GeneID	Length	RT-Expression	ST-Expression	log2FoldChange(ST/RT)	Padj	Up/Down-Regulation	Pvalue	Cellular Component	Molecular Function	Biological Process	Kegg Orthology	Nr Description
Solyc03g006300.2.1	3451	65.9973736700756	23.6450364869512	-1.48087124630341	0.0168677219586192	Down	0.00332087242323003	NA	NA	NA	K00924	gi|460376632|ref|XP_004234101.1|//PREDICTED: receptor-like protein kinase HSL1 isoform X1 [Solanum lycopersicum]
Solyc02g084280.3.1	3712	364.799020618427	932.398090797573	1.35384419408799	3.42282147042172e-12	Up	4.68738530938114e-14	NA	NA	NA	K14297//nuclear pore complex protein Nup98-Nup96	gi|723672546|ref|XP_010316411.1|//PREDICTED: uncharacterized protein LOC101254256 isoform X2 [Solanum lycopersicum];gi|723672543|ref|XP_010316410.1|//PREDICTED: uncharacterized protein LOC101254256 isoform X1 [Solanum lycopersicum];gi|971537256|ref|XP_015168643.1|//PREDICTED: nuclear pore complex protein NUP98A-like isoform X2 [Solanum tuberosum]
Solyc06g054220.2.1	1570	455.587865334251	216.104602014102	-1.07599952595258	0.000153885663996273	Down	1.2626961368543e-05	NA	NA	NA	K15559//regulator of Ty1 transposition protein 103	gi|723693736|ref|XP_010320067.1|//PREDICTED: uncharacterized protein LOC101249172 isoform X2 [Solanum lycopersicum]
Solyc03g121990.3.1	2713	1242.95559207453	2544.73413677479	1.03374018424659	7.84194790903954e-06	Up	4.22485681179256e-07	NA	GO:0003677//DNA binding	NA	K09422//myb proto-oncogene protein, plant;K11111//telomeric repeat-binding factor 2;K03255//protein TIF31	gi|970017370|ref|XP_015069816.1|//PREDICTED: uncharacterized protein LOC107014425 isoform X2 [Solanum pennellii];gi|723684843|ref|XP_010318487.1|//PREDICTED: uncharacterized protein LOC101258446 [Solanum lycopersicum]
Solyc06g062670.3.1	2221	2731.85989458943	922.549814901228	-1.56618477630657	7.34805224901374e-18	Down	4.42320677141535e-20	GO:0044464//cell part	GO:0046914//transition metal ion binding	NA	K14794//ribosomal RNA-processing protein 12;K12309//beta-galactosidase [EC:3.2.1.23]	gi|970036196|ref|XP_015079426.1|//PREDICTED: protein indeterminate-domain 7 isoform X2 [Solanum pennellii];gi|970036194|ref|XP_015079425.1|//PREDICTED: protein indeterminate-domain 7 isoform X1 [Solanum pennellii]
Solyc06g072550.3.1	925	177.49619784242	83.3834259680998	-1.08995556651263	0.0466816482012137	Down	0.0118091573553409	NA	NA	NA	NA	gi|460391702|ref|XP_004241458.1|//PREDICTED: CASP-like protein 1F1 [Solanum lycopersicum]
Solyc01g095580.3.1	2663	1945.22496407162	930.512536900237	-1.0638395185341	6.66025745801037e-07	Down	2.60847555071061e-08	NA	NA	NA	K14506//jasmonic acid-amino synthetase	gi|698515789|ref|XP_009802774.1|//PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.5 [Nicotiana sylvestris];gi|723661458|ref|XP_010326874.1|//PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.5 [Solanum lycopersicum]
Solyc02g084420.3.1	1391	112.831475529016	27.0764861019808	-2.05905715094681	0.000369144413486594	Down	3.50395543727117e-05	GO:0005634//nucleus;GO:0044464//cell part	GO:0000989//transcription factor activity, transcription factor binding;GO:0046914//transition metal ion binding;GO:0008270//zinc ion binding	GO:0006355//regulation of transcription, DNA-templated;GO:0009640//photomorphogenesis	K12135//zinc finger protein CONSTANS	gi|970010568|ref|XP_015066178.1|//PREDICTED: B-box zinc finger protein 19-like [Solanum pennellii]
Solyc04g056510.1.1	207	15.2752559992188	50.7092972569246	1.73105372280085	0.00301713700729881	Up	0.000419765713054589	NA	NA	NA	NA	gi|971555804|ref|XP_015165531.1|//PREDICTED: bZIP transcription factor 17-like [Solanum tuberosum]
Solyc12g088200.2.1	1984	963.57570556096	3366.90036236422	1.80495110294463	3.41083663227047e-13	Up	3.90103211516261e-15	NA	NA	NA	K00913//inositol-1,3,4-trisphosphate 5/6-kinase / inositol-tetrakisphosphate 1-kinase [EC:2.7.1.159 2.7.1.134]	gi|460414758|ref|XP_004252730.1|//PREDICTED: inositol-tetrakisphosphate 1-kinase 2 [Solanum lycopersicum]
Solyc06g054640.2.1	1988	7.68944276684705	36.6256984583231	2.25190531336406	0.000813410760277324	Up	8.78287765987931e-05	NA	NA	NA	NA	gi|970035095|ref|XP_015078878.1|//PREDICTED: uncharacterized protein LOC107022804 isoform X2 [Solanum pennellii]
Solyc11g005280.1.1	627	104.182436372017	20.2619158557365	-2.36226958189062	8.68656602180504e-07	Down	3.50338554378292e-08	NA	NA	NA	K19040//E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:2.3.2.27]	gi|460408870|ref|XP_004249864.1|//PREDICTED: RING-H2 finger protein ATL78-like [Solanum lycopersicum]
Solyc11g031960.2.1	1302	78.8977841699866	24.3964397488442	-1.69331415697075	2.57425524157334e-05	Down	1.62803726903115e-06	NA	GO:0016787//hydrolase activity	GO:0044238//primary metabolic process	K21026;K17604//zinc finger SWIM domain-containing protein 3;K01188//beta-glucosidase [EC:3.2.1.21];K00679//phospholipid:diacylglycerol acyltransferase [EC:2.3.1.158];K10960//geranylgeranyl reductase [EC:1.3.1.83]	gi|460410468|ref|XP_004250650.1|//PREDICTED: GDSL esterase/lipase At1g33811 [Solanum lycopersicum]
Solyc03g115590.3.1	3035	599.667999394117	262.477142301177	-1.19197219523747	2.86381833903356e-05	Down	1.84672108092683e-06	NA	NA	NA	K10849//DNA excision repair protein ERCC-1	gi|460380466|ref|XP_004235977.1|//PREDICTED: uncharacterized protein LOC101257550 isoform X2 [Solanum lycopersicum];gi|460380464|ref|XP_004235976.1|//PREDICTED: uncharacterized protein LOC101257550 isoform X1 [Solanum lycopersicum]
Solyc11g006240.1.1	369	10.1842158931348	30.0030082463634	1.55877225146207	0.0315721916005355	Up	0.00717323043926387	NA	NA	NA	NA	NA
Solyc05g013480.3.1	1243	820.075503444774	1787.21869544917	1.123887534229	1.96844712712467e-10	Up	3.78433589902448e-12	NA	NA	NA	K14570//RNA exonuclease 1 [EC:3.1.-.-]	gi|460386890|ref|XP_004239127.1|//PREDICTED: uncharacterized protein LOC101267023 [Solanum lycopersicum]
Solyc08g082870.3.1	2145	294.240929361607	133.154745049437	-1.14389410085978	0.00055473098462116	Down	5.63192474134805e-05	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K11153//retinol dehydrogenase 12 [EC:1.1.1.300]	gi|460399906|ref|XP_004245477.1|//PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Solanum lycopersicum]
Solyc01g079410.3.1	1333	164.883429774508	66.2737175239542	-1.31493766750826	0.0153844965528464	Down	0.00296171816632487	NA	NA	NA	NA	gi|460367048|ref|XP_004229387.1|//PREDICTED: uncharacterized protein LOC101266754 [Solanum lycopersicum]
Solyc01g081160.3.1	2476	9.66459702857942	65.2269637064418	2.75468698837716	6.7976219527411e-06	Up	3.56760068625803e-07	NA	NA	NA	K01188//beta-glucosidase [EC:3.2.1.21]	gi|698487774|ref|XP_009790515.1|//PREDICTED: beta-glucosidase 11-like isoform X1 [Nicotiana sylvestris];gi|697177520|ref|XP_009597720.1|//PREDICTED: beta-glucosidase 11-like isoform X2 [Nicotiana tomentosiformis]
Solyc01g099180.3.1	2788	413.57909941017	159.637063582646	-1.37336763281784	0.00905786174929496	Down	0.00157036556205366	GO:0044424//intracellular part	GO:0016702//oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen;GO:0046914//transition metal ion binding	GO:0006633//fatty acid biosynthetic process	K15718//linoleate 9S-lipoxygenase [EC:1.13.11.58]	gi|460368706|ref|XP_004230206.1|//PREDICTED: lipoxygenase isoform X2 [Solanum lycopersicum]
Solyc04g078070.3.1	620	4610.66606895615	11401.0585569934	1.30612069453771	3.31096029264762e-38	Up	3.36327794964205e-41	NA	NA	NA	NA	gi|460384812|ref|XP_004238102.1|//PREDICTED: uncharacterized protein At2g23090 [Solanum lycopersicum]
Solyc01g105225.1.1	2338	258.787600476804	1097.22983934178	2.08402536320258	2.1198206575356e-34	Up	2.55207904594203e-37	NA	NA	NA	K17893//ubiquinol oxidase [EC:1.10.3.11]	gi|723664432|ref|XP_004231350.2|//PREDICTED: protein DA1-related 1-like isoform X1 [Solanum lycopersicum]
Solyc08g079090.3.1	2560	2144.21509274812	5716.09584847932	1.41458047380591	3.10341614071566e-12	Up	4.2149481820856e-14	NA	GO:0016682//oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor;GO:0005507//copper ion binding;GO:0046914//transition metal ion binding;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process;GO:0055114//oxidation-reduction process	K19791//iron transport multicopper oxidase	gi|747068856|ref|XP_011081204.1|//PREDICTED: monocopper oxidase-like protein SKU5 [Sesamum indicum];gi|460400431|ref|XP_004245738.1|//PREDICTED: monocopper oxidase-like protein SKU5 [Solanum lycopersicum]
Solyc11g007390.1.1	660	43.0902522656771	13.3302313926325	-1.69265972087775	0.0187718489828358	Down	0.00379009180995992	NA	NA	NA	K13080//flavanone 7-O-glucoside 2''-O-beta-L-rhamnosyltransferase [EC:2.4.1.236];K18823//soyasaponin III rhamnosyltransferase [EC:2.4.1.273]	gi|460409128|ref|XP_004249992.1|//PREDICTED: crocetin glucoside glucosyltransferase-like [Solanum lycopersicum]
Solyc10g080420.2.1	3150	1331.05539093949	596.028303013737	-1.15911786396782	2.69857127163394e-05	Down	1.72087219917965e-06	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K18999//RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16];K01652//acetolactate synthase I/II/III large subunit [EC:2.2.1.6]	gi|460407677|ref|XP_004249277.1|//PREDICTED: extended synaptotagmin-1-like [Solanum lycopersicum];gi|645271536|ref|XP_008240960.1|//PREDICTED: multiple C2 and transmembrane domain-containing protein 1 [Prunus mume]
Solyc09g083410.3.1	1730	342.46766992715	730.02374453687	1.09197559007782	8.67384881880534e-05	Up	6.51028156264735e-06	NA	NA	NA	K18151//ureidoglycolate amidohydrolase [EC:3.5.1.116]	gi|723732222|ref|XP_004247652.2|//PREDICTED: ureidoglycolate hydrolase [Solanum lycopersicum]
Solyc10g076510.2.1	2318	7019.00392108445	2787.04882277829	-1.33252803431147	9.89701038443248e-06	Down	5.49958026253076e-07	NA	NA	NA	K01568//pyruvate decarboxylase [EC:4.1.1.1]	gi|460407254|ref|XP_004249069.1|//PREDICTED: pyruvate decarboxylase 1-like [Solanum lycopersicum]
Solyc02g078800.3.1	4250	203.79812370665	66.3370089722958	-1.61925489927441	2.87635278108564e-09	Down	6.76343298788007e-11	NA	NA	NA	K18643//katanin p80 WD40 repeat-containing subunit B1	gi|460374053|ref|XP_004232826.1|//PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog isoform X1 [Solanum lycopersicum];gi|723674465|ref|XP_010316710.1|//PREDICTED: katanin p80 WD40 repeat-containing subunit B1 homolog isoform X2 [Solanum lycopersicum]
Solyc07g005970.3.1	4708	2013.08142592257	780.248550390694	-1.36739985124216	4.58065865653314e-08	Down	1.39763512808442e-09	NA	NA	NA	K12472//epidermal growth factor receptor substrate 15;K20478//golgin subfamily B member 1	gi|460394055|ref|XP_004242621.1|//PREDICTED: uncharacterized protein LOC101251393 isoform X1 [Solanum lycopersicum]
Solyc03g120990.3.1	1749	39.199226765103	121.760918362463	1.63515404382972	0.000964882808610888	Up	0.000107741616853165	NA	GO:0004471//malate dehydrogenase (decarboxylating) (NAD+) activity;GO:0043169//cation binding;GO:0046872//metal ion binding;GO:0000166//nucleotide binding;GO:0016615//malate dehydrogenase activity;GO:0051287//NAD binding	GO:0043648//dicarboxylic acid metabolic process;GO:0055114//oxidation-reduction process;GO:0006108//malate metabolic process	K00029//malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]	gi|460379793|ref|XP_004235645.1|//PREDICTED: NADP-dependent malic enzyme, chloroplastic isoform X1 [Solanum lycopersicum];gi|661898011|emb|CDO97978.1|//unnamed protein product [Coffea canephora]
Solyc03g118040.3.1	2083	37094.3557900483	10200.7581714869	-1.86252330117228	1.50579726695693e-18	Down	8.27112118042559e-21	GO:0043231//intracellular membrane-bounded organelle	GO:0046872//metal ion binding;GO:0005515//protein binding	GO:0044267//cellular protein metabolic process	K08054//calnexin	gi|350539281|ref|NP_001234129.1|//calnexin-like protein precursor [Solanum lycopersicum]
Solyc07g055630.3.1	610	247.346496893289	96.1783644238987	-1.36274916955092	9.28900406002692e-05	Down	7.05237403804903e-06	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723714823|ref|XP_010323669.1|//PREDICTED: LOW QUALITY PROTEIN: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Solanum lycopersicum]
Solyc04g081130.1.1	1644	29.4152280445749	80.7106760279127	1.4561962980914	0.000343751741915487	Up	3.21119478997801e-05	NA	NA	NA	K20929	gi|460385266|ref|XP_004238325.1|//PREDICTED: galactose oxidase-like [Solanum lycopersicum]
Solyc09g090470.3.1	2011	2160.42422122161	447.371667769929	-2.27176883008085	5.52570087209158e-69	Down	1.87100480996329e-72	GO:0044464//cell part	NA	GO:0015833//peptide transport	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460404576|ref|XP_004247757.1|//PREDICTED: protein NRT1/ PTR FAMILY 5.2-like [Solanum lycopersicum]
Solyc07g056390.3.1	2096	3468.74607795081	1164.67887566185	-1.57448200414971	1.03122037946016e-12	Down	1.29581492377612e-14	NA	NA	NA	K10950//ERO1-like protein alpha [EC:1.8.4.-]	gi|460395256|ref|XP_004243200.1|//PREDICTED: endoplasmic reticulum oxidoreductin-1 [Solanum lycopersicum]
Solyc04g049150.2.1	1053	452.101511125795	1019.64125900903	1.1733430123021	7.05238048802418e-05	Up	5.12876278530878e-06	NA	NA	NA	K17604//zinc finger SWIM domain-containing protein 3	gi|723692873|ref|XP_010319866.1|//PREDICTED: uncharacterized protein LOC104647002 [Solanum lycopersicum];gi|971538789|ref|XP_015159828.1|//PREDICTED: uncharacterized protein LOC102600303 [Solanum tuberosum]
Solyc01g105010.3.1	1001	410.325069266911	1140.59382646995	1.47494592407562	1.70679930636747e-18	Up	9.56783659325634e-21	NA	NA	NA	NA	gi|460369570|ref|XP_004230635.1|//PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Solanum lycopersicum]
Solyc10g047200.1.1	330	85.0962960462366	28.109068414319	-1.59806069667399	0.000564757172240238	Down	5.76428719685873e-05	NA	NA	NA	NA	gi|460406710|ref|XP_004248804.1|//PREDICTED: uncharacterized protein LOC101245808 [Solanum lycopersicum]
Solyc06g051540.3.1	2352	826.879339258703	326.495203132347	-1.3406150264674	7.83378928557998e-11	Down	1.36752378800192e-12	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460390648|ref|XP_004240940.1|//PREDICTED: putative serine/threonine-protein kinase-like protein CCR3 [Solanum lycopersicum]
Solyc01g104010.2.1	1076	203.924415378923	91.4087764812268	-1.15762992077671	0.00768272883585519	Down	0.00129057126606822	NA	NA	NA	K18327//RNA exonuclease 4 [EC:3.1.-.-]	gi|460369262|ref|XP_004230482.1|//PREDICTED: uncharacterized protein LOC101250842 [Solanum lycopersicum]
Solyc01g066430.3.1	903	8323.75356823789	2843.44775669841	-1.54959295592402	7.9987180480174e-18	Down	4.84497218107901e-20	NA	NA	NA	K19038//E3 ubiquitin-protein ligase ATL41 [EC:2.3.2.27];K19041//E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27]	gi|460366788|ref|XP_004229261.1|//PREDICTED: RING-H2 finger protein ATL2-like [Solanum lycopersicum]
BGI_novel_G000226	7589	664.871857652175	64.4360222851589	-3.36713697076178	9.18638345097334e-15	Down	7.87996774575591e-17	NA	NA	NA	K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6];K03549//KUP system potassium uptake protein	gi|970007609|ref|XP_015064694.1|//PREDICTED: uncharacterized protein LOC107009904 [Solanum pennellii]
Solyc04g016330.3.1	2605	192.64452262037	60.5227333794082	-1.67039211668217	4.31491681799833e-07	Down	1.61425884527159e-08	NA	NA	NA	K00006//glycerol-3-phosphate dehydrogenase (NAD+) [EC:1.1.1.8]	gi|460381710|ref|XP_004236586.1|//PREDICTED: probable glycerol-3-phosphate dehydrogenase [NAD(+)] 1, cytosolic [Solanum lycopersicum]
Solyc04g072920.3.1	2566	310.253633607279	631.473142023154	1.02527326733236	2.19018740159445e-05	Up	1.35465315583946e-06	NA	GO:0019203//carbohydrate phosphatase activity	GO:0005991//trehalose metabolic process	K01087//trehalose 6-phosphate phosphatase [EC:3.1.3.12]	gi|460384389|ref|XP_004237894.1|//PREDICTED: probable trehalose-phosphate phosphatase J [Solanum lycopersicum]
Solyc01g007260.3.1	3274	181.382829668352	70.9908762572202	-1.35333236521157	0.00230020823035596	Down	0.000302540555806035	NA	NA	NA	K03695//ATP-dependent Clp protease ATP-binding subunit ClpB	gi|460365387|ref|XP_004228584.1|//PREDICTED: uncharacterized protein LOC101261145 isoform X1 [Solanum lycopersicum]
Solyc07g065160.3.1	558	7.62542592067552	37.8938099051751	2.31307237090821	0.000178307550908228	Up	1.50333792921497e-05	NA	NA	NA	NA	NA
Solyc10g085310.1.1	642	373.50908813106	166.860449215604	-1.16250131224719	0.00121206652174329	Down	0.00014081495181126	NA	NA	NA	K14496//abscisic acid receptor PYR/PYL family	gi|460408477|ref|XP_004249671.1|//PREDICTED: abscisic acid receptor PYL4 [Solanum lycopersicum]
Solyc04g075000.1.1	1491	147.291505874437	37.1765610840673	-1.98620900527973	6.11957579348613e-09	Down	1.56788228569001e-10	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723694537|ref|XP_010320196.1|//PREDICTED: serine/threonine-protein kinase-like protein At3g51990 [Solanum lycopersicum]
Solyc07g045100.1.1	1650	1121.91369818627	328.240821749511	-1.77313512645477	1.01947696261566e-10	Down	1.81802889495794e-12	NA	GO:0008233//peptidase activity	NA	K00924;K02882//large subunit ribosomal protein L18Ae;K01381//saccharopepsin [EC:3.4.23.25]	gi|460396075|ref|XP_004243605.1|//PREDICTED: aspartic proteinase nepenthesin-2-like [Solanum lycopersicum]
Solyc01g100460.3.1	417	231.468734142844	47.0359423928399	-2.29898181827027	1.40443408889735e-09	Down	3.12272590872211e-11	GO:0043231//intracellular membrane-bounded organelle	GO:0003677//DNA binding;GO:0005515//protein binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0006351//transcription, DNA-templated	K09060//plant G-box-binding factor	gi|350536489|ref|NP_001234505.1|//anaerobic basic leucine zipper protein [Solanum lycopersicum]
Solyc01g009260.1.1	1416	5.65276485691384	18.356599273075	1.69927022084608	0.0435000382434669	Up	0.0107735422030377	NA	NA	NA	K20642;K09528//DnaJ homolog subfamily C member 8	gi|460365981|ref|XP_004228872.1|//PREDICTED: protein FAF-like, chloroplastic [Solanum lycopersicum]
Solyc05g016130.2.1	246	86.2784769820207	215.288776237919	1.31920049381626	0.000558712234788251	Up	5.68381445774053e-05	GO:0009534//chloroplast thylakoid	NA	GO:0044237//cellular metabolic process	NA	gi|998437753|gb|AMK46185.1|//photosystem I assembly protein Ycf3 (chloroplast) [Schefflera heptaphylla]
Solyc11g005720.1.1	696	1248.79273575241	600.699453432258	-1.05581879398215	2.11835300993985e-08	Down	6.02845174514284e-10	NA	NA	NA	K20725	gi|460408923|ref|XP_004249890.1|//PREDICTED: protein MKS1 [Solanum lycopersicum]
Solyc03g008010.3.1	2465	3778.37135419758	10821.3096441058	1.51803870331377	2.18021100980476e-11	Up	3.37120664044303e-13	NA	NA	NA	K08825//dual specificity tyrosine-phosphorylation-regulated kinase 1 [EC:2.7.12.1]	gi|460376886|ref|XP_004234227.1|//PREDICTED: desumoylating isopeptidase 2 [Solanum lycopersicum]
Solyc12g094620.2.1	2648	21312.4670651813	47980.0929727765	1.17073834849988	0.00181721369251181	Up	0.000227596101669368	GO:0005777//peroxisome;GO:0009514//glyoxysome	GO:0020037//heme binding;GO:0046872//metal ion binding;GO:0004096//catalase activity;GO:0004601//peroxidase activity;GO:0005506//iron ion binding	GO:0006979//response to oxidative stress;GO:0042743//hydrogen peroxide metabolic process;GO:0098869//cellular oxidant detoxification;GO:0006950//response to stress;GO:0042744//hydrogen peroxide catabolic process;GO:0055114//oxidation-reduction process	K03781//catalase [EC:1.11.1.6]	gi|350537883|ref|NP_001234827.1|//catalase isozyme 1 [Solanum lycopersicum];gi|697100359|ref|XP_009590727.1|//PREDICTED: catalase isozyme 1 [Nicotiana tomentosiformis]
Solyc01g109800.2.1	1195	21.3813991325413	67.6241001422597	1.66118122982623	0.00238522154244492	Up	0.000315965577537568	NA	NA	NA	NA	gi|723665897|ref|XP_010315310.1|//PREDICTED: uncharacterized protein LOC104645424 [Solanum lycopersicum]
Solyc07g005070.1.1	1056	39.266543907908	12.5536188933202	-1.64519730614067	0.00382203610656416	Down	0.000559501222371752	NA	NA	NA	K06237//collagen, type IV, alpha;K12823//ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]	gi|970039677|ref|XP_015081175.1|//PREDICTED: collagen alpha chain-like [Solanum pennellii]
Solyc01g099600.3.1	1694	758.498547427434	233.647343523146	-1.69881378319263	3.43119547282233e-06	Down	1.63556232658611e-07	NA	NA	NA	K07213//copper chaperone	gi|460368756|ref|XP_004230231.1|//PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 2 [Solanum lycopersicum]
Solyc01g099650.3.1	4107	80.6127708670456	9.46995034153296	-3.08957964641095	1.10859084990624e-10	Down	1.99779916141869e-12	NA	NA	NA	K19984//exocyst complex component 5;K02184//formin 2	gi|723662869|ref|XP_010313078.1|//PREDICTED: formin-like protein 11 [Solanum lycopersicum]
Solyc02g078400.3.1	2436	6070.7780031375	1238.54028326052	-2.29324062482776	1.63210424852203e-14	Down	1.46754294731665e-16	NA	GO:0016812//hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides;GO:0046914//transition metal ion binding	GO:0000255//allantoin metabolic process	K01466//allantoinase [EC:3.5.2.5];K07456//DNA mismatch repair protein MutS2	gi|460374125|ref|XP_004232862.1|//PREDICTED: DNA mismatch repair protein MSH2 isoform X1 [Solanum lycopersicum];gi|460374121|ref|XP_004232860.1|//PREDICTED: allantoinase [Solanum lycopersicum]
Solyc01g091770.3.1	2720	66.3832041519617	140.931344685314	1.08610234711671	0.0273680557338062	Up	0.00601314693323658	NA	GO:0046914//transition metal ion binding	NA	K19041//E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27];K10664//E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:2.3.2.27]	gi|969995372|ref|XP_015076977.1|//PREDICTED: RING-H2 finger protein ATL64-like [Solanum pennellii]
Solyc05g052300.3.1	1759	111.377365349551	384.815901687005	1.78871234564454	5.34614569803516e-08	Up	1.64527734424107e-09	GO:0016020//membrane	NA	NA	K14993//solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 6	gi|460388617|ref|XP_004239963.1|//PREDICTED: probable sodium-coupled neutral amino acid transporter 6 [Solanum lycopersicum]
BGI_novel_G000236	1466	1.64382321144686	35.5197695899957	4.43349516853971	8.07491112848351e-08	Up	2.58530826574096e-09	NA	NA	NA	K03549//KUP system potassium uptake protein;K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|970033999|ref|XP_015078301.1|//PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Solanum pennellii]
Solyc01g010310.3.1	1097	577.594777234196	133.955403857846	-2.10830491533598	7.99133101677805e-20	Down	3.8483460125944e-22	GO:0016020//membrane;GO:0016021//integral component of membrane	NA	NA	K19892//glucan endo-1,3-beta-glucosidase 4 [EC:3.2.1.39];K19891//glucan endo-1,3-beta-glucosidase 1/2/3 [EC:3.2.1.39]	gi|460365031|ref|XP_004228409.1|//PREDICTED: PLASMODESMATA CALLOSE-BINDING PROTEIN 1 [Solanum lycopersicum]
Solyc05g056540.3.1	806	278.506091199547	642.865878395171	1.20680889730949	0.000513956168335447	Up	5.14922978283407e-05	NA	NA	NA	K00121//S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]	gi|460387940|ref|XP_004239630.1|//PREDICTED: alcohol dehydrogenase 1B [Solanum lycopersicum]
Solyc11g042640.2.1	1359	755.771217718472	1537.56194285059	1.02462305049496	8.70593545827124e-06	Up	4.76238907311e-07	NA	NA	NA	NA	gi|460410611|ref|XP_004250718.1|//PREDICTED: uncharacterized protein LOC101267576 [Solanum lycopersicum]
Solyc04g015360.3.1	1756	4766.11581549751	1946.22902077891	-1.292132521134	0.00064451845754532	Down	6.7070656642978e-05	GO:0005634//nucleus;GO:0005667//transcription factor complex	GO:0001228//transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding;GO:0003682//chromatin binding;GO:0000977//RNA polymerase II regulatory region sequence-specific DNA binding;GO:0008270//zinc ion binding;GO:0001085//RNA polymerase II transcription factor binding	GO:0030154//cell differentiation;GO:0045944//positive regulation of transcription from RNA polymerase II promoter	K17604//zinc finger SWIM domain-containing protein 3;K17895//GATA-binding protein 3	gi|460381805|ref|XP_004236632.1|//PREDICTED: GATA transcription factor 8 [Solanum lycopersicum]
Solyc05g050120.3.1	2190	98849.8772582968	40983.9065464848	-1.2701816673591	1.08374086913484e-12	Down	1.36996588423366e-14	NA	GO:0043169//cation binding;GO:0000166//nucleotide binding;GO:0016615//malate dehydrogenase activity	GO:0043648//dicarboxylic acid metabolic process	K00029//malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+) [EC:1.1.1.40]	gi|922959905|ref|NP_001233951.2|//cytosolic NADP-malic enzyme [Solanum lycopersicum]
Solyc04g010190.1.1	570	235.637185377797	528.950050086593	1.16656426629888	0.000600443483426508	Up	6.17837820606283e-05	NA	NA	NA	K14826//FK506-binding nuclear protein [EC:5.2.1.8]	gi|460382089|ref|XP_004236772.1|//PREDICTED: uncharacterized protein LOC101268563 [Solanum lycopersicum]
Solyc01g067010.3.1	1473	1104.30814348575	251.280425511434	-2.13577259820527	1.00331743202677e-20	Down	4.26542023397386e-23	NA	NA	NA	K01889//phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20];K15030//translation initiation factor 3 subunit M;K04079//molecular chaperone HtpG	gi|723658148|ref|XP_010321279.1|//PREDICTED: F-box/kelch-repeat protein At3g23880-like [Solanum lycopersicum]
