protein sorting-associated protein 54;K08235//xyloglucan:xyloglucosyl transferase [EC:2.4.1.207]	gi|460368829|ref|XP_004230267.1|//PREDICTED: F-box protein PP2-B15-like [Solanum lycopersicum]
Solyc03g111700.3.1	1296	1551.61958335467	232.716134993194	-2.73713174346094	1.59217324670683e-10	Down	9.91158215868666e-12	NA	NA	NA	NA	gi|460381123|ref|XP_004236302.1|//PREDICTED: uncharacterized protein LOC101254186 isoform X1 [Solanum lycopersicum]
Solyc01g098340.3.1	3157	65.6703178106061	20.1031333037357	-1.70782105767284	0.0476529680035176	Down	0.0176877983964152	NA	NA	NA	K09510//DnaJ homolog subfamily B member 4;K20283//golgin subfamily A member 4	gi|723662311|ref|XP_010312343.1|//PREDICTED: uncharacterized protein LOC104644401 isoform X1 [Solanum lycopersicum]
Solyc04g009440.3.1	1303	1828.85421841998	28834.2509450254	3.97877155989713	2.70076192100794e-34	Up	1.35903853934722e-36	NA	GO:0003676//nucleic acid binding	NA	K12581//CCR4-NOT transcription complex subunit 7/8;K03094//S-phase kinase-associated protein 1;K13126//polyadenylate-binding protein;K05941//glutathione gamma-glutamylcysteinyltransferase [EC:2.3.2.15];K01054//acylglycerol lipase [EC:3.1.1.23]	gi|350536035|ref|NP_001234482.1|//NAC domain protein [Solanum lycopersicum]
Solyc10g008200.3.1	1497	344.357162179709	22.405303960525	-3.94199347952472	4.1925497852564e-09	Down	3.27240168865621e-10	NA	GO:0016769//transferase activity, transferring nitrogenous groups;GO:0016846//carbon-sulfur lyase activity;GO:0008483//transaminase activity;GO:0048037//cofactor binding;GO:0003824//catalytic activity;GO:0030170//pyridoxal phosphate binding	GO:0008652//cellular amino acid biosynthetic process;GO:0008152//metabolic process;GO:0009058//biosynthetic process;GO:0006520//cellular amino acid metabolic process	K00815//tyrosine aminotransferase [EC:2.6.1.5]	gi|971584624|ref|XP_015160307.1|//PREDICTED: probable aminotransferase TAT2 [Solanum tuberosum];gi|723734211|ref|XP_010327084.1|//PREDICTED: tyrosine aminotransferase-like isoform X2 [Solanum lycopersicum];gi|698530038|ref|XP_009761836.1|//PREDICTED: probable aminotransferase TAT2 [Nicotiana sylvestris]
Solyc09g090710.3.1	7973	270.185878401165	2654.77822928449	3.29656717095141	7.85327122422748e-20	Up	1.50168784032678e-21	NA	NA	NA	K03039//26S proteasome regulatory subunit N9	gi|460404606|ref|XP_004247772.1|//PREDICTED: uncharacterized protein LOC101264673 [Solanum lycopersicum]
Solyc02g070920.3.1	4814	126.935381782456	16.937555687228	-2.90579666506398	0.000287083229450619	Down	5.58371958876297e-05	NA	NA	NA	K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|723675666|ref|XP_004233867.2|//PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2 [Solanum lycopersicum]
Solyc11g013895.1.1	285	0.595211099529624	32.4574085854112	5.76900257866191	5.34692191307596e-05	Up	8.82317851095395e-06	NA	NA	NA	NA	gi|723743171|ref|XP_010312920.1|//PREDICTED: F-box protein CPR30-like [Solanum lycopersicum]
Solyc02g069630.3.1	3534	376.525347192175	84.3118981547732	-2.1589388437101	0.00290882184293737	Down	0.000726880186188017	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13199//plasminogen activator inhibitor 1 RNA-binding protein;K12663//Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase [EC:5.3.3.-];K09338//homeobox-leucine zipper protein	gi|460374772|ref|XP_004233183.1|//PREDICTED: subtilisin-like protease [Solanum lycopersicum]
Solyc03g083130.2.1	4722	98.2740581585679	15.1677498634118	-2.69580355461392	1.01848597780049e-07	Down	9.92746694479012e-09	NA	NA	NA	NA	gi|723682193|ref|XP_010318021.1|//PREDICTED: uncharacterized protein LOC101253262 [Solanum lycopersicum]
Solyc06g053980.3.1	1067	697.307606272023	296.508280098117	-1.23372282561138	0.029833984252284	Down	0.0102330521503473	NA	NA	NA	K08099//chlorophyllase [EC:3.1.1.14]	gi|460390857|ref|XP_004241041.1|//PREDICTED: chlorophyllase-2, chloroplastic-like [Solanum lycopersicum]
Solyc08g063040.3.1	1957	1619.15696119858	587.753520711735	-1.46195966645896	1.88299926977955e-05	Down	2.83488670442806e-06	NA	NA	NA	K14794//ribosomal RNA-processing protein 12;K12309//beta-galactosidase [EC:3.2.1.23]	gi|970048431|ref|XP_015085741.1|//PREDICTED: protein indeterminate-domain 12-like [Solanum pennellii];gi|460399121|ref|XP_004245090.1|//PREDICTED: zinc finger protein NUTCRACKER [Solanum lycopersicum]
Solyc06g034150.3.1	2373	397.042652713375	146.947876052241	-1.4339894918974	0.00979253294652433	Down	0.00285621627801375	NA	GO:0003824//catalytic activity	NA	K00652//8-amino-7-oxononanoate synthase [EC:2.3.1.47]	gi|460390273|ref|XP_004240762.1|//PREDICTED: 2-amino-3-ketobutyrate coenzyme A ligase, mitochondrial isoform X1 [Solanum lycopersicum];gi|565383220|ref|XP_006357918.1|//PREDICTED: 8-amino-7-oxononanoate synthase [Solanum tuberosum]
Solyc02g084440.3.1	1458	148117.305239117	12468.5852555725	-3.570370522709	1.54398807540626e-37	Down	5.81268807276102e-40	GO:0009536//plastid	GO:0016829//lyase activity;GO:0016832//aldehyde-lyase activity	GO:0006007//glucose catabolic process	K01623//fructose-bisphosphate aldolase, class I [EC:4.1.2.13]	gi|629098295|gb|KCW64060.1|//hypothetical protein EUGRSUZ_G01726 [Eucalyptus grandis];gi|808175957|ref|NP_001294934.1|//fructose-bisphosphate aldolase 1, chloroplastic [Solanum lycopersicum]
Solyc01g100650.3.1	3824	4225.28629460127	1429.39998565135	-1.56363941913193	1.83427144127602e-12	Down	8.49858133854962e-14	NA	NA	NA	K20884;K17623//pseudouridine 5'-phosphatase [EC:3.1.3.96]	gi|460368929|ref|XP_004230317.1|//PREDICTED: NHL repeat-containing protein 2 isoform X2 [Solanum lycopersicum];gi|723663204|ref|XP_010313598.1|//PREDICTED: NHL repeat-containing protein 2 isoform X1 [Solanum lycopersicum]
Solyc07g065370.3.1	2752	2451.62794950679	5466.00738145059	1.15674735083841	0.000169730037696089	Up	3.14811639919389e-05	NA	NA	NA	NA	gi|460396980|ref|XP_004244047.1|//PREDICTED: uncharacterized protein LOC101252099 [Solanum lycopersicum]
Solyc03g026020.3.1	1633	750.38151976047	2008.68316774775	1.42055382080835	3.12874924298777e-05	Up	4.9305843723011e-06	NA	NA	NA	K09419//heat shock transcription factor, other eukaryote	gi|460377177|ref|XP_004234371.1|//PREDICTED: heat stress transcription factor B-2a [Solanum lycopersicum]
Solyc01g105160.3.1	4483	2707.06001070215	1261.73986692475	-1.10131236953805	0.0219596967055649	Down	0.00717938347265954	GO:0016020//membrane	GO:0046873//metal ion transmembrane transporter activity;GO:0015662//ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism;GO:0000166//nucleotide binding	GO:0008152//metabolic process;GO:0009987//cellular process;GO:0030001//metal ion transport	K01533//Cu2+-exporting ATPase [EC:3.6.3.4]	gi|460369361|ref|XP_004230531.1|//PREDICTED: copper-transporting ATPase PAA1, chloroplastic isoform X1 [Solanum lycopersicum]
Solyc02g090390.3.1	2144	638.974064321669	2570.81844100997	2.00839844716145	1.02969200414058e-14	Up	3.44663567809094e-16	NA	NA	NA	K14498//serine/threonine-protein kinase SRK2 [EC:2.7.11.1]	gi|460372475|ref|XP_004232055.1|//PREDICTED: serine/threonine-protein kinase SRK2I [Solanum lycopersicum]
Solyc07g044860.3.1	1307	77219.1805736402	19421.5379703282	-1.99130179420027	7.09651546645476e-12	Down	3.56836117647513e-13	GO:0009523//photosystem II;GO:0009534//chloroplast thylakoid	GO:0046872//metal ion binding	GO:0044237//cellular metabolic process	K02717//photosystem II oxygen-evolving enhancer protein 2	gi|929045135|ref|NP_001234109.2|//oxygen-evolving enhancer protein 2, chloroplastic [Solanum lycopersicum]
Solyc05g056080.3.1	1302	128.738910811078	2740.11429461158	4.41171599831356	8.17455364300798e-17	Up	2.13596321147629e-18	NA	NA	NA	NA	gi|460388025|ref|XP_004239672.1|//PREDICTED: uncharacterized protein LOC101253087 [Solanum lycopersicum]
Solyc06g048810.3.1	2261	407.223611727329	2092.78138468571	2.36152849361022	2.42662366961062e-09	Up	1.82439985895505e-10	GO:0016021//integral component of membrane	NA	NA	K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30]	gi|460390463|ref|XP_004240851.1|//PREDICTED: uncharacterized protein LOC101251191 [Solanum lycopersicum]
Solyc11g062190.2.1	1697	8718.18262020485	18445.733743363	1.08118784907295	6.31059929435824e-05	Up	1.05850964755524e-05	GO:0031224//intrinsic component of membrane;GO:0043231//intracellular membrane-bounded organelle;GO:0019866//organelle inner membrane	NA	GO:0006810//transport	K05863//solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31	gi|807066316|ref|NP_001293067.1|//ADP, ATP carrier protein, mitochondrial-like [Solanum lycopersicum];gi|807066340|ref|NP_001234018.2|//ADP/ATP translocator [Solanum lycopersicum]
Solyc12g009180.2.1	1104	712.879766085773	4409.23256867795	2.62879689698638	1.21751949701694e-30	Up	8.48651207477889e-33	NA	NA	NA	K09705//uncharacterized protein	gi|460412621|ref|XP_004251696.1|//PREDICTED: uncharacterized protein LOC101251550 [Solanum lycopersicum]
Solyc04g076730.1.1	228	2.92766021481014	104.207283302968	5.15356418072932	3.61964065474895e-12	Up	1.7479794724032e-13	NA	NA	NA	NA	gi|147795803|emb|CAN69783.1|//hypothetical protein VITISV_012616 [Vitis vinifera]
Solyc11g068790.2.1	987	2347.97004710726	296.733359359456	-2.98417497248504	9.95949777635446e-15	Down	3.32997968741239e-16	NA	NA	NA	K20815	gi|460411372|ref|XP_004251086.1|//PREDICTED: uncharacterized protein LOC101243761 [Solanum lycopersicum]
Solyc03g119700.3.1	710	5979.68222482102	445.943107806898	-3.74513724612025	6.7315130311072e-22	Down	1.03125535104557e-23	NA	NA	GO:0009057//macromolecule catabolic process	K06891//ATP-dependent Clp protease adaptor protein ClpS	gi|565349290|ref|XP_006341627.1|//PREDICTED: ATP-dependent Clp protease adapter protein CLPS1, chloroplastic [Solanum tuberosum]
Solyc03g080190.3.1	1655	422.985029059019	28117.5699135128	6.05472150119276	7.53876674309401e-41	Up	2.19182870866756e-43	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K00475//naringenin 3-dioxygenase [EC:1.14.11.9]	gi|927669060|ref|NP_001233840.2|//flavonoid biosynthesis oxidoreductase protein [Solanum lycopersicum]
BGI_novel_G000262	2001	511.431770216548	1152.35287953543	1.17196888516727	0.00803529301513922	Up	0.00228437378211074	NA	NA	NA	K02261//cytochrome c oxidase subunit 2	gi|969998798|ref|XP_015077441.1|//PREDICTED: uncharacterized protein LOC107021314 [Solanum pennellii]
Solyc02g062355.1.1	300	0.714629227765025	10.4001578928578	3.86326670077344	0.00460240990145042	Up	0.00121836570449161	NA	NA	NA	K00430//peroxidase [EC:1.11.1.7]	gi|970000038|ref|XP_015086093.1|//PREDICTED: vacuolar iron transporter homolog 4-like [Solanum pennellii]
Solyc04g078520.3.1	1064	70.4473745380252	12.442389906687	-2.50128231882722	0.000538210286354554	Down	0.000111782753674056	NA	NA	NA	NA	gi|723695256|ref|XP_010320317.1|//PREDICTED: uncharacterized protein LOC101246050 [Solanum lycopersicum]
Solyc02g067800.3.1	1970	9.28008586918623	1178.28733224877	6.98833752158829	4.47112455301324e-50	Up	6.16637872601349e-53	NA	NA	NA	K13944	gi|460375060|ref|XP_004233326.1|//PREDICTED: LOB domain-containing protein 25 [Solanum lycopersicum]
Solyc01g099630.3.1	1404	1926.39753014144	161.103552098161	-3.57984523868639	1.05780132824484e-08	Down	8.76112476278531e-10	GO:0030312//external encapsulating structure;GO:0005576//extracellular region	GO:0016758//transferase activity, transferring hexosyl groups;GO:0016798//hydrolase activity, acting on glycosyl bonds	GO:0045229//external encapsulating structure organization;GO:0044042//glucan metabolic process	K08235//xyloglucan:xyloglucosyl transferase [EC:2.4.1.207]	gi|350540046|ref|NP_001233858.1|//probable xyloglucan endotransglucosylase/hydrolase 1 precursor [Solanum lycopersicum]
Solyc07g066340.3.1	3071	88.0511249164002	32.5149286124306	-1.43723917934181	0.00920837239162123	Down	0.00266283134488277	NA	NA	NA	K18213//proteinaceous RNase P [EC:3.1.26.5]	gi|723717796|ref|XP_010324219.1|//PREDICTED: methyltransferase-like protein 25 isoform X3 [Solanum lycopersicum];gi|460396868|ref|XP_004243992.1|//PREDICTED: methyltransferase-like protein 25 isoform X1 [Solanum lycopersicum]
Solyc03g114900.3.1	6235	26.0317412978696	180.471211617048	2.79342499595196	3.84197310792557e-11	Up	2.17532322608429e-12	NA	NA	NA	NA	gi|460380651|ref|XP_004236068.1|//PREDICTED: COBRA-like protein 4 [Solanum lycopersicum]
Solyc12g006730.1.1	237	89.3814110005477	0.931457027533095	-6.58434179704856	2.3794976299067e-06	Down	3.00231082348076e-07	NA	NA	NA	NA	NA
Solyc08g082670.3.1	4594	2655.79457093574	387.286554537756	-2.77767023554265	8.19612435453732e-13	Down	3.61108505556251e-14	GO:0016020//membrane	GO:0016757//transferase activity, transferring glycosyl groups	GO:0009987//cellular process	K10999//cellulose synthase A [EC:2.4.1.12]	gi|970048176|ref|XP_015085630.1|//PREDICTED: cellulose synthase-like protein G2 [Solanum pennellii];gi|460399948|ref|XP_004245498.1|//PREDICTED: cellulose synthase-like protein G3 [Solanum lycopersicum];gi|147805394|emb|CAN71948.1|//hypothetical protein VITISV_005381 [Vitis vinifera]
Solyc08g080860.3.1	1324	48.7073728870822	138.703799577083	1.50979523237244	0.0062329242885875	Up	0.00171680047396277	NA	NA	NA	NA	gi|460400185|ref|XP_004245616.1|//PREDICTED: uncharacterized protein LOC101261438 [Solanum lycopersicum]
Solyc07g063170.1.1	507	55.4510045480638	159.396286822472	1.52333252022854	1.79446273620166e-05	Up	2.688884821653e-06	NA	NA	NA	NA	gi|460397346|ref|XP_004244228.1|//PREDICTED: PH domain-containing protein YHR131C-like [Solanum lycopersicum]
Solyc03g097280.3.1	3460	244.597346964102	1168.66006043154	2.25637467928392	2.40162061883836e-05	Up	3.70161818208461e-06	NA	NA	NA	K01872//alanyl-tRNA synthetase [EC:6.1.1.7];K17583//nucleolar MIF4G domain-containing protein 1	gi|460379059|ref|XP_004235282.1|//PREDICTED: nucleolar MIF4G domain-containing protein 1 [Solanum lycopersicum]
Solyc08g067510.1.1	369	15.1203898330745	1.20770858936965	-3.646151044779	0.00779591366111111	Down	0.00220818353626	NA	NA	NA	NA	gi|460399382|ref|XP_004245220.1|//PREDICTED: non-specific lipid-transfer protein 1-like [Solanum lycopersicum]
Solyc04g076390.3.1	2039	1577.5714527767	541.619124996484	-1.54235476290192	3.05314440194053e-08	Down	2.70285446347426e-09	NA	NA	NA	K01883//cysteinyl-tRNA synthetase [EC:6.1.1.16]	gi|460384608|ref|XP_004238002.1|//PREDICTED: cysteine--tRNA ligase, cytoplasmic [Solanum lycopersicum];gi|698563956|ref|XP_009772853.1|//PREDICTED: cysteine--tRNA ligase, cytoplasmic isoform X2 [Nicotiana sylvestris]
Solyc07g014600.2.1	640	30.5198542014155	2.60960101227911	-3.54784691828214	0.000534711777745125	Down	0.000110876756358884	NA	NA	NA	NA	gi|970012770|ref|XP_015067334.1|//PREDICTED: uncharacterized protein LOC107012110 isoform X2 [Solanum pennellii]
Solyc04g079870.2.1	1887	0.385278627611266	4.14531375703811	3.42750723947486	0.0489386850053174	Up	0.018236172431719	NA	NA	NA	K01875//seryl-tRNA synthetase [EC:6.1.1.11]	gi|970023509|ref|XP_015073090.1|//PREDICTED: serine--tRNA ligase-like [Solanum pennellii]
Solyc08g069065.1.1	1550	388.510545854947	4607.60346564633	3.56799089728073	1.30678048781803e-10	Up	8.02733801969626e-12	GO:0031224//intrinsic component of membrane;GO:0043231//intracellular membrane-bounded organelle	GO:0016758//transferase activity, transferring hexosyl groups	GO:0006464//cellular protein modification process	K06638//mitotic spindle assembly checkpoint protein MAD1;K20855;K00734//galactosylxylosylprotein 3-beta-galactosyltransferase [EC:2.4.1.134]	gi|460399556|ref|XP_004245304.1|//PREDICTED: beta-1,3-galactosyltransferase 7-like [Solanum lycopersicum];gi|970044439|ref|XP_015083636.1|//PREDICTED: beta-1,3-galactosyltransferase 7-like [Solanum pennellii]
Solyc06g007930.3.1	1248	716.588757612663	5683.03786348394	2.98744501269295	6.46087977473828e-20	Up	1.21857953109347e-21	NA	GO:0060089//molecular transducer activity	GO:0009314//response to radiation;GO:0023052//signaling	K10534//nitrate reductase (NAD(P)H) [EC:1.7.1.1 1.7.1.2 1.7.1.3]	gi|460390000|ref|XP_004240632.1|//PREDICTED: BTB/POZ domain-containing protein At5g48800-like [Solanum lycopersicum];gi|460389642|ref|XP_004240459.1|//PREDICTED: cytochrome b5-like [Solanum lycopersicum]
Solyc06g072160.3.1	1410	322.18957359407	729.053820968086	1.17811551499958	7.7989896306014e-05	Up	1.32909574292193e-05	NA	GO:0046914//transition metal ion binding;GO:0003824//catalytic activity	GO:0008152//metabolic process	K00001//alcohol dehydrogenase [EC:1.1.1.1]	gi|460391750|ref|XP_004241482.1|//PREDICTED: alcohol dehydrogenase-like 6 [Solanum lycopersicum]
Solyc02g089495.1.1	3616	161.60831934219	724.846636564218	2.16517431355943	0.0035149737571466	Up	0.00090042237845662	GO:0044464//cell part	GO:0046914//transition metal ion binding	NA	K12135//zinc finger protein CONSTANS	gi|45544885|gb|AAS67378.1|//CONSTANS 2 [Solanum lycopersicum]
Solyc02g067560.1.1	1812	140.210677477966	682.449503674704	2.28312608175339	6.89684777207234e-06	Up	9.50983374204691e-07	GO:0016020//membrane	GO:0016301//kinase activity	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460375092|ref|XP_004233342.1|//PREDICTED: probable inactive receptor kinase At1g27190 [Solanum lycopersicum]
Solyc12g008940.2.1	1937	1711.79947737923	3656.33487565579	1.09488449741594	0.000351298845142423	Up	6.96888494799454e-05	GO:0043231//intracellular membrane-bounded organelle	NA	GO:0034728//nucleosome organization	K11279//nucleosome assembly protein 1-like 1	gi|460412576|ref|XP_004251674.1|//PREDICTED: nucleosome assembly protein 1;2 [Solanum lycopersicum]
Solyc01g111120.3.1	1432	5727.4424486883	2305.56152140432	-1.31277289389357	2.42898160378159e-08	Down	2.1149921822103e-09	GO:0009536//plastid	GO:0016861//intramolecular oxidoreductase activity, interconverting aldoses and ketoses	GO:0015977//carbon fixation	K01803//triosephosphate isomerase (TIM) [EC:5.3.1.1]	gi|460370086|ref|XP_004230885.1|//PREDICTED: triosephosphate isomerase, chloroplastic [Solanum lycopersicum]
Solyc01g094330.3.1	4180	198.040339700407	880.056100121749	2.15180116374406	7.69526655642063e-09	Up	6.23870760407592e-10	NA	NA	NA	NA	gi|971536695|ref|XP_006339537.2|//PREDICTED: uncharacterized protein LOC102583787 isoform X1 [Solanum tuberosum];gi|723660968|ref|XP_010326218.1|//PREDICTED: uncharacterized protein LOC101260881 [Solanum lycopersicum]
Solyc02g085750.3.1	1180	148.93430864623	31.0936505202034	-2.25998422281788	0.0287380560881502	Down	0.00979394836789763	NA	NA	NA	NA	gi|723672086|ref|XP_004233714.2|//PREDICTED: uncharacterized protein LOC101255558 [Solanum lycopersicum]
Solyc01g073660.3.1	3051	557.712567951213	3182.59605855601	2.51261037153139	8.93953232770913e-22	Up	1.39950931028695e-23	GO:0016021//integral component of membrane	NA	NA	NA	gi|460366940|ref|XP_004229333.1|//PREDICTED: major facilitator superfamily domain-containing protein 12 [Solanum lycopersicum];gi|697133636|ref|XP_009620863.1|//PREDICTED: major facilitator superfamily domain-containing protein 12-like isoform X1 [Nicotiana tomentosiformis]
Solyc08g078650.3.1	2010	26.7513784404456	2145.31931420097	6.32543535511759	5.02736202134182e-23	Up	6.89603855618678e-25	NA	GO:0016740//transferase activity	NA	K00750//glycogenin glucosyltransferase [EC:2.4.1.186]	gi|460400487|ref|XP_004245766.1|//PREDICTED: putative glucuronosyltransferase PGSIP8 [Solanum lycopersicum]
Solyc02g068890.3.1	2284	8.69805278340429	0.662392555808473	-3.71493409915621	0.0310841367896352	Down	0.0107383248757395	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial	gi|460376226|ref|XP_004233900.1|//PREDICTED: pentatricopeptide repeat-containing protein At4g19890 [Solanum lycopersicum]
Solyc03g007740.3.1	1695	2113.36891598634	7394.16715058824	1.80684302666732	4.90107242751078e-06	Up	6.54377569529731e-07	GO:0043231//intracellular membrane-bounded organelle	NA	NA	K20721;K20723//null	gi|460376840|ref|XP_004234204.1|//PREDICTED: reticulon-like protein B2 [Solanum lycopersicum]
Solyc04g082220.2.1	1069	424.719039794695	3688.11033955982	3.11830112840076	9.19924454290289e-07	Up	1.06915329076976e-07	GO:0031224//intrinsic component of membrane	NA	NA	K19476//vacuolar protein sorting-associated protein IST1;K14209//solute carrier family 36 (proton-coupled amino acid transporter);K15015//solute carrier family 32 (vesicular inhibitory amino acid transporter)	gi|723696230|ref|XP_004238627.2|//PREDICTED: lysine histidine transporter-like 8 [Solanum lycopersicum]
Solyc06g075340.3.1	3757	3406.88502888661	1014.14162749565	-1.748194119568	0.000233448917555892	Down	4.44743334437217e-05	NA	NA	NA	K01955//carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]	gi|460391306|ref|XP_004241264.1|//PREDICTED: carbamoyl-phosphate synthase large chain, chloroplastic [Solanum lycopersicum];gi|971583611|ref|XP_006365761.2|//PREDICTED: carbamoyl-phosphate synthase large chain, chloroplastic, partial [Solanum tuberosum]
Solyc09g018280.1.1	1332	555.717945371007	2389.62370015329	2.10435871740894	0.000566535731219021	Up	0.000118404869723612	NA	GO:0000166//nucleotide binding;GO:0004672//protein kinase activity	GO:0009987//cellular process	K12761//carbon catabolite-derepressing protein kinase [EC:2.7.11.1]	gi|460401515|ref|XP_004246268.1|//PREDICTED: CBL-interacting serine/threonine-protein kinase 14 [Solanum lycopersicum]
Solyc03g116730.3.1	2794	5734.83770011301	288.527395236852	-4.3129724453636	6.90392126434857e-17	Down	1.79366077279371e-18	NA	NA	NA	K20416//palmitoyl-[glycerolipid] 7-desaturase [EC:1.14.19.42]	gi|460380419|ref|XP_004235954.1|//PREDICTED: palmitoyl-monogalactosyldiacylglycerol delta-7 desaturase, chloroplastic [Solanum lycopersicum]
Solyc05g052200.3.1	3056	586.046900967596	1486.73957616612	1.34306392835708	0.000122120943715763	Up	2.17904039647889e-05	NA	NA	NA	K08876//SCY1-like protein 1	gi|723702120|ref|XP_010321457.1|//PREDICTED: probable inactive serine/threonine-protein kinase scy1 [Solanum lycopersicum]
Solyc11g069570.2.1	1417	1230.58986308686	523.160306478009	-1.23402502447652	0.0254296131405328	Down	0.00851950808510171	NA	NA	NA	K06966//uncharacterized protein	gi|460411499|ref|XP_004251148.1|//PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 [Solanum lycopersicum]
Solyc02g069780.3.1	3564	2042.17844079543	929.112947110353	-1.13618303823586	9.10160689543756e-05	Down	1.5738166985215e-05	NA	NA	NA	K15501//serine/threonine-protein phosphatase 6 regulatory subunit 3	gi|460374753|ref|XP_004233174.1|//PREDICTED: serine/threonine-protein phosphatase 6 regulatory subunit 3 [Solanum lycopersicum]
Solyc04g072900.1.1	795	1534.64752154222	10301.568832266	2.74688482307646	2.99260102108607e-15	Up	9.32538561811523e-17	NA	NA	NA	K09286//EREBP-like factor	gi|350535453|ref|NP_001234707.1|//dehydration-responsive element binding protein 3 [Solanum lycopersicum]
Solyc03g114360.3.1	2255	14.1411833006391	1256.11373911299	6.47292044718018	3.42556554806474e-11	Up	1.92423113200148e-12	NA	NA	NA	NA	gi|460380723|ref|XP_004236104.1|//PREDICTED: probable inactive poly [ADP-ribose] polymerase SRO5 isoform X2 [Solanum lycopersicum]
Solyc06g053550.3.1	1085	18.6121122842621	121.859762344097	2.71090813094415	1.19421408274972e-09	Up	8.55108563054352e-11	GO:0031224//intrinsic component of membrane	NA	NA	K13347//peroxisomal membrane protein 2	gi|460390787|ref|XP_004241006.1|//PREDICTED: peroxisomal membrane protein PMP22 [Solanum lycopersicum]
Solyc03g113710.3.1	1998	1.11616313783231	55.0162595017427	5.62323824439417	9.11066622406514e-09	Up	7.46430757436081e-10	NA	NA	NA	K18875//enhanced disease susceptibility 1 protein;K05740;K19984//exocyst complex component 5;K02184//formin 2	gi|460381560|ref|XP_004236516.1|//PREDICTED: formin-like protein 4 [Solanum lycopersicum]
Solyc04g026315.1.1	1336	293.038386320886	69.3920379898784	-2.07824761841439	2.91839735283525e-07	Down	3.08831447916329e-08	NA	NA	NA	NA	gi|970049921|ref|XP_015086478.1|//PREDICTED: activating signal cointegrator 1 [Solanum pennellii];gi|723743574|ref|XP_010312993.1|//PREDICTED: uncharacterized protein LOC101261775 [Solanum lycopersicum]
Solyc03g110980.3.1	3384	127.640198552326	54.196843346185	-1.23580202746794	0.0466753746835216	Down	0.0172675225038747	NA	NA	NA	K15356//GDP-mannose transporter	gi|460381226|ref|XP_004236353.1|//PREDICTED: GDP-mannose transporter GONST3-like [Solanum lycopersicum]
Solyc09g011320.3.1	3135	361.823449198866	927.724278151628	1.3584101869335	0.000633119813698115	Up	0.000134043556799064	NA	NA	NA	K08269//serine/threonine-protein kinase ULK/ATG1 [EC:2.7.11.1]	gi|723727278|ref|XP_010325831.1|//PREDICTED: serine/threonine-protein kinase ATG1 isoform X2 [Solanum lycopersicum]
Solyc06g074010.3.1	3592	222.883529861639	469.837320222435	1.07587130282354	0.00234463634035783	Up	0.000570165777713377	NA	NA	NA	K06620//transcription factor E2F3	gi|460391469|ref|XP_004241343.1|//PREDICTED: transcription factor E2FB-like isoform X1 [Solanum lycopersicum]
Solyc03g122030.1.1	1092	431.267441487984	1558.74706491737	1.85373213438541	5.00984546753754e-11	Up	2.88512421624627e-12	NA	NA	NA	K09903//uridylate kinase [EC:2.7.4.22]	gi|460379636|ref|XP_004235567.1|//PREDICTED: trihelix transcription factor ASIL2 [Solanum lycopersicum]
Solyc03g118060.3.1	1034	43.7640752641415	1.54706689284332	-4.82213960340372	0.000140421962547426	Down	2.5443236914531e-05	NA	NA	NA	NA	gi|460380225|ref|XP_004235858.1|//PREDICTED: uncharacterized protein LOC101246122 [Solanum lycopersicum]
Solyc09g082890.2.1	1149	12.4265520668842	90.4418761013346	2.86356486471522	0.0011699570289214	Up	0.000264099439658117	GO:0016020//membrane	GO:0046873//metal ion transmembrane transporter activity;GO:0042625//ATPase coupled ion transmembrane transporter activity;GO:0000166//nucleotide binding	GO:0008152//metabolic process;GO:0006816//calcium ion transport;GO:0009987//cellular process	K01537//Ca2+-transporting ATPase [EC:3.6.3.8]	gi|970050410|ref|XP_015086720.1|//PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type [Solanum pennellii]
Solyc12g089040.2.1	1139	1073.07894797993	3421.87005911159	1.67302875530121	0.000113926048554191	Up	2.01922752674512e-05	NA	NA	NA	K14503//brassinosteroid resistant 1/2	gi|906847321|ref|NP_001234745.2|//mature anther-specific protein LAT61 [Solanum lycopersicum]
BGI_novel_G000064	3499	232.151361615813	73.9039554184194	-1.65134225650873	0.0018424388004587	Down	0.000436504436250019	GO:0005840//ribosome;GO:0005739//mitochondrion	GO:0003735//structural constituent of ribosome	GO:0006412//translation	K01184//polygalacturonase [EC:3.2.1.15];K03469//ribonuclease HI [EC:3.1.26.4]	gi|971560354|ref|XP_015166668.1|//PREDICTED: uncharacterized mitochondrial protein AtMg00310-like [Solanum tuberosum]
Solyc11g007000.2.1	1864	213.875002638819	74.2543966220532	-1.5262195166128	8.26951219061281e-07	Down	9.50309605026812e-08	GO:0016020//membrane	NA	GO:0065003//macromolecular complex assembly	K02259//cytochrome c oxidase assembly protein subunit 15	gi|460409080|ref|XP_004249968.1|//PREDICTED: cytochrome c oxidase assembly protein COX15 [Solanum lycopersicum]
Solyc08g082180.3.1	1274	735.856825343331	168.562297320531	-2.12614320862066	8.65773407173664e-10	Down	6.0895870707347e-11	NA	NA	NA	K14496//abscisic acid receptor PYR/PYL family	gi|460399998|ref|XP_004245523.1|//PREDICTED: abscisic acid receptor PYL9 [Solanum lycopersicum]
Solyc01g096530.3.1	1464	211.04243304556	448.390696505394	1.08722324230119	0.014430235913125	Up	0.00442459820416602	NA	GO:0005506//iron ion binding;GO:0009975//cyclase activity	GO:0006164//purine nucleotide biosynthetic process	K20302//trafficking protein particle complex subunit 3	gi|460368366|ref|XP_004230038.1|//PREDICTED: trafficking protein particle complex subunit 3-like [Solanum lycopersicum]
Solyc07g043550.3.1	2176	121.996599296239	1738.61746235401	3.83302770219945	6.24776565835693e-26	Up	6.42755077421542e-28	NA	NA	NA	K12448//UDP-arabinose 4-epimerase [EC:5.1.3.5]	gi|460396135|ref|XP_004243634.1|//PREDICTED: UDP-arabinose 4-epimerase 1 [Solanum lycopersicum]
Solyc12g013820.2.1	3909	57.1440911507044	207.220079901758	1.85848757606585	3.84393478443991e-06	Up	5.02771997860431e-07	GO:0005737//cytoplasm	GO:0061630//ubiquitin protein ligase activity;GO:0031625//ubiquitin protein ligase binding	GO:0016567//protein ubiquitination	K10581//ubiquitin-conjugating enzyme E2 O [EC:2.3.2.24]	gi|460413472|ref|XP_004252112.1|//PREDICTED: uncharacterized protein LOC101261893 isoform X2 [Solanum lycopersicum]
Solyc10g005950.3.1	1573	223.894077726824	832.442332543882	1.89453396528257	1.3111075587442e-05	Up	1.90498630683797e-06	NA	NA	NA	NA	gi|460405747|ref|XP_004248336.1|//PREDICTED: nudix hydrolase 2-like [Solanum lycopersicum]
Solyc06g072510.3.1	1506	99.2772785227755	45.6987034751365	-1.11931033262465	0.0391666002832123	Down	0.0140283234725431	GO:0031224//intrinsic component of membrane	NA	NA	K15102//solute carrier family 25 (mitochondrial phosphate transporter), member 3	gi|970034624|ref|XP_015078638.1|//PREDICTED: mitochondrial phosphate carrier protein 3, mitochondrial-like [Solanum pennellii];gi|723708131|ref|XP_010322509.1|//PREDICTED: N-alpha-acetyltransferase 40 [Solanum lycopersicum]
Solyc09g074630.3.1	4654	109.677015967351	15.4113979632423	-2.83119158536967	0.00489110200889443	Down	0.00130426956059456	NA	GO:0060089//molecular transducer activity	GO:0009314//response to radiation;GO:0023052//signaling	K10523//speckle-type POZ protein	gi|460403957|ref|XP_004247452.1|//PREDICTED: BTB/POZ domain-containing protein At1g03010 isoform X1 [Solanum lycopersicum]
Solyc06g054010.3.1	2703	215.254162692479	36.0278047162369	-2.57885848569201	3.4089584335704e-09	Down	2.62139602223637e-10	NA	GO:0016791//phosphatase activity	NA	K20279//synaptojanin [EC:3.1.3.36]	gi|350537175|ref|NP_001233772.1|//inositol-1,4,5-triphosphate-5-phosphatase [Solanum lycopersicum]
Solyc09g011830.3.1	2111	1073.36943325058	268.686365023448	-1.99815169348668	5.5824057248144e-09	Down	4.44461705240926e-10	NA	NA	NA	K11292//transcription elongation factor SPT6;K18577//mannosylglycoprotein endo-beta-mannosidase [EC:3.2.1.152]	gi|460401718|ref|XP_004246364.1|//PREDICTED: uncharacterized protein LOC101260563 [Solanum lycopersicum]
Solyc01g006330.3.1	1568	1636.62203250369	249.574617148782	-2.71317806073749	2.73653661226535e-08	Down	2.40217076259315e-09	GO:0009536//plastid	NA	NA	K17637//exocyst complex component 2	gi|723655820|ref|XP_010316007.1|//PREDICTED: probable plastid-lipid-associated protein 12, chloroplastic [Solanum lycopersicum]
Solyc03g115740.2.1	2484	1054.92231389235	2501.48968839331	1.24565074473072	0.00294512718497485	Up	0.000736830686803012	GO:0031224//intrinsic component of membrane	GO:0042285//xylosyltransferase activity	NA	K08238//xyloglucan 6-xylosyltransferase [EC:2.4.2.39]	gi|723686829|ref|XP_010318819.1|//PREDICTED: putative glycosyltransferase 5 [Solanum lycopersicum]
BGI_novel_G000474	1029	1040.31719890126	13486.862315942	3.6964593611548	5.41969355139581e-06	Up	7.30490975169496e-07	NA	NA	NA	NA	gi|723746607|ref|XP_010313549.1|//PREDICTED: zinc finger protein ZAT11-like [Solanum lycopersicum]
Solyc02g080270.3.1	1221	391.491937890628	939.863047691627	1.26346795156873	0.000987155580713572	Up	0.000219044922170415	GO:0000813//ESCRT I complex;GO:0016021//integral component of membrane	GO:0032403//protein complex binding	GO:0043328//protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway	K12184//ESCRT-I complex subunit VPS28	gi|460373854|ref|XP_004232728.1|//PREDICTED: vacuolar protein sorting-associated protein 28 homolog 2 isoform X1 [Solanum lycopersicum]
Solyc08g076420.3.1	5636	5951.74714576473	21532.3502507975	1.85512065655921	1.99393298668347e-05	Up	3.01825028288414e-06	NA	NA	NA	K13459//disease resistance protein RPS2	gi|723725666|ref|XP_010325572.1|//PREDICTED: inactive poly [ADP-ribose] polymerase RCD1-like isoform X2 [Solanum lycopersicum];gi|460400828|ref|XP_004245934.1|//PREDICTED: inactive poly [ADP-ribose] polymerase RCD1-like isoform X1 [Solanum lycopersicum]
Solyc01g060280.3.1	2112	341.791413671787	873.414997133079	1.35355114865018	0.0103536277117566	Up	0.00303762500817193	NA	NA	NA	K11866//STAM-binding protein [EC:3.4.19.12]	gi|460366239|ref|XP_004228996.1|//PREDICTED: AMSH-like ubiquitin thioesterase 3 [Solanum lycopersicum]
Solyc12g009450.2.1	3266	48.6107536197132	280.267320646063	2.52745612925875	0.000134256928622163	Up	2.42260992791073e-05	NA	NA	NA	K13453;K13457//disease resistance protein RPM1	gi|723747873|ref|XP_004252073.2|//PREDICTED: putative late blight resistance protein homolog R1B-16 [Solanum lycopersicum]
BGI_novel_G000227	3915	172.708707739292	56.3809752065438	-1.61506048628758	0.0295199046385955	Down	0.0101011154235242	NA	NA	NA	NA	NA
Solyc09g091010.3.1	929	1215.23471441781	423.23105768459	-1.52171758281054	5.41542019678472e-06	Down	7.29511278931713e-07	NA	NA	NA	NA	gi|460404656|ref|XP_004247797.1|//PREDICTED: uncharacterized protein LOC101246964 [Solanum lycopersicum]
Solyc06g050520.2.1	1831	59.7482127382504	4.90606269045336	-3.60625798396322	8.67935967276464e-05	Down	1.49659750433164e-05	GO:0043231//intracellular membrane-bounded organelle;GO:0005634//nucleus	GO:0043565//sequence-specific DNA binding;GO:0003700//transcription factor activity, sequence-specific DNA binding;GO:0044212//transcription regulatory region DNA binding;GO:0001071//nucleic acid binding transcription factor activity;GO:0003676//nucleic acid binding	GO:0006351//transcription, DNA-templated;GO:0045893//positive regulation of transcription, DNA-templated	K09286//EREBP-like factor	gi|350535124|ref|NP_001234689.1|//dehydration responsive element binding protein [Solanum lycopersicum]
Solyc03g097930.3.1	763	16.5462035651531	142.291898052492	3.10428137697953	4.83768192231204e-09	Up	3.81561612778152e-10	NA	NA	NA	NA	gi|460379061|ref|XP_004235283.1|//PREDICTED: potassium channel SKOR-like [Solanum lycopersicum]
Solyc12g008830.2.1	1298	469.476860765029	13.7288624601226	-5.09577005574822	2.46748378024353e-15	Down	7.62466100276534e-17	NA	NA	NA	K17895//GATA-binding protein 3	gi|460412562|ref|XP_004251667.1|//PREDICTED: putative GATA transcription factor 22 [Solanum lycopersicum]
Solyc05g051050.3.1	2119	113.092315430809	229.166961762175	1.01889816833112	0.0215243346241086	Up	0.00701218575103399	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process	K00924;K03083//glycogen synthase kinase 3 beta [EC:2.7.11.26]	gi|460388777|ref|XP_004240041.1|//PREDICTED: shaggy-related protein kinase epsilon [Solanum lycopersicum]
Solyc05g052820.3.1	2035	251.280182180291	41.7404610302371	-2.58977845356749	5.60192991614613e-10	Down	3.82120610800187e-11	GO:0031224//intrinsic component of membrane;GO:0016021//integral component of membrane	NA	NA	K14209//solute carrier family 36 (proton-coupled amino acid transporter);K15015//solute carrier family 32 (vesicular inhibitory amino acid transporter)	gi|698563448|ref|XP_009772700.1|//PREDICTED: proline transporter 2-like [Nicotiana sylvestris];gi|350536507|ref|NP_001233994.1|//proline transporter 3 [Solanum lycopersicum];gi|723700847|ref|XP_010321290.1|//PREDICTED: proline transporter 3 isoform X1 [Solanum lycopersicum]
Solyc06g082590.1.1	747	419.985812387626	1531.15897693047	1.86621158462562	0.000193659530179049	Up	3.63454500690141e-05	GO:0043231//intracellular membrane-bounded organelle	GO:0001071//nucleic acid binding transcription factor activity;GO:0003676//nucleic acid binding	GO:0006950//response to stress;GO:0006351//transcription, DNA-templated	K13434//pathogenesis-related genes transcriptional activator PTI6	gi|350536443|ref|NP_001233991.1|//pathogenesis-related genes transcriptional activator PTI6 [Solanum lycopersicum]
Solyc06g059860.3.1	1230	352.94150359525	1211.53789127813	1.77933852965827	0.00292970254118095	Up	0.000732316432129098	NA	NA	NA	NA	gi|460392908|ref|XP_004242054.1|//PREDICTED: hybrid signal transduction histidine kinase K [Solanum lycopersicum]
Solyc05g008200.3.1	6559	1329.97360973773	2992.08846761357	1.16975521322676	0.00712803473432546	Up	0.00199973194706258	NA	NA	NA	K00921//1-phosphatidylinositol-3-phosphate 5-kinase [EC:2.7.1.150]	gi|723697605|ref|XP_010320710.1|//PREDICTED: putative 1-phosphatidylinositol-3-phosphate 5-kinase FAB1C [Solanum lycopersicum]
Solyc04g040190.1.1	1503	916.019260346332	15.2145619571021	-5.91185323005651	0.000121794811291579	Down	2.17140518267341e-05	GO:0009536//plastid	GO:0016491//oxidoreductase activity	GO:0016109//tetraterpenoid biosynthetic process	K06443//lycopene beta-cyclase [EC:5.5.1.19]	gi|350539627|ref|NP_001234226.1|//lycopene beta cyclase, chloroplastic [Solanum lycopersicum]
Solyc02g089330.3.1	1183	0.735731341541176	11.4765486825392	3.9633659882065	0.00358207249305757	Up	0.000920753388703034	GO:0009536//plastid	GO:0016779//nucleotidyltransferase activity	NA	K10908//DNA-directed RNA polymerase, mitochondrial [EC:2.7.7.6]	gi|460372622|ref|XP_004232127.1|//PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase 2B, chloroplastic/mitochondrial [Solanum lycopersicum]
Solyc02g082010.2.1	1594	413.986871117704	158.539078915024	-1.38474651613581	0.00178202146365731	Down	0.000420397116575485	NA	NA	NA	K15032//mTERF domain-containing protein, mitochondrial	gi|460373624|ref|XP_004232615.1|//PREDICTED: uncharacterized protein LOC101249514 [Solanum lycopersicum]
Solyc06g072350.3.1	827	3895.6750756453	8064.42180866976	1.04969774841852	0.0100229341188376	Up	0.00293201084555829	NA	NA	NA	NA	gi|460391726|ref|XP_004241470.1|//PREDICTED: CASP-like protein 4D1 [Solanum lycopersicum]
BGI_novel_G000499	1465	67.9878447025412	21.1160289591708	-1.68693828558261	0.0162348588641375	Down	0.00505902117579355	NA	NA	NA	NA	gi|971559241|ref|XP_006352377.2|//PREDICTED: serine/threonine-protein kinase HT1-like [Solanum tuberosum]
Solyc05g050620.2.1	647	141.787571851167	11.9245361761707	-3.57172602462235	0.000334959141783862	Down	6.61852695167829e-05	NA	NA	NA	K03255//protein TIF31	gi|723702471|ref|XP_010321501.1|//PREDICTED: clustered mitochondria protein homolog isoform X1 [Solanum lycopersicum]
Solyc02g071780.3.1	1992	469.192556707297	2881.55342274648	2.6185947352319	3.48704916016101e-13	Up	1.45185400026086e-14	NA	NA	NA	K01183//chitinase [EC:3.2.1.14];K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460374371|ref|XP_004232984.1|//PREDICTED: MACPF domain-containing protein CAD1 [Solanum lycopersicum]
Solyc01g104910.3.1	2887	1865.48422504511	687.645105442666	-1.43981407517696	0.00331833583924645	Down	0.000841952887198099	NA	NA	NA	NA	gi|460369408|ref|XP_004230554.1|//PREDICTED: uncharacterized protein LOC101246968 [Solanum lycopersicum]
Solyc02g087620.3.1	3830	1613.13704326777	712.022958058469	-1.17987334266806	1.85699661484882e-05	Down	2.79366271713502e-06	NA	NA	NA	K13024//inositol-hexakisphosphate/diphosphoinositol-pentakisphosphate 1-kinase [EC:2.7.4.24]	gi|460372869|ref|XP_004232245.1|//PREDICTED: inositol hexakisphosphate and diphosphoinositol-pentakisphosphate kinase 2 isoform X4 [Solanum lycopersicum]
Solyc02g070220.3.1	1362	747.939181501474	152.308460619525	-2.29592487780754	1.54910428964174e-09	Down	1.12943715247107e-10	NA	GO:0043139//5'-3' DNA helicase activity;GO:0003697//single-stranded DNA binding	GO:0032508//DNA duplex unwinding	K17680//twinkle protein [EC:3.6.4.12]	gi|970012253|ref|XP_015067070.1|//PREDICTED: primase homolog protein isoform X3 [Solanum pennellii];gi|723675899|ref|XP_010316946.1|//PREDICTED: primase homolog protein [Solanum lycopersicum]
Solyc08g008580.3.1	1908	0.348773083283715	4.58020458955946	3.71505143347401	0.0266865672433258	Up	0.00900626881694765	NA	NA	NA	K01761//methionine-gamma-lyase [EC:4.4.1.11]	gi|460398207|ref|XP_004244654.1|//PREDICTED: methionine gamma-lyase-like [Solanum lycopersicum]
Solyc04g081330.3.1	1519	4733.02301222483	1515.91248397679	-1.64257546970939	2.67244787303548e-07	Down	2.80015318737987e-08	NA	NA	NA	NA	gi|460385314|ref|XP_004238349.1|//PREDICTED: uncharacterized protein LOC101260226 [Solanum lycopersicum]
Solyc09g075120.3.1	1768	1080.26737976496	16947.6692666402	3.97162653305978	1.20840234307947e-36	Up	5.26998188982772e-39	NA	NA	NA	K08678//UDP-glucuronate decarboxylase [EC:4.1.1.35]	gi|460403888|ref|XP_004247418.1|//PREDICTED: UDP-glucuronic acid decarboxylase 2 [Solanum lycopersicum]
Solyc03g006030.3.1	4217	1065.86239743105	284.485597168374	-1.90559367928733	0.000275816722096133	Down	5.34608228306206e-05	NA	NA	NA	K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|723678757|ref|XP_010317425.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Solanum lycopersicum];gi|970015008|ref|XP_015068512.1|//PREDICTED: putative receptor-like protein kinase At3g47110 isoform X2 [Solanum pennellii]
Solyc09g082780.3.1	1093	1203.62538025956	2838.09006863968	1.23753394148405	0.00170646703536621	Up	0.000400346783979234	NA	NA	NA	K07904//Ras-related protein Rab-11A;K01953//asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4];K13783//MFS transporter, OPA family, solute carrier family 37 (glycerol-3-phosphate transporter), member 1/2	gi|460404279|ref|XP_004247611.1|//PREDICTED: stem-specific protein TSJT1 [Solanum lycopersicum]
Solyc05g018880.1.1	1539	24.0463063619744	0.79995442307958	-4.90975368964594	9.36146076074777e-05	Down	1.62363489338599e-05	NA	NA	NA	K12259//spermine oxidase [EC:1.5.3.16 1.5.3.-]	gi|460387244|ref|XP_004239292.1|//PREDICTED: probable polyamine oxidase 5 [Solanum lycopersicum]
Solyc01g091940.3.1	1727	380.468715957351	129.287564100141	-1.55719432098739	1.43721893881064e-05	Down	2.10951313425303e-06	NA	GO:0003676//nucleic acid binding	NA	NA	gi|460368014|ref|XP_004229865.1|//PREDICTED: CRS2-associated factor 1, mitochondrial [Solanum lycopersicum]
Solyc02g071920.3.1	1304	128.995652248516	1122.95181981072	3.12190168424123	1.92797275825627e-20	Up	3.36324456114483e-22	GO:0031224//intrinsic component of membrane	NA	GO:0006810//transport	K09874//aquaporin NIP	gi|567757540|ref|NP_001274704.1|//aquaporin NIP1-1-like [Solanum lycopersicum]
Solyc03g095760.3.1	1808	716.48437233229	331.534402944474	-1.11177665243474	0.000823386597037046	Down	0.000179253507617459	NA	NA	NA	K10838//xeroderma pigmentosum group C-complementing protein	gi|460378951|ref|XP_004235230.1|//PREDICTED: rhodanese-like domain-containing protein 7 [Solanum lycopersicum]
Solyc07g066280.3.1	4255	784.672388083235	260.090040652733	-1.59307927717692	0.00402584882407184	Down	0.00104847941455904	NA	GO:0008168//methyltransferase activity;GO:0005488//binding	GO:0008213//protein alkylation;GO:0006730//one-carbon metabolic process	K02493//release factor glutamine methyltransferase [EC:2.1.1.297]	gi|460396878|ref|XP_004243997.1|//PREDICTED: hemK methyltransferase family member 1 [Solanum lycopersicum]
Solyc04g011670.3.1	1651	338.246410670188	159.50929497444	-1.08443412939856	0.02775219355654	Down	0.00941141557243929	GO:0043231//intracellular membrane-bounded organelle	GO:0003677//DNA binding;GO:0005515//protein binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0006351//transcription, DNA-templated	K14431//transcription factor TGA	gi|723689318|ref|XP_010319250.1|//PREDICTED: TGACG-sequence-specific DNA-binding protein TGA-1A isoform X1 [Solanum lycopersicum]
Solyc10g005970.1.1	1197	2.14495668727947	26.2606959340501	3.61388472850999	0.000160782965530266	Up	2.96358940117476e-05	NA	NA	NA	K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6];K15292//syntaxin-binding protein 1;K14398//cleavage and polyadenylation specificity factor subunit 6/7	gi|970057689|ref|XP_015055507.1|//PREDICTED: extensin-like [Solanum pennellii]
Solyc04g076060.3.1	2298	884.883848125852	2304.63105958483	1.38097581178893	1.69544406315501e-07	Up	1.7216325293966e-08	NA	GO:0005515//protein binding	NA	K06630//14-3-3 protein epsilon	gi|350539807|ref|NP_001234278.1|//14-3-3 protein 10 [Solanum lycopersicum]
Solyc04g008710.3.1	943	8379.79808274987	3514.20084945169	-1.25371883256168	0.00746412811968144	Down	0.00210613723967454	NA	NA	NA	K17046//protein DEK;K03404//magnesium chelatase subunit D [EC:6.6.1.1]	gi|460382311|ref|XP_004236883.1|//PREDICTED: glutamic acid-rich protein-like [Solanum lycopersicum]
Solyc08g077150.3.1	5601	3452.53341190544	1265.10208091532	-1.44840157575412	1.58728888087723e-05	Down	2.35123229931642e-06	NA	NA	NA	K01102//pyruvate dehydrogenase phosphatase [EC:3.1.3.43]	gi|460400717|ref|XP_004245879.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g46580, chloroplastic [Solanum lycopersicum]
Solyc09g090180.1.1	627	7.39886987588686	37.4087031066905	2.33799711968096	0.0433949039335379	Up	0.0158306964662865	NA	NA	NA	NA	gi|982742407|ref|NP_001306073.1|//protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4 [Solanum lycopersicum]
Solyc07g042610.2.1	4628	1.19804282598691	62.1078868882189	5.69602509781557	0.000151204016470639	Up	2.76392014601169e-05	NA	NA	NA	K13963//serpin B;K17604//zinc finger SWIM domain-containing protein 3	gi|295841810|dbj|BAJ06702.1|//unnamed protein product [Solanum lycopersicum]
Solyc02g087740.3.1	1728	104.711823034026	882.534908602058	3.07522899873946	8.05404034421553e-07	Up	9.22846280681323e-08	NA	NA	NA	K10712//cysteamine dioxygenase [EC:1.13.11.19]	gi|460372852|ref|XP_004232237.1|//PREDICTED: 2-aminoethanethiol dioxygenase [Solanum lycopersicum]
Solyc12g049510.2.1	3756	182.837737862601	22.5118866505766	-3.0218049998827	0.0248699923162265	Down	0.00829429407150854	NA	NA	NA	K11294//nucleolin	gi|723751698|ref|XP_010314456.1|//PREDICTED: uncharacterized protein LOC101267294 [Solanum lycopersicum]
Solyc08g079330.2.1	1849	8.35679657530343	0.749336217507569	-3.47926492985105	0.0173749205044794	Down	0.00546285427371717	NA	NA	NA	K13083//flavonoid 3',5'-hydroxylase [EC:1.14.13.88];K20770;K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30]	gi|460401266|ref|XP_004246147.1|//PREDICTED: flavonoid 3'-monooxygenase-like [Solanum lycopersicum]
Solyc06g051900.3.1	2221	259.374249180647	79.2397836028148	-1.71073840966858	7.45425441234178e-06	Down	1.0355600937378e-06	NA	GO:0004326//tetrahydrofolylpolyglutamate synthase activity;GO:0005524//ATP binding;GO:0008841//dihydrofolate synthase activity;GO:0016874//ligase activity	GO:0008152//metabolic process;GO:0046901//tetrahydrofolylpolyglutamate biosynthetic process;GO:0009793//embryo development ending in seed dormancy;GO:0006761//dihydrofolate biosynthetic process	K20457//dihydrofolate synthase [EC:6.3.2.12]	gi|460390673|ref|XP_004240952.1|//PREDICTED: dihydrofolate synthetase [Solanum lycopersicum]
Solyc09g010960.3.1	3456	30.5271943461986	3.54451189443462	-3.10643612583931	0.0418581483538614	Down	0.0151686640187953	NA	NA	NA	K08956//AFG3 family protein [EC:3.4.24.-];K18834//WRKY transcription factor 1	gi|460402743|ref|XP_004246870.1|//PREDICTED: probable WRKY transcription factor 49 isoform X1 [Solanum lycopersicum]
Solyc11g073010.1.1	1905	59.8526718005679	23.0266582231095	-1.37811059683622	0.033078601522675	Down	0.0115395345031577	NA	NA	NA	K07195//exocyst complex component 7	gi|460411822|ref|XP_004251304.1|//PREDICTED: exocyst complex component EXO70A1 [Solanum lycopersicum]
Solyc02g086270.3.1	2923	121.134046679478	2588.67430748932	4.41753714496758	4.43711034381937e-14	Up	1.64894849142236e-15	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723671934|ref|XP_010316317.1|//PREDICTED: probable serine/threonine-protein kinase At1g18390 isoform X4 [Solanum lycopersicum];gi|460373049|ref|XP_004232335.1|//PREDICTED: probable serine/threonine-protein kinase At1g18390 isoform X2 [Solanum lycopersicum];gi|970009081|ref|XP_015065405.1|//PREDICTED: probable serine/threonine-protein kinase At1g18390 [Solanum pennellii];gi|723671924|ref|XP_010316315.1|//PREDICTED: probable serine/threonine-protein kinase At1g18390 isoform X1 [Solanum lycopersicum]
Solyc00g007130.3.1	1266	48.5257914079608	10.318352199954	-2.23353914560665	0.00394346187195171	Down	0.00102393601461218	GO:0031224//intrinsic component of membrane	NA	NA	K14209//solute carrier family 36 (proton-coupled amino acid transporter)	gi|460415803|ref|XP_004253243.1|//PREDICTED: proton-coupled amino acid transporter 3-like [Solanum lycopersicum]
BGI_novel_G000407	1351	4.72563391924054	23.9003287642295	2.33845068605781	0.0446525510932721	Up	0.0163826994338407	NA	NA	NA	NA	NA
Solyc11g012090.2.1	2060	128.836341352365	289.773004193575	1.16938359964493	0.000596096787985046	Up	0.000125554838983151	NA	NA	NA	NA	gi|460409652|ref|XP_004250252.1|//PREDICTED: transcription initiation factor TFIID subunit 11-like [Solanum lycopersicum]
Solyc01g103920.3.1	423	128.091650755187	4.38155819870204	-4.86958860922606	1.36551400026488e-08	Down	1.15031371723522e-09	GO:0009536//plastid	GO:0043169//cation binding;GO:0051536//iron-sulfur cluster binding	GO:0006091//generation of precursor metabolites and energy;GO:0051234//establishment of localization	K02639//ferredoxin	gi|460369244|ref|XP_004230473.1|//PREDICTED: ferredoxin-like [Solanum lycopersicum]
Solyc05g013410.3.1	1631	143.439936153795	1248.39106334256	3.1215512785393	6.45495462083672e-12	Up	3.23373304398559e-13	NA	NA	NA	K14026//SEL1 protein	gi|460386880|ref|XP_004239122.1|//PREDICTED: F-box protein At1g70590-like [Solanum lycopersicum]
Solyc12g005560.1.1	2133	6.33161822809587	22.9915868082871	1.86045986552512	0.0184947216133352	Up	0.005876286231999	NA	NA	NA	NA	gi|723747074|ref|XP_010313662.1|//PREDICTED: protein MLP1-like [Solanum lycopersicum]
Solyc01g098820.3.1	2319	55.9362066603046	8.9073007497176	-2.65072220837908	0.000459073710632079	Down	9.36525428018998e-05	NA	NA	NA	K10523//speckle-type POZ protein	gi|460370859|ref|XP_004231266.1|//PREDICTED: coleoptile phototropism protein 1-like [Solanum lycopersicum]
Solyc03g033850.3.1	1896	102.53369224547	347.216385803224	1.75973698027629	7.7471009539083e-06	Up	1.08086323507078e-06	NA	NA	NA	K08492//syntaxin 18	gi|460377659|ref|XP_004234608.1|//PREDICTED: syntaxin-81-like [Solanum lycopersicum]
Solyc05g055845.1.1	2220	414.620203434486	71.2837132685664	-2.54014602124467	8.2596430879989e-07	Down	9.48559726931736e-08	NA	NA	NA	K13692//UDP-glucose:(indol-3-yl)acetate beta-D-glucosyltransferase [EC:2.4.1.121];K11820//N-hydroxythioamide S-beta-glucosyltransferase [EC:2.4.1.195];K13691//pathogen-inducible salicylic acid glucosyltransferase [EC:2.4.1.-]	gi|460388067|ref|XP_004239693.1|//PREDICTED: UDP-glycosyltransferase 86A1-like [Solanum lycopersicum]
Solyc10g007300.2.1	4999	1466.16831067375	489.284903588665	-1.58330405339462	0.0108885953378982	Down	0.00321649463444323	NA	NA	NA	NA	NA
Solyc10g081850.2.1	1302	315.024781920595	1529.67791681765	2.27969068642891	3.40552521198484e-07	Up	3.65331055616981e-08	GO:0044464//cell part;GO:0005622//intracellular;GO:0016021//integral component of membrane	GO:0005484//SNAP receptor activity;GO:0005515//protein binding	GO:0006886//intracellular protein transport;GO:0061025//membrane fusion;GO:0015031//protein transport;GO:0016192//vesicle-mediated transport	K08486//syntaxin 1B/2/3	gi|460407932|ref|XP_004249403.1|//PREDICTED: syntaxin-121-like [Solanum lycopersicum];gi|698532400|ref|XP_009763025.1|//PREDICTED: syntaxin-121 [Nicotiana sylvestris]
Solyc04g074940.3.1	1214	167.420681514455	1315.12471796204	2.97364996146324	5.08512223684387e-23	Up	6.99422284700831e-25	NA	NA	NA	K08505//protein transport protein SFT1	gi|970020975|ref|XP_015071737.1|//PREDICTED: uncharacterized protein LOC107015835 [Solanum pennellii];gi|460384535|ref|XP_004237966.1|//PREDICTED: bet1-like protein At4g14600 [Solanum lycopersicum]
Solyc10g084040.2.1	937	1359.30321434549	562.099138709797	-1.27397079880907	3.47665303727865e-07	Down	3.73479724669638e-08	NA	NA	NA	K17600//vacuolar protein sorting-associated protein 54	gi|460408096|ref|XP_004249484.1|//PREDICTED: thylakoid lumenal 15.0 kDa protein 2, chloroplastic [Solanum lycopersicum]
Solyc02g083580.4.1	1420	653.528675083534	1488.80498805413	1.18783234997945	0.00122796708284146	Up	0.000278063964077153	GO:0044424//intracellular part	GO:0032561//guanyl ribonucleotide binding	GO:0035556//intracellular signal transduction	K04392//Ras-related C3 botulinum toxin substrate 1	gi|723672802|ref|XP_010316434.1|//PREDICTED: rac-like GTP-binding protein RHO1 [Solanum lycopersicum]
Solyc08g062340.3.1	468	107.05630599468	19.9702214964129	-2.42244753866464	0.00105192990401552	Down	0.000234908008608804	GO:0044424//intracellular part	NA	GO:0050896//response to stimulus	K13993//HSP20 family protein	gi|854283336|ref|NP_001234130.2|//cytosolic class II small heat shock protein HCT2 [Solanum lycopersicum]
Solyc08g079480.3.1	1201	30.0293004137493	147.259369919893	2.29391666352453	8.46714273723758e-08	Up	8.15532161660277e-09	NA	NA	NA	NA	gi|460400379|ref|XP_004245712.1|//PREDICTED: uncharacterized protein LOC101265157 [Solanum lycopersicum]
Solyc10g083690.3.1	1516	129.16851599634	8460.75570645578	6.03346015895622	9.22246745614659e-17	Up	2.43727800298492e-18	NA	GO:0005506//iron ion binding;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K20618	gi|460408052|ref|XP_004249462.1|//PREDICTED: cytochrome P450 76A2-like [Solanum lycopersicum]
Solyc08g067050.3.1	1817	675.91750772452	315.182861382756	-1.10065809582798	0.013121385349787	Down	0.00397192375225957	NA	NA	NA	K11434//type I protein arginine methyltransferase [EC:2.1.1.319]	gi|460399329|ref|XP_004245194.1|//PREDICTED: protein arginine N-methyltransferase PRMT10 [Solanum lycopersicum]
Solyc06g066700.1.1	249	828.751855617627	1.30458048169241	-9.31121043616617	8.12329262786677e-30	Down	6.02555253073463e-32	NA	NA	NA	NA	gi|723709270|ref|XP_010322682.1|//PREDICTED: uncharacterized protein LOC104648055 [Solanum lycopersicum]
Solyc07g018200.1.1	960	2.23388268044382	66.7229053430518	4.90055678487819	2.35117589985405e-08	Up	2.04198592763529e-09	GO:0031224//intrinsic component of membrane;GO:0043231//intracellular membrane-bounded organelle	GO:0016758//transferase activity, transferring hexosyl groups	GO:0006464//cellular protein modification process	K20843;K14753//guanine nucleotide-binding protein subunit beta-2-like 1 protein;K00734//galactosylxylosylprotein 3-beta-galactosyltransferase [EC:2.4.1.134]	gi|723713515|ref|XP_004242922.2|//PREDICTED: probable beta-1,3-galactosyltransferase 20 [Solanum lycopersicum]
Solyc01g087290.3.1	2137	2232.47201695355	508.59497675411	-2.13405297378922	6.04703334784982e-24	Down	7.50582266599818e-26	NA	GO:0016627//oxidoreductase activity, acting on the CH-CH group of donors;GO:0050662//coenzyme binding	GO:0006399//tRNA metabolic process	K05539//tRNA-dihydrouridine synthase A [EC:1.-.-.-]	gi|460367548|ref|XP_004229635.1|//PREDICTED: tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+]-like [Solanum lycopersicum]
Solyc02g088690.3.1	1641	3149.12981854904	12419.1383012635	1.97953993907208	4.08846243222943e-05	Up	6.57738327773305e-06	NA	NA	NA	K00012//UDPglucose 6-dehydrogenase [EC:1.1.1.22]	gi|460372721|ref|XP_004232174.1|//PREDICTED: UDP-glucose 6-dehydrogenase 2 [Solanum lycopersicum]
Solyc04g016200.1.1	1356	699.599323345207	198.821017432919	-1.81505862116809	0.00504611644298968	Down	0.00134899161805286	NA	NA	NA	K13495//cis-zeatin O-glucosyltransferase [EC:2.4.1.215]	gi|723688795|ref|XP_010319172.1|//PREDICTED: zeatin O-glucosyltransferase-like [Solanum lycopersicum]
Solyc02g082150.1.1	1050	6.06032573932205	93.3279425271625	3.94484184583513	9.30077358104402e-06	Up	1.31496325454376e-06	NA	NA	NA	NA	gi|723673391|ref|XP_010316504.1|//PREDICTED: uncharacterized protein LOC104645781 [Solanum lycopersicum]
Solyc01g089890.3.1	1138	299.713621159899	1321.64543521608	2.14067863237708	0.0117809960553535	Up	0.00351260576437948	NA	NA	NA	K20359//PRA1 family protein 1	gi|460367747|ref|XP_004229732.1|//PREDICTED: uncharacterized protein LOC101253128 [Solanum lycopersicum];gi|969999939|ref|XP_015085535.1|//PREDICTED: uncharacterized protein LOC107028834 [Solanum pennellii]
BGI_novel_G000453	1080	1220.65524625852	0.756446835969058	-10.6561294806312	1.55341073263532e-23	Down	2.02659071277159e-25	NA	NA	NA	K15502//serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A	gi|971582366|ref|XP_015159747.1|//PREDICTED: ankyrin repeat-containing protein At3g12360-like [Solanum tuberosum]
Solyc09g074520.3.1	2326	1837.67037851348	691.535982443504	-1.41000178908604	0.046731608890666	Down	0.01729529389725	NA	GO:0043178//alcohol binding	GO:0009755//hormone-mediated signaling pathway	K14485//transport inhibitor response 1	gi|350534820|ref|NP_001234673.1|//TIR1-like protein [Solanum lycopersicum]
Solyc10g085410.2.1	2747	371.829741401364	57.6758300182076	-2.68860340503347	1.68427894024062e-05	Down	2.50620304511725e-06	NA	NA	NA	NA	gi|460408313|ref|XP_004249590.1|//PREDICTED: cactin [Solanum lycopersicum];gi|565343696|ref|XP_006338964.1|//PREDICTED: cactin [Solanum tuberosum]
Solyc07g039500.3.1	3122	1123.50626619028	269.705625120804	-2.05855065436067	4.90166743523345e-08	Down	4.50921247582979e-09	NA	GO:0003723//RNA binding	NA	K01148//poly(A)-specific ribonuclease [EC:3.1.13.4]	gi|723717198|ref|XP_010324059.1|//PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic [Solanum lycopersicum]
Solyc04g081700.3.1	773	41.3882321184204	8.00988326916383	-2.36936750275031	0.0345734914261316	Down	0.0121254652165078	NA	NA	NA	NA	NA
Solyc10g081570.2.1	1575	14836.0168371505	186249.379747083	3.65005990572134	8.0388769132299e-05	Up	1.3738460936475e-05	NA	NA	NA	K17046//protein DEK;K11984//U4/U6.U5 tri-snRNP-associated protein 1	gi|970054891|ref|XP_015089091.1|//PREDICTED: ABC transporter F family member 4-like isoform X2 [Solanum pennellii];gi|460407884|ref|XP_004249379.1|//PREDICTED: ABC transporter F family member 4-like [Solanum lycopersicum]
Solyc01g005980.3.1	1485	613.193802439798	144.960198536208	-2.0806862793265	0.000149618980082895	Down	2.73048503983097e-05	NA	NA	NA	NA	gi|460365647|ref|XP_004228712.1|//PREDICTED: uncharacterized protein LOC101247847 [Solanum lycopersicum]
Solyc05g053250.3.1	1111	469.424132478713	1196.27398785899	1.34958393819166	0.000172008373239602	Up	3.19293908876256e-05	NA	NA	NA	K17808//mitochondrial protein import protein ZIM17	gi|460388466|ref|XP_004239888.1|//PREDICTED: uncharacterized protein LOC101267608 isoform X1 [Solanum lycopersicum]
Solyc04g071600.3.1	668	64.9322001646739	1492.65570949421	4.52280353234135	3.53809176892799e-10	Up	2.33692359271672e-11	NA	NA	GO:0050896//response to stimulus	NA	gi|460384212|ref|XP_004237807.1|//PREDICTED: abscisic stress-ripening protein 3-like [Solanum lycopersicum]
Solyc01g066050.3.1	2308	1378.09457539237	4199.37452248103	1.60749956089219	1.33273862750475e-05	Up	1.93840246180242e-06	NA	NA	NA	K09571//FK506-binding protein 4/5 [EC:5.2.1.8]	gi|460366805|ref|XP_004229269.1|//PREDICTED: uncharacterized transmembrane protein DDB_G0289901 [Solanum lycopersicum]
Solyc05g053360.3.1	1409	926.709909578339	414.320078723513	-1.16137206122359	0.00019135462919316	Down	3.58558118739382e-05	GO:0016020//membrane	NA	NA	NA	gi|460388452|ref|XP_004239881.1|//PREDICTED: uncharacterized protein LOC101265439 isoform X1 [Solanum lycopersicum]
Solyc07g062190.3.1	976	11163.7942318948	3965.96597869497	-1.4930832315478	3.51066984344817e-07	Down	3.77526558012076e-08	GO:0030529//intracellular ribonucleoprotein complex;GO:0009532//plastid stroma	GO:0005198//structural molecule activity	GO:0010467//gene expression;GO:0003006//developmental process involved in reproduction	K02871//large subunit ribosomal protein L13	gi|460397472|ref|XP_004244291.1|//PREDICTED: 50S ribosomal protein L13, chloroplastic [Solanum lycopersicum]
Solyc09g082690.3.1	8961	27016.278506549	93.5452928818093	-8.17394818158573	4.39532003540633e-36	Down	1.98238304862146e-38	NA	NA	NA	NA	gi|460404259|ref|XP_004247601.1|//PREDICTED: dymeclin [Solanum lycopersicum]