Solyc08g068780.2.1	806	1255.08420369275	443.271885732846	-1.50152038953555	9.49650544485345e-12	Down	1.38981964561625e-13	NA	GO:0016407//acetyltransferase activity	NA	NA	gi|350537063|ref|NP_001234022.1|//N-hydroxycinnamoyl-CoA:tyramine N-hydroxycinnamoyl transferase THT7-8 [Solanum lycopersicum]
Solyc01g079400.3.1	2358	49.2805207873872	17.0518870165098	-1.53108610090199	0.0421376675821524	Down	0.0103267406557615	NA	NA	NA	K16573//gamma-tubulin complex component 6	gi|460367046|ref|XP_004229386.1|//PREDICTED: protein trichome birefringence-like 6 [Solanum lycopersicum]
Solyc02g091730.2.1	2304	1097.84018942639	2466.15265878757	1.16759404846358	4.35982320415089e-05	Up	2.95411647504731e-06	NA	NA	NA	K15193//protein SPT2	gi|723669776|ref|XP_010316052.1|//PREDICTED: uncharacterized protein LOC101249596 isoform X3 [Solanum lycopersicum];gi|723669770|ref|XP_010316049.1|//PREDICTED: uncharacterized protein LOC101249596 isoform X1 [Solanum lycopersicum]
Solyc01g106470.3.1	1456	446.867972027371	39.0605091708508	-3.51606598681165	4.66708791618012e-18	Down	2.72159001884093e-20	NA	NA	NA	NA	gi|460369628|ref|XP_004230659.1|//PREDICTED: uncharacterized protein LOC101254738 [Solanum lycopersicum]
Solyc12g009010.2.1	2344	19.4258047478348	58.1394990667246	1.58154427515536	0.000596212877402475	Up	6.1326034869013e-05	NA	NA	NA	K08790//serine/threonine kinase 38 [EC:2.7.11.1]	gi|460412586|ref|XP_004251679.1|//PREDICTED: serine/threonine-protein kinase 38-like [Solanum lycopersicum]
Solyc10g077020.2.1	2866	736.43705235395	323.944303940636	-1.1848164243541	9.12168724929493e-05	Down	6.90475347839782e-06	NA	NA	NA	NA	gi|460407308|ref|XP_004249095.1|//PREDICTED: uncharacterized protein LOC101255641 [Solanum lycopersicum]
Solyc06g069650.3.1	3240	332.397173670764	160.986007934828	-1.04597281286379	0.000122563099139217	Down	9.67409262581177e-06	NA	NA	NA	K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1];K13415//protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1]	gi|460391965|ref|XP_004241588.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g74360 [Solanum lycopersicum]
Solyc01g103360.3.1	890	18.9893431388364	4.29108394314697	-2.14577597322685	0.0134894013507004	Down	0.00252380710748807	NA	NA	NA	K18801//glucuronoxylan 4-O-methyltransferase [EC:2.1.1.112]	gi|460369174|ref|XP_004230438.1|//PREDICTED: glucuronoxylan 4-O-methyltransferase 1 [Solanum lycopersicum]
Solyc05g009880.3.1	2161	341.170203428344	129.340956643264	-1.39931246626176	0.0328375327202692	Down	0.00754596124361941	NA	NA	NA	NA	gi|460386566|ref|XP_004238969.1|//PREDICTED: transcription factor bHLH30-like [Solanum lycopersicum]
Solyc10g055810.2.1	1028	701.805122431449	2051.11498352553	1.54726598714426	1.15449821844148e-06	Up	4.86035931691503e-08	GO:0043231//intracellular membrane-bounded organelle;GO:0030312//external encapsulating structure	GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0030247//polysaccharide binding	GO:0033554//cellular response to stress;GO:0006026//aminoglycan catabolic process	K20547;K01183//chitinase [EC:3.2.1.14]	gi|350534566|ref|NP_001234403.1|//basic 30 kDa endochitinase precursor [Solanum lycopersicum]
Solyc07g005110.3.1	1929	125.0463401246	62.4590101716198	-1.00148122178804	0.0393702176329192	Down	0.00950780387455638	GO:0009506//plasmodesma;GO:0016021//integral component of membrane;GO:0005886//plasma membrane	GO:0005524//ATP binding;GO:0004674//protein serine/threonine kinase activity;GO:0004568//chitinase activity	GO:0006032//chitin catabolic process;GO:0006952//defense response;GO:0005975//carbohydrate metabolic process;GO:0006468//protein phosphorylation	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K01183//chitinase [EC:3.2.1.14]	gi|698530448|ref|XP_009762048.1|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 [Nicotiana sylvestris];gi|723711986|ref|XP_010323171.1|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11410 isoform X1 [Solanum lycopersicum]
Solyc12g044950.2.1	1046	5288.23467586046	1392.72776031262	-1.92487292211703	5.8452797960508e-08	Down	1.81867810057713e-09	NA	GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K10256//omega-6 fatty acid desaturase / acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.6 1.14.19.22]	gi|971549129|ref|XP_015163857.1|//PREDICTED: delta(12)-acyl-lipid-desaturase-like isoform X3 [Solanum tuberosum];gi|802083979|ref|NP_001292750.1|//lipid desaturase-like protein [Solanum lycopersicum]
Solyc11g018800.2.1	1017	2768.27230392634	1332.97868158632	-1.0543321546258	1.28667953741092e-05	Down	7.38219072442308e-07	NA	GO:0016209//antioxidant activity;GO:0005506//iron ion binding;GO:0003824//catalytic activity	GO:0042743//hydrogen peroxide metabolic process;GO:0006950//response to stress	K00430//peroxidase [EC:1.11.1.7]	gi|460409955|ref|XP_004250402.1|//PREDICTED: lignin-forming anionic peroxidase [Solanum lycopersicum]
Solyc10g008580.1.1	1158	82.7637938906691	34.5454790628303	-1.26050286111969	0.0029309223310143	Down	0.000406557962168913	NA	NA	NA	K17535//serine/threonine-protein kinase TNNI3K [EC:2.7.11.1];K11649//SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C;K08955//ATP-dependent metalloprotease [EC:3.4.24.-];K04079//molecular chaperone HtpG	gi|460406010|ref|XP_004248467.1|//PREDICTED: F-box protein At3g07870-like [Solanum lycopersicum]
Solyc02g083810.3.1	1707	5385.53545767513	11111.5293892716	1.04489570554192	7.13207296964496e-05	Up	5.20013446770953e-06	GO:0009532//plastid stroma;GO:0009534//chloroplast thylakoid;GO:0034357//photosynthetic membrane	GO:0000166//nucleotide binding;GO:0050662//coenzyme binding;GO:0008937//ferredoxin-NAD(P) reductase activity	GO:0006091//generation of precursor metabolites and energy;GO:0051234//establishment of localization	K02641//ferredoxin--NADP+ reductase [EC:1.18.1.2]	gi|460373374|ref|XP_004232495.1|//PREDICTED: ferredoxin--NADP reductase, leaf-type isozyme, chloroplastic [Solanum lycopersicum]
Solyc05g013560.3.1	640	36.856928739849	75.8179542387357	1.04060367216719	0.0331695704306821	Up	0.00764382382675927	NA	NA	NA	NA	gi|697120887|ref|XP_009614414.1|//PREDICTED: uncharacterized protein LOC104107349 isoform X1 [Nicotiana tomentosiformis]
Solyc09g091000.3.1	550	118.749430022331	274.405435192167	1.20838846872215	0.0373629865968756	Up	0.00889655162421465	NA	NA	GO:0006950//response to stress	NA	gi|460404654|ref|XP_004247796.1|//PREDICTED: pathogenesis-related protein STH-2 [Solanum lycopersicum]
Solyc02g037495.1.1	1653	8828.4158105504	2569.32557323676	-1.78076486730569	1.89405795554455e-12	Down	2.45130149250311e-14	NA	GO:0016405//CoA-ligase activity	NA	K00666//fatty-acyl-CoA synthase [EC:6.2.1.-];K01904//4-coumarate--CoA ligase [EC:6.2.1.12]	gi|460371618|ref|XP_004231632.1|//PREDICTED: probable acyl-activating enzyme 6 [Solanum lycopersicum]
Solyc10g076250.2.1	1750	1497.80509785822	494.543848668693	-1.59867955692941	0.000283063313202724	Down	2.56120115971615e-05	NA	NA	NA	K00827//alanine-glyoxylate transaminase / (R)-3-amino-2-methylpropionate-pyruvate transaminase [EC:2.6.1.44 2.6.1.40]	gi|460407230|ref|XP_004249057.1|//PREDICTED: alanine--glyoxylate aminotransferase 2 homolog 2, mitochondrial-like [Solanum lycopersicum]
Solyc12g019690.2.1	1389	247.223981015309	522.991602140503	1.0809690876618	8.82869901933252e-06	Up	4.83618727319343e-07	NA	NA	NA	K09875//aquaporin SIP	gi|565324152|ref|NP_001274290.1|//aquaporin SIP1-2-like [Solanum lycopersicum]
Solyc01g080910.2.1	1275	672.739632329673	137.002193528585	-2.29584926027401	0.00533773055506327	Down	0.000831987121505911	NA	NA	NA	NA	gi|460367295|ref|XP_004229510.1|//PREDICTED: uncharacterized protein LOC101252815 [Solanum lycopersicum]
Solyc02g089620.3.1	1940	3394.54713269667	1038.16918143281	-1.70917755067478	4.56328193493592e-34	Down	5.66547418558635e-37	NA	GO:0016645//oxidoreductase activity, acting on the CH-NH group of donors	GO:0006536//glutamate metabolic process;GO:0006560//proline metabolic process	K00318//proline dehydrogenase [EC:1.5.-.-]	gi|460372587|ref|XP_004232110.1|//PREDICTED: proline dehydrogenase 2, mitochondrial [Solanum lycopersicum]
Solyc04g081810.3.1	2571	10.2331291332548	205.226113987291	4.32589504671014	1.64012601042103e-20	Up	7.1758449919119e-23	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13199//plasminogen activator inhibitor 1 RNA-binding protein	gi|460385373|ref|XP_004238378.1|//PREDICTED: CO(2)-response secreted protease [Solanum lycopersicum]
BGI_novel_G000166	893	27.6203373441528	83.4475757296314	1.59513919763595	0.00178447194860195	Up	0.00022275688207153	NA	NA	NA	NA	gi|460382645|ref|XP_004237048.1|//PREDICTED: uncharacterized protein LOC101249814 [Solanum lycopersicum]
Solyc09g075820.3.1	1987	27718.3887040449	12328.9572249617	-1.16879261198613	1.14354919650317e-09	Down	2.50823619850018e-11	GO:0031224//intrinsic component of membrane	GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;GO:0022857//transmembrane transporter activity	GO:0071702//organic substance transport;GO:0008152//metabolic process	K16055//trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12];K08150//MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13	gi|803378365|ref|NP_001234785.2|//hexose transporter protein [Solanum lycopersicum]
Solyc09g056260.3.1	2062	373.446923997018	779.44410049962	1.0615423455769	7.54511466595345e-09	Up	1.97569593961761e-10	NA	NA	NA	K06173//tRNA pseudouridine38-40 synthase [EC:5.4.99.12]	gi|723729712|ref|XP_010326264.1|//PREDICTED: putative tRNA pseudouridine synthase isoform X2 [Solanum lycopersicum];gi|460403086|ref|XP_004247032.1|//PREDICTED: putative tRNA pseudouridine synthase isoform X1 [Solanum lycopersicum]
Solyc02g062790.3.1	2453	62.7004786276078	345.364636673966	2.46157200578987	7.90556099596237e-05	Up	5.84737882545599e-06	NA	GO:0004674//protein serine/threonine kinase activity;GO:0000166//nucleotide binding	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723677670|ref|XP_010317211.1|//PREDICTED: proline-rich receptor-like protein kinase PERK4 [Solanum lycopersicum]
Solyc07g055320.3.1	2759	7335.82862984254	15444.0508252927	1.07401936514853	1.38406760101611e-07	Up	4.68125196882424e-09	GO:0044464//cell part;GO:0016021//integral component of membrane	GO:0004175//endopeptidase activity;GO:0005524//ATP binding;GO:0004222//metalloendopeptidase activity;GO:0032559//adenyl ribonucleotide binding;GO:0042623//ATPase activity, coupled	GO:0006508//proteolysis;GO:0019538//protein metabolic process;GO:0009987//cellular process;GO:0009057//macromolecule catabolic process	K03798//cell division protease FtsH [EC:3.4.24.-]	gi|460395390|ref|XP_004243266.1|//PREDICTED: ATP-dependent zinc metalloprotease FTSH 2, chloroplastic [Solanum lycopersicum]
Solyc07g063180.3.1	1773	81.9091518536574	26.5460308933784	-1.6255284872972	0.000407525122790202	Down	3.92806382463694e-05	NA	NA	NA	K10418//dynein light chain LC8-type	gi|460397624|ref|XP_004244367.1|//PREDICTED: dynein light chain, cytoplasmic-like [Solanum lycopersicum]
Solyc06g051160.3.1	1030	194.683724776857	397.361710486957	1.02932057985428	1.53350564263755e-05	Up	9.00602824739358e-07	NA	NA	NA	K03188//urease accessory protein	gi|460390604|ref|XP_004240918.1|//PREDICTED: uncharacterized protein LOC101247227 isoform X1 [Solanum lycopersicum]
Solyc05g015715.1.1	1365	121.195011893965	1.84812426492417	-6.03512474729455	9.45926007118732e-17	Down	6.37023157540455e-19	NA	NA	NA	NA	gi|113205226|gb|ABI34306.1|//Polyprotein, putative [Solanum demissum];gi|970033776|ref|XP_015078191.1|//PREDICTED: uncharacterized protein LOC107022001 [Solanum pennellii]
Solyc12g033090.2.1	433	48.4655522978395	99.4182570605567	1.03655111915775	0.027673958374086	Up	0.00609805771997824	GO:0030529//intracellular ribonucleoprotein complex;GO:0009536//plastid	GO:0003723//RNA binding;GO:0005198//structural molecule activity	GO:0010467//gene expression	K02892//large subunit ribosomal protein L23	gi|340807210|gb|AEK71798.1|//ribosomal protein L23 [Erythrospermum phytolaccoides]
Solyc07g062150.3.1	2559	156.022374465734	327.318251659356	1.06894111671713	0.00405879908396518	Up	0.000600115891647221	NA	NA	NA	K00858//NAD+ kinase [EC:2.7.1.23]	gi|723718929|ref|XP_010324401.1|//PREDICTED: NADH kinase isoform X1 [Solanum lycopersicum];gi|723718934|ref|XP_010324402.1|//PREDICTED: NADH kinase isoform X3 [Solanum lycopersicum];gi|723718937|ref|XP_010324403.1|//PREDICTED: NADH kinase isoform X4 [Solanum lycopersicum]
Solyc01g087960.2.1	1464	34.2324261942033	7.89634855291567	-2.1161059674103	0.031646227358163	Down	0.00719243263621756	NA	NA	NA	K16297//serine carboxypeptidase-like clade II [EC:3.4.16.-]	gi|969998179|ref|XP_015071486.1|//PREDICTED: serine carboxypeptidase-like 40 isoform X2 [Solanum pennellii]
Solyc05g044630.3.1	1200	249.468615272507	499.328223678877	1.00113012802698	1.41017657087882e-05	Up	8.17811796412438e-07	GO:0009570//chloroplast stroma	GO:0005506//iron ion binding;GO:0005488//binding;GO:0051536//iron-sulfur cluster binding	GO:0016226//iron-sulfur cluster assembly	K09571//FK506-binding protein 4/5 [EC:5.2.1.8]	gi|460388994|ref|XP_004240148.1|//PREDICTED: nifU-like protein 3, chloroplastic [Solanum lycopersicum]
Solyc05g006820.3.1	1406	186.878145686069	51.3765292135788	-1.8629165280237	7.83060903041029e-09	Down	2.06366617117054e-10	NA	GO:0005515//protein binding	GO:0044267//cellular protein metabolic process	K09510//DnaJ homolog subfamily B member 4	gi|460386123|ref|XP_004238749.1|//PREDICTED: dnaJ homolog subfamily B member 1-like [Solanum lycopersicum]
Solyc03g111730.3.1	3069	1554.7925532493	635.061978821823	-1.29175279937886	1.68966912127338e-08	Down	4.73590479815151e-10	GO:0031410//cytoplasmic vesicle	GO:0070011//peptidase activity, acting on L-amino acid peptides;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K16292//KDEL-tailed cysteine endopeptidase [EC:3.4.22.-]	gi|460381115|ref|XP_004236298.1|//PREDICTED: vignain-like [Solanum lycopersicum]
Solyc05g008637.1.1	607	4.71344234858384	196.292553576074	5.38008055230228	8.96426616421078e-22	Up	3.17020699562006e-24	NA	NA	NA	NA	NA
Solyc01g096140.3.1	4526	28.0107128825018	8.36969122792816	-1.74273239556751	0.017035003437797	Down	0.00336470158195765	NA	NA	NA	K03695//ATP-dependent Clp protease ATP-binding subunit ClpB	gi|460368287|ref|XP_004229999.1|//PREDICTED: aluminum-activated malate transporter 10 [Solanum lycopersicum]
Solyc12g094660.2.1	3585	3649.32429704656	1111.11847570948	-1.71561670585596	6.93068877232921e-23	Down	2.12592122492145e-25	NA	NA	NA	K13457//disease resistance protein RPM1	gi|723753706|ref|XP_004253120.2|//PREDICTED: putative inactive disease susceptibility protein LOV1 [Solanum lycopersicum]
Solyc06g083720.2.1	2880	40.9685323474982	4.55185572445439	-3.16998947494166	4.60705024433956e-05	Down	3.14763101720115e-06	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13199//plasminogen activator inhibitor 1 RNA-binding protein;K12663//Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase [EC:5.3.3.-]	gi|460393878|ref|XP_004242535.1|//PREDICTED: subtilisin-like protease SDD1 [Solanum lycopersicum];gi|565372500|ref|XP_006352831.1|//PREDICTED: subtilisin-like protease SBT1.2 [Solanum tuberosum]
Solyc04g051150.3.1	2676	32.1785413012386	72.9984257185006	1.18176642307909	0.0114107119304669	Up	0.00206320096079096	NA	GO:0016758//transferase activity, transferring hexosyl groups	GO:0044238//primary metabolic process	K05841//sterol 3beta-glucosyltransferase [EC:2.4.1.173]	gi|460383564|ref|XP_004237491.1|//PREDICTED: sterol 3-beta-glucosyltransferase UGT80A2-like [Solanum lycopersicum]
Solyc08g074970.1.1	1446	320.135439930411	149.777240980497	-1.09586397689197	0.000281163652569493	Down	2.53766592368026e-05	NA	NA	NA	K06119//sulfoquinovosyltransferase [EC:2.4.1.-];K03857//phosphatidylinositol glycan, class A [EC:2.4.1.198]	gi|460401049|ref|XP_004246042.1|//PREDICTED: uncharacterized protein LOC101261544 [Solanum lycopersicum]
Solyc03g032090.1.1	1284	316.005017540636	73.8216390270943	-2.09783179122481	1.8076344658573e-14	Down	1.64577705318836e-16	GO:0031224//intrinsic component of membrane	NA	NA	K14209//solute carrier family 36 (proton-coupled amino acid transporter)	gi|723680043|ref|XP_010317678.1|//PREDICTED: proton-coupled amino acid transporter 3-like [Solanum lycopersicum]
Solyc02g086170.3.1	1849	237.297610645342	622.138768658329	1.39053883670547	1.08998284717492e-07	Up	3.60047005199239e-09	NA	NA	NA	NA	gi|723671979|ref|XP_004232346.2|//PREDICTED: uncharacterized protein LOC101265390 [Solanum lycopersicum]
Solyc09g072820.3.1	7184	333.127718829998	159.144849479548	-1.0657349357696	0.0269641877212376	Down	0.00590513682187074	NA	NA	NA	K10999//cellulose synthase A [EC:2.4.1.12]	gi|460404056|ref|XP_004247501.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g08850 [Solanum lycopersicum]
Solyc08g082930.2.1	7979	154.499926573614	69.4108640397678	-1.15437275935908	0.0247992779336498	Down	0.00531812957945086	NA	NA	NA	K08867//WNK lysine deficient protein kinase [EC:2.7.11.1]	gi|460401141|ref|XP_004246087.1|//PREDICTED: transcription factor bHLH157 isoform X2 [Solanum lycopersicum]
Solyc09g075320.1.1	597	38.4138972102417	84.8907982982847	1.14397984471547	0.0160401322119	Up	0.00311992037379695	NA	NA	NA	K19040//E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:2.3.2.27];K19041//E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27];K10664//E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:2.3.2.27]	gi|723731809|ref|XP_010326655.1|//PREDICTED: RING-H2 finger protein ATL2-like [Solanum lycopersicum]
Solyc04g077357.1.1	956	16.0928027072984	60.6519802527668	1.91413914294272	0.000874484286476446	Up	9.59366508414341e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723694987|ref|XP_010320278.1|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 [Solanum lycopersicum]
Solyc01g017500.2.1	1768	1267.5310979988	3923.02766484884	1.62994636602264	1.41217267672087e-05	Up	8.21907874675392e-07	GO:0009536//plastid	NA	NA	NA	gi|545718613|ref|YP_008577454.1|//hypothetical protein EGUI_CP_p070 (chloroplast) [Eucalyptus guilfoylei]
Solyc11g007130.2.1	1890	172.501073873987	387.334853762773	1.16697598286605	3.91996150542068e-09	Up	9.52706972348292e-11	GO:0044464//cell part;GO:0016021//integral component of membrane	GO:0005215//transporter activity	GO:0006810//transport;GO:0055085//transmembrane transport	NA	gi|723740889|ref|XP_010312533.1|//PREDICTED: hippocampus abundant transcript-like protein 1 [Solanum lycopersicum]
Solyc08g077360.3.1	2411	64.7885446454562	252.988664203228	1.96526208695588	3.53929452259761e-11	Up	5.75235227149046e-13	NA	GO:0032561//guanyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity	GO:0009207//purine ribonucleoside triphosphate catabolic process	K01528//dynamin GTPase [EC:3.6.5.5]	gi|460400675|ref|XP_004245858.1|//PREDICTED: dynamin-related protein 1E-like [Solanum lycopersicum]
Solyc05g007900.2.1	768	534.024092271742	142.148228017244	-1.90950871509225	1.90892162913179e-13	Down	2.04681213055892e-15	NA	NA	NA	K11982//E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]	gi|460386272|ref|XP_004238823.1|//PREDICTED: E3 ubiquitin-protein ligase RING1-like [Solanum lycopersicum]
Solyc08g066875.1.1	2740	4208.15490537255	2077.16999632895	-1.018568520618	5.35310749385252e-06	Down	2.71079107852727e-07	GO:0005634//nucleus;GO:0005737//cytoplasm	GO:0005524//ATP binding;GO:0004674//protein serine/threonine kinase activity;GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process;GO:0018105//peptidyl-serine phosphorylation;GO:0006897//endocytosis;GO:0016055//Wnt signaling pathway;GO:0008360//regulation of cell shape	K08960//casein kinase 1, epsilon [EC:2.7.11.1];K08959//casein kinase 1, delta [EC:2.7.11.1]	gi|970048097|ref|XP_015085595.1|//PREDICTED: casein kinase I-like [Solanum pennellii];gi|697174400|ref|XP_009596128.1|//PREDICTED: casein kinase I-like [Nicotiana tomentosiformis]
Solyc11g006460.2.1	352	17.1978539703208	51.2957779589488	1.57661153587057	0.0293508100371239	Up	0.00655148066028051	GO:0044424//intracellular part	GO:0043169//cation binding;GO:0005515//protein binding;GO:0032559//adenyl ribonucleotide binding	GO:0044267//cellular protein metabolic process;GO:0006950//response to stress	K09503//DnaJ homolog subfamily A member 2	gi|970062769|ref|XP_015058290.1|//PREDICTED: dnaJ protein homolog 2 isoform X2 [Solanum pennellii]
Solyc01g065680.2.1	453	48.667460964138	15.9034093224656	-1.61362143051196	0.00292309672002714	Down	0.000405142525078254	NA	NA	NA	NA	NA
Solyc04g079810.2.1	855	37.1040759258396	80.261523706083	1.11313086760626	0.0291423402103369	Up	0.00649131116617479	NA	GO:0003824//catalytic activity	NA	NA	gi|970026182|ref|XP_015074395.1|//PREDICTED: F-box/FBD/LRR-repeat protein At1g13570-like isoform X2 [Solanum pennellii]
Solyc02g091810.2.1	2540	2.03189239081054	7.77587457687468	1.93618094989737	0.0468096462997545	Up	0.0118538649075864	NA	NA	NA	K01681//aconitate hydratase [EC:4.2.1.3];K13422//transcription factor MYC2	gi|460375645|ref|XP_004233615.1|//PREDICTED: transcription factor bHLH18-like [Solanum lycopersicum]
Solyc10g086410.3.1	2329	80589.5227786404	23906.8895271202	-1.75316585376824	3.02257920563541e-09	Down	7.11864026609393e-11	NA	GO:0032559//adenyl ribonucleotide binding	GO:0050896//response to stimulus	K03283//heat shock 70kDa protein 1/8	gi|460408280|ref|XP_004249574.1|//PREDICTED: heat shock cognate 70 kDa protein 2 [Solanum lycopersicum]
Solyc11g071290.2.1	1504	130.237199217054	54.5103424702082	-1.25653969013572	0.00343899269633062	Down	0.00049372445933776	NA	GO:0046872//metal ion binding;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K00121//S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]	gi|460411555|ref|XP_004251174.1|//PREDICTED: alcohol dehydrogenase-like 3 [Solanum lycopersicum]
Solyc04g078940.3.1	2380	306.140519249541	97.7526342258193	-1.64698651988128	0.0179760400013288	Down	0.0035979131981591	NA	NA	NA	NA	gi|350537733|ref|NP_001234563.1|//dem protein [Solanum lycopersicum]
Solyc12g010900.1.1	2169	564.395265781974	136.039550785722	-2.05267973921627	8.75972828315397e-12	Down	1.27540061910481e-13	NA	NA	NA	K10268//F-box and leucine-rich repeat protein 2/20	gi|460412841|ref|XP_004251806.1|//PREDICTED: F-box/LRR-repeat MAX2 homolog A-like [Solanum lycopersicum]
Solyc04g007790.3.1	816	1971.24656367489	4577.02903821675	1.21530320483501	1.57121287879906e-09	Up	3.52902215441324e-11	NA	NA	GO:0006950//response to stress	NA	gi|460382589|ref|XP_004237021.1|//PREDICTED: kirola-like [Solanum lycopersicum]
Solyc12g009370.2.1	345	6.49405570061071	20.1696614167641	1.63499520195253	0.0337676261217194	Up	0.00783083699827985	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K17535//serine/threonine-protein kinase TNNI3K [EC:2.7.11.1];K04365//B-Raf proto-oncogene serine/threonine-protein kinase [EC:2.7.11.1]	gi|460413388|ref|XP_004252071.1|//PREDICTED: serine/threonine-protein kinase HT1-like [Solanum lycopersicum]
Solyc08g080050.3.1	1377	1514.7674720092	3896.6466673401	1.36313677314694	1.13602044308144e-10	Up	2.06005212026055e-12	NA	NA	NA	NA	gi|460400289|ref|XP_004245668.1|//PREDICTED: PGR5-like protein 1A, chloroplastic [Solanum lycopersicum]
Solyc05g052040.1.1	1098	904.443715115685	434.384009897429	-1.0580597274746	0.0430517016054466	Down	0.010609053631139	NA	NA	NA	K09286//EREBP-like factor	gi|985567513|ref|NP_001306589.1|//ethylene-responsive transcription factor 5 [Solanum lycopersicum]
Solyc03g120080.3.1	3314	531.370485633688	255.534236177174	-1.05620150250511	1.77744246062917e-06	Down	7.85739236734115e-08	NA	GO:0004683//calmodulin-dependent protein kinase activity	NA	K14558//periodic tryptophan protein 2	gi|460379939|ref|XP_004235716.1|//PREDICTED: periodic tryptophan protein 2 homolog [Solanum lycopersicum]
Solyc11g073120.2.1	1166	45.573387732309	143.377570297985	1.65355582585873	1.84171393931697e-06	Up	8.16922774437436e-08	NA	NA	NA	K09422//myb proto-oncogene protein, plant	gi|460411832|ref|XP_004251308.1|//PREDICTED: transcription factor MYB48 [Solanum lycopersicum]
Solyc11g069780.2.1	2866	1119.31577834348	523.225804871039	-1.09711150326713	1.47491806755072e-07	Down	5.0162751432124e-09	NA	NA	NA	K05715//2-phosphoglycerate kinase [EC:2.7.2.-]	gi|460411523|ref|XP_004251159.1|//PREDICTED: uncharacterized protein LOC101266299 [Solanum lycopersicum]
Solyc10g008450.1.1	1664	136.860929469814	67.8205085299165	-1.01291714326336	0.0229563779318158	Down	0.00485037691742203	NA	NA	NA	K01889//phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20];K17535//serine/threonine-protein kinase TNNI3K [EC:2.7.11.1];K11649//SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C;K15030//translation initiation factor 3 subunit M	gi|723734131|ref|XP_010327071.1|//PREDICTED: F-box/kelch-repeat protein At3g06240-like [Solanum lycopersicum]
Solyc12g006970.1.1	213	103.882016681875	219.509629991839	1.07933830614504	6.28714812810895e-05	Up	4.50839139660484e-06	NA	NA	NA	NA	NA
Solyc09g007445.1.1	672	223.412424557081	80.5611533212391	-1.47155317778084	1.42560504757116e-09	Down	3.18052593382128e-11	NA	NA	NA	K07252//dolichyldiphosphatase [EC:3.6.1.43]	gi|460402356|ref|XP_004246678.1|//PREDICTED: lipid phosphate phosphatase gamma, chloroplastic [Solanum lycopersicum]
Solyc04g049610.3.1	4183	14.2135808056402	39.0140624520318	1.4567241746533	0.00979246236595382	Up	0.00172197024448714	NA	NA	NA	K10398//kinesin family member 11;K05658//ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:3.6.3.44]	gi|595812876|ref|XP_007203483.1|//hypothetical protein PRUPE_ppa022373mg, partial [Prunus persica]
Solyc09g074350.1.1	510	117.898128428707	31.6926084910185	-1.89532250432764	5.09311691676001e-07	Down	1.94872080675129e-08	NA	NA	NA	NA	gi|565401787|ref|XP_006366376.1|//PREDICTED: transcription initiation factor TFIID subunit 11 [Solanum tuberosum]
Solyc03g116900.3.1	2053	3093.62334243926	906.393678208098	-1.77108785120658	8.50020548210268e-08	Down	2.74705662495342e-09	NA	NA	NA	K03322//manganese transport protein	gi|970019554|ref|XP_015070984.1|//PREDICTED: metal transporter Nramp6 [Solanum pennellii]
Solyc01g112240.3.1	509	47.9908821440947	109.746277735273	1.19333977139958	0.0455712451035587	Up	0.0114528185587574	NA	NA	NA	NA	NA
Solyc06g008265.1.1	3251	1568.61210413337	745.11267425155	-1.0739581298124	0.00680093517395885	Down	0.00111301986481268	NA	NA	NA	K10406//kinesin family member C2/C3;K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|723704210|ref|XP_004240486.2|//PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 isoform X1 [Solanum lycopersicum]
Solyc10g076570.2.1	1724	12.7903074422581	3.11276720761808	-2.03878135077033	0.0306735061501557	Down	0.00690211588728673	NA	NA	NA	K04427//mitogen-activated protein kinase kinase kinase 7 [EC:2.7.11.25];K16573//gamma-tubulin complex component 6	gi|460407256|ref|XP_004249070.1|//PREDICTED: protein trichome birefringence-like 3 [Solanum lycopersicum]
BGI_novel_G000351	2770	327.663784831047	2293.98189400937	2.80756587209703	4.05102908579897e-15	Up	3.26155088171926e-17	NA	NA	NA	NA	gi|460400215|ref|XP_004245631.1|//PREDICTED: uncharacterized protein LOC101265850 [Solanum lycopersicum]
Solyc01g096040.3.1	1446	1680.79624323203	825.727328001829	-1.02540748445771	0.0132074154251113	Down	0.00246111093305403	NA	GO:0004175//endopeptidase activity	GO:0019538//protein metabolic process	K00924;K02882//large subunit ribosomal protein L18Ae;K01381//saccharopepsin [EC:3.4.23.25]	gi|460368269|ref|XP_004229990.1|//PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2-like [Solanum lycopersicum]
Solyc09g064277.1.1	2380	52.9321228618575	148.814426402966	1.49129897125581	6.47057250050408e-06	Up	3.37891445850251e-07	NA	NA	NA	K01601//ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39];K17710//pentatricopeptide repeat domain-containing protein 1;K07478//putative ATPase;K15688//E3 ubiquitin-protein ligase MUL1 [EC:2.3.2.27]	gi|723730221|ref|XP_010326335.1|//PREDICTED: uncharacterized protein LOC101253719 isoform X2 [Solanum lycopersicum]
Solyc05g005320.1.1	480	201.519450575371	78.3302430939529	-1.3632777529894	0.00963060963191384	Down	0.0016891611024824	NA	NA	NA	NA	gi|460385944|ref|XP_004238660.1|//PREDICTED: uncharacterized protein LOC101249820 [Solanum lycopersicum]
Solyc09g009010.3.1	2610	270.838619061152	71.7356925332663	-1.91667044400582	0.00112032615171548	Down	0.000128512958486851	GO:0016021//integral component of membrane	GO:0016740//transferase activity	NA	K13680//beta-mannan synthase [EC:2.4.1.32]	gi|723727990|ref|XP_010325939.1|//PREDICTED: glucomannan 4-beta-mannosyltransferase 9-like isoform X1 [Solanum lycopersicum];gi|460408050|ref|XP_004249461.1|//PREDICTED: glucomannan 4-beta-mannosyltransferase 9 [Solanum lycopersicum]
Solyc10g006480.2.1	1762	28976.9540903435	14135.4787210395	-1.03558521090154	6.83138798835426e-05	Down	4.94234729180031e-06	GO:0043231//intracellular membrane-bounded organelle	NA	NA	K08770//ubiquitin C	gi|944266816|gb|KQL31056.1|//hypothetical protein SETIT_016746mg [Setaria italica]
Solyc08g079900.3.1	2247	3463.75183133976	1257.47310081412	-1.46180802947509	0.00026722886123265	Down	2.39782104604917e-05	NA	GO:0004175//endopeptidase activity;GO:0005515//protein binding	GO:0044092//negative regulation of molecular function;GO:0019538//protein metabolic process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13199//plasminogen activator inhibitor 1 RNA-binding protein	gi|723724639|ref|XP_004245675.2|//PREDICTED: subtilisin-like protease [Solanum lycopersicum]
Solyc03g007995.1.1	1070	1768.56023609107	3.22851340334445	-9.09748962533491	1.12738872299863e-84	Down	2.54489553724295e-88	NA	NA	NA	NA	gi|460376884|ref|XP_004234226.1|//PREDICTED: uncharacterized protein LOC101266602 [Solanum lycopersicum]
Solyc10g049890.2.1	2235	143.605744821084	40.6561474488933	-1.82056804616501	1.82204881205849e-05	Down	1.09130989796731e-06	NA	GO:0016616//oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;GO:0000166//nucleotide binding;GO:0031406//carboxylic acid binding	GO:0006563//L-serine metabolic process	K00058//D-3-phosphoglycerate dehydrogenase [EC:1.1.1.95]	gi|460406623|ref|XP_004248761.1|//PREDICTED: D-3-phosphoglycerate dehydrogenase 1, chloroplastic-like [Solanum lycopersicum]
Solyc08g079700.2.1	807	7691.46224118888	2418.93665382562	-1.66888490918679	1.68460269891449e-18	Down	9.31665149512526e-21	NA	NA	NA	NA	gi|723724710|ref|XP_010325448.1|//PREDICTED: zinc finger A20 and AN1 domain-containing stress-associated protein 1 [Solanum lycopersicum]
Solyc04g057880.3.1	5221	1725.125546104	610.595664476744	-1.49841210705609	2.22187903960388e-12	Down	2.90900641754007e-14	GO:0005634//nucleus	GO:0008270//zinc ion binding;GO:0018024//histone-lysine N-methyltransferase activity	GO:0034968//histone lysine methylation	K11423//histone-lysine N-methyltransferase SETD2 [EC:2.1.1.43]	gi|723691854|ref|XP_010319721.1|//PREDICTED: histone-lysine N-methyltransferase ASHH2-like [Solanum lycopersicum]
Solyc04g074640.3.1	1589	1283.9073512503	563.879664274407	-1.18708187937368	0.00051525007902015	Down	5.16607020537509e-05	GO:0009543//chloroplast thylakoid lumen;GO:0009534//chloroplast thylakoid	GO:0016209//antioxidant activity;GO:0020037//heme binding;GO:0005506//iron ion binding;GO:0004601//peroxidase activity	GO:0006979//response to oxidative stress;GO:0008152//metabolic process;GO:0098869//cellular oxidant detoxification;GO:0006950//response to stress;GO:0055114//oxidation-reduction process	K00434//L-ascorbate peroxidase [EC:1.11.1.11]	gi|460384486|ref|XP_004237942.1|//PREDICTED: thylakoid lumenal 29 kDa protein, chloroplastic [Solanum lycopersicum]
Solyc01g009480.3.1	1881	25.5837240469527	56.0859285731127	1.13241257503514	0.0207563745027414	Up	0.00428637094227041	NA	NA	NA	NA	gi|460365126|ref|XP_004228455.1|//PREDICTED: uncharacterized protein LOC101246557 [Solanum lycopersicum]
Solyc08g016150.1.1	279	233.142672675701	109.365429745769	-1.09205631227597	0.000687232595270319	Down	7.22137720174395e-05	NA	NA	NA	NA	gi|12003398|gb|AAG43556.1|AF211538_1//Avr9/Cf-9 rapidly elicited protein 180 [Nicotiana tabacum]
Solyc11g069800.1.1	1533	4119.34690554626	1565.26198245928	-1.39601148060437	1.57100217660405e-09	Down	3.52263843963887e-11	NA	GO:0016836//hydro-lyase activity;GO:0005506//iron ion binding;GO:0016491//oxidoreductase activity	NA	K01723//hydroperoxide dehydratase [EC:4.2.1.92]	gi|567757535|ref|NP_001274707.1|//allene oxide synthase 2 [Solanum lycopersicum]
Solyc03g112760.3.1	3864	173.196300546819	357.937305193731	1.04729879857569	0.00495172153831133	Up	0.000759897372263803	NA	NA	NA	NA	gi|460380963|ref|XP_004236222.1|//PREDICTED: uncharacterized protein LOC101255285 isoform X1 [Solanum lycopersicum]
Solyc07g045190.2.1	970	2041.78340031552	5971.66943367678	1.54830447811271	2.701262977762e-15	Up	2.11657414829086e-17	NA	NA	NA	K16285//RING/U-box domain-containing protein [EC:2.3.2.27]	gi|460396051|ref|XP_004243593.1|//PREDICTED: probable E3 ubiquitin-protein ligase XERICO isoform X1 [Solanum lycopersicum]
Solyc04g015140.2.1	877	45.5283884117708	21.7051868847984	-1.06872654809786	0.0288583059192044	Down	0.00640789020072026	NA	NA	NA	NA	NA
Solyc02g062230.1.1	291	9.51016694431025	35.6190890775205	1.90510804951227	0.00647598252341397	Up	0.0010520426085817	NA	NA	NA	K14488//SAUR family protein	gi|460375521|ref|XP_004233554.1|//PREDICTED: auxin-induced protein 15A [Solanum lycopersicum]
Solyc12g010980.2.1	1417	3762.74680785561	605.66506613429	-2.63519410852106	9.18365671689074e-09	Down	2.44621104422823e-10	NA	NA	NA	K13065//shikimate O-hydroxycinnamoyltransferase [EC:2.3.1.133]	gi|460412853|ref|XP_004251812.1|//PREDICTED: acetyl-CoA-benzylalcohol acetyltransferase [Solanum lycopersicum]
Solyc12g096580.2.1	3075	857.024309732857	361.721660200943	-1.24445613697664	3.75700010817953e-11	Down	6.13445465368666e-13	NA	NA	NA	K03549//KUP system potassium uptake protein	gi|697145256|ref|XP_009626757.1|//PREDICTED: potassium transporter 4-like [Nicotiana tomentosiformis];gi|460415397|ref|XP_004253045.1|//PREDICTED: potassium transporter 4-like [Solanum lycopersicum]
Solyc09g061280.3.1	1644	2007.22331447453	871.629344227888	-1.20341446119396	0.00049737055202738	Down	4.95873575196598e-05	NA	NA	NA	K06624	gi|806638663|ref|NP_001233984.2|//p27KIP1-related-protein 2 [Solanum lycopersicum]
Solyc01g110030.3.1	2640	1107.40388442568	515.741968686292	-1.10246013226251	8.15342240862289e-06	Down	4.42947402485006e-07	NA	NA	NA	K14963//COMPASS component SWD3	gi|460370092|ref|XP_004230888.1|//PREDICTED: WD repeat-containing protein 13 [Solanum lycopersicum];gi|970001754|ref|XP_015059277.1|//PREDICTED: WD repeat-containing protein 13 [Solanum pennellii]
Solyc09g011150.1.1	177	2.73698591519766	11.103079507162	2.02029995680737	0.0362350620873051	Up	0.00855436473280057	GO:0009536//plastid	NA	NA	NA	gi|108802688|ref|YP_636345.1|//hypothetical protein EuglglCp070 (chloroplast) [Eucalyptus globulus subsp. globulus]
Solyc01g110640.2.1	1537	29.0778879901353	85.8919995681513	1.56260127141935	0.00546910977773761	Up	0.000855757244755859	NA	NA	NA	K08739//DNA mismatch repair protein MLH3	gi|971539165|ref|XP_015160674.1|//PREDICTED: DNA mismatch repair protein MLH3 isoform X9 [Solanum tuberosum];gi|971539159|ref|XP_015160667.1|//PREDICTED: DNA mismatch repair protein MLH3 isoform X7 [Solanum tuberosum]
Solyc06g064560.3.1	1281	10.3007440695558	31.035203506362	1.59115705250646	0.00841678769353737	Up	0.00143731374495734	NA	NA	NA	NA	gi|723709871|ref|XP_010322789.1|//PREDICTED: uncharacterized protein LOC101260831 isoform X1 [Solanum lycopersicum];gi|460393320|ref|XP_004242258.1|//PREDICTED: uncharacterized protein LOC101260831 isoform X3 [Solanum lycopersicum];gi|970034760|ref|XP_015078707.1|//PREDICTED: uncharacterized protein LOC107022624 isoform X2 [Solanum pennellii]
Solyc10g008350.3.1	572	10226.4970310649	28276.7354743629	1.46730352070741	2.98465459367107e-06	Up	1.40474149611833e-07	NA	NA	NA	NA	NA
Solyc07g056250.3.1	1397	377.798189754682	826.453197050128	1.12931733145741	0.00111035826064142	Up	0.000127077119220135	NA	NA	NA	NA	gi|460395276|ref|XP_004243210.1|//PREDICTED: GDSL esterase/lipase At4g10955-like [Solanum lycopersicum]
Solyc06g084100.3.1	867	1.92052253358736	8.19840176923162	2.09384380094706	0.0341318395941028	Up	0.00793456120586762	NA	GO:0003824//catalytic activity	NA	K17505//protein phosphatase 1K [EC:3.1.3.16]	gi|723711858|ref|XP_010323139.1|//PREDICTED: probable protein phosphatase 2C 51 [Solanum lycopersicum]
Solyc03g118000.1.1	1301	1893.15121547253	469.406148609828	-2.01188100639958	8.74573462613173e-11	Down	1.53988104026699e-12	NA	GO:0051766//inositol trisphosphate kinase activity	GO:0006796//phosphate-containing compound metabolic process	K00915//inositol-polyphosphate multikinase [EC:2.7.1.140 2.7.1.151]	gi|460380235|ref|XP_004235863.1|//PREDICTED: inositol polyphosphate multikinase beta [Solanum lycopersicum]
Solyc10g047060.2.1	1729	4.20459466640416	1.02024922395642	-2.04304511449756	0.0441171012285793	Down	0.0109792779124591	NA	NA	NA	K12581//CCR4-NOT transcription complex subunit 7/8;K13126//polyadenylate-binding protein;K01054//acylglycerol lipase [EC:3.1.1.23]	gi|723736836|ref|XP_004248807.2|//PREDICTED: NAC transcription factor 25-like [Solanum lycopersicum]
Solyc12g042590.2.1	1236	11.4573903116802	65.4287837331314	2.51364697843159	5.36268542158755e-05	Up	3.76679220545672e-06	NA	NA	NA	K13424//WRKY transcription factor 33;K18834//WRKY transcription factor 1	gi|723750770|ref|XP_010314251.1|//PREDICTED: probable WRKY transcription factor 40 [Solanum lycopersicum]
BGI_novel_G000261	4383	495.760532423097	1.90656543529528	-8.02252356588528	2.00098850161074e-37	Down	2.10788856452599e-40	NA	NA	NA	K07466//replication factor A1;K02261//cytochrome c oxidase subunit 2	gi|969998798|ref|XP_015077441.1|//PREDICTED: uncharacterized protein LOC107021314 [Solanum pennellii]
Solyc12g006050.2.1	2929	87.6811845990851	23.1092987006086	-1.92379381076297	0.00738544841629866	Down	0.00123063021203111	NA	NA	NA	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460412291|ref|XP_004251535.1|//PREDICTED: protein NRT1/ PTR FAMILY 6.4 [Solanum lycopersicum]
Solyc09g091160.1.1	439	20.9858629342709	173.188538972229	3.04485376770547	7.43542629058749e-05	Up	5.45208647116441e-06	NA	NA	NA	NA	gi|723732731|ref|XP_010326805.1|//PREDICTED: uncharacterized protein LOC101250340 isoform X2 [Solanum lycopersicum]
Solyc09g065290.3.1	3710	1197.55877748745	41.9343792801825	-4.83581915531096	1.7429765599865e-08	Down	4.90499046978894e-10	NA	NA	NA	K12817//pre-mRNA-splicing factor 18;K11654//SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5 [EC:3.6.4.-];K14963//COMPASS component SWD3	gi|723730447|ref|XP_010326380.1|//PREDICTED: uncharacterized protein LOC101258483 isoform X1 [Solanum lycopersicum];gi|970053670|ref|XP_015088466.1|//PREDICTED: pre-mRNA-splicing factor 18 [Solanum pennellii]
Solyc01g080070.3.1	2418	379.11580875212	109.272380028898	-1.79470982897528	0.00314467555362039	Down	0.000441650633621705	NA	NA	NA	K10878//meiotic recombination protein SPO11;K07213//copper chaperone;K02184//formin 2	gi|460367150|ref|XP_004229438.1|//PREDICTED: neurogenic protein mastermind-like [Solanum lycopersicum];gi|970002569|ref|XP_015062034.1|//PREDICTED: mediator of RNA polymerase II transcription subunit 15 [Solanum pennellii]
Solyc10g008400.1.1	1107	794.076231822501	364.516514062299	-1.12329333774349	0.00442367610666956	Down	0.000664050702242721	GO:0031090//organelle membrane	GO:0019787//ubiquitin-like protein transferase activity	GO:0006511//ubiquitin-dependent protein catabolic process;GO:0006950//response to stress;GO:0032446//protein modification by small protein conjugation;GO:0009725//response to hormone	K10666//E3 ubiquitin-protein ligase RNF5 [EC:2.3.2.27]	gi|460405395|ref|XP_004248161.1|//PREDICTED: E3 ubiquitin-protein ligase RMA1H1 [Solanum lycopersicum]
Solyc10g078440.1.1	426	262.476848534808	124.227438527053	-1.07920631555097	0.00324846035423126	Down	0.000458915298349826	NA	NA	NA	NA	gi|460407391|ref|XP_004249136.1|//PREDICTED: uncharacterized protein LOC101268236 [Solanum lycopersicum]
Solyc04g078590.3.1	3474	56.3024350517498	13.3620034743264	-2.07506098040093	0.0118349836102204	Down	0.00215861552078061	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723696624|ref|XP_004238131.2|//PREDICTED: probable inactive receptor kinase At5g67200 [Solanum lycopersicum]
Solyc02g092790.3.1	3766	2161.9387423476	4512.18566761596	1.06150078756144	8.06205047640073e-10	Up	1.72584902974869e-11	GO:0044464//cell part	NA	GO:0051234//establishment of localization	K12347//natural resistance-associated macrophage protein	gi|697124709|ref|XP_009616361.1|//PREDICTED: metal transporter Nramp3-like [Nicotiana tomentosiformis];gi|350535300|ref|NP_001234443.1|//Arabinogalactan 1 precursor [Solanum lycopersicum]
Solyc07g007150.1.1	417	37.9098371914759	107.334728932977	1.50147278031115	0.00215222498613245	Up	0.000279756859559353	NA	NA	NA	NA	gi|723713982|ref|XP_010323473.1|//PREDICTED: uncharacterized protein LOC104648246 [Solanum lycopersicum]
Solyc10g074720.2.1	1197	245.945131262642	61.9139039055864	-1.99000116107328	0.000670305084542137	Down	7.02332453141404e-05	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process	K07760//cyclin-dependent kinase [EC:2.7.11.22]	gi|350534706|ref|NP_001233899.1|//B1-type cyclin dependent kinase [Solanum lycopersicum]
Solyc12g005850.2.1	2082	1533.66715247123	592.464689896095	-1.37218433371944	1.03168516300773e-07	Down	3.3768475990095e-09	NA	NA	NA	K03327//multidrug resistance protein, MATE family	gi|460412251|ref|XP_004251515.1|//PREDICTED: protein TRANSPARENT TESTA 12 [Solanum lycopersicum]
Solyc05g052030.1.1	606	442.001949493102	1739.30073082276	1.97638276304265	6.73175649211095e-13	Up	8.18042643698961e-15	GO:0043231//intracellular membrane-bounded organelle	GO:0001071//nucleic acid binding transcription factor activity;GO:0003676//nucleic acid binding	GO:0006351//transcription, DNA-templated	K09286//EREBP-like factor	gi|350537843|ref|NP_001234313.1|//ethylene response factor 4 [Solanum lycopersicum]
Solyc04g072840.3.1	2033	4.98276434647828	1.12307925690148	-2.14948660134261	0.0328213585365704	Down	0.00754100965322933	NA	NA	NA	K10706//senataxin [EC:3.6.4.-]	gi|723694231|ref|XP_010320158.1|//PREDICTED: probable helicase senataxin isoform X2 [Solanum lycopersicum]
Solyc03g025450.3.1	2455	2843.31692158991	6701.02507129917	1.23680689129751	0.000146761143492706	Up	1.19264134666759e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|723679711|ref|XP_010317616.1|//PREDICTED: U-box domain-containing protein 32 isoform X1 [Solanum lycopersicum];gi|723679714|ref|XP_010317617.1|//PREDICTED: U-box domain-containing protein 32 isoform X2 [Solanum lycopersicum]
Solyc06g062420.3.1	538	552.9245373934	1696.69504080796	1.617572780852	3.69914779492561e-15	Up	2.95041133380071e-17	NA	NA	NA	NA	NA
Solyc05g051990.3.1	1676	1750.956228579	751.399519742756	-1.22049091989989	8.85711578678448e-09	Down	2.35256724810754e-10	NA	NA	NA	K13095//splicing factor 1	gi|460388666|ref|XP_004239987.1|//PREDICTED: leucine-rich repeat extensin-like protein 5 [Solanum lycopersicum];gi|970029740|ref|XP_015076183.1|//PREDICTED: branchpoint-bridging protein-like [Solanum pennellii]
Solyc12g056410.2.1	1491	3331.88938148626	1303.86945935056	-1.35354106688944	1.20774551150881e-11	Down	1.80389378506019e-13	NA	NA	NA	K08235//xyloglucan:xyloglucosyl transferase [EC:2.4.1.207]	gi|460414467|ref|XP_004252592.1|//PREDICTED: F-box protein PP2-A13-like [Solanum lycopersicum]
Solyc05g016690.3.1	1313	1905.2778635814	287.275174649918	-2.72949618354693	1.33543994985337e-14	Down	1.18069371036698e-16	NA	NA	NA	NA	gi|723699594|ref|XP_010321046.1|//PREDICTED: nudix hydrolase 2-like isoform X2 [Solanum lycopersicum];gi|460387161|ref|XP_004239256.1|//PREDICTED: nudix hydrolase 2-like isoform X1 [Solanum lycopersicum];gi|723699597|ref|XP_010321047.1|//PREDICTED: nudix hydrolase 2-like isoform X3 [Solanum lycopersicum]
Solyc03g098760.2.1	609	543.923724963192	130.944945179082	-2.05444398598593	0.0392480635943969	Down	0.00946796778657913	NA	GO:0030414//peptidase inhibitor activity	NA	NA	gi|460379328|ref|XP_004235415.1|//PREDICTED: serine protease inhibitor 5-like [Solanum lycopersicum]
Solyc09g015020.1.1	465	14.9780391270882	3.34693177319171	-2.16193771626089	0.0199872087638904	Down	0.0040876774582584	NA	NA	GO:0050896//response to stimulus	K13993//HSP20 family protein	gi|460401597|ref|XP_004246305.1|//PREDICTED: 17.3 kDa class I heat shock protein-like [Solanum lycopersicum]
Solyc07g063850.3.1	2272	177.489857503332	33.4285009148782	-2.40858602092519	0.0044577426166135	Down	0.000670506206968426	NA	NA	NA	K14487//auxin responsive GH3 gene family	gi|460397224|ref|XP_004244168.1|//PREDICTED: indole-3-acetic acid-amido synthetase GH3.6 [Solanum lycopersicum]
Solyc06g072670.3.1	1212	174.957246298992	541.82445810775	1.63082309997113	0.000127904448096195	Up	1.01919345774169e-05	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K11165//dehydrogenase/reductase SDR family member 7 [EC:1.1.-.-]	gi|460391684|ref|XP_004241449.1|//PREDICTED: 11-beta-hydroxysteroid dehydrogenase 1B-like [Solanum lycopersicum]
Solyc06g082520.3.1	3139	2352.24954611051	846.217734934891	-1.47494029436805	6.93068877232921e-23	Down	2.13813573864182e-25	GO:0005634//nucleus;GO:0005739//mitochondrion	GO:0003677//DNA binding;GO:0008270//zinc ion binding	GO:0045892//negative regulation of transcription, DNA-templated	K09287//RAV-like factor	gi|460393767|ref|XP_004242480.1|//PREDICTED: B3 domain-containing transcription repressor VAL1-like [Solanum lycopersicum]
Solyc04g071030.1.1	1284	5470.26165442946	2194.72572627438	-1.31756918370709	1.22993974983787e-15	Down	9.20835252888397e-18	NA	NA	NA	K10260//F-box and WD-40 domain protein 7;K08332//vacuolar protein 8	gi|460384132|ref|XP_004237768.1|//PREDICTED: U-box domain-containing protein 28-like [Solanum lycopersicum]
Solyc06g075680.1.1	582	24.1599169482874	73.8082274984036	1.61116614904038	0.0068471665442562	Up	0.00112290440054224	NA	NA	NA	NA	gi|970001921|ref|XP_015060073.1|//PREDICTED: uncharacterized protein LOC107005912 isoform X4 [Solanum pennellii]
Solyc01g066270.3.1	547	30.4486418531601	9.39492701760089	-1.69642401931086	0.014980367664632	Down	0.00286926455156665	NA	NA	NA	NA	NA
Solyc11g017240.2.1	897	438.999781676676	915.485383389274	1.06031662990315	6.51353406564317e-09	Up	1.67861957673648e-10	NA	NA	NA	K01850//chorismate mutase [EC:5.4.99.5]	gi|921273957|ref|NP_001234708.2|//chorimate mutase [Solanum lycopersicum];gi|723740299|ref|XP_010312446.1|//PREDICTED: chorimate mutase isoform X1 [Solanum lycopersicum]
Solyc03g006550.3.1	2715	2559.19984281113	838.884540703335	-1.60914864385267	3.46932566634913e-08	Down	1.03374940848326e-09	NA	NA	NA	K17982//geranyllinalool synthase [EC:4.2.3.144]	gi|726965355|ref|NP_001289840.1|//(E,E)-geranyllinalool synthase [Solanum lycopersicum]
Solyc08g075950.2.1	2310	130.466002905676	37.5460042455649	-1.79694263014326	0.000359340801951389	Down	3.39467552182069e-05	NA	NA	NA	K15601//lysine-specific demethylase 3 [EC:1.14.11.-]	gi|723725807|ref|XP_004246199.2|//PREDICTED: growth-regulating factor 4-like [Solanum lycopersicum]
Solyc07g043560.3.1	3594	5400.89611985	1211.61970904068	-2.1562618486356	8.86035511430426e-22	Down	3.10012424992587e-24	NA	GO:0000166//nucleotide binding;GO:0016491//oxidoreductase activity	NA	K09486//hypoxia up-regulated 1	gi|460396133|ref|XP_004243633.1|//PREDICTED: heat shock 70 kDa protein 17 [Solanum lycopersicum]
Solyc01g087830.1.1	2631	2894.71631739836	1007.63584171678	-1.52244762590984	0.000307842339697062	Down	2.82594171881426e-05	GO:0005618//cell wall	GO:0004175//endopeptidase activity;GO:0004252//serine-type endopeptidase activity;GO:0005515//protein binding	GO:0044092//negative regulation of molecular function;GO:0006508//proteolysis;GO:0019538//protein metabolic process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13199//plasminogen activator inhibitor 1 RNA-binding protein;K12663//Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase [EC:5.3.3.-];K01183//chitinase [EC:3.2.1.14]	gi|565357132|ref|XP_006345402.1|//PREDICTED: subtilisin-like protease SBT1.7 [Solanum tuberosum];gi|350536739|ref|NP_001234774.1|//subtilisin-like protease precursor [Solanum lycopersicum]
Solyc01g111270.3.1	2391	5.61713772098371	1.37563281683773	-2.02973973729804	0.0453154756179201	Down	0.0113663760701532	NA	NA	NA	K14856//protein SDA1;K00276//primary-amine oxidase [EC:1.4.3.21]	gi|460370349|ref|XP_004231015.1|//PREDICTED: uncharacterized protein LOC101259003 [Solanum lycopersicum]
Solyc04g011767.1.1	455	426.224391578254	1484.10980903022	1.79991277884327	4.24007959055866e-22	Up	1.40378857776208e-24	NA	NA	NA	NA	gi|460381990|ref|XP_004236723.1|//PREDICTED: uncharacterized protein LOC101253579 [Solanum lycopersicum]
Solyc08g078870.2.1	327	1498.02975525504	3644.94037492176	1.28282893446018	0.00988567633142665	Up	0.0017420808102484	NA	NA	NA	K02883//large subunit ribosomal protein L18e;K11855//ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12]	gi|460400459|ref|XP_004245752.1|//PREDICTED: 14 kDa proline-rich protein DC2.15-like [Solanum lycopersicum]
Solyc08g081550.3.1	842	6.41934949989547	30.7103133496493	2.25822421736913	0.000948322689659208	Up	0.000105678397545921	NA	GO:0016846//carbon-sulfur lyase activity;GO:0048037//cofactor binding;GO:0016740//transferase activity	GO:0008652//cellular amino acid biosynthetic process	K20772	gi|806638517|ref|NP_001233922.2|//1-aminocyclopropane-1-carboxylate synthase [Solanum lycopersicum]
Solyc04g077400.4.1	1397	9.80215251884166	30.6618447335769	1.64527399766693	0.0189906297271827	Up	0.00384385206667582	NA	NA	NA	K15601//lysine-specific demethylase 3 [EC:1.14.11.-]	gi|723695010|ref|XP_010320285.1|//PREDICTED: CSC1-like protein RXW8 [Solanum lycopersicum]
BGI_novel_G000295	5729	725.774846067966	1525.94813614011	1.07211196693136	3.24004766532998e-06	Up	1.52981934536837e-07	NA	NA	NA	NA	gi|969998710|ref|XP_015076340.1|//PREDICTED: uncharacterized protein LOC107020473 [Solanum pennellii]
Solyc05g009230.2.1	1073	93.913662779316	31.0618918065706	-1.59618936088798	0.00228837747158603	Down	0.000300542148315946	NA	NA	NA	K09422//myb proto-oncogene protein, plant	gi|723697903|ref|XP_004239413.2|//PREDICTED: transcription factor MYB108 [Solanum lycopersicum]