Solyc10g006850.3.1	2109	39.5947399037795	12.0592670879537	-1.71516655446166	0.00840547789174139	Down	0.00240026711378525	NA	NA	NA	K12486//stromal membrane-associated protein	gi|460405625|ref|XP_004248276.1|//PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD5 [Solanum lycopersicum];gi|971578458|ref|XP_015158726.1|//PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD5 isoform X2 [Solanum tuberosum]
Solyc07g065620.3.1	2391	447.329707247472	203.49873139192	-1.13631877038488	0.000129840678584907	Down	2.33130516156068e-05	NA	NA	NA	K01148//poly(A)-specific ribonuclease [EC:3.1.13.4]	gi|460396966|ref|XP_004244040.1|//PREDICTED: poly(A)-specific ribonuclease PARN [Solanum lycopersicum]
Solyc01g090180.3.1	819	453.841620443687	131.478806433949	-1.78735865549139	0.0355644049067431	Down	0.0125339737734179	NA	NA	NA	K15777//4,5-DOPA dioxygenase extradiol [EC:1.13.11.-]	gi|460367764|ref|XP_004229740.1|//PREDICTED: 4,5-DOPA dioxygenase extradiol-like [Solanum lycopersicum]
Solyc12g042600.2.1	2043	923.90642317462	9363.41698045208	3.34121646445031	2.4594326163526e-09	Up	1.85181671575677e-10	NA	NA	NA	K13496//UDP-glucosyl transferase 73C [EC:2.4.1.-]	gi|460413878|ref|XP_004252303.1|//PREDICTED: UDP-glycosyltransferase 73C1-like [Solanum lycopersicum]
Solyc03g006410.3.1	1080	119.14430927104	0.483653635578256	-7.94452008637991	1.45071445035431e-11	Down	7.64074667642252e-13	NA	NA	NA	NA	gi|460376664|ref|XP_004234117.1|//PREDICTED: uncharacterized protein LOC101259314 [Solanum lycopersicum]
Solyc09g005360.3.1	1867	397.29970531391	1299.03803484367	1.7091440439557	1.65170224519323e-11	Up	8.78551924813903e-13	NA	NA	NA	K06236//collagen, type I, alpha;K14491//two-component response regulator ARR-B family;K14317//nuclear pore complex protein Nup214	gi|460402520|ref|XP_004246760.1|//PREDICTED: PHD finger protein ALFIN-LIKE 1 [Solanum lycopersicum];gi|565400160|ref|XP_006365600.1|//PREDICTED: PHD finger protein ALFIN-LIKE 1-like [Solanum tuberosum]
Solyc05g005870.3.1	1590	207.122685386142	0.895479015976276	-7.85361023444828	3.80310583825015e-15	Down	1.19927968509006e-16	NA	NA	NA	K07874//Ras-related protein Rab-1A;K00801//farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21];K01623//fructose-bisphosphate aldolase, class I [EC:4.1.2.13]	gi|565379060|ref|XP_006355961.1|//PREDICTED: WAT1-related protein At1g70260-like [Solanum tuberosum];gi|460386010|ref|XP_004238693.1|//PREDICTED: WAT1-related protein At1g70260 [Solanum lycopersicum]
Solyc12g040685.1.1	1341	37.9706701535231	11.6583169600611	-1.70352593114642	0.0214313553605486	Down	0.00697820010078233	NA	NA	NA	K07305//peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12];K03549//KUP system potassium uptake protein;K05665//ATP-binding cassette, subfamily C (CFTR/MRP), member 1;K00695//sucrose synthase [EC:2.4.1.13];K18660//malonyl-CoA/methylmalonyl-CoA synthetase [EC:6.2.1.-];K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|971546042|ref|XP_015163071.1|//PREDICTED: uncharacterized protein LOC107060125 [Solanum tuberosum]
Solyc01g100480.3.1	1222	391.536088640892	946.669647167674	1.27371577644812	0.00435602105781662	Up	0.00114599659408341	NA	NA	NA	NA	gi|460368907|ref|XP_004230306.1|//PREDICTED: uncharacterized protein LOC101248334 [Solanum lycopersicum]
Solyc10g079290.2.1	2884	374.112083857473	153.578749455473	-1.28449196029735	0.00192629177057929	Down	0.000458595816926555	GO:0016020//membrane	NA	NA	K07277//outer membrane protein insertion porin family	gi|460407540|ref|XP_004249210.1|//PREDICTED: outer envelope protein 80, chloroplastic-like isoform X1 [Solanum lycopersicum]
Solyc01g106700.3.1	642	35.6005024701286	92.6058393367254	1.37920556294507	0.0211918328108771	Up	0.00688884650155283	NA	NA	NA	K12412//pheromone receptor transcription factor;K09260//MADS-box transcription enhancer factor 2A;K04454//MADS-box transcription enhancer factor 2C	gi|460371088|ref|XP_004231377.1|//PREDICTED: agamous-like MADS-box protein AGL62 [Solanum lycopersicum]
Solyc06g005880.3.1	3030	9.81721206041746	0.387610554814955	-4.66263361750126	0.00221512400026253	Down	0.000534955583632807	NA	NA	NA	K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|723704744|ref|XP_010321910.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Solanum lycopersicum]
Solyc09g075700.1.1	912	5.0782727811532	381.631273463299	6.23169769828807	8.68379279180823e-26	Up	8.99841358328123e-28	NA	GO:0016787//hydrolase activity	GO:0008152//metabolic process	K13258//2-hydroxyisoflavanone dehydratase [EC:4.2.1.105]	gi|460404114|ref|XP_004247529.1|//PREDICTED: 2-hydroxyisoflavanone dehydratase-like [Solanum lycopersicum]
Solyc02g093980.3.1	6005	910.200981029572	2420.74068074009	1.41119149406875	0.00337648846497896	Up	0.000859224942239876	GO:0044611//nuclear pore inner ring	GO:0017056//structural constituent of nuclear pore	GO:0006999//nuclear pore organization;GO:0000059//protein import into nucleus, docking	K00939//adenylate kinase [EC:2.7.4.3]	gi|460371936|ref|XP_004231790.1|//PREDICTED: uncharacterized protein LOC101246002 [Solanum lycopersicum]
Solyc02g094440.3.1	1374	1698.31520873444	6148.80683739112	1.8562022366133	2.89582947317063e-12	Up	1.37948041848519e-13	GO:0031224//intrinsic component of membrane;GO:0043231//intracellular membrane-bounded organelle;GO:0016021//integral component of membrane;GO:0005789//endoplasmic reticulum membrane	NA	NA	K13250//translocon-associated protein subunit beta	gi|568214768|ref|NP_001275114.1|//translocon-associated protein subunit beta-like precursor [Solanum tuberosum];gi|460371855|ref|XP_004231750.1|//PREDICTED: translocon-associated protein subunit beta [Solanum lycopersicum]
Solyc04g072930.1.1	1983	427.227807321241	1480.37027210516	1.79288061266675	7.55833776564777e-09	Up	6.12487934341667e-10	NA	NA	NA	K13162//poly(rC)-binding protein 2/3/4	gi|460384391|ref|XP_004237895.1|//PREDICTED: F-box protein At1g78100 [Solanum lycopersicum]
Solyc07g006700.1.1	591	59.996284300395	8.87686756854104	-2.75675057489493	0.000547462937887422	Down	0.000113908532849545	NA	NA	NA	K20412//peptidase inhibitor 16	gi|460394165|ref|XP_004242675.1|//PREDICTED: pathogenesis-related protein PR-1 [Solanum lycopersicum]
Solyc12g044370.2.1	2787	268.037595172135	126.514384114533	-1.08313394630051	0.00144196923090107	Down	0.000332328006361313	NA	NA	NA	K00784//ribonuclease Z [EC:3.1.26.11]	gi|970065472|ref|XP_015059694.1|//PREDICTED: zinc phosphodiesterase ELAC protein 2-like isoform X1 [Solanum pennellii]
Solyc11g065220.2.1	2338	305.859464990484	48.70372878164	-2.65076478666647	2.02706174948966e-07	Down	2.08582970532285e-08	NA	NA	NA	K00844//hexokinase [EC:2.7.1.1]	gi|460411924|ref|XP_004251354.1|//PREDICTED: hexokinase-3-like [Solanum lycopersicum]
Solyc08g014030.1.1	1257	62.860415183926	13.6436542521514	-2.20392170019112	0.00710131236620605	Down	0.00198999800093697	NA	NA	NA	K14494//DELLA protein	gi|460398404|ref|XP_004244750.1|//PREDICTED: protein SHORT-ROOT-like [Solanum lycopersicum]
Solyc01g079930.2.1	1551	1.76350684759819	19.9675513515452	3.50113834114797	0.000968295272093375	Up	0.000214679449769323	NA	GO:0004190//aspartic-type endopeptidase activity	GO:0006508//proteolysis	K00924;K02882//large subunit ribosomal protein L18Ae	gi|723658775|ref|XP_010322595.1|//PREDICTED: basic 7S globulin-like isoform X1 [Solanum lycopersicum];gi|723658778|ref|XP_010322603.1|//PREDICTED: basic 7S globulin-like isoform X2 [Solanum lycopersicum]
Solyc01g068560.3.1	1069	1563.56127168061	167.401381941263	-3.22345241276808	7.87068884941139e-29	Down	6.10221887832701e-31	NA	NA	NA	NA	gi|723657724|ref|XP_010320656.1|//PREDICTED: uncharacterized protein LOC101268608 [Solanum lycopersicum]
Solyc11g061760.2.1	879	69.8036836544101	183.75090514918	1.39637627969079	0.0128420305309647	Up	0.00387395829309294	NA	NA	NA	NA	gi|460410926|ref|XP_004250866.1|//PREDICTED: protein slowmo homolog 1-like [Solanum lycopersicum]
Solyc01g111460.3.1	2042	214.781052498725	97.0568765279349	-1.14596439029244	0.0465143057857076	Down	0.0172009999888178	GO:0043231//intracellular membrane-bounded organelle;GO:0005839//proteasome core complex	GO:0004175//endopeptidase activity	GO:0019941//modification-dependent protein catabolic process	K17964//leucine-rich PPR motif-containing protein, mitochondrial;K02731//20S proteasome subunit alpha 4 [EC:3.4.25.1]	gi|723666342|ref|XP_010315377.1|//PREDICTED: pentatricopeptide repeat-containing protein At2g16880 [Solanum lycopersicum];gi|82621184|gb|ABB86280.1|//proteasome-like protein alpha subunit-like [Solanum tuberosum]
Solyc09g076030.3.1	986	1061.96489631716	241.778313614367	-2.13497932556224	3.63751148983192e-10	Down	2.41208175801811e-11	NA	NA	NA	K08902//photosystem II Psb27 protein	gi|460403761|ref|XP_004247356.1|//PREDICTED: photosystem II D1 precursor processing protein PSB27-H2, chloroplastic [Solanum lycopersicum]
Solyc12g008790.2.1	1837	354.457060235616	111.94273580003	-1.66284995486246	5.15406785265971e-05	Down	8.46075548796532e-06	NA	NA	NA	K00677//UDP-N-acetylglucosamine acyltransferase [EC:2.3.1.129]	gi|460412554|ref|XP_004251663.1|//PREDICTED: probable acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase, mitochondrial isoform X1 [Solanum lycopersicum];gi|723747698|ref|XP_010313751.1|//PREDICTED: probable acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase, mitochondrial isoform X3 [Solanum lycopersicum]
BGI_novel_G000020	4180	32.916153203274	143.456923974082	2.12374995376622	0.00697668727151769	Up	0.00194805294285593	NA	NA	NA	NA	NA
Solyc05g013250.2.1	2219	165.299871051698	339.394655464983	1.03787824736639	0.0170709599514515	Up	0.00535392340209905	NA	NA	NA	K10256//omega-6 fatty acid desaturase / acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.6 1.14.19.22];K13457//disease resistance protein RPM1	gi|970065917|ref|XP_015059925.1|//PREDICTED: delta(12)-fatty-acid desaturase FAD2-like [Solanum pennellii];gi|970029942|ref|XP_015076286.1|//PREDICTED: putative late blight resistance protein homolog R1B-16 [Solanum pennellii]
Solyc03g058430.2.1	1769	829.213178636517	120.265888466635	-2.78551554258843	1.25081321067528e-10	Down	7.64624148467074e-12	NA	GO:0016705//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	GO:0044238//primary metabolic process	K10256//omega-6 fatty acid desaturase / acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.6 1.14.19.22]	gi|938154139|gb|ALJ11238.1|//delta-12 fatty acid desaturase [Buglossoides arvensis];gi|460378000|ref|XP_004234773.1|//PREDICTED: omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2-like [Solanum lycopersicum]
Solyc05g005230.3.1	547	48.0549681806888	4.35009824631985	-3.4655657027768	0.00027582795053858	Down	5.34732805558056e-05	NA	NA	NA	NA	gi|460385934|ref|XP_004238655.1|//PREDICTED: uncharacterized protein LOC101248387 [Solanum lycopersicum]
Solyc06g007310.3.1	1661	397.696263781595	179.665546758989	-1.14635322904117	0.00285710005407114	Down	0.000712251571553146	NA	GO:0004520//endodeoxyribonuclease activity	NA	K03424//TatD DNase family protein [EC:3.1.21.-]	gi|460389552|ref|XP_004240415.1|//PREDICTED: putative deoxyribonuclease TATDN1 [Solanum lycopersicum];gi|565354333|ref|XP_006344066.1|//PREDICTED: putative deoxyribonuclease TATDN1 [Solanum tuberosum]
Solyc01g096240.3.1	3076	8553.63215088959	2827.07241923757	-1.59722832521746	6.85105126842427e-08	Down	6.49659848921699e-09	NA	NA	NA	K14066//geranyl diphosphate synthase [EC:2.5.1.1]	gi|460368308|ref|XP_004230009.1|//PREDICTED: uncharacterized protein LOC101260575 [Solanum lycopersicum]
Solyc03g115860.3.1	1788	628.407807882481	1866.39760113198	1.57048334700199	1.71901237478341e-05	Up	2.56301233753304e-06	NA	NA	NA	NA	gi|460380572|ref|XP_004236029.1|//PREDICTED: uncharacterized endoplasmic reticulum membrane protein C16E8.02 [Solanum lycopersicum]
Solyc03g119305.1.1	3546	866.584010088538	244.113097996318	-1.82778991110362	4.6046813744799e-06	Down	6.11818030982728e-07	NA	NA	NA	K16276//zinc finger protein-like protein	gi|460380010|ref|XP_004235751.1|//PREDICTED: uncharacterized protein LOC101263990 isoform X1 [Solanum lycopersicum];gi|723685704|ref|XP_010318621.1|//PREDICTED: uncharacterized protein LOC101263990 isoform X3 [Solanum lycopersicum]
Solyc01g096620.3.1	3276	807.516263107719	151.302399562821	-2.4160564475048	4.92175996207456e-08	Down	4.52953084328392e-09	NA	NA	NA	NA	gi|723659654|ref|XP_010324127.1|//PREDICTED: ACI112 protein isoform X2 [Solanum lycopersicum]
Solyc07g043395.1.1	630	4768.14278761082	502.856848092381	-3.24520777851096	0.000391864426366688	Down	7.8627039180404e-05	NA	NA	NA	NA	gi|460396147|ref|XP_004243640.1|//PREDICTED: cellulose synthase-like protein G2 [Solanum lycopersicum]
Solyc10g076820.2.1	1490	83.9319639787399	30.0234445648763	-1.48313083410755	0.0111273828152512	Down	0.00329615741884602	NA	NA	NA	K01179//endoglucanase [EC:3.2.1.4];K08869//aarF domain-containing kinase;K11865//protein MYSM1;K17613//calcineurin-binding protein cabin-1	gi|460407283|ref|XP_004249083.1|//PREDICTED: transcription factor DIVARICATA-like [Solanum lycopersicum]
Solyc05g024415.1.1	1203	138.764262807387	464.125692817577	1.74187949795637	6.16972976438039e-06	Up	8.41294011329947e-07	NA	NA	NA	K20285//Rab9 effector protein with kelch motifs	gi|460387277|ref|XP_004239307.1|//PREDICTED: nitrile-specifier protein 5-like isoform X1 [Solanum lycopersicum]
Solyc07g005870.3.1	2235	913.688757074402	132.767219887666	-2.78280381254744	1.99648759158839e-16	Down	5.46228526996376e-18	NA	NA	NA	NA	gi|565353388|ref|XP_006343614.1|//PREDICTED: uncharacterized protein Cbei_0202 [Solanum tuberosum];gi|723712206|ref|XP_010323197.1|//PREDICTED: uncharacterized protein LOC101247630 [Solanum lycopersicum]
Solyc08g006330.3.1	1925	128.473487881923	1607.62731087947	3.64539041467351	1.00157620240756e-11	Up	5.15198732414803e-13	NA	GO:0016757//transferase activity, transferring glycosyl groups	NA	K13691//pathogen-inducible salicylic acid glucosyltransferase [EC:2.4.1.-]	gi|460397864|ref|XP_004244486.1|//PREDICTED: UDP-glycosyltransferase 74E1-like [Solanum lycopersicum]
Solyc08g076950.3.1	3344	508.393543565392	1163.30156004935	1.19420751807842	0.00483179929512768	Up	0.00128647466695605	NA	NA	NA	K02184//formin 2	gi|460400748|ref|XP_004245894.1|//PREDICTED: extensin-like [Solanum lycopersicum]
Solyc12g096110.2.1	1025	1.46200135242184	12.9810821296387	3.15039410340245	0.0137113982603921	Up	0.00417607854426955	NA	NA	NA	NA	gi|723753560|ref|XP_010314814.1|//PREDICTED: protein BREVIS RADIX-like [Solanum lycopersicum]
Solyc04g076670.3.1	1497	758.262687417013	2058.28354159291	1.44067209864766	1.10899511811129e-05	Up	1.5865227610374e-06	NA	GO:0046914//transition metal ion binding	NA	NA	gi|460384648|ref|XP_004238022.1|//PREDICTED: TRAF-type zinc finger domain-containing protein 1-like [Solanum lycopersicum]
Solyc02g092530.3.1	2520	1574.04977134986	410.043134551997	-1.94063357213061	5.44577942414574e-06	Down	7.34818902467853e-07	NA	GO:0016810//hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	NA	K01455//formamidase [EC:3.5.1.49]	gi|460372185|ref|XP_004231912.1|//PREDICTED: putative formamidase C869.04 isoform X1 [Solanum lycopersicum];gi|590705619|ref|XP_007047489.1|//Acetamidase/Formamidase family protein isoform 1 [Theobroma cacao]
Solyc08g077240.3.1	2657	3554.95824535671	1657.88353671013	-1.10048995111574	0.0111438768823157	Down	0.00330270482672178	NA	NA	NA	K15449//tRNA wybutosine-synthesizing protein 1 [EC:4.1.3.44]	gi|460400697|ref|XP_004245869.1|//PREDICTED: probable methyltransferase PMT14 [Solanum lycopersicum]
Solyc06g074840.3.1	1291	537.097157630833	3376.09084422253	2.65209873301659	4.62984192979787e-15	Up	1.47206469588399e-16	NA	NA	GO:0006810//transport	K12193//charged multivesicular body protein 3	gi|565360901|ref|XP_006347202.1|//PREDICTED: vacuolar protein sorting-associated protein 24 homolog 1-like [Solanum tuberosum]
Solyc02g093950.3.1	4448	78.9148558006454	268.340823546275	1.76569773339387	0.00346016627175715	Up	0.000882879125908728	NA	NA	NA	K15502//serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A;K13118//protein DGCR14	gi|460371942|ref|XP_004231793.1|//PREDICTED: ankyrin-3 isoform X1 [Solanum lycopersicum]
Solyc00g102400.3.1	3299	73.6196061516776	8.47335963642226	-3.11908402359163	3.71536902508672e-05	Down	5.93838615609506e-06	NA	GO:0032559//adenyl ribonucleotide binding	GO:0012501//programmed cell death;GO:0006950//response to stress	K13453;K13457//disease resistance protein RPM1	gi|723754589|ref|XP_010315011.1|//PREDICTED: LOW QUALITY PROTEIN: putative late blight resistance protein homolog R1B-14, partial [Solanum lycopersicum]
Solyc03g121120.3.1	5201	658.516445142649	293.151879348514	-1.16757116373523	5.95142140307269e-05	Down	9.91607785587257e-06	NA	NA	NA	K04485//DNA repair protein RadA/Sms	gi|460379775|ref|XP_004235636.1|//PREDICTED: uncharacterized protein LOC101253170 [Solanum lycopersicum];gi|460381314|ref|XP_004236396.1|//PREDICTED: pentatricopeptide repeat-containing protein At1g51965, mitochondrial [Solanum lycopersicum]
Solyc03g114030.3.1	2336	1626.70736415668	520.660910944218	-1.64353873696598	3.32576435947248e-07	Down	3.55163071786516e-08	GO:0044464//cell part	NA	GO:0006810//transport	K14611//solute carrier family 23 (nucleobase transporter), member 1/2	gi|460380778|ref|XP_004236131.1|//PREDICTED: nucleobase-ascorbate transporter 6 [Solanum lycopersicum];gi|747079862|ref|XP_011087158.1|//PREDICTED: nucleobase-ascorbate transporter 6 [Sesamum indicum]
Solyc11g068515.1.1	444	17781.6699697135	4088.11292470112	-2.12088386850886	6.01651046576064e-05	Down	1.00424682666155e-05	NA	NA	NA	NA	NA
Solyc06g060680.2.1	879	922.412038743886	2901.35399889961	1.6532430844567	0.00574920095953795	Up	0.00156624489791975	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460392804|ref|XP_004242003.1|//PREDICTED: putative wall-associated receptor kinase-like 16 [Solanum lycopersicum]
Solyc12g089020.2.1	1590	308.343302762861	1207.96265481094	1.96996643687658	0.000310365570460872	Up	6.08745948920943e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460414864|ref|XP_004252782.1|//PREDICTED: protein LYK5-like [Solanum lycopersicum]
Solyc02g086590.3.1	2733	329.230824628847	3214.20429166383	3.28729030696454	1.82925613122484e-14	Up	6.38207745201448e-16	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460373009|ref|XP_004232315.1|//PREDICTED: cysteine-rich receptor-like protein kinase 42 [Solanum lycopersicum]
Solyc12g010745.1.1	3200	530.20748129728	229.026302357872	-1.21104373387376	0.00115568821946892	Down	0.000260663091397287	GO:0031224//intrinsic component of membrane	GO:0032559//adenyl ribonucleotide binding;GO:0016301//kinase activity;GO:0004871//signal transducer activity	GO:0006464//cellular protein modification process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|723748250|ref|XP_010313855.1|//PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 3 isoform X2 [Solanum lycopersicum];gi|460412817|ref|XP_004251794.1|//PREDICTED: protein STRUBBELIG-RECEPTOR FAMILY 3 isoform X1 [Solanum lycopersicum]
Solyc11g010100.2.1	1087	469.911639927727	1032.15801362113	1.1352024411078	0.00266144306097565	Up	0.000658614897935639	GO:0016020//membrane	GO:0032561//guanyl ribonucleotide binding;GO:0003824//catalytic activity	GO:0006810//transport;GO:0035556//intracellular signal transduction	K07904//Ras-related protein Rab-11A	gi|460409367|ref|XP_004250110.1|//PREDICTED: ras-related protein Rab11D [Solanum lycopersicum]
Solyc01g112190.3.1	3096	152.913167577067	49.7394888048588	-1.62024905911668	0.00564565677253723	Down	0.00153536274833874	NA	NA	NA	K14833//nucleolar complex protein 2	gi|460370511|ref|XP_004231096.1|//PREDICTED: protein NLP2 [Solanum lycopersicum]
Solyc03g118330.2.1	444	9.16386348336231	0.735569143050471	-3.63902310115095	0.0101077938573897	Down	0.00295909545832483	NA	NA	NA	K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|723685991|ref|XP_010318667.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Solanum lycopersicum]
Solyc10g051220.2.1	2319	112.189616536065	14.9859135456987	-2.9042602178906	1.75522376707615e-06	Down	2.16360705148383e-07	NA	NA	NA	K13466//EIX receptor 1/2;K19613//leucine-rich repeat protein SHOC2;K10406//kinesin family member C2/C3	gi|460406551|ref|XP_004248726.1|//PREDICTED: uncharacterized protein LOC101243748 [Solanum lycopersicum]
Solyc02g071200.3.1	1535	1108.27710982329	436.586243460883	-1.34398007522627	1.41200052473688e-07	Down	1.41105315596376e-08	NA	NA	NA	K03126//transcription initiation factor TFIID subunit 12;K01802//peptidylprolyl isomerase [EC:5.2.1.8];K03797;K12183//ESCRT-I complex subunit TSG101	gi|723675604|ref|XP_010316906.1|//PREDICTED: carboxyl-terminal-processing peptidase 1, chloroplastic isoform X2 [Solanum lycopersicum];gi|723675601|ref|XP_010316905.1|//PREDICTED: carboxyl-terminal-processing peptidase 1, chloroplastic isoform X1 [Solanum lycopersicum];gi|723675598|ref|XP_010316904.1|//PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 1-like isoform X2 [Solanum lycopersicum];gi|723675595|ref|XP_004233866.2|//PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 1-like isoform X1 [Solanum lycopersicum]
Solyc01g110735.1.1	2503	252.022600742501	112.128540467343	-1.16839957765816	0.00167610102717123	Down	0.000392098182739178	NA	NA	NA	K14488//SAUR family protein;K08739//DNA mismatch repair protein MLH3	gi|971539159|ref|XP_015160667.1|//PREDICTED: DNA mismatch repair protein MLH3 isoform X7 [Solanum tuberosum];gi|971539161|ref|XP_015160669.1|//PREDICTED: DNA mismatch repair protein MLH3 isoform X8 [Solanum tuberosum];gi|460370297|ref|XP_004230990.1|//PREDICTED: auxin-induced protein 15A-like [Solanum lycopersicum]
Solyc11g016940.2.1	6038	276.446726306118	584.240774719672	1.0795615614057	0.0494849847302157	Up	0.0184840104361671	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13415//protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1]	gi|460409875|ref|XP_004250362.1|//PREDICTED: probable magnesium transporter NIPA6 [Solanum lycopersicum];gi|460409877|ref|XP_004250363.1|//PREDICTED: F-box protein CPR30-like [Solanum lycopersicum]
Solyc08g005650.3.1	1819	99.34765219873	7.87944120769534	-3.65632064812944	8.0388769132299e-05	Down	1.37387247082e-05	NA	NA	NA	K07418;K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30];K15472//premnaspirodiene oxygenase [EC:1.14.13.121]	gi|460397773|ref|XP_004244441.1|//PREDICTED: premnaspirodiene oxygenase [Solanum lycopersicum]
Solyc09g082630.3.1	890	4097.97906266651	181.39671306209	-4.49769239402461	2.04768901045127e-32	Down	1.19832702639351e-34	NA	GO:0043169//cation binding;GO:0016701//oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	GO:0043102//amino acid salvage	K08967//1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54]	gi|723732022|ref|XP_010326692.1|//PREDICTED: 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 1 isoform X1 [Solanum lycopersicum]
Solyc06g068760.3.1	4317	1837.77377588418	561.826473632795	-1.70976267446093	2.35830955606373e-07	Down	2.45166443710367e-08	NA	NA	NA	K20870	gi|723708961|ref|XP_010322633.1|//PREDICTED: chromophore lyase CRL, chloroplastic isoform X4 [Solanum lycopersicum]
Solyc01g014103.1.1	2068	640.277167408473	51.1759983444691	-3.64515731686418	8.22784613644758e-12	Down	4.1740340657914e-13	NA	NA	GO:0044267//cellular protein metabolic process	K06636//structural maintenance of chromosome 1	gi|970003989|ref|XP_015062779.1|//PREDICTED: IRK-interacting protein-like [Solanum pennellii]
Solyc01g081270.2.1	1181	143.752217915683	19.5834290065001	-2.87587891094678	0.000329291745442028	Down	6.49917918635582e-05	NA	NA	NA	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|460367326|ref|XP_004229525.1|//PREDICTED: glutathione transferase GST 23-like [Solanum lycopersicum]
Solyc01g057000.3.1	1393	21.5758357114163	6.51966808588931	-1.72654601704893	0.0318897172154593	Down	0.0110641675801959	NA	NA	NA	NA	gi|983616472|ref|NP_001306106.1|//universal stress protein isoform 1 [Solanum lycopersicum]
Solyc04g024730.1.1	880	20.0311002107878	1.84206977898235	-3.44284204559457	0.00201555231200049	Down	0.000481950502515401	NA	NA	NA	NA	NA
Solyc12g096880.2.1	1815	61.885923097951	313.860502412001	2.34244029648192	0.000117263201702413	Up	2.08493168376514e-05	NA	NA	NA	K07466//replication factor A1;K08852//serine/threonine-protein kinase/endoribonuclease IRE1 [EC:2.7.11.1 3.1.26.-];K13414//mitogen-activated protein kinase kinase kinase 1, plant [EC:2.7.11.25];K13459//disease resistance protein RPS2;K02183//calmodulin;K19613//leucine-rich repeat protein SHOC2	gi|460415663|ref|XP_004253177.1|//PREDICTED: protein PHLOEM PROTEIN 2-LIKE A5-like [Solanum lycopersicum]
Solyc06g083910.3.1	1299	15.6442506139556	1.9430977158129	-3.00920219361849	0.028626350583634	Down	0.0097537449934769	NA	GO:0016491//oxidoreductase activity	NA	K18054//2'-deoxymugineic-acid 2'-dioxygenase / mugineic-acid 3-dioxygenase [EC:1.14.11.24 1.14.11.25]	gi|460393522|ref|XP_004242358.1|//PREDICTED: hyoscyamine 6-dioxygenase-like [Solanum lycopersicum]
Solyc00g039990.2.1	647	0.641245634614399	7.61496211199182	3.56988785416501	0.040754087198427	Up	0.0146880598300876	NA	GO:0070566//adenylyltransferase activity;GO:0003676//nucleic acid binding	GO:0010467//gene expression	K00974//tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:2.7.7.72 3.1.3.- 3.1.4.-]	gi|723754349|ref|XP_004253361.2|//PREDICTED: putative CCA tRNA nucleotidyltransferase 2 [Solanum lycopersicum]
Solyc10g005320.3.1	1525	1270.66472314341	12381.7260895194	3.28455713222968	0.00174376992684949	Up	0.000410268218960564	NA	GO:0016836//hydro-lyase activity;GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;GO:0048037//cofactor binding	GO:0006568//tryptophan metabolic process	K01696//tryptophan synthase beta chain [EC:4.2.1.20]	gi|460405872|ref|XP_004248398.1|//PREDICTED: tryptophan synthase beta chain 1-like [Solanum lycopersicum]
Solyc11g071450.2.1	349	1.52699229342458	16.0834186064593	3.39680940461489	0.0238354812280913	Up	0.0078885954161407	NA	NA	NA	NA	NA
Solyc01g109870.3.1	2554	2249.32515595892	6550.05682767532	1.5420151953642	0.00046546727789678	Up	9.51824022119329e-05	GO:0005622//intracellular;GO:0016021//integral component of membrane	GO:0005215//transporter activity	GO:0006810//transport	K19996//phosphatidylinositol transfer protein SFH5;K02433//aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]	gi|460370050|ref|XP_004230868.1|//PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH8-like [Solanum lycopersicum]
Solyc10g085620.2.1	1970	357.864187647304	149.042408844068	-1.26368928030569	0.000618773275878196	Down	0.000130683218321375	NA	NA	NA	K12741//heterogeneous nuclear ribonucleoprotein A1/A3;K06236//collagen, type I, alpha;K14491//two-component response regulator ARR-B family;K14317//nuclear pore complex protein Nup214	gi|971535702|ref|XP_006338935.2|//PREDICTED: uncharacterized protein LOC102592272 isoform X4 [Solanum tuberosum];gi|971535696|ref|XP_006338933.2|//PREDICTED: uncharacterized protein LOC102592272 isoform X1 [Solanum tuberosum];gi|723739703|ref|XP_010312321.1|//PREDICTED: uncharacterized protein LOC101256236 isoform X1 [Solanum lycopersicum]
Solyc12g087893.1.1	2590	863.005687699148	173.642685690094	-2.31324842592096	0.00212233173699189	Down	0.00051009374683628	NA	NA	NA	NA	gi|747061925|ref|XP_011077451.1|//PREDICTED: uncharacterized protein LOC105161457 [Sesamum indicum];gi|723752186|ref|XP_010314585.1|//PREDICTED: transcription factor bHLH143-like isoform X2 [Solanum lycopersicum]
Solyc07g054610.3.1	3145	85.3515366515655	20.4497039445055	-2.06133717041238	0.000109383456598355	Down	1.92811378505152e-05	NA	NA	NA	K00620//glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1];K18195//rhamnogalacturonan endolyase [EC:4.2.2.23]	gi|460396475|ref|XP_004243798.1|//PREDICTED: uncharacterized protein LOC101260065 [Solanum lycopersicum]
Solyc08g068230.3.1	2803	1745.3774834395	186.017402952036	-3.23002958581875	1.64040065885547e-10	Down	1.02540327452684e-11	NA	NA	NA	K17710//pentatricopeptide repeat domain-containing protein 1	gi|723723136|ref|XP_010325168.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g25630 isoform X2 [Solanum lycopersicum]
Solyc09g098530.3.1	2795	3063.2235036801	1330.5050188022	-1.20307668257297	1.21906961103985e-06	Down	1.45817592881575e-07	NA	GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds	GO:0006026//aminoglycan catabolic process	K00434//L-ascorbate peroxidase [EC:1.11.1.11];K20547;K01183//chitinase [EC:3.2.1.14]	gi|460405027|ref|XP_004247979.1|//PREDICTED: uncharacterized protein LOC101254735 [Solanum lycopersicum]
Solyc09g075180.3.1	3313	10135.4562036289	3448.68225711786	-1.55529390899362	3.21996589451592e-08	Down	2.86613931567914e-09	NA	GO:0003913//DNA photolyase activity	GO:0006259//DNA metabolic process	K19589//release factor glutamine methyltransferase [EC:2.1.1.297];K01669//deoxyribodipyrimidine photo-lyase [EC:4.1.99.3]	gi|723731313|ref|XP_004247535.2|//PREDICTED: pentatricopeptide repeat-containing protein At3g62890 [Solanum lycopersicum]
Solyc08g078230.3.1	3974	1001.53693368341	393.504357568211	-1.34776410742953	1.81790476746659e-06	Down	2.24561517794255e-07	NA	GO:0008270//zinc ion binding	NA	K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1];K19041//E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27]	gi|698487917|ref|XP_009790578.1|//PREDICTED: uncharacterized protein LOC104238021 [Nicotiana sylvestris];gi|460400544|ref|XP_004245794.1|//PREDICTED: uncharacterized protein LOC101264658 [Solanum lycopersicum]
Solyc05g051200.1.1	675	63.4964095513266	198.658942258595	1.64554681398254	0.0192237234684912	Up	0.00614230496391482	NA	NA	GO:0050794//regulation of cellular process;GO:0050896//response to stimulus;GO:0006351//transcription, DNA-templated	K14516//ethylene-responsive transcription factor 1	gi|906847312|ref|NP_001234841.2|//ethylene-responsive factor 1 [Solanum lycopersicum]
Solyc07g065900.3.1	1372	10970.8454647908	699.026669627998	-3.97218340154427	6.430337012032e-21	Down	1.07140325196746e-22	NA	NA	NA	K01623//fructose-bisphosphate aldolase, class I [EC:4.1.2.13]	gi|840084522|ref|NP_001296956.1|//fructose-bisphosphate aldolase, cytoplasmic isozyme 1 [Solanum lycopersicum]
Solyc10g083450.2.1	2762	290.884541279194	19.1031000487863	-3.92856794537399	1.27570255172338e-06	Down	1.52924534305293e-07	NA	GO:0035251//UDP-glucosyltransferase activity	NA	K13269//kaempferol 3-O-beta-D-galactosyltransferase [EC:2.4.1.234];K10757//flavonol 3-O-glucosyltransferase [EC:2.4.1.91];K12930//anthocyanidin 3-O-glucosyltransferase [EC:2.4.1.115]	gi|460408022|ref|XP_004249447.1|//PREDICTED: anthocyanidin 3-O-glucosyltransferase-like [Solanum lycopersicum]
Solyc09g092640.3.1	1629	193.736205691934	50.251452261904	-1.94685639624767	0.0132893003029941	Down	0.00402820150827301	NA	NA	NA	K11818//cytochrome P450, family 83, subfamily B, polypeptide 1 [EC:1.14.-.-];K20617	gi|460404876|ref|XP_004247905.1|//PREDICTED: cytochrome P450 83B1-like [Solanum lycopersicum]
Solyc03g026330.3.1	2045	752.734760848766	22.8707978646984	-5.04056299459187	4.13996373366728e-22	Down	6.17260136225925e-24	NA	NA	NA	K05657//ATP-binding cassette, subfamily B (MDR/TAP), member 10	gi|460377131|ref|XP_004234348.1|//PREDICTED: uncharacterized protein LOC101262593 [Solanum lycopersicum]
Solyc06g072220.1.1	636	154.435369105336	592.58555846519	1.94002026827448	7.64901775691246e-05	Up	1.29983121938884e-05	NA	NA	NA	NA	gi|460391746|ref|XP_004241480.1|//PREDICTED: miraculin-like [Solanum lycopersicum]
Solyc09g009840.1.1	867	416.288845587042	4531.18509467034	3.44423161754045	8.8201056908118e-10	Up	6.2088002811117e-11	NA	NA	NA	NA	gi|723727763|ref|XP_010325902.1|//PREDICTED: uncharacterized protein LOC101254416 [Solanum lycopersicum]
Solyc01g095430.3.1	985	26166.5554729506	3549.36822393022	-2.88208986509395	2.12341725788703e-20	Down	3.74376160347609e-22	NA	NA	NA	NA	gi|460368227|ref|XP_004229969.1|//PREDICTED: protein CURVATURE THYLAKOID 1A, chloroplastic [Solanum lycopersicum]
Solyc01g101050.3.1	2675	0.399055003265559	18.1325212559786	5.50584811760693	8.58181281437702e-05	Up	1.47753814632501e-05	NA	NA	NA	K00430//peroxidase [EC:1.11.1.7]	gi|460370936|ref|XP_004231304.1|//PREDICTED: peroxidase 5-like [Solanum lycopersicum]
Solyc12g096680.1.1	1965	93.2343911702248	260.773639994355	1.48386392176242	0.0173837309601317	Up	0.00546692031126551	NA	NA	NA	K10683//BRCA1-associated RING domain protein 1;K11000//callose synthase [EC:2.4.1.-]	gi|460415673|ref|XP_004253182.1|//PREDICTED: pentatricopeptide repeat-containing protein At2g03880, mitochondrial [Solanum lycopersicum]
Solyc03g063240.3.1	2011	2064.13907432881	944.264695976131	-1.12827694047878	0.000241581637643363	Down	4.6158769739074e-05	NA	GO:0000166//nucleotide binding	NA	NA	gi|460378108|ref|XP_004234820.1|//PREDICTED: uncharacterized protein LOC101267492 [Solanum lycopersicum]
Solyc02g088270.3.1	3937	98.1007648753	582.299686375304	2.56942555168855	2.33116977903296e-06	Up	2.93003745896046e-07	NA	NA	NA	NA	gi|460372787|ref|XP_004232206.1|//PREDICTED: uncharacterized protein At5g39570 [Solanum lycopersicum]
Solyc07g008600.1.1	2985	117.960480209709	546.292646415179	2.21137040256325	0.0275693964212302	Up	0.00934531426325731	NA	NA	NA	K04567//lysyl-tRNA synthetase, class II [EC:6.1.1.6];K13466//EIX receptor 1/2;K10406//kinesin family member C2/C3	gi|723712990|ref|XP_004242808.2|//PREDICTED: probable leucine-rich repeat receptor-like protein kinase At2g33170 [Solanum lycopersicum]
Solyc01g098790.2.1	4512	30.3664424893682	183.831473034418	2.59783397778603	5.52044938541791e-05	Up	9.13396584115369e-06	NA	NA	NA	K13754//solute carrier family 24 (sodium/potassium/calcium exchanger), member 6	gi|460370857|ref|XP_004231265.1|//PREDICTED: uncharacterized protein LOC101262870 [Solanum lycopersicum]
Solyc10g054870.2.1	2361	9915.93639650421	577.315748891814	-4.10231653060682	7.99488091013283e-37	Down	3.33765715645921e-39	GO:0009536//plastid	GO:0016861//intramolecular oxidoreductase activity, interconverting aldoses and ketoses	GO:0015977//carbon fixation	K01803//triosephosphate isomerase (TIM) [EC:5.3.1.1]	gi|460406425|ref|XP_004248665.1|//PREDICTED: triosephosphate isomerase, chloroplastic [Solanum lycopersicum]
Solyc07g064160.3.1	1457	14133.0862111567	1092.50457587465	-3.69336531076521	3.52619925820137e-07	Down	3.79459417713857e-08	GO:0009941//chloroplast envelope	NA	GO:0006772//thiamine metabolic process	K03146//thiamine thiazole synthase	gi|460397188|ref|XP_004244150.1|//PREDICTED: thiamine thiazole synthase, chloroplastic [Solanum lycopersicum]
Solyc01g108520.2.1	948	40.5915034373597	4.60831741512726	-3.13886577955171	0.000711903569906911	Down	0.000152474948288546	NA	NA	NA	K13258//2-hydroxyisoflavanone dehydratase [EC:4.2.1.105];K20506//tuliposide A-converting enzyme [EC:4.2.99.22]	gi|723665568|ref|XP_010315268.1|//PREDICTED: 2-hydroxyisoflavanone dehydratase-like [Solanum lycopersicum]
Solyc12g008500.2.1	3131	416.812372504052	2743.03806049253	2.71830463237047	0.000410049659070916	Up	8.27191275865439e-05	NA	NA	NA	K00924	gi|460412506|ref|XP_004251639.1|//PREDICTED: receptor-like protein kinase 5 [Solanum lycopersicum]
Solyc03g078240.2.1	2639	17.3847552693135	1.90002966453847	-3.19372890976704	0.0312533342696901	Down	0.0108130851607001	NA	NA	NA	K13080//flavanone 7-O-glucoside 2''-O-beta-L-rhamnosyltransferase [EC:2.4.1.236]	gi|970012956|ref|XP_015067432.1|//PREDICTED: beta-D-glucosyl crocetin beta-1,6-glucosyltransferase-like [Solanum pennellii]
Solyc04g015950.2.1	3082	765.219445338856	181.174191952266	-2.07849607529791	5.32740725334948e-12	Down	2.64106591879932e-13	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial	gi|698586533|ref|XP_009778941.1|//PREDICTED: pentatricopeptide repeat-containing protein At2g41720 [Nicotiana sylvestris];gi|723688862|ref|XP_004236606.2|//PREDICTED: pentatricopeptide repeat-containing protein At2g41720 isoform X1 [Solanum lycopersicum];gi|970024287|ref|XP_015073454.1|//PREDICTED: pentatricopeptide repeat-containing protein At2g41720 [Solanum pennellii];gi|697125986|ref|XP_009617024.1|//PREDICTED: pentatricopeptide repeat-containing protein At2g41720 isoform X1 [Nicotiana tomentosiformis]
Solyc11g069280.2.1	1647	20.4913489244115	1.46818038812586	-3.80291381755486	0.000887041584094902	Down	0.000194846282058717	NA	NA	NA	NA	gi|460411445|ref|XP_004251121.1|//PREDICTED: uncharacterized protein LOC101254662 [Solanum lycopersicum]
Solyc08g068850.3.1	1495	55.8436639601601	275.865570369156	2.30449990470832	0.0174247852812246	Up	0.0054869757736613	NA	NA	NA	NA	gi|460399529|ref|XP_004245291.1|//PREDICTED: uncharacterized protein LOC101268894 isoform X1 [Solanum lycopersicum];gi|460399531|ref|XP_004245292.1|//PREDICTED: uncharacterized protein LOC101268894 isoform X2 [Solanum lycopersicum]
Solyc00g280110.2.1	249	13.057247962392	1.35238268826508	-3.27127549759	0.0266980931744801	Down	0.00901314409875003	NA	NA	NA	NA	gi|723754898|ref|XP_010315066.1|//PREDICTED: uncharacterized protein LOC104645376 [Solanum lycopersicum]
Solyc01g094170.3.1	2040	106.983239956615	359.949194898861	1.75040849038186	0.000181288443414203	Up	3.3763066067796e-05	NA	NA	NA	K09480//digalactosyldiacylglycerol synthase [EC:2.4.1.241]	gi|460368124|ref|XP_004229919.1|//PREDICTED: digalactosyldiacylglycerol synthase 2, chloroplastic [Solanum lycopersicum]
Solyc02g014460.3.1	3630	801.640069878016	52.9751666847085	-3.91956649615339	5.09474375266287e-19	Down	1.0433227950353e-20	NA	NA	NA	K10140//DNA damage-binding protein 2;K08678//UDP-glucuronate decarboxylase [EC:4.1.1.35]	gi|460371322|ref|XP_004231489.1|//PREDICTED: WD repeat-containing protein 76 [Solanum lycopersicum]
Solyc09g010130.3.1	1778	1198.19790180357	3082.49309700663	1.36323145155718	1.43427903103086e-07	Up	1.43598981562133e-08	NA	GO:0005543//phospholipid binding	GO:0009987//cellular process	K17917//sorting nexin-1/2	gi|723727684|ref|XP_004246487.2|//PREDICTED: LOW QUALITY PROTEIN: sorting nexin 1 [Solanum lycopersicum]
Solyc04g009500.3.1	4713	1580.79553061156	3705.3806598747	1.22897098748425	0.013892834745559	Up	0.00423703495930235	NA	NA	NA	K14972//PAX-interacting protein 1	gi|460382187|ref|XP_004236821.1|//PREDICTED: mediator of RNA polymerase II transcription subunit 15a isoform X1 [Solanum lycopersicum];gi|698554425|ref|XP_009770211.1|//PREDICTED: mediator of RNA polymerase II transcription subunit 15a isoform X2 [Nicotiana sylvestris]
Solyc09g082950.1.1	975	866.037324248332	2139.80304818575	1.30497690586317	0.025972906312498	Up	0.00872669515062087	NA	NA	NA	K19747//BAHD acyltransferase [EC:2.3.1.-];K18810//cyclin D1/2/4, plant;K15178//RNA polymerase-associated protein RTF1;K05747//Wiskott-Aldrich syndrome protein	gi|460404292|ref|XP_004247617.1|//PREDICTED: formin-like protein 14 [Solanum lycopersicum]
Solyc09g010980.1.1	228	47.740265315664	393.603940137694	3.04346617341522	2.57956516803397e-06	Up	3.27589776632315e-07	NA	NA	NA	NA	gi|697176544|ref|XP_009597230.1|//PREDICTED: uncharacterized protein LOC104093208 [Nicotiana tomentosiformis]
Solyc02g093360.3.1	7431	961.838281228583	2284.56168587088	1.24805114571777	0.00721649935123503	Up	0.00202765663148985	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process	K08286//protein-serine/threonine kinase [EC:2.7.11.-]	gi|460375613|ref|XP_004233599.1|//PREDICTED: putative pentatricopeptide repeat-containing protein At3g01580 [Solanum lycopersicum]
Solyc10g086720.2.1	1859	22.4810800095671	4.70413200902506	-2.25671089420343	0.034636506325615	Down	0.012150147645384	NA	GO:0042578//phosphoric ester hydrolase activity;GO:0016491//oxidoreductase activity	GO:0005975//carbohydrate metabolic process	K03841//fructose-1,6-bisphosphatase I [EC:3.1.3.11]	gi|565365568|ref|XP_006349477.1|//PREDICTED: fructose-1,6-bisphosphatase, chloroplastic-like [Solanum tuberosum]
Solyc02g071740.3.1	2126	1000.43880166961	5053.32649708269	2.33660047782705	2.42721778377043e-10	Up	1.55433135251141e-11	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0007165//signal transduction;GO:0006464//cellular protein modification process	K06272//integrin-linked kinase [EC:2.7.11.1]	gi|460374361|ref|XP_004232979.1|//PREDICTED: serine/threonine-protein kinase HT1-like [Solanum lycopersicum]
Solyc12g096690.2.1	1631	704.969270901693	1617.13422602373	1.19780715296801	0.000394534543413687	Up	7.9206912584841e-05	GO:0005829//cytosol	GO:0046872//metal ion binding;GO:0005524//ATP binding;GO:0051539//4 iron, 4 sulfur cluster binding;GO:0042803//protein homodimerization activity	GO:0016226//iron-sulfur cluster assembly	K03593//ATP-binding protein involved in chromosome partitioning	gi|460415381|ref|XP_004253037.1|//PREDICTED: cytosolic Fe-S cluster assembly factor NBP35 [Solanum lycopersicum]
Solyc01g096050.3.1	1842	1428.26026323582	6304.77442456826	2.14218585707783	5.47799643664113e-11	Up	3.17916094876592e-12	GO:0043231//intracellular membrane-bounded organelle	NA	NA	K13422//transcription factor MYC2	gi|460368271|ref|XP_004229991.1|//PREDICTED: transcription factor bHLH13-like [Solanum lycopersicum]
Solyc03g007030.3.1	620	2613.78776489204	182.89445902298	-3.83705872859146	3.14131499059199e-09	Down	2.39568006215566e-10	GO:0043227//membrane-bounded organelle	GO:0051536//iron-sulfur cluster binding	NA	NA	gi|460376732|ref|XP_004234151.1|//PREDICTED: CDGSH iron-sulfur domain-containing protein NEET [Solanum lycopersicum]
BGI_novel_G000378	758	0.768616043902199	10.3355861455709	3.74921330693884	0.00859897629850417	Up	0.00246353555353746	NA	NA	NA	NA	gi|460366200|ref|XP_004228977.1|//PREDICTED: uncharacterized protein LOC101245090 [Solanum lycopersicum]
Solyc02g072170.3.1	533	26.1542481106718	7.1757805092698	-1.86583762832897	0.00687459077932786	Down	0.00191544528386297	NA	NA	NA	NA	gi|460374568|ref|XP_004233082.1|//PREDICTED: uncharacterized protein LOC101259111 [Solanum lycopersicum]
Solyc01g112040.2.1	812	339.820032863126	2121.63786766323	2.64233562145094	4.43125879563687e-10	Up	2.96980889911849e-11	NA	NA	NA	NA	NA
Solyc05g012120.3.1	1282	545.890719315815	202.639411653243	-1.42969737662132	0.000404514553853709	Down	8.14668307168477e-05	NA	NA	NA	NA	gi|460387588|ref|XP_004239458.1|//PREDICTED: uncharacterized protein LOC101261710 [Solanum lycopersicum]
Solyc12g062160.1.1	627	2.89768661332287	21.5848910291449	2.89704832935857	0.00782275295654551	Up	0.00221724368128716	NA	NA	NA	NA	gi|723750036|ref|XP_010314561.1|//PREDICTED: uncharacterized protein LOC104645174 [Solanum lycopersicum]
Solyc10g078320.2.1	3956	259.199904348848	79.8636475197138	-1.69845431670754	5.30360126376602e-05	Down	8.73192440064654e-06	NA	NA	NA	K14575//AAA family ATPase	gi|723737924|ref|XP_010327746.1|//PREDICTED: calmodulin-interacting protein 111 isoform X1 [Solanum lycopersicum]
Solyc04g040130.1.1	1128	78.8313630922873	3299.22632520549	5.38721421845633	9.57254063412437e-12	Up	4.90615900250522e-13	NA	GO:0016705//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	GO:0044238//primary metabolic process	K10256//omega-6 fatty acid desaturase / acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.6 1.14.19.22]	gi|970023105|ref|XP_015072887.1|//PREDICTED: delta(12)-fatty-acid desaturase FAD2-like [Solanum pennellii]
Solyc12g008470.2.1	821	509.061616060102	166.170203603023	-1.61517857650553	0.00372364400538283	Down	0.000961862716464253	NA	GO:0046872//metal ion binding;GO:0020037//heme binding;GO:0005506//iron ion binding	NA	K10534//nitrate reductase (NAD(P)H) [EC:1.7.1.1 1.7.1.2 1.7.1.3]	gi|460412498|ref|XP_004251635.1|//PREDICTED: cytochrome b5 [Solanum lycopersicum]
Solyc03g031940.3.1	2102	344.206997691971	34.3548779791475	-3.32468956348389	0.00018826634476098	Down	3.5185904749946e-05	NA	GO:0016405//CoA-ligase activity	NA	K00666//fatty-acyl-CoA synthase [EC:6.2.1.-];K01904//4-coumarate--CoA ligase [EC:6.2.1.12]	gi|460377432|ref|XP_004234497.1|//PREDICTED: probable acyl-activating enzyme 9 [Solanum lycopersicum]
Solyc10g050325.1.1	2232	0.992756401676591	45.3177543568406	5.51249280360539	0.000259437227940689	Up	5.00152580479067e-05	NA	NA	NA	NA	gi|723750383|ref|XP_004252246.2|//PREDICTED: myosin-2 heavy chain [Solanum lycopersicum]
Solyc01g096220.3.1	1413	290.021279310939	59.2820603810746	-2.29049126159713	0.00252480371552061	Down	0.000620660522732161	NA	GO:0032561//guanyl ribonucleotide binding;GO:0003824//catalytic activity	GO:0006810//transport;GO:0035556//intracellular signal transduction	K07904//Ras-related protein Rab-11A	gi|460368304|ref|XP_004230007.1|//PREDICTED: ras-related protein RABA3 [Solanum lycopersicum]
Solyc01g109710.3.1	1132	416.02377742233	25203.2828465019	5.92080186706247	9.76440610856632e-41	Up	2.8753096860621e-43	NA	NA	GO:0050896//response to stimulus	NA	gi|460370180|ref|XP_004230932.1|//PREDICTED: uncharacterized protein LOC101259002 [Solanum lycopersicum]
Solyc00g179240.2.1	300	84.8176780318368	32.5251914614786	-1.38280743878712	0.0200452640938536	Down	0.00645187324625114	GO:0043231//intracellular membrane-bounded organelle	GO:0003677//DNA binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0006351//transcription, DNA-templated	K09260//MADS-box transcription enhancer factor 2A	gi|590722732|ref|XP_007051979.1|//AGAMOUS-like 20 isoform 2 [Theobroma cacao]
Solyc04g071565.1.1	829	1479.99995014469	480.099152423223	-1.62419283310725	0.000114396531673077	Down	2.02841919326386e-05	GO:0009532//plastid stroma;GO:0031976//plastid thylakoid	GO:0015036//disulfide oxidoreductase activity;GO:0030234//enzyme regulator activity	GO:0019725//cellular homeostasis;GO:0018904//ether metabolic process;GO:0044093//positive regulation of molecular function	K03671//thioredoxin 1	gi|460384202|ref|XP_004237802.1|//PREDICTED: thioredoxin Y1, chloroplastic [Solanum lycopersicum]
Solyc02g083860.3.1	1311	2428.20108877826	294.85670553308	-3.04180199279354	1.3500833510269e-14	Down	4.62977740772606e-16	NA	GO:0043169//cation binding;GO:0016701//oxidoreductase activity, acting on single donors with incorporation of molecular oxygen;GO:0019842//vitamin binding;GO:0016706//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	GO:0009699//phenylpropanoid biosynthetic process	K00475//naringenin 3-dioxygenase [EC:1.14.11.9]	gi|460373360|ref|XP_004232488.1|//PREDICTED: naringenin,2-oxoglutarate 3-dioxygenase [Solanum lycopersicum]
Solyc12g096550.2.1	2166	4824.41222533965	511.52685441605	-3.23747129814717	3.72840267892849e-21	Down	6.08707459881719e-23	GO:0016021//integral component of membrane;GO:0009941//chloroplast envelope	GO:0016709//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen;GO:0043169//cation binding;GO:0051537//2 iron, 2 sulfur cluster binding;GO:0046872//metal ion binding;GO:0010277//chlorophyllide a oxygenase [overall] activity;GO:0016703//oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases);GO:0051536//iron-sulfur cluster binding	GO:0008152//metabolic process;GO:0045036//protein targeting to chloroplast;GO:0055114//oxidation-reduction process	K13071//pheophorbide a oxygenase [EC:1.14.15.17]	gi|460415401|ref|XP_004253047.1|//PREDICTED: protein TIC 55, chloroplastic [Solanum lycopersicum]
Solyc02g094250.3.1	2214	35.9883401752891	13.8051186711875	-1.38232627536417	0.0205019977753579	Down	0.00662409858046825	NA	NA	NA	NA	gi|565387101|ref|XP_006359343.1|//PREDICTED: uncharacterized protein LOC102578926 [Solanum tuberosum]
Solyc01g010910.2.1	2097	59.3598283422545	6.7030941926545	-3.14658780793783	0.0254748611963569	Down	0.00853846547926202	NA	NA	NA	K09422//myb proto-oncogene protein, plant	gi|460364959|ref|XP_004228373.1|//PREDICTED: myb-related protein 315-like [Solanum lycopersicum]
Solyc02g049070.3.1	1415	2930.64306704504	814.977474334123	-1.84638517853862	8.93477483361272e-07	Down	1.03675093398824e-07	NA	NA	NA	NA	gi|460371797|ref|XP_004231721.1|//PREDICTED: uncharacterized protein LOC101268332 [Solanum lycopersicum]
Solyc01g107320.3.1	2460	550.699359380272	49.3947384813003	-3.47883565073648	4.69314369672991e-09	Down	3.69636671805215e-10	NA	NA	NA	K17710//pentatricopeptide repeat domain-containing protein 1	gi|460369740|ref|XP_004230715.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g02860 [Solanum lycopersicum]
Solyc04g076410.3.1	1812	175.29674065622	369.383060064012	1.07531853383589	0.0110085434672646	Up	0.00325767208090851	NA	NA	NA	K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]	gi|460384612|ref|XP_004238004.1|//PREDICTED: uncharacterized protein LOC101257364 [Solanum lycopersicum]
Solyc03g120520.2.1	1690	251.028235710065	115.675776280039	-1.11776286734078	0.00795979147069096	Down	0.0022611290740322	NA	NA	NA	K06664//peroxin-2	gi|460379876|ref|XP_004235686.1|//PREDICTED: uncharacterized protein LOC101267975 [Solanum lycopersicum]
Solyc02g061820.3.1	1779	1661.55648246652	596.020996938981	-1.47910027570829	8.8201056908118e-10	Down	6.21036963245247e-11	NA	NA	NA	K12897//transformer-2 protein	gi|970007677|ref|XP_015064736.1|//PREDICTED: ankyrin repeat domain-containing protein, chloroplastic [Solanum pennellii]
Solyc04g071940.3.1	1300	1249.63727517661	450.948785454553	-1.47047389300474	1.04011149619911e-05	Down	1.48332584779253e-06	NA	GO:0004312//fatty acid synthase activity	GO:0008152//metabolic process	K09841//xanthoxin dehydrogenase [EC:1.1.1.288]	gi|460384255|ref|XP_004237828.1|//PREDICTED: xanthoxin dehydrogenase-like [Solanum lycopersicum]
Solyc04g011380.3.1	4536	2189.67787023309	1047.59877302739	-1.06363237136417	4.49782747413189e-06	Down	5.94501872046805e-07	NA	NA	NA	NA	gi|460382057|ref|XP_004236756.1|//PREDICTED: uncharacterized protein LOC101263805 isoform X2 [Solanum lycopersicum]
Solyc08g082390.3.1	2593	2173.28389010931	917.82496903587	-1.24358568182377	0.00158347910800494	Down	0.000368600977690878	NA	NA	NA	NA	gi|460399976|ref|XP_004245512.1|//PREDICTED: uncharacterized protein LOC101255121 [Solanum lycopersicum]
Solyc08g013900.3.1	6141	358.896939998499	750.188318648393	1.06368317604139	0.0207396102990173	Up	0.00671710428985245	NA	NA	NA	K14833//nucleolar complex protein 2	gi|460398387|ref|XP_004244743.1|//PREDICTED: protein NLP9-like [Solanum lycopersicum]
BGI_novel_G000433	782	432.338778809656	169.97915870412	-1.34680437809571	0.00454871448519136	Down	0.00120296441301747	NA	GO:0008233//peptidase activity;GO:0004869//cysteine-type endopeptidase inhibitor activity	GO:0010951//negative regulation of endopeptidase activity	K13899//cystatin-C	gi|698531886|ref|XP_009762773.1|//PREDICTED: cysteine proteinase inhibitor 1-like [Nicotiana sylvestris]
Solyc01g094220.3.1	1151	391.266052171733	52.5308323650474	-2.89691359192649	6.24122701149144e-07	Down	6.99776757513279e-08	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K15095//(+)-neomenthol dehydrogenase [EC:1.1.1.208]	gi|723660951|ref|XP_010326194.1|//PREDICTED: (+)-neomenthol dehydrogenase isoform X1 [Solanum lycopersicum]
Solyc03g025390.3.1	1359	2457.47753344105	617.015206810027	-1.99380027608803	0.00236085216717223	Down	0.000574901118537951	NA	GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	GO:0008152//metabolic process	K19329//WW domain-containing oxidoreductase	gi|460377272|ref|XP_004234417.1|//PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Solanum lycopersicum]
Solyc10g009570.3.1	1983	6124.69616150239	1223.96231770821	-2.32307913332939	2.18794259796579e-09	Down	1.63435103858783e-10	NA	NA	NA	K17525//chitinase domain-containing protein 1	gi|723733765|ref|XP_004248078.2|//PREDICTED: rhodanese-like domain-containing protein 4, chloroplastic [Solanum lycopersicum]
Solyc02g063541.1.1	1404	9.3033544429862	65.0615531342374	2.80598236525543	0.00419075002820746	Up	0.0010972054643704	NA	GO:0016846//carbon-sulfur lyase activity;GO:0048037//cofactor binding;GO:0016740//transferase activity	GO:0008652//cellular amino acid biosynthetic process	K01762//1-aminocyclopropane-1-carboxylate synthase [EC:4.4.1.14]	gi|350538503|ref|NP_001234346.1|//1-aminocyclopropane-1-carboxylate synthase [Solanum lycopersicum]
Solyc10g080840.1.1	1530	700.949588807053	81.1792490436932	-3.11012779218314	9.97853613819376e-07	Down	1.17082743551029e-07	NA	NA	NA	K15405//midchain alkane hydroxylase	gi|460407752|ref|XP_004249314.1|//PREDICTED: cytochrome P450 86B1-like [Solanum lycopersicum]
Solyc02g079920.3.1	1522	103.625540906969	399.415565077245	1.94651092281771	0.00100938357530397	Up	0.000224466319153998	NA	NA	NA	NA	gi|460373914|ref|XP_004232757.1|//PREDICTED: uncharacterized protein LOC101266475 [Solanum lycopersicum]
Solyc09g064310.3.1	2363	76.4353832500754	21.5582849457796	-1.82599823110571	0.0103254507526111	Down	0.00302743386089305	NA	NA	NA	K14963//COMPASS component SWD3	gi|460403285|ref|XP_004247123.1|//PREDICTED: WD repeat-containing protein 26 [Solanum lycopersicum];gi|565378938|ref|XP_006355901.1|//PREDICTED: WD repeat-containing protein 26 [Solanum tuberosum]
Solyc06g050170.3.1	2977	1038.43501370171	263.629415690765	-1.97782767379574	0.0266632685571613	Down	0.00899580414749934	NA	NA	NA	K03549//KUP system potassium uptake protein	gi|723705872|ref|XP_010322136.1|//PREDICTED: potassium transporter 2 isoform X1 [Solanum lycopersicum];gi|723705875|ref|XP_010322137.1|//PREDICTED: potassium transporter 2 isoform X2 [Solanum lycopersicum]
Solyc02g087950.3.1	7154	418.892762119562	1383.13846572262	1.72329272985594	4.80460263157344e-05	Up	7.82082141496988e-06	NA	NA	NA	NA	gi|460372818|ref|XP_004232221.1|//PREDICTED: uncharacterized protein LOC101253548 isoform X1 [Solanum lycopersicum]
Solyc05g047550.3.1	3658	35.9673576964983	5.29566951502831	-2.76380318100794	0.0186177888460017	Down	0.00592510366658575	NA	GO:0004672//protein kinase activity	NA	K17609//nucleoredoxin [EC:1.8.1.8]	gi|723703314|ref|XP_010321639.1|//PREDICTED: U-box domain-containing protein 35-like [Solanum lycopersicum]
Solyc05g056050.3.1	985	18257.2180914292	1366.03371915825	-3.74040195353459	3.62175154419802e-13	Down	1.51468809922103e-14	GO:0031224//intrinsic component of membrane;GO:0009521//photosystem;GO:0009534//chloroplast thylakoid	GO:0043169//cation binding;GO:0046906//tetrapyrrole binding	GO:0006464//cellular protein modification process;GO:0006091//generation of precursor metabolites and energy	K08907//light-harvesting complex I chlorophyll a/b binding protein 1	gi|460388027|ref|XP_004239673.1|//PREDICTED: chlorophyll a-b binding protein 6A, chloroplastic [Solanum lycopersicum]
Solyc05g014110.3.1	1914	757.952502461191	198.951171527323	-1.92969304950605	2.74425438924871e-13	Down	1.121105863507e-14	NA	NA	NA	K06889//uncharacterized protein	gi|723699046|ref|XP_010320961.1|//PREDICTED: uncharacterized protein LOC101253588 isoform X1 [Solanum lycopersicum];gi|970030449|ref|XP_015076507.1|//PREDICTED: uncharacterized protein LOC107020591 isoform X2 [Solanum pennellii];gi|970030447|ref|XP_015076506.1|//PREDICTED: uncharacterized protein LOC107020591 isoform X1 [Solanum pennellii]
Solyc02g076690.3.1	1902	850.44130676518	119.813822465148	-2.82741731570889	8.58718168431698e-10	Down	6.02715935275416e-11	NA	NA	NA	K16290//xylem cysteine proteinase [EC:3.4.22.-];K16292//KDEL-tailed cysteine endopeptidase [EC:3.4.22.-]	gi|460374489|ref|XP_004233043.1|//PREDICTED: low-temperature-induced cysteine proteinase-like [Solanum lycopersicum]
Solyc09g090310.2.1	3149	10.7195304530702	0.755475153601438	-3.82671359449035	0.00581952102767158	Down	0.00158958737478669	NA	NA	NA	K10398//kinesin family member 11	gi|460404930|ref|XP_004247931.1|//PREDICTED: kinesin-II 95 kDa subunit [Solanum lycopersicum]
Solyc06g084180.3.1	896	10.3883266190073	85.2279007515781	3.03636251809925	3.86713083456709e-07	Up	4.18742175131109e-08	NA	NA	NA	NA	gi|970033574|ref|XP_015078086.1|//PREDICTED: uncharacterized protein LOC107021881 [Solanum pennellii]
Solyc06g060870.1.1	1557	0.503995555041279	148.801740652822	8.20576467754456	1.51509831029258e-12	Up	6.94636544528057e-14	NA	NA	NA	K16818//phospholipase A1 [EC:3.1.1.32]	gi|460392773|ref|XP_004241988.1|//PREDICTED: phospholipase A1-Ibeta2, chloroplastic-like [Solanum lycopersicum]
Solyc07g049730.3.1	1209	1248.95763366859	5454.94986862807	2.12684139853149	3.66748690948914e-08	Up	3.29866032227422e-09	NA	NA	NA	K16569//gamma-tubulin complex component 2	gi|460395844|ref|XP_004243490.1|//PREDICTED: uncharacterized protein LOC101260358 [Solanum lycopersicum]
Solyc04g009690.2.1	2547	18.2192700628841	4.36038445498847	-2.06293791203289	0.0324734298397081	Down	0.0112991869409829	NA	NA	NA	K13457//disease resistance protein RPM1	gi|302594435|gb|ADL59407.1|//SNKR2GH6 protein [Solanum schenckii]
Solyc05g008090.3.1	2795	477.181152619119	1638.58430246082	1.77984093240068	1.25316337333072e-08	Up	1.05006383750092e-09	NA	NA	NA	NA	gi|460386304|ref|XP_004238839.1|//PREDICTED: uncharacterized protein LOC101253184 [Solanum lycopersicum]
Solyc02g091640.3.1	1899	971.856701627832	386.688472579674	-1.32957184950824	0.000279101919797758	Down	5.42016177928402e-05	NA	NA	NA	NA	gi|460372317|ref|XP_004231977.1|//PREDICTED: uncharacterized protein At4g37920, chloroplastic [Solanum lycopersicum]
Solyc11g069470.2.1	4015	980.168160337534	396.388735755289	-1.30611331737813	0.00015297886256223	Down	2.8049165981199e-05	GO:0043231//intracellular membrane-bounded organelle;GO:0005634//nucleus	GO:0008289//lipid binding;GO:0003677//DNA binding;GO:0044212//transcription regulatory region DNA binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0010051//xylem and phloem pattern formation;GO:0009855//determination of bilateral symmetry;GO:0030154//cell differentiation;GO:0006351//transcription, DNA-templated;GO:0009956//radial pattern formation;GO:0010014//meristem initiation;GO:0010089//xylem development;GO:0009944//polarity specification of adaxial/abaxial axis	K09338//homeobox-leucine zipper protein	gi|460411479|ref|XP_004251138.1|//PREDICTED: homeobox-leucine zipper protein REVOLUTA [Solanum lycopersicum]
Solyc11g010900.2.1	1088	466.240820866251	85.1531052659367	-2.45294427600791	1.26548801785767e-08	Down	1.06180614589146e-09	NA	NA	NA	K03437//RNA methyltransferase, TrmH family	gi|460409475|ref|XP_004250164.1|//PREDICTED: rRNA methyltransferase 3A, mitochondrial [Solanum lycopersicum]
Solyc09g090560.1.1	867	45.366619403219	99.837492646012	1.13795054431006	0.0317833443211366	Up	0.0110201531562253	NA	NA	NA	NA	gi|460404588|ref|XP_004247763.1|//PREDICTED: uncharacterized protein LOC101261959 [Solanum lycopersicum]
Solyc10g078770.2.1	369	12.8139420682284	53.2673695411182	2.05553766601842	0.0211292655842747	Up	0.00686378222629171	NA	NA	GO:0007275//multicellular organism development	NA	gi|823683794|ref|NP_001296314.1|//protein LE25 [Solanum lycopersicum]
Solyc09g074660.3.1	2029	1293.1678509612	398.368467918409	-1.69873418331863	3.70364390113691e-07	Down	3.9979695607919e-08	NA	NA	NA	K00943//dTMP kinase [EC:2.7.4.9]	gi|698574776|ref|XP_009775752.1|//PREDICTED: spermatogenesis-associated protein 20 isoform X1 [Nicotiana sylvestris];gi|460403951|ref|XP_004247449.1|//PREDICTED: spermatogenesis-associated protein 20 [Solanum lycopersicum]
Solyc08g079140.1.1	447	3.84445273081198	59.5337986653152	3.95285880513628	2.41998293131015e-08	Up	2.10535267693376e-09	NA	NA	NA	K14488//SAUR family protein	gi|723724877|ref|XP_010325465.1|//PREDICTED: auxin-induced protein X10A-like [Solanum lycopersicum]
Solyc10g054030.2.1	2008	662.179385213396	3752.532983993	2.50257074993313	1.64807539753509e-11	Up	8.76008467602892e-13	NA	NA	NA	NA	gi|460406490|ref|XP_004248697.1|//PREDICTED: uncharacterized protein LOC101260184 [Solanum lycopersicum]