Solyc05g055870.3.1	1522	923.644514041443	2458.62710941502	1.41244333446108	1.69945443472863e-07	Up	5.83108519365129e-09	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K16219//protein N-terminal methyltransferase [EC:2.1.1.244];K08235//xyloglucan:xyloglucosyl transferase [EC:2.4.1.207]	gi|460388055|ref|XP_004239687.1|//PREDICTED: putative F-box protein PP2-B12 [Solanum lycopersicum]
Solyc02g083760.3.1	1048	464.73119394527	202.06193506089	-1.20159891670871	0.00185975690137989	Down	0.000234673613514979	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460373380|ref|XP_004232498.1|//PREDICTED: pathogenesis-related protein 5 [Solanum lycopersicum]
Solyc04g081590.3.1	3379	618.346480833426	1404.07643472651	1.18313411327601	6.02815876402609e-09	Up	1.54219261081179e-10	GO:0016020//membrane	GO:0004672//protein kinase activity	NA	K00924	gi|460385356|ref|XP_004238370.1|//PREDICTED: receptor protein kinase CLAVATA1 [Solanum lycopersicum]
Solyc05g024370.1.1	672	3.60195502538278	13.4124052850215	1.8967159103381	0.0461714812609144	Up	0.0116384094976722	NA	NA	NA	K03283//heat shock 70kDa protein 1/8;K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|697101767|ref|XP_009597713.1|//PREDICTED: TMV resistance protein N-like isoform X2 [Nicotiana tomentosiformis]
Solyc08g082900.3.1	3380	385.913955879886	185.002553969028	-1.06073402992559	0.000491508662421315	Down	4.88919828232489e-05	NA	NA	NA	K20241//WD repeat-containing protein 44	gi|460399902|ref|XP_004245475.1|//PREDICTED: uncharacterized protein LOC101244103 [Solanum lycopersicum]
Solyc01g094410.3.1	3555	3771.51219230748	1815.67176604522	-1.05463967146273	0.000227225948093955	Down	1.98844076473491e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K18999//RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16]	gi|460368063|ref|XP_004229889.1|//PREDICTED: multiple C2 and transmembrane domain-containing protein 2-like [Solanum lycopersicum]
Solyc07g066360.1.1	246	2.35543621872201	9.27235797492527	1.97694199831729	0.0344938779228433	Up	0.00805246472954262	NA	NA	NA	NA	gi|698486618|ref|XP_009790029.1|//PREDICTED: pre-mRNA polyadenylation factor FIP1-like [Nicotiana sylvestris]
Solyc05g007470.3.1	1491	814.595489781134	1796.49427058031	1.14102860265073	0.000998232608589088	Up	0.000112066444846871	NA	GO:0000166//nucleotide binding	NA	K08900//mitochondrial chaperone BCS1	gi|113205197|gb|AAT39939.2|//ATPase protein, putative [Solanum demissum];gi|970030648|ref|XP_015076609.1|//PREDICTED: LOW QUALITY PROTEIN: AAA-ATPase At3g28580-like [Solanum pennellii]
Solyc11g064840.1.1	1170	49.0188275192207	9.84349503027933	-2.31609342202898	0.00166381118162482	Down	0.000205128263438094	NA	NA	NA	NA	gi|460410977|ref|XP_004250891.1|//PREDICTED: uncharacterized protein LOC101260399 [Solanum lycopersicum]
Solyc05g050330.3.1	893	53.3021729805166	1.44462111154276	-5.20543128467145	7.41994897686666e-12	Down	1.07474806474555e-13	NA	NA	NA	K18835//WRKY transcription factor 2;K13425//WRKY transcription factor 22	gi|723703254|ref|XP_010321619.1|//PREDICTED: probable WRKY transcription factor 41 [Solanum lycopersicum]
Solyc02g070990.1.1	839	379.697938912401	32.6315383583751	-3.54051326014873	1.36420377597177e-07	Down	4.59867036595450e-09	GO:0009521//photosystem;GO:0010287//plastoglobule;GO:0009535//chloroplast thylakoid membrane;GO:0009523//photosystem II;GO:0009534//chloroplast thylakoid;GO:0031224//intrinsic component of membrane;GO:0016021//integral component of membrane;GO:0009941//chloroplast envelope;GO:0009522//photosystem I	GO:0043169//cation binding;GO:0031409//pigment binding;GO:0046872//metal ion binding;GO:0046906//tetrapyrrole binding;GO:0016168//chlorophyll binding	GO:0009768//photosynthesis, light harvesting in photosystem I;GO:0006464//cellular protein modification process;GO:0006091//generation of precursor metabolites and energy;GO:0009416//response to light stimulus;GO:0018298//protein-chromophore linkage	K08912//light-harvesting complex II chlorophyll a/b binding protein 1	gi|460374606|ref|XP_004233101.1|//PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like [Solanum lycopersicum]
Solyc04g005380.3.1	1707	171.165302624084	421.948953572038	1.30167819670333	8.88042860767027e-06	Up	4.8712057599636e-07	NA	NA	NA	K05747//Wiskott-Aldrich syndrome protein	gi|460382999|ref|XP_004237223.1|//PREDICTED: ninja-family protein AFP3 isoform X1 [Solanum lycopersicum]
Solyc03g111170.3.1	2202	12096.0753390428	4235.20718876621	-1.51403457649731	5.39571331132053e-14	Down	5.19677429532753e-16	NA	GO:0016703//oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)	GO:0008152//metabolic process	K10526//OPC-8:0 CoA ligase 1 [EC:6.2.1.-]	gi|460381204|ref|XP_004236342.1|//PREDICTED: 4-coumarate--CoA ligase-like 9 [Solanum lycopersicum]
Solyc04g016440.3.1	1578	105.867513050435	39.3040792460262	-1.42950898766397	0.000318578172547015	Down	2.94045628613512e-05	NA	NA	NA	NA	gi|971569705|ref|XP_015169220.1|//PREDICTED: protein FATTY ACID EXPORT 1, chloroplastic [Solanum tuberosum]
Solyc09g072700.3.1	976	26.6277227320644	6.01960181877519	-2.14518908634174	0.0150063263693908	Down	0.00287536569598598	NA	GO:0016209//antioxidant activity;GO:0005506//iron ion binding;GO:0003824//catalytic activity	GO:0008152//metabolic process;GO:0006950//response to stress	K00430//peroxidase [EC:1.11.1.7]	gi|460404067|ref|XP_004247506.1|//PREDICTED: peroxidase 44-like [Solanum lycopersicum]
Solyc12g056540.1.1	938	477.978020027714	105.275841134874	-2.18276987451327	0.0269822618639786	Down	0.00591180160268157	GO:0043231//intracellular membrane-bounded organelle;GO:0005634//nucleus;GO:0000785//chromatin;GO:0000786//nucleosome	GO:0003677//DNA binding;GO:0046982//protein heterodimerization activity;GO:0003676//nucleic acid binding	GO:0034728//nucleosome organization	K11253//histone H3	gi|901800372|gb|KMZ60580.1|//histone H3 [Zostera marina];gi|357502337|ref|XP_003621457.1|//core histone H2A/H2B/H3/H4 [Medicago truncatula]
Solyc01g091380.3.1	5837	322.846939682714	145.063702723046	-1.15416377261243	0.0015805139986998	Down	0.000192777516319968	NA	NA	NA	K16732//protein regulator of cytokinesis 1	gi|723660691|ref|XP_010325774.1|//PREDICTED: 65-kDa microtubule-associated protein 3-like isoform X4 [Solanum lycopersicum];gi|723660685|ref|XP_010325766.1|//PREDICTED: 65-kDa microtubule-associated protein 3-like isoform X2 [Solanum lycopersicum]
Solyc01g087590.3.1	2135	1566.16483040635	6420.29553217283	2.03540365097417	5.94166495934521e-10	Up	1.23617032449883e-11	NA	GO:0016647//oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor	GO:0008152//metabolic process	K13366//polyamine oxidase [EC:1.5.3.14 1.5.3.16 1.5.3.-]	gi|460367580|ref|XP_004229651.1|//PREDICTED: polyamine oxidase 1 [Solanum lycopersicum]
Solyc09g014990.3.1	1517	6332.81317194587	2128.30130971837	-1.5731441064657	1.90892162913179e-13	Down	2.03840786394449e-15	NA	NA	NA	K10268//F-box and leucine-rich repeat protein 2/20;K13424//WRKY transcription factor 33	gi|460401603|ref|XP_004246308.1|//PREDICTED: probable WRKY transcription factor 26 [Solanum lycopersicum]
Solyc07g007230.3.1	1384	831.602473201337	335.420932090939	-1.30992132507394	8.92829377692035e-08	Down	2.89884030454562e-09	NA	NA	NA	K09518//DnaJ homolog subfamily B member 12;K09510//DnaJ homolog subfamily B member 4;K09511	gi|970042609|ref|XP_015082697.1|//PREDICTED: uncharacterized protein LOC107026304 [Solanum pennellii]
Solyc03g025600.3.1	1551	515.935766900773	64.1198047273189	-3.00834952684471	5.17292067070066e-46	Down	3.11387248800642e-49	NA	NA	NA	K01280//tripeptidyl-peptidase II [EC:3.4.14.10];K19882//O-palmitoleoyl-L-serine hydrolase [EC:3.1.1.98]	gi|460377239|ref|XP_004234401.1|//PREDICTED: uncharacterized protein LOC101253061 [Solanum lycopersicum]
BGI_novel_G000493	679	58.5242237726912	139.647101303445	1.25467982787074	2.14292127323029e-05	Up	1.32058128124575e-06	GO:0009507//chloroplast	GO:0003899//DNA-directed RNA polymerase activity;GO:0003677//DNA binding;GO:0046983//protein dimerization activity	GO:0006351//transcription, DNA-templated	K03040//DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]	gi|813424298|ref|YP_009132076.1|//RNA polymerase alpha subunit (chloroplast) [Solanum neorickii]
Solyc01g095090.3.1	1194	78.8216798922931	28.3845144128177	-1.47348843637325	0.000215364213473879	Down	1.86600370064087e-05	NA	NA	NA	K11985//TRAF-interacting protein [EC:2.3.2.27]	gi|723661310|ref|XP_010326668.1|//PREDICTED: uncharacterized protein LOC101255628 isoform X2 [Solanum lycopersicum];gi|723661313|ref|XP_010326669.1|//PREDICTED: uncharacterized protein LOC101255628 isoform X3 [Solanum lycopersicum]
Solyc02g032660.3.1	1828	156.093975037999	323.557161939273	1.05160575881917	0.00194825400377837	Up	0.000248552645854494	GO:0044464//cell part	GO:0015291//secondary active transmembrane transporter activity	GO:0015893//drug transport	K03327//multidrug resistance protein, MATE family	gi|460371569|ref|XP_004231608.1|//PREDICTED: protein TRANSPARENT TESTA 12-like [Solanum lycopersicum]
Solyc05g052010.2.1	642	613.037984728882	120.368879033738	-2.34851403178837	0.000126826194648241	Down	1.00821576106747e-05	NA	NA	NA	K13095//splicing factor 1	gi|723702156|ref|XP_010321459.1|//PREDICTED: splicing factor 3B subunit 4-like [Solanum lycopersicum]
Solyc09g074240.1.1	1917	648.865383730656	202.79980887677	-1.67786290913475	2.54010709735233e-12	Down	3.37343041898184e-14	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460404016|ref|XP_004247481.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase RKF3 [Solanum lycopersicum]
Solyc02g081290.3.1	2422	1647.02835738562	800.163825819815	-1.04149808135642	3.85511063004249e-06	Down	1.87679200725169e-07	NA	NA	NA	K12858//ATP-dependent RNA helicase DDX23/PRP28 [EC:3.6.4.13]	gi|460373742|ref|XP_004232673.1|//PREDICTED: DEAD-box ATP-dependent RNA helicase 21 [Solanum lycopersicum]
BGI_novel_G000480	2301	15.68974563366	65.5692207712406	2.06319678674597	0.000214420305875956	Up	1.8570186009272e-05	NA	NA	NA	NA	gi|970068641|ref|XP_015061455.1|//PREDICTED: synaptotagmin-5-like [Solanum pennellii]
BGI_novel_G000125	5177	31.6471996511741	95.4807903788441	1.59313266261335	0.000232453907229946	Up	2.041217265789e-05	NA	NA	NA	NA	gi|970014769|ref|XP_015068383.1|//PREDICTED: uncharacterized protein LOC107012923 [Solanum pennellii]
Solyc07g045090.3.1	1453	64.7002323722787	5.49517189116407	-3.55753437862931	6.89788917789919e-07	Down	2.70932893217711e-08	NA	GO:0003824//catalytic activity;GO:0005488//binding	GO:0008152//metabolic process	K07119//uncharacterized protein	gi|460396077|ref|XP_004243606.1|//PREDICTED: 2-alkenal reductase (NADP(+)-dependent)-like [Solanum lycopersicum]
Solyc11g011370.2.1	3645	105.083647498106	29.8581644951413	-1.81534079813172	0.0389903657961613	Down	0.00938526562693152	NA	NA	NA	K06678//condensin complex subunit 3	gi|723741839|ref|XP_010312686.1|//PREDICTED: condensin complex subunit 3 [Solanum lycopersicum]
Solyc01g087580.3.1	375	151.261723691392	70.4014576785903	-1.10336975862326	0.000344286268072702	Down	3.21877869134937e-05	NA	NA	NA	NA	gi|697139518|ref|XP_009623848.1|//PREDICTED: uncharacterized protein LOC104114990 [Nicotiana tomentosiformis]
Solyc04g080010.3.1	1554	789.73348247034	2303.3093937396	1.5442704522572	1.15253064319223e-06	Up	4.84773987618103e-08	NA	GO:0016757//transferase activity, transferring glycosyl groups	NA	K08237//hydroquinone glucosyltransferase [EC:2.4.1.218]	gi|460385076|ref|XP_004238231.1|//PREDICTED: hydroquinone glucosyltransferase [Solanum lycopersicum]
Solyc02g079880.3.1	3022	2538.60277427949	907.091116956413	-1.48471528684818	3.33880063520678e-16	Down	2.36152941843068e-18	NA	NA	NA	NA	gi|460373916|ref|XP_004232758.1|//PREDICTED: uncharacterized protein LOC101266783 isoform X1 [Solanum lycopersicum];gi|723674071|ref|XP_010316627.1|//PREDICTED: uncharacterized protein LOC101266783 isoform X2 [Solanum lycopersicum]
Solyc06g063190.3.1	3670	783.521358627132	1973.50934157629	1.33271884031275	0.000221472260346424	Up	1.92475892174657e-05	NA	NA	NA	K05387//glutamate receptor, ionotropic, plant	gi|723709998|ref|XP_004241862.2|//PREDICTED: glutamate receptor 2.8-like [Solanum lycopersicum]
Solyc09g014450.3.1	1226	377.888399176937	872.947381776737	1.20793446597145	1.3445880037644e-06	Up	5.75673870686186e-08	NA	NA	NA	K04645//clathrin light chain B	gi|460401648|ref|XP_004246329.1|//PREDICTED: clathrin light chain 2-like [Solanum lycopersicum]
Solyc01g073720.2.1	551	77.8981018655079	37.2131119446009	-1.06577713391549	0.036991794166773	Down	0.00878450732809147	NA	NA	NA	NA	gi|723659435|ref|XP_010322022.1|//PREDICTED: uncharacterized protein LOC104647874 [Solanum lycopersicum]
Solyc03g064040.1.1	264	238.907877393635	588.296801037925	1.30008976751463	2.63084625325067e-11	Up	4.12739987812464e-13	GO:0043231//intracellular membrane-bounded organelle	NA	NA	NA	gi|57013950|ref|YP_173422.1|//hypothetical protein NitaMp080 [Nicotiana tabacum]
Solyc03g123390.3.1	2848	332.779761794411	32.8299198512188	-3.34148456483371	5.59807584119106e-06	Down	2.8580093741521e-07	NA	NA	NA	NA	gi|460379590|ref|XP_004235544.1|//PREDICTED: uncharacterized protein LOC101251165 [Solanum lycopersicum]
Solyc02g085050.3.1	1063	992.39232782642	2360.43021935512	1.25006734671202	1.34531763878038e-17	Up	8.40190850404604e-20	GO:0044424//intracellular part	GO:0046872//metal ion binding;GO:0016462//pyrophosphatase activity	GO:0006793//phosphorus metabolic process	K01507//inorganic pyrophosphatase [EC:3.6.1.1]	gi|460373228|ref|XP_004232423.1|//PREDICTED: soluble inorganic pyrophosphatase [Solanum lycopersicum]
Solyc02g071000.1.1	798	346.762572662863	34.7747967443955	-3.31783420419498	0.000266020683300067	Down	2.38497851130195e-05	GO:0009521//photosystem;GO:0010287//plastoglobule;GO:0009535//chloroplast thylakoid membrane;GO:0009523//photosystem II;GO:0009534//chloroplast thylakoid;GO:0031224//intrinsic component of membrane;GO:0016021//integral component of membrane;GO:0009941//chloroplast envelope;GO:0009522//photosystem I	GO:0043169//cation binding;GO:0031409//pigment binding;GO:0046872//metal ion binding;GO:0046906//tetrapyrrole binding;GO:0016168//chlorophyll binding	GO:0009768//photosynthesis, light harvesting in photosystem I;GO:0006464//cellular protein modification process;GO:0006091//generation of precursor metabolites and energy;GO:0009416//response to light stimulus;GO:0018298//protein-chromophore linkage	K08912//light-harvesting complex II chlorophyll a/b binding protein 1	gi|723675653|ref|XP_010316911.1|//PREDICTED: chlorophyll a-b binding protein 1B, chloroplastic-like [Solanum lycopersicum]
Solyc01g107730.3.1	1659	188.898742322843	45.7649074399346	-2.0452994284906	0.0439020684750349	Down	0.010909449295621	GO:0043231//intracellular membrane-bounded organelle	NA	GO:0009987//cellular process	K14505//cyclin D3, plant	gi|350536333|ref|NP_001234753.1|//CycD3;2 protein [Solanum lycopersicum]
Solyc05g051850.3.1	2017	1112.95710939069	254.843125578398	-2.12671665383705	8.50679267113937e-07	Down	3.41542219055069e-08	GO:0044424//intracellular part	GO:0016872//intramolecular lyase activity	GO:0006644//phospholipid metabolic process;GO:0006020//inositol metabolic process	K01858//myo-inositol-1-phosphate synthase [EC:5.5.1.4]	gi|849564061|ref|NP_001296998.1|//inositol-3-phosphate synthase [Solanum lycopersicum]
Solyc02g093720.3.1	2010	188.346290092668	57.469824410414	-1.71251107003893	0.0484854790606583	Down	0.0124059346535567	NA	NA	NA	NA	gi|460371988|ref|XP_004231816.1|//PREDICTED: histone H3.v1-like [Solanum lycopersicum]
BGI_novel_G000034	569	390.0731166111	135.250694729976	-1.52810856827991	0.00340734980077929	Down	0.000488412443226829	NA	NA	NA	K01369//legumain [EC:3.4.22.34];K03549//KUP system potassium uptake protein;K02350//DNA polymerase zeta [EC:2.7.7.7];K12447//UDP-sugar pyrophosphorylase [EC:2.7.7.64];K05387//glutamate receptor, ionotropic, plant	gi|15144516|gb|AAK84483.1|//putative copia-like polyprotein [Solanum lycopersicum]
Solyc02g031710.3.1	1293	373.427052021746	984.461994157534	1.39850906704175	0.000395135615644351	Up	3.79080443902594e-05	NA	NA	NA	K19042//E3 ubiquitin-protein ligase BOI and related proteins [EC:2.3.2.27]	gi|460371510|ref|XP_004231579.1|//PREDICTED: probable BOI-related E3 ubiquitin-protein ligase 3 [Solanum lycopersicum]
Solyc09g008760.1.1	714	71.8373009138455	21.6687514266137	-1.72911711944496	0.00462577607763561	Down	0.000701523828779125	NA	NA	NA	NA	gi|460402166|ref|XP_004246585.1|//PREDICTED: probable cytochrome P450 556A1 [Solanum lycopersicum]
Solyc00g233480.1.1	552	93.4439632522524	27.8655346113328	-1.74561963238978	0.00225760845310645	Down	0.00029583334244431	NA	NA	NA	K05681//ATP-binding cassette, subfamily G (WHITE), member 2	gi|970030690|ref|XP_015076630.1|//PREDICTED: ABC transporter G family member 11-like [Solanum pennellii]
Solyc09g072980.2.1	1840	1146.09705274273	536.154155943612	-1.09600944670843	1.69669669017565e-14	Down	1.53838939929395e-16	NA	NA	NA	K10523//speckle-type POZ protein	gi|723731656|ref|XP_010326625.1|//PREDICTED: BTB/POZ and MATH domain-containing protein 2-like [Solanum lycopersicum]
Solyc09g011370.2.1	2092	1238.71060565525	492.5489711366	-1.33050010136903	0.000898996909783917	Down	9.89640691507803e-05	NA	NA	NA	K10268//F-box and leucine-rich repeat protein 2/20	gi|731402970|ref|XP_010654858.1|//PREDICTED: F-box/LRR-repeat protein 14 [Vitis vinifera];gi|460401787|ref|XP_004246397.1|//PREDICTED: F-box/LRR-repeat protein 14 [Solanum lycopersicum]
Solyc11g007330.2.1	715	27.6858773703015	9.26829435428467	-1.5787744728635	0.0496391602313021	Down	0.0127851651972722	NA	NA	NA	K00850//6-phosphofructokinase 1 [EC:2.7.1.11];K19748//RAB6-interacting golgin	gi|460409124|ref|XP_004249990.1|//PREDICTED: calponin homology domain-containing protein DDB_G0272472 [Solanum lycopersicum]
Solyc02g092750.3.1	1527	1068.22518601594	2872.03498864742	1.42685752014072	2.6690762688144e-22	Up	8.53542072419954e-25	GO:0043234//protein complex	GO:0043169//cation binding;GO:0004721//phosphoprotein phosphatase activity	GO:0006464//cellular protein modification process	K01102//pyruvate dehydrogenase phosphatase [EC:3.1.3.43]	gi|460372150|ref|XP_004231895.1|//PREDICTED: probable protein phosphatase 2C 78 [Solanum lycopersicum]
Solyc06g076490.3.1	1792	1639.19941346975	503.084881221268	-1.70411763393386	6.92958408899447e-09	Down	1.79366209677509e-10	NA	NA	NA	NA	gi|460391182|ref|XP_004241202.1|//PREDICTED: uncharacterized protein LOC101266832 [Solanum lycopersicum]
Solyc05g051425.1.1	930	11.5546659380353	39.5023027856873	1.77346120758447	0.0045337176401598	Up	0.000684151296263392	NA	NA	NA	K02183//calmodulin	gi|460388746|ref|XP_004240026.1|//PREDICTED: ovarian cancer-associated gene 2 protein homolog [Solanum lycopersicum]
Solyc03g044028.1.1	2753	64.0875564134385	17.0144961500925	-1.91327983312535	0.00858046944399548	Down	0.00147075315225144	GO:0005739//mitochondrion	NA	NA	NA	gi|57013998|ref|YP_173469.1|//hypothetical protein NitaMp132 [Nicotiana tabacum]
Solyc06g061080.3.1	3781	29.0631824390036	72.5537881380578	1.31985825370352	0.0051881888496247	Up	0.000803798407929063	NA	NA	NA	K12581//CCR4-NOT transcription complex subunit 7/8;K13126//polyadenylate-binding protein;K01054//acylglycerol lipase [EC:3.1.1.23]	gi|460392741|ref|XP_004241972.1|//PREDICTED: NAC domain-containing protein 86-like [Solanum lycopersicum]
Solyc05g023730.1.1	258	839.58662355949	2104.30598920113	1.32559341693049	2.42773394128682e-06	Up	1.10700283553034e-07	GO:0030529//intracellular ribonucleoprotein complex;GO:0009536//plastid	GO:0005198//structural molecule activity;GO:0003824//catalytic activity;GO:0003676//nucleic acid binding	GO:0010467//gene expression	K02886//large subunit ribosomal protein L2	gi|827346437|gb|AKJ77629.1|//ribosomal protein L2 (chloroplast) [Fagopyrum cymosum]
Solyc01g006180.3.1	2508	518.494450908331	197.680535864341	-1.39115772235875	1.06132708132231e-06	Down	4.41221378804044e-08	NA	NA	NA	K13427//nitric-oxide synthase, plant [EC:1.14.13.39]	gi|460365526|ref|XP_004228652.1|//PREDICTED: putative nitric oxide synthase [Solanum lycopersicum]
Solyc04g074850.3.1	2207	196.169519276939	398.168786884117	1.02127923649098	0.0314275315493514	Up	0.00713326929410221	GO:0044464//cell part	GO:0015291//secondary active transmembrane transporter activity	GO:0015893//drug transport	K03327//multidrug resistance protein, MATE family	gi|806638729|ref|NP_001234398.2|//ripening regulated protein DDTFR18 [Solanum lycopersicum]
Solyc06g053140.3.1	917	540.670851126574	1185.01508013427	1.13208293408018	0.00190556129426633	Up	0.000241815584859305	NA	NA	NA	K15692//E3 ubiquitin-protein ligase RNF13 [EC:2.3.2.27]	gi|460390708|ref|XP_004240967.1|//PREDICTED: rhodanese-like domain-containing protein 14, chloroplastic [Solanum lycopersicum]
Solyc12g005550.2.1	629	180.878407654832	380.282451499576	1.07205116931579	0.000136057837345021	Up	1.09388863207792e-05	NA	NA	NA	NA	gi|723749353|ref|XP_010314045.1|//PREDICTED: uncharacterized protein LOC104644892 [Solanum lycopersicum]
Solyc06g073970.2.1	1595	717.177974534246	354.07618247432	-1.01827138014922	0.0258695531812249	Down	0.00561090948418967	NA	NA	NA	NA	gi|460391479|ref|XP_004241348.1|//PREDICTED: uncharacterized protein LOC101260237 [Solanum lycopersicum]
Solyc06g053780.3.1	2021	264.520629200117	118.495206486906	-1.15855153970872	0.000198796110816673	Down	1.69851756081514e-05	NA	NA	NA	NA	gi|460390821|ref|XP_004241023.1|//PREDICTED: uncharacterized protein LOC101253093 [Solanum lycopersicum]
Solyc02g032100.3.1	1229	257.586919623395	646.582967594607	1.32777616960455	4.88252999891419e-06	Up	2.44861267439903e-07	NA	NA	NA	K14709//solute carrier family 39 (zinc transporter), member 1/2/3	gi|460371552|ref|XP_004231600.1|//PREDICTED: zinc transporter 8-like [Solanum lycopersicum]
Solyc04g079470.3.1	1609	674.675455100099	2498.8487060914	1.88899797323823	4.55190887919744e-08	Up	1.38715056138071e-09	NA	NA	NA	K13963//serpin B	gi|460384998|ref|XP_004238193.1|//PREDICTED: serpin-ZX-like isoform X2 [Solanum lycopersicum]
Solyc04g080435.1.1	595	5.74531339591868	19.4058163993531	1.75603163193087	0.0203202545110033	Up	0.00417566704812264	NA	NA	NA	NA	gi|460385215|ref|XP_004238300.1|//PREDICTED: protein RADIALIS-like 3 [Solanum lycopersicum]
Solyc06g072016.1.1	2257	73.0372301525028	27.995460704943	-1.38343913208137	0.0122797005014744	Down	0.002255436337404	NA	NA	NA	K03231//elongation factor 1-alpha;K07767//katanin p60 ATPase-containing subunit A1 [EC:3.6.4.3]	gi|970033567|ref|XP_015078083.1|//PREDICTED: uncharacterized protein LOC107021876 [Solanum pennellii];gi|723710865|ref|XP_010322970.1|//PREDICTED: uncharacterized protein LOC101252297 [Solanum lycopersicum]
Solyc03g117030.2.1	1233	2308.61939016473	1147.65198863391	-1.00834511445279	7.51974228081635e-09	Down	1.9662230568726e-10	GO:0043231//intracellular membrane-bounded organelle;GO:0005634//nucleus;GO:0030014//CCR4-NOT complex	GO:0005488//binding;GO:0000175//3'-5'-exoribonuclease activity;GO:0003676//nucleic acid binding	GO:0090503//RNA phosphodiester bond hydrolysis, exonucleolytic;GO:0000288//nuclear-transcribed mRNA catabolic process, deadenylation-dependent decay	K12581//CCR4-NOT transcription complex subunit 7/8	gi|697103456|ref|XP_009605547.1|//PREDICTED: probable CCR4-associated factor 1 homolog 6 [Nicotiana tomentosiformis];gi|460380381|ref|XP_004235935.1|//PREDICTED: probable CCR4-associated factor 1 homolog 7 [Solanum lycopersicum]
Solyc12g096780.2.1	1422	492.113752429633	55.068884184517	-3.15968255230035	0.000354365591557723	Down	3.33167649850546e-05	NA	NA	NA	K07512//mitochondrial trans-2-enoyl-CoA reductase [EC:1.3.1.38]	gi|460415368|ref|XP_004253031.1|//PREDICTED: probable trans-2-enoyl-CoA reductase, mitochondrial [Solanum lycopersicum]
Solyc02g071280.3.1	2426	972.691446209081	2049.45291998054	1.07518471277516	1.20621782403629e-06	Up	5.08784338781629e-08	GO:0044424//intracellular part	NA	GO:0042254//ribosome biogenesis	K02860//16S rRNA processing protein RimM;K02912//large subunit ribosomal protein L32e;K00972//UDP-N-acetylglucosamine/UDP-N-acetylgalactosamine diphosphorylase [EC:2.7.7.23 2.7.7.83]	gi|460374365|ref|XP_004232981.1|//PREDICTED: uncharacterized protein LOC101255162 isoform X1 [Solanum lycopersicum]
Solyc08g068610.3.1	1720	3329.19935645237	693.958428939406	-2.26225411643771	4.23191091735523e-40	Down	3.98035263107151e-43	NA	GO:0016831//carboxy-lyase activity;GO:0048037//cofactor binding;GO:0016830//carbon-carbon lyase activity;GO:0030170//pyridoxal phosphate binding	GO:0019752//carboxylic acid metabolic process;GO:0043436//oxoacid metabolic process	K01590//histidine decarboxylase [EC:4.1.1.22]	gi|350538737|ref|NP_001233845.1|//aromatic amino acid decarboxylase 1A [Solanum lycopersicum];gi|922959915|ref|NP_001233852.2|//aromatic amino acid decarboxylase 1B [Solanum lycopersicum]
Solyc04g071010.3.1	1242	23.5476845221172	4.06142945404683	-2.53552571404177	0.00937062290402236	Down	0.00163509966248517	GO:0009536//plastid;GO:0019866//organelle inner membrane	NA	GO:0046907//intracellular transport	K15111//solute carrier family 25 (mitochondrial S-adenosylmethionine transporter), member 26	gi|723693721|ref|XP_010320064.1|//PREDICTED: protein MITOFERRINLIKE 1, chloroplastic [Solanum lycopersicum]