Solyc04g074770.2.1	1095	794.05540412778	15240.8910441808	4.2625637679135	4.45248070238473e-12	Up	2.17910659096137e-13	NA	NA	NA	NA	gi|565395360|ref|XP_006363309.1|//PREDICTED: uncharacterized protein LOC102591088 [Solanum tuberosum]
Solyc09g091430.3.1	1973	2229.21086158908	427.174335571182	-2.38363620960458	0.00124214667027499	Down	0.000281645228689532	NA	GO:0003824//catalytic activity	NA	K01728//pectate lyase [EC:4.2.2.2]	gi|460404708|ref|XP_004247823.1|//PREDICTED: probable pectate lyase 8 [Solanum lycopersicum]
Solyc11g007570.2.1	1162	128.239164226922	326.17927502836	1.34682818999167	0.000665060718771974	Up	0.000141301852430306	NA	NA	NA	K20896	gi|723741049|ref|XP_010312567.1|//PREDICTED: seed maturation protein PM36-like [Solanum lycopersicum]
Solyc07g005930.3.1	3149	1482.38956375546	294.40457457491	-2.33205263587561	2.35847998245188e-08	Down	2.04920860261493e-09	GO:0009536//plastid;GO:0009507//chloroplast	GO:0003899//DNA-directed RNA polymerase activity;GO:0003677//DNA binding;GO:0034062//RNA polymerase activity;GO:0003676//nucleic acid binding	GO:0010467//gene expression;GO:0006351//transcription, DNA-templated	K10908//DNA-directed RNA polymerase, mitochondrial [EC:2.7.7.6]	gi|460394832|ref|XP_004242994.1|//PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Solanum lycopersicum];gi|970039693|ref|XP_015081184.1|//PREDICTED: DNA-directed RNA polymerase 3, chloroplastic [Solanum pennellii]
Solyc04g081530.1.1	468	226.20872431873	3470.67101061865	3.93948813998203	6.55401825821527e-13	Up	2.84118206139271e-14	NA	GO:0005515//protein binding	NA	K03686//molecular chaperone DnaJ	gi|934635627|ref|NP_001234377.2|//DNAJ-like protein [Solanum lycopersicum]
Solyc12g009920.1.1	627	84.3103750219738	7.90481609157417	-3.41490637324141	5.21594065582265e-08	Down	4.82554223488588e-09	NA	NA	NA	K13495//cis-zeatin O-glucosyltransferase [EC:2.4.1.215]	gi|460413406|ref|XP_004252080.1|//PREDICTED: zeatin O-glucosyltransferase-like [Solanum lycopersicum]
Solyc02g068190.1.1	1989	7.82249272171109	32.8454440717683	2.06999295472551	0.0162225550725852	Up	0.00505397775818799	NA	GO:0032559//adenyl ribonucleotide binding;GO:0042623//ATPase activity, coupled	NA	K12858//ATP-dependent RNA helicase DDX23/PRP28 [EC:3.6.4.13]	gi|460374978|ref|XP_004233285.1|//PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Solanum lycopersicum]
Solyc10g077010.2.1	763	1274.21287495002	2689.73955512304	1.0778601648164	0.0196438255751271	Up	0.0063030195116624	NA	GO:0046872//metal ion binding	NA	K02183//calmodulin	gi|923681636|ref|XP_013653706.1|//PREDICTED: calmodulin-like [Brassica napus]
Solyc07g008920.3.1	1594	72.7318650107887	615.469596026089	3.08102811398465	2.05292148312331e-19	Up	4.07860127666886e-21	NA	NA	NA	K20464//oxysterol-binding protein-related protein 5/8	gi|723713085|ref|XP_010323355.1|//PREDICTED: oxysterol-binding protein-related protein 4C [Solanum lycopersicum]
BGI_novel_G000436	2413	412.084696753932	167.130500027004	-1.30196585030806	0.00247060131766768	Down	0.000605678577094839	NA	NA	NA	NA	NA
Solyc02g090530.3.1	2991	860.503866757485	2114.35220523622	1.29696213817121	0.000234951816454404	Up	4.4795681421063e-05	NA	NA	NA	K11517//(S)-2-hydroxy-acid oxidase [EC:1.1.3.15]	gi|460372458|ref|XP_004232047.1|//PREDICTED: zinc finger CCCH domain-containing protein 62 isoform X1 [Solanum lycopersicum]
Solyc03g096830.3.1	4326	605.476644932143	82.0617867958594	-2.8832888392565	1.05476385135095e-09	Down	7.49751999599769e-11	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial	gi|723683595|ref|XP_010318267.1|//PREDICTED: pentatricopeptide repeat-containing protein At3g18110, chloroplastic [Solanum lycopersicum];gi|565361621|ref|XP_006347554.1|//PREDICTED: pentatricopeptide repeat-containing protein At3g18110, chloroplastic [Solanum tuberosum]
Solyc01g106580.2.1	1315	643.547175020633	306.074407613879	-1.07216348954061	0.044848563824494	Down	0.0164696604591813	NA	NA	NA	K01188//beta-glucosidase [EC:3.2.1.21]	gi|460369642|ref|XP_004230666.1|//PREDICTED: uncharacterized protein At3g49720-like [Solanum lycopersicum]
Solyc07g062140.3.1	6205	3970.71010016468	1788.51739976566	-1.15063288036272	0.00502224920856512	Down	0.00134204952199953	NA	GO:0003825//alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity;GO:0035251//UDP-glucosyltransferase activity	GO:0005992//trehalose biosynthetic process;GO:0005991//trehalose metabolic process	K16055//trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12]	gi|350538961|ref|NP_001234879.1|//trehalose-phosphate synthase 1 [Solanum lycopersicum]
Solyc02g087120.3.1	3699	47.2079331697273	201.407010281701	2.09301267324313	4.37307724700074e-06	Up	5.75893913584822e-07	NA	NA	NA	K10529//alpha-dioxygenase [EC:1.-.-.-]	gi|460375812|ref|XP_004233698.1|//PREDICTED: protein ALTERED XYLOGLUCAN 4-like [Solanum lycopersicum]
Solyc02g077950.2.1	1843	267.383619660549	46.9950803452907	-2.50832944432678	0.0152946850096191	Down	0.00473184305873858	NA	NA	NA	K16222//Dof zinc finger protein DOF5.5	gi|460374197|ref|XP_004232898.1|//PREDICTED: dof zinc finger protein DOF1.4 [Solanum lycopersicum]
Solyc08g075710.3.1	2159	751.235237402773	3884.26739928001	2.37030588097349	1.32696994051805e-14	Up	4.5356770368833e-16	NA	NA	NA	K03294//basic amino acid/polyamine antiporter, APA family;K13863//solute carrier family 7 (cationic amino acid transporter), member 1;K11584//serine/threonine-protein phosphatase 2A regulatory subunit B'	gi|971581268|ref|XP_006364455.2|//PREDICTED: probable polyamine transporter At1g31830 isoform X1 [Solanum tuberosum];gi|460400836|ref|XP_004245938.1|//PREDICTED: probable polyamine transporter At1g31830 isoform X1 [Solanum lycopersicum]
Solyc04g015040.3.1	960	1930.28829937796	501.189614213555	-1.9453879140115	2.53397172882301e-10	Down	1.62930566282231e-11	NA	NA	NA	K01802//peptidylprolyl isomerase [EC:5.2.1.8]	gi|460381848|ref|XP_004236653.1|//PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP16-3, chloroplastic [Solanum lycopersicum]
BGI_novel_G000191	950	147.529560201652	8.23454298090529	-4.16317166086535	1.2213221826758e-05	Down	1.76178501824785e-06	NA	NA	NA	K05747//Wiskott-Aldrich syndrome protein	gi|970021220|ref|XP_015071868.1|//PREDICTED: extensin-3 isoform X2 [Solanum pennellii]
Solyc12g008840.2.1	2727	213.345691297142	102.159853344346	-1.06236461525209	0.0056681037415543	Down	0.00154210113350249	NA	NA	NA	K12309//beta-galactosidase [EC:3.2.1.23]	gi|698530974|ref|XP_009762312.1|//PREDICTED: beta-galactosidase-like [Nicotiana sylvestris];gi|927028837|ref|NP_001234842.2|//ss-galactosidase precursor [Solanum lycopersicum]
Solyc02g072190.3.1	1461	41.3014465437196	510.661967361422	3.62810439860464	2.21258687812834e-24	Up	2.66387938584857e-26	NA	GO:0043565//sequence-specific DNA binding;GO:0003700//transcription factor activity, sequence-specific DNA binding	GO:0006355//regulation of transcription, DNA-templated	K13425//WRKY transcription factor 22	gi|460374527|ref|XP_004233062.1|//PREDICTED: probable WRKY transcription factor 65 isoform X1 [Solanum lycopersicum];gi|723675240|ref|XP_010316839.1|//PREDICTED: probable WRKY transcription factor 65 isoform X2 [Solanum lycopersicum]
Solyc02g068365.1.1	463	0.451041561982087	19.4588875585642	5.43102504593025	0.000147376889892716	Up	2.6857224343428e-05	NA	NA	NA	K13511//monolysocardiolipin acyltransferase [EC:2.3.1.-]	gi|460374954|ref|XP_004233273.1|//PREDICTED: N-acylphosphatidylethanolamine synthase isoform X2 [Solanum lycopersicum]
Solyc11g069400.2.1	2245	1068.44257951712	2390.47933694674	1.1617905587968	0.000272833747751841	Up	5.28317921414498e-05	GO:0043231//intracellular membrane-bounded organelle	GO:0015036//disulfide oxidoreductase activity;GO:0004576//oligosaccharyl transferase activity	GO:0019725//cellular homeostasis;GO:0018904//ether metabolic process	K09580//protein disulfide-isomerase A1 [EC:5.3.4.1]	gi|460411467|ref|XP_004251132.1|//PREDICTED: protein disulfide isomerase-like 1-4 [Solanum lycopersicum]
Solyc02g082680.3.1	3128	653.918238164764	315.552543158352	-1.05123001079246	0.0348072495260527	Down	0.0122269091819562	NA	NA	NA	NA	gi|460373523|ref|XP_004232568.1|//PREDICTED: uncharacterized protein LOC101258217 [Solanum lycopersicum]
Solyc10g044520.2.1	1166	51112.6771503884	1937.77114107097	-4.7212110603986	2.73818946898466e-34	Down	1.38807875272817e-36	GO:0009536//plastid;GO:0009507//chloroplast	GO:0009055//electron carrier activity;GO:0043169//cation binding;GO:0051537//2 iron, 2 sulfur cluster binding;GO:0046872//metal ion binding;GO:0051536//iron-sulfur cluster binding	GO:0022900//electron transport chain;GO:0006091//generation of precursor metabolites and energy;GO:0051234//establishment of localization	K02639//ferredoxin	gi|350537877|ref|NP_001234059.1|//ferredoxin-1, chloroplastic [Solanum lycopersicum]
Solyc07g055217.1.1	3318	156.660129290079	58.8493757417611	-1.41253903738793	0.00308093580416969	Down	0.000775746285864255	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial;K17710//pentatricopeptide repeat domain-containing protein 1	gi|698488761|ref|XP_009790968.1|//PREDICTED: putative pentatricopeptide repeat-containing protein At4g17915 [Nicotiana sylvestris]
Solyc09g089780.3.1	2092	27.3680889049104	693.17550119422	4.66265406551166	7.71820891230551e-09	Up	6.26306128003918e-10	NA	NA	NA	K06892//feruloyl-CoA ortho-hydroxylase [EC:1.14.11.-];K13229//2,4-dihydroxy-1,4-benzoxazin-3-one-glucoside dioxygenase [EC:1.14.20.2]	gi|460404473|ref|XP_004247707.1|//PREDICTED: deacetoxyvindoline 4-hydroxylase-like [Solanum lycopersicum]
Solyc02g068270.3.1	658	697.041885365692	168.560672254914	-2.04797737744304	2.28106282744816e-06	Down	2.86365722485664e-07	NA	NA	NA	NA	gi|723676599|ref|XP_010317056.1|//PREDICTED: uncharacterized protein LOC101244833 [Solanum lycopersicum]
Solyc07g065070.1.1	1053	7.94565126060078	1.06919331715512	-2.89364274870888	0.0487041492993002	Down	0.0181324378709337	NA	NA	NA	NA	gi|723719090|ref|XP_004244342.2|//PREDICTED: probable long-chain-alcohol O-fatty-acyltransferase 5 [Solanum lycopersicum]
Solyc02g082830.2.1	993	549.594932498657	1823.83549709092	1.73053500279489	0.000631006994568733	Up	0.000133525671245218	NA	NA	NA	K00831//phosphoserine aminotransferase [EC:2.6.1.52]	gi|460373499|ref|XP_004232556.1|//PREDICTED: phosphoserine aminotransferase 2, chloroplastic-like [Solanum lycopersicum]
Solyc12g015730.2.1	2557	458.344083712203	100.290008403423	-2.19225316968133	7.84615380037747e-07	Down	8.96686579393072e-08	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial	gi|460413503|ref|XP_004252127.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g55840 [Solanum lycopersicum]
Solyc01g091010.3.1	1216	10.8171407370695	130.65198131276	3.59433789168322	0.0129376318795205	Up	0.00390762006559396	NA	GO:0003676//nucleic acid binding	NA	NA	gi|460367870|ref|XP_004229793.1|//PREDICTED: axial regulator YABBY 1 [Solanum lycopersicum]
Solyc05g053200.2.1	3881	114.916843487967	46.9247514302179	-1.29216926293382	0.00463452451476725	Down	0.00122790369207416	NA	NA	NA	K17604//zinc finger SWIM domain-containing protein 3	gi|723701843|ref|XP_010321421.1|//PREDICTED: uncharacterized protein LOC101244189 [Solanum lycopersicum]
Solyc03g097500.3.1	1778	67.6789559654587	7.59545157691889	-3.15549966741175	0.00336234917189106	Down	0.000855250885231274	NA	GO:0016747//transferase activity, transferring acyl groups other than amino-acyl groups	NA	K15400//omega-hydroxypalmitate O-feruloyl transferase [EC:2.3.1.188]	gi|460379126|ref|XP_004235315.1|//PREDICTED: omega-hydroxypalmitate O-feruloyl transferase [Solanum lycopersicum]
Solyc09g015000.3.1	471	353.162875691745	39.9920796211207	-3.14254748601857	5.01069765694974e-06	Down	6.71255679852295e-07	NA	NA	GO:0050896//response to stimulus	K13993//HSP20 family protein	gi|460401599|ref|XP_004246306.1|//PREDICTED: 18.2 kDa class I heat shock protein-like [Solanum lycopersicum]
Solyc06g063210.3.1	3129	427.958082819112	1625.26836725679	1.92513655712234	0.0253221461923457	Up	0.00847878482353665	NA	NA	NA	K05387//glutamate receptor, ionotropic, plant	gi|723709990|ref|XP_010322804.1|//PREDICTED: glutamate receptor 2.8-like [Solanum lycopersicum]
Solyc09g011520.3.1	1229	60.4894648622463	269.627707153508	2.1562129539729	0.00277496628013944	Up	0.000689707587444825	NA	GO:0016765//transferase activity, transferring alkyl or aryl (other than methyl) groups;GO:0016740//transferase activity	GO:0009755//hormone-mediated signaling pathway	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|460401764|ref|XP_004246386.1|//PREDICTED: probable glutathione S-transferase [Solanum lycopersicum];gi|723727223|ref|XP_010325822.1|//PREDICTED: LOW QUALITY PROTEIN: probable glutathione S-transferase [Solanum lycopersicum]
Solyc06g005520.3.1	2241	140.9344174847	1474.20175258554	3.38683809944096	2.15302135390299e-26	Up	2.13472372200013e-28	NA	NA	NA	K00924;K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460389444|ref|XP_004240362.1|//PREDICTED: probable receptor-like protein kinase At5g47070 isoform X1 [Solanum lycopersicum];gi|723703644|ref|XP_010321720.1|//PREDICTED: probable receptor-like protein kinase At5g47070 isoform X2 [Solanum lycopersicum]
Solyc01g008480.3.1	3149	371.761820711992	173.805807526164	-1.09690232661567	0.000279290898659417	Down	5.4248727930305e-05	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial;K17710//pentatricopeptide repeat domain-containing protein 1;K12275//translocation protein SEC62	gi|723655298|ref|XP_010315134.1|//PREDICTED: pentatricopeptide repeat-containing protein At2g01390-like [Solanum lycopersicum]
Solyc03g120670.3.1	1367	3353.28795274409	707.69619070485	-2.24437431633543	5.16771207286585e-13	Down	2.1959116456937e-14	NA	NA	NA	K18606//hydroxyphenylpyruvate reductase [EC:1.1.1.237];K15919//hydroxypyruvate reductase 2	gi|460379844|ref|XP_004235670.1|//PREDICTED: hydroxyphenylpyruvate reductase-like isoform X2 [Solanum lycopersicum];gi|723685216|ref|XP_010318542.1|//PREDICTED: hydroxyphenylpyruvate reductase-like isoform X1 [Solanum lycopersicum]
Solyc05g023760.3.1	2106	336.421555887304	70.7860366868701	-2.24873344160139	2.42412556311731e-08	Down	2.10986029144138e-09	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K12489//Arf-GAP with coiled-coil, ANK repeat and PH domain-containing protein	gi|723700024|ref|XP_010321101.1|//PREDICTED: inactive leucine-rich repeat receptor-like protein kinase CORYNE isoform X1 [Solanum lycopersicum]
Solyc11g071800.2.1	1417	733.091036807527	89.2446157216606	-3.03815532977695	1.64205229602144e-10	Down	1.02704776827343e-11	NA	GO:0016843//amine-lyase activity	GO:0008152//metabolic process	K01757//strictosidine synthase [EC:4.3.3.2]	gi|460411641|ref|XP_004251214.1|//PREDICTED: strictosidine synthase 3 [Solanum lycopersicum]
Solyc02g084810.3.1	1790	268.548450827177	106.042932718217	-1.34053392408288	0.000265349667428751	Down	5.12737690454243e-05	GO:0016021//integral component of membrane	NA	NA	NA	gi|297735082|emb|CBI17444.3|//unnamed protein product [Vitis vinifera];gi|460373260|ref|XP_004232439.1|//PREDICTED: uncharacterized protein LOC101268823 [Solanum lycopersicum];gi|970004843|ref|XP_015063242.1|//PREDICTED: uncharacterized protein LOC107008639 [Solanum pennellii]
Solyc04g072740.3.1	2384	889.733832867397	77.9388030752728	-3.51296013214079	1.24792572453688e-21	Down	1.96761809109549e-23	GO:0016020//membrane	GO:0005215//transporter activity	GO:0006810//transport	K17469//sulfate transporter 2, low-affinity	gi|460384363|ref|XP_004237881.1|//PREDICTED: low affinity sulfate transporter 3-like isoform X1 [Solanum lycopersicum]
Solyc01g107415.1.1	6975	360.56863098803	74.4380994606239	-2.27616076323239	5.22356969538021e-09	Down	4.12776493000076e-10	NA	GO:0005488//binding	NA	K17607//type 2A phosphatase activator TIP41	gi|723665087|ref|XP_010315203.1|//PREDICTED: zinc finger protein 4-like [Solanum lycopersicum]
Solyc09g075300.3.1	1253	215.32341747738	727.925811200234	1.75728619301347	6.0201833110098e-12	Up	3.00695006588383e-13	NA	NA	NA	K08726//soluble epoxide hydrolase / lipid-phosphate phosphatase [EC:3.3.2.10 3.1.3.76];K10144//RING finger and CHY zinc finger domain-containing protein 1 [EC:2.3.2.27]	gi|460403856|ref|XP_004247402.1|//PREDICTED: bifunctional epoxide hydrolase 2 [Solanum lycopersicum]
Solyc09g090870.3.1	3984	631.17290415842	255.67943312466	-1.30369915798739	0.00509869638981105	Down	0.00136418826174384	NA	NA	NA	K08737//DNA mismatch repair protein MSH6	gi|460404638|ref|XP_004247788.1|//PREDICTED: DNA mismatch repair protein MSH1, mitochondrial isoform X1 [Solanum lycopersicum];gi|971539228|ref|XP_015160814.1|//PREDICTED: DNA mismatch repair protein MSH1, mitochondrial isoform X1 [Solanum tuberosum];gi|61696673|gb|AAX53097.1|//DNA mismatch repair protein [Solanum lycopersicum];gi|723732681|ref|XP_010326799.1|//PREDICTED: DNA mismatch repair protein MSH1, mitochondrial isoform X2 [Solanum lycopersicum]
Solyc02g086820.3.1	1675	148827.571652948	1471.8373064785	-6.65987980527249	5.13838860016322e-68	Down	2.10683892208869e-71	GO:0009532//plastid stroma	GO:0016836//hydro-lyase activity;GO:0046914//transition metal ion binding;GO:0004089//carbonate dehydratase activity;GO:0008270//zinc ion binding	GO:0015976//carbon utilization	K01673//carbonic anhydrase [EC:4.2.1.1]	gi|921274045|ref|NP_001299833.1|//carbonic anhydrase isoform 2 [Solanum lycopersicum]
Solyc02g066930.3.1	2045	923.455133593122	297.738883344668	-1.63299422574823	0.0152568186677211	Down	0.00471793638189424	NA	GO:0005488//binding	NA	K12741//heterogeneous nuclear ribonucleoprotein A1/A3	gi|460375180|ref|XP_004233385.1|//PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial [Solanum lycopersicum]
Solyc07g006520.3.1	1941	6647.17646401315	1602.60670196358	-2.05232123889116	1.44380195426932e-15	Down	4.33764863255209e-17	NA	NA	NA	K10956//protein transport protein SEC61 subunit alpha	gi|460394140|ref|XP_004242663.1|//PREDICTED: preprotein translocase subunit SCY1, chloroplastic [Solanum lycopersicum]
Solyc06g067890.3.1	3023	394.970893545439	880.213042296503	1.15610640742186	0.0120594861196136	Up	0.00360552922936562	NA	NA	NA	NA	gi|460392218|ref|XP_004241714.1|//PREDICTED: uncharacterized protein LOC101268405 [Solanum lycopersicum]
Solyc07g040660.3.1	924	114.790911179759	35.159248704167	-1.70703227013356	0.0146700714991822	Down	0.00451016660672635	NA	NA	NA	NA	gi|723717140|ref|XP_010324050.1|//PREDICTED: uncharacterized protein LOC101266350 isoform X1 [Solanum lycopersicum]
Solyc07g063710.2.1	2534	13.5486879076945	111.951861622456	3.04665346975332	0.000201582208835687	Up	3.7960254535814e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723719115|ref|XP_010324437.1|//PREDICTED: uncharacterized protein LOC101244973 [Solanum lycopersicum]
Solyc11g006170.2.1	1593	208.382430942269	82.8558260637886	-1.33055859659618	0.0198491338600878	Down	0.00637986735036295	NA	NA	NA	K14509//ethylene receptor [EC:2.7.13.-];K09510//DnaJ homolog subfamily B member 4;K09511	gi|460410078|ref|XP_004250458.1|//PREDICTED: uncharacterized protein LOC101266383 [Solanum lycopersicum]
Solyc07g005020.3.1	2598	446.943577103525	134.948628965833	-1.72768239512838	0.0239820957087166	Down	0.00795410345967497	NA	NA	NA	K02209//DNA replication licensing factor MCM5 [EC:3.6.4.12]	gi|460393923|ref|XP_004242557.1|//PREDICTED: DNA replication licensing factor MCM5 [Solanum lycopersicum]
Solyc01g095620.3.1	1431	2132.60429429721	20578.4217581896	3.27044413749964	1.13210169684116e-16	Up	3.0214135043174e-18	NA	GO:0035251//UDP-glucosyltransferase activity	NA	K08237//hydroquinone glucosyltransferase [EC:2.4.1.218]	gi|994306780|ref|NP_001307116.1|//hydroquinone glucosyltransferase [Solanum lycopersicum]
Solyc12g007200.2.1	1685	486.164132575597	1399.89374994085	1.52580196710191	0.00194680630588261	Up	0.000463988352460616	NA	GO:0004674//protein serine/threonine kinase activity;GO:0000166//nucleotide binding	GO:0009987//cellular process	K08817//cell cycle related kinase [EC:2.7.11.22]	gi|460412457|ref|XP_004251615.1|//PREDICTED: cyclin-dependent kinase F-1 [Solanum lycopersicum]
Solyc09g005290.1.1	2811	95.9339409275076	277.545812446402	1.53261269753715	0.000756123445797651	Up	0.000163101475355263	NA	NA	NA	K15078//structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]	gi|460402880|ref|XP_004246938.1|//PREDICTED: putative disease resistance protein RGA3 [Solanum lycopersicum]
Solyc06g005680.3.1	2319	7.50396390291348	246.355315420479	5.03694390176344	1.01183678244893e-27	Up	8.63689515360086e-30	NA	NA	NA	K14491//two-component response regulator ARR-B family	gi|460389464|ref|XP_004240372.1|//PREDICTED: transcription factor PCL1 [Solanum lycopersicum]
Solyc04g071340.4.1	1871	6860.01775189258	406.471027705059	-4.07698788053002	2.83235694799952e-38	Down	1.01351672509301e-40	GO:0044424//intracellular part;GO:0005737//cytoplasm	GO:0043169//cation binding;GO:0046872//metal ion binding;GO:0019203//carbohydrate phosphatase activity;GO:0042132//fructose 1,6-bisphosphate 1-phosphatase activity	GO:0005975//carbohydrate metabolic process;GO:0016311//dephosphorylation	K03841//fructose-1,6-bisphosphatase I [EC:3.1.3.11]	gi|460384171|ref|XP_004237787.1|//PREDICTED: fructose-1,6-bisphosphatase, cytosolic [Solanum lycopersicum];gi|970024774|ref|XP_015073694.1|//PREDICTED: fructose-1,6-bisphosphatase, cytosolic [Solanum pennellii]
Solyc08g021960.3.1	1785	230.979720315157	569.711720606067	1.30246589622679	1.85380625652607e-05	Up	2.7879539270571e-06	GO:0044464//cell part	NA	NA	K15289//solute carrier family 35, member F5	gi|460398617|ref|XP_004244853.1|//PREDICTED: uncharacterized vacuolar membrane protein YML018C isoform X1 [Solanum lycopersicum]
Solyc02g065400.3.1	1886	47757.813254472	11818.4210760172	-2.01469947325302	6.0192534302996e-11	Down	3.5270114777214e-12	GO:0009535//chloroplast thylakoid membrane;GO:0009523//photosystem II;GO:0019898//extrinsic component of membrane;GO:0016021//integral component of membrane;GO:0009534//chloroplast thylakoid;GO:0009654//photosystem II oxygen evolving complex	GO:0046872//metal ion binding;GO:0005509//calcium ion binding	GO:0042549//photosystem II stabilization;GO:0042548//regulation of photosynthesis, light reaction	K02716//photosystem II oxygen-evolving enhancer protein 1	gi|823630968|ref|NP_001296294.1|//oxygen-evolving enhancer protein 1, chloroplastic [Solanum lycopersicum]
Solyc07g064110.3.1	4478	888.227818949	374.900142149476	-1.24442338401149	0.00334872864813164	Down	0.000851411887166615	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial;K17710//pentatricopeptide repeat domain-containing protein 1	gi|723718430|ref|XP_010324329.1|//PREDICTED: pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like isoform X1 [Solanum lycopersicum];gi|460397198|ref|XP_004244155.1|//PREDICTED: pentatricopeptide repeat-containing protein At4g04790, mitochondrial-like isoform X2 [Solanum lycopersicum]
Solyc12g097000.2.1	973	183.672175110399	590.771542390239	1.68546724675005	0.0158177497991438	Up	0.00491430388310212	NA	NA	NA	K03283//heat shock 70kDa protein 1/8;K08852//serine/threonine-protein kinase/endoribonuclease IRE1 [EC:2.7.11.1 3.1.26.-]	gi|970068067|ref|XP_015061155.1|//PREDICTED: TMV resistance protein N-like [Solanum pennellii]
Solyc05g014240.3.1	3348	1170.25501065247	520.200041705153	-1.16968452215903	0.00161017985527486	Down	0.000375703048395438	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K16224//senescence-induced receptor-like serine/threonine-protein kinase;K10737//DNA helicase MCM8 [EC:3.6.4.12]	gi|723699091|ref|XP_010320968.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g67720 isoform X2 [Solanum lycopersicum];gi|460386980|ref|XP_004239170.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g67720 isoform X1 [Solanum lycopersicum];gi|697103405|ref|XP_009605520.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g67720 isoform X1 [Nicotiana tomentosiformis]
Solyc02g083900.3.1	13385	3591.16026084419	1119.10386599417	-1.68210609525414	5.22375006399337e-05	Down	8.58682636879781e-06	NA	NA	NA	K08874//transformation/transcription domain-associated protein	gi|723672714|ref|XP_010316421.1|//PREDICTED: transformation/transcription domain-associated protein isoform X1 [Solanum lycopersicum];gi|460373358|ref|XP_004232487.1|//PREDICTED: transformation/transcription domain-associated protein isoform X2 [Solanum lycopersicum]
Solyc05g005160.3.1	1767	1422.613848757	6400.53874864154	2.16964923234881	1.36964885915832e-05	Up	1.99821292483438e-06	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004774//succinate-CoA ligase activity	NA	K01648//ATP citrate (pro-S)-lyase [EC:2.3.3.8]	gi|460385918|ref|XP_004238647.1|//PREDICTED: ATP-citrate synthase alpha chain protein 2 [Solanum lycopersicum]
Solyc05g052470.3.1	1639	370.443707449638	1109.03835593332	1.58198302911005	0.0468989113362302	Up	0.0173711973292127	GO:0009536//plastid	GO:0005506//iron ion binding;GO:0016491//oxidoreductase activity	GO:0000041//transition metal ion transport;GO:0006875//cellular metal ion homeostasis;GO:0008152//metabolic process	K00522//ferritin heavy chain [EC:1.16.3.2]	gi|460388594|ref|XP_004239952.1|//PREDICTED: ferritin-2, chloroplastic [Solanum lycopersicum]
Solyc06g073660.3.1	2197	112.020807048465	26.9682779648549	-2.05443141962937	0.00900474340997851	Down	0.00259555989225301	NA	NA	NA	NA	gi|460391537|ref|XP_004241377.1|//PREDICTED: xylogen-like protein 11 [Solanum lycopersicum]
Solyc02g021600.1.1	1787	309.156323892669	639.012397506997	1.04750740453813	0.0144401615761159	Up	0.00443085394534241	NA	NA	NA	K10457//kelch-like protein 20	gi|697095116|ref|XP_009609743.1|//PREDICTED: F-box/kelch-repeat protein At1g30090 [Nicotiana tomentosiformis];gi|460371453|ref|XP_004231551.1|//PREDICTED: F-box/kelch-repeat protein At1g30090 [Solanum lycopersicum]
Solyc08g066210.3.1	3786	50.5181454579169	1976.33122152538	5.28987926602694	1.2898131911569e-28	Up	1.01923511452685e-30	GO:0016020//membrane	GO:0004674//protein serine/threonine kinase activity;GO:0000166//nucleotide binding;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K00924	gi|460399227|ref|XP_004245143.1|//PREDICTED: receptor-like protein kinase HSL1 [Solanum lycopersicum]
Solyc08g078670.2.1	1741	4597.03568285392	716.948987114598	-2.68076148861973	1.922536587645e-09	Down	1.42391538677897e-10	NA	NA	NA	K00924;K02882//large subunit ribosomal protein L18Ae;K01381//saccharopepsin [EC:3.4.23.25]	gi|460400483|ref|XP_004245764.1|//PREDICTED: aspartic proteinase nepenthesin-1 [Solanum lycopersicum]
Solyc09g082570.3.1	1186	273.511235679352	1494.56093030224	2.45004970964268	5.20502020480591e-11	Up	3.00736620004021e-12	NA	NA	NA	K06630//14-3-3 protein epsilon	gi|460404245|ref|XP_004247594.1|//PREDICTED: uncharacterized protein LOC101254238 [Solanum lycopersicum]
Solyc09g010450.1.1	3771	983.376854793175	111.028418390333	-3.14681540932918	3.70828275148332e-09	Down	2.87368415101156e-10	GO:0009507//chloroplast	NA	GO:0009793//embryo development ending in seed dormancy	K17964//leucine-rich PPR motif-containing protein, mitochondrial	gi|460401914|ref|XP_004246460.1|//PREDICTED: pentatricopeptide repeat-containing protein At3g53700, chloroplastic [Solanum lycopersicum]
Solyc01g098320.3.1	1089	72.3499600047199	170.813418601672	1.23935718896185	0.017836352103654	Up	0.00564187272224855	NA	NA	NA	K03013//DNA-directed RNA polymerases I, II, and III subunit RPABC1	gi|460368593|ref|XP_004230150.1|//PREDICTED: DNA-directed RNA polymerase V subunit 5A-like [Solanum lycopersicum]
Solyc05g055380.2.1	904	213.062658979404	485.442384455276	1.18802230627012	0.0242475607285726	Up	0.00805751468224334	NA	NA	NA	K09140//pre-rRNA-processing protein TSR3	gi|460388121|ref|XP_004239718.1|//PREDICTED: ribosome biogenesis protein TSR3 homolog [Solanum lycopersicum]
Solyc07g062130.3.1	2980	3224.66130190979	9545.66252346283	1.56569769547147	0.00272412730542275	Up	0.000675853263191212	NA	NA	NA	K12450//UDP-glucose 4,6-dehydratase [EC:4.2.1.76]	gi|460397482|ref|XP_004244296.1|//PREDICTED: probable rhamnose biosynthetic enzyme 1 [Solanum lycopersicum]
Solyc04g079440.3.1	1622	1052.91186298935	5863.10437827871	2.47728006414367	2.54382152411212e-11	Up	1.40712358050633e-12	GO:0005615//extracellular space	GO:0003824//catalytic activity;GO:0004866//endopeptidase inhibitor activity	NA	K13963//serpin B	gi|460385000|ref|XP_004238194.1|//PREDICTED: serpin-ZX-like isoform X1 [Solanum lycopersicum]
Solyc11g022470.2.1	1543	371.169198116617	1583.40728008681	2.09288349272871	3.6268298436461e-10	Up	2.40364673550126e-11	GO:0043231//intracellular membrane-bounded organelle;GO:0005634//nucleus	GO:0003677//DNA binding;GO:0003676//nucleic acid binding	GO:0006355//regulation of transcription, DNA-templated	K12741//heterogeneous nuclear ribonucleoprotein A1/A3;K06236//collagen, type I, alpha;K14491//two-component response regulator ARR-B family;K01940//argininosuccinate synthase [EC:6.3.4.5];K14317//nuclear pore complex protein Nup214	gi|970064193|ref|XP_015059049.1|//PREDICTED: myb family transcription factor APL-like isoform X1 [Solanum pennellii]
Solyc08g014290.1.1	1188	311.566198821036	958.915278774024	1.6218646303126	0.00604772216375535	Up	0.00165913355916354	NA	NA	NA	K02883//large subunit ribosomal protein L18e	gi|460398426|ref|XP_004244760.1|//PREDICTED: uncharacterized protein At1g18480 [Solanum lycopersicum]
Solyc01g102670.3.1	4323	297.941748957933	728.163994458991	1.28923311080552	0.00519287120041869	Up	0.00139267587173895	NA	NA	NA	K01800//maleylacetoacetate isomerase [EC:5.2.1.2]	gi|460369069|ref|XP_004230386.1|//PREDICTED: uncharacterized protein LOC101247758 [Solanum lycopersicum]
Solyc11g017380.2.1	2007	63.5295755729585	212.119809238682	1.73937907020571	5.19130761840326e-06	Up	6.97192535750221e-07	NA	NA	NA	NA	gi|460409911|ref|XP_004250380.1|//PREDICTED: probable magnesium transporter NIPA4 isoform X1 [Solanum lycopersicum]
Solyc10g054320.2.1	3494	331.952269163644	1760.50993742186	2.40694565169938	8.72425494490276e-18	Up	2.04871053201459e-19	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460406474|ref|XP_004248689.1|//PREDICTED: protein FMP32, mitochondrial-like [Solanum lycopersicum]
Solyc03g111680.3.1	4264	160.996943150922	28.0593246033405	-2.52048110777755	0.00719271566105793	Down	0.0020199015875358	NA	GO:0003824//catalytic activity	NA	K10755//replication factor C subunit 2/4	gi|723688099|ref|XP_010319038.1|//PREDICTED: protein STICHEL-like 2 [Solanum lycopersicum]
Solyc09g090810.2.1	3630	551.683273582868	251.432631849142	-1.13366834007757	0.00055095863434527	Down	0.00011480016274005	GO:0005634//nucleus;GO:0005694//chromosome	GO:0042393//histone binding;GO:0008270//zinc ion binding;GO:0018024//histone-lysine N-methyltransferase activity	GO:0034968//histone lysine methylation	K11420//euchromatic histone-lysine N-methyltransferase [EC:2.1.1.43]	gi|460404624|ref|XP_004247781.1|//PREDICTED: histone-lysine N-methyltransferase family member SUVH9-like [Solanum lycopersicum]
Solyc05g012210.3.1	3446	440.238536379974	997.980254889158	1.180725834626	0.0179804918154794	Up	0.00569145432000338	NA	NA	NA	K05747//Wiskott-Aldrich syndrome protein	gi|723698495|ref|XP_010320856.1|//PREDICTED: ninja-family protein AFP3 [Solanum lycopersicum]
Solyc11g005640.2.1	3776	1095.46429988677	5387.10068898601	2.29796656142063	0.0100165468668839	Up	0.00292939565817694	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460408910|ref|XP_004249884.1|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Solanum lycopersicum]
Solyc12g038820.1.1	1022	478.715241487524	206.658536690438	-1.21191877970409	3.12874924298777e-05	Down	4.9308005812406e-06	NA	GO:0003824//catalytic activity	NA	NA	gi|460413777|ref|XP_004252255.1|//PREDICTED: uncharacterized protein LOC101266398 [Solanum lycopersicum]
Solyc11g008900.2.1	2167	3327.43892381652	1037.07811183118	-1.68188762446808	8.15675704378457e-12	Down	4.13492976723834e-13	NA	GO:0046914//transition metal ion binding	NA	K03260//translation initiation factor 4G	gi|460409335|ref|XP_004250094.1|//PREDICTED: zinc finger CCCH domain-containing protein ZFN-like [Solanum lycopersicum]
Solyc02g093270.3.1	2087	1237.61163134543	6654.01262125115	2.42666594198241	2.2590366749234e-05	Up	3.46248650935031e-06	NA	GO:0043169//cation binding;GO:0008171//O-methyltransferase activity	GO:0009699//phenylpropanoid biosynthetic process;GO:0006730//one-carbon metabolic process	K00588//caffeoyl-CoA O-methyltransferase [EC:2.1.1.104]	gi|992319616|ref|NP_001307032.1|//caffeoyl-CoA O-methyltransferase-like [Solanum lycopersicum]
Solyc04g071960.3.1	1417	170.320659986303	14.0170663897931	-3.60299709867111	0.00896270377684479	Down	0.0025817718349283	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K09841//xanthoxin dehydrogenase [EC:1.1.1.288]	gi|460384257|ref|XP_004237829.1|//PREDICTED: xanthoxin dehydrogenase-like [Solanum lycopersicum]
Solyc04g077150.3.1	1348	990.718213407215	235.246532102309	-2.07430131938619	0.000774964138531217	Down	0.000167656622187087	GO:0031224//intrinsic component of membrane	NA	NA	NA	gi|460384709|ref|XP_004238052.1|//PREDICTED: ergosterol biosynthetic protein 28 [Solanum lycopersicum]
Solyc06g065190.1.1	978	300.072849642064	97.4215306111558	-1.62300023594741	0.00582476597451827	Down	0.0015912371338618	NA	NA	NA	K16221//transcription factor TCP21 (protein CCA1 HIKING EXPEDITION)	gi|350539617|ref|NP_001233966.1|//TCP transcription factor 13 [Solanum lycopersicum]
Solyc01g007900.3.1	1840	254.456197073854	514.458979634356	1.01563872106712	0.000909462732425153	Up	0.000200381475002426	NA	NA	NA	NA	gi|723655448|ref|XP_010315372.1|//PREDICTED: tobamovirus multiplication protein 3 [Solanum lycopersicum]
Solyc12g100270.2.1	2168	18.1006968292229	1280.54295959059	6.14456660464005	4.21377605589842e-32	Up	2.56018151599613e-34	NA	NA	NA	K15404//aldehyde decarbonylase [EC:4.1.99.5]	gi|460414993|ref|XP_004252845.1|//PREDICTED: protein ECERIFERUM 1 [Solanum lycopersicum]
Solyc06g054690.3.1	2407	601.154251497703	2072.55274570312	1.78560169038628	8.7682006864713e-07	Up	1.01448095015681e-07	NA	NA	NA	K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6];K01530//phospholipid-translocating ATPase [EC:3.6.3.1];K11323//histone arginine demethylase JMJD6 [EC:1.14.11.-]	gi|460390935|ref|XP_004241080.1|//PREDICTED: sialidase [Solanum lycopersicum]
Solyc06g076260.3.1	1057	327.6552590408	1167.56052158304	1.8332467422618	6.9060130642369e-11	Up	4.08265123001332e-12	NA	NA	NA	NA	gi|460391224|ref|XP_004241223.1|//PREDICTED: uncharacterized protein C20orf24 homolog [Solanum lycopersicum]
Solyc08g063090.2.1	1651	372.390712466415	54.7627046055746	-2.76555148720931	0.00037739551333665	Down	7.5344057306959e-05	NA	GO:0016705//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen;GO:0005506//iron ion binding	GO:0006631//fatty acid metabolic process	K13076//Delta8-fatty-acid desaturase [EC:1.14.19.4]	gi|460399127|ref|XP_004245093.1|//PREDICTED: delta(8)-fatty-acid desaturase 2-like [Solanum lycopersicum]
Solyc04g054800.3.1	1234	52.8882787600258	14.3683927019678	-1.88004933790909	0.0199888372543671	Down	0.00642910054385263	NA	NA	NA	NA	gi|723692112|ref|XP_004237416.2|//PREDICTED: protein UPSTREAM OF FLC isoform X1 [Solanum lycopersicum]
Solyc04g072700.3.1	1394	84.8489929627983	6.17892006787967	-3.77947092153042	0.000101580817632778	Down	1.77429443651111e-05	NA	NA	NA	K07213//copper chaperone;K10752//histone-binding protein RBBP4	gi|460385647|ref|XP_004238514.1|//PREDICTED: heavy metal-associated isoprenylated plant protein 26 isoform X1 [Solanum lycopersicum];gi|723694190|ref|XP_010320148.1|//PREDICTED: heavy metal-associated isoprenylated plant protein 26 isoform X2 [Solanum lycopersicum]
Solyc03g026280.3.1	897	865.180491328413	8532.86063050239	3.3019564443625	1.33867484923729e-05	Up	1.94753538712284e-06	GO:0043231//intracellular membrane-bounded organelle	GO:0001071//nucleic acid binding transcription factor activity;GO:0003676//nucleic acid binding	GO:0006351//transcription, DNA-templated	K09286//EREBP-like factor	gi|350539177|ref|NP_001234123.1|//CBF1 protein [Solanum lycopersicum]
Solyc12g042360.2.1	1871	514.085895352917	1126.35589843313	1.13158141718053	0.00210990714590869	Up	0.00050679296437437	GO:0043231//intracellular membrane-bounded organelle	GO:0015020//glucuronosyltransferase activity	GO:0010413//glucuronoxylan metabolic process;GO:0009832//plant-type cell wall biogenesis	K02366//glucuronyl/N-acetylglucosaminyl transferase EXT1 [EC:2.4.1.224 2.4.1.225];K18789//xylogalacturonan beta-1,3-xylosyltransferase [EC:2.4.2.41];K20870	gi|723750693|ref|XP_010314238.1|//PREDICTED: probable beta-1,4-xylosyltransferase IRX10L [Solanum lycopersicum];gi|970069318|ref|XP_015061793.1|//PREDICTED: probable beta-1,4-xylosyltransferase IRX10L [Solanum pennellii]
Solyc02g068895.1.1	2302	132.151071283362	58.5632489381959	-1.17412062228253	0.00584948403991787	Down	0.00159842580500365	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial	gi|460376226|ref|XP_004233900.1|//PREDICTED: pentatricopeptide repeat-containing protein At4g19890 [Solanum lycopersicum]
Solyc10g079260.2.1	2391	521.001639768152	1335.44470814641	1.35796042656319	0.000257837661877111	Up	4.96588340136809e-05	GO:0044464//cell part;GO:0016021//integral component of membrane	NA	NA	NA	gi|995970187|ref|NP_001307153.1|//uncharacterized protein [Solanum lycopersicum]
Solyc06g073245.1.1	648	31.1474872623816	93.4572818795706	1.58519129583316	0.00010417136976996	Up	1.82614414801e-05	NA	GO:0046872//metal ion binding	NA	K13448//calcium-binding protein CML	gi|460391609|ref|XP_004241413.1|//PREDICTED: calmodulin-like protein 3 [Solanum lycopersicum]
Solyc06g083210.3.1	2384	460.464989870814	945.123169075454	1.03741088523158	0.00782573667482362	Up	0.00221867277280112	NA	GO:0004674//protein serine/threonine kinase activity;GO:0032559//adenyl ribonucleotide binding	GO:0006464//cellular protein modification process	K08829//male germ cell-associated kinase [EC:2.7.11.22]	gi|460393654|ref|XP_004242424.1|//PREDICTED: serine/threonine-protein kinase MHK [Solanum lycopersicum]
Solyc03g098440.3.1	1091	1148.64007181897	284.387775072768	-2.01399544350258	8.53973208561709e-06	Down	1.2032274967807e-06	NA	NA	NA	K09553//stress-induced-phosphoprotein 1	gi|460379289|ref|XP_004235396.1|//PREDICTED: uncharacterized protein LOC101257642 [Solanum lycopersicum]
Solyc09g092420.2.1	3089	53.1898461331773	173.142546787319	1.70273751696377	0.0127353673335034	Up	0.0038356108563705	GO:0031224//intrinsic component of membrane	GO:0005275//amine transmembrane transporter activity	GO:0006865//amino acid transport	K03294//basic amino acid/polyamine antiporter, APA family;K11584//serine/threonine-protein phosphatase 2A regulatory subunit B'	gi|723733229|ref|XP_010326897.1|//PREDICTED: probable polyamine transporter At1g31830, partial [Solanum lycopersicum];gi|969997306|ref|XP_015067255.1|//PREDICTED: probable polyamine transporter At1g31830 [Solanum pennellii]
Solyc09g042260.3.1	2418	376.484469314556	1029.96433758696	1.45193212772025	1.42373971537401e-05	Up	2.08721048925227e-06	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460402966|ref|XP_004246978.1|//PREDICTED: probable serine/threonine-protein kinase NAK isoform X2 [Solanum lycopersicum]
Solyc05g042122.1.1	1476	18.8914450054479	2.16883641374972	-3.12273991182072	0.00659153592948682	Down	0.00182871633827234	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13457//disease resistance protein RPM1;K18195//rhamnogalacturonan endolyase [EC:4.2.2.23]	gi|971588389|ref|XP_015161392.1|//PREDICTED: uncharacterized protein LOC107059390 [Solanum tuberosum]
Solyc08g068790.2.1	642	29.7033372266371	730.823434571475	4.62082596135443	9.50267083323776e-25	Up	1.0909581842244e-26	NA	GO:0016407//acetyltransferase activity	NA	NA	gi|460399518|ref|XP_004245286.1|//PREDICTED: tyramine N-feruloyltransferase 4/11-like [Solanum lycopersicum]
Solyc05g053320.1.1	666	25.7137423751229	239.355924836405	3.21854601765049	5.8248251363242e-11	Up	3.40222938296557e-12	NA	GO:0016787//hydrolase activity;GO:0005488//binding	NA	K11108//RNA 3'-terminal phosphate cyclase-like protein;K03363//cell division cycle 20, cofactor of APC complex;K18789//xylogalacturonan beta-1,3-xylosyltransferase [EC:2.4.2.41];K05658//ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:3.6.3.44]	gi|590670967|ref|XP_007038204.1|//Transducin/WD40 repeat-like superfamily protein [Theobroma cacao]
Solyc00g057880.3.1	1754	86.0593413845565	26.4843641547744	-1.70019092696847	0.00183143034367336	Down	0.000433555021345963	NA	NA	NA	K19983//exocyst complex component 1	gi|697161779|ref|XP_009589681.1|//PREDICTED: exocyst complex component SEC3A-like [Nicotiana tomentosiformis]
Solyc06g005190.3.1	4297	1138.60517437138	2424.33133953102	1.09031932792841	0.0073957794335182	Up	0.00208437037039031	NA	NA	NA	K10643//CCR4-NOT transcription complex subunit 4 [EC:2.3.2.27]	gi|723703571|ref|XP_010321710.1|//PREDICTED: uncharacterized protein LOC101247127 isoform X6 [Solanum lycopersicum];gi|460389400|ref|XP_004240343.1|//PREDICTED: uncharacterized protein LOC101247127 isoform X2 [Solanum lycopersicum];gi|723703565|ref|XP_010321708.1|//PREDICTED: uncharacterized protein LOC101247127 isoform X4 [Solanum lycopersicum]
Solyc06g068570.3.1	1445	26.7192873823561	242.404911921462	3.18146549686606	4.97356452060727e-10	Up	3.36292158952646e-11	NA	NA	NA	K09285//AP2-like factor, ANT lineage	gi|460392132|ref|XP_004241671.1|//PREDICTED: AP2-like ethylene-responsive transcription factor At1g16060 [Solanum lycopersicum]
Solyc05g008400.3.1	1392	364.058227609906	731.11416630677	1.00592749211699	0.00435471820411572	Up	0.00114532919517819	GO:0043231//intracellular membrane-bounded organelle;GO:0005634//nucleus	NA	GO:0016480//negative regulation of transcription from RNA polymerase III promoter;GO:0006359//regulation of transcription from RNA polymerase III promoter	K07953//GTP-binding protein SAR1 [EC:3.6.5.-]	gi|460386356|ref|XP_004238864.1|//PREDICTED: repressor of RNA polymerase III transcription MAF1 homolog [Solanum lycopersicum]
Solyc01g111160.3.1	900	46.9844880334193	2.16969158393468	-4.43662264149377	5.89914242267573e-05	Down	9.82457445374802e-06	NA	NA	NA	K01180//endo-1,3(4)-beta-glucanase [EC:3.2.1.6];K05747//Wiskott-Aldrich syndrome protein;K02184//formin 2;K01183//chitinase [EC:3.2.1.14]	gi|723666256|ref|XP_010315362.1|//PREDICTED: proline-rich protein 4-like isoform X2 [Solanum lycopersicum];gi|565387758|ref|XP_006359655.1|//PREDICTED: proline-rich protein 4 isoform X2 [Solanum tuberosum]
Solyc02g084020.3.1	2916	639.371373151263	294.066822580697	-1.12051012653545	0.0260142488325979	Down	0.00874155558468278	NA	NA	NA	K11088//small nuclear ribonucleoprotein D3	gi|460373342|ref|XP_004232479.1|//PREDICTED: small nuclear ribonucleoprotein Sm D3-like [Solanum lycopersicum]
Solyc09g092520.3.1	1265	1367.18227516127	120.898407504499	-3.49933845203665	6.75629607878834e-08	Down	6.40422727313208e-09	GO:0030312//external encapsulating structure;GO:0005576//extracellular region	GO:0016758//transferase activity, transferring hexosyl groups;GO:0016798//hydrolase activity, acting on glycosyl bonds	GO:0044042//glucan metabolic process	K08235//xyloglucan:xyloglucosyl transferase [EC:2.4.1.207]	gi|836469025|ref|NP_001296797.1|//brassinosteroid-regulated protein BRU1 precursor [Solanum lycopersicum]
Solyc03g005230.3.1	1610	21871.1331730686	6123.67558226957	-1.83655821087728	3.75684295026127e-16	Down	1.06286111497253e-17	GO:0016021//integral component of membrane	GO:0016741//transferase activity, transferring one-carbon groups;GO:0008168//methyltransferase activity	GO:0006730//one-carbon metabolic process;GO:0032259//methylation	K12502//MPBQ/MSBQ methyltransferase [EC:2.1.1.295]	gi|723678533|ref|XP_010317394.1|//PREDICTED: 2-methyl-6-phytyl-1,4-hydroquinone methyltransferase, chloroplastic-like [Solanum lycopersicum]
Solyc05g056060.3.1	1522	15.8479249673502	125.911633614222	2.99004572715479	1.00121142112332e-06	Up	1.17556879996215e-07	NA	NA	NA	NA	gi|970029622|ref|XP_015076137.1|//PREDICTED: uncharacterized protein LOC107020332 [Solanum pennellii]
Solyc01g100360.3.1	2446	1369.27559649465	475.632765898836	-1.52549284003729	0.000258287408122422	Down	4.97550814513447e-05	NA	NA	NA	K00382//dihydrolipoamide dehydrogenase [EC:1.8.1.4]	gi|970000873|ref|XP_015055489.1|//PREDICTED: dihydrolipoyl dehydrogenase 2, chloroplastic-like [Solanum pennellii];gi|460368885|ref|XP_004230295.1|//PREDICTED: dihydrolipoyl dehydrogenase 2, chloroplastic-like [Solanum lycopersicum]
Solyc07g054420.2.1	1669	358.343815774482	46.7339248760079	-2.93880234708629	1.01848236570029e-15	Down	3.01809110157943e-17	NA	NA	NA	K00558//DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37];K03363//cell division cycle 20, cofactor of APC complex;K01265//methionyl aminopeptidase [EC:3.4.11.18];K13457//disease resistance protein RPM1;K05658//ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:3.6.3.44]	gi|460395514|ref|XP_004243328.1|//PREDICTED: formimidoyltransferase-cyclodeaminase-like [Solanum lycopersicum]
Solyc01g099110.3.1	2485	2048.43515304363	569.404309518149	-1.84699690516939	4.77406479768655e-10	Down	3.21557145125227e-11	NA	GO:0046872//metal ion binding;GO:0016787//hydrolase activity	NA	K01262//Xaa-Pro aminopeptidase [EC:3.4.11.9]	gi|460368698|ref|XP_004230202.1|//PREDICTED: probable Xaa-Pro aminopeptidase P [Solanum lycopersicum];gi|359487802|ref|XP_002284554.2|//PREDICTED: probable Xaa-Pro aminopeptidase P [Vitis vinifera]
Solyc06g074940.3.1	2782	405.516194703971	1154.70283625436	1.50969018441834	0.0114904417250901	Up	0.00341312546992854	NA	GO:0032559//adenyl ribonucleotide binding;GO:0042626//ATPase activity, coupled to transmembrane movement of substances	GO:0009207//purine ribonucleoside triphosphate catabolic process	K06185//ATP-binding cassette, subfamily F, member 2	gi|460391357|ref|XP_004241289.1|//PREDICTED: ABC transporter F family member 1-like [Solanum lycopersicum]
Solyc11g009100.2.1	2619	9.89209286350784	0.41501144655722	-4.57505274977518	0.00308963147916224	Down	0.000778511584879109	GO:0044464//cell part	GO:0015604//organic phosphonate transmembrane transporter activity;GO:0032559//adenyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity	GO:0009207//purine ribonucleoside triphosphate catabolic process	K05681//ATP-binding cassette, subfamily G (WHITE), member 2	gi|723741506|ref|XP_010312634.1|//PREDICTED: ABC transporter G family member 11-like [Solanum lycopersicum]
Solyc02g072560.1.1	378	27.4944190683777	3.19038378501687	-3.10733691656344	0.00163275902538864	Down	0.000381350382178515	NA	NA	NA	NA	gi|970009287|ref|XP_015065518.1|//PREDICTED: transcription factor HBP-1b(c38)-like [Solanum pennellii]
Solyc08g005780.3.1	4333	291.320662981232	141.593727547854	-1.04085067654419	0.0155754416931283	Down	0.00482913562915361	NA	NA	NA	K19861//benzyl alcohol O-benzoyltransferase [EC:2.3.1.196 2.3.1.232];K01177//beta-amylase [EC:3.2.1.2]	gi|723719436|ref|XP_010324504.1|//PREDICTED: beta-amylase 8 isoform X4 [Solanum lycopersicum];gi|460397775|ref|XP_004244442.1|//PREDICTED: beta-amylase 8 isoform X2 [Solanum lycopersicum]
Solyc01g080570.3.1	3409	10.8639084493368	2344.35382334448	7.7535032887018	6.77062644449091e-54	Up	6.05691943744527e-57	NA	NA	NA	K01240//uridine nucleosidase [EC:3.2.2.3];K14319//Ran GTPase-activating protein 1	gi|697106453|ref|XP_009607062.1|//PREDICTED: uncharacterized protein LOC104101329 [Nicotiana tomentosiformis];gi|460367244|ref|XP_004229485.1|//PREDICTED: uncharacterized protein LOC101244900 [Solanum lycopersicum]
Solyc04g011600.3.1	3339	13.0667058608839	0.952972033583778	-3.77731779416175	0.0134483724679309	Down	0.00408644447437651	NA	GO:0008374//O-acyltransferase activity	NA	K13508//glycerol-3-phosphate acyltransferase [EC:2.3.1.15]	gi|460382014|ref|XP_004236735.1|//PREDICTED: glycerol-3-phosphate acyltransferase 5-like [Solanum lycopersicum]
Solyc07g042510.3.1	920	5.54443346090675	442.236056109671	6.3176327935937	1.10052322178257e-24	Up	1.27576681815409e-26	GO:0016020//membrane	NA	NA	K06890//uncharacterized protein	gi|460396231|ref|XP_004243681.1|//PREDICTED: BI1-like protein [Solanum lycopersicum]
Solyc02g070400.3.1	3114	648.572277608607	1817.50947694143	1.48662362265891	0.000181288443414203	Up	3.37668984546284e-05	GO:0031224//intrinsic component of membrane;GO:0043231//intracellular membrane-bounded organelle	GO:0030246//carbohydrate binding;GO:0035250//UDP-galactosyltransferase activity	GO:0006464//cellular protein modification process	K20843	gi|460374666|ref|XP_004233131.1|//PREDICTED: probable beta-1,3-galactosyltransferase 20 [Solanum lycopersicum]
Solyc07g006710.1.1	549	64.5322496518569	1.37976625887488	-5.54752452883959	7.1543880161969e-07	Down	8.09095468955621e-08	NA	NA	NA	K20412//peptidase inhibitor 16	gi|460394167|ref|XP_004242676.1|//PREDICTED: pathogenesis-related protein PR-1-like [Solanum lycopersicum]
Solyc11g010690.2.1	3783	228.577539228564	60.571012363486	-1.915984217193	0.00349469666250569	Down	0.00089386493581758	GO:0016021//integral component of membrane	GO:0005215//transporter activity	GO:0055085//transmembrane transport	K14611//solute carrier family 23 (nucleobase transporter), member 1/2	gi|661894572|emb|CDP01571.1|//unnamed protein product [Coffea canephora];gi|723741654|ref|XP_010312652.1|//PREDICTED: nucleobase-ascorbate transporter 11 isoform X2 [Solanum lycopersicum]
Solyc03g120680.3.1	4627	516.683216373106	188.932461418092	-1.45140942131162	2.78814870835226e-06	Down	3.56780770678891e-07	NA	GO:0016614//oxidoreductase activity, acting on CH-OH group of donors;GO:0000166//nucleotide binding	NA	K18606//hydroxyphenylpyruvate reductase [EC:1.1.1.237];K15919//hydroxypyruvate reductase 2	gi|460379844|ref|XP_004235670.1|//PREDICTED: hydroxyphenylpyruvate reductase-like isoform X2 [Solanum lycopersicum];gi|460379846|ref|XP_004235671.1|//PREDICTED: hydroxyphenylpyruvate reductase-like [Solanum lycopersicum]
Solyc04g010250.3.1	1251	1964.93617825385	7528.03745754419	1.93779135250186	0.00119074095762686	Up	0.000269101775238246	NA	NA	NA	K01054//acylglycerol lipase [EC:3.1.1.23]	gi|460382077|ref|XP_004236766.1|//PREDICTED: caffeoylshikimate esterase [Solanum lycopersicum]
Solyc06g051680.1.1	372	4.60578196075514	97.7662362780407	4.40781829401348	6.02971333052478e-11	Up	3.53538805312192e-12	NA	NA	NA	NA	gi|697151459|ref|XP_009629950.1|//PREDICTED: protein EARLY FLOWERING 4-like [Nicotiana tomentosiformis]
Solyc09g056430.3.1	1825	69.6705590178537	501.396903316382	2.84733204170419	3.36715423932879e-12	Up	1.62157569599404e-13	NA	GO:0016301//kinase activity	NA	K20714	gi|460403097|ref|XP_004247037.1|//PREDICTED: serine/threonine-protein kinase OXI1 [Solanum lycopersicum]
Solyc07g014670.3.1	1763	457.389993691838	5119.25856406504	3.48443816655847	2.93291151622568e-12	Up	1.39933157177907e-13	NA	NA	NA	K00517;K07408//cytochrome P450, family 1, subfamily A, polypeptide 1 [EC:1.14.14.1]	gi|460394569|ref|XP_004242874.1|//PREDICTED: cytochrome P450 81D11-like [Solanum lycopersicum]
Solyc01g005840.3.1	874	587.823280181317	249.113090860171	-1.23858165967861	0.00861470827105862	Down	0.00246900596004807	NA	GO:0019787//ubiquitin-like protein transferase activity	GO:0032446//protein modification by small protein conjugation	K20217//ubiquitin-conjugating enzyme E2 E [EC:2.3.2.23]	gi|460365631|ref|XP_004228704.1|//PREDICTED: constitutive photomorphogenesis protein 10 [Solanum lycopersicum]
Solyc03g026000.3.1	901	4.9288887388223	179.072027313714	5.18313376753591	3.52052152524933e-19	Up	7.11242979978058e-21	NA	NA	NA	K08360//cytochrome b-561 [EC:1.16.5.1]	gi|460377181|ref|XP_004234373.1|//PREDICTED: uncharacterized protein LOC101244747 [Solanum lycopersicum]
Solyc01g096010.3.1	6306	1033.41851061588	331.475669081248	-1.64044974780406	0.000665874006191421	Down	0.000141499467321354	NA	NA	NA	NA	gi|460368263|ref|XP_004229987.1|//PREDICTED: uncharacterized protein LOC101253533 [Solanum lycopersicum]
Solyc10g084180.2.1	2059	1527.29765731615	697.596681111648	-1.13051617705027	0.00261908730643402	Down	0.000646473689548459	NA	NA	NA	K14794//ribosomal RNA-processing protein 12;K12309//beta-galactosidase [EC:3.2.1.23]	gi|460408114|ref|XP_004249492.1|//PREDICTED: zinc finger protein JACKDAW [Solanum lycopersicum]
Solyc08g007718.1.1	852	40.0829527849621	1.61596127186906	-4.63252426326586	0.00229090159623882	Down	0.000555134608511576	NA	NA	NA	NA	NA
Solyc03g045070.1.1	1383	1253.74993118408	24.2694337812538	-5.69096536138329	1.18448948795414e-18	Down	2.52545097327332e-20	GO:0031224//intrinsic component of membrane	GO:0015101//organic cation transmembrane transporter activity	GO:0015696//ammonium transport	K03320//ammonium transporter, Amt family	gi|350535841|ref|NP_001234216.1|//ammonium transporter 1 member 3 [Solanum lycopersicum]
Solyc03g083100.3.1	1862	1248.35841515804	332.645318960947	-1.90797556752411	5.17519327868205e-06	Down	6.94835477479229e-07	NA	NA	NA	K14411//RNA-binding protein Musashi	gi|460378420|ref|XP_004234970.1|//PREDICTED: protein IQ-DOMAIN 1 [Solanum lycopersicum]
Solyc11g045185.1.1	1405	186.885435246855	489.454987833125	1.38902205184732	0.0056739685376316	Up	0.00154390824231067	NA	NA	NA	K19525//vacuolar protein sorting-associated protein 13A/C	gi|723744157|ref|XP_010313101.1|//PREDICTED: uncharacterized protein LOC101246789 isoform X2 [Solanum lycopersicum]
Solyc03g093510.2.1	1422	394.697703872859	1913.53340369592	2.2774190541202	1.37850546851983e-08	Up	1.16331309852724e-09	NA	NA	NA	NA	gi|460378852|ref|XP_004235182.1|//PREDICTED: putative lipase YOR059C isoform X2 [Solanum lycopersicum]
Solyc01g079550.2.1	823	22.1331747016752	73.2250386789092	1.72612664928033	0.00308933627325525	Up	0.000778206893344974	NA	NA	NA	NA	gi|460367074|ref|XP_004229400.1|//PREDICTED: uncharacterized protein LOC101245093 [Solanum lycopersicum]
Solyc03g097370.3.1	4224	6095.12513408191	406.092878792732	-3.90777420632446	1.96429972500275e-12	Down	9.12299633723508e-14	GO:0009941//chloroplast envelope;GO:0009570//chloroplast stroma	GO:0005524//ATP binding;GO:0016787//hydrolase activity;GO:0032559//adenyl ribonucleotide binding;GO:0003824//catalytic activity;GO:0003676//nucleic acid binding	NA	K14326//regulator of nonsense transcripts 1 [EC:3.6.4.-];K19036//ATP-dependent RNA/DNA helicase IGHMBP2 [EC:3.6.4.12 3.6.4.13]	gi|460379049|ref|XP_004235277.1|//PREDICTED: DNA-binding protein SMUBP-2 [Solanum lycopersicum];gi|590639873|ref|XP_007029793.1|//P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1 [Theobroma cacao]
Solyc08g005010.3.1	1846	3401.02483955748	1559.9590486669	-1.12446138626792	0.000424916180588307	Down	8.60982688861652e-05	NA	NA	NA	K01883//cysteinyl-tRNA synthetase [EC:6.1.1.16]	gi|460397666|ref|XP_004244388.1|//PREDICTED: uncharacterized protein LOC101260158 isoform X1 [Solanum lycopersicum]
Solyc12g013960.2.1	2597	295.244984072199	3063.15516719586	3.37503399500695	5.14679119128039e-18	Up	1.17600380209292e-19	NA	NA	NA	NA	gi|460412971|ref|XP_004251869.1|//PREDICTED: uncharacterized protein LOC101253258 [Solanum lycopersicum]
Solyc09g014350.3.1	1784	1598.59138383815	141.003670900223	-3.50299659100689	4.82627297580413e-14	Down	1.79537066864937e-15	NA	GO:0016747//transferase activity, transferring acyl groups other than amino-acyl groups	NA	K13508//glycerol-3-phosphate acyltransferase [EC:2.3.1.15]	gi|460401656|ref|XP_004246333.1|//PREDICTED: glycerol-3-phosphate 2-O-acyltransferase 6 [Solanum lycopersicum]
Solyc08g016581.1.1	553	0.486951739401012	115.607452091191	7.89123988464872	2.27680875613025e-11	Up	1.24599069164525e-12	NA	NA	NA	NA	gi|723680494|ref|XP_010317748.1|//PREDICTED: putative ubiquitin-like-specific protease 1B [Solanum lycopersicum]
Solyc08g008330.3.1	788	439.345764166869	960.179717865415	1.12794767723056	0.000427966364647745	Up	8.67960708978821e-05	NA	NA	NA	NA	gi|723720249|ref|XP_010324646.1|//PREDICTED: uncharacterized protein LOC101259769 [Solanum lycopersicum]
Solyc06g068950.3.1	1795	860.375522323637	161.431135824489	-2.41404761726309	3.94338989649342e-07	Down	4.27881615800371e-08	NA	GO:0016741//transferase activity, transferring one-carbon groups	GO:0006730//one-carbon metabolic process	K05929//phosphoethanolamine N-methyltransferase [EC:2.1.1.103]	gi|460392073|ref|XP_004241642.1|//PREDICTED: phosphoethanolamine N-methyltransferase [Solanum lycopersicum]
Solyc03g116680.3.1	1966	1155.43631360635	3495.23353523615	1.59695111077418	4.4164065822923e-06	Up	5.8209384504941e-07	NA	NA	NA	NA	gi|460380425|ref|XP_004235957.1|//PREDICTED: methyl-CpG-binding domain-containing protein 11-like [Solanum lycopersicum]
Solyc07g056270.3.1	2432	934.829749308246	343.602102517346	-1.44396478165497	0.000571374473568174	Down	0.000119565241337846	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004702//receptor signaling protein serine/threonine kinase activity	GO:0006464//cellular protein modification process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460395272|ref|XP_004243208.1|//PREDICTED: probable receptor-like protein kinase At2g42960 [Solanum lycopersicum]
Solyc12g013525.1.1	2530	113.484557100875	271.369198901873	1.25776099053121	0.0061928446531977	Up	0.00170310153016597	NA	NA	NA	K11252//histone H2B	gi|460413447|ref|XP_004252100.1|//PREDICTED: uncharacterized protein LOC101255966 [Solanum lycopersicum];gi|970064485|ref|XP_015059212.1|//PREDICTED: uncharacterized protein LOC107005197 [Solanum pennellii]
Solyc10g076260.2.1	6933	1350.99924024178	472.999832532788	-1.51411528545258	0.000305805051363374	Down	5.98775135981736e-05	NA	NA	NA	K07204//regulatory associated protein of mTOR	gi|723737696|ref|XP_010327714.1|//PREDICTED: regulatory-associated protein of TOR 1-like [Solanum lycopersicum]
Solyc01g099810.3.1	1942	580.093580758214	1353.29000435998	1.22211347608399	0.00498911610031628	Up	0.00133245179882086	NA	GO:0000166//nucleotide binding;GO:0003676//nucleic acid binding	NA	K12890//splicing factor, arginine/serine-rich 1/9	gi|460368791|ref|XP_004230248.1|//PREDICTED: serine/arginine-rich splicing factor SR30 isoform X1 [Solanum lycopersicum]
Solyc07g056140.3.1	2830	11310.6981804815	1617.5255192452	-2.80582760744895	1.02159630148284e-13	Down	3.95645801863975e-15	GO:0009536//plastid	GO:0032559//adenyl ribonucleotide binding;GO:0070566//adenylyltransferase activity	GO:0005977//glycogen metabolic process;GO:0005982//starch metabolic process	K00975//glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]	gi|927442682|ref|NP_001234696.2|//glucose-1-phosphate adenylyltransferase small subunit, chloroplastic [Solanum lycopersicum]
Solyc05g008100.1.1	399	2704.58219159945	596.881430248688	-2.17988946581675	2.53036122116698e-08	Down	2.20798256252866e-09	NA	NA	NA	NA	gi|723697585|ref|XP_010320709.1|//PREDICTED: extensin [Solanum lycopersicum]
Solyc12g088440.2.1	1943	506.900605495361	1954.6309257924	1.94712143063477	1.26362948434186e-11	Up	6.60829046716726e-13	NA	NA	NA	K08498//syntaxin 6	gi|460414787|ref|XP_004252744.1|//PREDICTED: uncharacterized protein LOC101257750 [Solanum lycopersicum]
Solyc01g108910.3.1	1586	1258.6492198027	3168.13887981254	1.3317593132771	0.0110501817074022	Up	0.00327081753908158	NA	NA	NA	NA	gi|460369977|ref|XP_004230833.1|//PREDICTED: uncharacterized protein LOC101255248 [Solanum lycopersicum]
Solyc09g083020.1.1	474	259.152063350062	649.747111069164	1.32607943374268	0.00909054953116804	Up	0.0026243591068621	NA	NA	NA	NA	gi|460404304|ref|XP_004247623.1|//PREDICTED: inactive protein RESTRICTED TEV MOVEMENT 1-like [Solanum lycopersicum]
Solyc11g044680.2.1	818	113.873659774598	42.5472457014912	-1.4202964273663	0.00728911000073462	Down	0.00205077539457078	GO:0044464//cell part	NA	NA	NA	gi|723744377|ref|XP_010313159.1|//PREDICTED: LOW QUALITY PROTEIN: putative membrane protein ycf1 [Solanum lycopersicum]
Solyc01g108570.3.1	1154	227.759991588239	52.4879908407594	-2.11745506533058	0.00110667362038586	Down	0.000248700434520141	NA	NA	NA	K13258//2-hydroxyisoflavanone dehydratase [EC:4.2.1.105];K20506//tuliposide A-converting enzyme [EC:4.2.99.22]	gi|460369939|ref|XP_004230814.1|//PREDICTED: 2-hydroxyisoflavanone dehydratase-like [Solanum lycopersicum]
Solyc01g060130.3.1	1033	253.378491690741	2894.12392174448	3.51376072703109	3.41867210913198e-16	Up	9.6591376872001e-18	GO:0043231//intracellular membrane-bounded organelle	GO:0032561//guanyl ribonucleotide binding	GO:0015031//protein transport	K07953//GTP-binding protein SAR1 [EC:3.6.5.-]	gi|350539267|ref|NP_001234640.1|//GTP-binding protein SAR2 [Solanum lycopersicum]
Solyc01g110605.1.1	438	32.6238254196229	0.821632100737456	-5.31128960184676	1.21302177388646e-05	Down	1.7493593421674e-06	NA	NA	NA	K14488//SAUR family protein	gi|460370310|ref|XP_004230996.1|//PREDICTED: auxin-induced protein 15A-like [Solanum lycopersicum]
Solyc01g106610.2.1	976	0.424949420667984	6.02667781424904	3.82599989975332	0.0223522125850021	Up	0.00732770648893296	NA	NA	GO:0006950//response to stress	K13449//pathogenesis-related protein 1	gi|808175927|ref|NP_001234128.2|//pathogenesis-related protein 1A1 precursor [Solanum lycopersicum]
Solyc10g074880.2.1	1555	449.527060106549	2404.82240461391	2.41945048620683	4.26156339539407e-08	Up	3.89335466009798e-09	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K07562//nonsense-mediated mRNA decay protein 3	gi|460407171|ref|XP_004249028.1|//PREDICTED: uncharacterized protein LOC101260284 [Solanum lycopersicum]
Solyc03g120320.1.1	1068	1.30074905819449	936.787016921906	9.49223460848203	8.21615373876427e-32	Up	5.23692518759763e-34	NA	NA	NA	NA	gi|723685332|ref|XP_010318559.1|//PREDICTED: F-box/kelch-repeat protein At1g80440-like [Solanum lycopersicum]
Solyc07g021340.3.1	512	58.4710654284726	4.24457638430738	-3.78403039683225	1.29751437013229e-06	Down	1.55781041680188e-07	NA	NA	NA	NA	gi|971581851|ref|XP_015159589.1|//PREDICTED: uncharacterized protein LOC107058417 [Solanum tuberosum]
Solyc05g052980.3.1	1573	931.890364226726	5143.93885995397	2.46464135647143	6.26747004157076e-07	Up	7.02952786457671e-08	NA	GO:0004721//phosphoprotein phosphatase activity	NA	K14497//protein phosphatase 2C [EC:3.1.3.16]	gi|460388512|ref|XP_004239911.1|//PREDICTED: protein phosphatase 2C 37 [Solanum lycopersicum]
Solyc12g009270.1.1	564	116.111808173149	28.5147060513631	-2.02573663117523	0.000379064914065428	Down	7.577624624023e-05	NA	NA	NA	K01051//pectinesterase [EC:3.1.1.11]	gi|460412639|ref|XP_004251705.1|//PREDICTED: 21 kDa protein-like [Solanum lycopersicum]
Solyc06g068690.3.1	6069	31.5242533554181	9.81263097462691	-1.68375029047938	0.00693399697865263	Down	0.00193432359431327	NA	NA	NA	K08054//calnexin	gi|723708984|ref|XP_010322636.1|//PREDICTED: glutamyl-tRNA(Gln) amidotransferase subunit A, mitochondrial-like isoform X1 [Solanum lycopersicum]
Solyc06g051630.4.1	1889	171.776445866218	392.603851045228	1.19254209779231	0.00338742721639798	Up	0.000862766146177405	NA	GO:0004629//phospholipase C activity	GO:0007165//signal transduction	K05857//phosphatidylinositol phospholipase C, delta [EC:3.1.4.11]	gi|914100381|ref|NP_001234176.2|//PI-phospholipase C PLC5 [Solanum lycopersicum]
Solyc08g005610.3.1	2130	285.787133924195	1275.0818708319	2.15757700986045	0.00139809920478532	Up	0.000320914525982853	NA	GO:0005506//iron ion binding;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K09843//(+)-abscisic acid 8'-hydroxylase [EC:1.14.13.93]	gi|460397763|ref|XP_004244436.1|//PREDICTED: abscisic acid 8'-hydroxylase 1 [Solanum lycopersicum]
Solyc06g073990.2.1	1231	133.31110424799	808.416298195114	2.6003014518825	0.000729897680558191	Up	0.000156655391555616	NA	NA	NA	NA	gi|723707706|ref|XP_010322447.1|//PREDICTED: uncharacterized protein LOC101259642 [Solanum lycopersicum]
Solyc05g006420.3.1	1461	1195.0601602263	91.3053573868099	-3.71023992262601	6.84249366995998e-13	Down	2.97643883735027e-14	NA	GO:0004871//signal transducer activity	GO:0007165//signal transduction;GO:0006351//transcription, DNA-templated	K14492//two-component response regulator ARR-A family	gi|970414587|ref|NP_001305076.1|//two-component response regulator ARR5 [Solanum lycopersicum]
Solyc11g005740.2.1	2236	1.42017965695563	24.3656894766528	4.10070569548705	7.93076237944029e-05	Up	1.35391723937068e-05	NA	NA	NA	K13172//serine/arginine repetitive matrix protein 2	gi|723740505|ref|XP_010312473.1|//PREDICTED: uncharacterized protein LOC101263371 isoform X3 [Solanum lycopersicum]
Solyc02g067530.3.1	1370	404.828879764387	1910.36122193041	2.23846133892614	2.47409147076256e-11	Up	1.36670775297082e-12	NA	GO:0019842//vitamin binding;GO:0046914//transition metal ion binding;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K00472//prolyl 4-hydroxylase [EC:1.14.11.2]	gi|460375096|ref|XP_004233344.1|//PREDICTED: probable prolyl 4-hydroxylase 6 [Solanum lycopersicum]
Solyc03g111310.3.1	1789	437.585217078372	4062.02642451511	3.21456371919786	1.38465207260542e-12	Up	6.29152704825557e-14	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	NA	gi|460381176|ref|XP_004236328.1|//PREDICTED: SNF1-related protein kinase regulatory subunit gamma-1 [Solanum lycopersicum];gi|970019912|ref|XP_015071163.1|//PREDICTED: SNF1-related protein kinase regulatory subunit gamma-1 [Solanum pennellii]
Solyc08g078210.3.1	1742	1106.84310382546	81.7061609054192	-3.75986205656205	7.91237230759614e-22	Down	1.22100869813061e-23	NA	NA	NA	K16911//ATP-dependent RNA helicase DDX21 [EC:3.6.4.13]	gi|460400562|ref|XP_004245803.1|//PREDICTED: nudix hydrolase 8 [Solanum lycopersicum];gi|970043761|ref|XP_015083286.1|//PREDICTED: nudix hydrolase 8-like [Solanum pennellii]
Solyc06g069170.3.1	561	4351.57629688472	1614.47136979312	-1.43047623431708	0.000466360259821069	Down	9.5399772845461e-05	NA	NA	NA	NA	gi|460392041|ref|XP_004241626.1|//PREDICTED: uncharacterized protein LOC101267534 [Solanum lycopersicum]
Solyc06g066620.3.1	1649	8729.50639825955	1715.65139530095	-2.34714364016951	2.04610417228419e-11	Down	1.10435322851778e-12	NA	NA	NA	NA	gi|460392260|ref|XP_004241735.1|//PREDICTED: protein CURVATURE THYLAKOID 1C, chloroplastic [Solanum lycopersicum]
Solyc06g035580.3.1	1987	613.533136643021	93.7725803995145	-2.70990322746347	0.000883247124910013	Down	0.000193914028840017	NA	GO:0003824//catalytic activity	NA	K15403//fatty acid omega-hydroxy dehydrogenase [EC:1.1.-.-];K00108//choline dehydrogenase [EC:1.1.99.1]	gi|955471894|ref|NP_001304261.1|//protein HOTHEAD precursor [Solanum lycopersicum]
Solyc09g092670.3.1	2125	1475.47602009712	10.7923011111756	-7.09503415764847	7.69826927663589e-31	Down	5.27986263195543e-33	NA	GO:0016705//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen;GO:0020037//heme binding;GO:0005506//iron ion binding;GO:0004497//monooxygenase activity	GO:0055114//oxidation-reduction process	K20617;K11818//cytochrome P450, family 83, subfamily B, polypeptide 1 [EC:1.14.-.-]	gi|460404881|ref|XP_004247907.1|//PREDICTED: cytochrome P450 83B1-like [Solanum lycopersicum]
Solyc10g085300.2.1	1053	473.720875421355	2696.1533894228	2.50879342302414	5.52320808540321e-16	Up	1.59141190175066e-17	NA	NA	NA	K17508//protein phosphatase PTC7 [EC:3.1.3.16]	gi|460408458|ref|XP_004249662.1|//PREDICTED: uncharacterized protein At5g01610 [Solanum lycopersicum]
Solyc02g082910.3.1	2105	22.6546621833218	430.51886768741	4.24819658251137	2.27274976962713e-14	Up	8.03103765322246e-16	NA	NA	NA	K00666//fatty-acyl-CoA synthase [EC:6.2.1.-];K01904//4-coumarate--CoA ligase [EC:6.2.1.12]	gi|460373485|ref|XP_004232549.1|//PREDICTED: probable acyl-activating enzyme 1, peroxisomal [Solanum lycopersicum]
Solyc07g054580.3.1	1984	446.912065357935	21.385667214573	-4.38527487004849	3.76801510748295e-08	Down	3.40171931948848e-09	NA	NA	NA	K14487//auxin responsive GH3 gene family	gi|460395496|ref|XP_004243319.1|//PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.5 [Solanum lycopersicum]
Solyc12g099740.2.1	3996	498.756639208398	113.390680409396	-2.13703397601232	0.000141198560789874	Down	2.56102652752173e-05	NA	NA	NA	K10615//E3 ubiquitin-protein ligase HERC4 [EC:2.3.2.26]	gi|460415083|ref|XP_004252890.1|//PREDICTED: E3 ubiquitin-protein ligase HERC2 isoform X2 [Solanum lycopersicum]
Solyc06g064940.3.1	2219	2315.19792726105	261.976102864674	-3.14362841334983	7.13501004000996e-10	Down	4.95472033119821e-11	NA	NA	NA	K19996//phosphatidylinositol transfer protein SFH5	gi|460392527|ref|XP_004241867.1|//PREDICTED: patellin-3-like [Solanum lycopersicum]
Solyc05g056200.1.1	1323	124.192143930032	585.684378392496	2.23754949949013	2.72204987301486e-07	Up	2.85719861428726e-08	NA	GO:0016301//kinase activity	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723700996|ref|XP_010321314.1|//PREDICTED: lysM domain receptor-like kinase 3 [Solanum lycopersicum]
Solyc03g078520.3.1	3121	1349.51727106716	3521.2979010889	1.38366384359685	3.56961408924106e-05	Up	5.6894549894121e-06	GO:0016021//integral component of membrane	GO:0004674//protein serine/threonine kinase activity;GO:0005524//ATP binding	GO:0006468//protein phosphorylation	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13418//somatic embryogenesis receptor kinase 1 [EC:2.7.10.1 2.7.11.1]	gi|723682634|ref|XP_010318078.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g10290 isoform X1 [Solanum lycopersicum];gi|970019241|ref|XP_015070817.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g10290 isoform X1 [Solanum pennellii]
Solyc08g008455.1.1	1610	423.755154751659	1185.87601751565	1.48465036196847	3.16336906292531e-05	Up	4.99125586825811e-06	NA	NA	NA	NA	gi|723720422|ref|XP_010324680.1|//PREDICTED: kinesin light chain 4-like [Solanum lycopersicum]
Solyc09g011640.4.1	889	17.0217847658881	89.4151115559291	2.39313635974239	0.0146725738069594	Up	0.0045114828288955	NA	NA	NA	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|460401748|ref|XP_004246379.1|//PREDICTED: probable glutathione S-transferase [Solanum lycopersicum]
Solyc12g010400.2.1	703	224.623715569978	2761.11663589432	3.6196696726198	3.5877291172044e-28	Up	2.9019577248895e-30	NA	NA	NA	K03768//peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8]	gi|723748177|ref|XP_010313839.1|//PREDICTED: uncharacterized protein LOC101248846 [Solanum lycopersicum]
Solyc05g006950.3.1	2840	936.061969997605	2063.88830872007	1.14068895001191	0.00446666974013704	Up	0.00117860276913785	GO:0017119//Golgi transport complex;GO:0005829//cytosol	NA	GO:0010016//shoot system morphogenesis;GO:0007030//Golgi organization;GO:0006890//retrograde vesicle-mediated transport, Golgi to ER;GO:0016049//cell growth;GO:0009933//meristem structural organization;GO:0006886//intracellular protein transport;GO:0045053//protein retention in Golgi apparatus;GO:0009793//embryo development ending in seed dormancy	K20294//conserved oligomeric Golgi complex subunit 7	gi|460386149|ref|XP_004238762.1|//PREDICTED: conserved oligomeric Golgi complex subunit 7 [Solanum lycopersicum]
Solyc10g055630.2.1	1205	4728.81489206222	940.958412293845	-2.32927580264133	0.0170060089681584	Down	0.00532848186172429	GO:0031224//intrinsic component of membrane	NA	GO:0006810//transport	K09872//aquaporin PIP	gi|902763248|ref|NP_001233846.2|//putative PIP-type aquaporin [Solanum lycopersicum]
Solyc03g120840.2.1	654	39.4245593342487	11.7711589916971	-1.74383825392662	0.00635854002757773	Down	0.00175601696229027	NA	NA	NA	K09286//EREBP-like factor	gi|460379816|ref|XP_004235656.1|//PREDICTED: ethylene-responsive transcription factor TINY-like [Solanum lycopersicum]
Solyc01g111950.3.1	1452	78.6003868431075	20.2551315146031	-1.95624896059883	0.0366225022592855	Down	0.0129669430803993	NA	GO:0005524//ATP binding;GO:0004672//protein kinase activity	GO:0006468//protein phosphorylation	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460371258|ref|XP_004231459.1|//PREDICTED: receptor-like cytosolic serine/threonine-protein kinase RBK1 [Solanum lycopersicum]
Solyc01g044420.3.1	2306	1.45505659306163	11.9449622844926	3.03725512696963	0.0144309341105703	Up	0.0044254253166855	NA	NA	NA	K06892//feruloyl-CoA ortho-hydroxylase [EC:1.14.11.-]	gi|460366208|ref|XP_004228981.1|//PREDICTED: uncharacterized protein LOC101246855 isoform X2 [Solanum lycopersicum]
Solyc05g012680.3.1	1067	150.751551631463	27.2264887960387	-2.46909000583007	3.20249027883413e-08	Down	2.84819658763166e-09	NA	NA	NA	NA	gi|460386798|ref|XP_004239083.1|//PREDICTED: uncharacterized protein At5g01610 [Solanum lycopersicum]
Solyc07g008670.3.1	3161	311.709915183454	100.51897017824	-1.63273625046676	0.0174484579810165	Down	0.00549508056812318	NA	NA	GO:0051513//regulation of monopolar cell growth	NA	gi|460394443|ref|XP_004242812.1|//PREDICTED: protein LONGIFOLIA 1 isoform X1 [Solanum lycopersicum]
Solyc02g081140.3.1	1460	1477.78640706296	4448.83957000418	1.58999131072754	3.31750652670982e-05	Up	5.26908279048402e-06	NA	NA	NA	K14012//UBX domain-containing protein 1	gi|460373759|ref|XP_004232681.1|//PREDICTED: UBA and UBX domain-containing protein At4g15410-like [Solanum lycopersicum]
Solyc05g005480.2.1	1585	14861.1511911845	700.052990284549	-4.40793793511837	4.20717022140337e-24	Down	5.1907460238725e-26	NA	GO:0003824//catalytic activity	NA	K18980//2-methylene-furan-3-one reductase [EC:1.3.1.105]	gi|823630988|ref|NP_001296292.1|//2-methylene-furan-3-one reductase [Solanum lycopersicum]
Solyc04g071570.3.1	3614	466.836334942825	181.612497351797	-1.36205337105587	0.000308288821286347	Down	6.04212994753098e-05	NA	NA	NA	K11426//SET and MYND domain-containing protein	gi|460385596|ref|XP_004238489.1|//PREDICTED: protein SET DOMAIN GROUP 41 [Solanum lycopersicum]
Solyc08g007910.3.1	2883	213.886817032577	1023.33218341105	2.25835506422688	4.79653056805192e-11	Up	2.74976293934093e-12	NA	NA	NA	K04424//sterile alpha motif and leucine zipper containing kinase AZK [EC:2.7.11.25];K14510//serine/threonine-protein kinase CTR1 [EC:2.7.11.1]	gi|460398106|ref|XP_004244604.1|//PREDICTED: putative proline-rich receptor-like protein kinase PERK11 isoform X1 [Solanum lycopersicum]
Solyc12g042300.2.1	2035	13.9993013859753	51.5913049730611	1.88177310566611	0.00768304401112108	Up	0.00217420866752763	NA	NA	NA	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460413842|ref|XP_004252286.1|//PREDICTED: protein NRT1/ PTR FAMILY 8.3-like isoform X1 [Solanum lycopersicum]
Solyc03g031820.3.1	2395	239.14928540112	70.4806614723116	-1.76261211107347	7.75825720677154e-05	Down	1.32099742509812e-05	GO:0005634//nucleus	GO:0008081//phosphoric diester hydrolase activity;GO:0017005//3'-tyrosyl-DNA phosphodiesterase activity	GO:0006281//DNA repair	K10862//tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]	gi|723679977|ref|XP_010317667.1|//PREDICTED: tyrosyl-DNA phosphodiesterase 1 [Solanum lycopersicum]
Solyc09g005670.2.1	1822	21.5016212832689	63.9645814542263	1.57282782813328	0.0445337858383323	Up	0.0163308254464557	NA	NA	NA	K20279//synaptojanin [EC:3.1.3.36];K01099//inositol polyphosphate 5-phosphatase INPP5B/F [EC:3.1.3.36];K05658//ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:3.6.3.44]	gi|723728686|ref|XP_010326053.1|//PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2 isoform X3 [Solanum lycopersicum];gi|460402868|ref|XP_004246932.1|//PREDICTED: uncharacterized protein LOC101250543 [Solanum lycopersicum]
Solyc01g111100.4.1	2250	91.543899149957	31.091877944833	-1.55792598440482	0.0440621431974435	Down	0.0161266655753577	NA	NA	NA	K11593//eukaryotic translation initiation factor 2C	gi|460370136|ref|XP_004230910.1|//PREDICTED: alkaline/neutral invertase CINV2 [Solanum lycopersicum]
Solyc02g065600.3.1	1571	9.85117759828072	0.382859300475544	-4.68540998394806	0.00202962416801555	Down	0.000485542265928277	NA	NA	NA	K16573//gamma-tubulin complex component 6	gi|460375220|ref|XP_004233405.1|//PREDICTED: protein trichome birefringence-like 19 [Solanum lycopersicum]
Solyc03g082363.1.1	601	3.48854905911758	37.2607403884982	3.4169573142218	1.27774714341033e-05	Up	1.85127596035335e-06	NA	NA	NA	K02942//large subunit ribosomal protein LP1	gi|970018521|ref|XP_015070431.1|//PREDICTED: 60S acidic ribosomal protein P1 [Solanum pennellii];gi|460378515|ref|XP_004235016.1|//PREDICTED: 60S acidic ribosomal protein P1-like [Solanum lycopersicum]
Solyc10g006520.3.1	1092	169.233754512088	70.5560894074262	-1.2621748434278	0.0156024587254147	Down	0.00483985617686376	NA	NA	NA	NA	gi|460405838|ref|XP_004248381.1|//PREDICTED: uncharacterized protein LOC101251227 [Solanum lycopersicum]
Solyc01g006350.3.1	2617	755.280550672208	1972.32390368017	1.38481195543165	2.93678384788384e-06	Up	3.77333156540017e-07	NA	NA	NA	K11000//callose synthase [EC:2.4.1.-]	gi|723655809|ref|XP_010315995.1|//PREDICTED: callose synthase 9 [Solanum lycopersicum]
Solyc12g096590.2.1	1316	1282.77403268345	561.352355832157	-1.19228852758126	0.00095461535277531	Down	0.000211504161953796	GO:0043234//protein complex	GO:0016765//transferase activity, transferring alkyl or aryl (other than methyl) groups	GO:0006771//riboflavin metabolic process	K00794//6,7-dimethyl-8-ribityllumazine synthase [EC:2.5.1.78]	gi|460415395|ref|XP_004253044.1|//PREDICTED: 6,7-dimethyl-8-ribityllumazine synthase, chloroplastic-like [Solanum lycopersicum]
Solyc07g006145.1.1	1627	766.808771646821	309.325837866007	-1.30973949410542	0.0145681638773778	Down	0.00447449196174121	NA	GO:0005506//iron ion binding;GO:0016491//oxidoreductase activity	NA	K07428//cytochrome P450, family 4, subfamily X [EC:1.14.14.1];K07426//cytochrome P450, family 4, subfamily B, polypeptide 1 [EC:1.14.14.1]	gi|460394084|ref|XP_004242635.1|//PREDICTED: cytochrome P450 CYP72A219-like [Solanum lycopersicum]
Solyc01g095530.2.1	547	3561.12769800186	29.7231665208159	-6.9046025400144	1.30773046953592e-35	Down	6.0443781952607e-38	NA	NA	NA	NA	gi|723661436|ref|XP_010326840.1|//PREDICTED: uncharacterized protein LOC104649409 [Solanum lycopersicum]
Solyc10g086710.2.1	1021	38.7573551664424	387.60671410796	3.32205153273782	5.07616727001633e-18	Up	1.15608252645742e-19	NA	NA	NA	NA	gi|460408495|ref|XP_004249680.1|//PREDICTED: uncharacterized protein LOC101253546 [Solanum lycopersicum]
Solyc06g073320.3.1	2287	67160.8087804725	11347.1834881137	-2.56528535683634	1.19557681769782e-10	Down	7.27738535597339e-12	NA	NA	NA	K14190//GDP-L-galactose phosphorylase [EC:2.7.7.69]	gi|525313819|ref|NP_001266145.1|//GDP-L-galactose phosphorylase [Solanum lycopersicum]
Solyc08g007180.3.1	2115	1028.87261055168	343.633258730567	-1.58212278621777	0.000417643732643245	Down	8.44223185524198e-05	NA	NA	NA	NA	gi|460398005|ref|XP_004244555.1|//PREDICTED: uncharacterized protein LOC101260362 [Solanum lycopersicum]
Solyc09g064520.3.1	3223	18.4449845706296	2.66679783462216	-2.79004821630196	0.00206178628759724	Down	0.000493851151189051	GO:0031224//intrinsic component of membrane	GO:0032559//adenyl ribonucleotide binding;GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;GO:0004702//receptor signaling protein serine/threonine kinase activity	GO:0006464//cellular protein modification process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K00924	gi|460403304|ref|XP_004247132.1|//PREDICTED: leucine-rich repeat receptor-like protein kinase PXL2 [Solanum lycopersicum]
Solyc08g067470.3.1	1916	476.264858990289	235.560474950163	-1.01566661647666	0.00452895842236626	Down	0.00119723323137847	NA	GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K09838//zeaxanthin epoxidase [EC:1.14.13.90]	gi|565404604|ref|XP_006367723.1|//PREDICTED: 6-hydroxynicotinate 3-monooxygenase isoform X2 [Solanum tuberosum];gi|460399378|ref|XP_004245218.1|//PREDICTED: zeaxanthin epoxidase, chloroplastic [Solanum lycopersicum]
Solyc01g111350.3.1	1928	131.428400789533	2378.81134281819	4.17789188889066	2.23981640298465e-10	Up	1.43098453657213e-11	NA	NA	NA	K14794//ribosomal RNA-processing protein 12	gi|460370369|ref|XP_004231025.1|//PREDICTED: uncharacterized protein LOC101261467 [Solanum lycopersicum]
Solyc08g075430.3.1	4002	407.768312107873	66.458665235519	-2.6172204439539	9.58755131524646e-13	Down	4.25628955436802e-14	GO:0044464//cell part	GO:0032559//adenyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity	GO:0009207//purine ribonucleoside triphosphate catabolic process	K05681//ATP-binding cassette, subfamily G (WHITE), member 2	gi|460400985|ref|XP_004246010.1|//PREDICTED: ABC transporter G family member 14 [Solanum lycopersicum]
Solyc01g087790.2.1	2656	215.755813887238	80.0663361140961	-1.43013174147347	0.0366931645007725	Down	0.0129988010815321	NA	GO:0004175//endopeptidase activity;GO:0005515//protein binding	GO:0044092//negative regulation of molecular function;GO:0019538//protein metabolic process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13199//plasminogen activator inhibitor 1 RNA-binding protein;K12663//Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase [EC:5.3.3.-];K01183//chitinase [EC:3.2.1.14]	gi|3970733|emb|CAA07060.1|//SBT4C protein [Solanum lycopersicum]
Solyc08g081250.3.1	3724	12465.1607931827	4623.48844614764	-1.43084780431887	4.83144780949536e-05	Down	7.86812117179262e-06	NA	NA	NA	K01256//aminopeptidase N [EC:3.4.11.2]	gi|723724294|ref|XP_010325395.1|//PREDICTED: puromycin-sensitive aminopeptidase isoform X1 [Solanum lycopersicum];gi|698477719|ref|XP_009786060.1|//PREDICTED: puromycin-sensitive aminopeptidase isoform X1 [Nicotiana sylvestris];gi|565354114|ref|XP_006343962.1|//PREDICTED: puromycin-sensitive aminopeptidase isoform X2 [Solanum tuberosum]
Solyc03g013630.3.1	2753	183.053074576846	396.846565983928	1.11631931603325	0.000648931592413482	Up	0.000137633098286593	NA	NA	NA	K13648//alpha-1,4-galacturonosyltransferase [EC:2.4.1.43];K20867	gi|723681961|ref|XP_010317525.1|//PREDICTED: probable galacturonosyltransferase 13 isoform X1 [Solanum lycopersicum];gi|460377026|ref|XP_004234296.1|//PREDICTED: probable galacturonosyltransferase 13 isoform X2 [Solanum lycopersicum]
Solyc04g015020.3.1	1339	3338.54147346091	9500.36323568847	1.5087647119112	0.00188567808636352	Up	0.000447943433889769	NA	NA	NA	NA	gi|460381854|ref|XP_004236656.1|//PREDICTED: neurofilament heavy polypeptide [Solanum lycopersicum]
Solyc08g081240.3.1	1510	576.790596165878	4974.01656444488	3.10829176343581	3.56505376064212e-09	Up	2.74807334762483e-10	NA	NA	NA	NA	gi|460400135|ref|XP_004245591.1|//PREDICTED: uncharacterized protein LOC101254118 [Solanum lycopersicum]
Solyc02g093335.1.1	2544	1037.35981829631	383.607510592125	-1.435213521652	0.0150438922926687	Down	0.00464359892931226	NA	NA	NA	K14297//nuclear pore complex protein Nup98-Nup96	gi|723669178|ref|XP_010315960.1|//PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X2 [Solanum lycopersicum];gi|723669175|ref|XP_004233600.2|//PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X1 [Solanum lycopersicum];gi|723669181|ref|XP_010315961.1|//PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X3 [Solanum lycopersicum];gi|723669184|ref|XP_010315962.1|//PREDICTED: nuclear pore complex protein Nup98-Nup96-like isoform X4 [Solanum lycopersicum]
Solyc05g015850.3.1	783	36.1439586875017	1964.06091085076	5.76394133515754	1.39624776688149e-16	Up	3.76801618913895e-18	NA	GO:0003677//DNA binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0010467//gene expression	K18835//WRKY transcription factor 2	gi|460387126|ref|XP_004239240.1|//PREDICTED: probable WRKY transcription factor 75 [Solanum lycopersicum]
Solyc11g072220.2.1	2056	92.6153455199295	237.858325667296	1.36077936446368	0.00105220013916763	Up	0.000235007575439556	NA	NA	NA	K08596//sentrin-specific protease 7 [EC:3.4.22.68]	gi|460411707|ref|XP_004251247.1|//PREDICTED: ubiquitin-like-specific protease 1D [Solanum lycopersicum]
Solyc04g016370.3.1	2917	1380.54255148151	630.08010900669	-1.1316281847173	8.77193410041211e-08	Down	8.47504591779789e-09	NA	NA	NA	K11665//DNA helicase INO80 [EC:3.6.4.12]	gi|460381705|ref|XP_004236584.1|//PREDICTED: DNA helicase INO80 [Solanum lycopersicum]
Solyc11g006465.1.1	1735	8978.31304176109	45104.2493839439	2.32874705591066	3.06159590963492e-20	Up	5.50055624140462e-22	NA	NA	NA	K09503//DnaJ homolog subfamily A member 2	gi|976925731|gb|KVI09623.1|//Chaperone DnaJ, C-terminal, partial [Cynara cardunculus var. scolymus];gi|806638830|ref|NP_001234241.2|//DnaJ-like protein [Solanum lycopersicum]
Solyc03g113940.3.1	2174	5.74260846157093	243.580224753571	5.40654700120123	2.60090845575385e-19	Up	5.19638784957531e-21	NA	NA	NA	NA	gi|723688430|ref|XP_004236140.2|//PREDICTED: uncharacterized protein LOC101255977 [Solanum lycopersicum]
Solyc09g083350.3.1	3250	1447.02237766101	457.01523889537	-1.66277305579521	1.04061901256488e-07	Down	1.01587192258365e-08	NA	NA	NA	K01148//poly(A)-specific ribonuclease [EC:3.1.13.4]	gi|460404351|ref|XP_004247646.1|//PREDICTED: chloroplastic group IIA intron splicing facilitator CRS1, chloroplastic-like [Solanum lycopersicum]
Solyc04g008620.3.1	3443	2304.74059655493	7013.31094570627	1.60549131208347	2.16659157038823e-10	Up	1.38240088916589e-11	NA	NA	NA	K12486//stromal membrane-associated protein;K01652//acetolactate synthase I/II/III large subunit [EC:2.2.1.6]	gi|460382321|ref|XP_004236888.1|//PREDICTED: tricalbin-3 [Solanum lycopersicum]
Solyc02g082270.3.1	3314	1286.46652426517	3270.9807383966	1.34630934741333	5.76749275040402e-05	Up	9.57307485371594e-06	NA	GO:0000166//nucleotide binding;GO:0003676//nucleic acid binding	NA	K12741//heterogeneous nuclear ribonucleoprotein A1/A3	gi|460373577|ref|XP_004232592.1|//PREDICTED: RNA-binding protein 24 isoform X1 [Solanum lycopersicum];gi|723673351|ref|XP_010316496.1|//PREDICTED: RNA-binding protein 24 isoform X2 [Solanum lycopersicum]
Solyc07g063733.1.1	928	338.372492013803	97.9545846951092	-1.78842736584762	0.000926274953988561	Down	0.000204534547019093	NA	NA	NA	K15082//DNA repair protein RAD7	gi|460397218|ref|XP_004244165.1|//PREDICTED: uncharacterized protein LOC101261728 [Solanum lycopersicum]
Solyc08g044390.1.1	1593	9.75502837296931	1.18545736812763	-3.04070228798771	0.0399994975099467	Down	0.0143698806098429	NA	NA	NA	NA	gi|672166123|ref|XP_008802982.1|//PREDICTED: uncharacterized protein LOC103716664 [Phoenix dactylifera]
Solyc08g066440.3.1	2652	587.966172711323	2176.1878404752	1.887998029653	0.00197434706923626	Up	0.000471140969779727	NA	NA	NA	K01054//acylglycerol lipase [EC:3.1.1.23]	gi|460399245|ref|XP_004245152.1|//PREDICTED: monoglyceride lipase [Solanum lycopersicum]
Solyc11g068810.2.1	709	826.250586061213	259.158295435821	-1.67274581602871	0.000341050811698521	Down	6.75411211762657e-05	NA	NA	NA	NA	gi|998614185|ref|NP_001307274.1|//uncharacterized LOC101244341 [Solanum lycopersicum]
Solyc05g052160.3.1	1499	509.912933406186	153.9511559194	-1.72777823119059	0.000112729385578396	Down	1.99633707649828e-05	GO:0009527//plastid outer membrane	GO:0008320//protein transmembrane transporter activity;GO:0032561//guanyl ribonucleotide binding	GO:0015031//protein transport	K08819//cyclin-dependent kinase 12/13 [EC:2.7.11.22 2.7.11.23]	gi|460388645|ref|XP_004239977.1|//PREDICTED: translocase of chloroplast 34, chloroplastic-like [Solanum lycopersicum]
Solyc02g089920.1.1	1851	3.51677188427562	71.206345101229	4.33968214095884	9.55759632623339e-10	Up	6.7510231989758e-11	NA	GO:0016301//kinase activity	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460375710|ref|XP_004233647.1|//PREDICTED: protein LYK5-like [Solanum lycopersicum]
Solyc08g076810.3.1	2937	490.554524615638	242.1296718884	-1.0186336135056	0.00232364837403564	Down	0.000564106217859346	NA	GO:0046983//protein dimerization activity	NA	K09753//cinnamoyl-CoA reductase [EC:1.2.1.44];K18485//myogenic factor 6;K05283//phosphatidylinositol glycan, class W [EC:2.3.-.-]	gi|460400772|ref|XP_004245906.1|//PREDICTED: cinnamoyl-CoA reductase 2-like isoform X2 [Solanum lycopersicum];gi|525314011|ref|NP_001265931.1|//Hop-interacting protein THI018 [Solanum lycopersicum];gi|723725574|ref|XP_010325560.1|//PREDICTED: tetraketide alpha-pyrone reductase 1-like isoform X3 [Solanum lycopersicum];gi|460400768|ref|XP_004245904.1|//PREDICTED: uncharacterized protein At4g17910 [Solanum lycopersicum];gi|460400770|ref|XP_004245905.1|//PREDICTED: tetraketide alpha-pyrone reductase 1-like isoform X1 [Solanum lycopersicum]
Solyc12g056960.2.1	1809	232.638499823239	844.238075925769	1.85956002652149	3.56138240140062e-08	Up	3.19393397113832e-09	NA	GO:0043167//ion binding;GO:0016798//hydrolase activity, acting on glycosyl bonds	GO:0044238//primary metabolic process	NA	gi|723751749|ref|XP_004252539.2|//PREDICTED: probable glucan 1,3-beta-glucosidase A [Solanum lycopersicum]
Solyc10g006370.3.1	769	2854.0820358934	518.501090262884	-2.46060787556669	8.09572400308058e-25	Down	9.11327213705955e-27	NA	NA	NA	NA	gi|723734731|ref|XP_010327169.1|//PREDICTED: protein LHCP TRANSLOCATION DEFECT [Solanum lycopersicum]
Solyc02g076910.3.1	1203	1.1527578589784	16.6220909172935	3.84994046572296	0.0136956569306106	Up	0.00417026321254503	NA	NA	NA	K16292//KDEL-tailed cysteine endopeptidase [EC:3.4.22.-]	gi|460374511|ref|XP_004233054.1|//PREDICTED: senescence-specific cysteine protease SAG39-like [Solanum lycopersicum]
Solyc09g005920.3.1	2628	448.84283936804	1294.51320762285	1.52812740054616	0.00334465875664455	Up	0.000850003108796874	NA	NA	NA	NA	gi|460402466|ref|XP_004246733.1|//PREDICTED: protein GPR107 [Solanum lycopersicum]
Solyc07g041870.3.1	2192	1581.59959973036	734.47372630632	-1.10660162252928	0.00320390354021163	Down	0.000810161339500835	GO:0009507//chloroplast	GO:0016881//acid-amino acid ligase activity;GO:0016874//ligase activity	GO:0006464//cellular protein modification process;GO:0043412//macromolecule modification	K16609//tubulin--tyrosine ligase-like protein 12	gi|460396290|ref|XP_004243709.1|//PREDICTED: tubulin--tyrosine ligase-like protein 12 [Solanum lycopersicum];gi|698571254|ref|XP_009774830.1|//PREDICTED: tubulin--tyrosine ligase-like protein 12 [Nicotiana sylvestris];gi|565350855|ref|XP_006342377.1|//PREDICTED: tubulin--tyrosine ligase-like protein 12 [Solanum tuberosum];gi|697120846|ref|XP_009614393.1|//PREDICTED: tubulin--tyrosine ligase-like protein 12 [Nicotiana tomentosiformis]
Solyc12g044180.2.1	4050	8.00065823353247	1.07527348158981	-2.89541506200952	0.0386099641760015	Down	0.0137828994674805	NA	NA	NA	K13459//disease resistance protein RPS2	gi|970065752|ref|XP_015059836.1|//PREDICTED: probable disease resistance protein At1g61300 isoform X2 [Solanum pennellii]
Solyc04g005100.3.1	3316	1044.41060019866	263.734571094685	-1.98553040403334	2.94488435849764e-08	Down	2.60042904625053e-09	NA	NA	NA	K08869//aarF domain-containing kinase;K15803//(-)-germacrene D synthase [EC:4.2.3.22 4.2.3.75];K17613//calcineurin-binding protein cabin-1	gi|460382696|ref|XP_004237073.1|//PREDICTED: transcription factor MYB1R1 [Solanum lycopersicum]
Solyc09g011720.3.1	4457	571.442713846504	99.1244012752636	-2.52729672609812	0.000834600877613035	Down	0.000182020640186144	NA	NA	NA	K15026//translation initiation factor 2A	gi|460401734|ref|XP_004246372.1|//PREDICTED: uncharacterized protein LOC101262946 [Solanum lycopersicum]
Solyc08g006310.3.1	2656	749.256562771204	212.149546944886	-1.82037821773321	0.00109964076838722	Down	0.000246956002293612	NA	GO:0016740//transferase activity	NA	K20887	gi|460397858|ref|XP_004244483.1|//PREDICTED: probable xyloglucan glycosyltransferase 5 [Solanum lycopersicum]
Solyc10g080810.2.1	1431	740.612951388345	1679.97535714648	1.18164838705589	0.00060322001257875	Up	0.000127218534037967	NA	NA	NA	K01365//cathepsin L [EC:3.4.22.15]	gi|460407748|ref|XP_004249312.1|//PREDICTED: ubiquitin-associated domain-containing protein 2 [Solanum lycopersicum]
Solyc12g005930.2.1	1964	800.396821016747	293.261253444173	-1.44852896672525	1.89161526504246e-06	Down	2.3408985686376e-07	NA	NA	NA	K20165//TBC1 domain family member 2A	gi|460412271|ref|XP_004251525.1|//PREDICTED: growth hormone-regulated TBC protein 1-like [Solanum lycopersicum]
Solyc02g077350.1.1	282	1.34635534924359	10.2581541769471	2.9296400179556	0.014136669871033	Up	0.0043198307590103	NA	NA	NA	NA	gi|460377468|ref|XP_004234515.1|//PREDICTED: uncharacterized protein LOC101265314 isoform X1 [Solanum lycopersicum]
Solyc04g040180.3.1	1179	406.56455862517	14885.5218501919	5.19428153273259	1.52707158641165e-17	Up	3.70554496329949e-19	NA	GO:0016741//transferase activity, transferring one-carbon groups	GO:0006730//one-carbon metabolic process	K08869//aarF domain-containing kinase	gi|460383231|ref|XP_004237334.1|//PREDICTED: putative methyltransferase DDB_G0268948 [Solanum lycopersicum]
Solyc07g049460.3.1	1880	24.2896431161597	1.1664840975537	-4.38010274824856	0.000205583209990931	Down	3.88054784327595e-05	NA	NA	NA	K05909//laccase [EC:1.10.3.2]	gi|930425320|ref|NP_001233816.2|//laccase precursor [Solanum lycopersicum]
Solyc05g008390.3.1	1606	68.2579831166295	345.612777746509	2.34008686526817	6.1634000491067e-05	Up	1.03175151410982e-05	GO:0016021//integral component of membrane	GO:0008270//zinc ion binding	NA	K10661//E3 ubiquitin-protein ligase MARCH6 [EC:2.3.2.27]	gi|460386354|ref|XP_004238863.1|//PREDICTED: uncharacterized protein LOC101260726 [Solanum lycopersicum]
Solyc02g065010.1.1	300	16.8232041318699	52.3976778783217	1.63905037076003	0.0200206963513074	Up	0.00644247322203806	NA	NA	NA	K02183//calmodulin	gi|223537128|gb|EEF38761.1|//conserved hypothetical protein [Ricinus communis]
Solyc09g005280.3.1	1904	264.06367601248	587.087327557536	1.15268925468456	0.000864928259977945	Up	0.000189537544371938	NA	NA	NA	NA	gi|723728837|ref|XP_010326088.1|//PREDICTED: uncharacterized protein LOC101253714 isoform X1 [Solanum lycopersicum];gi|723728840|ref|XP_010326089.1|//PREDICTED: uncharacterized protein LOC101253714 isoform X2 [Solanum lycopersicum]
Solyc05g053570.3.1	6304	204.625749581619	31.9121522589352	-2.68080988452679	3.43327195490779e-10	Down	2.26385048763675e-11	GO:0016020//membrane	GO:0000166//nucleotide binding;GO:0017111//nucleoside-triphosphatase activity	NA	K05681//ATP-binding cassette, subfamily G (WHITE), member 2	gi|723701755|ref|XP_004239867.2|//PREDICTED: pleiotropic drug resistance protein 1-like [Solanum lycopersicum];gi|698588671|ref|XP_009779532.1|//PREDICTED: pleiotropic drug resistance protein 1-like isoform X1 [Nicotiana sylvestris]
Solyc11g008430.2.1	1067	657.006043671532	1596.58041388003	1.2810066711841	9.37123015171949e-05	Up	1.62602789459722e-05	NA	GO:0032561//guanyl ribonucleotide binding	GO:0006810//transport;GO:0035556//intracellular signal transduction	K07889//Ras-related protein Rab-5C	gi|460409264|ref|XP_004250059.1|//PREDICTED: ras-related protein RABF1 [Solanum lycopersicum]
Solyc06g084420.1.1	1206	209.440808911173	59.8836805369295	-1.80630777510328	0.0258827014390207	Down	0.00869029329137053	NA	NA	NA	K20718	gi|460393450|ref|XP_004242322.1|//PREDICTED: LRR receptor-like serine/threonine-protein kinase ERL1 [Solanum lycopersicum]
Solyc11g008620.2.1	1549	21001.6738546825	3911.32087495387	-2.42477651560914	5.84632106969641e-26	Down	5.99276239066093e-28	NA	GO:0016791//phosphatase activity	GO:0006796//phosphate-containing compound metabolic process	K19269//phosphoglycolate phosphatase [EC:3.1.3.18 3.1.3.48]	gi|460409293|ref|XP_004250073.1|//PREDICTED: phosphoglycolate phosphatase 1B, chloroplastic [Solanum lycopersicum]
Solyc04g005070.3.1	1722	1583.84931139457	192.858755949251	-3.03781853073285	0.00241136313169616	Down	0.000588819139546055	NA	NA	NA	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460382704|ref|XP_004237077.1|//PREDICTED: protein NRT1/ PTR FAMILY 1.2-like [Solanum lycopersicum]
Solyc09g018020.3.1	1339	87.0371203371114	393.033737348493	2.17495042602531	1.01096712914386e-05	Up	1.43912459601923e-06	GO:0044464//cell part	NA	NA	K20628	gi|460401530|ref|XP_004246275.1|//PREDICTED: expansin-A10-like [Solanum lycopersicum]
Solyc01g100440.2.1	2255	3.9652610364882	90.451205579739	4.51165198394597	3.26094877547296e-09	Up	2.49664111555892e-10	NA	NA	NA	NA	gi|723663144|ref|XP_010313497.1|//PREDICTED: uncharacterized protein LOC104644784 isoform X1 [Solanum lycopersicum]
Solyc01g097830.2.1	1267	126.719197919567	7.87850475211719	-4.00756944961969	8.14206898466434e-11	Down	4.84675867321789e-12	NA	NA	NA	K10406//kinesin family member C2/C3	gi|723662160|ref|XP_010312141.1|//PREDICTED: uncharacterized protein LOC104644367 [Solanum lycopersicum]
Solyc02g079170.3.1	2276	1173.5401520498	17909.0702944298	3.93175133642545	1.31056503206884e-12	Up	5.9353530414628e-14	NA	GO:0050136//NADH dehydrogenase (quinone) activity;GO:0046872//metal ion binding;GO:0050662//coenzyme binding	GO:0008152//metabolic process	K17871//NADH:ubiquinone reductase (non-electrogenic) [EC:1.6.5.9]	gi|460373993|ref|XP_004232796.1|//PREDICTED: external alternative NAD(P)H-ubiquinone oxidoreductase B2, mitochondrial [Solanum lycopersicum]
Solyc12g098600.1.1	1392	1414.19191148118	127.155327609189	-3.47531409783109	9.80169893537794e-09	Down	8.06700136026334e-10	NA	NA	NA	K13692//UDP-glucose:(indol-3-yl)acetate beta-D-glucosyltransferase [EC:2.4.1.121]	gi|460415259|ref|XP_004252977.1|//PREDICTED: crocetin glucosyltransferase, chloroplastic-like [Solanum lycopersicum]
Solyc02g088460.3.1	1181	1543.11723905067	5625.50893566603	1.86613594629581	1.63407197625446e-08	Up	1.38751154089297e-09	GO:0043231//intracellular membrane-bounded organelle;GO:0044444//cytoplasmic part	GO:0004601//peroxidase activity;GO:0016866//intramolecular transferase activity	GO:0043648//dicarboxylic acid metabolic process;GO:0008652//cellular amino acid biosynthetic process	K01850//chorismate mutase [EC:5.4.99.5]	gi|460372757|ref|XP_004232192.1|//PREDICTED: chorismate mutase 1, chloroplastic [Solanum lycopersicum]
Solyc03g097360.3.1	916	1275.40249469673	530.069799453943	-1.26669835722831	8.29470057152829e-05	Down	1.42192216819959e-05	GO:0005739//mitochondrion;GO:0009507//chloroplast	NA	NA	K05527//BolA protein	gi|460379196|ref|XP_004235350.1|//PREDICTED: uncharacterized protein LOC101268264 [Solanum lycopersicum]
Solyc06g051260.3.1	883	134.464512992991	14.9862479190581	-3.16551434769625	2.98760267393181e-12	Down	1.42653907309775e-13	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K16189//phytochrome-interacting factor 4;K12126//phytochrome-interacting factor 3;K13422//transcription factor MYC2	gi|460390614|ref|XP_004240923.1|//PREDICTED: transcription factor bHLH51 [Solanum lycopersicum]
Solyc10g005360.3.1	1331	9.3663558723103	216.70769222417	4.53211869989518	1.75875620847234e-10	Up	1.10594219609842e-11	NA	GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K04125//gibberellin 2-oxidase [EC:1.14.11.13]	gi|723735055|ref|XP_004248394.2|//PREDICTED: gibberellin 2-beta-dioxygenase 8 [Solanum lycopersicum]
Solyc07g064130.2.1	3061	73959.5566896415	221315.191425782	1.58129400098431	0.00049763849704486	Up	0.000102410248329532	GO:0043231//intracellular membrane-bounded organelle	NA	GO:0032502//developmental process;GO:0010033//response to organic substance;GO:0043412//macromolecule modification	K08770//ubiquitin C	gi|723718419|ref|XP_010324326.1|//PREDICTED: polyubiquitin isoform X1 [Solanum lycopersicum];gi|823134063|ref|XP_012466865.1|//PREDICTED: polyubiquitin-like [Gossypium raimondii]
Solyc02g080610.3.1	604	258.943452692978	34.1132780268615	-2.92423178206292	3.69277640364514e-08	Down	3.32828885642386e-09	NA	NA	NA	NA	gi|723673859|ref|XP_010316589.1|//PREDICTED: uncharacterized protein LOC101252247 [Solanum lycopersicum]
Solyc10g081980.2.1	1124	1000.03876379218	11106.621391505	3.47329219061582	4.93513070516129e-07	Up	5.43585479117028e-08	GO:0016021//integral component of membrane	NA	NA	K08488//syntaxin 7	gi|970057174|ref|XP_015055240.1|//PREDICTED: protein YLS9-like [Solanum pennellii]
Solyc11g008660.1.1	902	121.803539674206	12.0417416116046	-3.3384400882978	3.34678876639514e-07	Down	3.58032047098332e-08	NA	GO:0008429//phosphatidylethanolamine binding	GO:0009909//regulation of flower development;GO:0048573//photoperiodism, flowering	K16223//protein FLOWERING LOCUS T	gi|970062111|ref|XP_015057941.1|//PREDICTED: protein FLOWERING LOCUS T-like [Solanum pennellii]
Solyc03g116890.3.1	1861	1208.41930880944	27837.2753606082	4.52582496422029	7.89400818477062e-32	Up	4.94331808200933e-34	NA	NA	NA	K13424//WRKY transcription factor 33;K18834//WRKY transcription factor 1	gi|948284301|ref|NP_001303844.1|//probable WRKY transcription factor 40 [Solanum lycopersicum]
Solyc01g087020.2.1	622	399.432740849186	8831.71041650299	4.46666837017816	4.18907744825979e-18	Up	9.39997250578648e-20	NA	NA	NA	NA	gi|643729518|gb|KDP37350.1|//hypothetical protein JCGZ_06804 [Jatropha curcas]
Solyc08g068590.3.1	2579	1966.28442919602	870.866559959917	-1.17494844570663	3.19544994326714e-05	Down	5.0490205417882e-06	NA	NA	NA	K01590//histidine decarboxylase [EC:4.1.1.22]	gi|460399501|ref|XP_004245278.1|//PREDICTED: probable plastid-lipid-associated protein 10, chloroplastic isoform X2 [Solanum lycopersicum];gi|723723210|ref|XP_010325177.1|//PREDICTED: probable plastid-lipid-associated protein 10, chloroplastic isoform X1 [Solanum lycopersicum];gi|460399505|ref|XP_004245280.1|//PREDICTED: histidine decarboxylase-like isoform X1 [Solanum lycopersicum]
Solyc04g055000.3.1	3025	29.1275822805139	297.43466588817	3.35211494127889	5.45291123905165e-09	Up	4.32322282893352e-10	NA	NA	NA	K09527//DnaJ homolog subfamily C member 7	gi|460383375|ref|XP_004237401.1|//PREDICTED: inactive TPR repeat-containing thioredoxin TTL3-like [Solanum lycopersicum]
Solyc08g068200.3.1	1738	1672.15115585115	256.019914525063	-2.70737732741281	1.11356184376767e-06	Down	1.32284240200073e-07	NA	NA	NA	K03978//GTP-binding protein	gi|460399457|ref|XP_004245257.1|//PREDICTED: GTP-binding protein At2g22870 [Solanum lycopersicum]
Solyc04g008030.2.1	1963	106.364853058435	267.871132159551	1.33251760474499	0.014069791446571	Up	0.00429677207849099	NA	NA	NA	K13148//integrator complex subunit 11 [EC:3.1.27.-]	gi|723691074|ref|XP_010319559.1|//PREDICTED: cleavage and polyadenylation specificity factor subunit 3-II [Solanum lycopersicum]
Solyc02g030230.3.1	1964	94.7060622999151	195.697008252753	1.04709301753415	0.00436576715349221	Up	0.00114904882476549	NA	NA	NA	K12448//UDP-arabinose 4-epimerase [EC:5.1.3.5]	gi|460371500|ref|XP_004231574.1|//PREDICTED: UDP-arabinose 4-epimerase 1 isoform X1 [Solanum lycopersicum];gi|723667914|ref|XP_010315643.1|//PREDICTED: UDP-arabinose 4-epimerase 1 isoform X2 [Solanum lycopersicum];gi|723667917|ref|XP_010315644.1|//PREDICTED: UDP-arabinose 4-epimerase 1 isoform X3 [Solanum lycopersicum]
Solyc04g016400.3.1	2290	342.042468912845	1114.92164016234	1.70469494679022	0.000444036018761992	Up	9.03211299873219e-05	NA	NA	NA	K13448//calcium-binding protein CML	gi|460381701|ref|XP_004236582.1|//PREDICTED: probable calcium-binding protein CML50 [Solanum lycopersicum]
Solyc10g005210.3.1	1963	136.062672720057	43.3806281442816	-1.64914848553565	0.0145523180202129	Down	0.00446854017632748	NA	NA	NA	K01246//DNA-3-methyladenine glycosylase I [EC:3.2.2.20]	gi|460405888|ref|XP_004248406.1|//PREDICTED: uncharacterized protein LOC101258999 [Solanum lycopersicum]
Solyc01g009700.2.1	2879	343.68618786286	1384.36207538951	2.01005754587687	0.0195754374783777	Up	0.00627511414619234	GO:0016021//integral component of membrane	NA	NA	K10406//kinesin family member C2/C3	gi|723654952|ref|XP_010326133.1|//PREDICTED: receptor-like protein 12 isoform X2 [Solanum lycopersicum];gi|970001077|ref|XP_015056491.1|//PREDICTED: receptor-like protein 12 isoform X1 [Solanum pennellii]
Solyc01g007780.3.1	3390	271.208726959819	1511.05751857957	2.47808307049832	8.74665970545094e-11	Up	5.23599801958932e-12	NA	NA	NA	K17338//receptor expression-enhancing protein 1/2/3/4	gi|460365353|ref|XP_004228567.1|//PREDICTED: uncharacterized protein LOC101255523 [Solanum lycopersicum];gi|460365351|ref|XP_004228566.1|//PREDICTED: putative HVA22-like protein g [Solanum lycopersicum]
Solyc01g108120.3.1	1318	191.70624174955	628.530124147049	1.71308458131462	1.2651597263135e-05	Up	1.83068065362644e-06	NA	NA	NA	NA	gi|460369873|ref|XP_004230781.1|//PREDICTED: B3 domain-containing protein At5g42700 [Solanum lycopersicum]
Solyc06g048920.3.1	1853	307.668979216721	147.675867086035	-1.05894490816283	0.0444233628879971	Down	0.0162788557905364	GO:0044424//intracellular part;GO:0043234//protein complex	GO:0016616//oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	GO:0006071//glycerol metabolic process;GO:0009814//defense response, incompatible interaction;GO:0044255//cellular lipid metabolic process;GO:0008610//lipid biosynthetic process	K00006//glycerol-3-phosphate dehydrogenase (NAD+) [EC:1.1.1.8]	gi|460390477|ref|XP_004240858.1|//PREDICTED: glycerol-3-phosphate dehydrogenase [NAD(+)] 2, chloroplastic [Solanum lycopersicum]
Solyc12g006860.2.1	2249	131.441375900347	12.8685866100542	-3.35249397483668	8.30230287176578e-08	Down	7.99036305907978e-09	NA	GO:0005506//iron ion binding;GO:0016491//oxidoreductase activity	NA	K15639//PHYB activation tagged suppressor 1 [EC:1.14.-.-]	gi|807066312|ref|NP_001234737.2|//putative brassinosteroid hydroxylase [Solanum lycopersicum]
Solyc03g119350.2.1	1279	25.4598560821063	3.39958223106491	-2.9047948920811	0.00155103852887252	Down	0.00036027400572427	NA	NA	NA	NA	gi|743842129|ref|XP_010937723.1|//PREDICTED: uncharacterized protein LOC105057002 isoform X3 [Elaeis guineensis]
Solyc05g053000.1.1	942	113.529374266376	244.949653887436	1.1094196284881	0.0262175951397115	Up	0.00882063566911569	NA	NA	NA	NA	gi|460388508|ref|XP_004239909.1|//PREDICTED: putative DNA-binding protein ESCAROLA [Solanum lycopersicum]
Solyc10g086730.2.1	1912	7065.1220374944	1171.08992630238	-2.59286261822184	3.3187677182315e-20	Down	6.036822150354e-22	NA	NA	NA	K03841//fructose-1,6-bisphosphatase I [EC:3.1.3.11]	gi|460408392|ref|XP_004249629.1|//PREDICTED: fructose-1,6-bisphosphatase, chloroplastic [Solanum lycopersicum]
Solyc03g117350.1.1	1798	211.42492434911	591.56321396186	1.48438687960385	0.000248203934063852	Up	4.76419555456057e-05	GO:0016021//integral component of membrane	GO:0015171//amino acid transmembrane transporter activity	GO:0003333//amino acid transmembrane transport	K14992;K14993//solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 6;K14207//solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 2	gi|697114828|ref|XP_009611335.1|//PREDICTED: probable sodium-coupled neutral amino acid transporter 6 [Nicotiana tomentosiformis];gi|460380325|ref|XP_004235907.1|//PREDICTED: probable sodium-coupled neutral amino acid transporter 6 [Solanum lycopersicum]
Solyc01g109660.2.1	962	6028.09417631313	15547.4349438443	1.36690271911232	0.000312201889780543	Up	6.1281316221274e-05	NA	GO:0005488//binding	NA	K13195//cold-inducible RNA-binding protein;K13098//RNA-binding protein FUS	gi|992319561|ref|NP_001307045.1|//glycine-rich RNA-binding protein [Solanum lycopersicum]
Solyc08g083360.3.1	739	11615.3439453791	768.023700684998	-3.91873723240926	5.15832747509488e-10	Down	3.49938720913697e-11	NA	GO:0005488//binding	NA	NA	gi|460399831|ref|XP_004245440.1|//PREDICTED: uncharacterized protein LOC101258885 [Solanum lycopersicum]
Solyc03g025640.2.1	3827	14.6678995851958	149.850560479231	3.35279028012882	6.47224571982903e-07	Up	7.27367707070393e-08	NA	GO:0005506//iron ion binding;GO:0016491//oxidoreductase activity	NA	K07426//cytochrome P450, family 4, subfamily B, polypeptide 1 [EC:1.14.14.1];K20661;K20660//null	gi|723679660|ref|XP_010317607.1|//PREDICTED: cytokinin hydroxylase [Solanum lycopersicum]
Solyc08g067960.3.1	2595	2611.11293448113	1140.08189830435	-1.19552739291574	0.0070705301201541	Down	0.00197979060170708	NA	GO:0046914//transition metal ion binding;GO:0008270//zinc ion binding	NA	K10144//RING finger and CHY zinc finger domain-containing protein 1 [EC:2.3.2.27]	gi|460399435|ref|XP_004245246.1|//PREDICTED: RING finger and CHY zinc finger domain-containing protein 1 [Solanum lycopersicum]
Solyc03g113330.3.1	2323	274.034634114311	132.252879392019	-1.05105910817777	0.00851781183911993	Down	0.00243710763668871	NA	NA	NA	K14794//ribosomal RNA-processing protein 12	gi|460380886|ref|XP_004236184.1|//PREDICTED: uncharacterized protein LOC101244171 [Solanum lycopersicum]
Solyc04g015440.3.1	4113	1949.036667793	143.6949569816	-3.76167989671873	9.00242008144939e-18	Down	2.11738745765415e-19	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial	gi|460382776|ref|XP_004237112.1|//PREDICTED: pentatricopeptide repeat-containing protein At4g31850, chloroplastic [Solanum lycopersicum]
Solyc05g013640.1.1	342	1098.17522709188	2793.67935188094	1.34705817099104	0.0166672834754571	Up	0.00520681760875972	NA	NA	NA	NA	NA
Solyc02g085700.1.1	1083	1225.18727534443	489.248223220914	-1.32436377185236	0.00167596492519719	Down	0.00039200387302864	GO:0009536//plastid	GO:0004659//prenyltransferase activity;GO:0043169//cation binding	GO:0016109//tetraterpenoid biosynthetic process	K13789//geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]	gi|807201120|ref|NP_001234268.2|//geranylgeranyl pyrophosphate synthetase-like protein [Solanum lycopersicum]
Solyc01g066730.3.1	2628	10.7598578860703	0.398911419645762	-4.7534467889057	0.00167943176550539	Down	0.000393065157880139	NA	NA	NA	K12412//pheromone receptor transcription factor	gi|723658235|ref|XP_010321380.1|//PREDICTED: fibrinogen alpha-1 chain-like [Solanum lycopersicum]
Solyc04g072343.1.1	1661	0.381680580160642	4.30533743078712	3.49568862379685	0.042921471397908	Up	0.0156291133733293	NA	NA	NA	NA	gi|723696537|ref|XP_010320509.1|//PREDICTED: uncharacterized protein LOC104647230 [Solanum lycopersicum]
Solyc08g082210.3.1	1679	199.493505891164	3508.68748537334	4.13651776603216	2.40975781638104e-13	Up	9.7906516320834e-15	NA	NA	NA	K09286//EREBP-like factor	gi|460399992|ref|XP_004245520.1|//PREDICTED: ethylene-responsive transcription factor ERF061-like [Solanum lycopersicum]
Solyc09g097910.3.1	1623	3944.5517521408	303.486994362436	-3.7001547680756	7.95085341619206e-18	Down	1.85818132694954e-19	NA	GO:0003676//nucleic acid binding	NA	K02945//small subunit ribosomal protein S1	gi|460405109|ref|XP_004248019.1|//PREDICTED: uncharacterized protein LOC101267163 isoform X1 [Solanum lycopersicum]
Solyc02g090260.2.1	5080	1442.37152790817	187.018223542255	-2.94719206165268	3.10767314666194e-29	Down	2.37465705630572e-31	NA	NA	NA	K15271//ATP-dependent DNA helicase HFM1/MER3 [EC:3.6.4.12];K01176//alpha-amylase [EC:3.2.1.1];K07409//cytochrome P450, family 1, subfamily A, polypeptide 2 [EC:1.14.14.1];K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30]	gi|723670455|ref|XP_010316159.1|//PREDICTED: uncharacterized protein LOC101255955 [Solanum lycopersicum];gi|723670473|ref|XP_004233642.2|//PREDICTED: pentatricopeptide repeat-containing protein At3g50420 isoform X1 [Solanum lycopersicum]
Solyc07g061730.3.1	1275	7.48818330196379	66.8391760511722	3.1580062929731	0.00155103852887252	Up	0.000360355716060176	NA	GO:0046914//transition metal ion binding;GO:0003824//catalytic activity	GO:0008152//metabolic process	K04125//gibberellin 2-oxidase [EC:1.14.11.13]	gi|350536409|ref|NP_001234757.1|//gibberellin 2-oxidase [Solanum lycopersicum]
Solyc11g019910.1.1	591	730.360275715614	74.9415407370736	-3.28477075557425	0.000159009460458867	Down	2.92675084145625e-05	NA	NA	NA	K01051//pectinesterase [EC:3.1.1.11]	gi|460409959|ref|XP_004250403.1|//PREDICTED: 21 kDa protein-like [Solanum lycopersicum]
Solyc08g075880.3.1	793	207.987698514446	833.209281276704	2.00218070759964	1.46172297650501e-05	Up	2.15106691189868e-06	NA	GO:0043169//cation binding	GO:0006812//cation transport	K07213//copper chaperone;K10752//histone-binding protein RBBP4	gi|460400942|ref|XP_004245990.1|//PREDICTED: uncharacterized protein LOC101245684 [Solanum lycopersicum]
Solyc07g041280.3.1	1420	29.5482665276515	73.8921243066891	1.32234710879915	0.0107243211768129	Up	0.00316077260865735	GO:0009536//plastid	GO:0016787//hydrolase activity;GO:0046914//transition metal ion binding	GO:0008152//metabolic process	K13566//omega-amidase [EC:3.5.1.3]	gi|460396323|ref|XP_004243725.1|//PREDICTED: omega-amidase,chloroplastic-like [Solanum lycopersicum]
Solyc09g098380.2.1	1954	1.82633391310945	117.43142239465	6.0067241264704	2.56108858335849e-14	Up	9.11674219884954e-16	NA	NA	NA	K15015//solute carrier family 32 (vesicular inhibitory amino acid transporter)	gi|460405045|ref|XP_004247988.1|//PREDICTED: vacuolar amino acid transporter 1 [Solanum lycopersicum]
Solyc04g009260.2.1	2537	183.439615398212	42.8955312177202	-2.09640597207137	0.000292353287805426	Down	5.69844311626059e-05	NA	NA	NA	K13457//disease resistance protein RPM1	gi|723689773|ref|XP_004237168.2|//PREDICTED: disease resistance protein RPP13-like isoform X1 [Solanum lycopersicum]
Solyc01g008500.3.1	3173	21.3615661857566	218.106469622829	3.35194323339142	6.66387383626779e-07	Up	7.50890510177335e-08	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|723655290|ref|XP_010315122.1|//PREDICTED: probable receptor-like protein kinase At1g67000 [Solanum lycopersicum]
Solyc10g081110.2.1	1504	205.238802897041	66.2823425083413	-1.63060702043035	0.000584530332619584	Down	0.000122662062338369	NA	NA	NA	K13148//integrator complex subunit 11 [EC:3.1.27.-]	gi|723738731|ref|XP_010312169.1|//PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform X1 [Solanum lycopersicum];gi|460407800|ref|XP_004249338.1|//PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform X2 [Solanum lycopersicum]
Solyc09g007340.3.1	2423	51.5348976422653	159.568055257965	1.63055024870177	4.85174652257453e-06	Up	6.46706633544302e-07	NA	NA	NA	K17398//DNA (cytosine-5)-methyltransferase 3A [EC:2.1.1.37]	gi|460402388|ref|XP_004246694.1|//PREDICTED: uncharacterized protein LOC101257296 [Solanum lycopersicum]
Solyc01g105620.3.1	1778	12.1933869092035	1150.41224555361	6.55990821414178	1.81617683165896e-54	Up	1.55703247085716e-57	NA	NA	NA	K19041//E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27]	gi|723664592|ref|XP_004230630.2|//PREDICTED: RING-H2 finger protein ATL54-like [Solanum lycopersicum]
Solyc02g086910.3.1	5545	2793.18354556503	1076.31945014439	-1.37580404768135	0.00534556309944953	Down	0.0014409986706135	NA	NA	NA	NA	gi|460372959|ref|XP_004232290.1|//PREDICTED: peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic [Solanum lycopersicum]
Solyc05g047540.3.1	4461	1877.44856263769	382.439476435553	-2.29547002707435	5.73387084500259e-22	Down	8.74143870436134e-24	NA	GO:0004672//protein kinase activity	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K17609//nucleoredoxin [EC:1.8.1.8]	gi|723702703|ref|XP_004240282.2|//PREDICTED: pentatricopeptide repeat-containing protein At3g42630 [Solanum lycopersicum]
Solyc09g091670.3.1	4620	71.0739780699987	2282.63980448738	5.00523796280319	9.98025196232118e-12	Up	5.1300012882216e-13	GO:0031224//intrinsic component of membrane	GO:0032559//adenyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity	GO:0006950//response to stress;GO:0051234//establishment of localization;GO:0009207//purine ribonucleoside triphosphate catabolic process	K05681//ATP-binding cassette, subfamily G (WHITE), member 2	gi|460404747|ref|XP_004247842.1|//PREDICTED: pleiotropic drug resistance protein 1 [Solanum lycopersicum]
Solyc12g008930.2.1	1649	1.12945501576872	75.2252548187561	6.05751837161551	1.04748047143613e-10	Up	6.32908097583853e-12	NA	NA	NA	K13422//transcription factor MYC2	gi|723747730|ref|XP_004251673.2|//PREDICTED: putative transcription factor bHLH041 [Solanum lycopersicum]
Solyc02g089160.3.1	2160	244.951674836103	1134.96124644498	2.21207397607859	1.48241752986343e-06	Up	1.79859440126191e-07	GO:0031224//intrinsic component of membrane	GO:0005506//iron ion binding;GO:0016491//oxidoreductase activity	GO:0016129//phytosteroid biosynthetic process	K12640//brassinosteroid-6-oxidase 2 [EC:1.14.-.-]	gi|350536757|ref|NP_001234263.1|//cytochrome P450 85A1 [Solanum lycopersicum]
Solyc09g092605.1.1	763	22.9285390504644	3.93610733107955	-2.54230296669119	0.0160333500586863	Down	0.0049902517142549	NA	NA	NA	K00517;K20617//null;K11818//cytochrome P450, family 83, subfamily B, polypeptide 1 [EC:1.14.-.-]	gi|565385850|ref|XP_006358770.1|//PREDICTED: cytochrome P450 83B1-like [Solanum tuberosum]
Solyc08g006060.3.1	2562	542.381309339025	1323.93883459492	1.28745710315638	1.43169501485057e-05	Up	2.09994031736879e-06	GO:0043234//protein complex	GO:0043169//cation binding;GO:0004721//phosphoprotein phosphatase activity	GO:0006464//cellular protein modification process	K17499//protein phosphatase 1G [EC:3.1.3.16]	gi|460397817|ref|XP_004244463.1|//PREDICTED: probable protein phosphatase 2C 21 [Solanum lycopersicum]
Solyc06g051030.3.1	3066	1118.58057720872	4186.35014374992	1.9040237977567	2.14230787730997e-05	Up	3.26919951159499e-06	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460390590|ref|XP_004240911.1|//PREDICTED: inactive receptor-like serine/threonine-protein kinase At2g40270 [Solanum lycopersicum]
BGI_novel_G000439	840	604.003094417182	3049.76675572174	2.33607106459891	0.0424506795654141	Up	0.015429274505828	NA	NA	NA	K02950//small subunit ribosomal protein S12	gi|763809786|gb|KJB76688.1|//hypothetical protein B456_012G100900 [Gossypium raimondii]
Solyc01g106570.3.1	1746	742.713570024792	355.173409930724	-1.06428235952988	0.000106833957224418	Down	1.8779966537586e-05	GO:0016021//integral component of membrane	NA	NA	K16302//metal transporter CNNM	gi|747081497|ref|XP_011088024.1|//PREDICTED: DUF21 domain-containing protein At2g14520-like [Sesamum indicum];gi|723664850|ref|XP_010315165.1|//PREDICTED: DUF21 domain-containing protein At4g33700-like [Solanum lycopersicum]
Solyc06g076880.3.1	1140	176.308059820686	370.563864819372	1.07162377706528	0.0137844073668383	Up	0.00420079527581048	NA	GO:0000166//nucleotide binding;GO:0003824//catalytic activity	NA	K03809//NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]	gi|460391116|ref|XP_004241169.1|//PREDICTED: flavoprotein-like protein YCP4 [Solanum lycopersicum]
Solyc11g027690.1.1	696	1118.81465113921	5976.45045008669	2.41731783788228	0.0272114694112761	Up	0.0092057289539564	NA	NA	NA	K01191//alpha-mannosidase [EC:3.2.1.24]	gi|253760055|ref|XP_002488965.1|//hypothetical protein SORBIDRAFT_1138s002030 [Sorghum bicolor];gi|947068948|gb|KRH17839.1|//hypothetical protein GLYMA_13G020400 [Glycine max]
Solyc07g043050.1.1	1431	828.666590685076	202.387542669391	-2.03367126607858	0.000102984646588566	Down	1.80342131233444e-05	NA	NA	NA	K08237//hydroquinone glucosyltransferase [EC:2.4.1.218]	gi|460396179|ref|XP_004243656.1|//PREDICTED: anthocyanidin 3-O-glucosyltransferase 2-like [Solanum lycopersicum]
Solyc02g088345.1.1	1517	511.155027682867	2368.64058167065	2.2122264840109	0.000332998823987519	Up	6.57855139083738e-05	NA	NA	NA	K08819//cyclin-dependent kinase 12/13 [EC:2.7.11.22 2.7.11.23];K13424//WRKY transcription factor 33	gi|460372768|ref|XP_004232197.1|//PREDICTED: probable WRKY transcription factor 3 [Solanum lycopersicum]