Solyc02g079520.2.1	659	54.958840596484	130.862018680435	1.25162295632022	0.0365005659167576	Up	0.00863054275484806	NA	GO:0046872//metal ion binding	NA	K16465//centrin-1	gi|460373937|ref|XP_004232768.1|//PREDICTED: calcium-binding protein KIC-like [Solanum lycopersicum]
Solyc09g091030.3.1	1944	6120.02960105988	13626.4349143843	1.15479762304975	0.000846785819903655	Up	9.21333555741674e-05	NA	GO:0016160//amylase activity;GO:0043167//ion binding	GO:0005976//polysaccharide metabolic process	K01177//beta-amylase [EC:3.2.1.2]	gi|902763174|ref|NP_001234556.2|//beta-amylase [Solanum lycopersicum]
BGI_novel_G000118	5813	505.674068654335	192.868264165365	-1.39059202565693	0.00378727313126022	Down	0.000553699901733529	NA	NA	NA	K13024//inositol-hexakisphosphate/diphosphoinositol-pentakisphosphate 1-kinase [EC:2.7.4.24];K01191//alpha-mannosidase [EC:3.2.1.24];K13356//alcohol-forming fatty acyl-CoA reductase [EC:1.2.1.84];K08247//methionine S-methyltransferase [EC:2.1.1.12]	gi|47824950|gb|AAT38724.1|//Putative retrotransposon protein, identical [Solanum demissum]
Solyc05g014320.3.1	2043	697.833542560013	290.059745624487	-1.26653285201119	8.24353961804e-08	Down	2.64860151760954e-09	NA	NA	NA	K14493//gibberellin receptor GID1 [EC:3.-.-.-]	gi|460386990|ref|XP_004239175.1|//PREDICTED: probable carboxylesterase 11 [Solanum lycopersicum]
Solyc04g007150.3.1	1890	61.459670992185	17.808969776669	-1.78703598285501	0.012006878728462	Down	0.00219580329831749	NA	GO:0004558//alpha-1,4-glucosidase activity;GO:0005488//binding	GO:0044238//primary metabolic process	K15925//alpha-D-xyloside xylohydrolase [EC:3.2.1.177]	gi|460382466|ref|XP_004236960.1|//PREDICTED: alpha-xylosidase 1-like [Solanum lycopersicum]
Solyc12g056160.2.1	2923	10.3124719910736	43.6532733190068	2.0816996367128	0.00016154631787939	Up	1.33852894663001e-05	NA	NA	NA	NA	gi|460414431|ref|XP_004252574.1|//PREDICTED: cation/H(+) antiporter 18 [Solanum lycopersicum]
Solyc08g014150.3.1	2273	3597.31924141728	1466.78667018922	-1.29426313570167	7.06729350648277e-07	Down	2.79759638637968e-08	NA	NA	NA	K12486//stromal membrane-associated protein;K11968//ariadne-1 [EC:2.3.2.27]	gi|460398419|ref|XP_004244757.1|//PREDICTED: C2 and GRAM domain-containing protein At1g03370-like isoform X1 [Solanum lycopersicum]
Solyc10g051120.2.1	713	149.206512762926	405.187412962898	1.44127884827889	0.000501150224775875	Up	5.00207504262753e-05	GO:0016021//integral component of membrane;GO:0005743//mitochondrial inner membrane	NA	GO:0006850//mitochondrial pyruvate transport	NA	gi|460406559|ref|XP_004248730.1|//PREDICTED: mitochondrial pyruvate carrier 1 [Solanum lycopersicum];gi|970056248|ref|XP_015089778.1|//PREDICTED: mitochondrial pyruvate carrier 1-like isoform X1 [Solanum pennellii]
Solyc08g081060.3.1	3091	218.005336235763	87.023211830187	-1.32489127948039	3.42970867428213e-06	Down	1.63231048542114e-07	NA	NA	NA	NA	gi|460400165|ref|XP_004245606.1|//PREDICTED: uncharacterized protein LOC101258476 [Solanum lycopersicum]
Solyc06g075930.1.1	441	2965.6293753123	717.799594694158	-2.04668529695284	0.0200949423125653	Down	0.00411575868884897	GO:0043231//intracellular membrane-bounded organelle;GO:0000785//chromatin	GO:0003676//nucleic acid binding	GO:0034728//nucleosome organization	K11254//histone H4	gi|970034524|ref|XP_015078589.1|//PREDICTED: uncharacterized protein LOC107022503 [Solanum pennellii];gi|971575188|ref|XP_006361210.2|//PREDICTED: uncharacterized protein LOC102591967 [Solanum tuberosum]
Solyc01g098410.3.1	2360	569.176286200116	227.896131817986	-1.32049911827619	0.00563432716646551	Down	0.00088888706807208	GO:0005622//intracellular;GO:0016021//integral component of membrane;GO:0005886//plasma membrane	GO:0019199//transmembrane receptor protein kinase activity;GO:0005524//ATP binding;GO:0008061//chitin binding;GO:0004674//protein serine/threonine kinase activity;GO:0016301//kinase activity;GO:2001080//chitosan binding;GO:0042803//protein homodimerization activity	GO:0009817//defense response to fungus, incompatible interaction;GO:0032491//detection of molecule of fungal origin;GO:0042742//defense response to bacterium;GO:0035556//intracellular signal transduction;GO:0046777//protein autophosphorylation;GO:0010200//response to chitin;GO:0032499//detection of peptidoglycan;GO:0002752//cell surface pattern recognition receptor signaling pathway	K13429//chitin elicitor receptor kinase 1	gi|350539611|ref|NP_001234730.1|//Lyk13 precursor [Solanum lycopersicum];gi|723659559|ref|XP_010323689.1|//PREDICTED: lyk13 isoform X1 [Solanum lycopersicum]
Solyc08g079740.3.1	3581	49.9377700062478	11.6255120233624	-2.10283714014976	0.0250071867846617	Down	0.0053721232708961	GO:0031224//intrinsic component of membrane	GO:0032559//adenyl ribonucleotide binding;GO:0016301//kinase activity;GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	GO:0006464//cellular protein modification process	K20718;K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460400330|ref|XP_004245688.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g12460 [Solanum lycopersicum]
Solyc02g092860.3.1	2983	2165.10567277158	903.451968505756	-1.26091763238788	0.00657492278650479	Down	0.0010705893837469	NA	NA	NA	K00517;K13260//isoflavone 2'-hydroxylase [EC:1.14.13.89]	gi|460372134|ref|XP_004231887.1|//PREDICTED: cytochrome P450 81D1-like [Solanum lycopersicum]
Solyc01g086730.3.1	879	738.169964452149	122.442021415195	-2.59185426880513	1.7422418233665e-30	Down	2.75297805046626e-33	NA	NA	NA	NA	gi|970000231|ref|XP_015087024.1|//PREDICTED: probable magnesium transporter NIPA8 [Solanum pennellii]
Solyc11g069640.2.1	1414	227.65115910829	57.7950530832121	-1.97780688809094	2.38837519281508e-06	Down	1.08725883495344e-07	NA	GO:0016836//hydro-lyase activity;GO:0046914//transition metal ion binding	GO:0044237//cellular metabolic process	K01674//carbonic anhydrase [EC:4.2.1.1]	gi|460411510|ref|XP_004251153.1|//PREDICTED: alpha carbonic anhydrase 7 [Solanum lycopersicum]
Solyc11g006230.2.1	1446	442.754524283281	107.518415676603	-2.0419232644754	0.0430625549596345	Down	0.0106133482897128	NA	NA	GO:0009955//adaxial/abaxial pattern specification;GO:0048366//leaf development	NA	gi|460408983|ref|XP_004249920.1|//PREDICTED: GRF1-interacting factor 1-like [Solanum lycopersicum]
Solyc12g014030.1.1	354	26.2036651483415	6.00489056404207	-2.12555875899939	0.0305953132734782	Down	0.00687646356266963	NA	NA	NA	NA	gi|460412981|ref|XP_004251874.1|//PREDICTED: uncharacterized protein LOC101254764 [Solanum lycopersicum]
Solyc03g005520.1.1	636	40.0405262550751	8.64685472799813	-2.21121357919502	0.0033285506702161	Down	0.000473235251420115	GO:0043231//intracellular membrane-bounded organelle	GO:0001071//nucleic acid binding transcription factor activity;GO:0003676//nucleic acid binding	GO:0000160//phosphorelay signal transduction system;GO:0006950//response to stress;GO:0006351//transcription, DNA-templated	K14516//ethylene-responsive transcription factor 1	gi|460376904|ref|XP_004234236.1|//PREDICTED: ethylene-responsive transcription factor 1B-like [Solanum lycopersicum]
BGI_novel_G000237	834	64.7235745614659	199.003590544214	1.62043126856961	0.000862328476005499	Up	9.43435368030095e-05	NA	NA	NA	NA	gi|460388742|ref|XP_004240024.1|//PREDICTED: uncharacterized protein LOC101257471 [Solanum lycopersicum]
Solyc05g056330.3.1	1871	103.942348481231	51.261853489919	-1.01982601221258	0.00456647778349905	Down	0.000690574655751415	NA	GO:0016301//kinase activity	GO:0016310//phosphorylation	K14664//IAA-amino acid hydrolase [EC:3.5.1.-];K03353//anaphase-promoting complex subunit 6;K07759//poly(ADP-ribose) glycohydrolase [EC:3.2.1.143];K15502//serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A;K08472//mlo protein;K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K01601//ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39];K02469//DNA gyrase subunit A [EC:5.99.1.3];K05283//phosphatidylinositol glycan, class W [EC:2.3.-.-]	gi|460389061|ref|XP_004240177.1|//PREDICTED: uncharacterized protein LOC101259339 [Solanum lycopersicum]
Solyc05g007800.3.1	956	221.8896862081	475.831966684568	1.10060958586829	2.16994820804302e-05	Up	1.33968585756155e-06	NA	NA	NA	K03251//translation initiation factor 3 subunit D	gi|723697499|ref|XP_010320691.1|//PREDICTED: uncharacterized protein LOC101245646 [Solanum lycopersicum]
Solyc12g033030.1.1	249	140.53283974051	297.496660248314	1.08196617346227	0.000372762364303254	Up	3.54250463592935e-05	GO:0030529//intracellular ribonucleoprotein complex;GO:0009536//plastid	GO:0003723//RNA binding;GO:0005198//structural molecule activity	GO:0010467//gene expression	K02892//large subunit ribosomal protein L23	gi|404474567|ref|YP_006666072.1|//ribosomal protein L23 (chloroplast) [Capsicum annuum]
Solyc01g006300.3.1	1245	13241.1310491108	6335.74633482796	-1.06343988121337	1.7799244619338e-07	Down	6.12727946828227e-09	NA	GO:0016209//antioxidant activity;GO:0005506//iron ion binding;GO:0003824//catalytic activity	GO:0042743//hydrogen peroxide metabolic process;GO:0006950//response to stress	K00430//peroxidase [EC:1.11.1.7]	gi|930697434|ref|NP_001234132.2|//peroxidase precursor [Solanum lycopersicum]
Solyc10g009380.3.1	1521	56.5668981308408	11.3139471412254	-2.32185572653672	0.00102681884239746	Down	0.000116048299569676	NA	NA	NA	NA	gi|460405244|ref|XP_004248086.1|//PREDICTED: uncharacterized protein LOC101265371 [Solanum lycopersicum]
Solyc02g080330.3.1	1518	164.974018511409	14.0002813795232	-3.55871110662433	5.65685655515803e-06	Down	2.89014717904613e-07	NA	GO:0005506//iron ion binding;GO:0016712//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen	GO:0008152//metabolic process	K00517	gi|723673933|ref|XP_010316601.1|//PREDICTED: cytochrome P450 77A1 [Solanum lycopersicum]
Solyc03g121100.3.1	911	366.305305515885	177.194863250031	-1.04770981517408	0.0389067080897505	Down	0.00935634605378801	NA	NA	NA	K20728	gi|460379777|ref|XP_004235637.1|//PREDICTED: acid phosphatase 1-like [Solanum lycopersicum]
Solyc04g080350.3.1	1362	150.059658522501	394.461851508287	1.39434960328998	1.62906132875446e-10	Up	3.07057835103832e-12	NA	NA	NA	K14291//phosphorylated adapter RNA export protein	gi|460385129|ref|XP_004238257.1|//PREDICTED: uncharacterized protein LOC101259242 isoform X1 [Solanum lycopersicum];gi|723695766|ref|XP_010320392.1|//PREDICTED: uncharacterized protein LOC101259242 isoform X3 [Solanum lycopersicum]
Solyc05g015890.3.1	1813	1.49524306113172	7.45315694339828	2.3174716166402	0.0177103766398591	Up	0.00353407967260394	NA	NA	NA	K12600//superkiller protein 3	gi|460387132|ref|XP_004239243.1|//PREDICTED: uncharacterized protein LOC101252688 [Solanum lycopersicum]
Solyc01g017600.3.1	1458	2078.46392116572	623.929989369361	-1.73606164553277	2.66394941314775e-05	Down	1.69678944938267e-06	NA	NA	NA	K03695//ATP-dependent Clp protease ATP-binding subunit ClpB	gi|460364885|ref|XP_004228340.1|//PREDICTED: transmembrane protein 45B-like [Solanum lycopersicum]
Solyc11g011020.2.1	2504	203.641190220863	91.8728045239854	-1.14831962844367	0.00555691917506966	Down	0.000873469086284464	NA	GO:0016740//transferase activity	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460409491|ref|XP_004250172.1|//PREDICTED: probable inactive receptor kinase At1g48480 [Solanum lycopersicum]
Solyc04g011630.1.1	513	94.9470166533478	21.9489344770728	-2.11297176486881	1.65096574779497e-06	Down	7.21132894352883e-08	NA	NA	NA	K14494//DELLA protein	gi|460382008|ref|XP_004236732.1|//PREDICTED: scarecrow-like protein 14 [Solanum lycopersicum]
Solyc12g009743.1.1	339	1.18023887348389	8.06256223366551	2.77215950917943	0.0036321837984185	Up	0.000526106381636991	NA	NA	NA	K13466//EIX receptor 1/2;K19613//leucine-rich repeat protein SHOC2;K02146//V-type H+-transporting ATPase subunit d;K10406//kinesin family member C2/C3	gi|723749424|ref|XP_010314065.1|//PREDICTED: receptor-like protein 12 [Solanum lycopersicum]
Solyc09g011510.2.1	839	380.055295328338	53.744690193266	-2.82201520252897	0.00272022117021088	Down	0.00037057640546778	NA	GO:0016765//transferase activity, transferring alkyl or aryl (other than methyl) groups	GO:0009755//hormone-mediated signaling pathway	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|723727223|ref|XP_010325822.1|//PREDICTED: LOW QUALITY PROTEIN: probable glutathione S-transferase [Solanum lycopersicum]
Solyc12g006500.1.1	1053	989.005711239267	402.047634982345	-1.2986124087824	8.4883808509155e-08	Down	2.74004167422329e-09	NA	NA	NA	K15280//solute carrier family 35, member C2	gi|460412348|ref|XP_004251563.1|//PREDICTED: probable sugar phosphate/phosphate translocator At4g32390 [Solanum lycopersicum]
Solyc07g017610.3.1	3852	376.292553944616	928.821362777566	1.30354641267242	0.00123129017333492	Up	0.00014360419628812	NA	GO:0004753//saccharopine dehydrogenase activity	GO:0008152//metabolic process	K14157//alpha-aminoadipic semialdehyde synthase [EC:1.5.1.8 1.5.1.9]	gi|460394627|ref|XP_004242902.1|//PREDICTED: alpha-aminoadipic semialdehyde synthase [Solanum lycopersicum]
Solyc05g006220.3.1	1715	2495.80081288043	1166.52968837667	-1.09727977426841	6.89875495676607e-05	Down	4.99887210185532e-06	NA	NA	NA	K14664//IAA-amino acid hydrolase [EC:3.5.1.-]	gi|460386056|ref|XP_004238716.1|//PREDICTED: IAA-amino acid hydrolase ILR1-like 2 [Solanum lycopersicum]
Solyc02g005070.2.1	1169	19.0754465974734	3.96905370519917	-2.26484984540242	0.0231666463243083	Down	0.00490613439275889	NA	NA	NA	K07466//replication factor A1	gi|723726857|ref|XP_010325772.1|//PREDICTED: uncharacterized protein LOC101258482 [Solanum lycopersicum]
Solyc03g063510.1.1	660	45.3472192873044	116.380112813666	1.3597585578424	4.31259516051013e-05	Up	2.92049333668857e-06	GO:0043231//intracellular membrane-bounded organelle	NA	NA	K03879//NADH-ubiquinone oxidoreductase chain 2 [EC:1.6.5.3]	gi|570699896|ref|YP_008992291.1|//hypothetical protein Salmi_Mp025 (mitochondrion) [Salvia miltiorrhiza]
Solyc02g030100.3.1	3860	196.75291313649	79.1696068211603	-1.31336640484709	0.000167034111993689	Down	1.39320777385255e-05	NA	NA	NA	K17600//vacuolar protein sorting-associated protein 54	gi|723667896|ref|XP_010315639.1|//PREDICTED: vacuolar protein sorting-associated protein 54, chloroplastic-like [Solanum lycopersicum]
Solyc02g082850.3.1	1560	427.070168807079	1239.81438062986	1.53757910983008	7.26675770922799e-06	Up	3.87669767933984e-07	NA	NA	NA	K00640//serine O-acetyltransferase [EC:2.3.1.30]	gi|460373495|ref|XP_004232554.1|//PREDICTED: serine acetyltransferase 2-like [Solanum lycopersicum]
Solyc08g081270.3.1	941	1104.29997862966	2329.2431505672	1.07672912325038	6.24029811498222e-11	Up	1.06822258928401e-12	NA	GO:0016879//ligase activity, forming carbon-nitrogen bonds;GO:0032559//adenyl ribonucleotide binding	GO:0006464//cellular protein modification process	K10576//ubiquitin-conjugating enzyme E2 H [EC:2.3.2.23]	gi|460400131|ref|XP_004245589.1|//PREDICTED: ubiquitin-conjugating enzyme E2 5 [Solanum lycopersicum]
Solyc00g170210.3.1	1510	91.8293136406991	190.214682707525	1.05060194478933	2.76968765607283e-05	Up	1.77560111585707e-06	NA	NA	NA	K05605//3-hydroxyisobutyryl-CoA hydrolase [EC:3.1.2.4]	gi|970029818|ref|XP_015076222.1|//PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 4, mitochondrial [Solanum pennellii]
Solyc02g082740.1.1	573	66.9372643832922	180.323336577604	1.42970461874437	0.0011746878947618	Up	0.000135897865928989	NA	NA	NA	K19027//zinc finger FYVE domain-containing protein 26	gi|976924804|gb|KVI08737.1|//Plant disease resistance response protein [Cynara cardunculus var. scolymus]
Solyc08g076885.1.1	1263	93.5130952783042	286.950496547786	1.6175615561765	0.00379553241790371	Up	0.000555050207238214	NA	NA	NA	K02184//formin 2	gi|723725544|ref|XP_010325557.1|//PREDICTED: glycine-rich cell wall structural protein 1.8-like [Solanum lycopersicum]
Solyc09g011810.3.1	1579	1769.96932347166	4053.34441609064	1.1953884113993	4.69130544355422e-07	Up	1.77380059096012e-08	GO:0044424//intracellular part	GO:0019203//carbohydrate phosphatase activity;GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	GO:0005975//carbohydrate metabolic process	K03841//fructose-1,6-bisphosphatase I [EC:3.1.3.11]	gi|460401720|ref|XP_004246365.1|//PREDICTED: fructose-1,6-bisphosphatase, chloroplastic-like [Solanum lycopersicum]
Solyc01g005520.3.1	1231	573.46590194975	1369.30584547271	1.25566510828691	1.28045073423892e-10	Up	2.3604998486722e-12	NA	NA	NA	NA	gi|460365514|ref|XP_004228646.1|//PREDICTED: uncharacterized protein LOC101254513 [Solanum lycopersicum]
Solyc07g039340.3.1	4040	1969.83270373501	760.852270402575	-1.37238484040215	9.63531186151041e-08	Down	3.14289517830306e-09	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13430//serine/threonine-protein kinase PBS1 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|723717219|ref|XP_010324063.1|//PREDICTED: receptor-like serine/threonine-protein kinase ALE2 isoform X3 [Solanum lycopersicum];gi|723717225|ref|XP_010324065.1|//PREDICTED: receptor-like serine/threonine-protein kinase ALE2 isoform X5 [Solanum lycopersicum];gi|723717228|ref|XP_010324066.1|//PREDICTED: receptor-like serine/threonine-protein kinase ALE2 isoform X6 [Solanum lycopersicum];gi|970041671|ref|XP_015082223.1|//PREDICTED: receptor-like serine/threonine-protein kinase ALE2 isoform X3 [Solanum pennellii]
Solyc03g122370.3.1	4399	747.290575221097	361.577032656129	-1.04736628644985	9.97334098246952e-06	Down	5.54574792027462e-07	GO:0005643//nuclear pore;GO:0005829//cytosol;GO:0016363//nuclear matrix	GO:0008536//Ran GTPase binding;GO:0000049//tRNA binding;GO:0015932//nucleobase-containing compound transmembrane transporter activity	GO:0009908//flower development;GO:0010014//meristem initiation;GO:0006409//tRNA export from nucleus;GO:0071528//tRNA re-export from nucleus	K14288//exportin-T	gi|460379594|ref|XP_004235546.1|//PREDICTED: exportin-T isoform X2 [Solanum lycopersicum];gi|661897878|emb|CDO97845.1|//unnamed protein product [Coffea canephora];gi|747042662|ref|XP_011079656.1|//PREDICTED: exportin-T-like isoform X2 [Sesamum indicum]
Solyc01g080200.3.1	6977	1924.46469401292	680.258710797759	-1.50030177329381	8.32301108624378e-16	Down	6.10604650796666e-18	NA	NA	NA	K15271//ATP-dependent DNA helicase HFM1/MER3 [EC:3.6.4.12]	gi|460367178|ref|XP_004229452.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g19020, mitochondrial [Solanum lycopersicum];gi|723658852|ref|XP_010322737.1|//PREDICTED: mediator of RNA polymerase II transcription subunit 33A [Solanum lycopersicum]
Solyc04g007670.1.1	450	24.4161542545956	8.16082502598884	-1.58104906662453	0.0362602812877722	Down	0.00856713944647139	NA	NA	NA	NA	gi|970023295|ref|XP_015072984.1|//PREDICTED: chitin-binding lectin 1-like [Solanum pennellii]
Solyc07g005190.3.1	1853	207.62340182041	493.620944028058	1.24943454533858	2.22351662553724e-07	Up	7.82162545100572e-09	NA	GO:0008238//exopeptidase activity	GO:0019538//protein metabolic process	K01285//lysosomal Pro-X carboxypeptidase [EC:3.4.16.2]	gi|460393943|ref|XP_004242567.1|//PREDICTED: lysosomal Pro-X carboxypeptidase [Solanum lycopersicum]
BGI_novel_G000431	259	49.5869378763851	5.98099610119513	-3.05150245562005	5.47426101594306e-08	Down	1.68676439881767e-09	NA	NA	NA	K18823//soyasaponin III rhamnosyltransferase [EC:2.4.1.273]	gi|460409463|ref|XP_004250158.1|//PREDICTED: UDP-glycosyltransferase 91A1-like [Solanum lycopersicum]
Solyc03g078210.3.1	4091	156.269559015662	401.427388918612	1.36110228172461	7.31155095268514e-08	Up	2.32990355790983e-09	NA	NA	NA	K20098//DNA excision repair protein ERCC-6-like 2 [EC:3.6.4.-];K17913//carlactone synthase / all-trans-10'-apo-beta-carotenal 13,14-cleaving dioxygenase [EC:1.13.11.69 1.13.11.70]	gi|970040051|ref|XP_015081384.1|//PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like [Solanum pennellii];gi|971534342|ref|XP_015169972.1|//PREDICTED: uncharacterized protein LOC107063062 [Solanum tuberosum]
Solyc05g007180.3.1	1719	229.848557464844	71.6462387683678	-1.68172073775072	0.0123425491149236	Down	0.00226930163749555	GO:0043231//intracellular membrane-bounded organelle	GO:0003677//DNA binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0006351//transcription, DNA-templated	K09338//homeobox-leucine zipper protein	gi|831181961|ref|NP_001296720.1|//jasmonic acid 1 2 [Solanum lycopersicum]
Solyc04g079845.1.1	345	27.0243444284757	84.4375349948819	1.6436248416705	0.00505608169095183	Up	0.000780287701139369	NA	NA	NA	NA	gi|971584894|ref|XP_015160374.1|//PREDICTED: protein DA1 isoform X2 [Solanum tuberosum]
Solyc03g097600.3.1	1284	419.325467831076	131.661441699352	-1.67123755473031	4.80407357530961e-08	Down	1.47122493991799e-09	NA	NA	NA	K15382//solute carrier family 50 (sugar transporter)	gi|460379162|ref|XP_004235333.1|//PREDICTED: bidirectional sugar transporter SWEET10-like [Solanum lycopersicum]
Solyc01g095000.3.1	1200	130.127228137303	353.626649380499	1.44230413397817	0.00099007101768255	Up	0.000110963941372322	NA	NA	NA	NA	gi|460368179|ref|XP_004229946.1|//PREDICTED: uncharacterized protein LOC101266162 isoform X1 [Solanum lycopersicum]
Solyc10g078240.2.1	2080	685.892685311972	197.33368968996	-1.79734558972214	1.35429709623358e-12	Down	1.71707344405838e-14	NA	NA	NA	K09754//coumaroylquinate(coumaroylshikimate) 3'-monooxygenase [EC:1.14.13.36]	gi|460407351|ref|XP_004249116.1|//PREDICTED: cytochrome P450 98A2-like [Solanum lycopersicum]
Solyc09g091690.1.1	1167	123.866919291765	39.1381061197149	-1.66214509214128	0.0101010937116104	Down	0.00178726274363068	NA	NA	NA	K11649//SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C;K15030//translation initiation factor 3 subunit M	gi|460404972|ref|XP_004247952.1|//PREDICTED: F-box/kelch-repeat protein At3g23880-like [Solanum lycopersicum]
Solyc07g045315.1.1	639	100.90331132551	240.476039176368	1.25291963239541	0.0238853391389137	Up	0.00508439611918636	NA	NA	NA	K19199//histone-lysine N-methyltransferase SETD3 [EC:2.1.1.43]	gi|970041996|ref|XP_015082391.1|//PREDICTED: ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic [Solanum pennellii]
Solyc06g053370.2.1	1393	94.5088589312044	46.845805761033	-1.01252968382613	0.0251735278373731	Down	0.00541922220787995	GO:0031224//intrinsic component of membrane;GO:0016021//integral component of membrane	GO:0004175//endopeptidase activity;GO:0004252//serine-type endopeptidase activity	GO:0006508//proteolysis	K09651//rhomboid domain-containing protein 1 [EC:3.4.21.-]	gi|723706468|ref|XP_010322237.1|//PREDICTED: rhomboid protein 2 [Solanum lycopersicum]
Solyc09g008205.1.1	2973	23.7464437842026	61.0339037727394	1.36189939443636	0.00958549995409682	Up	0.00167908531927294	NA	GO:0016740//transferase activity	NA	K13680//beta-mannan synthase [EC:2.4.1.32]	gi|460402251|ref|XP_004246627.1|//PREDICTED: mannan synthase 1-like [Solanum lycopersicum]
Solyc02g092250.3.1	1960	500.881935982618	1423.89802954097	1.50730334573871	0.00027168417230641	Up	2.44290884805237e-05	NA	GO:0005506//iron ion binding;GO:0004497//monooxygenase activity	NA	K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30];K15472//premnaspirodiene oxygenase [EC:1.14.13.121]	gi|460372229|ref|XP_004231934.1|//PREDICTED: premnaspirodiene oxygenase-like [Solanum lycopersicum]
Solyc09g082870.2.1	3090	131.516522258658	40.7746393341174	-1.68950003393754	0.00114126638632174	Down	0.000131387326642006	NA	NA	NA	K01537//Ca2+-transporting ATPase [EC:3.6.3.8]	gi|723732261|ref|XP_010326729.1|//PREDICTED: putative calcium-transporting ATPase 13, plasma membrane-type [Solanum lycopersicum]
Solyc05g006530.3.1	12709	280.670856967112	583.25080398656	1.0552371193301	9.92603007300718e-08	Up	3.24519192379354e-09	NA	NA	NA	K11644//paired amphipathic helix protein Sin3a	gi|460386094|ref|XP_004238735.1|//PREDICTED: DEAD-box ATP-dependent RNA helicase ISE2, chloroplastic isoform X1 [Solanum lycopersicum]
Solyc09g007430.1.1	1164	164.816033059391	78.5464723201385	-1.06923820482824	0.00126277052391909	Down	0.000148178377129558	GO:0000229//cytoplasmic chromosome	GO:0043566//structure-specific DNA binding	NA	K01810//glucose-6-phosphate isomerase [EC:5.3.1.9]	gi|460402362|ref|XP_004246681.1|//PREDICTED: protein OSB2, chloroplastic-like [Solanum lycopersicum]
Solyc01g057700.1.1	652	1.82585612342894	11.8226047515294	2.69490293327835	0.00246715077893847	Up	0.000328618154689708	NA	GO:0004674//protein serine/threonine kinase activity;GO:0005524//ATP binding;GO:0005509//calcium ion binding	GO:0006468//protein phosphorylation	K13412//calcium-dependent protein kinase [EC:2.7.11.1]	gi|970031683|ref|XP_015077134.1|//PREDICTED: calcium-dependent protein kinase 11 [Solanum pennellii]
BGI_novel_G000281	1576	34.1532914467947	78.1937084621663	1.19502790991859	0.00406345163221081	Up	0.000600956672920267	NA	NA	NA	NA	NA
Solyc04g018063.1.1	1960	11.4791867067014	38.131666200816	1.73196914084564	0.0180260597291639	Up	0.00360928103380776	NA	GO:0005506//iron ion binding;GO:0016712//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen	GO:0008152//metabolic process	K20769;K13407//fatty acid omega-hydroxylase [EC:1.14.-.-]	gi|723729753|ref|XP_010326268.1|//PREDICTED: uncharacterized protein LOC104649220 [Solanum lycopersicum]