Solyc02g086500.3.1	8723	528.403524576069	260.572571648323	-1.01995485858779	0.0208924419538402	Down	0.006773611902285	NA	NA	NA	K13192//RNA-binding protein 26	gi|723671813|ref|XP_010316298.1|//PREDICTED: protein RST1 isoform X2 [Solanum lycopersicum]
Solyc01g066720.3.1	812	859.8268892285	5214.76345046652	2.60048367809666	1.19714699797262e-24	Up	1.40116355063144e-26	GO:0016020//membrane	NA	NA	NA	gi|460366762|ref|XP_004229248.1|//PREDICTED: uncharacterized protein LOC101256324 [Solanum lycopersicum]
Solyc02g092470.3.1	9190	785.93307132403	274.456600677086	-1.51782842382273	0.00946166030379563	Down	0.0027501873806843	NA	NA	NA	K17800//LETM1 and EF-hand domain-containing protein 1, mitochondrial;K19984//exocyst complex component 5;K02184//formin 2	gi|460372193|ref|XP_004231916.1|//PREDICTED: formin-like protein 6 [Solanum lycopersicum]
Solyc05g007090.3.1	1566	775.354130275856	48.6893341935618	-3.99317771059727	1.79622891632881e-13	Down	7.17741687156883e-15	NA	GO:0008270//zinc ion binding;GO:0003676//nucleic acid binding	NA	K09228//KRAB domain-containing zinc finger protein	gi|460386169|ref|XP_004238772.1|//PREDICTED: uncharacterized protein LOC101258258 [Solanum lycopersicum]
Solyc01g095140.3.1	590	1171.04420890502	47674.2852693244	5.34734386371845	2.62688368726207e-19	Up	5.258075667436e-21	NA	NA	GO:0009414//response to water deprivation;GO:0009269//response to desiccation	NA	gi|350535092|ref|NP_001234431.1|//late embryogenesis (Lea)-like protein [Solanum lycopersicum];gi|350535431|ref|NP_001233938.1|//ethylene-responsive late embryogenesis-like protein [Solanum lycopersicum]
Solyc09g007310.3.1	8539	615.44055463299	182.915146825058	-1.75044496698369	0.000146035657183311	Down	2.65801444023448e-05	GO:0005634//nucleus;GO:0005737//cytoplasm	GO:0004842//ubiquitin-protein transferase activity;GO:0016874//ligase activity	GO:0042787//protein ubiquitination involved in ubiquitin-dependent protein catabolic process	K10590//E3 ubiquitin-protein ligase TRIP12 [EC:2.3.2.26]	gi|460402392|ref|XP_004246696.1|//PREDICTED: E3 ubiquitin-protein ligase UPL4 [Solanum lycopersicum]
Solyc11g069350.2.1	3957	470.714717354086	1415.01816232936	1.58789570463873	1.44476439562086e-06	Up	1.74752514678309e-07	NA	NA	NA	K15407//queuine tRNA-ribosyltransferase subunit QTRTD1 [EC:2.4.2.29];K10661//E3 ubiquitin-protein ligase MARCH6 [EC:2.3.2.27];K19612//2',5'-phosphodiesterase [EC:3.1.13.4 3.1.4.-]	gi|460411457|ref|XP_004251127.1|//PREDICTED: uncharacterized protein LOC101256453 [Solanum lycopersicum]
Solyc10g055230.1.1	555	20.1640695331682	122.251082312044	2.59998849816005	2.33446962252383e-05	Up	3.58941672614836e-06	NA	NA	NA	K01870//isoleucyl-tRNA synthetase [EC:6.1.1.5];K19027//zinc finger FYVE domain-containing protein 26;K14440//SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:3.6.4.12]	gi|460406419|ref|XP_004248662.1|//PREDICTED: dirigent protein 22-like [Solanum lycopersicum]
Solyc04g074430.1.1	399	245.212061719452	895.876218990439	1.86926946703113	1.35473071332539e-09	Up	9.78124866449707e-11	NA	NA	NA	NA	gi|723754798|ref|XP_004253500.2|//PREDICTED: protein EXORDIUM-like [Solanum lycopersicum]
Solyc12g099290.2.1	2379	1648.09600462034	339.393330755029	-2.2797701639973	0.00572860860922467	Down	0.00155963013574538	NA	GO:0004030//aldehyde dehydrogenase [NAD(P)+] activity	GO:0008152//metabolic process	K00130//betaine-aldehyde dehydrogenase [EC:1.2.1.8];K00128//aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]	gi|460415150|ref|XP_004252923.1|//PREDICTED: aldehyde dehydrogenase 22A1 [Solanum lycopersicum]
Solyc10g078220.2.1	1763	57.670722864786	1683.17025129923	4.86719819550401	5.18141739836242e-14	Up	1.92941552891161e-15	NA	NA	NA	K09754//coumaroylquinate(coumaroylshikimate) 3'-monooxygenase [EC:1.14.13.36]	gi|460407347|ref|XP_004249114.1|//PREDICTED: cytochrome P450 98A3-like [Solanum lycopersicum]
Solyc07g043310.3.1	2199	1707.12250285233	17218.8580435476	3.3343509714518	1.07391277683586e-14	Up	3.61066544172485e-16	NA	GO:0008483//transaminase activity;GO:0048037//cofactor binding	NA	K16871//4-aminobutyrate---pyruvate transaminase [EC:2.6.1.96]	gi|894216246|ref|NP_001234336.2|//gamma aminobutyrate transaminase 1, mitochondrial [Solanum lycopersicum];gi|971569389|ref|XP_015169135.1|//PREDICTED: gamma aminobutyrate transaminase 1, mitochondrial isoform X2 [Solanum tuberosum]
Solyc03g123430.3.1	1290	2.11559472975108	23.4773665150279	3.47213539700348	0.000386583427206624	Up	7.7423317220113e-05	NA	NA	NA	K09285//AP2-like factor, ANT lineage	gi|723684729|ref|XP_010318466.1|//PREDICTED: AP2-like ethylene-responsive transcription factor AIL1 isoform X1 [Solanum lycopersicum]
Solyc05g021540.2.1	3162	158.849631734853	48.2421392314567	-1.71929595731789	0.0427257283155585	Down	0.0155403927576867	NA	GO:0016301//kinase activity	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K18857//alcohol dehydrogenase class-P [EC:1.1.1.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|586724498|ref|XP_006849439.1|//PREDICTED: probable receptor-like protein kinase At4g39110 [Amborella trichopoda];gi|565380079|ref|XP_006356443.1|//PREDICTED: receptor-like protein kinase HERK 1 [Solanum tuberosum];gi|113365|sp|P14673.1|ADH1_SOLTU//RecName: Full=Alcohol dehydrogenase 1
Solyc02g076750.2.1	2593	343.733392390111	70.9524449509048	-2.2763657067519	0.0034109560192046	Down	0.000869394560135719	NA	NA	NA	K16290//xylem cysteine proteinase [EC:3.4.22.-]	gi|723678254|ref|XP_010317333.1|//PREDICTED: xylem cysteine proteinase 2-like, partial [Solanum lycopersicum]
Solyc09g066080.2.1	4451	250.884684771659	114.569196196949	-1.13080520020992	0.0310841367896352	Down	0.0107377810702683	NA	NA	NA	K10683//BRCA1-associated RING domain protein 1	gi|723731085|ref|XP_004247224.2|//PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Solanum lycopersicum]
Solyc05g052320.3.1	2549	9.53079932558754	0.719592308683717	-3.72734554299772	0.00703740199215793	Down	0.00196830473555592	NA	NA	NA	NA	gi|460388614|ref|XP_004239962.1|//PREDICTED: cation/H(+) antiporter 3-like [Solanum lycopersicum]
Solyc11g066800.2.1	1985	32.8083119269859	442.434585871772	3.75333089746616	7.86198427696809e-11	Up	4.67124009895897e-12	GO:0031224//intrinsic component of membrane	NA	NA	K14209//solute carrier family 36 (proton-coupled amino acid transporter);K15015//solute carrier family 32 (vesicular inhibitory amino acid transporter)	gi|460411213|ref|XP_004251008.1|//PREDICTED: GABA transporter 1 [Solanum lycopersicum]
Solyc08g082820.3.1	2490	1307.01187565454	20518.1061116759	3.97255341682566	2.51220283424233e-21	Up	4.04529455938827e-23	GO:0044432//endoplasmic reticulum part	GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	GO:0008152//metabolic process;GO:0050896//response to stimulus	K09490//heat shock 70kDa protein 5	gi|910242123|ref|NP_001234636.2|//luminal-binding protein precursor [Solanum lycopersicum];gi|698515700|ref|XP_009802727.1|//PREDICTED: luminal-binding protein [Nicotiana sylvestris]
Solyc08g075650.3.1	2328	997.302262546564	362.802891701656	-1.45884486832855	4.03041954494996e-05	Down	6.47499188859934e-06	NA	NA	NA	K05740;K02184//formin 2	gi|460401382|ref|XP_004246204.1|//PREDICTED: formin-like protein 14 [Solanum lycopersicum]
Solyc03g120630.3.1	780	10594.7101699433	3289.41059962703	-1.68744311325184	0.000201582208835687	Down	3.79676047877862e-05	NA	NA	NA	K02961//small subunit ribosomal protein S17	gi|460379854|ref|XP_004235675.1|//PREDICTED: 30S ribosomal protein S17, chloroplastic [Solanum lycopersicum]
Solyc07g042905.1.1	2044	969.042367249865	406.061831496727	-1.25486031776302	0.0138725541393696	Down	0.00422950638589231	NA	NA	GO:0006810//transport	K03136//transcription initiation factor TFIIE subunit alpha;K15813//beta-amyrin synthase [EC:5.4.99.39];K01623//fructose-bisphosphate aldolase, class I [EC:4.1.2.13];K08202//MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 4/5	gi|723716550|ref|XP_010323959.1|//PREDICTED: organic cation/carnitine transporter 7 [Solanum lycopersicum]
Solyc10g079233.1.1	1084	37.0437713369052	0.966398060055408	-5.26046961454407	4.60213592620365e-05	Down	7.45865774829785e-06	NA	NA	NA	NA	gi|460408610|ref|XP_004249736.1|//PREDICTED: UPF0481 protein At3g47200 [Solanum lycopersicum]
Solyc01g081040.3.1	810	40.5939541760878	5.12885835634224	-2.98455524285037	0.000341896114779359	Down	6.77216323966571e-05	NA	NA	NA	K19041//E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27]	gi|460367311|ref|XP_004229518.1|//PREDICTED: RING-H2 finger protein ATL51 [Solanum lycopersicum]
Solyc08g067030.3.1	1569	3984.25228979606	614.944166937218	-2.69578167038738	2.33783427800529e-06	Down	2.94015687117558e-07	NA	NA	NA	K03097//casein kinase II subunit alpha [EC:2.7.11.1]	gi|460399325|ref|XP_004245192.1|//PREDICTED: uncharacterized protein LOC101262737 [Solanum lycopersicum]
Solyc12g042830.2.1	1043	12.7449931328236	1.48287695679123	-3.10345979721897	0.0185980423469598	Down	0.00591604642123733	NA	NA	NA	K13993//HSP20 family protein	gi|460413912|ref|XP_004252319.1|//PREDICTED: 26.5 kDa heat shock protein, mitochondrial [Solanum lycopersicum]
Solyc04g014310.1.1	204	11.0232497893575	0.479641815156558	-4.52244836226205	0.00400553334457663	Down	0.00104259129809075	NA	NA	NA	NA	gi|723689238|ref|XP_010319239.1|//PREDICTED: RNA-binding protein 12-like [Solanum lycopersicum]
Solyc05g009360.3.1	1854	1439.10190868772	4709.90903639196	1.71053043816242	3.0336515181414e-05	Up	4.76170662848272e-06	NA	NA	NA	NA	gi|460386488|ref|XP_004238930.1|//PREDICTED: uncharacterized protein LOC101254996 [Solanum lycopersicum]
Solyc04g006930.3.1	3441	61.7154289888261	16.3800757459823	-1.91368918288966	0.0205073736124976	Down	0.00662812869367702	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|723690522|ref|XP_010319435.1|//PREDICTED: proline-rich receptor-like protein kinase PERK9 isoform X2 [Solanum lycopersicum];gi|460382965|ref|XP_004237206.1|//PREDICTED: proline-rich receptor-like protein kinase PERK9 isoform X1 [Solanum lycopersicum]
Solyc06g076170.3.1	3326	25.7547077642762	228.299279916314	3.14801823396316	8.39930414908077e-06	Up	1.1815630631665e-06	NA	GO:0008422//beta-glucosidase activity;GO:0043167//ion binding	GO:0044238//primary metabolic process	K20617;K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30];K19891//glucan endo-1,3-beta-glucosidase 1/2/3 [EC:3.2.1.39]	gi|460391228|ref|XP_004241225.1|//PREDICTED: glucan endo-1,3-beta-glucosidase-like [Solanum lycopersicum];gi|460391230|ref|XP_004241226.1|//PREDICTED: cytochrome P450 71A9-like [Solanum lycopersicum]
Solyc06g066340.3.1	1825	697.199877546138	174.023114540054	-2.0022933719676	4.8597578682126e-05	Down	7.91784763752694e-06	NA	NA	NA	K06236//collagen, type I, alpha;K14491//two-component response regulator ARR-B family;K14317//nuclear pore complex protein Nup214	gi|460392303|ref|XP_004241756.1|//PREDICTED: probable transcription factor KAN2 isoform X1 [Solanum lycopersicum];gi|723709386|ref|XP_010322703.1|//PREDICTED: probable transcription factor KAN2 isoform X2 [Solanum lycopersicum]
Solyc01g097040.3.1	3272	210.93106894991	1345.6313983707	2.67343975761803	2.40107910237888e-06	Up	3.03222603207829e-07	NA	NA	NA	K06268//serine/threonine-protein phosphatase 2B regulatory subunit;K11844//ubiquitin carboxyl-terminal hydrolase 16/45 [EC:3.4.19.12];K13407//fatty acid omega-hydroxylase [EC:1.14.-.-]	gi|460368445|ref|XP_004230077.1|//PREDICTED: uncharacterized protein LOC101255631 isoform X1 [Solanum lycopersicum];gi|723661901|ref|XP_010327558.1|//PREDICTED: uncharacterized protein LOC101255631 isoform X2 [Solanum lycopersicum]
Solyc11g072930.2.1	4819	1.65654380608279	1091.93795748288	9.36449881623006	9.2748799778907e-37	Up	3.90659548792921e-39	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460412127|ref|XP_004251454.1|//PREDICTED: putative leucine-rich repeat receptor-like protein kinase At2g19210 [Solanum lycopersicum]
Solyc02g087050.2.1	1760	92.2870293545227	21.4751010393993	-2.10346297676987	0.0220717298146083	Down	0.00722341537842034	NA	NA	NA	K07874//Ras-related protein Rab-1A;K00801//farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]	gi|460372945|ref|XP_004232283.1|//PREDICTED: WAT1-related protein At5g40240-like [Solanum lycopersicum]
Solyc02g084720.3.1	4979	1923.23085451175	587.44931184693	-1.71099566759349	0.000941651027417252	Down	0.000208372055104354	NA	GO:0030246//carbohydrate binding;GO:0015925//galactosidase activity;GO:0043167//ion binding	GO:0044238//primary metabolic process	K12309//beta-galactosidase [EC:3.2.1.23]	gi|350537913|ref|NP_001234317.1|//TBG6 protein precursor [Solanum lycopersicum]
Solyc11g008990.2.1	1742	4553.88922041199	1403.75259491223	-1.6978105068422	3.17166752430635e-11	Down	1.77569875559421e-12	NA	NA	NA	K03969//phage shock protein A	gi|970063344|ref|XP_015058599.1|//PREDICTED: membrane-associated protein VIPP1, chloroplastic [Solanum pennellii];gi|460409347|ref|XP_004250100.1|//PREDICTED: membrane-associated protein VIPP1, chloroplastic [Solanum lycopersicum]
Solyc03g117640.1.1	1218	168.355369660445	408.228083129139	1.27786569636629	1.2581356980855e-05	Up	1.81723416955468e-06	NA	NA	NA	K20716	gi|460380290|ref|XP_004235890.1|//PREDICTED: mitogen-activated protein kinase kinase kinase YODA-like [Solanum lycopersicum]
Solyc01g008140.3.1	3042	613.737393809435	2132.35871665393	1.79675676446792	0.000484737239868869	Up	9.94478856823724e-05	GO:0016020//membrane	GO:0000166//nucleotide binding;GO:0004672//protein kinase activity;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K13415//protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1]	gi|460365292|ref|XP_004228537.1|//PREDICTED: phytosulfokine receptor 1 [Solanum lycopersicum]
Solyc02g084620.3.1	2695	600.033634863161	282.203917955201	-1.08830535559109	0.00691745420567447	Down	0.00192945094010221	NA	NA	NA	K11674//microspherule protein 1	gi|460373291|ref|XP_004232454.1|//PREDICTED: uncharacterized protein LOC101248257 [Solanum lycopersicum]
Solyc03g119940.3.1	9502	751.474255507916	170.58138839519	-2.13926343293316	4.91519728678271e-06	Down	6.56813115890712e-07	NA	NA	NA	K01176//alpha-amylase [EC:3.2.1.1]	gi|460379957|ref|XP_004235725.1|//PREDICTED: pentatricopeptide repeat-containing protein At1g15510, chloroplastic [Solanum lycopersicum]
Solyc01g088310.3.1	2532	284.668214156147	695.243988451899	1.28823795330847	0.00344761595370289	Up	0.0008795096014292	NA	GO:0016627//oxidoreductase activity, acting on the CH-CH group of donors	GO:0006779//porphyrin-containing compound biosynthetic process	K10960//geranylgeranyl reductase [EC:1.3.1.83]	gi|460367663|ref|XP_004229690.1|//PREDICTED: geranylgeranyl diphosphate reductase, chloroplastic-like [Solanum lycopersicum]
Solyc12g042110.2.1	1091	2856.43737129261	101.59372671279	-4.81333367317894	2.13420603886251e-30	Down	1.53534279670667e-32	NA	NA	NA	K07466//replication factor A1;K12819//pre-mRNA-processing factor SLU7;K17790//mitochondrial import inner membrane translocase subunit TIM22	gi|970045593|ref|XP_015084256.1|//PREDICTED: uncharacterized protein LOC107027670 [Solanum pennellii];gi|723750607|ref|XP_010314233.1|//PREDICTED: uncharacterized protein LOC101250282 [Solanum lycopersicum];gi|971587613|ref|XP_015161150.1|//PREDICTED: replication protein A 70 kDa DNA-binding subunit D-like [Solanum tuberosum]
Solyc11g065990.2.1	1389	43.6912982826142	94.7853054877704	1.1173174403038	0.0384107635893498	Up	0.0136946083842303	GO:0043232//intracellular non-membrane-bounded organelle	GO:0032559//adenyl ribonucleotide binding	NA	K10355//actin, other eukaryote	gi|460411105|ref|XP_004250955.1|//PREDICTED: actin-97-like [Solanum lycopersicum]
Solyc03g026060.3.1	2640	419.635571577527	1000.22228056734	1.25311176516352	0.000687714835454429	Up	0.000146627734411784	NA	GO:0046914//transition metal ion binding	NA	K19044//E3 ubiquitin-protein ligase XBAT32/33 [EC:2.3.2.27]	gi|460377173|ref|XP_004234369.1|//PREDICTED: E3 ubiquitin-protein ligase XBAT33 [Solanum lycopersicum]
Solyc01g093965.1.1	845	557.544830359433	81.3246216614531	-2.77732370140847	3.78979136356246e-20	Down	6.96424311255515e-22	NA	NA	NA	K09260//MADS-box transcription enhancer factor 2A	gi|969996762|ref|XP_015064668.1|//PREDICTED: MADS-box protein SOC1 [Solanum pennellii]
Solyc08g079490.3.1	1373	833.852019745301	356.493682860631	-1.22591486523755	0.000125605273602475	Down	2.24963970351831e-05	NA	NA	NA	K15033//peptidyl-tRNA hydrolase ICT1 [EC:3.1.1.29]	gi|460400375|ref|XP_004245710.1|//PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial isoform X1 [Solanum lycopersicum];gi|460400377|ref|XP_004245711.1|//PREDICTED: peptidyl-tRNA hydrolase ICT1, mitochondrial isoform X2 [Solanum lycopersicum]
Solyc03g113670.3.1	618	240.219888476429	78.6878477783913	-1.61014284647684	0.00104418846657265	Down	0.000232906805724271	NA	NA	NA	NA	gi|595851982|ref|XP_007210222.1|//hypothetical protein PRUPE_ppa015613mg, partial [Prunus persica]
Solyc04g064860.1.1	702	66.3800417636851	221.172203547347	1.73634863990208	5.38438730807723e-08	Up	4.99944415700774e-09	NA	NA	NA	K12412//pheromone receptor transcription factor;K09260//MADS-box transcription enhancer factor 2A;K04454//MADS-box transcription enhancer factor 2C	gi|460384122|ref|XP_004237763.1|//PREDICTED: agamous-like MADS-box protein AGL62 [Solanum lycopersicum]
Solyc10g050060.2.1	1418	1207.33779466748	6621.43541891456	2.45531462702982	1.53557905360937e-11	Up	8.13350915155405e-13	NA	NA	NA	K13412//calcium-dependent protein kinase [EC:2.7.11.1]	gi|460406619|ref|XP_004248759.1|//PREDICTED: elicitor-responsive protein 1 [Solanum lycopersicum]
Solyc01g094790.3.1	1963	938.05964385248	213.377915474263	-2.1362687897641	0.00055644623154273	Down	0.000116097505994456	NA	GO:0048037//cofactor binding;GO:0016835//carbon-oxygen lyase activity	GO:0000097//sulfur amino acid biosynthetic process;GO:0006563//L-serine metabolic process	K13034//L-3-cyanoalanine synthase/ cysteine synthase [EC:2.5.1.47 4.4.1.9]	gi|460368103|ref|XP_004229909.1|//PREDICTED: bifunctional L-3-cyanoalanine synthase/cysteine synthase 2, mitochondrial [Solanum lycopersicum]
Solyc04g079140.3.1	2016	303.27507056188	123.194864169846	-1.29968479897459	0.000241814696097303	Down	4.62123135116621e-05	NA	NA	NA	K15891//farnesol dehydrogenase [EC:1.1.1.216]	gi|460384945|ref|XP_004238167.1|//PREDICTED: uncharacterized protein LOC101257658 [Solanum lycopersicum]
Solyc06g050300.2.1	1688	118.109970647307	738.302829727183	2.64408192821922	2.08619546184755e-10	Up	1.32661751077677e-11	NA	GO:0000166//nucleotide binding;GO:0004672//protein kinase activity	GO:0009987//cellular process	K07198//5'-AMP-activated protein kinase, catalytic alpha subunit [EC:2.7.11.11]	gi|460390519|ref|XP_004240878.1|//PREDICTED: CBL-interacting protein kinase 18-like [Solanum lycopersicum]
Solyc09g005710.2.1	1386	34.0549745364387	86.0442661679709	1.3372135034719	0.00890533516164633	Up	0.00256129098893795	NA	NA	NA	K15271//ATP-dependent DNA helicase HFM1/MER3 [EC:3.6.4.12]	gi|723728676|ref|XP_010326051.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g42450, mitochondrial [Solanum lycopersicum]
Solyc12g042117.1.1	1364	136.541433535322	15.9238847052745	-3.10007456773142	5.76401379713679e-08	Down	5.38200930439379e-09	NA	NA	NA	NA	gi|565396433|ref|XP_006363826.1|//PREDICTED: uncharacterized protein LOC102592988 [Solanum tuberosum]
Solyc12g006810.2.1	1477	1880.62747081843	32.5200166295934	-5.85374229162907	1.20557767054693e-72	Down	3.59498336229888e-76	NA	NA	NA	K13201//nucleolysin TIA-1/TIAR	gi|460412388|ref|XP_004251583.1|//PREDICTED: uncharacterized protein LOC101267969 isoform X1 [Solanum lycopersicum]
BGI_novel_G000333	659	2528.99098851647	16832.3266252175	2.73460080358289	0.0194882571089245	Up	0.00624046702204549	NA	NA	NA	NA	gi|543177598|gb|AGV54820.1|//cell wall-associated hydrolase [Phaseolus vulgaris]
Solyc10g006230.3.1	1168	75027.0417034265	7219.65877678353	-3.37740811663047	1.34010658305647e-14	Down	4.58924772461501e-16	GO:0009521//photosystem;GO:0010287//plastoglobule;GO:0009535//chloroplast thylakoid membrane;GO:0009523//photosystem II;GO:0009534//chloroplast thylakoid;GO:0031224//intrinsic component of membrane;GO:0016021//integral component of membrane;GO:0009941//chloroplast envelope;GO:0009522//photosystem I	GO:0043169//cation binding;GO:0031409//pigment binding;GO:0046872//metal ion binding;GO:0046906//tetrapyrrole binding;GO:0016168//chlorophyll binding	GO:0009768//photosynthesis, light harvesting in photosystem I;GO:0006464//cellular protein modification process;GO:0006091//generation of precursor metabolites and energy;GO:0009416//response to light stimulus;GO:0018298//protein-chromophore linkage	K08908//light-harvesting complex I chlorophyll a/b binding protein 2	gi|823270989|ref|NP_001296176.1|//chlorophyll a-b binding protein 7, chloroplastic [Solanum lycopersicum]
Solyc06g049070.3.1	1853	897.42472756214	2257.49166099748	1.33085781694317	9.38473946567522e-05	Up	1.62872174415476e-05	GO:0031224//intrinsic component of membrane	NA	NA	K15285//solute carrier family 35, member E3	gi|460390496|ref|XP_004240867.1|//PREDICTED: uncharacterized membrane protein At1g06890-like [Solanum lycopersicum]
Solyc12g042890.2.1	1213	493.909294867092	148.13833586557	-1.73730108334267	0.0401622343786358	Down	0.0144373262392859	NA	GO:0003824//catalytic activity	NA	K06130//lysophospholipase II [EC:3.1.1.5]	gi|460413914|ref|XP_004252320.1|//PREDICTED: acyl-protein thioesterase 2-like [Solanum lycopersicum]
Solyc05g052890.3.1	952	13.3896231755541	2.36105341660287	-2.50361277277606	0.0196110248586234	Down	0.00628871503126351	NA	NA	NA	K06700//proteasome inhibitor subunit 1 (PI31)	gi|460388530|ref|XP_004239920.1|//PREDICTED: uncharacterized protein LOC101251381 [Solanum lycopersicum]
Solyc10g008020.3.1	1459	1995.23811961375	136.340352542909	-3.87127640992763	4.54945051508254e-16	Down	1.29727510214632e-17	NA	GO:0016741//transferase activity, transferring one-carbon groups	GO:0006730//one-carbon metabolic process	K20069//adaptin ear-binding coat-associated protein 1/2;K18534//MPBQ/MSBQ methyltransferase [EC:2.1.1.295]	gi|460405455|ref|XP_004248191.1|//PREDICTED: uncharacterized protein LOC101245590 [Solanum lycopersicum]
Solyc05g006830.3.1	2046	785.314894533674	198.89404790907	-1.98127115716119	0.000181483251573776	Down	3.38099482393668e-05	NA	NA	NA	K03671//thioredoxin 1	gi|460386125|ref|XP_004238750.1|//PREDICTED: thioredoxin H2-like [Solanum lycopersicum]
Solyc03g111110.1.1	2413	596.409012218338	18.3806519363325	-5.02004221501761	5.98674003945254e-22	Down	9.14925978893522e-24	NA	NA	NA	K01638//malate synthase [EC:2.3.3.9]	gi|142942514|gb|ABO93005.1|//hypothetical protein [Solanum tuberosum];gi|970017545|ref|XP_015069912.1|//PREDICTED: malate synthase, glyoxysomal-like [Solanum pennellii]
Solyc03g093540.1.1	687	1207.41441873598	159.240680044095	-2.92264009202476	0.000304580433711024	Down	5.96036706792484e-05	NA	NA	NA	K09286//EREBP-like factor	gi|723683097|ref|XP_004235184.2|//PREDICTED: ethylene-responsive transcription factor 5-like [Solanum lycopersicum]
Solyc03g013240.3.1	1696	2020.27750454948	128.089297949105	-3.97933162811417	1.30976983509332e-19	Down	2.54357419145527e-21	NA	NA	NA	K10755//replication factor C subunit 2/4	gi|460377016|ref|XP_004234292.1|//PREDICTED: uncharacterized protein LOC101263285 [Solanum lycopersicum]
Solyc11g010250.1.1	426	1417.71707916782	6816.45540088814	2.26545206801879	0.000714378878617041	Up	0.000153058364182598	NA	NA	NA	NA	gi|460409381|ref|XP_004250117.1|//PREDICTED: uncharacterized protein LOC101262884 [Solanum lycopersicum]
Solyc01g007070.3.1	3016	2855.00575439	7157.4692264235	1.32595590895654	0.0119810211893598	Up	0.00357983695593814	GO:0005634//nucleus;GO:0005737//cytoplasm	GO:0003677//DNA binding;GO:0046982//protein heterodimerization activity;GO:0042803//protein homodimerization activity	GO:0006355//regulation of transcription, DNA-templated;GO:0010197//polar nucleus fusion;GO:0010201//response to continuous far red light stimulus by the high-irradiance response system	K16670//homeobox protein Meis2;K15613//homeobox protein Meis1	gi|460365445|ref|XP_004228612.1|//PREDICTED: BEL1-like homeodomain protein 1 [Solanum lycopersicum]
Solyc05g052130.3.1	1471	51.4956049082946	169.819382901663	1.72147992482851	0.00101184952943906	Up	0.000225052413231061	NA	NA	NA	NA	gi|460388651|ref|XP_004239980.1|//PREDICTED: metacaspase-1-like [Solanum lycopersicum]
Solyc03g031910.3.1	3981	422.718964607079	851.396269813419	1.01013193129915	0.0352873681069382	Up	0.0124244997442276	NA	NA	NA	K10706//senataxin [EC:3.6.4.-]	gi|723679996|ref|XP_010317671.1|//PREDICTED: uncharacterized protein LOC101258828 isoform X1 [Solanum lycopersicum]
Solyc12g089350.2.1	1083	13.3978797718338	0.510774255268564	-4.71317509034017	0.0023610756268714	Down	0.000575043542044794	NA	NA	NA	K21026;K01188//beta-glucosidase [EC:3.2.1.21];K00679//phospholipid:diacylglycerol acyltransferase [EC:2.3.1.158];K10960//geranylgeranyl reductase [EC:1.3.1.83]	gi|970067497|ref|XP_015060842.1|//PREDICTED: GDSL esterase/lipase EXL3-like [Solanum pennellii]
Solyc01g109970.3.1	3901	185.232600764925	416.285649098617	1.16823579039112	0.000267470660950406	Up	5.17326989636084e-05	NA	NA	NA	K10875//DNA repair and recombination protein RAD54 and RAD54-like protein [EC:3.6.4.-]	gi|460370055|ref|XP_004230870.1|//PREDICTED: SNF2 domain-containing protein CLASSY 3 [Solanum lycopersicum]
Solyc06g065945.1.1	3605	17.5813812555062	64.953275012178	1.8853538515427	0.00306443930319368	Up	0.000771135743844511	NA	NA	NA	K17604//zinc finger SWIM domain-containing protein 3	gi|971561334|ref|XP_015166914.1|//PREDICTED: protein FAR1-RELATED SEQUENCE 6-like [Solanum tuberosum]
Solyc02g091190.3.1	1369	889.891216164922	1888.109762433	1.08524174485185	0.000696387790126165	Up	0.00014873647075529	NA	NA	NA	NA	gi|970012196|ref|XP_015067040.1|//PREDICTED: protein-lysine N-methyltransferase Mettl10 [Solanum pennellii]
Solyc05g014280.3.1	1178	447.455381790005	12.8414257432629	-5.12286653620363	1.64759882608744e-11	Down	8.75141019522366e-13	NA	NA	GO:0050896//response to stimulus	K13993//HSP20 family protein	gi|350535865|ref|NP_001234217.1|//small heat shock protein [Solanum lycopersicum];gi|723696714|ref|XP_010320556.1|//PREDICTED: small heat shock protein isoform X1 [Solanum lycopersicum]
Solyc06g071030.3.1	2313	268.973046064664	55.5410425230019	-2.27583544440255	2.22440830774534e-07	Down	2.30164113128742e-08	NA	GO:0008909//isochorismate synthase activity;GO:0050486//intramolecular transferase activity, transferring hydroxy groups	GO:0008152//metabolic process;GO:0009058//biosynthetic process	K02552//menaquinone-specific isochorismate synthase [EC:5.4.4.2]	gi|970035986|ref|XP_015079331.1|//PREDICTED: isochorismate synthase, chloroplastic isoform X4 [Solanum pennellii];gi|350537157|ref|NP_001234794.1|//isochorismate synthase [Solanum lycopersicum];gi|970035980|ref|XP_015079328.1|//PREDICTED: isochorismate synthase, chloroplastic isoform X1 [Solanum pennellii]
Solyc02g063350.1.1	438	60.6828939729083	143.013175330206	1.23678626924237	0.00895886799487933	Up	0.0025803329728803	NA	NA	NA	K13448//calcium-binding protein CML	gi|460375364|ref|XP_004233476.1|//PREDICTED: probable calcium-binding protein CML18 [Solanum lycopersicum]
Solyc02g071710.2.1	1631	269.857430432974	86.7039783400016	-1.63802731503525	0.0405370149702856	Down	0.0146037814853068	NA	NA	NA	K21026;K17604//zinc finger SWIM domain-containing protein 3;K01188//beta-glucosidase [EC:3.2.1.21];K00679//phospholipid:diacylglycerol acyltransferase [EC:2.3.1.158];K10960//geranylgeranyl reductase [EC:1.3.1.83]	gi|460374417|ref|XP_004233007.1|//PREDICTED: GDSL esterase/lipase At1g29670-like [Solanum lycopersicum]
Solyc12g100120.2.1	2561	1560.22837710163	183.964373313114	-3.08425891282781	4.78107534759473e-18	Down	1.08174770239675e-19	NA	NA	NA	K09955//uncharacterized protein	gi|565400605|ref|XP_006365812.1|//PREDICTED: uncharacterized protein LOC102603152 [Solanum tuberosum];gi|460414999|ref|XP_004252848.1|//PREDICTED: uncharacterized protein LOC101244563 [Solanum lycopersicum]
Solyc11g068750.2.1	1133	2428.56793663155	23592.0837894611	3.280125101472	1.25594017306637e-06	Up	1.50461894894711e-07	NA	NA	NA	K12581//CCR4-NOT transcription complex subunit 7/8;K03094//S-phase kinase-associated protein 1;K13126//polyadenylate-binding protein;K01054//acylglycerol lipase [EC:3.1.1.23]	gi|460411356|ref|XP_004251078.1|//PREDICTED: F-box protein At2g27310 [Solanum lycopersicum];gi|723745579|ref|XP_004251082.2|//PREDICTED: NAC domain-containing protein 89-like [Solanum lycopersicum]
Solyc11g064790.2.1	1434	818.865042982523	3007.17865785872	1.87671297539994	1.48127507674789e-11	Up	7.81274874607973e-13	GO:0031224//intrinsic component of membrane	GO:0004175//endopeptidase activity	NA	K09595//minor histocompatibility antigen H13 [EC:3.4.23.-]	gi|460410973|ref|XP_004250889.1|//PREDICTED: signal peptide peptidase-like [Solanum lycopersicum]
Solyc02g080070.3.1	2462	1961.21965698248	10251.4528838676	2.38600535789557	0.000140460230901918	Up	2.54554063905295e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460373901|ref|XP_004232751.1|//PREDICTED: putative receptor-like protein kinase At4g00960 [Solanum lycopersicum]
Solyc10g007100.3.1	1588	424.332984100386	52.0865225832138	-3.02621479828779	3.26024537639116e-07	Down	3.47437063184074e-08	NA	NA	NA	K03327//multidrug resistance protein, MATE family	gi|723734521|ref|XP_010327132.1|//PREDICTED: MATE efflux family protein LAL5 [Solanum lycopersicum]
Solyc03g063560.3.1	4758	23601.3323317474	3965.64701392358	-2.57324013154123	1.82499343310836e-09	Down	1.3455483117222e-10	NA	GO:0015930//glutamate synthase activity	GO:0006537//glutamate biosynthetic process;GO:0055114//oxidation-reduction process	K00284//glutamate synthase (ferredoxin) [EC:1.4.7.1]	gi|698497371|ref|XP_009794669.1|//PREDICTED: ferredoxin-dependent glutamate synthase, chloroplastic [Nicotiana sylvestris];gi|460378131|ref|XP_004234830.1|//PREDICTED: ferredoxin-dependent glutamate synthase, chloroplastic [Solanum lycopersicum];gi|225441236|ref|XP_002267056.1|//PREDICTED: ferredoxin-dependent glutamate synthase, chloroplastic [Vitis vinifera]
Solyc09g072810.3.1	3660	68.0413638615142	697.238663914002	3.35716860868229	9.73994448235068e-07	Up	1.13889241990212e-07	GO:0016020//membrane	GO:0000166//nucleotide binding;GO:0004672//protein kinase activity;GO:0004871//signal transducer activity;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460404056|ref|XP_004247501.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Solanum lycopersicum]
Solyc01g097650.3.1	2148	25.4840079917794	138.709656413191	2.44440412573547	0.000353811056503811	Up	7.02267733667361e-05	GO:0044464//cell part;GO:0016021//integral component of membrane	GO:0015194//L-serine transmembrane transporter activity	GO:0015825//L-serine transport	NA	gi|460368521|ref|XP_004230114.1|//PREDICTED: probable serine incorporator [Solanum lycopersicum]
Solyc05g009300.1.1	483	996.624568278255	276.136108866062	-1.85167058513741	2.88591594876424e-05	Down	4.50937813374821e-06	NA	NA	NA	NA	gi|460386478|ref|XP_004238925.1|//PREDICTED: uncharacterized protein LOC101253483 [Solanum lycopersicum]
Solyc09g055910.3.1	2525	1868.1658491066	734.832759871339	-1.34613468770085	2.68319789281718e-06	Down	3.42350767374132e-07	NA	GO:0016491//oxidoreductase activity	NA	K00454//lipoxygenase [EC:1.13.11.12]	gi|460403069|ref|XP_004247025.1|//PREDICTED: uncharacterized protein LOC101255236 [Solanum lycopersicum]
BGI_novel_G000069	1499	394.72584854804	2.08208012961444	-7.56668159436146	1.29666120414377e-14	Down	4.41757991869467e-16	NA	NA	NA	K00430//peroxidase [EC:1.11.1.7]	gi|969998249|ref|XP_015071866.1|//PREDICTED: periaxin-like [Solanum pennellii]
Solyc01g099780.3.1	840	951.521893316798	312.748590462142	-1.60523346920002	0.00601476423159717	Down	0.00164964347756419	GO:0044424//intracellular part;GO:0005737//cytoplasm	NA	NA	NA	gi|460368783|ref|XP_004230244.1|//PREDICTED: translationally-controlled tumor protein homolog [Solanum lycopersicum]
Solyc04g050730.3.1	1266	1062.84858252702	143.90552759501	-2.88474216564295	0.00162737522193038	Down	0.000380032270962942	NA	GO:0016787//hydrolase activity	GO:0044238//primary metabolic process	K21026;K01188//beta-glucosidase [EC:3.2.1.21];K00679//phospholipid:diacylglycerol acyltransferase [EC:2.3.1.158];K10960//geranylgeranyl reductase [EC:1.3.1.83]	gi|970024748|ref|XP_015073680.1|//PREDICTED: GDSL esterase/lipase At5g33370-like [Solanum pennellii]
Solyc08g006830.3.1	1347	386.990285094738	97.0653500565624	-1.99526906377715	0.000148420112775949	Down	2.70694651786462e-05	NA	GO:0008171//O-methyltransferase activity	GO:0006730//one-carbon metabolic process	K18883//tricin synthase [EC:2.1.1.175];K00588//caffeoyl-CoA O-methyltransferase [EC:2.1.1.104]	gi|460397949|ref|XP_004244527.1|//PREDICTED: tricin synthase 1-like [Solanum lycopersicum]
Solyc02g043940.1.1	234	21.4223298689925	0.427392600485853	-5.64740965370727	5.2370514929951e-05	Down	8.61064340823072e-06	NA	NA	NA	NA	NA
Solyc11g045530.2.1	2085	45.4381848712897	7.91910166147372	-2.52049651818252	0.00258284569006488	Down	0.000636180271356372	NA	NA	NA	K13944	gi|460410747|ref|XP_004250781.1|//PREDICTED: LOB domain-containing protein 4-like [Solanum lycopersicum]
Solyc09g083440.3.1	571	11827.6254207779	2128.43678126381	-2.47429431434311	0.0224101867830385	Down	0.00735088876139625	NA	GO:0004866//endopeptidase inhibitor activity	GO:0006950//response to stress;GO:0051346//negative regulation of hydrolase activity	NA	gi|460404367|ref|XP_004247654.1|//PREDICTED: wound-induced proteinase inhibitor 1 [Solanum lycopersicum]
Solyc12g019975.1.1	2580	426.32626320288	156.769333557548	-1.44331455897081	0.000236379254220015	Down	4.51110916699856e-05	NA	NA	NA	K12118//cryptochrome 1	gi|698474618|ref|XP_009784753.1|//PREDICTED: uncharacterized protein LOC104233125 [Nicotiana sylvestris];gi|565343720|ref|XP_006338976.1|//PREDICTED: UDP-glucose iridoid glucosyltransferase-like isoform X2 [Solanum tuberosum]
Solyc07g043510.3.1	1761	538.434648782776	1947.54896754698	1.85481644581498	5.74307773912751e-07	Up	6.3964202640946e-08	NA	NA	NA	K13717//OTU domain-containing protein 3 [EC:3.4.19.12];K16743//abnormal spindle-like microcephaly-associated protein	gi|460396137|ref|XP_004243635.1|//PREDICTED: OTU domain-containing protein DDB_G0284757-like [Solanum lycopersicum]
Solyc01g087730.3.1	1436	11896.5569565343	4145.21023130873	-1.52102691878862	0.000124282394189512	Down	2.22127253349268e-05	GO:0030529//intracellular ribonucleoprotein complex	GO:0005198//structural molecule activity;GO:0003676//nucleic acid binding	GO:0010467//gene expression	K02863//large subunit ribosomal protein L1	gi|460367599|ref|XP_004229660.1|//PREDICTED: 50S ribosomal protein L1, chloroplastic [Solanum lycopersicum]
Solyc06g059800.3.1	2928	2583.50499538185	234.055660794527	-3.46440611017382	1.30584144933148e-30	Down	9.19949433143172e-33	NA	GO:0016597//amino acid binding;GO:0031406//carboxylic acid binding	GO:0008152//metabolic process	K07305//peptide-methionine (R)-S-oxide reductase [EC:1.8.4.12];K07739//elongator complex protein 3 [EC:2.3.1.48];K00688//starch phosphorylase [EC:2.4.1.1];K03978//GTP-binding protein;K08955//ATP-dependent metalloprotease [EC:3.4.24.-]	gi|975830141|ref|NP_001305987.1|//ACT domain-containing protein [Solanum lycopersicum]
BGI_novel_G000301	359	21.3765120569987	3.95150523728489	-2.43555224651167	0.0266917647621855	Down	0.00901001273618427	NA	NA	NA	NA	gi|971558281|ref|XP_015166153.1|//PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like [Solanum tuberosum]
Solyc03g095610.3.1	3246	21.1785250932581	1710.33905494886	6.33553641964161	7.934117765432e-19	Up	1.66501725881102e-20	NA	NA	NA	NA	gi|460379400|ref|XP_004235450.1|//PREDICTED: uncharacterized protein LOC101254071 [Solanum lycopersicum]
Solyc09g007750.3.1	2217	242.274396411526	65.4574567355841	-1.8880124941095	0.00638587766901142	Down	0.00176523292058255	NA	GO:0000166//nucleotide binding	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460402317|ref|XP_004246660.1|//PREDICTED: serine/threonine-protein kinase-like protein CCR1 isoform X1 [Solanum lycopersicum]
Solyc05g026240.2.1	1122	338.461953878896	73.6795195134484	-2.19965811289546	0.000596871669526217	Down	0.000125746185931198	NA	GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;GO:0016772//transferase activity, transferring phosphorus-containing groups	GO:0006796//phosphate-containing compound metabolic process	K02984//small subunit ribosomal protein S3Ae;K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|460387320|ref|XP_004239326.1|//PREDICTED: leucine-rich repeat extensin-like protein 4 [Solanum lycopersicum]
Solyc12g010520.2.1	1918	915.185161194357	2047.55685816792	1.16176794874065	0.0111438768823157	Up	0.00330257522427201	GO:0044424//intracellular part;GO:0005737//cytoplasm	GO:0016149//translation release factor activity, codon specific;GO:0003747//translation release factor activity	GO:0006415//translational termination;GO:0006412//translation	K03265//peptide chain release factor subunit 1	gi|460412789|ref|XP_004251780.1|//PREDICTED: eukaryotic peptide chain release factor subunit 1-3 [Solanum lycopersicum]
Solyc03g113880.3.1	1342	90.1521999847805	22.4149334011189	-2.00790248530137	0.0206367961855647	Down	0.00667765124820662	NA	NA	NA	K10773//endonuclease III [EC:4.2.99.18]	gi|460380808|ref|XP_004236146.1|//PREDICTED: transcriptional activator DEMETER [Solanum lycopersicum]
Solyc06g063070.3.1	1564	2976.41204539386	12312.7808985539	2.04851047029644	2.08902407260579e-05	Up	3.18243677677795e-06	GO:0043231//intracellular membrane-bounded organelle	GO:0001071//nucleic acid binding transcription factor activity;GO:0003676//nucleic acid binding	GO:0006351//transcription, DNA-templated	K09286//EREBP-like factor	gi|350536647|ref|NP_001234513.1|//transcription factor JERF1 [Solanum lycopersicum]
Solyc03g111280.1.1	1479	0.849798053893493	126.222427880868	7.21463252381921	1.47786956265536e-12	Up	6.75364575747528e-14	NA	NA	NA	K20665	gi|460381637|ref|XP_004236553.1|//PREDICTED: cytochrome P450 94B3-like [Solanum lycopersicum]
Solyc12g098520.2.1	1742	536.414477833029	1778.40759777695	1.72916593578786	1.3520044309721e-06	Up	1.62675946890485e-07	NA	GO:0003677//DNA binding	GO:0006351//transcription, DNA-templated	K09419//heat shock transcription factor, other eukaryote	gi|970064457|ref|XP_015059195.1|//PREDICTED: heat stress transcription factor A-5 [Solanum pennellii]
Solyc05g009330.3.1	944	352.961288566594	157.878507632772	-1.16069517579787	0.046660726658636	Down	0.0172603642224655	NA	NA	NA	NA	gi|460386484|ref|XP_004238928.1|//PREDICTED: uncharacterized protein LOC101254384 [Solanum lycopersicum]
Solyc04g011520.3.1	1866	872.552492472445	3567.36881652103	2.03154654709145	0.000840228230638892	Up	0.000183404522089658	NA	GO:0004713//protein tyrosine kinase activity;GO:0032559//adenyl ribonucleotide binding	GO:0006464//cellular protein modification process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460382034|ref|XP_004236745.1|//PREDICTED: protein kinase APK1A, chloroplastic [Solanum lycopersicum]
Solyc05g009550.3.1	2706	229.631879861251	1426.00069284777	2.63457983193453	0.00301506841158033	Up	0.00075668911641458	NA	NA	NA	K19476//vacuolar protein sorting-associated protein IST1	gi|460386510|ref|XP_004238941.1|//PREDICTED: biorientation of chromosomes in cell division protein 1-like 1 [Solanum lycopersicum]
Solyc10g085180.2.1	1178	184.562561589435	423.725431712491	1.19901978808273	0.000730267569172058	Up	0.000156771832928297	NA	NA	NA	NA	gi|460408380|ref|XP_004249623.1|//PREDICTED: PHD finger protein ALFIN-LIKE 2 [Solanum lycopersicum]
Solyc01g006940.3.1	1176	3836.171364192	643.929108465522	-2.57469339508368	1.9394099885685e-08	Down	1.66412770004648e-09	GO:0009536//plastid	GO:0003676//nucleic acid binding	NA	K11294//nucleolin	gi|460365566|ref|XP_004228672.1|//PREDICTED: 33 kDa ribonucleoprotein, chloroplastic [Solanum lycopersicum]
Solyc08g078940.1.1	414	132.090975846503	2.43624667223198	-5.7607278832501	1.97715408818429e-05	Down	2.98769296015324e-06	NA	NA	NA	K02883//large subunit ribosomal protein L18e;K11855//ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12]	gi|970044850|ref|XP_015083850.1|//PREDICTED: 14 kDa proline-rich protein DC2.15-like [Solanum pennellii]
Solyc01g007180.3.1	822	59.2679390640778	152.130494390544	1.35998557231995	8.52618454152925e-05	Up	1.46732496005071e-05	NA	NA	NA	NA	gi|460365399|ref|XP_004228590.1|//PREDICTED: uncharacterized protein LOC101262944 [Solanum lycopersicum]
Solyc02g088260.3.1	1414	2189.3981515768	9678.76086507896	2.14428801782062	1.13874214961737e-05	Up	1.63247439519473e-06	NA	NA	NA	NA	gi|460372787|ref|XP_004232206.1|//PREDICTED: uncharacterized protein At5g39570 [Solanum lycopersicum]
Solyc01g097160.3.1	2032	1616.98207689391	580.840166971267	-1.4770905587309	9.94329510851257e-06	Down	1.41284631555278e-06	NA	NA	NA	K06955//uncharacterized protein	gi|460368458|ref|XP_004230083.1|//PREDICTED: uncharacterized protein LOC101257708 [Solanum lycopersicum]
Solyc09g009630.3.1	1433	88.3892339655437	177.696816817778	1.00747527630743	0.00590535158990438	Up	0.00161567320224758	GO:0044464//cell part	NA	NA	K08658//prenyl protein peptidase [EC:3.4.22.-]	gi|460402060|ref|XP_004246532.1|//PREDICTED: CAAX prenyl protease 2 [Solanum lycopersicum]
Solyc04g010310.3.1	4052	1387.49070988557	3235.33895862419	1.22143875604686	0.00472949058879135	Up	0.00125553272600909	NA	NA	NA	K05658//ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:3.6.3.44]	gi|460382069|ref|XP_004236762.1|//PREDICTED: ABC transporter B family member 6-like [Solanum lycopersicum]
Solyc01g102860.2.1	1110	1119.42956963482	100.61172788435	-3.47589337308543	4.13561440035752e-23	Down	5.6111661015735e-25	NA	NA	NA	NA	gi|460369099|ref|XP_004230401.1|//PREDICTED: uncharacterized protein LOC101252228 [Solanum lycopersicum]
Solyc05g054260.3.1	3406	1036.7425802105	2086.7352152659	1.00918982713716	0.0114888835438157	Up	0.00341223438486371	GO:0015630//microtubule cytoskeleton	GO:0032559//adenyl ribonucleotide binding;GO:0003774//motor activity	GO:0007017//microtubule-based process	K10393//kinesin family member 2/24	gi|460388313|ref|XP_004239812.1|//PREDICTED: kinesin-13A-like [Solanum lycopersicum]
Solyc05g024010.3.1	2137	101.442406330983	928.783669208215	3.19468173214973	1.16021837913457e-13	Up	4.51061491515342e-15	NA	NA	NA	K12135//zinc finger protein CONSTANS	gi|460387265|ref|XP_004239301.1|//PREDICTED: zinc finger protein CONSTANS-LIKE 14-like [Solanum lycopersicum]
Solyc06g051330.1.1	728	155.295708144568	30.1816656416028	-2.3632736275236	3.90100688302971e-06	Down	5.10527626595994e-07	NA	NA	NA	K12447//UDP-sugar pyrophosphorylase [EC:2.7.7.64];K08235//xyloglucan:xyloglucosyl transferase [EC:2.4.1.207];K06892//feruloyl-CoA ortho-hydroxylase [EC:1.14.11.-];K17982//geranyllinalool synthase [EC:4.2.3.144]	gi|723688342|ref|XP_010319082.1|//PREDICTED: uncharacterized protein LOC101254987 [Solanum lycopersicum]
Solyc01g008550.4.1	1402	2698.94658394751	5966.62577474925	1.14451887019638	0.00018675224220439	Up	3.48531443383924e-05	NA	GO:0048037//cofactor binding	GO:0008152//metabolic process	K09753//cinnamoyl-CoA reductase [EC:1.2.1.44]	gi|350537935|ref|NP_001234830.1|//phenylacetaldehyde reductase [Solanum lycopersicum]
Solyc03g007110.3.1	1528	3242.72651688246	1292.27526015642	-1.32729395280051	0.000780953508301365	Down	0.000169097917463942	NA	NA	NA	K03696//ATP-dependent Clp protease ATP-binding subunit ClpC	gi|460376748|ref|XP_004234159.1|//PREDICTED: clp protease-related protein At4g12060, chloroplastic-like [Solanum lycopersicum]
Solyc11g068780.1.1	414	12.290539061072	65.465069763622	2.41317713881686	4.01513802867863e-05	Up	6.44744842237496e-06	NA	NA	NA	K01870//isoleucyl-tRNA synthetase [EC:6.1.1.5]	gi|971578284|ref|XP_015158684.1|//PREDICTED: transcription repressor OFP6 [Solanum tuberosum]
Solyc03g006470.3.1	1620	13.0752076434467	43.0862060809687	1.72039221110195	0.02804948415056	Up	0.00953209881469567	NA	NA	NA	NA	gi|460376672|ref|XP_004234121.1|//PREDICTED: CBS domain-containing protein CBSX5-like [Solanum lycopersicum]
Solyc01g103500.3.1	3542	225.313816067786	581.627488026028	1.36815967218517	0.000409211758370514	Up	8.25043387888069e-05	NA	NA	NA	K07119//uncharacterized protein;K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4;K01183//chitinase [EC:3.2.1.14]	gi|460369194|ref|XP_004230448.1|//PREDICTED: MACPF domain-containing protein At4g24290 [Solanum lycopersicum]
Solyc09g074340.3.1	2028	115.503571659605	291.960657023575	1.33783650865792	0.000354742490122008	Up	7.04380962009817e-05	NA	NA	NA	K20642	gi|723731581|ref|XP_010326614.1|//PREDICTED: rho GTPase-activating protein 2-like isoform X2 [Solanum lycopersicum];gi|460404004|ref|XP_004247475.1|//PREDICTED: rho GTPase-activating protein 2-like isoform X1 [Solanum lycopersicum]
Solyc04g008720.3.1	3358	294.464001125847	117.418273211689	-1.32643432693347	0.0171363512941393	Down	0.00537762567263155	NA	NA	NA	K18643//katanin p80 WD40 repeat-containing subunit B1	gi|460382301|ref|XP_004236878.1|//PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog isoform X1 [Solanum lycopersicum]
Solyc09g097950.2.1	435	0.424233227406694	9.08006508749524	4.4197731117955	0.00493877183592731	Up	0.00131808581874309	NA	NA	NA	NA	gi|723733475|ref|XP_010326948.1|//PREDICTED: auxin-induced protein PCNT115-like isoform X2 [Solanum lycopersicum]
Solyc02g063250.3.1	1246	22.4358924891573	687.648801234927	4.93779145400505	1.10570934442769e-16	Up	2.93861175852448e-18	NA	NA	NA	K07304//peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]	gi|460375386|ref|XP_004233487.1|//PREDICTED: peptide methionine sulfoxide reductase isoform X1 [Solanum lycopersicum]
Solyc04g072160.3.1	4900	843.338513652386	183.733738131678	-2.19849527521908	3.48173438611839e-07	Down	3.74155368837755e-08	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial;K14845//RAT1-interacting protein;K17710//pentatricopeptide repeat domain-containing protein 1;K15730//cytosolic prostaglandin-E synthase [EC:5.3.99.3]	gi|460384289|ref|XP_004237845.1|//PREDICTED: pentatricopeptide repeat-containing protein At4g17616 [Solanum lycopersicum]
Solyc09g064800.2.1	2769	1166.13369302976	242.049239199864	-2.26836073311972	7.81095605060785e-07	Down	8.91790606195461e-08	GO:0009507//chloroplast	GO:0019156//isoamylase activity;GO:0043167//ion binding;GO:0016798//hydrolase activity, acting on glycosyl bonds	GO:0005977//glycogen metabolic process;GO:0010021//amylopectin biosynthetic process;GO:0044238//primary metabolic process	K01214//isoamylase [EC:3.2.1.68]	gi|723730312|ref|XP_004247144.2|//PREDICTED: isoamylase 2, chloroplastic [Solanum lycopersicum]
Solyc07g053010.2.1	3411	665.636535758794	1421.76246567699	1.09487392549253	0.0178354051192157	Up	0.00564021086295759	NA	NA	NA	K13457//disease resistance protein RPM1	gi|460395722|ref|XP_004243430.1|//PREDICTED: disease resistance RPP13-like protein 4 [Solanum lycopersicum]
Solyc10g081230.2.1	1185	8.67179487325925	0.633834056222294	-3.77415354725924	0.027449275004084	Down	0.00929538778187354	NA	NA	NA	K04505//presenilin 1 [EC:3.4.23.-]	gi|460407821|ref|XP_004249348.1|//PREDICTED: presenilin-like protein At1g08700 [Solanum lycopersicum]
Solyc10g076180.1.1	966	48.9769140453633	11.2814656254031	-2.11814736808329	0.00305178473338113	Down	0.000767268824610696	NA	NA	NA	K01870//isoleucyl-tRNA synthetase [EC:6.1.1.5]	gi|460407206|ref|XP_004249045.1|//PREDICTED: transcription repressor OFP1 [Solanum lycopersicum]
Solyc01g094500.3.1	2393	235.458612588678	88.6247075663439	-1.40969262736814	0.000360128537328916	Down	7.16300609032117e-05	NA	NA	NA	K11752//diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase [EC:3.5.4.26 1.1.1.193]	gi|460368162|ref|XP_004229938.1|//PREDICTED: riboflavin biosynthesis protein PYRD, chloroplastic [Solanum lycopersicum]
Solyc08g079545.1.1	3009	623.986626267305	99.0011001820469	-2.65599864572167	8.6714081743489e-05	Down	1.49490319093349e-05	NA	NA	NA	K05658//ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:3.6.3.44]	gi|460401249|ref|XP_004246139.1|//PREDICTED: uncharacterized protein LOC101245086 [Solanum lycopersicum]
Solyc09g082990.3.1	2609	11527.598146049	1442.12534771549	-2.99882347654364	1.9617183945643e-26	Down	1.93773436170992e-28	NA	GO:0016857//racemase and epimerase activity, acting on carbohydrates and derivatives;GO:0048037//cofactor binding	GO:0008152//metabolic process	K10046//GDP-D-mannose 3', 5'-epimerase [EC:5.1.3.18 5.1.3.-]	gi|350538241|ref|NP_001234589.1|//GDP-mannose 3',5'-epimerase [Solanum lycopersicum]
Solyc08g081680.2.1	912	18.5774010600183	134.459129657084	2.85554712536805	3.90153873466864e-06	Up	5.10742658273307e-07	NA	NA	NA	K03239//translation initiation factor eIF-2B subunit alpha	gi|460400077|ref|XP_004245562.1|//PREDICTED: protein LURP-one-related 8-like [Solanum lycopersicum]
Solyc05g012650.3.1	3918	949.469137331176	333.645027024334	-1.50880710541288	0.000160233354211057	Down	2.95047252796564e-05	NA	NA	NA	NA	gi|723698653|ref|XP_010320887.1|//PREDICTED: uncharacterized protein LOC101264722 isoform X1 [Solanum lycopersicum]
BGI_novel_G000131	744	4.60744841526161	34.4925631602618	2.90424542147426	0.00153500544178982	Up	0.000356344635882922	NA	NA	NA	NA	gi|723680734|ref|XP_010317787.1|//PREDICTED: uncharacterized protein LOC104646212 [Solanum lycopersicum]
Solyc12g017460.1.1	1110	1660.050270566	16818.8101281163	3.34077680774398	5.01541363710975e-08	Up	4.62319886855987e-09	NA	NA	NA	K21026	gi|460413165|ref|XP_004251965.1|//PREDICTED: GDSL esterase/lipase At5g03980-like [Solanum lycopersicum]
Solyc12g098530.2.1	1259	188.968617993411	76.7991930680671	-1.29898360837391	0.00670010636987007	Down	0.00186258361810388	NA	NA	NA	NA	gi|723753156|ref|XP_010314745.1|//PREDICTED: histidine protein methyltransferase 1 homolog isoform X2 [Solanum lycopersicum];gi|723753153|ref|XP_004252981.2|//PREDICTED: histidine protein methyltransferase 1 homolog isoform X1 [Solanum lycopersicum]
Solyc07g055830.3.1	1746	807.477229583317	1878.7049954437	1.21824506237816	0.0024507964003352	Up	0.000599361681176354	GO:0031224//intrinsic component of membrane;GO:0043231//intracellular membrane-bounded organelle;GO:0005634//nucleus;GO:0016021//integral component of membrane	NA	GO:0006355//regulation of transcription, DNA-templated	K15077//elongin-A	gi|460395336|ref|XP_004243240.1|//PREDICTED: uncharacterized protein LOC101258385 [Solanum lycopersicum]
Solyc03g115510.2.1	4423	608.501257160855	244.418205069551	-1.31590849772647	0.0497000285297449	Down	0.0185956877100054	NA	NA	NA	K12811//ATP-dependent RNA helicase DDX46/PRP5 [EC:3.6.4.13];K11984//U4/U6.U5 tri-snRNP-associated protein 1;K11548//kinetochore protein Nuf2;K03254//translation initiation factor 3 subunit A;K10357//myosin V	gi|460381500|ref|XP_004236487.1|//PREDICTED: uncharacterized protein LOC101264110 [Solanum lycopersicum]
Solyc03g114090.1.1	1064	80.1438075871355	29.0988946649699	-1.46162670029224	0.0111094265185363	Down	0.00329001020164644	NA	GO:0046872//metal ion binding	NA	K19041//E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27]	gi|723688427|ref|XP_010319102.1|//PREDICTED: RING-H2 finger protein ATL46-like [Solanum lycopersicum]
Solyc05g051570.3.1	1043	126.670891469813	1566.01034600445	3.62793680259407	6.06110813953372e-17	Up	1.5656582453768e-18	NA	GO:0032561//guanyl ribonucleotide binding	GO:0006810//transport;GO:0035556//intracellular signal transduction	K07893//Ras-related protein Rab-6A	gi|460388728|ref|XP_004240017.1|//PREDICTED: ras-related protein RABH1e [Solanum lycopersicum]
Solyc05g012620.3.1	1555	1751.11022694057	416.824235574413	-2.07075883144466	3.03895175424306e-14	Down	1.09990388898539e-15	GO:0009507//chloroplast	GO:0003677//DNA binding;GO:0003676//nucleic acid binding;GO:0016788//hydrolase activity, acting on ester bonds	GO:0006281//DNA repair	K10301//F-box protein 21;K11940//heat shock protein HspQ	gi|460386790|ref|XP_004239079.1|//PREDICTED: uncharacterized protein LOC101251088 [Solanum lycopersicum]
Solyc01g107460.2.1	1037	2397.4525121087	3.34236248607677	-9.48641831867092	2.87890624828248e-27	Down	2.59689619831653e-29	NA	NA	NA	NA	gi|460369762|ref|XP_004230726.1|//PREDICTED: uncharacterized protein LOC101248432 [Solanum lycopersicum]
Solyc08g080520.3.1	3143	313.648487119907	1225.15084824173	1.96573888485485	3.92971903826837e-08	Up	3.56381631881129e-09	NA	NA	NA	NA	gi|970043625|ref|XP_015083211.1|//PREDICTED: uncharacterized protein LOC107026672 isoform X2 [Solanum pennellii];gi|723724482|ref|XP_010325424.1|//PREDICTED: uncharacterized protein LOC101264749 isoform X1 [Solanum lycopersicum];gi|661886429|emb|CDP09793.1|//unnamed protein product [Coffea canephora];gi|723724490|ref|XP_010325426.1|//PREDICTED: uncharacterized protein LOC101264749 isoform X3 [Solanum lycopersicum]
Solyc08g016582.1.1	804	0.479850721943215	77.5521887329228	7.33643802463972	2.26589950143289e-09	Up	1.69596175595544e-10	NA	NA	NA	K08592//sentrin-specific protease 1 [EC:3.4.22.68]	gi|970033712|ref|XP_015078157.1|//PREDICTED: uncharacterized protein LOC107021961 [Solanum pennellii]
Solyc06g074820.3.1	1034	12455.3163701951	1285.72841668648	-3.27610382637619	1.99950039440614e-05	Down	3.0284960716398e-06	GO:0043231//intracellular membrane-bounded organelle;GO:0031224//intrinsic component of membrane;GO:0031090//organelle membrane	NA	GO:0006810//transport	K09873//aquaporin TIP	gi|350538783|ref|NP_001234103.1|//aquaporin-like [Solanum lycopersicum]
Solyc11g065870.2.1	2459	982.953028443567	303.100321530833	-1.697327094805	8.05057691765362e-07	Down	9.21849272813177e-08	NA	NA	NA	K03977//GTPase	gi|970063193|ref|XP_015058517.1|//PREDICTED: GTPase Der [Solanum pennellii];gi|460411087|ref|XP_004250946.1|//PREDICTED: uncharacterized protein LOC101251249 [Solanum lycopersicum]
Solyc03g059050.2.1	1051	13.4017465305555	38.4412204264575	1.5202331127559	0.0438054867057612	Up	0.0160115030056916	NA	NA	NA	NA	gi|970056625|ref|XP_015054929.1|//PREDICTED: uncharacterized protein LOC107001369 [Solanum pennellii]
Solyc01g096360.3.1	2528	1741.28382605483	200.938960483688	-3.11532215526442	7.10614717169367e-09	Down	5.74345380509887e-10	NA	NA	NA	K20642	gi|460368330|ref|XP_004230020.1|//PREDICTED: rho GTPase-activating protein 5-like [Solanum lycopersicum]
Solyc06g073260.3.1	2566	39815.4206571915	2919.6801305659	-3.76944507353281	3.26057492459429e-51	Down	3.64608795802253e-54	GO:0030529//intracellular ribonucleoprotein complex;GO:0005576//extracellular region;GO:0009526//plastid envelope;GO:0042579//microbody;GO:0009570//chloroplast stroma	GO:0048037//cofactor binding	GO:0009657//plastid organization;GO:0042254//ribosome biogenesis;GO:0006952//defense response;GO:0048511//rhythmic process	K12450//UDP-glucose 4,6-dehydratase [EC:4.2.1.76]	gi|460391607|ref|XP_004241412.1|//PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Solanum lycopersicum];gi|970036035|ref|XP_015079345.1|//PREDICTED: chloroplast stem-loop binding protein of 41 kDa b, chloroplastic [Solanum pennellii]
Solyc05g055470.3.1	2280	911.680318011715	5074.04745732161	2.47653707779518	1.86966317495341e-08	Up	1.6000993923114e-09	NA	NA	NA	K12581//CCR4-NOT transcription complex subunit 7/8;K13126//polyadenylate-binding protein	gi|460388105|ref|XP_004239710.1|//PREDICTED: NAC domain-containing protein 78-like [Solanum lycopersicum]
Solyc07g039380.3.1	615	341.119740385785	48.2578583575846	-2.8214424487089	0.000345418016812569	Down	6.84578647455058e-05	NA	NA	NA	NA	gi|460396394|ref|XP_004243759.1|//PREDICTED: uncharacterized protein LOC101244302 [Solanum lycopersicum]
Solyc00g009140.3.1	697	551.793696862296	93.1136973264666	-2.56706366326323	3.60603544745386e-14	Down	1.32128106636616e-15	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K11168//dehydrogenase/reductase SDR family member 12 [EC:1.1.-.-]	gi|723754078|ref|XP_010314908.1|//PREDICTED: dehydrogenase/reductase SDR family member 12-like [Solanum lycopersicum]
Solyc07g005510.3.1	1933	18301.7972453104	1152.69608404473	-3.98890123667697	7.00210460332474e-20	Down	1.32848935555848e-21	NA	NA	NA	K10255//acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.23 1.14.19.45]	gi|460393982|ref|XP_004242585.1|//PREDICTED: omega-6 fatty acid desaturase, chloroplastic [Solanum lycopersicum]
Solyc06g068215.1.1	2850	206.30370481429	29.3178433047138	-2.81491884529801	0.00011145029527121	Down	1.96953127285226e-05	NA	NA	NA	K17604//zinc finger SWIM domain-containing protein 3	gi|697153668|ref|XP_009631083.1|//PREDICTED: protein FAR1-RELATED SEQUENCE 8 isoform X1 [Nicotiana tomentosiformis]
Solyc06g065620.2.1	2398	31.0200006855904	9.98826490393842	-1.63489272891246	0.0335429411337697	Down	0.011726526200001	NA	NA	NA	NA	gi|723709598|ref|XP_010322745.1|//PREDICTED: uncharacterized protein LOC101251595 isoform X2 [Solanum lycopersicum]
Solyc05g050680.3.1	1588	681.660322924324	1523.13763369448	1.15992139611916	0.000324790341916249	Up	6.40065058040558e-05	GO:0043234//protein complex	GO:0019207//kinase regulator activity;GO:0016772//transferase activity, transferring phosphorus-containing groups	GO:0006796//phosphate-containing compound metabolic process	K03115//casein kinase II subunit beta	gi|460388828|ref|XP_004240066.1|//PREDICTED: putative casein kinase II subunit beta-4 isoform X1 [Solanum lycopersicum]
Solyc06g074030.1.1	795	2619.73997081121	7877.76737461339	1.58836319535343	0.0391389465283098	Up	0.0140125831744601	NA	NA	NA	K12581//CCR4-NOT transcription complex subunit 7/8	gi|460391467|ref|XP_004241342.1|//PREDICTED: probable CCR4-associated factor 1 homolog 9 [Solanum lycopersicum]
Solyc01g105560.3.1	2104	3204.53985495337	8591.76181380825	1.42283678577617	0.000593222572490742	Up	0.000124778402287359	NA	NA	NA	K14652//3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25]	gi|927442667|ref|NP_001234776.2|//GTP cyclohydrolase II / 3,4-dihydroxy-2-butanone-4-phosphate synthase [Solanum lycopersicum]
Solyc07g062710.3.1	1005	259.295332825851	10.3137211344389	-4.65195939044543	1.54297255607583e-09	Down	1.12438920051001e-10	NA	NA	NA	K20557;K04374//cyclic AMP-dependent transcription factor ATF-4	gi|460397402|ref|XP_004244256.1|//PREDICTED: basic leucine zipper 61-like [Solanum lycopersicum]
Solyc12g015690.2.1	681	123.180413923721	20.8923288809317	-2.5597276565857	0.00164929005518073	Down	0.000385518783958489	NA	NA	NA	K19519//transforming growth factor-beta-induced protein	gi|723748794|ref|XP_010313936.1|//PREDICTED: fasciclin-like arabinogalactan protein 1 [Solanum lycopersicum]
Solyc03g111320.1.1	1998	1513.90592243142	4531.70012828584	1.58177684253645	0.00129961811936619	Up	0.000295951826252469	NA	NA	NA	K07195//exocyst complex component 7	gi|723688201|ref|XP_010319057.1|//PREDICTED: exocyst complex component EXO70B1 [Solanum lycopersicum]
Solyc02g088610.3.1	4147	3086.6800848073	813.066006466321	-1.92461158104566	2.89674537965154e-10	Down	1.88415859828982e-11	GO:0005737//cytoplasm	GO:0005524//ATP binding	GO:0016485//protein processing;GO:0009408//response to heat	K03695//ATP-dependent Clp protease ATP-binding subunit ClpB	gi|927442671|ref|NP_001234143.2|//heat shock protein [Solanum lycopersicum];gi|747077234|ref|XP_011085728.1|//PREDICTED: chaperone protein ClpB3, chloroplastic isoform X2 [Sesamum indicum]
Solyc06g007620.3.1	1155	525.378502195187	153.421534545585	-1.77585617193378	9.42457996083246e-07	Down	1.09709867368718e-07	NA	NA	NA	NA	gi|460389602|ref|XP_004240440.1|//PREDICTED: uncharacterized protein LOC101251683 [Solanum lycopersicum]
Solyc09g092380.3.1	1578	11717.4147461185	24155.9013394009	1.0437213876111	0.00609215078217519	Up	0.00167313877154714	GO:0044424//intracellular part	GO:0016802//trialkylsulfonium hydrolase activity	GO:0044237//cellular metabolic process	K01251//adenosylhomocysteinase [EC:3.3.1.1]	gi|807201089|ref|NP_001234012.2|//adenosylhomocysteinase [Solanum lycopersicum]
Solyc07g056610.2.1	2408	0.451124610742391	38.5278428336838	6.41623160854435	9.85043773579133e-07	Up	1.15364825428121e-07	NA	NA	NA	K05609//ubiquitin carboxyl-terminal hydrolase L3 [EC:3.4.19.12]	gi|723714546|ref|XP_010323617.1|//PREDICTED: uncharacterized protein LOC101248219 [Solanum lycopersicum]
Solyc12g056200.2.1	2082	71.3222475308973	9.70565806783388	-2.87745422668418	0.00282385848872373	Down	0.000703017401453175	NA	NA	NA	K08176//MFS transporter, PHS family, inorganic phosphate transporter;K03509//DNA polymerase eta [EC:2.7.7.7];K13675	gi|460414449|ref|XP_004252583.1|//PREDICTED: uncharacterized protein LOC101263884 [Solanum lycopersicum]
Solyc06g007590.3.1	1217	742.229374697591	211.706004962725	-1.80980290726869	3.60181738626926e-06	Down	4.68821615955429e-07	NA	NA	NA	K02503//histidine triad (HIT) family protein	gi|926657589|ref|NP_001234539.2|//histidine triad family protein [Solanum lycopersicum]
Solyc03g098680.3.1	1959	2.10563215458398	56.065016007827	4.73477549424343	3.71353773223985e-09	Up	2.87914063033357e-10	NA	NA	NA	NA	gi|460379480|ref|XP_004235490.1|//PREDICTED: miraculin-like [Solanum lycopersicum]
Solyc11g066060.2.1	2234	7120.16806824849	67096.6259602007	3.23625701963077	1.85345459862115e-19	Up	3.66158840490983e-21	NA	GO:0032559//adenyl ribonucleotide binding	GO:0050896//response to stimulus	K03283//heat shock 70kDa protein 1/8	gi|807045793|ref|NP_001234491.2|//heat shock cognate 70 kDa protein 1 [Solanum lycopersicum];gi|460411111|ref|XP_004250958.1|//PREDICTED: heat shock cognate 70 kDa protein 2-like [Solanum lycopersicum]
Solyc11g028170.2.1	3388	539.288338640855	162.675907146797	-1.72905623910893	3.1728555100822e-08	Down	2.81829233656101e-09	NA	NA	NA	K06671//cohesin complex subunit SA-1/2;K13146//integrator complex subunit 9	gi|723683807|ref|XP_010318306.1|//PREDICTED: integrator complex subunit 9 homolog isoform X1 [Solanum lycopersicum];gi|698518244|ref|XP_009804002.1|//PREDICTED: uncharacterized protein LOC104249305 isoform X1 [Nicotiana sylvestris]
Solyc04g078290.3.1	3298	1079.9042010366	9566.68634337592	3.14711596269366	2.63486432637367e-05	Up	4.09156283870311e-06	NA	GO:0005506//iron ion binding;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K00517;K20618//null	gi|970022956|ref|XP_015072812.1|//PREDICTED: uncharacterized protein LOC107017045 [Solanum pennellii]
Solyc06g063020.3.1	1859	163.385508471099	424.209456285931	1.37649675226528	2.82682652922153e-05	Up	4.41072605163311e-06	NA	NA	NA	K11517//(S)-2-hydroxy-acid oxidase [EC:1.1.3.15]	gi|970033215|ref|XP_015077911.1|//PREDICTED: zinc finger CCCH domain-containing protein 62-like isoform X2 [Solanum pennellii];gi|460392557|ref|XP_004241882.1|//PREDICTED: zinc finger CCCH domain-containing protein 62-like [Solanum lycopersicum]
Solyc04g049850.3.1	1683	956.446415682208	224.404890466334	-2.0915800277295	2.23988389425195e-12	Down	1.05281556234222e-13	NA	NA	NA	NA	gi|460383638|ref|XP_004237526.1|//PREDICTED: sporulation protein RMD1 [Solanum lycopersicum]
Solyc06g030490.3.1	1399	512.657322645128	1325.9381823073	1.37094680857272	0.000834192923706859	Up	0.000181900574164497	NA	GO:0043169//cation binding;GO:0046872//metal ion binding;GO:0004721//phosphoprotein phosphatase activity;GO:0016791//phosphatase activity	GO:0006470//protein dephosphorylation	K06269//serine/threonine-protein phosphatase PP1 catalytic subunit [EC:3.1.3.16]	gi|460390304|ref|XP_004240775.1|//PREDICTED: serine/threonine-protein phosphatase PP1 isozyme 3 [Solanum lycopersicum];gi|976922624|gb|KVI06999.1|//Metallophosphoesterase domain-containing protein [Cynara cardunculus var. scolymus]
Solyc08g016440.3.1	989	267.49260885755	2723.96700404567	3.34813829402544	1.23728851702758e-09	Up	8.89180058457276e-11	NA	NA	NA	NA	NA
Solyc06g063060.3.1	752	54.4574925583929	696.941322691713	3.67783473539569	1.02152773055995e-06	Up	1.20361158353213e-07	NA	NA	NA	NA	gi|460392633|ref|XP_004241920.1|//PREDICTED: auxin-repressed 12.5 kDa protein [Solanum lycopersicum]
Solyc12g013700.2.1	1571	27.7628250046412	213.554866652929	2.94338049375338	0.0307928910048251	Up	0.0106078685949975	NA	NA	NA	K00218//protochlorophyllide reductase [EC:1.3.1.33];K13783//MFS transporter, OPA family, solute carrier family 37 (glycerol-3-phosphate transporter), member 1/2	gi|460412934|ref|XP_004251851.1|//PREDICTED: stem-specific protein TSJT1 [Solanum lycopersicum]
Solyc02g092480.3.1	3797	1057.7797537063	397.173989988867	-1.41319621474997	5.30828572302234e-05	Down	8.74161559725388e-06	NA	NA	NA	K10523//speckle-type POZ protein;K15095//(+)-neomenthol dehydrogenase [EC:1.1.1.208]	gi|723669539|ref|XP_010316013.1|//PREDICTED: BTB/POZ domain-containing protein NPY3-like isoform X2 [Solanum lycopersicum];gi|460372191|ref|XP_004231915.1|//PREDICTED: BTB/POZ domain-containing protein NPY3-like isoform X1 [Solanum lycopersicum]
Solyc03g123860.3.1	3628	64.5236025413038	1751.72387229319	4.7628045771336	6.81439486344721e-15	Up	2.23268714960866e-16	GO:0016020//membrane	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process	K17422//large subunit ribosomal protein L41;K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|460379523|ref|XP_004235511.1|//PREDICTED: receptor-like protein kinase [Solanum lycopersicum]
Solyc03g118440.2.1	1081	3.44107411751412	15.8080724918515	2.19973059606527	0.0360106966538027	Up	0.012710831360525	NA	NA	NA	NA	gi|460380148|ref|XP_004235820.1|//PREDICTED: uncharacterized protein LOC101258544 [Solanum lycopersicum]
Solyc09g010410.3.1	3476	606.181772093138	2222.74584008334	1.8745206168056	0.00013185595180356	Up	2.37191301403005e-05	NA	NA	NA	K00620//glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1]	gi|460401922|ref|XP_004246464.1|//PREDICTED: uncharacterized protein LOC101265360 [Solanum lycopersicum]
Solyc11g007370.2.1	3055	198.368380330687	1001.53799125772	2.33596316242431	0.00246332871048677	Up	0.000603436569454266	NA	NA	NA	K13080//flavanone 7-O-glucoside 2''-O-beta-L-rhamnosyltransferase [EC:2.4.1.236];K12937//cyanidin-3-O-glucoside 2''-O-glucuronosyltransferase [EC:2.4.1.254]	gi|460410126|ref|XP_004250482.1|//PREDICTED: crocetin glucoside glucosyltransferase-like [Solanum lycopersicum]
Solyc04g040200.3.1	3394	3420.88968337255	1696.52147864415	-1.01179188565645	0.000208894169047477	Down	3.94849534530995e-05	GO:0009536//plastid	GO:0016491//oxidoreductase activity	GO:0016109//tetraterpenoid biosynthetic process	K06443//lycopene beta-cyclase [EC:5.5.1.19]	gi|350539627|ref|NP_001234226.1|//lycopene beta cyclase, chloroplastic [Solanum lycopersicum]
Solyc02g091870.3.1	1356	13.0073265234315	61.5829056930837	2.24320547384059	1.57399941044113e-05	Up	2.32978666276343e-06	GO:0032991//macromolecular complex;GO:0015630//microtubule cytoskeleton	GO:0032561//guanyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity	GO:0007017//microtubule-based process;GO:0009207//purine ribonucleoside triphosphate catabolic process;GO:0043623//cellular protein complex assembly	K07374//tubulin alpha	gi|970007075|ref|XP_015064405.1|//PREDICTED: tubulin alpha-3 chain-like [Solanum pennellii]
Solyc06g062930.1.1	381	1.46745148193374	19.7582124571177	3.75106772124782	0.000989849565318757	Up	0.000219716496252915	NA	NA	NA	NA	gi|723710103|ref|XP_010322826.1|//PREDICTED: uncharacterized protein LOC104648074 [Solanum lycopersicum]
Solyc07g008390.2.1	1827	157.697597059033	16.1630354639568	-3.28639060613944	0.0141900066271307	Down	0.00434088953290821	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13065//shikimate O-hydroxycinnamoyltransferase [EC:2.3.1.133];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|723712894|ref|XP_010323318.1|//PREDICTED: salutaridinol 7-O-acetyltransferase-like [Solanum lycopersicum]
Solyc01g105680.3.1	4074	1446.80950304687	144.71005880748	-3.32163786684677	2.0837371319645e-31	Down	1.36699618020632e-33	NA	GO:0060089//molecular transducer activity	GO:0009314//response to radiation;GO:0023052//signaling	K10523//speckle-type POZ protein;K15095//(+)-neomenthol dehydrogenase [EC:1.1.1.208]	gi|460369400|ref|XP_004230550.1|//PREDICTED: root phototropism protein 3-like [Solanum lycopersicum]
Solyc02g062250.3.1	2057	621.290090470442	1433.84506368884	1.20655019115304	6.85996895603847e-06	Up	9.45073999609296e-07	GO:0016020//membrane	GO:0016859//cis-trans isomerase activity;GO:0005488//binding	GO:0044267//cellular protein metabolic process;GO:0007049//cell cycle	K09578//peptidyl-prolyl cis-trans isomerase NIMA-interacting 1 [EC:5.2.1.8]	gi|460375517|ref|XP_004233552.1|//PREDICTED: peptidyl-prolyl cis-trans isomerase Pin1-like [Solanum lycopersicum]
Solyc04g016160.3.1	4393	134.359395738274	643.034264023048	2.25879840108742	1.6163901668366e-09	Up	1.18270981716872e-10	NA	NA	NA	K18134//protein O-GlcNAc transferase [EC:2.4.1.255]	gi|723688818|ref|XP_004236597.2|//PREDICTED: F-box/LRR-repeat protein At5g63520-like [Solanum lycopersicum];gi|460381731|ref|XP_004236596.1|//PREDICTED: EGF domain-specific O-linked N-acetylglucosamine transferase-like [Solanum lycopersicum]
Solyc04g074480.3.1	2080	6118.42816777146	50571.8948839643	3.04710286059904	7.00618470477074e-10	Up	4.85220336270465e-11	GO:0009536//plastid	GO:0016765//transferase activity, transferring alkyl or aryl (other than methyl) groups	GO:0008652//cellular amino acid biosynthetic process	K01626//3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]	gi|350534836|ref|NP_001234418.1|//phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic [Solanum lycopersicum]
Solyc10g085285.1.1	1564	89.5106395044861	6.41090197083108	-3.80345992191623	0.000262699891012602	Down	5.07225822068466e-05	NA	NA	NA	K04628//2-hydroxyacylsphingosine 1-beta-galactosyltransferase [EC:2.4.1.45];K00699//glucuronosyltransferase [EC:2.4.1.17]	gi|460408446|ref|XP_004249656.1|//PREDICTED: UDP-glucose iridoid glucosyltransferase-like [Solanum lycopersicum]
Solyc03g098460.3.1	1775	1170.76365049211	296.921104390124	-1.9792983140622	1.16542712191643e-07	Down	1.14944094401032e-08	NA	GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	GO:0008152//metabolic process	K11153//retinol dehydrogenase 12 [EC:1.1.1.300];K11162//retinol dehydrogenase 14 [EC:1.1.1.-]	gi|1000814550|ref|NP_001307363.1|//retinol dehydrogenase 12 [Solanum lycopersicum]
Solyc03g115790.1.1	1659	14.2523303714049	50.1984323457173	1.8164444798582	0.000534533484135377	Up	0.000110760087904747	NA	NA	NA	K19589//release factor glutamine methyltransferase [EC:2.1.1.297];K03798//cell division protease FtsH [EC:3.4.24.-]	gi|460381480|ref|XP_004236477.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Solanum lycopersicum]
Solyc02g088220.3.1	3205	272.236932471964	716.108937012188	1.3953162716129	8.22545697622491e-07	Up	9.44327101788159e-08	NA	NA	NA	NA	gi|460372793|ref|XP_004232209.1|//PREDICTED: phosphate transporter PHO1 homolog 9 [Solanum lycopersicum]
Solyc11g062400.2.1	1940	93.1174173933462	442.939118310394	2.24998546408241	0.000316777489887464	Up	6.22844236302744e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460410963|ref|XP_004250884.1|//PREDICTED: protein kinase 2B, chloroplastic isoform X1 [Solanum lycopersicum];gi|723744606|ref|XP_010313224.1|//PREDICTED: protein kinase 2B, chloroplastic isoform X2 [Solanum lycopersicum]
Solyc06g074720.3.1	1276	2289.46518567222	6723.16089229974	1.55412904808614	0.000219517718542679	Up	4.16484712756164e-05	NA	GO:0000166//nucleotide binding;GO:0003676//nucleic acid binding	NA	K14838//nucleolar protein 15	gi|460391377|ref|XP_004241297.1|//PREDICTED: uncharacterized RNA-binding protein C1827.05c [Solanum lycopersicum]
Solyc08g081160.3.1	2901	1547.97044381748	258.61481503881	-2.5815010966128	5.09313191069776e-07	Down	5.61748073794344e-08	NA	NA	NA	NA	gi|460400149|ref|XP_004245598.1|//PREDICTED: uncharacterized protein LOC101256207 [Solanum lycopersicum]
Solyc12g010720.1.1	441	39.1361298356544	7.65241910522137	-2.35451330116648	0.00577412006574792	Down	0.00157546439843726	NA	NA	NA	K02335//DNA polymerase I [EC:2.7.7.7];K20729	gi|723748242|ref|XP_010313853.1|//PREDICTED: protein EPIDERMAL PATTERNING FACTOR 1 [Solanum lycopersicum]
Solyc01g068460.3.1	2691	362.160283204557	958.068464858227	1.40350041670178	0.00308670656237764	Up	0.000777314355726231	NA	NA	NA	K20478//golgin subfamily B member 1	gi|460366578|ref|XP_004229158.1|//PREDICTED: midasin [Solanum lycopersicum]
Solyc06g005950.3.1	3247	2662.16021652257	681.072013269486	-1.9667181444044	1.29146596170561e-05	Down	1.87355953591704e-06	NA	NA	NA	K03798//cell division protease FtsH [EC:3.4.24.-]	gi|460389506|ref|XP_004240393.1|//PREDICTED: ATP-dependent zinc metalloprotease FTSH 9, chloroplastic [Solanum lycopersicum]
Solyc04g007620.1.1	450	4.93806747520859	38.0347128310728	2.9452982573451	0.000324895391496935	Up	6.40570246475397e-05	NA	NA	NA	NA	gi|970022177|ref|XP_015072366.1|//PREDICTED: uncharacterized protein LOC107016402 [Solanum pennellii]
Solyc01g100040.3.1	1537	2387.21837792942	7158.41927328214	1.58431049852453	3.04534162484422e-05	Up	4.78267233055636e-06	NA	GO:0016791//phosphatase activity	NA	K10147//protein phosphatase 1D [EC:3.1.3.16];K19704//protein phosphatase PTC1 [EC:3.1.3.16];K17506//protein phosphatase 1L [EC:3.1.3.16];K19477//cGMP-dependent protein kinase 2 [EC:2.7.11.12]	gi|460368831|ref|XP_004230268.1|//PREDICTED: probable protein phosphatase 2C 34 [Solanum lycopersicum]
Solyc03g093120.4.1	2399	181.415788544367	1052.33207479827	2.53621811091955	0.000166174648825011	Up	3.07102247232148e-05	GO:0048046//apoplast;GO:0005618//cell wall;GO:0030312//external encapsulating structure;GO:0005576//extracellular region	GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0016762//xyloglucan:xyloglucosyl transferase activity;GO:0016758//transferase activity, transferring hexosyl groups;GO:0016798//hydrolase activity, acting on glycosyl bonds	GO:0010411//xyloglucan metabolic process;GO:0042546//cell wall biogenesis;GO:0071555//cell wall organization;GO:0044042//glucan metabolic process	K08235//xyloglucan:xyloglucosyl transferase [EC:2.4.1.207]	gi|460378804|ref|XP_004235158.1|//PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 23 [Solanum lycopersicum];gi|460378800|ref|XP_004235156.1|//PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 23 [Solanum lycopersicum]
Solyc03g114530.3.1	1555	107.531385138167	6.7804507046885	-3.98723281560139	0.000292353287805426	Down	5.6992981035574e-05	NA	NA	NA	K01757//strictosidine synthase [EC:4.3.3.2]	gi|460380695|ref|XP_004236090.1|//PREDICTED: strictosidine synthase 3-like [Solanum lycopersicum]
Solyc04g077120.3.1	3342	6507.81663249684	1095.10880884508	-2.5710993798934	1.64778474706682e-05	Down	2.4512855693841e-06	NA	NA	NA	K00913//inositol-1,3,4-trisphosphate 5/6-kinase / inositol-tetrakisphosphate 1-kinase [EC:2.7.1.159 2.7.1.134]	gi|460384703|ref|XP_004238049.1|//PREDICTED: inositol-tetrakisphosphate 1-kinase 2 isoform X2 [Solanum lycopersicum]
Solyc08g076720.3.1	4130	920.849299442912	413.627564247284	-1.15463274257361	0.000184931507468278	Down	3.44799239733237e-05	GO:0031224//intrinsic component of membrane	GO:0015405//P-P-bond-hydrolysis-driven transmembrane transporter activity;GO:0032559//adenyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity	GO:0006810//transport;GO:0009207//purine ribonucleoside triphosphate catabolic process	K05658//ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:3.6.3.44]	gi|723725582|ref|XP_004245909.2|//PREDICTED: ABC transporter B family member 2-like [Solanum lycopersicum]
Solyc03g051810.3.1	1667	3536.0117717256	657.594760481422	-2.42685236839385	6.87029049762198e-23	Down	9.55202905774936e-25	NA	NA	NA	K12501//homogentisate solanesyltransferase [EC:2.5.1.117]	gi|460377953|ref|XP_004234750.1|//PREDICTED: homogentisate solanesyltransferase, chloroplastic [Solanum lycopersicum]
Solyc04g071480.1.1	1167	1992.92777487225	5171.00694439595	1.37555581546335	0.000980320897491741	Up	0.00021749179893659	NA	NA	NA	NA	gi|460384186|ref|XP_004237794.1|//PREDICTED: uncharacterized protein LOC101243886 [Solanum lycopersicum]
Solyc06g082980.3.1	1204	5736.20758049927	1797.36007034987	-1.67421777580657	0.00414006968573694	Down	0.00108177607339406	GO:0043231//intracellular membrane-bounded organelle;GO:0031224//intrinsic component of membrane	GO:0016863//intramolecular oxidoreductase activity, transposing C=C bonds	GO:0006066//alcohol metabolic process	K01824//cholestenol Delta-isomerase [EC:5.3.3.5]	gi|460393696|ref|XP_004242445.1|//PREDICTED: probable 3-beta-hydroxysteroid-Delta(8),Delta(7)-isomerase [Solanum lycopersicum]
Solyc07g014660.2.1	489	0.414461964302784	10.012338703641	4.59439548127487	0.00289382268604344	Up	0.000722290189985498	NA	NA	NA	K14682//amino-acid N-acetyltransferase [EC:2.3.1.1]	gi|460394949|ref|XP_004243052.1|//PREDICTED: dirigent protein 17-like [Solanum lycopersicum]
Solyc03g095850.1.1	1782	1.03324500886651	41.7193804970171	5.33546343518367	0.000495341584589516	Up	0.000101919097470334	NA	NA	NA	K15502//serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A;K01599//uroporphyrinogen decarboxylase [EC:4.1.1.37]	gi|723683400|ref|XP_004235235.2|//PREDICTED: peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A-like [Solanum lycopersicum]
BGI_novel_G000254	1349	0.375959551559156	7.75474287173006	4.3664295859983	0.00531994381985877	Up	0.00143349760972711	NA	NA	NA	NA	gi|723749624|ref|XP_010314114.1|//PREDICTED: uncharacterized protein LOC104644940 [Solanum lycopersicum]
Solyc12g042910.2.1	2411	510.807521943669	29.9070866351749	-4.09422048581873	6.84939400813632e-27	Down	6.38269159845713e-29	NA	NA	NA	K02295//cryptochrome	gi|460413920|ref|XP_004252323.1|//PREDICTED: (6-4)DNA photolyase [Solanum lycopersicum]
Solyc07g052480.3.1	3041	2302.78289926801	5279.64276451839	1.19706191229445	0.0042033121529527	Up	0.00110143448767174	GO:0005777//peroxisome	GO:0016833//oxo-acid-lyase activity	GO:0044262//cellular carbohydrate metabolic process;GO:0043436//oxoacid metabolic process;GO:0009060//aerobic respiration	K01637//isocitrate lyase [EC:4.1.3.1]	gi|922959962|ref|NP_001233878.2|//isocitrate lyase [Solanum lycopersicum]
Solyc01g111640.3.1	653	35.8144043874652	345.231990356405	3.26895430110306	2.36351079203414e-12	Up	1.11356703486326e-13	NA	NA	NA	K03094//S-phase kinase-associated protein 1	gi|460370415|ref|XP_004231048.1|//PREDICTED: SKP1-like protein 1A [Solanum lycopersicum]
Solyc02g094280.3.1	2392	1905.28963752503	4030.16085754649	1.08082709340828	0.00159776824282214	Up	0.000372445018411107	GO:0031090//organelle membrane;GO:0016021//integral component of membrane	GO:0015197//peptide transporter activity	GO:0006810//transport;GO:0055085//transmembrane transport	K01807//ribose 5-phosphate isomerase A [EC:5.3.1.6]	gi|359488466|ref|XP_002274559.2|//PREDICTED: probable metal-nicotianamine transporter YSL6 [Vitis vinifera];gi|460371879|ref|XP_004231762.1|//PREDICTED: probable metal-nicotianamine transporter YSL6 [Solanum lycopersicum]
Solyc06g060590.3.1	1167	115.31380047124	3.97635940056735	-4.85797321146778	8.35247816757946e-07	Down	9.62957170580113e-08	NA	NA	NA	K15382//solute carrier family 50 (sugar transporter)	gi|460392816|ref|XP_004242009.1|//PREDICTED: bidirectional sugar transporter SWEET1-like [Solanum lycopersicum]
Solyc11g008890.2.1	1746	1588.91720584711	4046.79552680327	1.34873600379463	9.74919979800471e-06	Up	1.38381365852102e-06	NA	NA	NA	NA	gi|970064266|ref|XP_015059087.1|//PREDICTED: GDT1-like protein 3 [Solanum pennellii]
Solyc10g079890.2.1	1495	1567.31030244297	4832.85033709953	1.62458347962077	2.71555461936046e-06	Up	3.46884064430755e-07	NA	GO:0046872//metal ion binding	NA	K13448//calcium-binding protein CML	gi|970059068|ref|XP_015056260.1|//PREDICTED: probable calcium-binding protein CML49 [Solanum pennellii]
Solyc09g083210.3.1	1983	1320.55606306186	3875.7925956586	1.5533458190603	0.044222169313378	Up	0.0161951250001468	NA	GO:0004672//protein kinase activity	GO:0043170//macromolecule metabolic process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460404327|ref|XP_004247634.1|//PREDICTED: protein LYK5-like [Solanum lycopersicum]
Solyc10g079810.1.1	243	15.1386788189219	281.732870426312	4.21801668689331	5.43569412384466e-10	Up	3.69970831599089e-11	NA	NA	NA	NA	NA
Solyc04g077810.1.1	741	2.7715344585415	129.652804666718	5.54782466008281	3.54484970068934e-18	Up	7.90152125023195e-20	NA	NA	NA	NA	gi|970023119|ref|XP_015072894.1|//PREDICTED: uncharacterized protein LOC107017136 [Solanum pennellii]
Solyc06g007870.3.1	1192	236.386438145641	607.886254513081	1.36265412876991	1.71885704321316e-05	Up	2.56214004614933e-06	NA	GO:0008270//zinc ion binding	NA	K15505//DNA repair protein RAD5 [EC:3.6.4.-];K15691//E3 ubiquitin-protein ligase RFWD3 [EC:2.3.2.27];K15711//SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:3.6.4.- 2.3.2.27]	gi|460389634|ref|XP_004240456.1|//PREDICTED: E3 ubiquitin-protein ligase RNF4 [Solanum lycopersicum]
Solyc07g032490.3.1	2796	1445.04434783442	12.8527243984625	-6.812895758286	1.3166102747545e-27	Down	1.13365503752903e-29	GO:0031224//intrinsic component of membrane;GO:0016021//integral component of membrane	GO:0005215//transporter activity	GO:0006857//oligopeptide transport;GO:0015833//peptide transport	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460395161|ref|XP_004243154.1|//PREDICTED: protein NRT1/ PTR FAMILY 6.2-like [Solanum lycopersicum]
Solyc12g041980.2.1	1329	720.866424207007	183.377486457881	-1.97491542648373	1.7116445163283e-08	Down	1.45529340306577e-09	GO:0031436//BRCA1-BARD1 complex;GO:0005886//plasma membrane;GO:0070531//BRCA1-A complex	GO:0008270//zinc ion binding;GO:0004842//ubiquitin-protein transferase activity	GO:0016567//protein ubiquitination;GO:0042127//regulation of cell proliferation;GO:0035067//negative regulation of histone acetylation;GO:0071158//positive regulation of cell cycle arrest;GO:0045944//positive regulation of transcription from RNA polymerase II promoter;GO:0045717//negative regulation of fatty acid biosynthetic process;GO:0035066//positive regulation of histone acetylation;GO:0000724//double-strand break repair via homologous recombination	K10683//BRCA1-associated RING domain protein 1	gi|565370035|ref|XP_006351634.1|//PREDICTED: BRCA1-associated RING domain protein 1-like [Solanum tuberosum];gi|970027203|ref|XP_015074908.1|//PREDICTED: BRCA1-associated RING domain protein 1-like [Solanum pennellii]
Solyc02g084400.3.1	3708	694.391361558319	68.5857927356852	-3.33976733619803	3.07271686482366e-19	Down	6.17338001394049e-21	NA	NA	NA	K08869//aarF domain-containing kinase	gi|460373314|ref|XP_004232465.1|//PREDICTED: probable serine/threonine-protein kinase abkC [Solanum lycopersicum]
Solyc01g099620.3.1	2983	1.11000729945988	26.8072594335009	4.59398266794701	3.1945874622108e-05	Up	5.04554444814229e-06	GO:0031224//intrinsic component of membrane	GO:0016209//antioxidant activity;GO:0050664//oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor;GO:0046914//transition metal ion binding;GO:0050662//coenzyme binding	GO:0008152//metabolic process	K13447//respiratory burst oxidase [EC:1.6.3.- 1.11.1.-]	gi|460368758|ref|XP_004230232.1|//PREDICTED: respiratory burst oxidase homolog protein B [Solanum lycopersicum]
Solyc06g075320.3.1	1398	11.9123087744466	63.5216114542756	2.41479445702741	4.83594906083225e-05	Up	7.87725413591656e-06	NA	NA	NA	NA	gi|460391314|ref|XP_004241268.1|//PREDICTED: vicilin-like antimicrobial peptides 2-3 [Solanum lycopersicum]
Solyc03g098220.3.1	1907	1357.09402078335	6542.61641319419	2.26934701394332	5.6727580261795e-12	Up	2.82496075852684e-13	NA	GO:0016740//transferase activity;GO:0048037//cofactor binding	GO:0008152//metabolic process	K00654//serine palmitoyltransferase [EC:2.3.1.50]	gi|460379265|ref|XP_004235384.1|//PREDICTED: long chain base biosynthesis protein 2b [Solanum lycopersicum]
Solyc01g009810.3.1	1527	44.0342876979756	380.221214305344	3.11013979483683	0.000114583783766666	Up	2.03344786981176e-05	NA	GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K13418//somatic embryogenesis receptor kinase 1 [EC:2.7.10.1 2.7.11.1];K13416//brassinosteroid insensitive 1-associated receptor kinase 1 [EC:2.7.10.1 2.7.11.1]	gi|460365087|ref|XP_004228437.1|//PREDICTED: somatic embryogenesis receptor kinase 2-like [Solanum lycopersicum]
Solyc10g051200.2.1	2258	2528.49647236932	481.104712268899	-2.39385693034646	1.91514957587648e-07	Down	1.96240725513808e-08	NA	NA	GO:0043623//cellular protein complex assembly	K07399//cytochrome c biogenesis protein	gi|856116676|ref|NP_001297058.1|//cytochrome c biogenesis protein CCS1, chloroplastic [Solanum lycopersicum]
Solyc02g080880.3.1	2049	655.953014943019	1819.8430333652	1.47214963394485	3.14966711601243e-06	Up	4.06798738518826e-07	GO:0043231//intracellular membrane-bounded organelle	GO:0004175//endopeptidase activity	GO:0019538//protein metabolic process	K08245//phytepsin [EC:3.4.23.40]	gi|697156599|ref|XP_009587050.1|//PREDICTED: aspartic proteinase-like [Nicotiana tomentosiformis];gi|970011197|ref|XP_015066503.1|//PREDICTED: aspartic proteinase isoform X1 [Solanum pennellii]
Solyc04g007530.3.1	1869	495.295589248648	135.527948271708	-1.86969938179232	0.000198819122983789	Down	3.73730742957823e-05	NA	NA	NA	K03327//multidrug resistance protein, MATE family	gi|460382512|ref|XP_004236983.1|//PREDICTED: MATE efflux family protein 5 [Solanum lycopersicum]
Solyc01g111440.3.1	1770	1290.73468348419	17964.1468114743	3.79885603410352	5.52595620311317e-16	Up	1.59426349381601e-17	NA	NA	NA	K19366//spartin	gi|460370383|ref|XP_004231032.1|//PREDICTED: uncharacterized protein LOC101263355 [Solanum lycopersicum]
Solyc08g074682.1.1	1776	22.4057750317981	4423.72044480898	7.62524577650142	1.20746103707387e-26	Up	1.15219183498923e-28	GO:0009534//chloroplast thylakoid	GO:0043169//cation binding;GO:0016682//oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor	GO:0008152//metabolic process	K00422//polyphenol oxidase [EC:1.10.3.1]	gi|460401025|ref|XP_004246030.1|//PREDICTED: polyphenol oxidase D, chloroplastic [Solanum lycopersicum]
Solyc09g009290.3.1	1877	1162.02005452551	383.895786506108	-1.59784833655105	7.25930755474554e-05	Down	1.22846489855915e-05	NA	NA	NA	K12897//transformer-2 protein	gi|460402098|ref|XP_004246551.1|//PREDICTED: ankyrin repeat domain-containing protein EMB506, chloroplastic [Solanum lycopersicum]
Solyc02g085780.3.1	3617	1729.32236663083	512.227771736891	-1.75534945031122	1.97628760993356e-12	Down	9.18603939759636e-14	NA	NA	NA	K10615//E3 ubiquitin-protein ligase HERC4 [EC:2.3.2.26]	gi|460373125|ref|XP_004232373.1|//PREDICTED: ultraviolet-B receptor UVR8-like [Solanum lycopersicum]
Solyc09g011650.3.1	1079	142.078773314134	641.917411471246	2.17569666256241	3.34678876639514e-07	Up	3.57908102004432e-08	NA	NA	NA	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|460401746|ref|XP_004246378.1|//PREDICTED: glutathione S-transferase U8 [Solanum lycopersicum]
Solyc03g118430.3.1	4704	8061.01239141033	2239.45080174692	-1.84781606765868	2.77416508458054e-11	Down	1.54487946785572e-12	NA	GO:0004175//endopeptidase activity;GO:0046914//transition metal ion binding	GO:0019538//protein metabolic process	K01408//insulysin [EC:3.4.24.56];K17732//mitochondrial-processing peptidase subunit beta [EC:3.4.24.64];K07263//zinc protease [EC:3.4.24.-]	gi|565349017|ref|XP_006341495.1|//PREDICTED: uncharacterized protein LOC102586437 isoform X1 [Solanum tuberosum];gi|723685964|ref|XP_010318661.1|//PREDICTED: uncharacterized protein LOC101262797 isoform X2 [Solanum lycopersicum]
Solyc02g062340.3.1	1586	91321.5213586552	3989.29184666716	-4.51675031776894	3.68553730188616e-41	Down	1.05779921069492e-43	NA	GO:0016832//aldehyde-lyase activity	GO:0006007//glucose catabolic process	K01623//fructose-bisphosphate aldolase, class I [EC:4.1.2.13]	gi|460375513|ref|XP_004233550.1|//PREDICTED: fructose-bisphosphate aldolase 1, chloroplastic-like [Solanum lycopersicum]
Solyc02g070770.3.1	1268	1416.88305729819	432.575871562409	-1.71169558879401	5.35789070974059e-09	Down	4.24389360302622e-10	NA	NA	NA	K01256//aminopeptidase N [EC:3.4.11.2];K19073//divinyl chlorophyllide a 8-vinyl-reductase [EC:1.3.1.75];K08956//AFG3 family protein [EC:3.4.24.-]	gi|460374618|ref|XP_004233107.1|//PREDICTED: uncharacterized protein At2g34460, chloroplastic [Solanum lycopersicum]
Solyc04g076940.3.1	3988	333.822773133508	125.03330308759	-1.41676996431854	0.000292048098783057	Down	5.69117138973394e-05	NA	NA	NA	K17616//CTD small phosphatase-like protein 2 [EC:3.1.3.-]	gi|970010612|ref|XP_015066202.1|//PREDICTED: CTD small phosphatase-like protein 2 [Solanum pennellii];gi|565398830|ref|XP_006364967.1|//PREDICTED: Werner Syndrome-like exonuclease [Solanum tuberosum]
Solyc10g047530.2.1	2691	102.618791772367	6.3671389200716	-4.01050589260868	4.31847071734263e-05	Down	6.96994863802505e-06	NA	GO:0060089//molecular transducer activity	GO:0009314//response to radiation;GO:0023052//signaling	K10523//speckle-type POZ protein	gi|460406690|ref|XP_004248794.1|//PREDICTED: root phototropism protein 3-like [Solanum lycopersicum]
Solyc01g102500.3.1	1740	725.085632784066	1480.46652568209	1.029828577678	0.00143560330742432	Up	0.000330379261221028	NA	NA	NA	NA	gi|460369057|ref|XP_004230381.1|//PREDICTED: uncharacterized protein LOC101245888 [Solanum lycopersicum]
Solyc04g082040.3.1	3058	431.53575893762	165.693943801122	-1.38095924009221	0.000160662807212852	Down	2.96017689001463e-05	NA	NA	NA	NA	gi|460385876|ref|XP_004238626.1|//PREDICTED: mechanosensitive ion channel protein 8-like [Solanum lycopersicum]
Solyc08g066660.1.1	657	58.8836085982588	142.336115753639	1.27336377881485	0.0136655737913699	Up	0.00415855615151126	NA	NA	NA	K09286//EREBP-like factor	gi|460399275|ref|XP_004245167.1|//PREDICTED: dehydration-responsive element-binding protein 3-like [Solanum lycopersicum]
Solyc02g091060.1.1	2587	257.992326149195	545.218767853139	1.07950707027204	0.0186176217636106	Up	0.00592435653033933	NA	NA	NA	NA	NA
Solyc01g090200.3.1	2634	3266.25791039387	966.203302602952	-1.75724002434169	1.0076343506621e-06	Down	1.18498821244183e-07	GO:0044424//intracellular part	GO:0032559//adenyl ribonucleotide binding;GO:0004812//aminoacyl-tRNA ligase activity	GO:0006418//tRNA aminoacylation for protein translation	K14164//glycyl-tRNA synthetase [EC:6.1.1.14]	gi|460367768|ref|XP_004229742.1|//PREDICTED: glycine--tRNA ligase 2, chloroplastic/mitochondrial isoform X1 [Solanum lycopersicum];gi|971551586|ref|XP_015164507.1|//PREDICTED: glycine--tRNA ligase, chloroplastic/mitochondrial 2 isoform X2 [Solanum tuberosum]
Solyc10g039230.1.1	3759	58.4950004145889	205.542180530621	1.81304926080478	0.00134460183432532	Up	0.000307782908326815	NA	NA	NA	NA	gi|970028174|ref|XP_015075387.1|//PREDICTED: uncharacterized protein LOC107019387 [Solanum pennellii]
Solyc01g090430.3.1	3314	729.826491027408	2935.28125184125	2.00787332214509	0.000459881659638349	Up	9.38366243817943e-05	NA	GO:0032559//adenyl ribonucleotide binding	GO:0012501//programmed cell death;GO:0006950//response to stress	K13453;K13457//disease resistance protein RPM1	gi|350535589|ref|NP_001234202.1|//NRC1 [Solanum lycopersicum]
Solyc03g053027.1.1	2383	601.040062837505	175.197815420611	-1.77847637243348	3.38213185633162e-07	Down	3.62443308742858e-08	NA	NA	NA	K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6];K04508//transducin (beta)-like 1;K12606//CCR4-NOT transcription complex subunit 9;K12447//UDP-sugar pyrophosphorylase [EC:2.7.7.64];K01456//peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase [EC:3.5.1.52]	gi|970028460|ref|XP_015075544.1|//PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC107019641 [Solanum pennellii];gi|971564890|ref|XP_015167893.1|//PREDICTED: uncharacterized protein LOC107062130 [Solanum tuberosum];gi|698527353|ref|XP_009760520.1|//PREDICTED: ribonuclease 3-like protein 2 isoform X1 [Nicotiana sylvestris];gi|802563284|ref|XP_012066815.1|//PREDICTED: uncharacterized protein LOC105629785 [Jatropha curcas]
Solyc03g006910.3.1	1580	17.3187260187223	2.0629841765063	-3.06952814737987	0.0225278365903315	Down	0.00739619743132697	NA	NA	NA	K18486//heart-and neural crest derivatives-expressed protein 2	gi|460376722|ref|XP_004234146.1|//PREDICTED: transcription factor bHLH120-like [Solanum lycopersicum]
Solyc01g068190.3.1	744	798.329688789184	168.938424959004	-2.24048715821684	2.00270063330543e-13	Down	8.06216148788527e-15	NA	NA	NA	NA	gi|460366610|ref|XP_004229174.1|//PREDICTED: uncharacterized protein LOC101258592 [Solanum lycopersicum]
Solyc01g099880.3.1	1439	55.8971728019996	8.51648309916118	-2.71444562110817	0.000815597597778828	Down	0.000177268137492484	GO:0016020//membrane	NA	GO:0006810//transport	K15382//solute carrier family 50 (sugar transporter)	gi|460368805|ref|XP_004230255.1|//PREDICTED: bidirectional sugar transporter SWEET16-like [Solanum lycopersicum]
Solyc07g032230.3.1	4007	1255.60039220181	2987.35767901371	1.25049259848553	0.00285169471748202	Up	0.000710691474619233	NA	NA	NA	K19476//vacuolar protein sorting-associated protein IST1	gi|460395146|ref|XP_004243148.1|//PREDICTED: uncharacterized protein LOC101265657 [Solanum lycopersicum]
Solyc01g010000.3.1	1702	390.494089496935	39.3467734993014	-3.31098346964848	3.78979136356246e-20	Down	6.95751780990055e-22	NA	GO:0031406//carboxylic acid binding	NA	K00688//starch phosphorylase [EC:2.4.1.1]	gi|460365067|ref|XP_004228427.1|//PREDICTED: uncharacterized protein LOC101262744 [Solanum lycopersicum]
Solyc01g111250.3.1	1049	9.90344265792224	1610.20384500592	7.34509749825373	3.68023337841397e-33	Up	2.07140017944129e-35	NA	GO:0004620//phospholipase activity;GO:0042578//phosphoric ester hydrolase activity	GO:0007165//signal transduction;GO:0044238//primary metabolic process	K01771//1-phosphatidylinositol phosphodiesterase [EC:4.6.1.13]	gi|565387781|ref|XP_006359666.1|//PREDICTED: PI-PLC X-box domain-containing protein DDB_G0293730-like [Solanum tuberosum];gi|723666276|ref|XP_004231014.2|//PREDICTED: uncharacterized protein LOC101258705 [Solanum lycopersicum]
Solyc09g090360.3.1	4791	178.285321574338	1.05419858274768	-7.40189746132623	2.23404292143657e-11	Down	1.21994665271529e-12	NA	NA	NA	K17756//long-chain-alcohol oxidase [EC:1.1.3.20]	gi|460404554|ref|XP_004247746.1|//PREDICTED: phosphate transporter PHO1 [Solanum lycopersicum]
Solyc07g062680.2.1	2002	1153.0454950588	397.767269437014	-1.53545296472898	3.18598913595721e-05	Down	5.0305091620377e-06	NA	NA	NA	NA	gi|559098487|ref|NP_001234335.2|//cycloidea [Solanum lycopersicum]
Solyc01g005550.3.1	2066	2679.71828269777	498.24780537147	-2.42714598336008	0.0064936924365078	Down	0.00179818253730492	NA	NA	NA	K05609//ubiquitin carboxyl-terminal hydrolase L3 [EC:3.4.19.12]	gi|723656030|ref|XP_010316339.1|//PREDICTED: uncharacterized protein LOC101253614 [Solanum lycopersicum]
Solyc07g064550.3.1	3557	283.029663754311	581.412962958401	1.03860997073492	0.0209744605739914	Up	0.00680880338224581	NA	NA	NA	NA	gi|460397140|ref|XP_004244126.1|//PREDICTED: uncharacterized protein LOC101250136 [Solanum lycopersicum]
Solyc03g115370.3.1	2774	418.918076683545	4057.76386187539	3.27594486690324	1.90346384157919e-11	Up	1.02239876088997e-12	GO:0016021//integral component of membrane;GO:0005622//intracellular	GO:0004143//diacylglycerol kinase activity;GO:0005524//ATP binding	GO:0016310//phosphorylation;GO:0007205//protein kinase C-activating G-protein coupled receptor signaling pathway;GO:0035556//intracellular signal transduction	K00901//diacylglycerol kinase (ATP) [EC:2.7.1.107]	gi|460380460|ref|XP_004235974.1|//PREDICTED: diacylglycerol kinase 1-like isoform X1 [Solanum lycopersicum]
Solyc01g095770.3.1	5023	6.82827399830003	58.2603268395922	3.09292093930404	7.12598574847392e-07	Up	8.05617816278568e-08	NA	NA	NA	K05391//cyclic nucleotide gated channel, other eukaryote	gi|723661537|ref|XP_010327006.1|//PREDICTED: cyclic nucleotide-gated ion channel 1-like isoform X1 [Solanum lycopersicum]
Solyc11g027645.1.1	711	369.887648826942	1362.13076113301	1.8807061727438	0.0412189400821905	Up	0.0148863243796162	NA	NA	NA	NA	gi|947068971|gb|KRH17862.1|//hypothetical protein GLYMA_13G022700 [Glycine max]
Solyc08g078040.3.1	3410	1484.45364962772	22167.2836816605	3.90042804449639	1.06370435267435e-09	Up	7.56503617452908e-11	NA	GO:0016709//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	GO:0008152//metabolic process	K00480//salicylate hydroxylase [EC:1.14.13.1];K09838//zeaxanthin epoxidase [EC:1.14.13.90]	gi|460400583|ref|XP_004245813.1|//PREDICTED: LOW QUALITY PROTEIN: zeaxanthin epoxidase, chloroplastic-like [Solanum lycopersicum]
Solyc02g093830.3.1	1890	1142.57470069283	15042.69406398	3.71870257310314	6.74890530768188e-18	Up	1.55968439345563e-19	GO:0044424//intracellular part;GO:0005737//cytoplasm	GO:0050661//NADP binding;GO:0016616//oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;GO:0000166//nucleotide binding;GO:0004345//glucose-6-phosphate dehydrogenase activity	GO:0006006//glucose metabolic process;GO:0006098//pentose-phosphate shunt;GO:0055114//oxidation-reduction process;GO:0019318//hexose metabolic process	K00036//glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]	gi|460371960|ref|XP_004231802.1|//PREDICTED: glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform [Solanum lycopersicum]
Solyc04g081840.3.1	1184	0.76095415210346	13.6451560832776	4.16443555388657	0.00178471367443501	Up	0.000421165285256003	NA	NA	NA	NA	gi|460385874|ref|XP_004238625.1|//PREDICTED: UPF0496 protein At1g20180-like [Solanum lycopersicum]
Solyc01g099160.3.1	2882	455.525331934232	72.7489076317623	-2.64653379469978	0.000424044885845865	Down	8.58584993258811e-05	NA	GO:0016702//oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen;GO:0046914//transition metal ion binding	GO:0006633//fatty acid biosynthetic process	K15718//linoleate 9S-lipoxygenase [EC:1.13.11.58]	gi|350538669|ref|NP_001234098.1|//lipoxygenase [Solanum lycopersicum]
Solyc00g011880.3.1	863	204.358900351075	95.1577958222189	-1.10271131822867	0.0042125630367926	Down	0.00110417262840039	NA	NA	NA	NA	gi|460415875|ref|XP_004253279.1|//PREDICTED: AIG2-like protein [Solanum lycopersicum]
Solyc03g111720.3.1	906	786.829804265472	10079.893534038	3.679284984258	2.58933742558912e-24	Up	3.1367774836606e-26	NA	GO:0016671//oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor;GO:0008113//peptide-methionine (S)-S-oxide reductase activity	GO:0006979//response to oxidative stress;GO:0043170//macromolecule metabolic process;GO:0030091//protein repair;GO:0055114//oxidation-reduction process	K07304//peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]	gi|994314812|ref|NP_001307131.1|//peptide methionine sulfoxide reductase [Solanum lycopersicum]
Solyc01g091470.3.1	3082	3.1748068414362	51.7447862818698	4.02667278180059	6.94387301772334e-07	Up	7.83994012624273e-08	NA	NA	NA	NA	gi|460367930|ref|XP_004229823.1|//PREDICTED: putative DNA-binding protein ESCAROLA [Solanum lycopersicum]
Solyc03g119110.3.1	1306	1172.05383292747	262.950018666517	-2.1561783305279	0.00351373254568457	Down	0.000899912640576961	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial	gi|723685775|ref|XP_010318632.1|//PREDICTED: uncharacterized GPI-anchored protein At4g28100 [Solanum lycopersicum]
Solyc05g010060.3.1	2670	246.985275082473	53.9149509821275	-2.19566773020214	0.000239759261555439	Down	4.57926962952912e-05	GO:0016021//integral component of membrane;GO:0005886//plasma membrane;GO:0005802//trans-Golgi network	NA	GO:0006817//phosphate ion transport	K07024;K14514//ethylene-insensitive protein 3	gi|565363740|ref|XP_006348589.1|//PREDICTED: phosphate transporter PHO1 homolog 1 [Solanum tuberosum];gi|802679897|ref|XP_012081998.1|//PREDICTED: phosphate transporter PHO1 homolog 1 [Jatropha curcas]
Solyc06g053700.1.1	348	57.63575762151	290.354263711786	2.33277816697633	0.000124282394189512	Up	2.22163432176109e-05	NA	NA	NA	NA	gi|460390805|ref|XP_004241015.1|//PREDICTED: uncharacterized protein At4g14450, chloroplastic-like [Solanum lycopersicum]
Solyc05g056255.1.1	1580	2031.89967001315	806.577288664229	-1.33294447879326	2.92744246422086e-08	Down	2.58284490562501e-09	GO:0044424//intracellular part	GO:0003723//RNA binding;GO:0046872//metal ion binding;GO:0032559//adenyl ribonucleotide binding;GO:0004812//aminoacyl-tRNA ligase activity	GO:0006418//tRNA aminoacylation for protein translation	K01889//phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]	gi|723700976|ref|XP_004239652.2|//PREDICTED: phenylalanine--tRNA ligase, chloroplastic/mitochondrial, partial [Solanum lycopersicum]
Solyc12g008670.2.1	1456	2.44327026433546	39.7986738751709	4.02583499733942	1.40532025736667e-06	Up	1.69719607643805e-07	GO:0043231//intracellular membrane-bounded organelle	GO:0003676//nucleic acid binding	NA	K09422//myb proto-oncogene protein, plant	gi|460412530|ref|XP_004251651.1|//PREDICTED: transcription factor RAX1-like [Solanum lycopersicum]
Solyc03g113980.3.1	1790	0.675946516598332	1207.01855899495	10.8022511389181	1.78395046041544e-25	Up	1.88183234045613e-27	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723687421|ref|XP_004236137.2|//PREDICTED: uncharacterized protein LOC101255079 isoform X1 [Solanum lycopersicum]
Solyc11g006890.2.1	1132	49.9238993889836	12.1608197547598	-2.0374901392821	0.0142641640077921	Down	0.00436517021410366	NA	NA	NA	NA	gi|970061895|ref|XP_015057820.1|//PREDICTED: uncharacterized protein LOC107004101 [Solanum pennellii]
Solyc02g083390.3.1	1312	473.841344759165	1610.22927367471	1.76479013143122	2.05974294298633e-08	Up	1.77582578914842e-09	NA	GO:0016705//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen;GO:0019842//vitamin binding;GO:0046914//transition metal ion binding	GO:0019471//4-hydroxyproline metabolic process	K00472//prolyl 4-hydroxylase [EC:1.14.11.2]	gi|460373434|ref|XP_004232524.1|//PREDICTED: probable prolyl 4-hydroxylase 10 [Solanum lycopersicum]
Solyc01g049825.1.1	869	11.1166554955734	1.11615138387529	-3.31611819231058	0.014184348903928	Down	0.00433863005463072	GO:0043231//intracellular membrane-bounded organelle	GO:0000166//nucleotide binding;GO:0003774//motor activity	NA	K10406//kinesin family member C2/C3	gi|970056168|ref|XP_015089735.1|//PREDICTED: kinesin-like protein KIF22 [Solanum pennellii]
Solyc03g112210.1.1	279	132.959871755687	516.894753931543	1.95887966446401	2.87810763689312e-05	Up	4.49503168278745e-06	NA	NA	NA	NA	gi|823142489|ref|XP_012471044.1|//PREDICTED: uncharacterized protein LOC105788629 [Gossypium raimondii]
Solyc03g006960.3.1	2218	231.529750337874	94.1961074224541	-1.2974582360306	0.00290409844451117	Down	0.000725375118408728	NA	NA	NA	K14497//protein phosphatase 2C [EC:3.1.3.16]	gi|723679026|ref|XP_010317462.1|//PREDICTED: probable protein phosphatase 2C 75 isoform X1 [Solanum lycopersicum];gi|460376726|ref|XP_004234148.1|//PREDICTED: probable protein phosphatase 2C 75 isoform X2 [Solanum lycopersicum]
Solyc01g105190.3.1	4620	30.5438521533913	90.6102260326451	1.56879185369234	0.00245884968984532	Up	0.000602156048243766	NA	NA	NA	K17893//ubiquinol oxidase [EC:1.10.3.11]	gi|969996311|ref|XP_015062527.1|//PREDICTED: protein DA1-related 1-like [Solanum pennellii]
Solyc11g012700.2.1	2954	10277.7036545482	1140.00428618483	-3.17240680569353	1.95190284587025e-10	Down	1.23467240548748e-11	GO:0016021//integral component of membrane	NA	GO:0055085//transmembrane transport	K04773//protease IV [EC:3.4.21.-]	gi|661892300|emb|CDP04526.1|//unnamed protein product [Coffea canephora];gi|460409738|ref|XP_004250295.1|//PREDICTED: oligopeptide transporter 3 [Solanum lycopersicum]
Solyc00g012440.1.1	381	58.9813749001278	381.973995711564	2.69514306660996	0.0177009697746254	Up	0.00558582116117411	NA	NA	NA	NA	gi|970066912|ref|XP_015060514.1|//PREDICTED: uncharacterized protein LOC107006481 [Solanum pennellii]
Solyc02g091690.3.1	1259	39.0802923393556	6.9028872434026	-2.50116943580194	0.0241061043612746	Down	0.00800332009638708	NA	NA	NA	K16190//glucuronokinase [EC:2.7.1.43];K13422//transcription factor MYC2	gi|460372305|ref|XP_004231971.1|//PREDICTED: transcription factor bHLH93-like [Solanum lycopersicum]
Solyc03g121880.3.1	2331	2347.04085666766	6582.42303922434	1.48777579244586	4.89146711807966e-05	Up	7.98045011772577e-06	NA	GO:0046872//metal ion binding;GO:0004721//phosphoprotein phosphatase activity;GO:0004722//protein serine/threonine phosphatase activity	GO:0006470//protein dephosphorylation	K14497//protein phosphatase 2C [EC:3.1.3.16]	gi|930588892|ref|NP_001234686.2|//protein phosphatase 2C ABI2 homolog [Solanum lycopersicum]
Solyc01g096250.2.1	1224	629.148815067576	163.884445000958	-1.9407223755013	1.29654033793156e-05	Down	1.88237088722358e-06	NA	NA	NA	NA	gi|460368310|ref|XP_004230010.1|//PREDICTED: putative uncharacterized protein DDB_G0290521 [Solanum lycopersicum]
Solyc02g066910.3.1	1973	371.361838798343	121.655689322181	-1.61002178071721	2.19883492548169e-06	Down	2.75141227256674e-07	NA	NA	NA	K15285//solute carrier family 35, member E3;K15280//solute carrier family 35, member C2	gi|460375184|ref|XP_004233387.1|//PREDICTED: probable sugar phosphate/phosphate translocator At3g17430 [Solanum lycopersicum]
Solyc01g111937.1.1	2607	996.787671744707	359.685670086061	-1.47054954174116	0.00531648682183622	Down	0.00143236792709975	NA	GO:0005088//Ras guanyl-nucleotide exchange factor activity	NA	K10418//dynein light chain LC8-type;K20826	gi|460370465|ref|XP_004231073.1|//PREDICTED: rop guanine nucleotide exchange factor 1 [Solanum lycopersicum]
Solyc02g081600.3.1	1301	444.330630571796	32.2614901716558	-3.78374861520647	1.25946846545931e-10	Down	7.7038458022168e-12	NA	NA	NA	K14709//solute carrier family 39 (zinc transporter), member 1/2/3	gi|460373693|ref|XP_004232649.1|//PREDICTED: zinc transporter 3-like [Solanum lycopersicum]
Solyc01g008400.3.1	2620	20.773692813551	49.3966664060206	1.24965598493016	0.0318442664045904	Up	0.0110448374420275	NA	NA	NA	K01176//alpha-amylase [EC:3.2.1.1];K19589//release factor glutamine methyltransferase [EC:2.1.1.297];K00901//diacylglycerol kinase (ATP) [EC:2.7.1.107];K17710//pentatricopeptide repeat domain-containing protein 1;K10406//kinesin family member C2/C3	gi|970001085|ref|XP_015056521.1|//PREDICTED: putative pentatricopeptide repeat-containing protein At1g10330 [Solanum pennellii];gi|54397638|gb|AAV33690.1|//Hcr9-OR2B [Solanum pimpinellifolium]
Solyc02g092120.3.1	900	76.6189916997904	2439.57490409831	4.99278392973907	2.32463886713094e-32	Up	1.3777306540697e-34	NA	NA	NA	NA	gi|807201098|ref|NP_001293111.1|//phytosulfokines 2 precursor [Solanum lycopersicum]
Solyc03g006360.3.1	1710	3.89744598435106	129.338115272297	5.05247465393145	1.27938671409899e-07	Up	1.27089816351342e-08	NA	NA	NA	K03046//DNA-directed RNA polymerase subunit beta' [EC:2.7.7.6]	gi|460376654|ref|XP_004234112.1|//PREDICTED: auxin-repressed 12.5 kDa protein-like [Solanum lycopersicum]
Solyc06g066000.2.1	1622	24210.7867250679	4785.88168877015	-2.33879332247694	2.814059772629e-20	Down	5.01386823958798e-22	NA	NA	GO:0006810//transport	K02109//F-type H+-transporting ATPase subunit b	gi|723710913|ref|XP_010322981.1|//PREDICTED: uncharacterized protein LOC101262527 [Solanum lycopersicum]
Solyc08g082110.3.1	1446	484.70557893064	5527.27693997372	3.51138830645061	3.4427860890089e-05	Up	5.47832630609028e-06	NA	NA	NA	K13425//WRKY transcription factor 22;K13459//disease resistance protein RPS2;K16225//probable WRKY transcription factor 52	gi|460400013|ref|XP_004245530.1|//PREDICTED: probable WRKY transcription factor 53 [Solanum lycopersicum]
Solyc01g099020.3.1	1390	5637.21509962108	319.610958020399	-4.14059383980527	4.47112455301324e-50	Down	6.01379907611459e-53	NA	NA	NA	K21026	gi|460368680|ref|XP_004230193.1|//PREDICTED: acetylajmalan esterase [Solanum lycopersicum]
Solyc08g022170.1.1	408	183.449004801641	53.3923684927005	-1.78067362440326	3.14719528329817e-05	Down	4.96456330658933e-06	GO:0009534//chloroplast thylakoid	GO:0000166//nucleotide binding;GO:0048037//cofactor binding;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process;GO:0051234//establishment of localization	K05579//NAD(P)H-quinone oxidoreductase subunit H [EC:1.6.5.3]	gi|28261775|ref|NP_783288.1|//NADH dehydrogenase subunit 7 [Atropa belladonna]
Solyc11g006730.1.1	627	5.49133342058793	116.950684999781	4.41259999067416	2.11111607832616e-15	Up	6.49198883487058e-17	NA	NA	NA	K11426//SET and MYND domain-containing protein	gi|723740787|ref|XP_010312518.1|//PREDICTED: putative germin-like protein 9-2 [Solanum lycopersicum]
Solyc10g051140.2.1	1747	48.2376952834986	118.63550368894	1.29830294105137	0.00234940249753636	Up	0.000571675097059689	NA	NA	NA	NA	gi|723736354|ref|XP_010327441.1|//PREDICTED: uncharacterized protein LOC101265782 [Solanum lycopersicum]
Solyc07g006855.1.1	729	80.0224379828576	18.8246730267277	-2.08777977647962	0.00891481636319289	Down	0.00256565145147653	NA	NA	NA	NA	gi|460394192|ref|XP_004242688.1|//PREDICTED: CASP-like protein 2C1 [Solanum lycopersicum]
Solyc02g089320.3.1	2416	308.292074515932	1481.80911617371	2.2649899077423	7.39972947647066e-14	Up	2.80785917960606e-15	NA	NA	NA	K06889//uncharacterized protein	gi|460372624|ref|XP_004232128.1|//PREDICTED: alpha/beta hydrolase domain-containing protein 17B [Solanum lycopersicum];gi|747101839|ref|XP_011099063.1|//PREDICTED: alpha/beta hydrolase domain-containing protein 17C [Sesamum indicum]
Solyc05g039950.2.1	1647	6.75731575515473	90.7736829108439	3.74775191634727	3.29540174434251e-05	Up	5.2302894839013e-06	NA	NA	NA	K13065//shikimate O-hydroxycinnamoyltransferase [EC:2.3.1.133];K15400//omega-hydroxypalmitate O-feruloyl transferase [EC:2.3.1.188];K19861//benzyl alcohol O-benzoyltransferase [EC:2.3.1.196 2.3.1.232]	gi|460389055|ref|XP_004240174.1|//PREDICTED: deacetylvindoline O-acetyltransferase-like isoform X1 [Solanum lycopersicum]
Solyc01g087550.3.1	1561	408.017984340331	843.610827640337	1.04794486832933	0.00559110320812955	Up	0.00151635854116411	NA	GO:0046872//metal ion binding	NA	K00326//cytochrome-b5 reductase [EC:1.6.2.2]	gi|460367576|ref|XP_004229649.1|//PREDICTED: uncharacterized protein C1F12.10c [Solanum lycopersicum]
Solyc02g083280.3.1	942	2877.62509828844	524.982672898624	-2.4545369352529	2.13964862822055e-05	Down	3.26434390759904e-06	NA	GO:0004871//signal transducer activity	NA	K15692//E3 ubiquitin-protein ligase RNF13 [EC:2.3.2.27]	gi|460373452|ref|XP_004232533.1|//PREDICTED: thiosulfate sulfurtransferase 16, chloroplastic isoform X2 [Solanum lycopersicum];gi|723672885|ref|XP_010316446.1|//PREDICTED: thiosulfate sulfurtransferase 16, chloroplastic isoform X1 [Solanum lycopersicum]
Solyc10g044780.2.1	1566	467.969040476544	139.905765144186	-1.74195767494492	0.00262926556610721	Down	0.000649280019959007	NA	NA	NA	K10994//cell cycle checkpoint control protein RAD9A [EC:3.1.11.2]	gi|460406787|ref|XP_004248840.1|//PREDICTED: cell cycle checkpoint control protein RAD9B isoform X2 [Solanum lycopersicum];gi|723736993|ref|XP_010327521.1|//PREDICTED: cell cycle checkpoint control protein RAD9B isoform X1 [Solanum lycopersicum]
Solyc02g077080.3.1	1824	2043.85351902668	13180.1190748608	2.6889996957747	1.59217324670683e-10	Up	9.91695801120885e-12	NA	NA	NA	K16573//gamma-tubulin complex component 6	gi|460374322|ref|XP_004232960.1|//PREDICTED: protein trichome birefringence-like 38 [Solanum lycopersicum]
Solyc12g055750.2.1	2283	488.211253494386	1584.26950431327	1.69824032159742	2.59097105282646e-06	Up	3.29521143292228e-07	GO:0016021//integral component of membrane	GO:0015369//calcium:proton antiporter activity	GO:0070588//calcium ion transmembrane transport	K07300//Ca2+:H+ antiporter	gi|460414529|ref|XP_004252621.1|//PREDICTED: vacuolar cation/proton exchanger 3-like [Solanum lycopersicum]
Solyc03g005300.3.1	1047	390.302227078371	1152.12918741762	1.56163889422616	0.000445838220821572	Up	9.07696571539967e-05	GO:0044464//cell part	GO:0032561//guanyl ribonucleotide binding	GO:0035556//intracellular signal transduction	K07950//ADP-ribosylation factor-like protein 5B	gi|460376474|ref|XP_004234023.1|//PREDICTED: ADP-ribosylation factor-like protein 5 [Solanum lycopersicum]
Solyc02g077720.3.1	704	80.6915759593388	17.0884467809092	-2.23939679467464	0.000112301571375354	Down	1.98719419050365e-05	NA	NA	NA	NA	gi|460374233|ref|XP_004232916.1|//PREDICTED: uncharacterized protein LOC101260788 isoform X2 [Solanum lycopersicum]
Solyc02g076930.2.1	1593	18.6706485654353	186.865847847139	3.32315897329331	5.73585805797747e-13	Up	2.4651276058029e-14	NA	NA	NA	K08332//vacuolar protein 8	gi|460376126|ref|XP_004233851.1|//PREDICTED: U-box domain-containing protein 7 [Solanum lycopersicum]
Solyc08g007820.1.1	735	452.730867602472	13888.3414267182	4.93907683567759	1.62187058525015e-09	Up	1.1873243735766e-10	NA	NA	NA	K09286//EREBP-like factor	gi|723720083|ref|XP_010324621.1|//PREDICTED: dehydration-responsive element-binding protein 1E-like [Solanum lycopersicum]
Solyc03g111290.1.1	1485	46.8342317339219	3587.82816151324	6.25940358455995	2.19934824432481e-19	Up	4.37770971548176e-21	NA	NA	NA	K20665	gi|460381186|ref|XP_004236333.1|//PREDICTED: cytochrome P450 94B3-like [Solanum lycopersicum]
Solyc12g006850.2.1	4605	169.012946865628	1331.72710024913	2.97809280287063	7.1788980354745e-09	Up	5.80669775494992e-10	GO:0031224//intrinsic component of membrane	GO:0005267//potassium channel activity	GO:0030001//metal ion transport	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04908//potassium voltage-gated channel Eag-related subfamily H member 5	gi|936976184|ref|NP_001234258.2|//potassium channel [Solanum lycopersicum]
Solyc12g070113.1.1	1746	147.541596242151	36.6933314380657	-2.00753194935433	0.00231026134820523	Down	0.000560394591623721	NA	NA	NA	K01937//CTP synthase [EC:6.3.4.2]	gi|970043221|ref|XP_015083011.1|//PREDICTED: PCI domain-containing protein 2 [Solanum pennellii];gi|970010578|ref|XP_015066183.1|//PREDICTED: CTP synthase-like [Solanum pennellii]
Solyc07g052320.3.1	1847	698.078345582658	1588.7861253683	1.18646406437878	1.64621301178391e-05	Up	2.44675532094608e-06	NA	NA	NA	K20855	gi|460395809|ref|XP_004243473.1|//PREDICTED: probable beta-1,3-galactosyltransferase 2 isoform X1 [Solanum lycopersicum]
Solyc03g019660.3.1	983	2016.80930521606	103.842627113436	-4.2796039869253	3.14194606878921e-13	Down	1.301141375587e-14	NA	NA	NA	NA	gi|460377048|ref|XP_004234307.1|//PREDICTED: thylakoid lumenal 17.9 kDa protein, chloroplastic [Solanum lycopersicum]
Solyc06g053385.1.1	1024	350.747387361604	828.654455205816	1.24033827287307	2.22435197304967e-05	Up	3.40269140353207e-06	GO:0048500//signal recognition particle	NA	GO:0006886//intracellular protein transport	K03104//signal recognition particle subunit SRP14	gi|961658052|ref|NP_001304856.1|//signal recognition particle subunit SRP14 [Solanum lycopersicum]
Solyc10g086700.2.1	2652	118.977608608595	376.719408369601	1.66280027579642	9.13909113430246e-06	Up	1.29108227967073e-06	NA	NA	NA	K15407//queuine tRNA-ribosyltransferase subunit QTRTD1 [EC:2.4.2.29]	gi|460408481|ref|XP_004249673.1|//PREDICTED: uncharacterized protein LOC101251531 [Solanum lycopersicum]
Solyc02g083730.3.1	1261	0.749132993872237	7.65411944060882	3.35294264532861	0.023768979446805	Up	0.00786038413791763	NA	NA	NA	K15692//E3 ubiquitin-protein ligase RNF13 [EC:2.3.2.27]	gi|723672756|ref|XP_010316426.1|//PREDICTED: thiosulfate sulfurtransferase 18 isoform X1 [Solanum lycopersicum]
Solyc06g069880.1.1	1413	92.686558890856	13.9382955370844	-2.73330598886575	2.0676137625621e-05	Down	3.14673736116784e-06	NA	NA	NA	NA	gi|460391943|ref|XP_004241577.1|//PREDICTED: protein PHYTOCHROME KINASE SUBSTRATE 3-like [Solanum lycopersicum]
Solyc08g008170.3.1	3757	657.068036625592	1641.73936453403	1.32111044086193	0.000288060283998407	Up	5.60594432218459e-05	NA	GO:0046872//metal ion binding;GO:0004674//protein serine/threonine kinase activity;GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0005509//calcium ion binding	GO:0006464//cellular protein modification process;GO:0006468//protein phosphorylation	K13412//calcium-dependent protein kinase [EC:2.7.11.1]	gi|460398143|ref|XP_004244622.1|//PREDICTED: calcium-dependent protein kinase 3 [Solanum lycopersicum];gi|659102182|ref|XP_008451994.1|//PREDICTED: calcium-dependent protein kinase 3 [Cucumis melo]
Solyc00g247300.3.1	1752	5.80804270994886	196.329767221815	5.07908305604244	1.17738389789505e-06	Up	1.40392540978316e-07	NA	NA	NA	K20562	gi|460416356|ref|XP_004253509.1|//PREDICTED: cytochrome P450 CYP736A12-like [Solanum lycopersicum]
Solyc01g109500.3.1	1429	215.268746530659	27.3446588484913	-2.97680791091398	0.000100960817026583	Down	1.76308866769622e-05	NA	NA	NA	K06699//proteasome activator subunit 4;K12472//epidermal growth factor receptor substrate 15	gi|460370152|ref|XP_004230918.1|//PREDICTED: BURP domain-containing protein 5-like [Solanum lycopersicum]
Solyc06g060640.1.1	405	641.431300488916	18.6883370839075	-5.10108464920827	2.92409849839472e-14	Down	1.05307095803621e-15	NA	NA	NA	K02883//large subunit ribosomal protein L18e;K11855//ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12]	gi|460392808|ref|XP_004242005.1|//PREDICTED: 14 kDa proline-rich protein DC2.15-like [Solanum lycopersicum]
Solyc03g007900.3.1	1572	221.032819169923	1375.37821479444	2.63749589601121	1.32993629344778e-09	Up	9.57744490435783e-11	NA	GO:0003824//catalytic activity	NA	NA	gi|723679311|ref|XP_010317505.1|//PREDICTED: glutaminyl-peptide cyclotransferase isoform X2 [Solanum lycopersicum];gi|723679307|ref|XP_010317504.1|//PREDICTED: glutaminyl-peptide cyclotransferase isoform X1 [Solanum lycopersicum]
Solyc03g078360.1.1	2379	152.362774350005	486.486234651791	1.67488852081257	0.0279297212423693	Up	0.00947994787658472	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460378631|ref|XP_004235072.1|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Solanum lycopersicum]
Solyc12g096100.1.1	582	1196.61137428863	104.818781019327	-3.51298553998163	8.10979269615213e-12	Down	4.10809910320216e-13	NA	NA	NA	NA	gi|460415476|ref|XP_004253084.1|//PREDICTED: protein PAM68, chloroplastic [Solanum lycopersicum]
Solyc03g044480.3.1	1135	82.1715261066607	7.87800054309776	-3.38273713952353	2.68966715984132e-06	Down	3.43276440856444e-07	NA	NA	NA	NA	gi|460377900|ref|XP_004234724.1|//PREDICTED: cyclin-dependent kinase inhibitor 1-like isoform X2 [Solanum lycopersicum]
Solyc07g005600.3.1	3496	2728.22919021024	6440.40165977452	1.23918581988427	0.000244094932710611	Up	4.67572632771669e-05	GO:0016021//integral component of membrane	NA	NA	K17086//transmembrane 9 superfamily member 2/4	gi|460393998|ref|XP_004242593.1|//PREDICTED: transmembrane 9 superfamily member 4 [Solanum lycopersicum];gi|661886316|emb|CDP10238.1|//unnamed protein product [Coffea canephora]
Solyc04g082920.3.1	1584	353.099791308078	38.7515112678178	-3.18775148825205	3.83895327294673e-06	Down	5.01977340148245e-07	NA	NA	NA	K14172//light-harvesting complex II chlorophyll a/b binding protein 7	gi|460385561|ref|XP_004238472.1|//PREDICTED: chlorophyll a-b binding protein of LHCII type 1 [Solanum lycopersicum]