Solyc09g005080.1.1	3420	792.776277419252	2530.06666648271	1.67418970208603	7.301633449179e-43	Up	5.21937680716332e-46	NA	NA	NA	K19613//leucine-rich repeat protein SHOC2;K10406//kinesin family member C2/C3	gi|237899607|gb|ACR33108.1|//verticillium wilt disease resistance protein [Solanum lycopersicum]
Solyc06g084450.3.1	1308	45.4220191432405	10.9138128004105	-2.05723663638269	0.0369469620982926	Down	0.00876830086215312	NA	NA	NA	K20642	gi|460393860|ref|XP_004242526.1|//PREDICTED: rho GTPase-activating protein 2-like [Solanum lycopersicum]
Solyc05g005070.2.1	2434	1360.29016852522	3115.40519603386	1.1955053844325	1.3028888974563e-07	Up	4.38217710431125e-09	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460385908|ref|XP_004238642.1|//PREDICTED: cysteine-rich receptor-like protein kinase 2 isoform X1 [Solanum lycopersicum]
Solyc02g077430.3.1	1280	657.524643516542	1991.89061531036	1.59902155234276	7.05852594959047e-06	Up	3.73619430066516e-07	NA	NA	NA	K00145//N-acetyl-gamma-glutamyl-phosphate reductase [EC:1.2.1.38]	gi|723674942|ref|XP_004232942.2|//PREDICTED: phospholipase A1-IIgamma-like [Solanum lycopersicum]
Solyc09g008060.3.1	1562	802.889027752663	259.014097242381	-1.63216997678186	4.45381479414639e-07	Down	1.6773019597218e-08	NA	GO:0016757//transferase activity, transferring glycosyl groups	NA	K11820//N-hydroxythioamide S-beta-glucosyltransferase [EC:2.4.1.195];K13950//para-aminobenzoate synthetase [EC:2.6.1.85];K13691//pathogen-inducible salicylic acid glucosyltransferase [EC:2.4.1.-]	gi|460402279|ref|XP_004246641.1|//PREDICTED: UDP-glycosyltransferase 86A1-like [Solanum lycopersicum]
Solyc01g100630.2.1	3623	150.523594824454	357.140952150528	1.24650392282807	0.000309499154795845	Up	2.84464422560666e-05	NA	GO:0004601//peroxidase activity;GO:0005488//binding;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process;GO:0050896//response to stimulus;GO:0009987//cellular process	K03781//catalase [EC:1.11.1.6]	gi|32526566|emb|CAD42908.1|//catalase [Prunus persica];gi|937575275|ref|NP_001303139.1|//catalase-2-like [Brassica napus];gi|970020249|ref|XP_015071350.1|//PREDICTED: catalase isozyme 3 [Solanum pennellii];gi|565347640|ref|XP_006340832.1|//PREDICTED: catalase isozyme 2 [Solanum tuberosum];gi|703135840|ref|XP_010105996.1|//Catalase isozyme 1 [Morus notabilis]
Solyc04g082440.3.1	2642	4.04641409348792	24.0459638092641	2.57107888133118	0.000588788429218158	Up	6.04294520281089e-05	NA	NA	NA	K08332//vacuolar protein 8	gi|460385475|ref|XP_004238429.1|//PREDICTED: U-box domain-containing protein 15 [Solanum lycopersicum]
Solyc02g090180.3.1	4242	307.367810757576	139.61407558435	-1.13852168778033	8.28122522706864e-07	Down	3.31498255891687e-08	NA	GO:0004175//endopeptidase activity	GO:0019538//protein metabolic process	K01354//oligopeptidase B [EC:3.4.21.83]	gi|460375702|ref|XP_004233643.1|//PREDICTED: prolyl endopeptidase-like isoform X1 [Solanum lycopersicum];gi|723670495|ref|XP_010316165.1|//PREDICTED: prolyl endopeptidase-like isoform X2 [Solanum lycopersicum]
Solyc01g094870.2.1	1461	175.403233676238	86.4143168658957	-1.02133308636963	0.0167220363817257	Down	0.00328589902263934	NA	NA	NA	K15174//RNA polymerase II-associated factor 1;K14306//nuclear pore complex protein Nup62	gi|460368114|ref|XP_004229914.1|//PREDICTED: basic salivary proline-rich protein 2-like isoform X1 [Solanum lycopersicum];gi|723661244|ref|XP_010326565.1|//PREDICTED: basic salivary proline-rich protein 2-like isoform X2 [Solanum lycopersicum]
Solyc06g062900.3.1	512	5.17080292586631	36.8710408775823	2.83402791886962	0.0012118031176269	Up	0.000140738759372243	NA	NA	NA	K03126//transcription initiation factor TFIID subunit 12	gi|723710106|ref|XP_010322827.1|//PREDICTED: transcription initiation factor TFIID subunit 12b-like [Solanum lycopersicum]
Solyc09g072690.1.1	1707	384.502966591934	87.4150846659016	-2.13704056615025	4.45334123724104e-08	Down	1.3520866736093e-09	NA	NA	NA	K13754//solute carrier family 24 (sodium/potassium/calcium exchanger), member 6	gi|460404071|ref|XP_004247508.1|//PREDICTED: cation/calcium exchanger 1 [Solanum lycopersicum]
Solyc08g081220.1.1	2043	141.425402626719	65.8207820365749	-1.10342620545211	0.00550509168163565	Down	0.000863044282820759	NA	GO:0005506//iron ion binding;GO:0016712//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen	GO:0008152//metabolic process	K15398//fatty acid omega-hydroxylase [EC:1.14.-.-];K20544	gi|460400139|ref|XP_004245593.1|//PREDICTED: cytochrome P450 86A7 [Solanum lycopersicum];gi|697112473|ref|XP_009610115.1|//PREDICTED: cytochrome P450 86A7-like [Nicotiana tomentosiformis]
Solyc11g018580.2.1	1129	1829.63353243441	4420.76847112813	1.27274246605409	1.74938615758908e-08	Up	4.92960960133266e-10	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K01897//long-chain acyl-CoA synthetase [EC:6.2.1.3]	gi|460409939|ref|XP_004250394.1|//PREDICTED: long chain acyl-CoA synthetase 9, chloroplastic [Solanum lycopersicum];gi|697096895|ref|XP_009618620.1|//PREDICTED: long chain acyl-CoA synthetase 9, chloroplastic [Nicotiana tomentosiformis]
Solyc01g098520.3.1	4580	1156.75809556682	2475.19534725866	1.09745519436637	6.93114401064318e-07	Up	2.73282126529498e-08	NA	NA	NA	K01937//CTP synthase [EC:6.3.4.2];K13429//chitin elicitor receptor kinase 1;K08145//MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8	gi|723671039|ref|XP_010316212.1|//PREDICTED: CTP synthase 2 isoform X2 [Solanum lycopersicum];gi|971576469|ref|XP_015170993.1|//PREDICTED: uncharacterized protein LOC102601222 [Solanum tuberosum];gi|970008609|ref|XP_015065171.1|//PREDICTED: chitin elicitor receptor kinase 1-like [Solanum pennellii];gi|697097928|ref|XP_009624094.1|//PREDICTED: CTP synthase-like [Nicotiana tomentosiformis];gi|985482426|ref|NP_001306259.1|//sugar transporter ERD6-like 5 [Solanum lycopersicum];gi|723671028|ref|XP_010316209.1|//PREDICTED: CTP synthase 2 isoform X1 [Solanum lycopersicum]
Solyc11g071940.1.1	808	68.1973694364222	195.653662716852	1.52051412168845	2.79289284682716e-06	Up	1.30187894553004e-07	NA	NA	NA	K13161//heterogeneous nuclear ribonucleoprotein R;K09528//DnaJ homolog subfamily C member 8	gi|460411667|ref|XP_004251227.1|//PREDICTED: protein FAF-like, chloroplastic [Solanum lycopersicum]
Solyc01g091590.3.1	783	5605.91163122278	510.455318227722	-3.45709241455739	1.94188383357663e-104	Down	2.19174247582012e-108	NA	NA	NA	NA	gi|723660734|ref|XP_004231169.2|//PREDICTED: BON1-associated protein 2 [Solanum lycopersicum]
Solyc04g008900.3.1	1408	164.711941719815	23.0923392467867	-2.83445892497134	4.40842739097342e-05	Down	2.99036666137136e-06	NA	NA	NA	K06997//PLP dependent protein;K07393//putative glutathione S-transferase	gi|460382267|ref|XP_004236861.1|//PREDICTED: putative UPF0481 protein At3g02645 isoform X1 [Solanum lycopersicum]
Solyc01g067460.2.1	638	17.1653499896451	62.3027666330409	1.85979695621545	6.82008846469236e-05	Up	4.9316064819935e-06	NA	NA	NA	K03676//glutaredoxin 3	gi|460366687|ref|XP_004229211.1|//PREDICTED: monothiol glutaredoxin-S3 [Solanum lycopersicum]
Solyc03g117960.3.1	3749	801.559979910139	262.103741916177	-1.61267252940181	6.24269481100926e-06	Down	3.23643094415755e-07	NA	NA	NA	K10862//tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]	gi|723688373|ref|XP_010319088.1|//PREDICTED: uncharacterized protein LOC101248663 [Solanum lycopersicum]
Solyc02g071880.3.1	2664	198.421371217836	451.011364930158	1.18459636673714	0.000177858243886426	Up	1.49888061063053e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|723675350|ref|XP_010316862.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase RFK1 isoform X1 [Solanum lycopersicum];gi|723675353|ref|XP_010316863.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase RFK1 isoform X2 [Solanum lycopersicum]
Solyc03g116030.3.1	1404	2785.95876579773	6678.17873670601	1.26128080145644	1.35358428100024e-06	Up	5.80034799119364e-08	NA	NA	NA	K10661//E3 ubiquitin-protein ligase MARCH6 [EC:2.3.2.27]	gi|460380488|ref|XP_004235988.1|//PREDICTED: uncharacterized protein LOC101260808 [Solanum lycopersicum]
Solyc09g064890.3.1	3520	870.40766540136	351.978047779524	-1.3062058085527	1.13973327303507e-05	Down	6.4490550889569e-07	NA	NA	NA	K01051//pectinesterase [EC:3.1.1.11]	gi|460403680|ref|XP_004247316.1|//PREDICTED: uncharacterized protein LOC101258484 [Solanum lycopersicum];gi|697146964|ref|XP_009627637.1|//PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Nicotiana tomentosiformis]
Solyc01g110670.3.1	1137	15.8204349598641	75.0369995225213	2.24581287532041	0.000229251982246283	Up	2.00789546527219e-05	NA	NA	NA	K14488//SAUR family protein	gi|723666146|ref|XP_010315346.1|//PREDICTED: auxin-induced protein 15A-like [Solanum lycopersicum]
Solyc08g022240.1.1	1449	97.8790138633877	38.3803793473313	-1.35063059521774	0.000453159325082386	Down	4.43952927958816e-05	NA	NA	NA	K16818//phospholipase A1 [EC:3.1.1.32]	gi|460398633|ref|XP_004244860.1|//PREDICTED: phospholipase A1-Igamma1, chloroplastic [Solanum lycopersicum]
BGI_novel_G000200	571	54.5919338769787	194.248533171479	1.83114399499752	7.15835693289356e-10	Up	1.51892901059141e-11	NA	NA	NA	K02183//calmodulin	gi|697148846|ref|XP_009628614.1|//PREDICTED: probable calcium-binding protein CML10 [Nicotiana tomentosiformis]
Solyc07g056530.3.1	1636	107.9321022119	48.7171021678013	-1.14762380370075	0.00349121040198637	Down	0.000502534650037617	NA	NA	NA	K15285//solute carrier family 35, member E3;K15280//solute carrier family 35, member C2	gi|460395235|ref|XP_004243190.1|//PREDICTED: probable sugar phosphate/phosphate translocator At3g14410 [Solanum lycopersicum]
Solyc06g075800.1.1	441	1372.90868276139	524.301192316491	-1.38876793787645	0.00181856815285911	Down	0.000227834159105374	GO:0043231//intracellular membrane-bounded organelle;GO:0000785//chromatin	GO:0003676//nucleic acid binding	GO:0034728//nucleosome organization	K11252//histone H2B	gi|1000940412|ref|XP_002532620.2|//PREDICTED: probable histone H2B.3 [Ricinus communis]
Solyc06g083680.3.1	762	1972.31660104627	4262.58000553765	1.11183575751784	0.00388186004163	Up	0.000569573143805756	GO:0009522//photosystem I;GO:0009507//chloroplast	NA	NA	K02693//photosystem I subunit IV	gi|460393564|ref|XP_004242379.1|//PREDICTED: photosystem I reaction center subunit IV A, chloroplastic [Solanum lycopersicum]
Solyc08g061880.2.1	1124	17.12473854663	46.5935706240134	1.44404893154281	0.0192282469162074	Up	0.00390352221067927	GO:0044439//peroxisomal part	GO:0046914//transition metal ion binding	GO:0006996//organelle organization	K13346//peroxin-10	gi|970043990|ref|XP_015083402.1|//PREDICTED: peroxisome biogenesis factor 10 [Solanum pennellii]
Solyc08g005210.3.1	678	125.470994714272	251.887622130488	1.00542633602549	5.67815002906106e-05	Up	4.01401200323767e-06	NA	NA	NA	K09658//dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit	gi|460397696|ref|XP_004244403.1|//PREDICTED: dolichol phosphate-mannose biosynthesis regulatory protein [Solanum lycopersicum]
Solyc09g075460.3.1	1998	1063.58262307547	399.073623578249	-1.41420527815053	0.000232343700624141	Down	2.03934482150535e-05	NA	GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds	GO:0044238//primary metabolic process;GO:0045229//external encapsulating structure organization	K01184//polygalacturonase [EC:3.2.1.15];K01213//galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]	gi|460403840|ref|XP_004247394.1|//PREDICTED: probable polygalacturonase [Solanum lycopersicum]
Solyc06g072430.2.1	897	647.020273501038	70.8537917139164	-3.19089395221234	5.13699290069684e-24	Down	1.41083702690319e-26	NA	NA	NA	K01555//fumarylacetoacetase [EC:3.7.1.2]	gi|723710854|ref|XP_010322968.1|//PREDICTED: uncharacterized protein LOC104648101 [Solanum lycopersicum]
Solyc11g069220.2.1	1139	184.467316429136	398.491748624392	1.11118462639371	0.000351520433618353	Up	3.29566937764084e-05	NA	NA	NA	K08472//mlo protein	gi|723745749|ref|XP_010313404.1|//PREDICTED: LOW QUALITY PROTEIN: MLO-like protein 6 [Solanum lycopersicum]
Solyc01g087500.3.1	10142	1507.66089796453	255.009239214924	-2.56369055184554	5.3771723018656e-06	Down	2.72702342472341e-07	GO:0043232//intracellular non-membrane-bounded organelle	GO:0032559//adenyl ribonucleotide binding;GO:0003916//DNA topoisomerase activity;GO:0001071//nucleic acid binding transcription factor activity	GO:0006351//transcription, DNA-templated;GO:0006259//DNA metabolic process	K03164//DNA topoisomerase II [EC:5.99.1.3]	gi|723659967|ref|XP_010324649.1|//PREDICTED: DNA topoisomerase 2 isoform X1 [Solanum lycopersicum];gi|460367566|ref|XP_004229644.1|//PREDICTED: DNA topoisomerase 2 isoform X2 [Solanum lycopersicum]
Solyc01g008690.3.1	2011	406.394669681328	138.116464739024	-1.55699616746148	1.04773941286748e-06	Down	4.33995896752106e-08	NA	NA	NA	K15356//GDP-mannose transporter	gi|460365231|ref|XP_004228507.1|//PREDICTED: GDP-mannose transporter GONST1-like isoform X2 [Solanum lycopersicum];gi|723655239|ref|XP_010314777.1|//PREDICTED: GDP-mannose transporter GONST1-like isoform X1 [Solanum lycopersicum]
Solyc12g098450.2.1	3118	13.6906105874062	43.2421552855392	1.65925164123314	0.00148757042094553	Up	0.000179874015534949	NA	NA	NA	NA	gi|460415282|ref|XP_004252988.1|//PREDICTED: probable magnesium transporter NIPA2 isoform X1 [Solanum lycopersicum]
Solyc06g052050.3.1	2379	70.6893798556898	22.7783454381084	-1.63383052836549	0.00302205923075823	Down	0.000420791618248164	GO:0005788//endoplasmic reticulum lumen;GO:0044432//endoplasmic reticulum part	GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	GO:0008152//metabolic process;GO:0050896//response to stimulus	K09490//heat shock 70kDa protein 5	gi|970033399|ref|XP_015078003.1|//PREDICTED: luminal-binding protein 4-like [Solanum pennellii]
Solyc05g052850.3.1	1171	145.956707192027	53.6534972501896	-1.4437963918375	1.64945769892391e-06	Down	7.19853623307651e-08	NA	NA	NA	K09422//myb proto-oncogene protein, plant	gi|460388538|ref|XP_004239924.1|//PREDICTED: transcription factor MYB39 [Solanum lycopersicum]
Solyc09g074780.3.1	1948	56.1903477772516	27.4627102044944	-1.03284832222272	0.0386093095892718	Down	0.00926013350758494	NA	NA	NA	K14794//ribosomal RNA-processing protein 12;K12309//beta-galactosidase [EC:3.2.1.23]	gi|460404138|ref|XP_004247541.1|//PREDICTED: zinc finger protein NUTCRACKER-like [Solanum lycopersicum]
Solyc00g227860.1.1	1413	167.161243940523	55.711396941631	-1.5851960031372	7.12223108515107e-05	Down	5.18759946608445e-06	NA	GO:0016758//transferase activity, transferring hexosyl groups	NA	K18823//soyasaponin III rhamnosyltransferase [EC:2.4.1.273]	gi|723754839|ref|XP_004253507.2|//PREDICTED: UDP-glycosyltransferase 91A1-like [Solanum lycopersicum]
Solyc10g006800.3.1	2769	923.003650820112	2683.27231603769	1.53958521677787	1.92941998231639e-26	Up	3.99240402661405e-29	NA	NA	NA	K05391//cyclic nucleotide gated channel, other eukaryote	gi|460405631|ref|XP_004248279.1|//PREDICTED: cyclic nucleotide-gated ion channel 4-like [Solanum lycopersicum]
Solyc08g075760.3.1	2858	24.184336216219	51.6774266171538	1.09546128898201	0.0251547232922516	Up	0.00541233493259545	NA	NA	NA	NA	gi|536290943|ref|NP_001269245.1|//CYCLOPS [Solanum lycopersicum]
Solyc05g009930.3.1	7234	1106.67349789265	2691.44218292423	1.28214978769177	2.96344945258587e-11	Up	4.73839735646725e-13	GO:0009527//plastid outer membrane	NA	GO:0009658//chloroplast organization	K01551//arsenite-transporting ATPase [EC:3.6.3.16]	gi|723698105|ref|XP_010320785.1|//PREDICTED: protein CHUP1, chloroplastic [Solanum lycopersicum]
Solyc01g103860.3.1	3801	55.1000743908066	147.900925961511	1.42450491303029	0.00391676348928373	Up	0.000576167992592151	NA	NA	NA	NA	gi|723663909|ref|XP_010314626.1|//PREDICTED: COBRA-like protein 6 isoform X1 [Solanum lycopersicum];gi|723663912|ref|XP_010314628.1|//PREDICTED: COBRA-like protein 6 isoform X2 [Solanum lycopersicum]
Solyc06g074040.1.1	627	91.8418789213302	34.1991156492094	-1.42519313817038	0.0114983632159488	Down	0.00208294277218937	NA	NA	NA	NA	gi|460391465|ref|XP_004241341.1|//PREDICTED: protein YLS9 [Solanum lycopersicum]
Solyc08g078640.2.1	2060	63.5153422468174	5.89085361632381	-3.43055651102459	0.000202788453888996	Down	1.74093459956827e-05	NA	NA	NA	K01051//pectinesterase [EC:3.1.1.11]	gi|460400489|ref|XP_004245767.1|//PREDICTED: probable pectinesterase 68 [Solanum lycopersicum]
Solyc06g084483.1.1	4405	31.3536416678393	90.5188302853217	1.52958492260008	0.0212471716180839	Up	0.0044085083323451	NA	NA	NA	K14485//transport inhibitor response 1	gi|460393442|ref|XP_004242318.1|//PREDICTED: uncharacterized protein LOC101248116 [Solanum lycopersicum]
Solyc06g009760.1.1	492	96.3925015551133	5.91660523813674	-4.02607937714767	2.1392373026086e-08	Down	6.10060901195378e-10	NA	NA	NA	NA	gi|697181435|ref|XP_009599710.1|//PREDICTED: leucine-rich repeat extensin-like protein 1 [Nicotiana tomentosiformis]
Solyc01g088520.3.1	367	74.6512245403623	32.2524891320025	-1.2107554188958	0.0161470546193827	Down	0.00314412355612907	NA	GO:0032561//guanyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity	GO:0009207//purine ribonucleoside triphosphate catabolic process	K01528//dynamin GTPase [EC:3.6.5.5]	gi|661886962|emb|CDP09371.1|//unnamed protein product [Coffea canephora]
Solyc11g072640.2.1	491	1.5659307845422	67.7114140015204	5.43430669620985	4.66632537688965e-13	Up	5.51251380114127e-15	GO:0043231//intracellular membrane-bounded organelle	GO:0046914//transition metal ion binding;GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	GO:0008152//metabolic process	K07512//mitochondrial trans-2-enoyl-CoA reductase [EC:1.3.1.38]	gi|460411775|ref|XP_004251281.1|//PREDICTED: probable trans-2-enoyl-CoA reductase, mitochondrial [Solanum lycopersicum]
Solyc08g023570.2.1	2442	33.9243128885578	99.9727638504304	1.55921551155127	3.39993357284898e-05	Up	2.2404680358677e-06	NA	NA	NA	K15361//WD repeat-containing protein 48	gi|698543626|ref|XP_009766804.1|//PREDICTED: uncharacterized protein LOC104218101 [Nicotiana sylvestris];gi|723721619|ref|XP_010324800.1|//PREDICTED: LOW QUALITY PROTEIN: WD repeat-containing protein 48 homolog [Solanum lycopersicum]
Solyc02g078810.3.1	2251	141.189031280931	522.698258561865	1.88835034016862	1.99640452529751e-16	Up	1.37449972960664e-18	NA	NA	NA	K11723//bromodomain-containing protein 7/9	gi|460374051|ref|XP_004232825.1|//PREDICTED: uncharacterized protein LOC101260987 [Solanum lycopersicum]
BGI_novel_G000267	555	29.7921777899126	224.268496534229	2.91222148358363	5.79260949641641e-14	Up	5.62262321322586e-16	NA	NA	NA	NA	gi|971579743|ref|XP_015159046.1|//PREDICTED: uncharacterized protein LOC107058170 [Solanum tuberosum]
Solyc03g007990.2.1	1702	5105.69707996125	2312.76955508393	-1.14248642280753	5.38040511560557e-07	Down	2.06876374271967e-08	NA	NA	NA	NA	gi|460376884|ref|XP_004234226.1|//PREDICTED: uncharacterized protein LOC101266602 [Solanum lycopersicum]
BGI_novel_G000192	1396	32.615998879231	83.8581631254062	1.36237141659295	0.0272676335197911	Up	0.00598800514879687	NA	NA	NA	K05747//Wiskott-Aldrich syndrome protein	gi|723696499|ref|XP_010320498.1|//PREDICTED: LOW QUALITY PROTEIN: extensin-3-like [Solanum lycopersicum]
Solyc12g005190.2.1	1582	147.511376385936	17.8612936497729	-3.04591774219884	2.13480047988032e-09	Down	4.90731035818991e-11	NA	NA	NA	K17508//protein phosphatase PTC7 [EC:3.1.3.16]	gi|460412168|ref|XP_004251474.1|//PREDICTED: probable protein phosphatase 2C 55 [Solanum lycopersicum]
Solyc08g075032.1.1	2537	161.960474955741	419.977797339427	1.37467128110293	1.07565082076928e-06	Up	4.48390184128052e-08	NA	NA	NA	NA	gi|460400215|ref|XP_004245631.1|//PREDICTED: uncharacterized protein LOC101265850 [Solanum lycopersicum]
Solyc03g120730.3.1	3815	363.171987505119	776.379750746223	1.09610956297346	1.2211084252438e-06	Up	5.16530495641816e-08	GO:0016021//integral component of membrane	NA	NA	K11996//adenylyltransferase and sulfurtransferase [EC:2.7.7.80]	gi|460379840|ref|XP_004235668.1|//PREDICTED: uncharacterized protein LOC101262796 [Solanum lycopersicum]
Solyc07g006870.3.1	1357	25.524510982715	90.5382955196382	1.82664482540333	0.00560648756422899	Up	0.000882947966285273	NA	NA	NA	K08235//xyloglucan:xyloglucosyl transferase [EC:2.4.1.207]	gi|460394190|ref|XP_004242687.1|//PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 25 [Solanum lycopersicum]
Solyc08g068090.3.1	849	32.8174145951434	134.436781643722	2.03439441992497	2.59678578715965e-06	Up	1.20069591136915e-07	NA	GO:0005506//iron ion binding	GO:0015669//gas transport	NA	gi|460399447|ref|XP_004245252.1|//PREDICTED: two-on-two hemoglobin-3-like [Solanum lycopersicum]
Solyc04g064760.3.1	2011	246.983588967895	102.284652346715	-1.27182549673898	0.037477695614892	Down	0.00893232512115655	NA	GO:0004180//carboxypeptidase activity	GO:0019538//protein metabolic process	K16297//serine carboxypeptidase-like clade II [EC:3.4.16.-]	gi|460384063|ref|XP_004237734.1|//PREDICTED: serine carboxypeptidase-like 42 [Solanum lycopersicum]
Solyc12g055920.2.1	983	25.0356459081426	69.3742408609316	1.47041640273822	0.0133397821752672	Up	0.00249029342188396	NA	GO:0046872//metal ion binding	NA	K06268//serine/threonine-protein phosphatase 2B regulatory subunit	gi|460414596|ref|XP_004252654.1|//PREDICTED: calcineurin B-like protein 4 isoform X1 [Solanum lycopersicum];gi|723752048|ref|XP_010314505.1|//PREDICTED: calcineurin B-like protein 4 isoform X2 [Solanum lycopersicum]
Solyc10g006970.3.1	792	551.766007439769	2227.41586759157	2.01324245564036	1.52038072669782e-14	Up	1.36136423233288e-16	NA	NA	NA	K03671//thioredoxin 1	gi|460405609|ref|XP_004248268.1|//PREDICTED: thioredoxin M-type, chloroplastic-like [Solanum lycopersicum]
Solyc09g007190.3.1	856	595.417168178632	1257.45092256501	1.07852936798219	1.2993817107318e-06	Up	5.53874897764908e-08	NA	GO:0003824//catalytic activity	NA	K10878//meiotic recombination protein SPO11;K15717//prostamide/prostaglandin F2alpha synthase [EC:1.11.1.20]	gi|460402416|ref|XP_004246708.1|//PREDICTED: thioredoxin-like protein AAED1, chloroplastic isoform X1 [Solanum lycopersicum]
Solyc12g017480.2.1	1731	513.541177056412	1037.92778236095	1.01515420107522	0.00188155814261886	Up	0.000238344855763646	NA	NA	NA	K19613//leucine-rich repeat protein SHOC2	gi|460413169|ref|XP_004251967.1|//PREDICTED: plant intracellular Ras-group-related LRR protein 6 [Solanum lycopersicum]
Solyc08g076730.3.1	1320	1689.5829706397	798.233913029898	-1.08178372063832	0.00838253611382153	Down	0.00142862635799893	NA	NA	NA	NA	gi|460400776|ref|XP_004245908.1|//PREDICTED: uncharacterized protein LOC101247449 [Solanum lycopersicum]
Solyc04g080200.3.1	2833	425.61646065847	141.41756954099	-1.58959257805175	2.8350236828821e-13	Down	3.16780298651612e-15	NA	NA	NA	NA	gi|723695704|ref|XP_010320381.1|//PREDICTED: uncharacterized protein LOC101266938 isoform X1 [Solanum lycopersicum];gi|460385818|ref|XP_004238598.1|//PREDICTED: uncharacterized protein LOC101266938 isoform X2 [Solanum lycopersicum]
Solyc09g025310.3.1	1304	104.229879713695	40.6355982018371	-1.35895287852338	0.0112353586543692	Down	0.00202430897651521	NA	NA	NA	K12581//CCR4-NOT transcription complex subunit 7/8;K13126//polyadenylate-binding protein;K05941//glutathione gamma-glutamylcysteinyltransferase [EC:2.3.2.15];K01054//acylglycerol lipase [EC:3.1.1.23]	gi|460402908|ref|XP_004246952.1|//PREDICTED: NAC domain-containing protein 21/22-like [Solanum lycopersicum]
Solyc12g011290.2.1	3819	123.816132933787	38.5872843785887	-1.68200188501331	0.00919906183837886	Down	0.00159824181977553	NA	NA	NA	K10406//kinesin family member C2/C3	gi|460413443|ref|XP_004252098.1|//PREDICTED: uncharacterized protein LOC101255070 isoform X1 [Solanum lycopersicum]
Solyc04g082500.3.1	1931	2186.23011194683	8702.28768970465	1.99294945178676	1.13385527732823e-24	Up	2.94341663414778e-27	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004702//receptor signaling protein serine/threonine kinase activity	GO:0006464//cellular protein modification process	K00924;K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723696320|ref|XP_010320466.1|//PREDICTED: probable serine/threonine-protein kinase NAK isoform X2 [Solanum lycopersicum];gi|460385489|ref|XP_004238436.1|//PREDICTED: probable serine/threonine-protein kinase NAK isoform X1 [Solanum lycopersicum]
Solyc02g090505.1.1	2757	63.6813325404989	190.538455030705	1.58113976615697	0.000325441168883038	Up	3.0181056482193e-05	NA	NA	NA	NA	gi|969999284|ref|XP_015081908.1|//PREDICTED: high mobility group B protein 10-like [Solanum pennellii]
Solyc02g030480.3.1	1616	144.367791148431	63.6291511802831	-1.18198912776645	0.038999514199079	Down	0.00939040221497765	NA	GO:0016616//oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;GO:0046914//transition metal ion binding	GO:0008152//metabolic process	K00083//cinnamyl-alcohol dehydrogenase [EC:1.1.1.195]	gi|460371508|ref|XP_004231578.1|//PREDICTED: probable cinnamyl alcohol dehydrogenase 6 [Solanum lycopersicum]
Solyc06g082080.3.1	1625	995.392710105531	302.511336244269	-1.71827661463783	9.33945370992754e-08	Down	3.04287694236164e-09	GO:0043234//protein complex	GO:0043169//cation binding;GO:0004721//phosphoprotein phosphatase activity	GO:0006464//cellular protein modification process	K17506//protein phosphatase 1L [EC:3.1.3.16]	gi|460393842|ref|XP_004242517.1|//PREDICTED: probable protein phosphatase 2C 25 [Solanum lycopersicum]