Solyc02g089060.3.1	1761	260.867031280981	1016.05088585957	1.96158612588217	1.5173174394623e-06	Up	1.84659364836903e-07	NA	NA	NA	K08233//polyneuridine-aldehyde esterase [EC:3.1.1.78];K13544//pheophorbidase [EC:3.1.1.82]	gi|460372674|ref|XP_004232153.1|//PREDICTED: putative methylesterase 11, chloroplastic [Solanum lycopersicum]
Solyc08g067910.3.1	1932	1744.62936363272	5141.00004116478	1.55912844682903	1.6356680880532e-08	Up	1.38947650688581e-09	NA	NA	GO:0006810//transport	K08490//syntaxin 5	gi|460399410|ref|XP_004245234.1|//PREDICTED: syntaxin-32 [Solanum lycopersicum]
Solyc12g005250.2.1	4839	717.78072061321	166.655352356142	-2.10667552105072	0.0209578114298125	Down	0.00680261748661129	GO:0015630//microtubule cytoskeleton	GO:0032559//adenyl ribonucleotide binding;GO:0003774//motor activity	GO:0007017//microtubule-based process	K10405//kinesin family member C1	gi|460412178|ref|XP_004251479.1|//PREDICTED: kinesin-3-like [Solanum lycopersicum];gi|698496066|ref|XP_009794105.1|//PREDICTED: kinesin-3-like [Nicotiana sylvestris]
Solyc12g044610.2.1	1856	986.436724136238	488.361624130178	-1.01427667437446	0.0134166226711135	Down	0.00407379634258575	NA	GO:0005488//binding	NA	K08869//aarF domain-containing kinase;K17613//calcineurin-binding protein cabin-1	gi|460413995|ref|XP_004252360.1|//PREDICTED: transcription factor MYB1R1 [Solanum lycopersicum]
Solyc09g061860.3.1	2965	1641.46905642814	660.891152828443	-1.31250296568066	0.0130508139382904	Down	0.00394666965414307	NA	NA	NA	K05841//sterol 3beta-glucosyltransferase [EC:2.4.1.173]	gi|723730136|ref|XP_010326319.1|//PREDICTED: sterol 3-beta-glucosyltransferase UGT80A2-like isoform X2 [Solanum lycopersicum];gi|970052831|ref|XP_015088036.1|//PREDICTED: sterol 3-beta-glucosyltransferase UGT80A2-like isoform X2 [Solanum pennellii];gi|460403247|ref|XP_004247104.1|//PREDICTED: sterol 3-beta-glucosyltransferase UGT80A2-like isoform X1 [Solanum lycopersicum]
Solyc04g026030.3.1	1346	2302.22579258016	731.098349198241	-1.65489193451473	6.59731779711407e-06	Down	9.04954878983889e-07	NA	GO:0016765//transferase activity, transferring alkyl or aryl (other than methyl) groups;GO:0008757//S-adenosylmethionine-dependent methyltransferase activity	GO:0006730//one-carbon metabolic process;GO:0006596//polyamine biosynthetic process	K00797//spermidine synthase [EC:2.5.1.16]	gi|460383087|ref|XP_004237263.1|//PREDICTED: spermidine synthase 1 [Solanum lycopersicum]
Solyc09g074620.3.1	1532	623.568411573528	268.142288694722	-1.21754908197933	0.0138725541393696	Down	0.00422981559788442	NA	GO:0005515//protein binding	NA	K03686//molecular chaperone DnaJ;K04078//chaperonin GroES	gi|460403959|ref|XP_004247453.1|//PREDICTED: uncharacterized protein LOC101257008 [Solanum lycopersicum]
Solyc01g100760.2.1	753	471.01907483265	221.43063461742	-1.08893065499902	0.0238120348158112	Down	0.00787866894021287	NA	NA	NA	K07019//uncharacterized protein	gi|460368947|ref|XP_004230326.1|//PREDICTED: uncharacterized protein LOC101254945 [Solanum lycopersicum]
Solyc06g073760.3.1	1530	65.9765063006083	1410.92059031944	4.41854059807797	7.04151636573906e-27	Up	6.58797006038656e-29	NA	NA	NA	K05349//beta-glucosidase [EC:3.2.1.21]	gi|460391525|ref|XP_004241371.1|//PREDICTED: lysosomal beta glucosidase-like [Solanum lycopersicum]
Solyc06g008295.1.1	297	3.99002156250768	0.342660453770457	-3.54154493690782	0.0384318834663824	Down	0.0137050033220099	NA	NA	NA	NA	NA
Solyc02g055440.3.1	1932	3314.59223929208	672.267050206119	-2.3017250554272	3.11921978410196e-09	Down	2.3765041146207e-10	NA	NA	NA	K02184//formin 2	gi|971546812|ref|XP_015163266.1|//PREDICTED: uncharacterized protein LOC102605046 isoform X2 [Solanum tuberosum];gi|565356934|ref|XP_006345315.1|//PREDICTED: uncharacterized protein LOC102605612 isoform X2 [Solanum tuberosum];gi|460371813|ref|XP_004231729.1|//PREDICTED: uncharacterized protein LOC101246579 [Solanum lycopersicum]
Solyc06g069710.3.1	2141	79.9986764992897	321.509071560942	2.00681140727065	0.0387823275963989	Up	0.013864667659798	NA	NA	NA	K12581//CCR4-NOT transcription complex subunit 7/8;K13126//polyadenylate-binding protein;K05941//glutathione gamma-glutamylcysteinyltransferase [EC:2.3.2.15];K01054//acylglycerol lipase [EC:3.1.1.23]	gi|460391961|ref|XP_004241586.1|//PREDICTED: NAC domain-containing protein 100-like [Solanum lycopersicum]
Solyc06g048570.3.1	1261	96.6250522117193	17.9043951057619	-2.43208351011034	7.80120328457272e-07	Down	8.90386329855438e-08	NA	NA	NA	K13544//pheophorbidase [EC:3.1.1.82]	gi|460390443|ref|XP_004240843.1|//PREDICTED: methylesterase 17 [Solanum lycopersicum]
Solyc04g077510.3.1	2290	772.905585635707	209.919205393467	-1.88045802829663	0.0332026046286477	Down	0.0115852684482172	NA	NA	NA	K20496;K15601//lysine-specific demethylase 3 [EC:1.14.11.-]	gi|460384744|ref|XP_004238069.1|//PREDICTED: growth-regulating factor 1-like [Solanum lycopersicum]
Solyc06g062590.3.1	2988	951.093553144123	2598.89295042376	1.45023804767629	0.00399161964889114	Up	0.00103867216225246	GO:0031224//intrinsic component of membrane	NA	NA	K17086//transmembrane 9 superfamily member 2/4	gi|970035535|ref|XP_015079101.1|//PREDICTED: transmembrane 9 superfamily member 7-like [Solanum pennellii];gi|697104630|ref|XP_009606117.1|//PREDICTED: transmembrane 9 superfamily member 4-like [Nicotiana tomentosiformis]
Solyc11g008630.2.1	1602	1763.03886095994	212.916628980255	-3.049703739856	1.10610420914548e-14	Down	3.72714404751572e-16	NA	GO:0016747//transferase activity, transferring acyl groups other than amino-acyl groups	NA	K15400//omega-hydroxypalmitate O-feruloyl transferase [EC:2.3.1.188]	gi|460409295|ref|XP_004250074.1|//PREDICTED: omega-hydroxypalmitate O-feruloyl transferase [Solanum lycopersicum]
Solyc06g066540.1.1	579	30.3947393051964	91.9792918397012	1.59748744538368	0.0197008185209997	Up	0.00632499540717215	NA	NA	NA	K09286//EREBP-like factor	gi|460392282|ref|XP_004241746.1|//PREDICTED: dehydration-responsive element-binding protein 3-like [Solanum lycopersicum]
Solyc02g061770.3.1	869	218.211873241994	896.824313030106	2.03909578729147	0.0266350151585265	Up	0.00898397239858128	GO:0044421//extracellular region part	GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds	GO:0006950//response to stress;GO:0006026//aminoglycan catabolic process	K20547;K01183//chitinase [EC:3.2.1.14]	gi|525314362|ref|NP_001266258.1|//basic endochitinase precursor [Solanum lycopersicum]
Solyc11g066950.2.1	518	212.219202094008	17.1077032564941	-3.63283720737458	6.8546476760612e-12	Down	3.43907699865006e-13	NA	NA	NA	NA	gi|460411241|ref|XP_004251022.1|//PREDICTED: uncharacterized protein At5g22580 [Solanum lycopersicum]
Solyc03g063600.4.1	2613	1550.46674723342	15156.5597904987	3.28916784026126	3.34567129607654e-15	Up	1.05004295187731e-16	NA	NA	NA	K00942//guanylate kinase [EC:2.7.4.8]	gi|460378133|ref|XP_004234831.1|//PREDICTED: guanylate kinase 2 [Solanum lycopersicum]
Solyc05g009800.3.1	2608	696.672631497913	223.300318272963	-1.64149558126028	2.83518907948238e-08	Down	2.49224845091397e-09	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|460386554|ref|XP_004238963.1|//PREDICTED: probable leucine-rich repeat receptor-like protein kinase At2g28990 [Solanum lycopersicum]
Solyc09g031910.2.1	1877	75.8982085903729	158.742593962639	1.06455154588733	0.013005487249728	Up	0.00393150818530245	NA	NA	NA	NA	gi|460402946|ref|XP_004246968.1|//PREDICTED: uncharacterized protein LOC101268219 [Solanum lycopersicum]
Solyc10g080490.2.1	4674	796.896483345857	251.853932354503	-1.66180507378045	1.09452035451112e-05	Down	1.56459130742141e-06	NA	NA	NA	K06268//serine/threonine-protein phosphatase 2B regulatory subunit	gi|460407691|ref|XP_004249284.1|//PREDICTED: probable plastid-lipid-associated protein 13, chloroplastic [Solanum lycopersicum];gi|723738560|ref|XP_010312149.1|//PREDICTED: uncharacterized protein LOC104644370 [Solanum lycopersicum]
Solyc04g007210.3.1	2707	938.452404432025	115.666348610421	-3.02031438262478	3.08454202495185e-12	Down	1.47742526541789e-13	NA	NA	NA	K12135//zinc finger protein CONSTANS	gi|460382518|ref|XP_004236986.1|//PREDICTED: zinc finger protein CONSTANS-LIKE 16 [Solanum lycopersicum]
Solyc08g075100.3.1	3996	2803.79762911635	306.297751003165	-3.19437554402433	1.05567610944096e-14	Down	3.54541588864732e-16	NA	NA	NA	NA	gi|460401017|ref|XP_004246026.1|//PREDICTED: uncharacterized protein LOC101256996 [Solanum lycopersicum]
Solyc09g047840.3.1	991	283.735013249331	134.684239369615	-1.07496315415732	0.00333021331282345	Down	0.000845711320272333	NA	NA	NA	K17888//ubiquitin-like-conjugating enzyme ATG10, animal type	gi|460403001|ref|XP_004246994.1|//PREDICTED: ubiquitin-like-conjugating enzyme ATG10 [Solanum lycopersicum]
Solyc01g080810.3.1	3111	2486.75465707426	812.115443613222	-1.61450744975745	0.000264948833553069	Down	5.11765638687939e-05	GO:0009536//plastid	GO:0032559//adenyl ribonucleotide binding;GO:0046914//transition metal ion binding;GO:0004812//aminoacyl-tRNA ligase activity	GO:0003006//developmental process involved in reproduction;GO:0006412//translation	K01870//isoleucyl-tRNA synthetase [EC:6.1.1.5]	gi|565381221|ref|XP_006356976.1|//PREDICTED: isoleucine--tRNA ligase, chloroplastic/mitochondrial [Solanum tuberosum];gi|460367278|ref|XP_004229502.1|//PREDICTED: probable isoleucine--tRNA ligase, mitochondrial [Solanum lycopersicum]
Solyc07g005090.3.1	1217	144.103981757965	2875.64546884572	4.3187037159776	3.52447073566754e-13	Up	1.47006215640822e-14	NA	GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds	GO:0005975//carbohydrate metabolic process	K01183//chitinase [EC:3.2.1.14]	gi|460393931|ref|XP_004242561.1|//PREDICTED: acidic mammalian chitinase-like [Solanum lycopersicum]
Solyc05g025810.3.1	1306	1540.93976369341	207.369659177028	-2.89353373705607	6.71215788962309e-12	Down	3.36508586608881e-13	NA	GO:0016843//amine-lyase activity	GO:0008152//metabolic process	K01757//strictosidine synthase [EC:4.3.3.2]	gi|460387297|ref|XP_004239316.1|//PREDICTED: protein YLS2 isoform X2 [Solanum lycopersicum]
Solyc03g098010.3.1	1528	486.33888265034	7.43875546601228	-6.03075685622079	1.40925685403569e-11	Down	7.41714133702996e-13	NA	GO:0016791//phosphatase activity	NA	K14379//tartrate-resistant acid phosphatase type 5 [EC:3.1.3.2]	gi|460379234|ref|XP_004235369.1|//PREDICTED: purple acid phosphatase 17-like [Solanum lycopersicum]
Solyc01g103450.3.1	2639	33233.5993066913	13037.1441026141	-1.35001468049776	2.53955311207287e-09	Down	1.91498283350359e-10	NA	GO:0005515//protein binding;GO:0032559//adenyl ribonucleotide binding;GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	GO:0044267//cellular protein metabolic process;GO:0050896//response to stimulus	K03283//heat shock 70kDa protein 1/8	gi|460369188|ref|XP_004230445.1|//PREDICTED: stromal 70 kDa heat shock-related protein, chloroplastic [Solanum lycopersicum]
Solyc09g014280.1.1	1383	1432.57940468253	12803.2096484055	3.15981851443292	3.36558956058359e-13	Up	1.39752004267561e-14	NA	NA	NA	K19747//BAHD acyltransferase [EC:2.3.1.-]	gi|723727045|ref|XP_004246337.2|//PREDICTED: uncharacterized acetyltransferase At3g50280 [Solanum lycopersicum]
Solyc08g077980.3.1	1391	1808.06887303032	6156.35988109596	1.76762793547032	0.000516430636438673	Up	0.000106701021983732	GO:0016020//membrane;GO:0016021//integral component of membrane	NA	NA	NA	gi|350535435|ref|NP_001234450.1|//Bax inhibitor [Solanum lycopersicum];gi|183447473|gb|ACC62519.1|//Bax inhibitor [Capsicum annuum]
Solyc08g078310.3.1	1493	421.124634899391	2494.67635591049	2.56653348355708	8.73180893573057e-12	Up	4.45248047714306e-13	NA	NA	NA	NA	gi|460400534|ref|XP_004245789.1|//PREDICTED: uncharacterized protein LOC101263341 [Solanum lycopersicum]
Solyc02g093400.2.1	2841	102.568428614057	38.6140600582729	-1.40938856725731	0.0324329785254701	Down	0.0112804578284316	NA	NA	NA	NA	gi|970012529|ref|XP_015067206.1|//PREDICTED: putative lipid II flippase MurJ isoform X1 [Solanum pennellii];gi|723669159|ref|XP_010315959.1|//PREDICTED: uncharacterized protein LOC101265891 [Solanum lycopersicum]
Solyc01g091830.3.1	1599	73.2734114634357	450.571272381024	2.62039364150015	8.12460259717979e-08	Up	7.81328265272248e-09	NA	NA	NA	NA	gi|460367994|ref|XP_004229855.1|//PREDICTED: uncharacterized protein LOC101264556 [Solanum lycopersicum]
Solyc11g069380.2.1	2790	13610.2310202668	6217.93673859676	-1.13018371151686	0.00645238027569285	Down	0.0017852996416605	NA	GO:0052592//oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor;GO:0005506//iron ion binding;GO:0046914//transition metal ion binding;GO:0046429//4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase activity;GO:0003725//double-stranded RNA binding	GO:0006721//terpenoid metabolic process;GO:0016114//terpenoid biosynthetic process;GO:0055114//oxidation-reduction process	K03526//(E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3]	gi|697166607|ref|XP_009592136.1|//PREDICTED: 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, chloroplastic [Nicotiana tomentosiformis];gi|350539411|ref|NP_001234648.1|//GcpE [Solanum lycopersicum]
Solyc02g086130.3.1	3525	1109.65703363361	475.777747891636	-1.22175414198754	0.038166826310734	Down	0.0135948334659823	NA	NA	NA	NA	gi|460373075|ref|XP_004232348.1|//PREDICTED: uncharacterized protein LOC101265984 [Solanum lycopersicum]
Solyc07g053525.1.1	1446	1336.90877110104	6437.34808790984	2.26756546089677	7.2091509345617e-10	Up	5.01213873426634e-11	NA	NA	NA	NA	gi|914614385|ref|NP_001299574.1|//uncharacterized LOC543591 [Solanum lycopersicum]
Solyc10g084023.1.1	375	3.1316242450763	27.1982414374757	3.11853035070684	0.000911464244990384	Up	0.000200890416006715	NA	NA	NA	K14488//SAUR family protein	gi|970056911|ref|XP_015055099.1|//PREDICTED: auxin-responsive protein SAUR32-like [Solanum pennellii]
Solyc07g052450.2.1	798	1.08416517653082	22.8425829895674	4.39706931832318	7.36227289274581e-05	Up	1.2472614543585e-05	GO:0016020//membrane	NA	NA	K15283//solute carrier family 35, member E1	gi|565403673|ref|XP_006367280.1|//PREDICTED: glucose-6-phosphate/phosphate translocator 2, chloroplastic-like [Solanum tuberosum]
Solyc01g090560.3.1	825	251.900694556519	87.3665950075594	-1.52770143033736	0.00042517161284304	Down	8.61658736777848e-05	NA	NA	NA	K09286//EREBP-like factor	gi|460367812|ref|XP_004229764.1|//PREDICTED: ethylene-responsive transcription factor ERF038-like [Solanum lycopersicum]
Solyc01g005800.3.1	2465	13.4445875338433	299.792270519749	4.47886578646823	1.47614902908433e-14	Up	5.0895998654503e-16	NA	NA	NA	K06892//feruloyl-CoA ortho-hydroxylase [EC:1.14.11.-]	gi|460365451|ref|XP_004228615.1|//PREDICTED: uncharacterized protein LOC101245483 [Solanum lycopersicum]
Solyc02g077190.2.1	5056	325.088238191761	23.7171084385012	-3.77683132568831	1.19411724490636e-13	Down	4.65130654885624e-15	NA	NA	NA	K00145//N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]	gi|723674995|ref|XP_010316795.1|//PREDICTED: uncharacterized protein At4g18490 isoform X1 [Solanum lycopersicum]
Solyc02g091370.2.1	1686	72.9105454550299	21.9995458825649	-1.72865375083665	0.00553822777290897	Down	0.00149974745676844	NA	GO:0016758//transferase activity, transferring hexosyl groups	GO:0008152//metabolic process	K04628//2-hydroxyacylsphingosine 1-beta-galactosyltransferase [EC:2.4.1.45];K13493//cytokinin-N-glucosyltransferase [EC:2.4.1.-];K13030//cyanohydrin beta-glucosyltransferase [EC:2.4.1.85];K00699//glucuronosyltransferase [EC:2.4.1.17]	gi|723669926|ref|XP_010316060.1|//PREDICTED: 7-deoxyloganetic acid glucosyltransferase-like isoform X2 [Solanum lycopersicum];gi|460372355|ref|XP_004231996.1|//PREDICTED: 7-deoxyloganetic acid glucosyltransferase-like isoform X1 [Solanum lycopersicum]
Solyc02g079600.3.1	2425	250.00497768119	1555.53593549078	2.6373829991161	1.22775884118901e-11	Up	6.4115481456158e-13	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|723674124|ref|XP_010316638.1|//PREDICTED: probable receptor-like protein kinase At1g67000 isoform X1 [Solanum lycopersicum];gi|723674128|ref|XP_010316639.1|//PREDICTED: glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2 isoform X2 [Solanum lycopersicum]
Solyc01g006290.3.1	1037	81.0220062339311	26.1027772705363	-1.63411049477043	0.0394557278269657	Down	0.0141451166780884	NA	GO:0016209//antioxidant activity;GO:0005506//iron ion binding;GO:0003824//catalytic activity	GO:0042743//hydrogen peroxide metabolic process;GO:0006950//response to stress	K00430//peroxidase [EC:1.11.1.7]	gi|460365564|ref|XP_004228671.1|//PREDICTED: lignin-forming anionic peroxidase-like [Solanum lycopersicum]
Solyc12g009530.1.1	1467	43.1552017760033	1425.78442485224	5.04607758878974	1.0132965561524e-39	Up	3.21045949280432e-42	NA	NA	NA	K10406//kinesin family member C2/C3	gi|970064679|ref|XP_015059311.1|//PREDICTED: receptor-like protein 12 [Solanum pennellii]
Solyc07g064620.2.1	588	502.784803209526	2300.78692821465	2.19411443459759	1.98818777570796e-05	Up	3.00881257245203e-06	NA	GO:0008135//translation factor activity, RNA binding	GO:0006412//translation	K03113//translation initiation factor 1	gi|460397120|ref|XP_004244116.1|//PREDICTED: protein translation factor SUI1 homolog [Solanum lycopersicum]
Solyc05g056420.3.1	7576	77.2433661718129	582.749190412207	2.91539215341904	6.8668557633469e-11	Up	4.05438330443622e-12	NA	GO:0016301//kinase activity;GO:0005488//binding	GO:0007186//G-protein coupled receptor signaling pathway;GO:0048827//phyllome development;GO:0006950//response to stress	K00901//diacylglycerol kinase (ATP) [EC:2.7.1.107]	gi|723700923|ref|XP_010321303.1|//PREDICTED: diacylglycerol kinase 2 isoform X1 [Solanum lycopersicum];gi|460387959|ref|XP_004239639.1|//PREDICTED: diacylglycerol kinase 2 isoform X2 [Solanum lycopersicum]
Solyc12g098660.2.1	1657	2324.116751178	109.631352031663	-4.40595020399664	5.05306436646657e-35	Down	2.46698974103281e-37	NA	NA	NA	K12462//Rho GDP-dissociation inhibitor	gi|723753127|ref|XP_010314742.1|//PREDICTED: pheophytinase, chloroplastic isoform X2 [Solanum lycopersicum];gi|460415253|ref|XP_004252974.1|//PREDICTED: pheophytinase, chloroplastic isoform X1 [Solanum lycopersicum];gi|971554800|ref|XP_015165264.1|//PREDICTED: pheophytinase, chloroplastic isoform X2 [Solanum tuberosum]
Solyc08g069010.3.1	4993	1442.94837157537	225.336058853842	-2.67886958047325	1.1343076873798e-09	Down	8.10944589382162e-11	NA	NA	NA	K17046//protein DEK;K17964//leucine-rich PPR motif-containing protein, mitochondrial;K17710//pentatricopeptide repeat domain-containing protein 1	gi|697171292|ref|XP_009594574.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g10690 [Nicotiana tomentosiformis];gi|460399548|ref|XP_004245300.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g10690 isoform X2 [Solanum lycopersicum];gi|460399809|ref|XP_004245429.1|//PREDICTED: RNA polymerase II degradation factor 1-like [Solanum lycopersicum]
Solyc01g107590.3.1	1632	1241.19697657382	191.705741851265	-2.69476663425785	1.49318145255097e-07	Down	1.49997167683945e-08	NA	GO:0016616//oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;GO:0046914//transition metal ion binding	GO:0009699//phenylpropanoid biosynthetic process	K00083//cinnamyl-alcohol dehydrogenase [EC:1.1.1.195]	gi|460369778|ref|XP_004230734.1|//PREDICTED: probable cinnamyl alcohol dehydrogenase 1 [Solanum lycopersicum]
Solyc01g007050.2.1	1412	15.0813378418298	68.9929353916446	2.19368422959226	0.00646198309224888	Up	0.00178819749801907	NA	NA	NA	K10260//F-box and WD-40 domain protein 7;K08332//vacuolar protein 8	gi|723655607|ref|XP_004228911.2|//PREDICTED: E3 ubiquitin-protein ligase PUB24-like [Solanum lycopersicum]
Solyc06g075780.2.1	849	291.771483547809	2461.90639650475	3.07686511789997	1.14371496901879e-05	Up	1.64088225576015e-06	NA	NA	NA	K20221//importin-4	gi|460391272|ref|XP_004241247.1|//PREDICTED: zinc finger protein ZAT12-like [Solanum lycopersicum]
Solyc12g098190.2.1	1224	162.563274877074	1083.75033266265	2.73695916021591	9.69922980997321e-07	Up	1.13304704877203e-07	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K16219//protein N-terminal methyltransferase [EC:2.1.1.244];K08235//xyloglucan:xyloglucosyl transferase [EC:2.4.1.207]	gi|460415314|ref|XP_004253004.1|//PREDICTED: putative F-box protein PP2-B12 [Solanum lycopersicum]
Solyc08g082530.3.1	3358	3143.51384614111	1103.73374451949	-1.50998592730298	1.47260721216693e-09	Down	1.07036829570803e-10	GO:0016021//integral component of membrane;GO:0009941//chloroplast envelope	GO:0016787//hydrolase activity;GO:0005524//ATP binding;GO:0004222//metalloendopeptidase activity;GO:0000166//nucleotide binding	GO:0006508//proteolysis;GO:0010020//chloroplast fission	K03798//cell division protease FtsH [EC:3.4.24.-]	gi|697168015|ref|XP_009592878.1|//PREDICTED: ATP-dependent zinc metalloprotease FTSH 8, chloroplastic [Nicotiana tomentosiformis];gi|460399964|ref|XP_004245506.1|//PREDICTED: ATP-dependent zinc metalloprotease FtsH [Solanum lycopersicum]
Solyc02g071990.3.1	3464	910.817151861607	2728.05697864323	1.58264041238964	0.00180801214278807	Up	0.000427404689487176	NA	GO:0003700//transcription factor activity, sequence-specific DNA binding	GO:0006355//regulation of transcription, DNA-templated;GO:0009742//brassinosteroid mediated signaling pathway	K14503//brassinosteroid resistant 1/2	gi|460374509|ref|XP_004233053.1|//PREDICTED: BES1/BZR1 homolog protein 4 isoform X3 [Solanum lycopersicum];gi|723675316|ref|XP_010316856.1|//PREDICTED: BES1/BZR1 homolog protein 4 isoform X1 [Solanum lycopersicum]
Solyc04g071140.3.1	3811	1170.57399922099	2503.26852192931	1.0965969160928	0.000216068505290405	Up	4.09457388137923e-05	GO:0005829//cytosol;GO:0005886//plasma membrane	GO:0016831//carboxy-lyase activity;GO:0048037//cofactor binding;GO:0016830//carbon-carbon lyase activity;GO:0030170//pyridoxal phosphate binding	GO:0019752//carboxylic acid metabolic process;GO:0003006//developmental process involved in reproduction;GO:0006580//ethanolamine metabolic process	K01590//histidine decarboxylase [EC:4.1.1.22]	gi|460384145|ref|XP_004237774.1|//PREDICTED: serine decarboxylase [Solanum lycopersicum]
BGI_novel_G000162	2532	11.1264365429057	275.591399700148	4.63046734628439	5.55190134582041e-17	Up	1.419637812447e-18	NA	NA	NA	NA	gi|460400215|ref|XP_004245631.1|//PREDICTED: uncharacterized protein LOC101265850 [Solanum lycopersicum]
Solyc01g007100.3.1	2885	3911.80517514821	1284.57946968099	-1.6065383752151	1.45180378831111e-12	Down	6.62370596724615e-14	GO:0009527//plastid outer membrane;GO:0030659//cytoplasmic vesicle membrane	GO:0035250//UDP-galactosyltransferase activity	GO:0008152//metabolic process;GO:0044403//symbiosis, encompassing mutualism through parasitism	K09480//digalactosyldiacylglycerol synthase [EC:2.4.1.241]	gi|460365425|ref|XP_004228603.1|//PREDICTED: digalactosyldiacylglycerol synthase 1, chloroplastic-like [Solanum lycopersicum]
Solyc11g009020.2.1	1748	4117.14450664063	741.455308229967	-2.47321244544876	3.20410005236734e-32	Down	1.92284221123878e-34	NA	GO:0003824//catalytic activity	NA	K20884;K17623//pseudouridine 5'-phosphatase [EC:3.1.3.96]	gi|460409351|ref|XP_004250102.1|//PREDICTED: haloacid dehalogenase-like hydrolase domain-containing protein At4g39970 [Solanum lycopersicum]
Solyc10g011980.3.1	2489	549.825305445677	1892.41662803652	1.7831845296621	1.35387553798908e-08	Up	1.13899548577656e-09	NA	NA	NA	NA	gi|460405192|ref|XP_004248060.1|//PREDICTED: uncharacterized protein At1g01500 isoform X2 [Solanum lycopersicum];gi|970054406|ref|XP_015088841.1|//PREDICTED: uncharacterized protein At1g01500-like isoform X2 [Solanum pennellii]
Solyc05g005940.3.1	3130	14.4596965892937	2.99522802069561	-2.27129953846359	0.0333102131314293	Down	0.0116302656329991	NA	NA	NA	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460386020|ref|XP_004238698.1|//PREDICTED: protein NRT1/ PTR FAMILY 1.2-like [Solanum lycopersicum]
Solyc03g006970.1.1	2328	1191.94844447349	272.244550428358	-2.13034676040342	0.00705691929526274	Down	0.00197440123118541	NA	GO:0004175//endopeptidase activity;GO:0005515//protein binding	GO:0044092//negative regulation of molecular function;GO:0019538//protein metabolic process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K11262//acetyl-CoA carboxylase / biotin carboxylase 1 [EC:6.4.1.2 6.3.4.14];K13199//plasminogen activator inhibitor 1 RNA-binding protein;K01183//chitinase [EC:3.2.1.14]	gi|350537305|ref|NP_001234288.1|//SBT2 protein precursor [Solanum lycopersicum]
Solyc06g083310.3.1	2713	1713.78503662915	7703.12121006433	2.16825696580209	2.1720188457018e-09	Up	1.62164669298521e-10	NA	GO:0016740//transferase activity	NA	K13648//alpha-1,4-galacturonosyltransferase [EC:2.4.1.43]	gi|460393630|ref|XP_004242412.1|//PREDICTED: galacturonosyltransferase 8-like [Solanum lycopersicum]
Solyc11g071970.2.1	3115	199.660520504643	48.443675260465	-2.04316886563694	8.53885774393453e-07	Down	9.86036278914164e-08	NA	NA	NA	K08857//NIMA (never in mitosis gene a)-related kinase [EC:2.7.11.1]	gi|460412093|ref|XP_004251437.1|//PREDICTED: serine/threonine-protein kinase Nek5-like [Solanum lycopersicum]
Solyc06g035530.3.1	2426	476.527892079336	0.597553149811696	-9.63927790455006	7.73340413566562e-19	Down	1.61424866407214e-20	NA	GO:0046914//transition metal ion binding;GO:0003824//catalytic activity	GO:0008152//metabolic process	K05282//gibberellin 20-oxidase [EC:1.14.11.12]	gi|806776497|ref|NP_001234628.2|//gibberellin 20-oxidase-2 [Solanum lycopersicum]
Solyc12g010870.2.1	1264	1768.81853141699	225.155491420766	-2.97379247528442	1.8215410978616e-11	Down	9.75680094538212e-13	NA	NA	NA	K02116//ATP synthase protein I	gi|460412833|ref|XP_004251802.1|//PREDICTED: uncharacterized protein LOC101257837 [Solanum lycopersicum]
Solyc11g010330.2.1	1740	571.182706863583	2678.45955296078	2.22937930420449	2.03458177071195e-05	Up	3.09069204344406e-06	NA	NA	NA	K19041//E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27];K10664//E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:2.3.2.27]	gi|460409391|ref|XP_004250122.1|//PREDICTED: RING-H2 finger protein ATL52-like [Solanum lycopersicum]
Solyc01g097230.3.1	460	24.6918003222182	119.354730559546	2.27315181314328	2.86233805978197e-05	Up	4.46933581796134e-06	NA	NA	NA	K20359//PRA1 family protein 1	gi|460368468|ref|XP_004230088.1|//PREDICTED: PRA1 family protein F3 [Solanum lycopersicum]
Solyc09g011310.3.1	1416	574.233969252876	1684.11757358868	1.55228227911748	0.00235281123500077	Up	0.000572767637385941	GO:0016021//integral component of membrane	NA	NA	K20393//PRA1 family protein 3	gi|460401865|ref|XP_004246436.1|//PREDICTED: PRA1 family protein A1 [Solanum lycopersicum]
Solyc12g010480.2.1	3270	61.3379968324151	21.7793935494833	-1.49381726949273	0.00649231565245929	Down	0.00179755929128029	NA	NA	NA	K07297//adiponectin receptor	gi|723748201|ref|XP_010313846.1|//PREDICTED: heptahelical transmembrane protein 2-like [Solanum lycopersicum]
Solyc01g103470.2.1	1040	74.3678799266178	590.163609090798	2.98836341384892	1.8422742520644e-10	Up	1.16120685859583e-11	NA	NA	NA	NA	gi|590681929|ref|XP_007041211.1|//Uncharacterized protein TCM_006157 [Theobroma cacao]
Solyc05g005190.3.1	856	2772.31815883497	10783.1494323982	1.95961386757377	4.66809723977255e-13	Up	1.96969064985184e-14	GO:0043231//intracellular membrane-bounded organelle	GO:0032561//guanyl ribonucleotide binding	GO:0006464//cellular protein modification process;GO:0035556//intracellular signal transduction;GO:0015031//protein transport	K07937//ADP-ribosylation factor 1	gi|697151091|ref|XP_009629758.1|//PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis]
Solyc06g005710.3.1	2265	6182.09730861246	1102.55166214214	-2.48725010538538	1.0028042140899e-15	Down	2.96289828641169e-17	NA	NA	NA	NA	gi|460389468|ref|XP_004240374.1|//PREDICTED: protein TIC 62, chloroplastic [Solanum lycopersicum]
Solyc03g119580.1.1	1158	0.666083697400392	51.8470706943488	6.28241519839647	5.74903621230755e-06	Up	7.79167126433214e-07	NA	NA	NA	K09286//EREBP-like factor	gi|460381359|ref|XP_004236418.1|//PREDICTED: uncharacterized protein LOC101265720 [Solanum lycopersicum]
Solyc12g007050.1.1	198	94.5573804129176	1650.68664055928	4.12573239271971	3.51105978420392e-07	Up	3.77699363993309e-08	NA	NA	NA	NA	NA
Solyc04g054490.3.1	1402	685.223723709118	246.65295501016	-1.47409252949694	0.000277476526431818	Down	5.38549378682898e-05	NA	GO:0004175//endopeptidase activity	GO:0019538//protein metabolic process	K00924;K02882//large subunit ribosomal protein L18Ae;K06002//pepsin A [EC:3.4.23.1]	gi|460383422|ref|XP_004237424.1|//PREDICTED: aspartic proteinase-like protein 1 isoform X1 [Solanum lycopersicum];gi|723692162|ref|XP_010319758.1|//PREDICTED: aspartic proteinase-like protein 1 isoform X2 [Solanum lycopersicum]
Solyc01g104410.3.1	1918	267.106677710835	87.0449279289674	-1.61758390382698	0.000107762986163665	Down	1.89566476115001e-05	NA	NA	NA	K05841//sterol 3beta-glucosyltransferase [EC:2.4.1.173]	gi|460369330|ref|XP_004230516.1|//PREDICTED: sterol 3-beta-glucosyltransferase UGT80B1 [Solanum lycopersicum]
Solyc08g006070.3.1	836	290.078793341598	140.08180728428	-1.05017522681256	0.0311293378170954	Down	0.0107597416720563	NA	NA	NA	NA	gi|460397821|ref|XP_004244465.1|//PREDICTED: AIG2-like protein [Solanum lycopersicum]
Solyc03g119060.3.1	2524	1709.58334085234	740.724259604856	-1.20663626166662	0.00240046304864734	Down	0.000585889072705485	NA	GO:0016209//antioxidant activity;GO:0016705//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen;GO:0016701//oxidoreductase activity, acting on single donors with incorporation of molecular oxygen;GO:0005506//iron ion binding	GO:0008152//metabolic process;GO:0006950//response to stress	K10529//alpha-dioxygenase [EC:1.-.-.-]	gi|927261905|ref|NP_001234061.2|//alpha-dioxygenase 2 [Solanum lycopersicum]
Solyc02g067540.3.1	1737	1590.73945062677	455.714088810633	-1.80349667546332	4.24963961674545e-09	Down	3.32171398401491e-10	NA	GO:0016741//transferase activity, transferring one-carbon groups	GO:0000154//rRNA modification	NA	gi|460375094|ref|XP_004233343.1|//PREDICTED: uncharacterized protein LOC101262377 [Solanum lycopersicum]
Solyc09g009380.3.1	3594	187.758476155997	30.639135498099	-2.61543054170839	0.000691112758801676	Down	0.000147429488542642	NA	NA	NA	K08286//protein-serine/threonine kinase [EC:2.7.11.-]	gi|460402789|ref|XP_004246893.1|//PREDICTED: serine/threonine-protein kinase KIPK-like [Solanum lycopersicum]
Solyc03g083785.1.1	1874	2.127900051264	25.9771334553608	3.60973994665477	0.00408265665364313	Up	0.00106525259339131	NA	NA	NA	K12471//epsin;K12448//UDP-arabinose 4-epimerase [EC:5.1.3.5];K04460//serine/threonine-protein phosphatase 5 [EC:3.1.3.16]	gi|723742619|ref|XP_004250585.2|//PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Solanum lycopersicum]
Solyc09g092290.1.1	2547	13.5403067445575	52.1997806053805	1.94678332083244	0.00556039070483529	Up	0.00150699272457348	NA	GO:0032559//adenyl ribonucleotide binding;GO:0016462//pyrophosphatase activity	GO:0012501//programmed cell death;GO:0006950//response to stress	K13457//disease resistance protein RPM1	gi|460404822|ref|XP_004247879.1|//PREDICTED: disease resistance protein RPP13-like [Solanum lycopersicum]
Solyc07g005750.3.1	1237	87.0253548796142	217.103478897802	1.31887514687219	0.00309213521219141	Up	0.000779488237664027	NA	NA	NA	K10268//F-box and leucine-rich repeat protein 2/20	gi|970038085|ref|XP_015080379.1|//PREDICTED: F-box protein SKIP1-like [Solanum pennellii]
Solyc01g009235.1.1	4823	1423.40713492255	511.560385426926	-1.47637191947892	0.000831071874518909	Down	0.000181127078064413	NA	GO:0016623//oxidoreductase activity, acting on the aldehyde or oxo group of donors, oxygen as acceptor;GO:0046914//transition metal ion binding;GO:0051536//iron-sulfur cluster binding;GO:0050662//coenzyme binding	GO:0009850//auxin metabolic process	K09842//abscisic-aldehyde oxidase [EC:1.2.3.14]	gi|460365152|ref|XP_004228468.1|//PREDICTED: abscisic-aldehyde oxidase-like [Solanum lycopersicum];gi|557884453|gb|AHA43417.1|//ABA aldehyde oxidase [Solanum nigrum]
Solyc10g083795.1.1	2127	1587.06998660671	406.154294014589	-1.9662659472533	4.78466930296384e-07	Down	5.24872586798218e-08	NA	GO:0016705//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen;GO:0020037//heme binding;GO:0005506//iron ion binding;GO:0004497//monooxygenase activity;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process;GO:0055114//oxidation-reduction process	K09837//carotene epsilon-monooxygenase [EC:1.14.99.45]	gi|948284442|ref|NP_001234058.2|//cytochrome P450-type monooxygenase 97C11 [Solanum lycopersicum];gi|802687904|ref|XP_012082505.1|//PREDICTED: carotene epsilon-monooxygenase, chloroplastic [Jatropha curcas]
Solyc02g085290.3.1	2613	1758.90459292049	285.576198747206	-2.62272958124052	1.7044917877928e-10	Down	1.07118426801054e-11	GO:0044424//intracellular part	NA	NA	K06287//septum formation protein	gi|723672239|ref|XP_010316365.1|//PREDICTED: maf-like protein DDB_G0281937 isoform X2 [Solanum lycopersicum];gi|698564196|ref|XP_009772915.1|//PREDICTED: maf-like protein DDB_G0281937 isoform X2 [Nicotiana sylvestris];gi|460373194|ref|XP_004232406.1|//PREDICTED: maf-like protein DDB_G0281937 isoform X1 [Solanum lycopersicum];gi|698564192|ref|XP_009772914.1|//PREDICTED: maf-like protein DDB_G0281937 isoform X1 [Nicotiana sylvestris];gi|698564207|ref|XP_009772918.1|//PREDICTED: maf-like protein DDB_G0281937 isoform X5 [Nicotiana sylvestris]
Solyc01g057680.3.1	1031	1.16327625013992	107.822605997212	6.53432213092874	2.00820196482541e-12	Up	9.35683784117995e-14	NA	NA	NA	K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|723751177|ref|XP_004252390.2|//PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Solanum lycopersicum];gi|971575440|ref|XP_015170720.1|//PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Solanum tuberosum]
Solyc02g089240.3.1	1476	490.049114873321	1473.00733088968	1.58776635560612	5.54369158028499e-08	Up	5.15975766958834e-09	NA	NA	NA	K19043//E3 ubiquitin-protein ligase RHF [EC:2.3.2.27];K00469//inositol oxygenase [EC:1.13.99.1]	gi|460372636|ref|XP_004232134.1|//PREDICTED: E3 ubiquitin-protein ligase At3g02290 [Solanum lycopersicum]
Solyc08g082590.3.1	1507	2780.82448865391	32.2241702709542	-6.43122567023013	3.29321308696519e-32	Down	1.98859594486492e-34	NA	NA	NA	K17479//glutaredoxin domain-containing cysteine-rich protein 1	gi|460399956|ref|XP_004245502.1|//PREDICTED: glutaredoxin domain-containing cysteine-rich protein 1 [Solanum lycopersicum]
Solyc03g093210.3.1	2112	119.366587247306	54.9152455480595	-1.12012042769685	0.029484445223419	Down	0.0100856848745831	NA	NA	NA	NA	gi|723682986|ref|XP_010318159.1|//PREDICTED: uncharacterized protein LOC101260705 isoform X2 [Solanum lycopersicum];gi|723682983|ref|XP_010318158.1|//PREDICTED: uncharacterized protein LOC101260705 isoform X1 [Solanum lycopersicum];gi|723682992|ref|XP_010318161.1|//PREDICTED: uncharacterized protein LOC101260705 isoform X4 [Solanum lycopersicum]
Solyc04g009860.3.1	2029	949.504661957052	4021.18032010519	2.08237204278938	0.00463212820204309	Up	0.00122709613582527	NA	NA	NA	K18054//2'-deoxymugineic-acid 2'-dioxygenase / mugineic-acid 3-dioxygenase [EC:1.14.11.24 1.14.11.25];K06892//feruloyl-CoA ortho-hydroxylase [EC:1.14.11.-];K13229//2,4-dihydroxy-1,4-benzoxazin-3-one-glucoside dioxygenase [EC:1.14.20.2]	gi|460382133|ref|XP_004236794.1|//PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1 [Solanum lycopersicum];gi|460382135|ref|XP_004236795.1|//PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog 1-like [Solanum lycopersicum]
Solyc01g107857.1.1	501	1.48049108227009	15.0982107373973	3.35022988282042	0.00712276483201106	Up	0.00199786809903396	NA	NA	NA	K13496//UDP-glucosyl transferase 73C [EC:2.4.1.-];K14595//abscisate beta-glucosyltransferase [EC:2.4.1.263]	gi|226316457|gb|ACO44747.1|//UDP glycosyltransferase [Withania somnifera]
Solyc02g079230.3.1	2422	588.815940612012	4239.58657525691	2.84803495261011	1.19736102178297e-11	Up	6.24387978781266e-13	NA	NA	NA	NA	gi|460373985|ref|XP_004232792.1|//PREDICTED: vesicle-associated protein 4-2 [Solanum lycopersicum]
Solyc03g083470.3.1	2012	137.038605361193	1332.23920922891	3.28119886826544	6.04262067901138e-05	Up	1.00928072396936e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460378695|ref|XP_004235104.1|//PREDICTED: probable receptor-like protein kinase At5g39030 [Solanum lycopersicum]
Solyc05g005710.3.1	1845	14183.6183024934	4249.68862445637	-1.73879657360785	0.000734121258991082	Down	0.000157808296679925	NA	GO:0016765//transferase activity, transferring alkyl or aryl (other than methyl) groups;GO:0008757//S-adenosylmethionine-dependent methyltransferase activity	GO:0006730//one-carbon metabolic process;GO:0006596//polyamine biosynthetic process	K00797//spermidine synthase [EC:2.5.1.16]	gi|350536257|ref|NP_001234493.1|//spermidine synthase [Solanum lycopersicum]
Solyc04g054480.3.1	7596	4639.59919018615	2078.34447295339	-1.15856538592868	0.04870067838253	Down	0.0181293303640349	NA	NA	NA	K02105//catenin beta 1;K08332//vacuolar protein 8	gi|723692170|ref|XP_010319760.1|//PREDICTED: uncharacterized protein LOC101244277 isoform X2 [Solanum lycopersicum];gi|661894409|emb|CDP01408.1|//unnamed protein product [Coffea canephora]
Solyc03g044210.3.1	2644	2.17863009221242	108.342063407885	5.63602839927014	3.88183368022683e-09	Up	3.01685672553785e-10	NA	NA	NA	NA	gi|460377885|ref|XP_004234717.1|//PREDICTED: vicilin-like antimicrobial peptides 2-2 [Solanum lycopersicum]
Solyc01g095710.3.1	5259	858.552825343618	358.50805441331	-1.25990137204434	6.52434778930109e-07	Down	7.34195839268674e-08	GO:0005634//nucleus;GO:0005737//cytoplasm	GO:0044822//poly(A) RNA binding;GO:0005524//ATP binding;GO:0004004//ATP-dependent RNA helicase activity	GO:0006396//RNA processing	K14780//ATP-dependent RNA helicase DHX37/DHR1 [EC:3.6.4.13]	gi|460370747|ref|XP_004231211.1|//PREDICTED: probable ATP-dependent RNA helicase DHX37 [Solanum lycopersicum]
Solyc05g044480.3.1	3047	501.294992435173	137.428985910877	-1.86697349966418	1.19279295684214e-06	Down	1.42318855481276e-07	NA	NA	NA	K15083//DNA repair protein RAD16	gi|460389001|ref|XP_004240150.1|//PREDICTED: DNA repair protein RAD16-like [Solanum lycopersicum]
Solyc08g082130.3.1	4681	144.418288551137	430.303279225001	1.57510038382635	0.0109901819881521	Up	0.0032497805916211	NA	NA	NA	K07020//uncharacterized protein	gi|460400003|ref|XP_004245525.1|//PREDICTED: uncharacterized protein LOC101259961 [Solanum lycopersicum];gi|460400009|ref|XP_004245528.1|//PREDICTED: hornerin-like [Solanum lycopersicum]
BGI_novel_G000206	1536	119.21287782525	245.436041036452	1.0418070274141	0.0322117533968948	Up	0.0111891057814844	NA	NA	NA	NA	gi|697183937|ref|XP_009600990.1|//PREDICTED: uncharacterized protein LOC104096334, partial [Nicotiana tomentosiformis]
Solyc02g072120.3.1	1147	43.5212389994314	91.5186955301356	1.07234685964561	0.0290038039770885	Up	0.00990181305450102	GO:0031224//intrinsic component of membrane;GO:0043231//intracellular membrane-bounded organelle	GO:0005048//signal sequence binding;GO:0004871//signal transducer activity	GO:0006810//transport;GO:0035437//maintenance of protein localization in endoplasmic reticulum	K10949//ER lumen protein retaining receptor	gi|460374531|ref|XP_004233064.1|//PREDICTED: ER lumen protein-retaining receptor A isoform X1 [Solanum lycopersicum]
Solyc10g037890.2.1	2456	2622.71884833616	1082.80172664974	-1.27629406786413	2.6527373340791e-08	Down	2.32663297565533e-09	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460406155|ref|XP_004248537.1|//PREDICTED: uncharacterized protein LOC101260482 [Solanum lycopersicum]
Solyc09g031750.3.1	2269	915.392985146208	103.773615187228	-3.14095155635195	1.37601207716641e-10	Down	8.47313236722419e-12	GO:0016020//membrane	NA	GO:0006810//transport	K08193//MFS transporter, ACS family, solute carrier family 17 (sodium-dependent inorganic phosphate cotransporter), other	gi|970053005|ref|XP_015088130.1|//PREDICTED: sodium-dependent phosphate transport protein 1, chloroplastic [Solanum pennellii];gi|460402936|ref|XP_004246963.1|//PREDICTED: sodium-dependent phosphate transport protein 1, chloroplastic isoform X1 [Solanum lycopersicum];gi|723729424|ref|XP_010326199.1|//PREDICTED: sodium-dependent phosphate transport protein 1, chloroplastic isoform X2 [Solanum lycopersicum]
Solyc07g007810.3.1	3263	552.150471268523	240.614247713245	-1.19833940913037	3.71825597697072e-06	Down	4.8522492080567e-07	NA	GO:0003824//catalytic activity	NA	K20823	gi|460394323|ref|XP_004242753.1|//PREDICTED: N-alpha-acetyltransferase 35, NatC auxiliary subunit [Solanum lycopersicum];gi|971570179|ref|XP_015169362.1|//PREDICTED: N-alpha-acetyltransferase 35, NatC auxiliary subunit isoform X1 [Solanum tuberosum]
Solyc07g066310.3.1	782	91929.7549914122	18367.6832614954	-2.32336222655744	3.44369458753453e-20	Down	6.28973590238526e-22	GO:0009523//photosystem II;GO:0009534//chloroplast thylakoid	NA	GO:0044237//cellular metabolic process	K03541//photosystem II 10kDa protein	gi|350537547|ref|NP_001234042.1|//photosystem II 10 kDa polypeptide, chloroplastic [Solanum lycopersicum]
Solyc06g073920.3.1	1234	499.314235316479	139.225909138743	-1.84252032470995	0.0119166494475624	Down	0.00355793805259337	NA	NA	NA	NA	gi|460391495|ref|XP_004241356.1|//PREDICTED: putative axial regulator YABBY 2 isoform X2 [Solanum lycopersicum]
Solyc08g080440.2.1	1158	33.3895005864948	2.05090344939564	-4.02506303426328	0.000485759746304365	Down	9.97665201333327e-05	NA	NA	NA	NA	gi|723724512|ref|XP_010325429.1|//PREDICTED: protein HAPLESS 2 [Solanum lycopersicum]
Solyc04g025450.2.1	1815	113.018231016857	37.3352218131774	-1.59794630572895	0.0428048186821711	Down	0.0155787330256716	NA	NA	NA	K00666//fatty-acyl-CoA synthase [EC:6.2.1.-]	gi|970014302|ref|XP_015068136.1|//PREDICTED: probable acyl-activating enzyme 2 [Solanum pennellii];gi|460377472|ref|XP_004234517.1|//PREDICTED: probable acyl-activating enzyme 2 [Solanum lycopersicum]
Solyc01g110480.3.1	2526	2375.18751247764	6501.95692961838	1.45283258582938	0.000245404032431324	Up	4.70629099023095e-05	NA	NA	NA	K20557;K09060//plant G-box-binding factor;K04374//cyclic AMP-dependent transcription factor ATF-4	gi|460370118|ref|XP_004230901.1|//PREDICTED: probable transcription factor PosF21 [Solanum lycopersicum]
Solyc01g097240.3.1	475	2244.3685553939	7454.25594159632	1.73175474953673	0.00803373355855301	Up	0.00228363098693623	GO:0030312//external encapsulating structure	NA	GO:0006952//defense response	NA	gi|350538353|ref|NP_001234083.1|//pathogenesis-related protein P2 precursor [Solanum lycopersicum]
Solyc04g048950.3.1	2747	267.342930220238	3088.49685820926	3.53014143225782	9.34992927394031e-18	Up	2.20260746277407e-19	NA	NA	NA	K07119//uncharacterized protein;K01183//chitinase [EC:3.2.1.14];K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460383691|ref|XP_004237552.1|//PREDICTED: MACPF domain-containing protein At4g24290 isoform X1 [Solanum lycopersicum];gi|460383693|ref|XP_004237553.1|//PREDICTED: MACPF domain-containing protein At4g24290 isoform X2 [Solanum lycopersicum]
Solyc03g078490.3.1	1642	1678.48502368765	14701.9893440007	3.13077981135149	0.000115090085428377	Up	2.04329087854241e-05	NA	GO:0016757//transferase activity, transferring glycosyl groups	NA	K04628//2-hydroxyacylsphingosine 1-beta-galactosyltransferase [EC:2.4.1.45];K13030//cyanohydrin beta-glucosyltransferase [EC:2.4.1.85]	gi|460378617|ref|XP_004235065.1|//PREDICTED: 7-deoxyloganetin glucosyltransferase-like [Solanum lycopersicum]
Solyc05g055310.3.1	616	3283.86831590202	1478.54638817954	-1.15121676823337	0.00822382795659622	Down	0.00234195786448469	NA	GO:0043169//cation binding	GO:0006812//cation transport	K07213//copper chaperone	gi|350538525|ref|NP_001234347.1|//copper chaperone [Solanum lycopersicum]
Solyc06g073020.3.1	3046	327.275051229232	715.705707311298	1.12886285698838	0.00951916139768613	Up	0.00276832030806423	GO:0044464//cell part	NA	NA	NA	gi|565361140|ref|XP_006347317.1|//PREDICTED: stomatin-like protein 2, mitochondrial [Solanum tuberosum]
Solyc10g079900.2.1	2294	1.389892959582	10.8514476118257	2.9648418293918	0.0175077925573761	Up	0.00551637731055242	NA	NA	NA	K14487//auxin responsive GH3 gene family	gi|723738374|ref|XP_010312114.1|//PREDICTED: uncharacterized protein LOC104644364 [Solanum lycopersicum]
Solyc01g098130.2.1	882	668.173289732052	2818.12121772597	2.07643945146934	0.000276861861720179	Up	5.37046790067023e-05	NA	NA	NA	K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]	gi|971551310|ref|XP_015164435.1|//PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like isoform X2 [Solanum tuberosum];gi|971551308|ref|XP_015164434.1|//PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like isoform X1 [Solanum tuberosum]
Solyc12g007180.2.1	2547	222.690559830476	1230.8791859965	2.46657685784892	4.28946831466387e-12	Up	2.09772716148762e-13	NA	NA	NA	NA	gi|723747525|ref|XP_010313729.1|//PREDICTED: protein tesmin/TSO1-like CXC 5 isoform X1 [Solanum lycopersicum];gi|460412455|ref|XP_004251614.1|//PREDICTED: protein tesmin/TSO1-like CXC 5 isoform X2 [Solanum lycopersicum]
Solyc01g102880.2.1	4288	144.985695737995	424.490759404323	1.54982257734558	0.00884106866652982	Up	0.00253981348639277	NA	NA	NA	K03283//heat shock 70kDa protein 1/8;K19613//leucine-rich repeat protein SHOC2;K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|723663600|ref|XP_010314215.1|//PREDICTED: TMV resistance protein N-like [Solanum lycopersicum];gi|969999302|ref|XP_015082006.1|//PREDICTED: uncharacterized protein LOC107025773 [Solanum pennellii]
Solyc07g066070.3.1	1423	1600.71935138364	3776.08128433372	1.23816943337568	6.55303755007994e-06	Up	8.98148168765616e-07	NA	GO:0003676//nucleic acid binding	NA	K14945//protein quaking	gi|723717872|ref|XP_010324228.1|//PREDICTED: KH domain-containing protein At5g56140 isoform X4 [Solanum lycopersicum];gi|460396896|ref|XP_004244006.1|//PREDICTED: KH domain-containing protein At5g56140 isoform X2 [Solanum lycopersicum];gi|460396898|ref|XP_004244007.1|//PREDICTED: KH domain-containing protein At5g56140 isoform X3 [Solanum lycopersicum]
Solyc03g063030.3.1	2317	381.84477237978	88.4411761452684	-2.11019615649256	0.00238997674845918	Down	0.000583062390735996	NA	NA	NA	K15015//solute carrier family 32 (vesicular inhibitory amino acid transporter)	gi|697160215|ref|XP_009588888.1|//PREDICTED: vacuolar amino acid transporter 1-like isoform X2 [Nicotiana tomentosiformis];gi|460378093|ref|XP_004234813.1|//PREDICTED: vacuolar amino acid transporter 1-like [Solanum lycopersicum]
Solyc01g103110.3.1	2105	2914.22001767333	585.027946682168	-2.31653235330693	2.02545881728789e-10	Down	1.28422001200488e-11	NA	NA	NA	K09919//uncharacterized protein	gi|460369137|ref|XP_004230420.1|//PREDICTED: uncharacterized protein LOC101258197 [Solanum lycopersicum];gi|971553739|ref|XP_015165013.1|//PREDICTED: uncharacterized protein LOC102578218 isoform X1 [Solanum tuberosum]
Solyc07g064100.1.1	609	469.4269089401	102.699279982075	-2.192474476731	4.86166566833634e-06	Down	6.4857244024809e-07	NA	NA	NA	NA	gi|723718427|ref|XP_010324328.1|//PREDICTED: uncharacterized protein LOC104648556 [Solanum lycopersicum]
Solyc02g063300.3.1	739	502.722084570069	144.443076657201	-1.7992600126594	3.26284164762874e-07	Down	3.47835362763464e-08	NA	NA	NA	NA	gi|460375374|ref|XP_004233481.1|//PREDICTED: uncharacterized protein LOC101254057 [Solanum lycopersicum]
Solyc03g111080.3.1	7823	0.594888612662052	402.47581010078	9.4020667980372	1.32961372654617e-17	Up	3.19666338758864e-19	NA	NA	NA	K11684//bromodomain-containing factor 1;K11721//bromodomain-containing protein 3;K11724//bromodomain testis-specific protein	gi|723688267|ref|XP_010319067.1|//PREDICTED: transcription factor GTE10 [Solanum lycopersicum]
Solyc09g014400.3.1	1645	351.242874691598	51.4144927159675	-2.77222197043598	1.63905813530724e-10	Down	1.02395312165459e-11	NA	NA	NA	K15535//phosphoglucan, water dikinase [EC:2.7.9.5]	gi|460401654|ref|XP_004246332.1|//PREDICTED: uncharacterized protein LOC101251213 [Solanum lycopersicum]
Solyc03g006620.3.1	1340	589.387367039276	6159.1828837805	3.38545092344914	5.83952757856476e-06	Up	7.92302086848656e-07	NA	NA	NA	NA	gi|460376694|ref|XP_004234132.1|//PREDICTED: uncharacterized protein LOC101263673 [Solanum lycopersicum]
BGI_novel_G000384	3514	23.9723208204623	115.568879337709	2.26931146600552	3.87356571172639e-07	Up	4.19727729386783e-08	NA	NA	NA	K02261//cytochrome c oxidase subunit 2	gi|723735484|ref|XP_010327299.1|//PREDICTED: uncharacterized protein LOC104649534 [Solanum lycopersicum]
Solyc01g102400.3.1	1128	146.982825887949	338.389707869205	1.20303809537037	0.00271972477971074	Up	0.000674659624607685	GO:0005576//extracellular region	GO:0016209//antioxidant activity;GO:0046914//transition metal ion binding;GO:0003824//catalytic activity;GO:0004871//signal transducer activity	GO:0008152//metabolic process	K11426//SET and MYND domain-containing protein	gi|460369045|ref|XP_004230375.1|//PREDICTED: germin-like protein 5-1 [Solanum lycopersicum]
Solyc08g076010.3.1	5117	82.9527551366116	418.174966350178	2.33374489514977	1.40878090635746e-07	Up	1.40678546598018e-08	NA	GO:0043531//ADP binding;GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding	GO:0012501//programmed cell death;GO:0006952//defense response;GO:0006950//response to stress	K19613//leucine-rich repeat protein SHOC2;K15078//structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]	gi|460400806|ref|XP_004245923.1|//PREDICTED: putative disease resistance protein RGA4 [Solanum lycopersicum]
Solyc12g099515.1.1	5838	328.653127696755	659.569410925133	1.00495877714229	0.00396970823434134	Up	0.00103237864734604	NA	NA	NA	K11491//condensin-2 complex subunit D3	gi|460415608|ref|XP_004253150.1|//PREDICTED: condensin-2 complex subunit D3 [Solanum lycopersicum]
Solyc02g080890.3.1	1894	257.76962487848	7701.31812662602	4.90095121865129	5.33217790666238e-15	Up	1.70729865134299e-16	NA	GO:0043565//sequence-specific DNA binding;GO:0003700//transcription factor activity, sequence-specific DNA binding	GO:0006355//regulation of transcription, DNA-templated	K10268//F-box and leucine-rich repeat protein 2/20;K13424//WRKY transcription factor 33;K01892//histidyl-tRNA synthetase [EC:6.1.1.21]	gi|723673792|ref|XP_010316577.1|//PREDICTED: probable WRKY transcription factor 31 isoform X1 [Solanum lycopersicum];gi|460373783|ref|XP_004232693.1|//PREDICTED: probable WRKY transcription factor 31 isoform X2 [Solanum lycopersicum]
Solyc01g111750.3.1	3944	3278.16569374623	1385.24467085711	-1.24274795990669	0.0118582090808778	Down	0.00353916356458135	NA	NA	NA	K02147//V-type H+-transporting ATPase subunit B	gi|723666425|ref|XP_010315389.1|//PREDICTED: uncharacterized protein LOC101245406 [Solanum lycopersicum]
Solyc03g121170.3.1	2024	195.259993641782	19.1295600218945	-3.35152079180151	0.00132273313013363	Down	0.000301938932791797	NA	GO:0016787//hydrolase activity	GO:0044238//primary metabolic process	K21026;K01188//beta-glucosidase [EC:3.2.1.21];K00679//phospholipid:diacylglycerol acyltransferase [EC:2.3.1.158];K01206//alpha-L-fucosidase [EC:3.2.1.51];K10960//geranylgeranyl reductase [EC:1.3.1.83]	gi|460379769|ref|XP_004235633.1|//PREDICTED: GDSL esterase/lipase APG-like [Solanum lycopersicum]
Solyc03g006570.3.1	4887	746.148734352272	1754.75201618893	1.23373201600552	0.00706269591387521	Up	0.00197678912486941	NA	GO:0046872//metal ion binding	NA	K15173//transcription termination factor 2 [EC:3.6.4.-];K15083//DNA repair protein RAD16	gi|723678929|ref|XP_004234259.2|//PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 1 [Solanum lycopersicum]
Solyc09g090720.3.1	1579	1111.47667269425	2231.32978315523	1.00542608501665	0.000206163372383804	Up	3.89303580026969e-05	NA	NA	NA	K03039//26S proteasome regulatory subunit N9	gi|460404608|ref|XP_004247773.1|//PREDICTED: 26S proteasome non-ATPase regulatory subunit 13 homolog B [Solanum lycopersicum]
Solyc02g071890.3.1	2029	1401.30606272984	645.407032194017	-1.11849089051565	0.000115153087054802	Down	2.04524852261366e-05	NA	NA	NA	K00013//histidinol dehydrogenase [EC:1.1.1.23]	gi|460374461|ref|XP_004233029.1|//PREDICTED: histidinol dehydrogenase, chloroplastic isoform X1 [Solanum lycopersicum];gi|565384039|ref|XP_006358080.1|//PREDICTED: histidinol dehydrogenase, chloroplastic isoform X1 [Solanum tuberosum]
Solyc05g009080.3.1	2144	1178.08923369957	60.0879392743428	-4.29322956393897	7.05165593739106e-10	Down	4.89158032633248e-11	NA	NA	NA	NA	gi|460386446|ref|XP_004238909.1|//PREDICTED: uncharacterized protein LOC101248774 [Solanum lycopersicum]
Solyc08g006500.3.1	3567	32.768917355075	316.136002721103	3.27014543006996	5.80627570141643e-07	Up	6.47330051548254e-08	GO:0044464//cell part	GO:0005215//transporter activity	NA	K05387//glutamate receptor, ionotropic, plant	gi|460397882|ref|XP_004244494.1|//PREDICTED: glutamate receptor 2.8-like [Solanum lycopersicum]
Solyc02g067310.3.1	1245	1269.27336070654	193.479412889029	-2.71375084263281	3.8284343308279e-05	Down	6.13051807262437e-06	NA	NA	NA	NA	gi|460375136|ref|XP_004233363.1|//PREDICTED: zinc-finger homeodomain protein 9-like [Solanum lycopersicum]
Solyc10g079970.2.1	3048	671.377324770365	1520.40731354787	1.17926215295594	4.63287418951928e-06	Up	6.15805477852459e-07	NA	NA	NA	K13495//cis-zeatin O-glucosyltransferase [EC:2.4.1.215]	gi|460407624|ref|XP_004249251.1|//PREDICTED: transmembrane protein 19 [Solanum lycopersicum];gi|970058505|ref|XP_015055954.1|//PREDICTED: zeatin O-xylosyltransferase-like isoform X2 [Solanum pennellii];gi|723738387|ref|XP_010312115.1|//PREDICTED: zeatin O-xylosyltransferase-like isoform X2 [Solanum lycopersicum]
Solyc01g010220.3.1	832	232.051009057548	817.54679910438	1.81685934666842	7.19651752428566e-06	Up	9.9546281991293e-07	NA	NA	NA	NA	gi|460365045|ref|XP_004228416.1|//PREDICTED: uncharacterized protein LOC101259565 [Solanum lycopersicum]
Solyc02g091290.3.1	1660	760.571538264755	256.800512106011	-1.56643587269783	1.64621301178391e-05	Down	2.44782578926006e-06	NA	GO:0016742//hydroxymethyl-, formyl- and related transferase activity	GO:0006412//translation;GO:0019988//charged-tRNA amino acid modification	K00604//methionyl-tRNA formyltransferase [EC:2.1.2.9]	gi|723669967|ref|XP_010316070.1|//PREDICTED: methionyl-tRNA formyltransferase, mitochondrial isoform X1 [Solanum lycopersicum];gi|723669970|ref|XP_010316071.1|//PREDICTED: methionyl-tRNA formyltransferase, mitochondrial isoform X2 [Solanum lycopersicum]
Solyc10g080540.2.1	1151	27.6627193420919	3.10064515354773	-3.15730265095122	0.00055202314703035	Down	0.000115063122043899	NA	NA	NA	K09338//homeobox-leucine zipper protein	gi|460407701|ref|XP_004249289.1|//PREDICTED: homeobox-leucine zipper protein HOX11-like [Solanum lycopersicum]
Solyc10g005630.3.1	2262	9.48927397243954	248.277885606493	4.70951424414137	1.73406317629585e-13	Up	6.9160861735372e-15	NA	GO:0004713//protein tyrosine kinase activity;GO:0032559//adenyl ribonucleotide binding	GO:0006464//cellular protein modification process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460405769|ref|XP_004248347.1|//PREDICTED: putative serine/threonine-protein kinase [Solanum lycopersicum]
Solyc08g061450.2.1	1864	27.2609720201522	67.1234933545504	1.29998079696102	0.0239465604574098	Up	0.00793963975207469	NA	NA	NA	K12589//exosome complex component RRP42	gi|460399012|ref|XP_004245039.1|//PREDICTED: uncharacterized protein LOC101264957 [Solanum lycopersicum]
Solyc11g062390.2.1	2116	642.959281083507	1317.75404865289	1.03528184559739	0.00152936319580871	Up	0.000354749782597198	NA	NA	NA	K12176//COP9 signalosome complex subunit 2;K11674//microspherule protein 1;K10406//kinesin family member C2/C3	gi|976898925|gb|KVH87697.1|//hypothetical protein Ccrd_025017 [Cynara cardunculus var. scolymus];gi|460410961|ref|XP_004250883.1|//PREDICTED: uncharacterized protein LOC101257435 [Solanum lycopersicum]
Solyc04g079410.3.1	1443	166.395444491874	669.549576125838	2.00857494591963	1.99598637194262e-11	Up	1.0750709361328e-12	NA	NA	NA	K01810//glucose-6-phosphate isomerase [EC:5.3.1.9]	gi|460384988|ref|XP_004238188.1|//PREDICTED: protein OSB1, mitochondrial-like [Solanum lycopersicum]
Solyc07g006130.2.1	2176	132.25670019922	714.17247324475	2.43293171644398	8.27753777777384e-06	Up	1.163199546079e-06	GO:0005737//cytoplasm	GO:0016149//translation release factor activity, codon specific	GO:0006415//translational termination	K03265//peptide chain release factor subunit 1	gi|460394082|ref|XP_004242634.1|//PREDICTED: eukaryotic peptide chain release factor subunit 1-3-like [Solanum lycopersicum]
Solyc01g098210.3.1	1274	147.404932650703	494.996684451445	1.74763405934519	1.54910428964174e-09	Up	1.13001233592846e-10	NA	NA	NA	NA	gi|969997097|ref|XP_015066071.1|//PREDICTED: transmembrane protein adipocyte-associated 1 [Solanum pennellii];gi|460368591|ref|XP_004230149.1|//PREDICTED: transmembrane protein adipocyte-associated 1 [Solanum lycopersicum]
Solyc05g050700.1.1	1236	28.3801221758823	5.89227772531792	-2.26798346342769	0.00188306447840503	Down	0.000447252380214583	NA	NA	NA	K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|460389246|ref|XP_004240268.1|//PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2 [Solanum lycopersicum]
Solyc09g009170.3.1	1065	1139.74156306733	443.263798567068	-1.36246928243009	0.000427605157925187	Down	8.67068756192418e-05	NA	GO:0003824//catalytic activity	NA	K04382//serine/threonine-protein phosphatase 2A catalytic subunit [EC:3.1.3.16]	gi|929524241|ref|NP_001234777.2|//protein ACI14 [Solanum lycopersicum]
Solyc01g099925.1.1	528	17.2944487974687	3.31513051021029	-2.38317146072631	0.0149539248557754	Down	0.00461192687701973	NA	NA	NA	K01051//pectinesterase [EC:3.1.1.11]	gi|969997861|ref|XP_015069733.1|//PREDICTED: pectinesterase [Solanum pennellii]
Solyc06g071810.1.1	1878	1601.47899236101	12941.7942958415	3.0145608729254	0.000104178280005744	Up	1.82665360499112e-05	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity;GO:0004871//signal transducer activity	GO:0006464//cellular protein modification process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|937346074|ref|NP_001302425.1|//leucine-rich repeat receptor-like serine/threonine/tyrosine-protein kinase SOBIR1 precursor [Solanum lycopersicum]
Solyc09g098160.3.1	994	57.2518579565705	926.527095022258	4.01643874861273	1.60687539625791e-13	Up	6.37886647165155e-15	GO:0043231//intracellular membrane-bounded organelle	NA	NA	K06911//uncharacterized protein	gi|350537409|ref|NP_001234292.1|//pirin-like protein [Solanum lycopersicum]
Solyc02g077140.3.1	1793	354.967657260678	2.63331993746823	-7.07466095627925	7.11940893773856e-24	Down	8.99612207355514e-26	NA	NA	NA	K00145//N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]	gi|970006787|ref|XP_015064257.1|//PREDICTED: phospholipase A1-II 1-like [Solanum pennellii]
Solyc09g056350.3.1	3385	855.782196002034	400.460859263423	-1.09558242331139	0.000578584086986844	Down	0.000121289581974579	NA	NA	NA	K18875//enhanced disease susceptibility 1 protein	gi|460403091|ref|XP_004247034.1|//PREDICTED: uncharacterized protein LOC101261153 [Solanum lycopersicum]
Solyc10g049800.2.1	2716	200.991873425724	95.8208716038564	-1.06872532937316	0.00272961899597244	Down	0.000677520981593131	NA	NA	NA	NA	gi|460406629|ref|XP_004248764.1|//PREDICTED: uncharacterized protein LOC101255740 [Solanum lycopersicum]
Solyc06g083070.3.1	2398	1293.22539700729	392.702681292372	-1.719464391649	1.03471975264176e-06	Down	1.22031209831464e-07	NA	GO:0046872//metal ion binding	NA	K17275//plastin-1	gi|460393682|ref|XP_004242438.1|//PREDICTED: fimbrin-5 [Solanum lycopersicum]
Solyc07g049550.3.1	1334	51.3402783256212	229.445504473063	2.1599885181186	0.00296249395857355	Up	0.000741396467789727	NA	GO:0043169//cation binding;GO:0016641//oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor;GO:0019842//vitamin binding	GO:0003006//developmental process involved in reproduction;GO:0009692//ethylene metabolic process	K05933//aminocyclopropanecarboxylate oxidase [EC:1.14.17.4]	gi|350535240|ref|NP_001233928.1|//1-aminocyclopropane-1-carboxylate oxidase 4 [Solanum lycopersicum]
Solyc10g083290.4.1	2007	248.115788981758	8059.1278522989	5.02153827079344	4.63136737087563e-20	Up	8.64885587001897e-22	NA	GO:0016798//hydrolase activity, acting on glycosyl bonds	GO:0044238//primary metabolic process	K01193//beta-fructofuranosidase [EC:3.2.1.26]	gi|922960006|ref|NP_001233842.2|//acid invertase [Solanum lycopersicum]
Solyc01g089860.2.1	911	569.13951808485	1480.41099207413	1.37914349152997	0.000153439032906487	Up	2.81505656129376e-05	NA	NA	NA	NA	gi|723660281|ref|XP_010325181.1|//PREDICTED: uncharacterized protein DDB_G0283697 [Solanum lycopersicum]
Solyc08g006680.3.1	2777	206.374115861717	1025.42572689256	2.31288905952064	1.04735147821793e-07	Up	1.0248286471889e-08	NA	NA	NA	NA	gi|460397915|ref|XP_004244510.1|//PREDICTED: probable folate-biopterin transporter 2 [Solanum lycopersicum]
Solyc03g005320.3.1	1734	299.458862513741	55.1106144599486	-2.44195571183635	0.000910564479621071	Down	0.000200658163244363	GO:0044464//cell part	GO:0016747//transferase activity, transferring acyl groups other than amino-acyl groups	GO:0006631//fatty acid metabolic process	K15397//3-ketoacyl-CoA synthase [EC:2.3.1.199]	gi|460376478|ref|XP_004234025.1|//PREDICTED: 3-ketoacyl-CoA synthase 11-like [Solanum lycopersicum]
Solyc02g073572.1.1	3405	201.667509756477	36.3448020229033	-2.4721577209914	2.50459401790735e-07	Down	2.61307538993689e-08	NA	NA	NA	K19613//leucine-rich repeat protein SHOC2;K14431//transcription factor TGA;K15078//structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]	gi|970007060|ref|XP_015064398.1|//PREDICTED: transcription factor TGA5-like [Solanum pennellii];gi|723675159|ref|XP_010316824.1|//PREDICTED: putative disease resistance protein RGA3 [Solanum lycopersicum]
Solyc04g005910.3.1	2139	124.320715784719	356.171409589393	1.51850499850925	5.23718208273297e-05	Up	8.61281025384594e-06	GO:0031224//intrinsic component of membrane	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process	K13418//somatic embryogenesis receptor kinase 1 [EC:2.7.10.1 2.7.11.1];K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460382458|ref|XP_004236956.1|//PREDICTED: protein NSP-INTERACTING KINASE 2 [Solanum lycopersicum]
Solyc07g006035.1.1	6624	14164.5088915289	505.317589410873	-4.8089463725181	3.34017204849665e-48	Down	5.60264433361969e-51	NA	GO:0005488//binding	NA	K03255//protein TIF31	gi|723712262|ref|XP_010323210.1|//PREDICTED: clustered mitochondria protein homolog isoform X2 [Solanum lycopersicum];gi|723712259|ref|XP_010323209.1|//PREDICTED: clustered mitochondria protein homolog isoform X1 [Solanum lycopersicum]
Solyc04g079730.1.1	1605	625.319376518196	3292.8044726238	2.39665171970071	6.2334892895488e-06	Up	8.5086617632055e-07	NA	NA	NA	K01723//hydroperoxide dehydratase [EC:4.2.1.92]	gi|924183868|ref|NP_001234833.2|//allene oxide synthase [Solanum lycopersicum]
Solyc03g082990.3.1	2967	429.801943439151	132.966731766021	-1.69260667719202	5.4684856184095e-09	Down	4.33760898910669e-10	NA	NA	NA	NA	gi|723682279|ref|XP_010318032.1|//PREDICTED: nephrocystin-3 isoform X2 [Solanum lycopersicum];gi|971556102|ref|XP_006350525.2|//PREDICTED: nephrocystin-3 isoform X2 [Solanum tuberosum];gi|723682270|ref|XP_010318029.1|//PREDICTED: nephrocystin-3 isoform X1 [Solanum lycopersicum]
Solyc01g108470.2.1	1504	0.428201580517198	7.31731547187574	4.09495243327879	0.0119210698748083	Up	0.00355974116462458	NA	NA	NA	K16297//serine carboxypeptidase-like clade II [EC:3.4.16.-]	gi|969999387|ref|XP_015082650.1|//PREDICTED: uncharacterized protein LOC107026257 [Solanum pennellii]
Solyc09g065420.3.1	767	16.1935186334155	0.471856824133639	-5.10092351971038	0.000588158382841337	Down	0.000123472044586343	NA	NA	NA	NA	gi|460403410|ref|XP_004247184.1|//PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Solanum lycopersicum]
Solyc02g085025.1.1	2355	33.9538910744057	1.16442775601348	-4.86588387597317	7.68771874723702e-06	Down	1.07174575827709e-06	NA	GO:0003824//catalytic activity;GO:0050662//coenzyme binding	NA	K13082//bifunctional dihydroflavonol 4-reductase/flavanone 4-reductase [EC:1.1.1.219 1.1.1.234]	gi|723672327|ref|XP_010316381.1|//PREDICTED: LOW QUALITY PROTEIN: auxilin-like protein 1 [Solanum lycopersicum];gi|71983508|gb|AAZ57436.1|//dihydroflavonol reductase [Solanum tuberosum]
Solyc08g007230.2.1	597	25.7515710985374	256.573340198139	3.31663891325203	0.000117777813662868	Up	2.09539848148526e-05	NA	NA	NA	K09286//EREBP-like factor	gi|723719874|ref|XP_004244707.2|//PREDICTED: ethylene-responsive transcription factor 2-like [Solanum lycopersicum]
Solyc11g011130.2.1	2461	3740.88321465241	14534.8838009615	1.95806870520002	6.18040218170495e-09	Up	4.95528742092118e-10	GO:0005730//nucleolus	GO:0003676//nucleic acid binding	NA	K12881//THO complex subunit 4	gi|970063000|ref|XP_015058414.1|//PREDICTED: THO complex subunit 4D [Solanum pennellii];gi|971549542|ref|XP_015163989.1|//PREDICTED: THO complex subunit 4D isoform X2 [Solanum tuberosum]
Solyc12g009070.1.1	633	9342.85136900559	450.404013530129	-4.37457132859319	1.11505130383991e-14	Down	3.76144859838646e-16	NA	NA	NA	K02259//cytochrome c oxidase assembly protein subunit 15	gi|460412597|ref|XP_004251684.1|//PREDICTED: uncharacterized protein LOC101248173 [Solanum lycopersicum];gi|460412599|ref|XP_004251685.1|//PREDICTED: uncharacterized protein LOC101248456 [Solanum lycopersicum]
Solyc10g081040.1.1	588	745.688947677985	3806.53683894734	2.35183317669063	0.00056153502610711	Up	0.000117255077391234	NA	NA	NA	NA	gi|460407788|ref|XP_004249332.1|//PREDICTED: uncharacterized protein LOC101251527 [Solanum lycopersicum]
Solyc01g014375.1.1	1056	172.931380232914	2.36238876495891	-6.19380947438926	7.23283069304503e-13	Down	3.15701682628438e-14	NA	NA	NA	NA	gi|460365877|ref|XP_004228822.1|//PREDICTED: uncharacterized protein LOC101266150 [Solanum lycopersicum];gi|970003989|ref|XP_015062779.1|//PREDICTED: IRK-interacting protein-like [Solanum pennellii]
Solyc10g005480.3.1	815	117.609010454744	2640.991628762	4.4890092289103	1.90362652399064e-26	Up	1.8732570535766e-28	NA	NA	NA	NA	gi|460405830|ref|XP_004248377.1|//PREDICTED: F-box protein SKIP27 [Solanum lycopersicum]
Solyc08g079770.3.1	4992	72.9623408363592	9.70050379923918	-2.9110204346883	0.0122565261475362	Down	0.00367129283292086	NA	NA	NA	K20716	gi|460400326|ref|XP_004245686.1|//PREDICTED: guard cell S-type anion channel SLAC1 [Solanum lycopersicum]
Solyc08g061210.3.1	1340	151.467533279489	405.604624667341	1.42106551347159	0.00173571109732586	Up	0.000408048676413977	NA	NA	NA	NA	NA
Solyc04g050470.3.1	2856	1850.95001575876	850.013746180604	-1.12270785886683	1.55269428111743e-05	Down	2.29651517350305e-06	NA	NA	NA	K07573//exosome complex component CSL4;K03320//ammonium transporter, Amt family	gi|723692591|ref|XP_010319825.1|//PREDICTED: uncharacterized protein LOC101247210 isoform X3 [Solanum lycopersicum];gi|970022656|ref|XP_015072642.1|//PREDICTED: uncharacterized protein LOC107016805 [Solanum pennellii]
Solyc01g098710.3.1	2770	369.544431525216	1156.4093204922	1.64583240207294	0.00398041403608716	Up	0.00103545957797273	NA	NA	NA	K00924;K01381//saccharopepsin [EC:3.4.23.25]	gi|565392358|ref|XP_006361871.1|//PREDICTED: aspartic proteinase-like protein 2 isoform X2 [Solanum tuberosum];gi|460368636|ref|XP_004230171.1|//PREDICTED: aspartic proteinase-like protein 2 [Solanum lycopersicum]
Solyc12g045030.2.1	1188	2721.35690091065	26276.892676079	3.27139660170354	6.71244077571269e-06	Up	9.22247528674407e-07	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K00059//3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100];K10256//omega-6 fatty acid desaturase / acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.6 1.14.19.22]	gi|723751149|ref|XP_010314314.1|//PREDICTED: probable L-xylulose reductase [Solanum lycopersicum]
Solyc09g072880.3.1	1364	979.625688470693	349.248072870937	-1.48797845086077	0.000769081940408099	Down	0.000166261091128944	NA	NA	NA	NA	gi|723731689|ref|XP_010326635.1|//PREDICTED: protein FLUORESCENT IN BLUE LIGHT, chloroplastic-like isoform X2 [Solanum lycopersicum];gi|460404046|ref|XP_004247496.1|//PREDICTED: protein FLUORESCENT IN BLUE LIGHT, chloroplastic-like isoform X1 [Solanum lycopersicum]
Solyc05g008270.3.1	1596	1340.63388622317	401.708056808071	-1.73869600334533	1.60931421198977e-07	Down	1.62503063973471e-08	NA	NA	NA	NA	gi|460386332|ref|XP_004238852.1|//PREDICTED: uncharacterized protein LOC101257662 [Solanum lycopersicum]
Solyc02g068660.2.1	2276	94.6038201729718	811.043334257168	3.09980865311705	1.17129824768255e-07	Up	1.15610472635433e-08	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723676455|ref|XP_010317039.1|//PREDICTED: wall-associated receptor kinase-like 1 [Solanum lycopersicum]
Solyc10g084140.2.1	2842	692.529527280504	3002.33327083844	2.11613664112515	3.35458422296388e-07	Up	3.58991028184334e-08	NA	NA	NA	K01772//ferrochelatase [EC:4.99.1.1]	gi|460408110|ref|XP_004249490.1|//PREDICTED: ferrochelatase-2, chloroplastic isoform X1 [Solanum lycopersicum]
Solyc07g032480.3.1	2666	852.456019077032	3361.74128820573	1.97951139445542	1.90092401385803e-06	Up	2.35312682645837e-07	GO:0005634//nucleus;GO:0000307//cyclin-dependent protein kinase holoenzyme complex	GO:0016538//cyclin-dependent protein serine/threonine kinase regulator activity	GO:1901409//positive regulation of phosphorylation of RNA polymerase II C-terminal domain;GO:0045944//positive regulation of transcription from RNA polymerase II promoter;GO:0045737//positive regulation of cyclin-dependent protein serine/threonine kinase activity	K15188//cyclin T	gi|970038137|ref|XP_015080406.1|//PREDICTED: cyclin-T1-3-like [Solanum pennellii]
Solyc03g082450.3.1	5622	205.431463980632	36.0216437006561	-2.51172124307984	3.69184782174996e-05	Down	5.89528703905503e-06	NA	NA	NA	K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460378725|ref|XP_004235119.1|//PREDICTED: receptor-like protein kinase [Solanum lycopersicum]
Solyc11g073080.2.1	1853	43.8566516240054	1795.60387140221	5.35552963259898	1.67160640722956e-15	Up	5.07189360177749e-17	NA	NA	NA	NA	gi|460412129|ref|XP_004251455.1|//PREDICTED: methyl-CpG-binding domain-containing protein 7 isoform X1 [Solanum lycopersicum]
Solyc05g023820.3.1	621	230.293032082484	464.56872145869	1.01242126292798	0.00373006723460478	Up	0.000963799987709868	NA	NA	NA	K15340//DNA cross-link repair 1A protein	gi|460387824|ref|XP_004239573.1|//PREDICTED: myb-like protein A [Solanum lycopersicum]
Solyc04g076800.3.1	2687	686.226586030782	64.9453325335279	-3.40138726892244	1.1264921678238e-15	Down	3.35915362404592e-17	NA	NA	NA	K06066//CBF1 interacting corepressor;K11000//callose synthase [EC:2.4.1.-]	gi|460384664|ref|XP_004238030.1|//PREDICTED: putative pentatricopeptide repeat-containing protein At5g52630 [Solanum lycopersicum]
Solyc01g097825.1.1	1117	14.6958318172142	0.716718826741109	-4.35785595919911	0.000692189630219287	Down	0.000147685009817176	NA	NA	NA	NA	gi|565362113|ref|XP_006347796.1|//PREDICTED: uncharacterized protein LOC102598829 [Solanum tuberosum]
Solyc05g014690.2.1	3968	79.1529378063596	18.1343045265802	-2.125921480607	0.0264580378741113	Down	0.00891435084031953	NA	NA	NA	K10730//ATP-dependent DNA helicase Q4 [EC:3.6.4.12]	gi|723699165|ref|XP_010320976.1|//PREDICTED: ATP-dependent DNA helicase Q-like 5 [Solanum lycopersicum]
Solyc10g085225.1.1	1826	2691.20387582262	456.318944898357	-2.56013723224185	7.34808587685693e-06	Down	1.01971536154534e-06	NA	NA	NA	K07964//heparanase 1 [EC:3.2.1.166]	gi|460408338|ref|XP_004249602.1|//PREDICTED: heparanase-like protein 3 [Solanum lycopersicum]
Solyc04g005500.3.1	4103	733.919199184091	243.741658512753	-1.59026839148762	1.87649170180658e-09	Down	1.3889583511786e-10	NA	NA	NA	NA	gi|460382991|ref|XP_004237219.1|//PREDICTED: uncharacterized protein LOC101267700 isoform X1 [Solanum lycopersicum];gi|723690666|ref|XP_010319459.1|//PREDICTED: uncharacterized protein LOC101267700 isoform X2 [Solanum lycopersicum]
Solyc05g015510.3.1	3601	684.690044751024	186.07440696889	-1.87957139810376	8.83245924894321e-05	Down	1.52464286498643e-05	GO:0005634//nucleus	GO:0003677//DNA binding	NA	K20641;K13415//protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1]	gi|460387080|ref|XP_004239217.1|//PREDICTED: squamosa promoter-binding-like protein 12 [Solanum lycopersicum]
Solyc06g065400.3.1	1741	311.940696620688	853.735597498086	1.45251755251365	0.00044524688946696	Up	9.06326697248795e-05	NA	NA	NA	K16302//metal transporter CNNM	gi|970032397|ref|XP_015077504.1|//PREDICTED: uncharacterized membrane protein At4g09580-like [Solanum pennellii]
Solyc01g101130.3.1	2673	288.397302118589	1295.89522830964	2.16781950892586	6.2072129682599e-05	Up	1.03954852640494e-05	NA	NA	NA	K20827;K20283//golgin subfamily A member 4;K12472//epidermal growth factor receptor substrate 15;K09291//nucleoprotein TPR;K06636//structural maintenance of chromosome 1;K10400//kinesin family member 15	gi|969996321|ref|XP_015062576.1|//PREDICTED: myosin-11-like isoform X2 [Solanum pennellii];gi|460369005|ref|XP_004230355.1|//PREDICTED: myosin-11 [Solanum lycopersicum];gi|565385276|ref|XP_006358538.1|//PREDICTED: myosin-11-like isoform X1 [Solanum tuberosum]
Solyc02g085285.1.1	3073	657.666687870205	2853.00061030548	2.11705155368313	5.39516213905443e-07	Up	5.97875989242911e-08	NA	NA	NA	NA	NA
Solyc04g053110.1.1	309	13.2335032491042	0.474262950647858	-4.80236405078782	0.00167943176550539	Down	0.000393047468469588	NA	NA	NA	K03676//glutaredoxin 3	gi|723692292|ref|XP_010319782.1|//PREDICTED: monothiol glutaredoxin-S6-like [Solanum lycopersicum]
Solyc03g118200.3.1	2307	1085.62560740657	3035.80681788757	1.48355333234401	3.56583309707478e-08	Up	3.20058375494113e-09	NA	NA	NA	K16280//E3 ubiquitin-protein ligase RGLG [EC:2.3.2.27]	gi|460380201|ref|XP_004235846.1|//PREDICTED: protein BONZAI 1-like [Solanum lycopersicum];gi|698456243|ref|XP_009780574.1|//PREDICTED: protein BONZAI 1-like [Nicotiana sylvestris];gi|970019109|ref|XP_015070748.1|//PREDICTED: protein BONZAI 1-like isoform X1 [Solanum pennellii]
Solyc07g055360.1.1	228	0.380868123790722	4.28950049324398	3.49344620376177	0.0430986812167939	Up	0.0157017485542323	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723717299|ref|XP_010324079.1|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5, partial [Solanum lycopersicum]
Solyc03g115720.3.1	2007	927.938118488064	239.006460227036	-1.95697898532667	0.000122967797290131	Down	2.1950677695782e-05	NA	NA	NA	K20779;K09553//stress-induced-phosphoprotein 1	gi|723686837|ref|XP_010318821.1|//PREDICTED: LON peptidase N-terminal domain and RING finger protein 1 [Solanum lycopersicum]
Solyc11g007420.1.1	390	64.5010639450528	545.671231459473	3.08063712174199	4.79410941789571e-05	Up	7.80016684401177e-06	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723741012|ref|XP_004249994.2|//PREDICTED: glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2-like [Solanum lycopersicum]
Solyc02g072540.3.1	1690	627.913888377409	66.0637783807729	-3.24863533355953	1.1360565942366e-09	Down	8.12618385395866e-11	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process;GO:0023052//signaling	K07198//5'-AMP-activated protein kinase, catalytic alpha subunit [EC:2.7.11.11]	gi|460374515|ref|XP_004233056.1|//PREDICTED: CBL-interacting serine/threonine-protein kinase 20 [Solanum lycopersicum]
Solyc03g093440.3.1	1734	114.164760305486	48.8421794129462	-1.22491791481159	0.00347471004647244	Down	0.000887716663878115	NA	GO:0004067//asparaginase activity	NA	K01444//N4-(beta-N-acetylglucosaminyl)-L-asparaginase [EC:3.5.1.26]	gi|460379346|ref|XP_004235423.1|//PREDICTED: probable isoaspartyl peptidase/L-asparaginase 3 isoform X1 [Solanum lycopersicum]
Solyc02g081430.3.1	1138	1633.75938959638	8266.79457299598	2.33913250921263	1.66557588071037e-09	Up	1.22242392616622e-10	NA	NA	NA	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|460373717|ref|XP_004232661.1|//PREDICTED: microsomal glutathione S-transferase 3 [Solanum lycopersicum]
Solyc01g091240.3.1	1943	230.337333880879	38.3821390852814	-2.58524124503214	5.00023229064075e-05	Down	8.17653908567205e-06	NA	NA	NA	K15271//ATP-dependent DNA helicase HFM1/MER3 [EC:3.6.4.12];K19589//release factor glutamine methyltransferase [EC:2.1.1.297]	gi|460367900|ref|XP_004229808.1|//PREDICTED: pentatricopeptide repeat-containing protein At2g45350, chloroplastic [Solanum lycopersicum]
Solyc02g062463.1.1	1174	178.88254790059	419.797402664192	1.2306805981719	0.034379878298286	Up	0.0120399042667228	NA	NA	NA	K05282//gibberellin 20-oxidase [EC:1.14.11.12];K05278//flavonol synthase [EC:1.14.11.23];K05933//aminocyclopropanecarboxylate oxidase [EC:1.14.17.4];K04125//gibberellin 2-oxidase [EC:1.14.11.13];K01951//GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]	gi|460375495|ref|XP_004233541.1|//PREDICTED: probable 2-oxoglutarate-dependent dioxygenase AOP1 [Solanum lycopersicum]
Solyc02g085935.1.1	1227	228.953224770995	94.2178848335431	-1.28098003593052	0.00940416500353443	Down	0.00273102167670109	NA	NA	NA	K08867//WNK lysine deficient protein kinase [EC:2.7.11.1]	gi|460373093|ref|XP_004232357.1|//PREDICTED: uncharacterized protein LOC101268635 [Solanum lycopersicum]
Solyc12g042920.2.1	1534	7622.31842726955	2260.23552992435	-1.75375676108602	2.22710118257278e-08	Down	1.9292467378482e-09	GO:0031224//intrinsic component of membrane;GO:0043231//intracellular membrane-bounded organelle;GO:0019866//organelle inner membrane	GO:0005506//iron ion binding	GO:0006091//generation of precursor metabolites and energy;GO:0051234//establishment of localization	K00413//ubiquinol-cytochrome c reductase cytochrome c1 subunit	gi|460413922|ref|XP_004252324.1|//PREDICTED: cytochrome c1-2, heme protein, mitochondrial-like [Solanum lycopersicum]
Solyc11g006990.2.1	1761	210.759202624407	59.972024870103	-1.81323403733135	0.00049945942772392	Down	0.000102859450505988	NA	NA	NA	K16573//gamma-tubulin complex component 6	gi|460409078|ref|XP_004249967.1|//PREDICTED: protein trichome birefringence-like 36 [Solanum lycopersicum]
Solyc03g111950.3.1	2151	40.074323123385	7.26964397942615	-2.46272153566956	0.00556052015228874	Down	0.00150723507333546	NA	NA	NA	K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30];K07408//cytochrome P450, family 1, subfamily A, polypeptide 1 [EC:1.14.14.1]	gi|970019477|ref|XP_015070943.1|//PREDICTED: cytochrome P450 71A3-like [Solanum pennellii]
Solyc00g009141.1.1	687	112.479501625006	366.24794076308	1.70315854074025	0.000127231014340029	Up	2.28255133449591e-05	NA	NA	NA	K12947//signal peptidase complex subunit 2 [EC:3.4.-.-]	gi|460415849|ref|XP_004253266.1|//PREDICTED: probable signal peptidase complex subunit 2 isoform X2 [Solanum lycopersicum]
Solyc08g068600.3.1	1505	524.262712685599	6045.26707141572	3.52744423179678	3.92924712621379e-08	Up	3.56192374047709e-09	NA	GO:0048037//cofactor binding;GO:0016830//carbon-carbon lyase activity	GO:0043436//oxoacid metabolic process	K01590//histidine decarboxylase [EC:4.1.1.22]	gi|460399503|ref|XP_004245279.1|//PREDICTED: histidine decarboxylase-like [Solanum lycopersicum]
Solyc06g069740.1.1	558	7.95457577813588	348.059208985566	5.45140394331023	6.68140423595535e-33	Up	3.78549815068292e-35	NA	NA	NA	K02183//calmodulin	gi|460393146|ref|XP_004242172.1|//PREDICTED: probable calcium-binding protein CML30 [Solanum lycopersicum]
Solyc10g084960.2.1	1448	27.7527674858058	2687.72225986601	6.59760860922712	2.36761649224106e-26	Up	2.35632027519145e-28	NA	GO:0016765//transferase activity, transferring alkyl or aryl (other than methyl) groups	GO:0009755//hormone-mediated signaling pathway	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|460408228|ref|XP_004249548.1|//PREDICTED: probable glutathione S-transferase [Solanum lycopersicum]
Solyc06g062560.2.1	960	16.4553753081462	0.528132716421181	-4.96151460576057	0.00107867795437763	Down	0.00024156467682648	NA	GO:0042578//phosphoric ester hydrolase activity	GO:0006796//phosphate-containing compound metabolic process	K13248//pyridoxal phosphate phosphatase PHOSPHO2 [EC:3.1.3.74]	gi|350536679|ref|NP_001234003.1|//psi14B protein [Solanum lycopersicum]
Solyc05g054220.3.1	1510	528.852891752157	173.476409313662	-1.6081269840711	2.57280444847647e-05	Down	3.98638149959203e-06	NA	NA	GO:0043562//cellular response to nitrogen levels;GO:0009744//response to sucrose;GO:0009845//seed germination	K07199//5'-AMP-activated protein kinase, regulatory beta subunit	gi|723700850|ref|XP_010321291.1|//PREDICTED: SNF1-related kinase complex anchoring protein SIP1 isoform X1 [Solanum lycopersicum];gi|920500286|ref|NP_001234538.2|//SNF1-related kinase complex anchoring protein SIP1 [Solanum lycopersicum]
Solyc03g045123.1.1	857	84.1793227845863	361.65040470431	2.10305795762735	1.62597609698116e-07	Up	1.64367346615958e-08	NA	NA	NA	K13096//splicing factor 4;K03695//ATP-dependent Clp protease ATP-binding subunit ClpB	gi|460377831|ref|XP_004234690.1|//PREDICTED: G patch domain and ankyrin repeat-containing protein 1 homolog [Solanum lycopersicum];gi|970014765|ref|XP_015068381.1|//PREDICTED: G patch domain and ankyrin repeat-containing protein 1-like [Solanum pennellii]
Solyc08g081770.3.1	1495	1694.04528930888	427.72683720656	-1.98571080945887	7.47194683066266e-13	Down	3.2725277791966e-14	NA	NA	NA	NA	gi|460400063|ref|XP_004245555.1|//PREDICTED: GDT1-like protein 1, chloroplastic [Solanum lycopersicum]
Solyc03g034250.3.1	1515	308.687604591015	721.315144177959	1.22448216142137	3.30385108701968e-05	Up	5.24493133279291e-06	NA	NA	NA	NA	gi|460377584|ref|XP_004234571.1|//PREDICTED: uncharacterized protein LOC101257637 [Solanum lycopersicum]
Solyc02g076740.2.1	782	410.176614024045	110.922055865129	-1.88669897864926	0.0117699740311684	Down	0.00350800329332124	NA	NA	NA	K14709//solute carrier family 39 (zinc transporter), member 1/2/3;K02184//formin 2	gi|971577407|ref|XP_015158442.1|//PREDICTED: atrophin-1-like [Solanum tuberosum]
Solyc01g057080.1.1	342	0.754687820062836	38.2901044672774	5.66494779540521	3.8116896131892e-07	Up	4.12312630739341e-08	NA	NA	GO:0006351//transcription, DNA-templated	K09286//EREBP-like factor	gi|460366521|ref|XP_004229130.1|//PREDICTED: ethylene-responsive transcription factor ERF020-like [Solanum lycopersicum]
Solyc09g083190.3.1	988	2673.12149671204	288.329622604985	-3.21273444121855	1.42935379971917e-13	Down	5.62087467833506e-15	NA	NA	NA	NA	gi|460404325|ref|XP_004247633.1|//PREDICTED: uncharacterized protein LOC101266364 [Solanum lycopersicum]
Solyc02g032460.2.1	5456	304.367417145205	90.5328766136186	-1.74930022429279	0.0418073729703991	Down	0.0151439061326542	NA	NA	NA	K14317//nuclear pore complex protein Nup214	gi|723668515|ref|XP_010315773.1|//PREDICTED: uncharacterized protein LOC101268441 [Solanum lycopersicum]
Solyc03g097380.3.1	1487	7300.9929171336	536.218131094861	-3.76720077334932	0.000200597530986788	Down	3.7759711177996e-05	NA	NA	NA	K10752//histone-binding protein RBBP4;K07213//copper chaperone	gi|460379132|ref|XP_004235318.1|//PREDICTED: neurofilament medium polypeptide [Solanum lycopersicum]
Solyc10g076360.1.1	675	684.773902639786	2014.41993216119	1.55666483786146	0.0128115461386363	Up	0.00386141948997366	GO:0043231//intracellular membrane-bounded organelle	NA	GO:0006810//transport	K20359//PRA1 family protein 1	gi|460407242|ref|XP_004249063.1|//PREDICTED: PRA1 family protein B4-like [Solanum lycopersicum]
Solyc06g005230.2.1	2496	668.362075943028	218.103834261838	-1.61561474187336	0.00177724818214251	Down	0.000419072312518023	NA	GO:0000166//nucleotide binding;GO:0004672//protein kinase activity	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460389405|ref|XP_004240344.1|//PREDICTED: receptor-like protein kinase HERK 1 [Solanum lycopersicum]
Solyc12g039080.2.1	2970	3.993527294016	43.0816131959018	3.43133679375188	0.00359746456457546	Up	0.00092524621647423	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K16224//senescence-induced receptor-like serine/threonine-protein kinase	gi|970053435|ref|XP_015088357.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g67720 isoform X1 [Solanum pennellii];gi|460402398|ref|XP_004246699.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g67720 [Solanum lycopersicum]
Solyc02g082770.3.1	3110	1379.88504500763	439.386418231797	-1.65098590370076	0.00255326984798998	Down	0.000628514763535329	GO:0016021//integral component of membrane	GO:0052866//phosphatidylinositol phosphate phosphatase activity	GO:0016311//dephosphorylation	K08739//DNA mismatch repair protein MLH3	gi|697176649|ref|XP_009597276.1|//PREDICTED: phosphoinositide phosphatase SAC6-like [Nicotiana tomentosiformis];gi|971539159|ref|XP_015160667.1|//PREDICTED: DNA mismatch repair protein MLH3 isoform X7 [Solanum tuberosum];gi|565347642|ref|XP_006340833.1|//PREDICTED: phosphoinositide phosphatase SAC6 [Solanum tuberosum]
Solyc01g097030.3.1	3344	291.111545158805	728.371813500169	1.32310303777729	0.000790945307163511	Up	0.000171438309272246	NA	GO:0046914//transition metal ion binding	NA	K17604//zinc finger SWIM domain-containing protein 3	gi|460368441|ref|XP_004230075.1|//PREDICTED: uncharacterized protein LOC101255138 isoform X2 [Solanum lycopersicum];gi|565361966|ref|XP_006347723.1|//PREDICTED: uncharacterized protein LOC102603844 [Solanum tuberosum]
Solyc01g104444.1.1	1866	26.583136804786	81.1328821347364	1.60977538669861	0.00144132540449646	Up	0.000332125900201174	NA	NA	NA	NA	gi|971553943|ref|XP_015165059.1|//PREDICTED: uncharacterized protein LOC102592014 [Solanum tuberosum];gi|460371021|ref|XP_004231345.1|//PREDICTED: GATA transcription factor 26-like [Solanum lycopersicum];gi|969999318|ref|XP_015082120.1|//PREDICTED: uncharacterized protein LOC107025860 [Solanum pennellii];gi|723664185|ref|XP_010314957.1|//PREDICTED: uncharacterized protein LOC104645291 [Solanum lycopersicum]
Solyc05g016395.1.1	774	98.7423770635386	17.8488091131654	-2.46784155635709	0.000763018304026409	Down	0.000164844717837225	NA	NA	NA	K09651//rhomboid domain-containing protein 1 [EC:3.4.21.-]	gi|698524903|ref|XP_009759262.1|//PREDICTED: uncharacterized protein At3g17611 [Nicotiana sylvestris]
Solyc01g087840.3.1	2658	29.3806339675312	114.083139648186	1.95714815998846	0.00978486944135406	Up	0.0028536163153852	NA	GO:0004175//endopeptidase activity;GO:0005515//protein binding	GO:0044092//negative regulation of molecular function;GO:0019538//protein metabolic process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13199//plasminogen activator inhibitor 1 RNA-binding protein;K12663//Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase [EC:5.3.3.-];K01183//chitinase [EC:3.2.1.14]	gi|3970757|emb|CAA07062.1|//SBT4E protein [Solanum lycopersicum]
Solyc10g080010.2.1	1890	86.7301730964703	2922.76901598909	5.07465801955508	1.24748596932946e-20	Up	2.15757227437329e-22	NA	GO:0016740//transferase activity	NA	K18134//protein O-GlcNAc transferase [EC:2.4.1.255]	gi|460407630|ref|XP_004249254.1|//PREDICTED: EGF domain-specific O-linked N-acetylglucosamine transferase [Solanum lycopersicum]
Solyc10g074900.2.1	3251	129.497321145583	62.1943506269863	-1.05806680842468	0.0125993516120571	Down	0.00379182812418924	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460408543|ref|XP_004249703.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X1 [Solanum lycopersicum]
Solyc10g081840.2.1	824	34.3378213032516	83.8695963014568	1.28834940696122	0.0189596545313879	Up	0.00604803650960256	NA	NA	NA	K08064//nuclear transcription factor Y, alpha	gi|723738974|ref|XP_010312213.1|//PREDICTED: nuclear transcription factor Y subunit A-10-like isoform X1 [Solanum lycopersicum];gi|970057747|ref|XP_015055541.1|//PREDICTED: nuclear transcription factor Y subunit A-2-like [Solanum pennellii]
Solyc07g052980.3.1	1228	4509.64288658135	1235.17067322445	-1.86830278856885	0.034379878298286	Down	0.0120409026573243	GO:0030312//external encapsulating structure;GO:0005576//extracellular region	GO:0016758//transferase activity, transferring hexosyl groups;GO:0016798//hydrolase activity, acting on glycosyl bonds	GO:0044042//glucan metabolic process	K08235//xyloglucan:xyloglucosyl transferase [EC:2.4.1.207]	gi|882939031|ref|NP_001297408.1|//xyloglucan endotransglycosylase/hydrolase 16 precursor [Solanum lycopersicum]
Solyc06g076410.3.1	2025	1402.18391527577	489.123751077535	-1.51940416413028	4.71048513452803e-10	Down	3.1709915584306e-11	GO:0031224//intrinsic component of membrane;GO:0016021//integral component of membrane	GO:0016709//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen;GO:0005506//iron ion binding;GO:0046914//transition metal ion binding;GO:0016491//oxidoreductase activity	GO:0006631//fatty acid metabolic process;GO:0006633//fatty acid biosynthetic process;GO:0055114//oxidation-reduction process	K14424//4-alpha-methyl-delta7-sterol-4alpha-methyl oxidase [EC:1.14.13.72]	gi|350540120|ref|NP_001233880.1|//C-4 methyl sterol oxidase [Solanum lycopersicum]
Solyc08g077280.1.1	309	620.188988991117	245.690355766807	-1.33586668434209	0.000315003822633045	Down	6.18568951615927e-05	NA	NA	NA	NA	gi|970027306|ref|XP_015074959.1|//PREDICTED: uncharacterized protein LOC107018885 [Solanum pennellii]
Solyc11g018610.2.1	2527	435.146567857722	2094.40677984364	2.26696835016831	4.64961084817003e-08	Up	4.2634720018258e-09	NA	NA	NA	K13412//calcium-dependent protein kinase [EC:2.7.11.1]	gi|460409943|ref|XP_004250396.1|//PREDICTED: calcium-dependent protein kinase 11-like [Solanum lycopersicum]
Solyc05g005740.3.1	2435	703.381718660832	149.476576713636	-2.23438841002624	2.2852275931562e-07	Down	2.36972683918315e-08	GO:0044464//cell part	GO:0046873//metal ion transmembrane transporter activity	GO:0034220//ion transmembrane transport;GO:0030001//metal ion transport	K03549//KUP system potassium uptake protein	gi|460385982|ref|XP_004238679.1|//PREDICTED: potassium transporter 6-like [Solanum lycopersicum]
Solyc05g054250.1.1	1031	0.733801757757403	1092.14751892639	10.5394897567319	4.55495710276178e-23	Up	6.21408341885646e-25	NA	NA	NA	K00430//peroxidase [EC:1.11.1.7];K14685//solute carrier family 40 (iron-regulated transporter), member 1;K07213//copper chaperone	gi|970028832|ref|XP_015075740.1|//PREDICTED: uncharacterized protein LOC107019894 [Solanum pennellii];gi|723701547|ref|XP_010321387.1|//PREDICTED: uncharacterized protein LOC104647562 [Solanum lycopersicum]
Solyc11g062410.2.1	2576	3088.32565317578	1406.10114877398	-1.13512450846863	0.000180696856391246	Down	3.36365029378964e-05	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process;GO:0023052//signaling	K07198//5'-AMP-activated protein kinase, catalytic alpha subunit [EC:2.7.11.11]	gi|460410965|ref|XP_004250885.1|//PREDICTED: CBL-interacting serine/threonine-protein kinase 3 [Solanum lycopersicum];gi|970063240|ref|XP_015058542.1|//PREDICTED: CBL-interacting serine/threonine-protein kinase 3-like [Solanum pennellii]
Solyc04g064550.1.1	2095	948.024451470411	4156.78981703691	2.13247362696397	5.25222060560562e-09	Up	4.1543209054328e-10	GO:0005634//nucleus	GO:0043565//sequence-specific DNA binding;GO:0003700//transcription factor activity, sequence-specific DNA binding	GO:0006355//regulation of transcription, DNA-templated	K14777//ATP-dependent RNA helicase DDX47/RRP3 [EC:3.6.4.13];K14494//DELLA protein	gi|807201009|ref|NP_001293096.1|//GRAS6 protein [Solanum lycopersicum]
Solyc12g009060.2.1	1229	1514.90678116975	5671.99540025253	1.90462734151049	2.96981555403583e-06	Up	3.81909335821665e-07	NA	NA	GO:0006810//transport	K12191//charged multivesicular body protein 2A	gi|460412593|ref|XP_004251682.1|//PREDICTED: vacuolar protein sorting-associated protein 2 homolog 1 [Solanum lycopersicum]
Solyc11g006115.1.1	2837	133.476155300938	20.4640561847774	-2.70541800086296	4.8781714254014e-05	Down	7.95330319617777e-06	NA	GO:0004871//signal transducer activity	GO:0007165//signal transduction	K14509//ethylene receptor [EC:2.7.13.-]	gi|970063761|ref|XP_015058826.1|//PREDICTED: protein EIN4 [Solanum pennellii];gi|723684149|ref|XP_010318357.1|//PREDICTED: uncharacterized protein LOC104646486 [Solanum lycopersicum]
Solyc04g011430.3.1	1168	1764.07256619571	3561.74199758623	1.0136731072654	0.00184899755210313	Up	0.000438265075064255	GO:0044464//cell part	GO:0032559//adenyl ribonucleotide binding;GO:0019787//ubiquitin-like protein transferase activity	GO:0032446//protein modification by small protein conjugation;GO:0019941//modification-dependent protein catabolic process	K10575//ubiquitin-conjugating enzyme E2 G1 [EC:2.3.2.23]	gi|460382051|ref|XP_004236753.1|//PREDICTED: ubiquitin-conjugating enzyme E2 7 [Solanum lycopersicum]
BGI_novel_G000314	697	0.49730402518085	147.782540373835	8.21513201002763	1.22940334839321e-12	Up	5.54028868423806e-14	GO:0016020//membrane	NA	NA	NA	gi|703090537|ref|XP_010094108.1|//hypothetical protein L484_018125 [Morus notabilis]
Solyc08g066640.3.1	2075	226.112843654083	97.3939947529308	-1.21513821775812	0.00029590977634341	Down	5.77524820685141e-05	NA	NA	NA	NA	gi|460399271|ref|XP_004245165.1|//PREDICTED: probable transcriptional regulatory protein At2g25830 isoform X2 [Solanum lycopersicum];gi|723722681|ref|XP_010325089.1|//PREDICTED: probable transcriptional regulatory protein At2g25830 isoform X1 [Solanum lycopersicum]
Solyc10g084265.1.1	677	29.3205263628082	1.78586810632858	-4.03721356243034	0.00110479633361142	Down	0.000248196194374387	NA	NA	NA	NA	gi|723739327|ref|XP_010312263.1|//PREDICTED: uncharacterized protein LOC101250755 [Solanum lycopersicum]
Solyc05g005900.3.1	3259	753.169839851824	105.16527163348	-2.84031686237023	2.1005127920608e-08	Down	1.81332474519636e-09	NA	GO:0008080//N-acetyltransferase activity	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460386012|ref|XP_004238694.1|//PREDICTED: uncharacterized protein LOC101259841 [Solanum lycopersicum]
Solyc02g078410.1.1	489	169.391911000193	360.344089984753	1.08901020079001	0.0116804249568925	Up	0.00347695965803427	NA	NA	NA	NA	gi|460374119|ref|XP_004232859.1|//PREDICTED: uncharacterized protein LOC101245223 [Solanum lycopersicum]
Solyc07g065340.1.1	996	232.595955694869	763.498088506841	1.7147985331938	0.0293271265183515	Up	0.0100242191059074	GO:0044424//intracellular part	GO:0016412//serine O-acyltransferase activity	GO:0006563//L-serine metabolic process	K00640//serine O-acetyltransferase [EC:2.3.1.30]	gi|723719082|ref|XP_004244065.2|//PREDICTED: LOW QUALITY PROTEIN: serine acetyltransferase 1, chloroplastic-like [Solanum lycopersicum]
Solyc02g014090.3.1	1858	592.684311160561	1522.47323266946	1.36108108983907	1.20389126182845e-07	Up	1.19051868109098e-08	NA	NA	NA	NA	gi|460371304|ref|XP_004231480.1|//PREDICTED: uncharacterized protein LOC101259006 [Solanum lycopersicum]
Solyc04g071420.3.1	1836	782.102663445537	130.956983557406	-2.57826500019517	7.41271029568623e-06	Down	1.02951239606854e-06	NA	NA	NA	NA	gi|460384179|ref|XP_004237791.1|//PREDICTED: uncharacterized protein LOC101267802 [Solanum lycopersicum]
Solyc05g054770.3.1	2604	241.103505457878	1910.40962638228	2.98615747947227	1.20804968535918e-09	Up	8.66816626031172e-11	GO:0048046//apoplast	NA	NA	NA	gi|460388222|ref|XP_004239768.1|//PREDICTED: uncharacterized protein LOC101257172 isoform X1 [Solanum lycopersicum]
Solyc02g091270.3.1	1242	323.809931289205	1175.78755619945	1.86040827544647	1.43687994219759e-06	Up	1.73638168055934e-07	NA	NA	NA	K15186//ELL-associated factor	gi|460372373|ref|XP_004232005.1|//PREDICTED: ELL-associated factor 1 [Solanum lycopersicum]
Solyc08g068630.3.1	2393	1.63235918682366	111.644687073051	6.09581224278638	1.14072815311667e-07	Up	1.12337996888856e-08	NA	GO:0016831//carboxy-lyase activity;GO:0048037//cofactor binding;GO:0016830//carbon-carbon lyase activity;GO:0030170//pyridoxal phosphate binding	GO:0019752//carboxylic acid metabolic process;GO:0043436//oxoacid metabolic process	K01590//histidine decarboxylase [EC:4.1.1.22]	gi|460399505|ref|XP_004245280.1|//PREDICTED: histidine decarboxylase-like isoform X1 [Solanum lycopersicum]
Solyc04g071590.3.1	535	13.0106618372025	242.134704186573	4.21804361254399	1.1237728748259e-09	Up	8.0257523041838e-11	NA	NA	NA	NA	gi|823683750|ref|NP_001296300.1|//abscisic stress-ripening protein 3 [Solanum lycopersicum]
Solyc03g118020.3.1	3503	3633.26463891359	15464.4737384724	2.08961938144795	4.9154215973742e-13	Up	2.08137726800995e-14	GO:0031332//RNAi effector complex	GO:0016787//hydrolase activity;GO:0005488//binding	GO:0016458//gene silencing	K15979//staphylococcal nuclease domain-containing protein 1	gi|460380231|ref|XP_004235861.1|//PREDICTED: staphylococcal nuclease domain-containing protein 1 [Solanum lycopersicum]
Solyc02g089900.1.1	1938	781.702158743021	6496.16789095898	3.05489799187698	3.97432796115558e-06	Up	5.20715773947437e-07	NA	GO:0016301//kinase activity	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460372544|ref|XP_004232089.1|//PREDICTED: lysM domain receptor-like kinase 4 [Solanum lycopersicum]
Solyc12g019060.2.1	3392	1834.24759167507	606.324846164267	-1.59702554297592	0.00159435606669663	Down	0.000371370622513316	NA	NA	NA	K15502//serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A;K06694//26S proteasome non-ATPase regulatory subunit 10	gi|460413209|ref|XP_004251987.1|//PREDICTED: ankyrin repeat-containing protein At5g02620-like [Solanum lycopersicum]
Solyc04g071360.3.1	3040	1873.96275139755	372.151226286407	-2.33213138201356	5.98082330990523e-13	Down	2.57709547720681e-14	NA	NA	NA	NA	gi|460384175|ref|XP_004237789.1|//PREDICTED: trihelix transcription factor GT-2-like [Solanum lycopersicum]
Solyc01g095305.1.1	4250	64674.0266910202	420.527936616757	-7.26484098193044	1.23462186596225e-07	Down	1.22320893086613e-08	NA	NA	NA	K01555//fumarylacetoacetase [EC:3.7.1.2];K14306//nuclear pore complex protein Nup62	gi|460368215|ref|XP_004229963.1|//PREDICTED: BAG family molecular chaperone regulator 6 [Solanum lycopersicum]
Solyc12g011000.2.1	3282	1018.04456715586	3463.69887053674	1.76651278952388	1.12501102172865e-06	Up	1.3372819995127e-07	NA	GO:0016746//transferase activity, transferring acyl groups	GO:0005975//carbohydrate metabolic process;GO:0009060//aerobic respiration	K01647//citrate synthase [EC:2.3.3.1]	gi|460412855|ref|XP_004251813.1|//PREDICTED: citrate synthase, glyoxysomal [Solanum lycopersicum]
Solyc02g083560.3.1	2281	298.326299135424	636.48793553995	1.09324200355016	0.000190303817558016	Up	3.56305380793915e-05	NA	NA	NA	K18468//vacuolar protein sorting-associated protein 35	gi|698504015|ref|XP_009797562.1|//PREDICTED: vacuolar protein sorting-associated protein 35A-like [Nicotiana sylvestris];gi|697117291|ref|XP_009612578.1|//PREDICTED: vacuolar protein sorting-associated protein 35A isoform X2 [Nicotiana tomentosiformis];gi|460373405|ref|XP_004232510.1|//PREDICTED: vacuolar protein sorting-associated protein 35A [Solanum lycopersicum]
Solyc02g080010.2.1	2815	562.277516699134	3604.21310651801	2.68033005063117	8.53266318099609e-06	Up	1.20191345463636e-06	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|723674032|ref|XP_010316619.1|//PREDICTED: putative receptor-like protein kinase At4g00960 isoform X1 [Solanum lycopersicum]
Solyc01g099940.3.1	1057	90.5294924446162	14.662581156179	-2.62624877244722	5.14324961549055e-05	Down	8.44107949045955e-06	NA	GO:0016787//hydrolase activity	NA	K01051//pectinesterase [EC:3.1.1.11]	gi|969997861|ref|XP_015069733.1|//PREDICTED: pectinesterase [Solanum pennellii];gi|723666798|ref|XP_010315470.1|//PREDICTED: pectinesterase [Solanum lycopersicum]
Solyc01g106290.3.1	703	518.250873195756	2435.25445948056	2.23234998000403	0.000372746745804323	Up	7.43464975696636e-05	NA	NA	NA	NA	NA
Solyc06g009020.2.1	1403	5238.6666148619	45740.9301475467	3.12621414551095	5.57356102946737e-16	Up	1.61007521911332e-17	NA	GO:0016765//transferase activity, transferring alkyl or aryl (other than methyl) groups	GO:0009755//hormone-mediated signaling pathway	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|460389800|ref|XP_004240536.1|//PREDICTED: glutathione S-transferase [Solanum lycopersicum]
Solyc12g009510.1.1	4077	235.230970116667	4782.89494932375	4.34573418395677	3.20109537066734e-31	Up	2.12388167578197e-33	NA	NA	NA	K10406//kinesin family member C2/C3	gi|970064679|ref|XP_015059311.1|//PREDICTED: receptor-like protein 12 [Solanum pennellii];gi|723747890|ref|XP_010313777.1|//PREDICTED: receptor-like protein 12 [Solanum lycopersicum];gi|723747887|ref|XP_010313776.1|//PREDICTED: receptor-like protein 12 [Solanum lycopersicum]
Solyc09g008270.3.1	1103	1539.89683699952	98.9695810731125	-3.9597047209411	3.51598548437684e-15	Down	1.10480682992757e-16	NA	NA	NA	NA	gi|460402239|ref|XP_004246621.1|//PREDICTED: uncharacterized protein LOC101260668 [Solanum lycopersicum]
Solyc05g052720.1.1	444	126.812584865645	275.184966958355	1.11770373393997	0.00183508343037512	Up	0.000434625022983582	NA	NA	NA	K18441//cytohesin	gi|460388552|ref|XP_004239931.1|//PREDICTED: pleckstrin homology domain-containing protein 1 [Solanum lycopersicum]
Solyc11g008380.2.1	2359	122.081754754481	263.818502816823	1.11169814688362	0.0489066490492537	Up	0.0182211771608581	NA	NA	NA	K00111//glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]	gi|460409256|ref|XP_004250055.1|//PREDICTED: glycerol-3-phosphate dehydrogenase SDP6, mitochondrial isoform X2 [Solanum lycopersicum]
Solyc04g053145.1.1	1295	76.18583140446	240.040305916538	1.65568204981165	0.000125605273602475	Up	2.24925597416218e-05	NA	NA	NA	NA	gi|970023133|ref|XP_015072902.1|//PREDICTED: uncharacterized protein LOC107017144 [Solanum pennellii]
Solyc09g090300.3.1	521	17.7505393398888	2.84903392495461	-2.63931815492912	0.0170437670463567	Down	0.00534348906466774	NA	NA	NA	K16904//dCTP diphosphatase [EC:3.6.1.12]	gi|460404548|ref|XP_004247743.1|//PREDICTED: dCTP pyrophosphatase 1-like isoform X1 [Solanum lycopersicum]
Solyc10g044510.2.1	2638	34110.5826877384	1256.5386068426	-4.76269249626793	6.74947717251824e-24	Down	8.47835771260865e-26	NA	NA	NA	K08472//mlo protein	gi|460406802|ref|XP_004248847.1|//PREDICTED: MLO-like protein 4 [Solanum lycopersicum]
Solyc02g072070.3.1	2385	4.89325282216001	86.536865742962	4.14444913883498	1.24241253768206e-09	Up	8.93325549869054e-11	NA	GO:0016301//kinase activity	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|971569742|ref|XP_006358140.2|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Solanum tuberosum]
Solyc06g074370.2.1	1149	214.855130944297	53.6817348726694	-2.00086102839312	2.13685830185487e-05	Down	3.25929035753323e-06	GO:0031228//intrinsic component of Golgi membrane	GO:0016757//transferase activity, transferring glycosyl groups	GO:0006464//cellular protein modification process	K03368//beta-galactoside alpha-2,3-sialyltransferase (sialyltransferase 4B) [EC:2.4.99.4];K00780//beta-galactoside alpha-2,3-sialyltransferase (sialyltransferase 4A) [EC:2.4.99.4]	gi|460391415|ref|XP_004241316.1|//PREDICTED: CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1 [Solanum lycopersicum]
Solyc12g095750.2.1	2195	1030.50966952301	18.7021082619879	-5.78401331963965	4.67919948996531e-45	Down	1.01160567473531e-47	GO:0016021//integral component of membrane	NA	GO:0055085//transmembrane transport	K07088//uncharacterized protein	gi|460415536|ref|XP_004253114.1|//PREDICTED: uncharacterized transporter C5D6.04-like [Solanum lycopersicum]
Solyc02g067780.3.1	2412	23.70904406872	131.820441566404	2.47506470758191	5.10741439711006e-05	Up	8.37655559388857e-06	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|970007067|ref|XP_015064401.1|//PREDICTED: putative cysteine-rich receptor-like protein kinase 43 isoform X2 [Solanum pennellii]
Solyc09g008670.3.1	2078	11544.392567545	125.040076384437	-6.52865788969143	7.59174226917621e-14	Down	2.89203839238783e-15	GO:0009536//plastid	GO:0048037//cofactor binding;GO:0016841//ammonia-lyase activity	GO:0008652//cellular amino acid biosynthetic process;GO:0050896//response to stimulus;GO:0006549//isoleucine metabolic process	K01754//threonine dehydratase [EC:4.3.1.19]	gi|822476281|ref|NP_001296095.1|//threonine dehydratase biosynthetic, chloroplastic [Solanum lycopersicum]
Solyc08g068150.3.1	1465	7073.75326835385	2365.70447627969	-1.58020603537096	0.00833077035207127	Down	0.00237551786168724	GO:0005768//endosome;GO:0005802//trans-Golgi network	NA	NA	K06699//proteasome activator subunit 4;K12472//epidermal growth factor receptor substrate 15	gi|350540638|ref|NP_001234521.1|//BURP domain-containing protein precursor [Solanum lycopersicum]
Solyc01g086690.2.1	2314	50.6882847349735	16.5371702308569	-1.61593995682419	0.0139373273898873	Down	0.00425216284054822	NA	NA	NA	K06670//cohesin complex subunit SCC1	gi|460367467|ref|XP_004229595.1|//PREDICTED: sister chromatid cohesion 1 protein 3 [Solanum lycopersicum]
Solyc11g007540.2.1	1877	755.732402541769	54.5198384891449	-3.79302228726417	1.13070125087298e-09	Down	8.07944795707285e-11	NA	GO:0005506//iron ion binding;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K00517;K15399//cytochrome P450, family 77, subfamily A, polypeptide 6 [EC:1.14.-.-]	gi|723741038|ref|XP_010312564.1|//PREDICTED: cytochrome P450 77A1 [Solanum lycopersicum]
Solyc08g076490.2.1	1468	94.3544969907257	248.09771974174	1.39474529125731	0.0203224109095928	Up	0.00655774233056302	NA	NA	NA	K13448//calcium-binding protein CML	gi|723726410|ref|XP_010325688.1|//PREDICTED: mitogen-activated protein kinase kinase kinase NPK1-like [Solanum lycopersicum]
Solyc04g081660.2.1	354	11.1518097235832	41.8275263816634	1.90717483092596	0.0218893943766133	Up	0.00715395146466922	NA	NA	NA	K05868//cyclin B	gi|565350348|ref|XP_006342132.1|//PREDICTED: G2/mitotic-specific cyclin-2-like [Solanum tuberosum]
Solyc06g084460.3.1	2283	688.370920054865	238.951467960467	-1.52646852202951	6.79382628600551e-05	Down	1.14488178913937e-05	NA	GO:0016829//lyase activity;GO:0005488//binding;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K13832//3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25]	gi|723711105|ref|XP_004242317.2|//PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic [Solanum lycopersicum]
Solyc12g057160.1.1	399	176.569304848313	2248.79743531253	3.67084724449857	5.56154211462777e-22	Up	8.45798860432432e-24	NA	NA	NA	NA	NA
Solyc01g109850.3.1	1867	5168.84939185459	2064.17097579313	-1.32428069164941	1.05977552723279e-05	Down	1.5121592061455e-06	NA	GO:0016831//carboxy-lyase activity	GO:0009085//lysine biosynthetic process	K01586//diaminopimelate decarboxylase [EC:4.1.1.20]	gi|460370108|ref|XP_004230896.1|//PREDICTED: diaminopimelate decarboxylase 1, chloroplastic-like [Solanum lycopersicum]
Solyc02g062780.3.1	2008	802.700124959328	2169.72976026763	1.43458233895722	0.00596359081433562	Up	0.00163449691582712	NA	GO:0005524//ATP binding;GO:0003676//nucleic acid binding	NA	K19001//ATP-dependent DNA helicase	gi|460375444|ref|XP_004233516.1|//PREDICTED: F-box protein At5g07610 [Solanum lycopersicum];gi|460376365|ref|XP_004233969.1|//PREDICTED: ATP-dependent DNA helicase DDM1-like [Solanum lycopersicum]
Solyc01g105180.3.1	1814	113.943808567865	348.486531717387	1.61278036583708	2.90226038638719e-05	Up	4.53741136319225e-06	NA	NA	NA	NA	gi|723664452|ref|XP_010315105.1|//PREDICTED: protein DA1-related 6-like isoform X4 [Solanum lycopersicum];gi|460369432|ref|XP_004230566.1|//PREDICTED: protein DA1-like isoform X2 [Solanum lycopersicum]
Solyc01g079220.3.1	951	1932.61688841793	572.968762940594	-1.75402728026285	1.52659775932095e-10	Down	9.47437479226697e-12	NA	GO:0005488//binding	NA	K09571//FK506-binding protein 4/5 [EC:5.2.1.8]	gi|460367020|ref|XP_004229373.1|//PREDICTED: nifU-like protein 1, chloroplastic [Solanum lycopersicum]
Solyc03g096730.3.1	1646	1854.64581359682	857.528443192525	-1.11288726836854	0.00351737863433297	Down	0.000901633102292673	NA	GO:0008905//mannose-phosphate guanylyltransferase activity	GO:0008152//metabolic process	K00966//mannose-1-phosphate guanylyltransferase [EC:2.7.7.13]	gi|350537127|ref|NP_001234025.1|//GDP-mannose pyrophosphorylase [Solanum lycopersicum]
Solyc08g078010.3.1	1378	8240.5756580611	2359.01443968698	-1.80456087316692	1.2991097259649e-06	Down	1.56021005556095e-07	NA	NA	NA	K02884//large subunit ribosomal protein L19	gi|460400589|ref|XP_004245816.1|//PREDICTED: 50S ribosomal protein L19-2, chloroplastic-like [Solanum lycopersicum]
Solyc12g008350.2.1	687	218.287389188183	1137.30115768258	2.38131363984508	2.39657233089553e-14	Up	8.49537903191313e-16	GO:0043231//intracellular membrane-bounded organelle	GO:0001071//nucleic acid binding transcription factor activity;GO:0003676//nucleic acid binding	GO:0006351//transcription, DNA-templated	K09286//EREBP-like factor	gi|350536451|ref|NP_001234759.1|//dehydration responsive element binding protein [Solanum lycopersicum]
Solyc01g020200.1.1	468	187.276521546147	40.5859890124145	-2.20611636823916	0.0367743384438642	Down	0.0130330404772723	GO:0044464//cell part	NA	NA	NA	gi|544163672|ref|YP_008563147.1|//hypothetical chloroplast RF1 (chloroplast) [Solanum lycopersicum]
Solyc03g097820.2.1	1923	191.702798985436	32.8086812488741	-2.54672189070959	5.79660049196617e-05	Down	9.63219211017787e-06	GO:0043231//intracellular membrane-bounded organelle	NA	NA	K11253//histone H3;K07953//GTP-binding protein SAR1 [EC:3.6.5.-];K12126//phytochrome-interacting factor 3	gi|930425303|ref|NP_001266190.2|//basic helix-loop-helix [Solanum lycopersicum]
Solyc08g067390.3.1	1183	57.0760505713101	1054.2323166348	4.20716350259099	2.57808400312845e-17	Up	6.46731226370003e-19	NA	NA	NA	K20628;K14771//U3 small nucleolar RNA-associated protein 19	gi|460399368|ref|XP_004245213.1|//PREDICTED: EG45-like domain containing protein [Solanum lycopersicum]
Solyc06g071920.3.1	2098	15899.1139182345	4076.13895029295	-1.96367122710592	2.78420994987758e-09	Down	2.11354017049612e-10	GO:0044424//intracellular part	GO:0000166//nucleotide binding	GO:0006007//glucose catabolic process	K00134//glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12]	gi|460391793|ref|XP_004241503.1|//PREDICTED: glyceraldehyde-3-phosphate dehydrogenase, cytosolic [Solanum lycopersicum]
Solyc09g072990.3.1	2049	6718.02979741218	307.225778551219	-4.45066701536812	1.47832360644059e-35	Down	6.88796968857441e-38	NA	NA	NA	K06634//cyclin H	gi|460404038|ref|XP_004247492.1|//PREDICTED: uncharacterized protein LOC101268799 [Solanum lycopersicum]
Solyc01g080080.3.1	1806	610.671833658962	276.747090470786	-1.14182915494697	0.00298092282317241	Down	0.000747008503809011	NA	NA	NA	K10604//E3 ubiquitin-protein ligase MGRN1 [EC:2.3.2.27]	gi|525314148|ref|NP_001265959.1|//Hop-interacting protein THI037 [Solanum lycopersicum]
Solyc11g039960.2.1	1698	263.500085468225	1121.31652046685	2.08931823853788	9.11210597662968e-08	Up	8.83087652424227e-09	NA	NA	NA	NA	gi|460410557|ref|XP_004250693.1|//PREDICTED: uncharacterized protein LOC101258614 isoform X1 [Solanum lycopersicum];gi|723743750|ref|XP_010313038.1|//PREDICTED: uncharacterized protein LOC101258614 isoform X2 [Solanum lycopersicum]
Solyc04g057960.3.1	4467	572.963000209529	222.540305435259	-1.36437532441686	1.88864576283296e-05	Down	2.84620352584377e-06	NA	NA	NA	K13338//peroxin-1	gi|460383292|ref|XP_004237362.1|//PREDICTED: peroxisome biogenesis protein 1 isoform X1 [Solanum lycopersicum];gi|723691823|ref|XP_010319714.1|//PREDICTED: peroxisome biogenesis protein 1 isoform X2 [Solanum lycopersicum]
Solyc01g006110.3.1	1631	1259.01390312265	2769.14019070025	1.13714387890787	4.19677253692922e-05	Up	6.76414359985163e-06	NA	NA	NA	K17606//immunoglobulin-binding protein 1	gi|723655887|ref|XP_010316147.1|//PREDICTED: PP2A regulatory subunit TAP46 [Solanum lycopersicum]
Solyc11g067260.2.1	2012	785.097562995644	371.671701210958	-1.07884310015245	0.00164416753994006	Down	0.000384076262591485	NA	NA	NA	NA	gi|460411296|ref|XP_004251049.1|//PREDICTED: uncharacterized protein LOC101256939 [Solanum lycopersicum]
Solyc01g087332.1.1	2434	428.613335034516	172.828411047108	-1.31033633605933	0.0432116072118038	Down	0.0157525539932698	NA	NA	NA	K18046//tyrosine-protein phosphatase OCA6 [EC:3.1.3.48];K05539//tRNA-dihydrouridine synthase A [EC:1.-.-.-]	gi|970003498|ref|XP_015062525.1|//PREDICTED: histone-lysine N-methyltransferase 2C-like isoform X2 [Solanum pennellii];gi|971547121|ref|XP_015163348.1|//PREDICTED: uncharacterized protein LOC102586916 isoform X1 [Solanum tuberosum];gi|970003496|ref|XP_015062524.1|//PREDICTED: uncharacterized protein LOC107008120 isoform X1 [Solanum pennellii];gi|971547134|ref|XP_015163353.1|//PREDICTED: uncharacterized protein LOC102585239 isoform X1 [Solanum tuberosum]
Solyc12g013850.2.1	2500	451.573939791553	10.4864565757792	-5.42836305921283	2.32095887946134e-09	Down	1.74196230958772e-10	NA	NA	NA	K20891	gi|723748529|ref|XP_010313899.1|//PREDICTED: xylosyltransferase 1-like [Solanum lycopersicum]
Solyc11g072130.2.1	1667	26.2354921045656	0.433627925870419	-5.91891837092315	1.43721893881064e-05	Down	2.10964968728057e-06	NA	NA	NA	K06892//feruloyl-CoA ortho-hydroxylase [EC:1.14.11.-]	gi|460412099|ref|XP_004251440.1|//PREDICTED: feruloyl CoA ortho-hydroxylase 2-like [Solanum lycopersicum]
Solyc10g037980.2.1	719	907.617869946368	434.26695602937	-1.06350283397103	0.00250318456136193	Down	0.000614879463969551	NA	NA	NA	NA	gi|723735405|ref|XP_010327286.1|//PREDICTED: thioredoxin-like protein Clot [Solanum lycopersicum]
Solyc12g087950.1.1	801	844.017418389074	11865.4951542769	3.8133557232742	2.36543049764537e-21	Up	3.80013621770224e-23	NA	NA	NA	NA	gi|460414729|ref|XP_004252716.1|//PREDICTED: putative DNA-binding protein ESCAROLA [Solanum lycopersicum]
Solyc10g080340.2.1	1715	89.2665557797129	21.1046926827261	-2.08055594115671	1.38090471618271e-05	Down	2.01617853484705e-06	NA	GO:0022857//transmembrane transporter activity	GO:0006810//transport	K03327//multidrug resistance protein, MATE family	gi|460407671|ref|XP_004249274.1|//PREDICTED: protein TRANSPARENT TESTA 12-like [Solanum lycopersicum]
Solyc04g074780.3.1	1133	4.62697916346131	117.953849168108	4.6720080862729	1.92274251920901e-11	Up	1.03418721306792e-12	NA	NA	NA	NA	gi|460384511|ref|XP_004237954.1|//PREDICTED: uncharacterized protein LOC101267599 [Solanum lycopersicum]
Solyc02g068877.1.1	1017	30.5176993851003	6.05539522076309	-2.33335317763876	0.0129848054186103	Down	0.0039233201402734	NA	NA	NA	NA	gi|460374879|ref|XP_004233236.1|//PREDICTED: protein EXORDIUM-like 7 [Solanum lycopersicum]
Solyc01g094950.3.1	1597	5455.18342124829	17417.2280724359	1.67481542866122	1.50522848874915e-05	Up	2.22070014852734e-06	GO:0016021//integral component of membrane	NA	NA	NA	gi|460368130|ref|XP_004229922.1|//PREDICTED: protein BPS1, chloroplastic [Solanum lycopersicum]
Solyc04g076110.3.1	1286	720.77238336732	2656.20479380264	1.8817507430005	3.92718449452782e-08	Up	3.55859009475068e-09	NA	NA	NA	K03143//transcription initiation factor TFIIH subunit 3;K08678//UDP-glucuronate decarboxylase [EC:4.1.1.35]	gi|460384565|ref|XP_004237981.1|//PREDICTED: uncharacterized protein LOC101250398 [Solanum lycopersicum]
Solyc09g075210.3.1	1432	9184.53440780068	2382.95548349215	-1.94645458807567	1.33273862750475e-05	Down	1.93819063862515e-06	NA	NA	GO:0050896//response to stimulus	NA	gi|460403872|ref|XP_004247410.1|//PREDICTED: indole-3-acetic acid-induced protein ARG2 [Solanum lycopersicum]
Solyc10g008980.3.1	1699	24636.6498074468	7244.35314691425	-1.76587730433864	2.61524585982753e-08	Down	2.28595181947799e-09	GO:0031224//intrinsic component of membrane;GO:0016021//integral component of membrane;GO:0009941//chloroplast envelope;GO:0031969//chloroplast membrane	GO:0005215//transporter activity	GO:0006810//transport;GO:0051234//establishment of localization	K15283//solute carrier family 35, member E1	gi|808175907|ref|NP_001294940.1|//triose phosphate/phosphate translocator [Solanum lycopersicum]
Solyc12g005640.2.1	755	39.2938143486296	2594.67519387097	6.04510791988612	1.83592919799221e-41	Up	5.13249924889726e-44	NA	NA	NA	K09422//myb proto-oncogene protein, plant	gi|460413310|ref|XP_004252033.1|//PREDICTED: myb-related protein Myb4-like [Solanum lycopersicum]
Solyc10g009040.3.1	958	303.82981617386	83.3723918060356	-1.8656218255533	3.2683107901548e-05	Down	5.18120090596704e-06	NA	NA	NA	NA	gi|460405296|ref|XP_004248112.1|//PREDICTED: uncharacterized protein LOC101247862 [Solanum lycopersicum]
Solyc08g066020.2.1	2531	44.0675298590582	1804.96849365177	5.3561138136459	4.97677912085461e-25	Up	5.49100424844552e-27	NA	GO:0003824//catalytic activity	NA	K00654//serine palmitoyltransferase [EC:2.3.1.50]	gi|460399207|ref|XP_004245133.1|//PREDICTED: long chain base biosynthesis protein 1-like [Solanum lycopersicum];gi|698513658|ref|XP_009801763.1|//PREDICTED: long chain base biosynthesis protein 1-like [Nicotiana sylvestris]
Solyc08g078340.3.1	2565	2206.67110183356	6732.65644605516	1.60930423290177	5.60803057081849e-07	Up	6.23764843570984e-08	GO:0043231//intracellular membrane-bounded organelle	GO:0046914//transition metal ion binding;GO:0003676//nucleic acid binding	NA	K08869//aarF domain-containing kinase;K17613//calcineurin-binding protein cabin-1	gi|460400530|ref|XP_004245787.1|//PREDICTED: transcription factor MYB1R1 [Solanum lycopersicum]
Solyc02g020880.2.1	4975	271.235294605158	24.2918740616256	-3.48099922203065	9.70651401857872e-09	Down	7.98504414753364e-10	NA	NA	NA	K01738//cysteine synthase A [EC:2.5.1.47];K13126//polyadenylate-binding protein;K02350//DNA polymerase zeta [EC:2.7.7.7];K15095//(+)-neomenthol dehydrogenase [EC:1.1.1.208]	gi|113205226|gb|ABI34306.1|//Polyprotein, putative [Solanum demissum]
Solyc03g034090.3.1	1020	64.9300197422425	166.110935781647	1.35518950197486	0.0044979471865211	Up	0.00118786177935373	NA	NA	NA	NA	gi|460377564|ref|XP_004234561.1|//PREDICTED: uncharacterized protein LOC101254457 isoform X1 [Solanum lycopersicum]
Solyc01g110280.3.1	2295	1646.31923003748	266.317825905294	-2.62802320585046	4.52192454493905e-09	Down	3.55568166842122e-10	GO:0016021//integral component of membrane	GO:0015238//drug transmembrane transporter activity;GO:0015297//antiporter activity;GO:0022857//transmembrane transporter activity	GO:0006810//transport;GO:0006855//drug transmembrane transport	K03327//multidrug resistance protein, MATE family;K20456//oxysterol-binding protein 1	gi|460370078|ref|XP_004230881.1|//PREDICTED: MATE efflux family protein 4, chloroplastic [Solanum lycopersicum]
Solyc05g052620.3.1	2220	1385.52777862116	380.84069103693	-1.86317609870935	6.14552394045459e-08	Down	5.78175876908729e-09	NA	NA	NA	K13463//coronatine-insensitive protein 1	gi|350535701|ref|NP_001234464.1|//coronatine-insensitive 1 [Solanum lycopersicum]