BGI_novel_G000385	813	251.23650347466	90.2771396570982	-1.4766134822345	0.00805651688184732	Down	0.00136306081330577	NA	NA	NA	K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6];K02350//DNA polymerase zeta [EC:2.7.7.7];K03549//KUP system potassium uptake protein;K12447//UDP-sugar pyrophosphorylase [EC:2.7.7.64];K05658//ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:3.6.3.44]	gi|15144516|gb|AAK84483.1|//putative copia-like polyprotein [Solanum lycopersicum]
Solyc02g022850.1.1	1626	1391.34981290169	2790.92592172351	1.00425864451975	1.33679069155167e-05	Up	7.70993276955874e-07	NA	GO:0016491//oxidoreductase activity	NA	NA	gi|460371465|ref|XP_004231557.1|//PREDICTED: reticuline oxidase-like protein [Solanum lycopersicum]
Solyc08g007240.3.1	1655	2470.68087004654	834.177275812541	-1.56648275760262	5.76964727234547e-08	Down	1.79297541270029e-09	NA	NA	NA	NA	gi|460398013|ref|XP_004244559.1|//PREDICTED: nudix hydrolase 8 isoform X1 [Solanum lycopersicum]
Solyc12g015770.2.1	2483	1181.0195837552	434.003170783725	-1.44425539980419	6.3015694050516e-10	Down	1.32290283221174e-11	NA	NA	NA	K10999//cellulose synthase A [EC:2.4.1.12]	gi|971546038|ref|XP_015163069.1|//PREDICTED: cellulose synthase-like protein E6, partial [Solanum tuberosum];gi|723748842|ref|XP_010313949.1|//PREDICTED: cellulose synthase-like protein E6 isoform X1 [Solanum lycopersicum]
Solyc01g108020.3.1	543	305.967639223052	104.924382992828	-1.54402909433917	3.39993357284898e-05	Down	2.24103973650542e-06	NA	NA	NA	K03671//thioredoxin 1	gi|460369857|ref|XP_004230773.1|//PREDICTED: thioredoxin M3, chloroplastic [Solanum lycopersicum]
Solyc12g010230.2.1	1403	41.0667068901602	101.732750202986	1.30874302358735	0.00246769626168181	Up	0.000328840487542399	NA	NA	NA	K14772//U3 small nucleolar RNA-associated protein 20	gi|460412757|ref|XP_004251764.1|//PREDICTED: uncharacterized protein LOC101246218 [Solanum lycopersicum]
Solyc02g092000.3.1	1231	2102.92463768111	4271.31605641395	1.02228350501334	0.00218628944827421	Up	0.000284627506112022	GO:0016021//integral component of membrane	NA	NA	K01188//beta-glucosidase [EC:3.2.1.21]	gi|460372265|ref|XP_004231951.1|//PREDICTED: uncharacterized protein At3g49720 [Solanum lycopersicum]
Solyc03g097680.3.1	1731	405.859805841515	995.250982078275	1.29407891951585	0.00215538199207151	Up	0.000280248313190336	GO:0043231//intracellular membrane-bounded organelle	GO:0016616//oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;GO:0000166//nucleotide binding;GO:0004738//pyruvate dehydrogenase activity;GO:0048037//cofactor binding	GO:0006007//glucose catabolic process	K00162//pyruvate dehydrogenase E1 component beta subunit [EC:1.2.4.1]	gi|970017233|ref|XP_015069743.1|//PREDICTED: pyruvate dehydrogenase E1 component subunit beta-1, mitochondrial-like [Solanum pennellii]
Solyc09g007880.1.1	180	16.1388784191768	49.2680424099888	1.61011182835559	0.00267730539375628	Up	0.000363219083893346	NA	NA	NA	NA	NA
Solyc04g081690.2.1	3640	1485.82392125153	425.192194272504	-1.80507614121764	7.74232437467369e-17	Down	5.15572390638541e-19	NA	NA	NA	K08596//sentrin-specific protease 7 [EC:3.4.22.68];K05868//cyclin B	gi|971574689|ref|XP_015170525.1|//PREDICTED: uncharacterized protein LOC107063325 [Solanum tuberosum];gi|565350348|ref|XP_006342132.1|//PREDICTED: G2/mitotic-specific cyclin-2-like [Solanum tuberosum]
Solyc03g096935.1.1	2502	1025.83912642985	491.24162052233	-1.06229979960806	3.68217271012326e-05	Down	2.45062585560875e-06	NA	GO:0046914//transition metal ion binding	NA	K10601//E3 ubiquitin-protein ligase synoviolin [EC:2.3.2.27]	gi|460379123|ref|XP_004235314.1|//PREDICTED: E3 ubiquitin-protein ligase synoviolin [Solanum lycopersicum]
Solyc02g093610.3.1	538	60.0346136148886	20.4869401037412	-1.55109002041364	0.00166834060927606	Down	0.000206000522183748	NA	NA	NA	K09555	gi|460372006|ref|XP_004231825.1|//PREDICTED: BAG family molecular chaperone regulator 3 [Solanum lycopersicum]
Solyc02g062960.3.1	677	35.2705524588397	7.36746328885049	-2.25922430182465	0.00861150545064114	Down	0.00147672091211521	NA	GO:0003677//DNA binding	GO:0006351//transcription, DNA-templated	K09338//homeobox-leucine zipper protein	gi|460375428|ref|XP_004233508.1|//PREDICTED: homeobox-leucine zipper protein ATHB-40-like [Solanum lycopersicum]
Solyc01g091490.3.1	947	415.877327144176	149.867888186698	-1.47246674030525	3.11600624357731e-05	Down	2.0316173138147e-06	NA	NA	NA	NA	gi|460367934|ref|XP_004229825.1|//PREDICTED: uncharacterized protein LOC101256125 [Solanum lycopersicum]
Solyc04g064720.3.1	2050	306.358146829959	781.281719990493	1.35062364248474	1.81720332407449e-10	Up	3.45938631294842e-12	GO:0016021//integral component of membrane	NA	NA	NA	gi|460384056|ref|XP_004237731.1|//PREDICTED: maltose excess protein 1-like, chloroplastic [Solanum lycopersicum]
Solyc09g090340.2.1	4194	397.918303158788	164.20743448666	-1.27695281403366	6.20807831250655e-05	Down	4.44234949224509e-06	NA	NA	NA	NA	gi|460404932|ref|XP_004247932.1|//PREDICTED: uncharacterized protein LOC101263160 [Solanum lycopersicum]
Solyc09g005630.3.1	1786	29.4014987515101	6.24406885331855	-2.23533134770421	0.00530515351209893	Down	0.000825911408316981	NA	NA	NA	K04427//mitogen-activated protein kinase kinase kinase 7 [EC:2.7.11.25];K16573//gamma-tubulin complex component 6	gi|460402500|ref|XP_004246750.1|//PREDICTED: protein trichome birefringence-like 3 [Solanum lycopersicum]
Solyc03g113510.2.1	1208	25.4800876970439	59.6255768661613	1.22656107593458	0.0204053362576059	Up	0.00419622151934062	NA	NA	NA	NA	gi|460380855|ref|XP_004236169.1|//PREDICTED: uncharacterized protein LOC101264914 [Solanum lycopersicum]
Solyc12g005120.2.1	842	174.828724118727	421.573963542459	1.26984353158903	1.4264604666541e-08	Up	3.93376795356454e-10	NA	NA	NA	NA	gi|460413290|ref|XP_004252023.1|//PREDICTED: uncharacterized protein LOC101252754 [Solanum lycopersicum]
Solyc03g111100.1.1	933	2805.91195164842	1352.4363881477	-1.05290900001756	8.75087769142288e-07	Down	3.53261541117259e-08	NA	NA	NA	NA	gi|460381214|ref|XP_004236347.1|//PREDICTED: uncharacterized protein LOC101267981 [Solanum lycopersicum]
Solyc10g006130.1.1	666	4042.33568487385	2010.10730986271	-1.00791660947565	2.05258718741159e-05	Down	1.2502402770577e-06	NA	NA	GO:0009987//cellular process	K09286//EREBP-like factor	gi|460405824|ref|XP_004248374.1|//PREDICTED: ethylene-responsive transcription factor 3-like [Solanum lycopersicum]
Solyc10g086660.2.1	2598	144.372991299285	54.5584620751283	-1.40392599151778	0.036393630348408	Down	0.00860275317829373	NA	NA	NA	K10418//dynein light chain LC8-type;K20826	gi|460408295|ref|XP_004249581.1|//PREDICTED: rop guanine nucleotide exchange factor 7 isoform X2 [Solanum lycopersicum]
Solyc01g091430.2.1	4629	45.332632387892	117.200383188973	1.37035544310246	0.00313797343915232	Up	0.000440591304549151	NA	GO:0005488//binding	NA	K10885//ATP-dependent DNA helicase 2 subunit 2	gi|460367924|ref|XP_004229820.1|//PREDICTED: pentatricopeptide repeat-containing protein At1g01970 [Solanum lycopersicum];gi|969996021|ref|XP_015089694.1|//PREDICTED: ATP-dependent DNA helicase 2 subunit KU80 [Solanum pennellii]
Solyc09g098100.3.1	4902	250.457138660523	81.8197842336927	-1.61404209480749	2.23541615049762e-05	Down	1.39019672564807e-06	NA	NA	NA	K13453;K13457//disease resistance protein RPM1	gi|15418712|gb|AAG31015.1|//tospovirus resistance protein C [Solanum lycopersicum]
Solyc03g083480.3.1	1174	1628.75418791699	555.287142745834	-1.55246299139699	4.72129665377861e-21	Down	1.8828346324324e-23	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460378377|ref|XP_004234949.1|//PREDICTED: putative RING-H2 finger protein ATL21A [Solanum lycopersicum]
Solyc08g068710.1.1	705	4050.61565228419	1498.69672056135	-1.43443273360006	1.77846419234417e-06	Down	7.86860003836248e-08	NA	GO:0016407//acetyltransferase activity	NA	NA	gi|460399514|ref|XP_004245284.1|//PREDICTED: tyramine N-feruloyltransferase 4/11-like [Solanum lycopersicum]
Solyc09g010920.1.1	2286	138.187946897724	12.3550928768463	-3.4834540247223	3.57392511274392e-15	Down	2.83708878400664e-17	NA	NA	NA	K14494//DELLA protein	gi|723727397|ref|XP_010325850.1|//PREDICTED: scarecrow-like protein 9 [Solanum lycopersicum]
Solyc01g112150.3.1	1863	995.713149136771	489.70480178388	-1.0238178397166	0.00356656418845061	Down	0.000514588926362231	NA	NA	NA	K19998//sec1 family domain-containing protein 1	gi|460370501|ref|XP_004231091.1|//PREDICTED: SEC1 family transport protein SLY1 [Solanum lycopersicum]
Solyc12g015870.2.1	3180	21298.3168882744	8739.24791481919	-1.28515839091331	1.49667877965679e-10	Down	2.79853029905728e-12	GO:0044424//intracellular part	GO:0005515//protein binding;GO:0032559//adenyl ribonucleotide binding;GO:0005509//calcium ion binding	GO:0044267//cellular protein metabolic process;GO:0050896//response to stimulus	K06268//serine/threonine-protein phosphatase 2B regulatory subunit;K04079//molecular chaperone HtpG	gi|460413118|ref|XP_004251942.1|//PREDICTED: calcineurin B-like protein 3 [Solanum lycopersicum];gi|350535174|ref|NP_001234436.1|//molecular chaperone Hsp90-1 [Solanum lycopersicum]
Solyc01g111275.1.1	737	76.9275019688412	176.215891340423	1.19577266768063	0.0432834717520879	Up	0.0106844893797727	NA	NA	NA	K09250//cellular nucleic acid-binding protein;K18754//protein lin-28	gi|460370351|ref|XP_004231016.1|//PREDICTED: glycine-rich protein 2-like [Solanum lycopersicum];gi|971572600|ref|XP_015170000.1|//PREDICTED: glycine-rich protein 2-like [Solanum tuberosum]
Solyc07g056650.3.1	1726	124.252484301156	34.2414709932703	-1.85945811177992	0.0471517340541174	Down	0.0119582332302034	NA	NA	NA	K10352//myosin heavy chain;K03231//elongation factor 1-alpha;K20478//golgin subfamily B member 1	gi|460395220|ref|XP_004243183.1|//PREDICTED: interactor of constitutive active ROPs 4 [Solanum lycopersicum]
Solyc03g112700.1.1	993	2418.47738748731	459.244720627469	-2.39676400714631	9.876039580177e-36	Down	1.11467715351885e-38	NA	NA	NA	NA	gi|460380973|ref|XP_004236227.1|//PREDICTED: uncharacterized protein LOC101256758 [Solanum lycopersicum]
Solyc06g068530.1.1	225	57.4243050671432	116.171143210757	1.01651835158952	0.0051905787937288	Up	0.000804363959795671	NA	NA	NA	NA	NA
Solyc03g062710.3.1	4222	252.159127792839	663.316883684301	1.39536379816993	0.00249022344641294	Up	0.000332498232179064	NA	NA	NA	NA	gi|460378075|ref|XP_004234804.1|//PREDICTED: uncharacterized protein LOC101262788 [Solanum lycopersicum]
Solyc12g096770.1.1	1326	911.812602028539	279.905980976827	-1.70379503414891	0.00112637875467499	Down	0.000129492590782904	NA	NA	NA	K13065//shikimate O-hydroxycinnamoyltransferase [EC:2.3.1.133]	gi|460415372|ref|XP_004253033.1|//PREDICTED: acetyl-CoA-benzylalcohol acetyltransferase-like [Solanum lycopersicum]
Solyc02g067660.3.1	2305	1123.53620733989	2393.85670147303	1.09129017588218	3.5118995246837e-05	Up	2.32409001652319e-06	NA	NA	NA	K18875//enhanced disease susceptibility 1 protein	gi|460375082|ref|XP_004233337.1|//PREDICTED: senescence-associated carboxylesterase 101 isoform X2 [Solanum lycopersicum];gi|723676807|ref|XP_010317094.1|//PREDICTED: senescence-associated carboxylesterase 101 isoform X1 [Solanum lycopersicum]
Solyc06g035700.1.1	537	347.295298596411	772.338545057685	1.1530704928672	0.0177604112189284	Up	0.00354673674755726	NA	NA	NA	K09286//EREBP-like factor	gi|460390231|ref|XP_004240742.1|//PREDICTED: ethylene-responsive transcription factor ERF025-like [Solanum lycopersicum]
Solyc07g007280.3.1	811	55.9901886539592	132.862666561555	1.24668982859009	0.037244680117707	Up	0.00886137535983368	NA	NA	NA	NA	gi|460394250|ref|XP_004242717.1|//PREDICTED: uncharacterized protein LOC101254005 [Solanum lycopersicum]
Solyc07g008200.3.1	1429	169.045261388231	397.708311692279	1.23430113756663	2.43246601524747e-09	Up	5.63731777800016e-11	NA	NA	NA	K15014//solute carrier family 29 (equilibrative nucleoside transporter), member 1/2/3	gi|460394907|ref|XP_004243031.1|//PREDICTED: equilibrative nucleotide transporter 8 [Solanum lycopersicum]
Solyc03g025925.1.1	2100	545.195371922459	136.773903972091	-1.99498032055123	6.59245249604466e-20	Down	3.10028804366284e-22	NA	NA	NA	NA	gi|565373524|ref|XP_006353321.1|//PREDICTED: F-box/LRR-repeat protein At3g48880-like isoform X1 [Solanum tuberosum]
Solyc02g014450.2.1	2867	32.488017317342	7.34926082560656	-2.14423664249567	0.00101951630027831	Down	0.000114916133771024	NA	NA	NA	K18469//TBC1 domain family member 5	gi|723667411|ref|XP_010315561.1|//PREDICTED: uncharacterized protein LOC101261558 isoform X2 [Solanum lycopersicum];gi|460371320|ref|XP_004231488.1|//PREDICTED: uncharacterized protein LOC101261558 isoform X1 [Solanum lycopersicum]
Solyc06g036290.3.1	3760	4065.66249854063	464.935127932448	-3.12838912103702	9.2368167622668e-20	Down	4.49086302388975e-22	GO:0044424//intracellular part	GO:0005515//protein binding;GO:0032559//adenyl ribonucleotide binding	GO:0044267//cellular protein metabolic process;GO:0050896//response to stimulus	K04079//molecular chaperone HtpG	gi|460390179|ref|XP_004240717.1|//PREDICTED: heat shock protein 83-like [Solanum lycopersicum]
Solyc01g107830.3.1	1444	876.257975821071	347.049097593373	-1.33621589316523	0.000120859607512736	Down	9.51367139500177e-06	NA	GO:0016757//transferase activity, transferring glycosyl groups	NA	K13496//UDP-glucosyl transferase 73C [EC:2.4.1.-]	gi|460369831|ref|XP_004230760.1|//PREDICTED: scopoletin glucosyltransferase-like [Solanum lycopersicum]
Solyc07g008930.1.1	600	441.607543285449	1178.9958348202	1.416721900821	5.8301654559092e-06	Up	2.99625059704776e-07	NA	NA	NA	NA	gi|971576037|ref|XP_015170874.1|//PREDICTED: uncharacterized protein LOC107063476 [Solanum tuberosum]
Solyc11g011210.2.1	836	33.0882334065236	84.3571888036954	1.35019275057551	0.041978505310802	Up	0.0102780652035848	NA	NA	NA	K03860//phosphatidylinositol glycan, class Q;K20887	gi|350534694|ref|NP_001234666.1|//protein RSI-1 precursor [Solanum lycopersicum]
Solyc07g065450.3.1	2320	24.2096038640031	54.0135313156803	1.15774139934424	0.0463384456768855	Up	0.0116926995919816	GO:0031224//intrinsic component of membrane	GO:0005261//cation channel activity	GO:0034220//ion transmembrane transport;GO:0030001//metal ion transport	K05389//potassium channel subfamily K, other eukaryote	gi|460397015|ref|XP_004244064.1|//PREDICTED: two-pore potassium channel 1 [Solanum lycopersicum]
Solyc03g112880.1.1	1284	127.741590779747	40.7189476476072	-1.64945614019669	0.000541772008849726	Down	5.46867682371638e-05	NA	NA	NA	K19519//transforming growth factor-beta-induced protein	gi|460380943|ref|XP_004236212.1|//PREDICTED: fasciclin-like arabinogalactan protein 4 [Solanum lycopersicum]
Solyc01g087890.3.1	3307	1023.56710169513	393.521537951652	-1.37909118020242	0.000106308904250158	Down	8.19114506788274e-06	GO:0031224//intrinsic component of membrane	NA	NA	NA	gi|460367618|ref|XP_004229669.1|//PREDICTED: protein pns1 [Solanum lycopersicum]
Solyc04g015160.3.1	4154	1491.0548930727	637.365144613017	-1.22614134113131	1.18285236488057e-11	Down	1.76226311697782e-13	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723689042|ref|XP_010319216.1|//PREDICTED: C2 and GRAM domain-containing protein At1g03370 [Solanum lycopersicum]
Solyc02g085360.3.1	2065	253.540909200346	67.4794933888382	-1.90969749943085	7.35762232035286e-06	Down	3.93901300295791e-07	NA	NA	NA	K09587//steroid 22-alpha-hydroxylase [EC:1.14.13.-]	gi|902763327|ref|NP_001266259.2|//cytochrome P450 90B3 [Solanum lycopersicum]
Solyc10g079730.2.1	4701	96.4320261968054	27.8723462250796	-1.79067791177971	0.0417264988807692	Down	0.0101916565762864	GO:0043231//intracellular membrane-bounded organelle	NA	GO:0000087//mitotic M phase;GO:0051276//chromosome organization	K06677//condensin complex subunit 1	gi|723738339|ref|XP_010312109.1|//PREDICTED: condensin complex subunit 1 [Solanum lycopersicum]
Solyc01g087980.3.1	1183	2588.14604422377	915.276984233432	-1.49963872033726	2.68596221762225e-08	Down	7.80121456736034e-10	NA	NA	NA	NA	gi|698481732|ref|XP_009787835.1|//PREDICTED: protein BPS1, chloroplastic-like [Nicotiana sylvestris]
Solyc12g049400.2.1	2266	2659.43364814181	1247.00213683845	-1.09265510537045	0.0489690120940272	Down	0.0125720292900542	NA	NA	NA	K13464//jasmonate ZIM domain-containing protein	gi|460414089|ref|XP_004252407.1|//PREDICTED: protein TIFY 10A-like [Solanum lycopersicum]
Solyc09g065750.3.1	1107	18.7844575234213	6.01655143009232	-1.64253074863096	0.0297085811676902	Down	0.00664251685024766	NA	NA	NA	K17911//beta-carotene isomerase [EC:5.2.1.14]	gi|460403714|ref|XP_004247333.1|//PREDICTED: beta-carotene isomerase D27, chloroplastic [Solanum lycopersicum]
Solyc11g008420.2.1	734	296.046147005517	107.025415512087	-1.46786864081224	7.55729630496147e-10	Down	1.60926625606027e-11	NA	NA	NA	K03094//S-phase kinase-associated protein 1	gi|460409262|ref|XP_004250058.1|//PREDICTED: SKP1-like protein 11 [Solanum lycopersicum]
Solyc02g068300.3.1	2611	737.203771065022	344.41272550391	-1.09792500188363	3.69163349070143e-08	Down	1.10693449664749e-09	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460374962|ref|XP_004233277.1|//PREDICTED: probable L-type lectin-domain containing receptor kinase S.5 [Solanum lycopersicum]
Solyc07g064380.3.1	3613	2.40031730995348	113.503576093831	5.56336880667876	1.64012601042103e-20	Up	7.219516298693e-23	NA	NA	NA	K17302//coatomer subunit beta'	gi|723719103|ref|XP_010324434.1|//PREDICTED: uncharacterized protein LOC101267626 [Solanum lycopersicum]
Solyc09g082240.3.1	660	33.09970181524	108.291572385999	1.71003084651991	4.1127094441375e-06	Up	2.01767235333156e-07	NA	NA	NA	NA	gi|460404204|ref|XP_004247574.1|//PREDICTED: uncharacterized protein LOC101247959 [Solanum lycopersicum]
Solyc05g054170.3.1	4204	1347.16732501507	2922.45414182171	1.11725133467262	3.16650792414084e-06	Up	1.49271423211003e-07	NA	NA	GO:0006355//regulation of transcription, DNA-templated	K14494//DELLA protein	gi|460388327|ref|XP_004239819.1|//PREDICTED: scarecrow-like protein 13 [Solanum lycopersicum]
Solyc10g055760.2.1	1314	796.977722191356	2950.48233105324	1.8883395163564	1.42916519368245e-27	Up	2.58088522561165e-30	NA	NA	NA	K12581//CCR4-NOT transcription complex subunit 7/8;K13126//polyadenylate-binding protein;K01054//acylglycerol lipase [EC:3.1.1.23]	gi|460406371|ref|XP_004248638.1|//PREDICTED: protein FEZ [Solanum lycopersicum]
Solyc01g010390.3.1	2128	972.200701641079	380.440001546151	-1.35358522829066	0.000767543910836649	Down	8.19233286321886e-05	NA	GO:0015926//glucosidase activity;GO:0043167//ion binding	GO:0044238//primary metabolic process	K01188//beta-glucosidase [EC:3.2.1.21]	gi|460365025|ref|XP_004228406.1|//PREDICTED: beta-glucosidase 40 [Solanum lycopersicum]
Solyc04g082380.3.1	1148	497.172049660165	194.154091650193	-1.35654308103699	8.92948035623397e-08	Down	2.90258503678937e-09	NA	NA	NA	NA	gi|460385465|ref|XP_004238424.1|//PREDICTED: uncharacterized protein LOC101257560 [Solanum lycopersicum]
Solyc04g011690.3.1	2089	182.241476177915	374.849187281101	1.04045893600016	0.00762525100595168	Up	0.00127948154576917	NA	NA	NA	K20562	gi|460382002|ref|XP_004236729.1|//PREDICTED: cytochrome P450 CYP736A12-like [Solanum lycopersicum]
Solyc02g071875.1.1	3858	911.800471528788	142.27396239068	-2.68004649739854	1.30608677639491e-26	Down	2.60431148039617e-29	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|723675360|ref|XP_010316865.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase RFK1 [Solanum lycopersicum]
Solyc09g091540.1.1	1098	94.7634726986991	19.3102009230123	-2.29496789285941	0.00256945790574128	Down	0.000346364472395448	NA	GO:0016741//transferase activity, transferring one-carbon groups	GO:0006730//one-carbon metabolic process	K08241//jasmonate O-methyltransferase [EC:2.1.1.141]	gi|460404724|ref|XP_004247831.1|//PREDICTED: salicylate carboxymethyltransferase-like [Solanum lycopersicum]
Solyc04g082050.3.1	1225	35.9062726606265	132.50825831168	1.88377447219168	0.00571892180911569	Up	0.000904527738356748	NA	NA	NA	K18470//Rho GTPase-activating protein 1	gi|460385415|ref|XP_004238399.1|//PREDICTED: ganglioside-induced differentiation-associated protein 2-like [Solanum lycopersicum]
BGI_novel_G000331	1092	43.4139137863869	119.681671891143	1.46297284092631	0.000136371856486598	Up	1.09743943199711e-05	NA	NA	NA	NA	gi|970045439|ref|XP_015084164.1|//PREDICTED: uncharacterized protein LOC107027531 [Solanum pennellii]
Solyc01g108630.3.1	2853	108.464298075106	250.192539921454	1.20581852705428	0.000862242760214762	Up	9.4269279954255e-05	NA	GO:0005506//iron ion binding;GO:0016664//oxidoreductase activity, acting on other nitrogenous compounds as donors, iron-sulfur protein as acceptor;GO:0051540//metal cluster binding	GO:0008152//metabolic process	K00366//ferredoxin-nitrite reductase [EC:1.7.7.1]	gi|460369951|ref|XP_004230820.1|//PREDICTED: ferredoxin--nitrite reductase, chloroplastic [Solanum lycopersicum]
Solyc02g071440.3.1	2011	14.4689082379989	35.9127976382635	1.31154197821029	0.0216420790860676	Up	0.00451455806977662	NA	NA	NA	K05278//flavonol synthase [EC:1.14.11.23];K06892//feruloyl-CoA ortho-hydroxylase [EC:1.14.11.-]	gi|460374411|ref|XP_004233004.1|//PREDICTED: protein SRG1-like [Solanum lycopersicum]
Solyc08g068450.1.1	372	10.5277703890883	2.65577204405356	-1.98699670471376	0.0378881637447175	Down	0.00904440929120514	NA	NA	NA	NA	NA
Solyc08g061910.3.1	1306	117.254819050034	38.6077057477816	-1.6026864870251	0.00344724239827594	Down	0.000495297920203756	NA	NA	NA	NA	gi|723722142|ref|XP_010325010.1|//PREDICTED: uncharacterized protein LOC104648816 [Solanum lycopersicum]
Solyc08g083210.3.1	7276	76.7519875318318	27.6513762716912	-1.47285282183962	0.0487819468077432	Down	0.0125093208969743	NA	GO:0016798//hydrolase activity, acting on glycosyl bonds	GO:0044238//primary metabolic process	K01179//endoglucanase [EC:3.2.1.4]	gi|922959899|ref|NP_001234090.2|//endo-1,4-beta-glucanase precursor [Solanum lycopersicum]
Solyc01g057270.3.1	3958	4.1802612113561	19.5122663968093	2.22271636048433	0.00705789764505333	Up	0.00116639077302301	GO:0005634//nucleus	GO:0003677//DNA binding	NA	K14674//TAG lipase / steryl ester hydrolase / phospholipase A2 / LPA acyltransferase [EC:3.1.1.3 3.1.1.13 3.1.1.4 2.3.1.51]	gi|723656833|ref|XP_010318684.1|//PREDICTED: calmodulin-binding transcription factor SR4 isoform X1 [Solanum lycopersicum];gi|723656836|ref|XP_010318686.1|//PREDICTED: calmodulin-binding transcription factor SR4 isoform X2 [Solanum lycopersicum]
Solyc11g062440.2.1	2191	1286.25112565259	515.49640437516	-1.31913806984457	0.00208195620015419	Down	0.000269056416385615	NA	GO:0016682//oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor;GO:0046914//transition metal ion binding	GO:0008152//metabolic process	K00423//L-ascorbate oxidase [EC:1.10.3.3]	gi|460410969|ref|XP_004250887.1|//PREDICTED: L-ascorbate oxidase [Solanum lycopersicum]
Solyc02g085720.1.1	1122	7.55364768438052	1.29707881525295	-2.54190734979329	0.0090682981990744	Down	0.00157449948038858	NA	GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K13789//geranylgeranyl diphosphate synthase, type II [EC:2.5.1.1 2.5.1.10 2.5.1.29]	gi|460373131|ref|XP_004232376.1|//PREDICTED: geranylgeranyl pyrophosphate synthase, chloroplastic-like [Solanum lycopersicum]
Solyc12g011010.2.1	1673	675.160975137731	149.398785892901	-2.17606309354846	0.0297096490453063	Down	0.00664387336062078	NA	NA	NA	K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]	gi|460412857|ref|XP_004251814.1|//PREDICTED: protodermal factor 1-like [Solanum lycopersicum]
Solyc05g005950.3.1	2170	842.12269310309	339.321538594735	-1.31137743341943	0.0250773724106445	Down	0.00539191810860923	NA	NA	NA	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|992319548|ref|NP_001307053.1|//protein NRT1/ PTR FAMILY 1.2 [Solanum lycopersicum]
Solyc12g009520.2.1	2892	222.992605048452	626.07846444729	1.48934760909856	4.3000467795111e-06	Up	2.1191355934686e-07	NA	NA	NA	K13466//EIX receptor 1/2;K10406//kinesin family member C2/C3;K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|723747890|ref|XP_010313777.1|//PREDICTED: receptor-like protein 12 [Solanum lycopersicum]
Solyc05g051390.3.1	2985	4.20133488230891	19.3919990693585	2.20654184403786	0.00403500999481728	Up	0.000596143124516459	NA	NA	NA	K20478//golgin subfamily B member 1	gi|970028941|ref|XP_015075795.1|//PREDICTED: kinase-interacting protein 1-like [Solanum pennellii]
Solyc05g051400.3.1	1071	878.790129010308	3459.06058191615	1.97678971133716	5.91266876046491e-25	Up	1.46815702855788e-27	GO:0016020//membrane	NA	GO:0006810//transport	K15104//solute carrier family 25 (mitochondrial oxoglutarate transporter), member 11	gi|460388749|ref|XP_004240027.1|//PREDICTED: mitochondrial uncoupling protein 5-like [Solanum lycopersicum]
Solyc12g099260.2.1	2360	1252.09362223653	357.879306158264	-1.80679741072385	3.61208794693294e-10	Down	7.25679068345444e-12	NA	NA	NA	K01648//ATP citrate (pro-S)-lyase [EC:2.3.3.8]	gi|460415154|ref|XP_004252925.1|//PREDICTED: ATP-citrate synthase beta chain protein 2 [Solanum lycopersicum]
Solyc03g121530.3.1	1368	317.849414368177	638.130976642965	1.00550913783396	1.77660813251134e-09	Up	4.04382212253333e-11	NA	NA	NA	K11145//ribonuclease III family protein [EC:3.1.26.-]	gi|460379708|ref|XP_004235603.1|//PREDICTED: uncharacterized protein LOC101268172 [Solanum lycopersicum]
Solyc01g017530.1.1	603	352.843095273095	776.489995380507	1.13794055803859	0.000383852446998084	Up	3.66667179431202e-05	GO:0030529//intracellular ribonucleoprotein complex;GO:0009536//plastid	GO:0005198//structural molecule activity	GO:0010467//gene expression	K02967//small subunit ribosomal protein S2	gi|813424257|ref|YP_009132034.1|//ribosomal protein S2 (chloroplast) [Solanum neorickii]
Solyc08g014120.3.1	1287	286.400759931419	635.070127199211	1.14888058869562	3.38398436319832e-14	Up	3.17009821834605e-16	GO:0005634//nucleus	GO:0001228//transcriptional activator activity, RNA polymerase II transcription regulatory region sequence-specific binding;GO:0001046//core promoter sequence-specific DNA binding;GO:0046983//protein dimerization activity	GO:0045944//positive regulation of transcription from RNA polymerase II promoter	K05765//cofilin	gi|723720562|ref|XP_004244756.2|//PREDICTED: transcription factor bHLH113 [Solanum lycopersicum]
Solyc12g056600.3.1	1118	5381.36170163896	817.471835164661	-2.71873034846927	2.61961535136731e-25	Down	6.01190881991746e-28	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K09841//xanthoxin dehydrogenase [EC:1.1.1.288]	gi|982742413|ref|NP_001238797.2|//short-chain dehydrogenase-reductase [Solanum lycopersicum]
Solyc06g051140.3.1	2493	463.161469996752	948.950986078395	1.03481833129218	0.00328331922264559	Up	0.000465281969484793	NA	NA	NA	K00278//L-aspartate oxidase [EC:1.4.3.16];K10581//ubiquitin-conjugating enzyme E2 O [EC:2.3.2.24]	gi|698465802|ref|XP_009782760.1|//PREDICTED: probable ubiquitin-conjugating enzyme E2 23 [Nicotiana sylvestris];gi|460381606|ref|XP_004236539.1|//PREDICTED: putative pentatricopeptide repeat-containing protein At1g64310 [Solanum lycopersicum];gi|723666410|ref|XP_010315388.1|//PREDICTED: probable ubiquitin-conjugating enzyme E2 23 isoform X2 [Solanum lycopersicum];gi|723666392|ref|XP_010315382.1|//PREDICTED: probable ubiquitin-conjugating enzyme E2 23 isoform X1 [Solanum lycopersicum]
Solyc03g121680.2.1	3257	66.2308568764946	16.9863669292422	-1.96312620389974	0.0033285506702161	Down	0.000473171867361497	NA	NA	NA	K01193//beta-fructofuranosidase [EC:3.2.1.26]	gi|460379680|ref|XP_004235589.1|//PREDICTED: beta-fructofuranosidase, insoluble isoenzyme CWINV1 [Solanum lycopersicum]
Solyc02g072240.3.1	3095	117.293915893287	37.0755273205177	-1.66158906463163	0.0122203994839898	Down	0.00224224560885698	NA	NA	NA	K10999//cellulose synthase A [EC:2.4.1.12]	gi|460374451|ref|XP_004233024.1|//PREDICTED: cellulose synthase A catalytic subunit 8 [UDP-forming] [Solanum lycopersicum]
Solyc12g038630.2.1	1295	1147.528703615	565.436923357569	-1.02109224064739	0.000419245940023982	Down	4.06469822212867e-05	NA	NA	NA	NA	gi|970064463|ref|XP_015059199.1|//PREDICTED: uncharacterized protein LOC107005189 [Solanum pennellii]
Solyc07g055130.3.1	5492	3712.49827840031	1747.29967793485	-1.0872632919723	6.70723295514978e-08	Down	2.11966729959587e-09	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process	K04424//sterile alpha motif and leucine zipper containing kinase AZK [EC:2.7.11.25];K10268//F-box and leucine-rich repeat protein 2/20	gi|460395426|ref|XP_004243284.1|//PREDICTED: F-box/LRR-repeat MAX2 homolog A-like [Solanum lycopersicum];gi|460395424|ref|XP_004243283.1|//PREDICTED: serine/threonine-protein kinase EDR1-like [Solanum lycopersicum]
Solyc05g056500.1.1	1206	138.646565760955	21.1537523356857	-2.71242637957109	1.08354308374034e-12	Down	1.36563932676078e-14	NA	NA	NA	K10260//F-box and WD-40 domain protein 7;K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K08332//vacuolar protein 8	gi|970028648|ref|XP_015075650.1|//PREDICTED: U-box domain-containing protein 26-like [Solanum pennellii]
Solyc02g065240.3.1	1243	853.825824349473	316.996447644243	-1.42947512502275	0.00183141751556315	Down	0.000230064073907651	NA	NA	NA	K08233//polyneuridine-aldehyde esterase [EC:3.1.1.78]	gi|460375255|ref|XP_004233422.1|//PREDICTED: salicylic acid-binding protein 2-like [Solanum lycopersicum]
Solyc05g053610.2.1	4521	239.25236895975	114.818565566368	-1.0591772724628	0.0445244819798127	Down	0.0111126942608757	GO:0031224//intrinsic component of membrane	GO:0032559//adenyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity	GO:0009207//purine ribonucleoside triphosphate catabolic process;GO:0051234//establishment of localization	K05681//ATP-binding cassette, subfamily G (WHITE), member 2	gi|460388418|ref|XP_004239864.1|//PREDICTED: pleiotropic drug resistance protein 1-like [Solanum lycopersicum]
Solyc12g099900.1.1	1536	1242.29985554126	524.523300717373	-1.24393467309816	6.56652384170283e-08	Down	2.07272893272712e-09	NA	NA	NA	K14494//DELLA protein	gi|460415061|ref|XP_004252879.1|//PREDICTED: scarecrow-like protein 3 [Solanum lycopersicum]
Solyc02g084250.3.1	2304	16.9320230244641	106.145506216142	2.64821703380901	1.88606737721561e-10	Up	3.59757772854897e-12	NA	NA	NA	K08739//DNA mismatch repair protein MLH3	gi|723673080|ref|XP_010316474.1|//PREDICTED: DNA mismatch repair protein MLH3 isoform X3 [Solanum lycopersicum];gi|971539165|ref|XP_015160674.1|//PREDICTED: DNA mismatch repair protein MLH3 isoform X9 [Solanum tuberosum];gi|971539159|ref|XP_015160667.1|//PREDICTED: DNA mismatch repair protein MLH3 isoform X7 [Solanum tuberosum]
Solyc08g077630.3.1	2184	476.126321468024	10416.0018490297	4.45131341256364	6.96498739916401e-27	Up	1.36260099607422e-29	NA	NA	NA	K00924	gi|460400640|ref|XP_004245841.1|//PREDICTED: probable receptor-like protein kinase At5g47070 [Solanum lycopersicum]
Solyc11g066120.2.1	2357	56.6629351260511	248.767910892907	2.13432316112703	7.88567912012944e-06	Up	4.25435058625494e-07	NA	NA	NA	K03217//YidC/Oxa1 family membrane protein insertase	gi|661887253|emb|CDP09033.1|//unnamed protein product [Coffea canephora];gi|970062836|ref|XP_015058326.1|//PREDICTED: inner membrane protein PPF-1, chloroplastic [Solanum pennellii]
Solyc02g067680.1.1	1089	238.191821995001	82.8493556876895	-1.52356149811526	5.58161312894095e-05	Down	3.93106838878008e-06	NA	NA	NA	K19041//E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27]	gi|460375078|ref|XP_004233335.1|//PREDICTED: RING-H2 finger protein ATL46-like [Solanum lycopersicum]
Solyc02g086915.1.1	920	59.9173416772133	1.62089243359154	-5.2081133595323	1.23907134583933e-11	Down	1.86466718711713e-13	NA	NA	NA	NA	gi|460372959|ref|XP_004232290.1|//PREDICTED: peptidyl-prolyl cis-trans isomerase CYP38, chloroplastic [Solanum lycopersicum]
Solyc02g082450.3.1	1614	1799.75947588636	537.867278075821	-1.74248198596325	3.64675033406126e-06	Down	1.75614764017999e-07	NA	NA	NA	K07088//uncharacterized protein	gi|460373557|ref|XP_004232583.1|//PREDICTED: uncharacterized transporter C5D6.04-like [Solanum lycopersicum]
Solyc04g076550.3.1	1713	12.47641409665	2.90047153780164	-2.10484397478063	0.0360308190365638	Down	0.00849394703096721	NA	NA	NA	NA	gi|460384632|ref|XP_004238014.1|//PREDICTED: uncharacterized protein LOC101260131 isoform X1 [Solanum lycopersicum]
Solyc01g073910.3.1	1148	535.933039009825	1807.44945633186	1.75383064144002	2.35337697843937e-21	Up	8.6768601913867e-24	GO:0043231//intracellular membrane-bounded organelle	GO:0003677//DNA binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0006351//transcription, DNA-templated	K09338//homeobox-leucine zipper protein	gi|460366970|ref|XP_004229348.1|//PREDICTED: homeobox-leucine zipper protein HOX11-like [Solanum lycopersicum]
Solyc07g009520.2.1	3328	21.1849784827303	48.2588402141349	1.18775158086513	0.014017463893819	Up	0.0026437000188004	NA	NA	NA	K20283//golgin subfamily A member 4;K10406//kinesin family member C2/C3;K20478//golgin subfamily B member 1	gi|460394945|ref|XP_004243050.1|//PREDICTED: WEB family protein At4g27595, chloroplastic-like isoform X2 [Solanum lycopersicum]
Solyc04g017720.3.1	565	101.261169014613	40.6543669338314	-1.31659881029973	0.0149299370405707	Down	0.00285539594510406	NA	NA	NA	K03860//phosphatidylinositol glycan, class Q;K20887	gi|460381659|ref|XP_004236562.1|//PREDICTED: protein GAST1-like [Solanum lycopersicum]
Solyc03g005000.3.1	4983	511.966549820571	1341.91958658331	1.39017676427044	8.29154184838263e-10	Up	1.78121534816647e-11	GO:0044464//cell part	GO:0004175//endopeptidase activity;GO:0004222//metalloendopeptidase activity	GO:0006508//proteolysis;GO:0019538//protein metabolic process	K07393//putative glutathione S-transferase	gi|723678460|ref|XP_010317387.1|//PREDICTED: uncharacterized protein LOC101249793 isoform X2 [Solanum lycopersicum];gi|970017280|ref|XP_015069768.1|//PREDICTED: protease HtpX homolog isoform X2 [Solanum pennellii];gi|970017276|ref|XP_015069766.1|//PREDICTED: protease HtpX homolog isoform X1 [Solanum pennellii];gi|460376422|ref|XP_004233997.1|//PREDICTED: uncharacterized protein LOC101249793 isoform X1 [Solanum lycopersicum]
Solyc10g008520.3.1	2038	1668.16288789215	492.727552160753	-1.75939811661088	0.001210471535166	Down	0.00014049302806573	NA	NA	NA	K14487//auxin responsive GH3 gene family	gi|460405370|ref|XP_004248149.1|//PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.5 [Solanum lycopersicum]
Solyc07g065440.3.1	4791	21.5899078572678	7.20848855141401	-1.58258838869722	0.0494934335882156	Down	0.0127345971523629	GO:0043232//intracellular non-membrane-bounded organelle	GO:0032559//adenyl ribonucleotide binding;GO:0003676//nucleic acid binding	GO:0044260//cellular macromolecule metabolic process	K10878//meiotic recombination protein SPO11	gi|723718079|ref|XP_010324272.1|//PREDICTED: meiotic recombination protein SPO11-1 isoform X3 [Solanum lycopersicum]
Solyc02g069490.3.1	2148	719.206631950828	81.8311985823978	-3.13568343593499	2.75882778889187e-08	Down	8.03330269429866e-10	NA	GO:0003824//catalytic activity;GO:0050662//coenzyme binding	NA	K09828//Delta24-sterol reductase [EC:1.3.1.72 1.3.1.-]	gi|970009887|ref|XP_015065843.1|//PREDICTED: delta(24)-sterol reductase-like [Solanum pennellii]
Solyc03g042560.2.1	1398	10.5116462591289	57.3381040461706	2.44750556929771	0.00132053999819399	Up	0.000156596767280191	GO:0044424//intracellular part	GO:0016840//carbon-nitrogen lyase activity	GO:0006558//L-phenylalanine metabolic process	K10775//phenylalanine ammonia-lyase [EC:4.3.1.24]	gi|723680539|ref|XP_004234632.2|//PREDICTED: phenylalanine ammonia-lyase [Solanum lycopersicum]
Solyc08g081520.1.1	1218	81.0185938654983	197.377104203814	1.2846296951242	8.17513057974665e-05	Up	6.07752371165515e-06	NA	NA	NA	NA	gi|460400089|ref|XP_004245568.1|//PREDICTED: uncharacterized protein LOC101246948 [Solanum lycopersicum]
Solyc11g043120.2.1	2201	196.948866401182	98.3454135090238	-1.00189143624461	0.00619762580100472	Down	0.000995863799702451	NA	NA	NA	K00888//phosphatidylinositol 4-kinase A [EC:2.7.1.67]	gi|970062659|ref|XP_015058232.1|//PREDICTED: phosphatidylinositol 4-kinase alpha 1 [Solanum pennellii]
Solyc12g014160.2.1	581	12.9036486545892	47.0469399401444	1.86632182733263	0.00247256561936138	Up	0.000329768439452073	NA	NA	NA	K08237//hydroquinone glucosyltransferase [EC:2.4.1.218];K17982//geranyllinalool synthase [EC:4.2.3.144]	gi|970068293|ref|XP_015061272.1|//PREDICTED: uncharacterized protein ycf45-like [Solanum pennellii];gi|970066248|ref|XP_015060102.1|//PREDICTED: uncharacterized protein LOC107005976 [Solanum pennellii]
Solyc07g006040.3.1	461	9.23827818662788	27.6953485368167	1.58394779950802	0.0125225472261037	Up	0.00230852074521851	NA	NA	NA	NA	gi|698455416|ref|XP_009780393.1|//PREDICTED: uncharacterized protein LOC104229440 [Nicotiana sylvestris]
Solyc04g080490.3.1	1365	99.6447629502657	45.6480592203015	-1.12624045936931	0.0121321305073125	Down	0.00222285461138495	NA	NA	NA	NA	gi|460385193|ref|XP_004238289.1|//PREDICTED: zinc-finger homeodomain protein 5 [Solanum lycopersicum]
Solyc03g083400.3.1	1227	3333.51091587331	1440.99545050381	-1.20997667069615	0.00122926241526543	Down	0.000143236752009544	NA	NA	NA	K03539//ribonuclease P/MRP protein subunit RPP1 [EC:3.1.26.5]	gi|970013254|ref|XP_015067590.1|//PREDICTED: zinc finger protein CONSTANS-LIKE 6 isoform X1 [Solanum pennellii]
Solyc01g080800.3.1	656	1236.34667509492	300.655581740884	-2.03989968786347	6.28717930313038e-09	Down	1.61555435065389e-10	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460367276|ref|XP_004229501.1|//PREDICTED: uncharacterized protein LOC101249488 [Solanum lycopersicum]
Solyc02g091700.3.1	1078	2482.64866431416	1179.18006460114	-1.07409607151575	7.18057282273784e-06	Down	3.81721196332903e-07	NA	NA	NA	NA	gi|971569340|ref|XP_015169122.1|//PREDICTED: uncharacterized protein At5g65660 isoform X1 [Solanum tuberosum]
Solyc12g042760.1.1	1440	30.3571298599407	4.04509808310632	-2.90778880660602	0.00106785127600377	Down	0.000121207949574995	NA	NA	NA	K20718;K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|460414249|ref|XP_004252485.1|//PREDICTED: protein TOO MANY MOUTHS [Solanum lycopersicum]
Solyc07g065165.1.1	981	104.246440713079	662.933884668461	2.66886686893607	7.64129653385722e-15	Up	6.35337296456902e-17	NA	NA	NA	K06911//uncharacterized protein	gi|460397001|ref|XP_004244057.1|//PREDICTED: pirin-like protein At1g50590 [Solanum lycopersicum]
Solyc11g017373.1.1	1664	3.31484429554315	52.2664414153341	3.97887192513845	6.1122747273913e-08	Up	1.91554734684611e-09	NA	NA	NA	K12448//UDP-arabinose 4-epimerase [EC:5.1.3.5]	gi|723678370|ref|XP_010317364.1|//PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Solanum lycopersicum];gi|970045743|ref|XP_015084351.1|//PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Solanum pennellii]
Solyc01g105600.3.1	798	78.6338451347761	32.5113259522533	-1.2742080062331	0.00799226396522522	Down	0.00135158865777605	NA	NA	NA	NA	gi|460369542|ref|XP_004230621.1|//PREDICTED: uncharacterized protein LOC101265869 [Solanum lycopersicum]
Solyc03g114450.3.1	1570	371.063740184119	866.667118815476	1.22381094025316	0.00171923248601821	Up	0.000213254684213772	GO:0009534//chloroplast thylakoid	NA	GO:0051592//response to calcium ion;GO:0010119//regulation of stomatal movement	K17525//chitinase domain-containing protein 1	gi|460380709|ref|XP_004236097.1|//PREDICTED: calcium sensing receptor, chloroplastic [Solanum lycopersicum]
Solyc04g079260.3.1	1959	566.529616385797	255.477792936983	-1.14895348528481	0.00234850603074076	Down	0.000309953316622971	NA	NA	NA	K16815//calcium-independent phospholipase A2-gamma	gi|460384966|ref|XP_004238177.1|//PREDICTED: patatin-like protein 2 [Solanum lycopersicum]
Solyc03g120980.3.1	5337	4622.10206243133	1737.52884214039	-1.41151219079049	1.73711967032507e-06	Down	7.64646356012164e-08	GO:0044464//cell part	GO:0032559//adenyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity	GO:0009207//purine ribonucleoside triphosphate catabolic process	K05681//ATP-binding cassette, subfamily G (WHITE), member 2	gi|460379795|ref|XP_004235646.1|//PREDICTED: ABC transporter G family member 36-like [Solanum lycopersicum]
Solyc05g050210.3.1	1299	52.3936838845749	14.6514993461437	-1.83834459487477	0.0312415241743457	Down	0.00707630699967353	NA	NA	NA	K01206//alpha-L-fucosidase [EC:3.2.1.51]	gi|460388873|ref|XP_004240088.1|//PREDICTED: GDSL esterase/lipase At4g01130-like [Solanum lycopersicum]
Solyc06g011580.1.1	3501	1065.59102686989	6466.47968475653	2.60132669191532	5.11127425395318e-20	Up	2.38449212750261e-22	NA	NA	NA	K07466//replication factor A1	gi|565396490|ref|XP_006363851.1|//PREDICTED: uncharacterized protein LOC102602462 isoform X1 [Solanum tuberosum]
Solyc08g074630.2.1	1764	4734.98097283246	978.769227192318	-2.27431797987899	0.0223900826935177	Down	0.00470798239932545	GO:0009534//chloroplast thylakoid	GO:0043169//cation binding;GO:0016682//oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor	GO:0008152//metabolic process	K00422//polyphenol oxidase [EC:1.10.3.1]	gi|460401031|ref|XP_004246033.1|//PREDICTED: polyphenol oxidase F, chloroplastic [Solanum lycopersicum]
Solyc07g005130.3.1	1369	534.759350074429	173.318180788382	-1.6254668038714	4.62456585116998e-08	Down	1.41277181006397e-09	NA	NA	NA	K06889//uncharacterized protein	gi|460393937|ref|XP_004242564.1|//PREDICTED: alpha/beta hydrolase domain-containing protein 17B [Solanum lycopersicum]
Solyc04g025120.2.1	704	75.2771288989729	304.210840189647	2.01478805345253	3.80948116102615e-06	Up	1.85171168549503e-07	NA	GO:0019829//cation-transporting ATPase activity;GO:0032559//adenyl ribonucleotide binding	GO:0030003//cellular cation homeostasis	K01551//arsenite-transporting ATPase [EC:3.6.3.16]	gi|970024822|ref|XP_015073718.1|//PREDICTED: ATPase ASNA1 homolog isoform X2 [Solanum pennellii]
Solyc08g006580.3.1	4296	179.83384021883	431.232342175986	1.26180085801599	5.37728856282679e-06	Up	2.72910544441435e-07	NA	NA	NA	NA	gi|970043880|ref|XP_015083349.1|//PREDICTED: protein ENHANCED DISEASE RESISTANCE 2-like [Solanum pennellii]
Solyc02g091450.2.1	838	83.9733733327111	219.683884870053	1.38742519424277	0.000120931578290689	Up	9.52711531003399e-06	NA	NA	NA	NA	gi|460372343|ref|XP_004231990.1|//PREDICTED: uncharacterized protein LOC101257125 [Solanum lycopersicum]
Solyc04g049940.2.1	680	14.2847846861804	3.28023388934276	-2.12260869917895	0.0227364229971601	Down	0.00479791559785821	NA	NA	NA	NA	gi|460383921|ref|XP_004237664.1|//PREDICTED: uncharacterized protein LOC101249817 [Solanum lycopersicum]
Solyc06g061070.3.1	1693	3644.14171812181	8131.27182885445	1.15790195919953	1.13665428423556e-05	Up	6.41880391511501e-07	GO:0043234//protein complex	NA	GO:0006546//glycine catabolic process	K02437//glycine cleavage system H protein	gi|460392743|ref|XP_004241973.1|//PREDICTED: glycine cleavage system H protein, mitochondrial [Solanum lycopersicum]
Solyc10g074440.2.1	1143	3.62818764803581	105.658891803467	4.86402129998613	3.07878211117345e-14	Up	2.84943716835466e-16	GO:0043231//intracellular membrane-bounded organelle;GO:0030312//external encapsulating structure	GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0030247//polysaccharide binding	GO:0033554//cellular response to stress;GO:0006026//aminoglycan catabolic process	K20547;K01183//chitinase [EC:3.2.1.14]	gi|460407111|ref|XP_004249000.1|//PREDICTED: endochitinase [Solanum lycopersicum]
Solyc02g082190.3.1	2109	777.336183904079	339.097564212778	-1.19683825191174	1.96108193157839e-05	Down	1.18712596986818e-06	NA	NA	NA	K01937//CTP synthase [EC:6.3.4.2]	gi|460373593|ref|XP_004232600.1|//PREDICTED: CTP synthase-like [Solanum lycopersicum]
Solyc02g092050.3.1	5393	77.6191421411495	18.4252411856529	-2.07472898405816	0.0306206779945797	Down	0.00688562048057196	NA	NA	NA	K09285//AP2-like factor, ANT lineage	gi|460372259|ref|XP_004231948.1|//PREDICTED: AP2-like ethylene-responsive transcription factor ANT isoform X2 [Solanum lycopersicum]
Solyc06g083490.3.1	1078	102.374976125176	29.4330056072289	-1.79835633696025	0.0149704130785313	Down	0.00286623145811309	NA	NA	NA	K08081//tropinone reductase I [EC:1.1.1.206]	gi|723711868|ref|XP_004242399.2|//PREDICTED: tropinone reductase homolog [Solanum lycopersicum]
Solyc01g095110.3.1	2286	196.154441632802	82.2918400967523	-1.25316871558187	1.05796592947323e-05	Down	5.90677742414699e-07	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial;K14442//ATP-dependent RNA helicase DHX36 [EC:3.6.4.13]	gi|460370711|ref|XP_004231193.1|//PREDICTED: pentatricopeptide repeat-containing protein At3g61520, mitochondrial-like [Solanum lycopersicum]
Solyc06g075370.3.1	1118	1262.31422679438	618.353219136072	-1.02956800093753	3.8050870078443e-06	Down	1.8454808737341e-07	NA	NA	NA	K16222//Dof zinc finger protein DOF5.5	gi|460391308|ref|XP_004241265.1|//PREDICTED: dof zinc finger protein DOF2.1 [Solanum lycopersicum]
BGI_novel_G000068	1062	37.2244565023669	147.529106473666	1.98667692639358	3.85569903680739e-09	Up	9.28367057800369e-11	NA	NA	NA	K15920//beta-D-xylosidase 4 [EC:3.2.1.37]	gi|565370398|ref|XP_006351808.1|//PREDICTED: beta-xylosidase/alpha-L-arabinofuranosidase 2-like [Solanum tuberosum]
Solyc04g008480.2.1	1972	14.7610954205643	3.0482231094268	-2.27575938035732	0.0152749780337384	Down	0.00293258889789943	NA	NA	NA	K06236//collagen, type I, alpha;K14491//two-component response regulator ARR-B family	gi|723690080|ref|XP_004236899.2|//PREDICTED: putative Myb family transcription factor At1g14600 [Solanum lycopersicum]
Solyc10g076740.2.1	796	192.071343589738	455.735300475728	1.24655383385359	4.69345894644861e-06	Up	2.33966632958781e-07	NA	GO:0016787//hydrolase activity	NA	NA	gi|723737769|ref|XP_010327727.1|//PREDICTED: GDSL esterase/lipase CPRD49-like [Solanum lycopersicum]
Solyc01g096740.3.1	2777	343.170713224899	164.840056562105	-1.05785957226293	5.59121034403233e-05	Down	3.94413822237044e-06	GO:0016020//membrane	NA	NA	K17866//diphthamide biosynthesis protein 2;K12670//oligosaccharyltransferase complex subunit beta;K12818//ATP-dependent RNA helicase DHX8/PRP22 [EC:3.6.4.13]	gi|460368394|ref|XP_004230052.1|//PREDICTED: protein ZINC INDUCED FACILITATOR-LIKE 1 [Solanum lycopersicum];gi|719986505|ref|XP_010251716.1|//PREDICTED: protein ZINC INDUCED FACILITATOR-LIKE 1-like isoform X5 [Nelumbo nucifera]
Solyc12g019320.2.1	1839	5182.20947845135	1459.51048491771	-1.82808275920556	6.24628371749764e-29	Down	1.0809971821102e-31	NA	NA	NA	K03327//multidrug resistance protein, MATE family	gi|460413225|ref|XP_004251995.1|//PREDICTED: protein TRANSPARENT TESTA 12-like [Solanum lycopersicum]
Solyc03g007775.1.1	3066	77.7152648853881	175.323639326688	1.17375062468432	0.00886811965791016	Up	0.00153073487548878	NA	NA	NA	NA	gi|460376850|ref|XP_004234209.1|//PREDICTED: probable membrane-associated kinase regulator 6 [Solanum lycopersicum]
Solyc11g007140.2.1	2214	56.6990785099331	138.854481619306	1.29217654846784	0.00143816148321798	Up	0.000173358517390158	GO:0044464//cell part	NA	GO:0006810//transport	NA	gi|971575680|ref|XP_015170776.1|//PREDICTED: hippocampus abundant transcript-like protein 1 isoform X2 [Solanum tuberosum];gi|460410114|ref|XP_004250476.1|//PREDICTED: hippocampus abundant transcript-like protein 1 isoform X1 [Solanum lycopersicum]
Solyc08g067940.3.1	697	80.047455719	15.5486233242912	-2.36406869816599	0.0112679896655254	Down	0.00203188391523187	NA	NA	NA	NA	gi|970046183|ref|XP_015084591.1|//PREDICTED: uncharacterized protein LOC107028051 [Solanum pennellii]
Solyc06g007460.3.1	758	78.6947493768299	29.5725749577655	-1.41200751234502	0.000172872091283385	Down	1.44970613796337e-05	NA	NA	NA	NA	gi|460389572|ref|XP_004240425.1|//PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 6 [Solanum lycopersicum]
Solyc04g072810.3.1	4854	1.52630002201559	164.496450604728	6.75187406656969	6.28768694672924e-24	Up	1.75052232527451e-26	NA	NA	NA	K01834//2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]	gi|723694220|ref|XP_010320154.1|//PREDICTED: random slug protein 5-like isoform X1 [Solanum lycopersicum]
Solyc11g013240.2.1	2038	827.95691474571	292.556008483238	-1.5008428462829	3.87964482154084e-10	Down	7.85270471779147e-12	NA	NA	NA	K08866//serine/threonine-protein kinase TTK/MPS1 [EC:2.7.12.1]	gi|723742453|ref|XP_010312790.1|//PREDICTED: serine/threonine-protein kinase MPS1 isoform X2 [Solanum lycopersicum]
Solyc12g040480.2.1	994	1.48759015695781	31.6522718035874	4.41126003883902	8.08650995192155e-08	Up	2.59206413808772e-09	NA	NA	NA	K13336//peroxin-3	gi|460413805|ref|XP_004252269.1|//PREDICTED: peroxisome biogenesis protein 3-2-like [Solanum lycopersicum]
Solyc02g070980.1.1	883	483.802850152393	81.605863167827	-2.567674553569	0.00603970826807035	Down	0.00096526263065323	GO:0009521//photosystem;GO:0010287//plastoglobule;GO:0009535//chloroplast thylakoid membrane;GO:0009523//photosystem II;GO:0009534//chloroplast thylakoid;GO:0031224//intrinsic component of membrane;GO:0016021//integral component of membrane;GO:0009941//chloroplast envelope;GO:0009522//photosystem I	GO:0043169//cation binding;GO:0031409//pigment binding;GO:0046872//metal ion binding;GO:0046906//tetrapyrrole binding;GO:0016168//chlorophyll binding	GO:0009768//photosynthesis, light harvesting in photosystem I;GO:0006464//cellular protein modification process;GO:0006091//generation of precursor metabolites and energy;GO:0009416//response to light stimulus;GO:0018298//protein-chromophore linkage	K08912//light-harvesting complex II chlorophyll a/b binding protein 1	gi|723675658|ref|XP_010316912.1|//PREDICTED: chlorophyll a-b binding protein 1A, chloroplastic [Solanum lycopersicum]
Solyc09g065660.3.1	2328	20.476859171826	2.59950373474581	-2.97768631250109	0.000443979064014859	Down	4.32688815253429e-05	GO:0005634//nucleus	GO:0043565//sequence-specific DNA binding;GO:0003700//transcription factor activity, sequence-specific DNA binding	GO:0006355//regulation of transcription, DNA-templated	K09419//heat shock transcription factor, other eukaryote	gi|723730611|ref|XP_010326409.1|//PREDICTED: heat stress transcription factor A-7a isoform X1 [Solanum lycopersicum]
Solyc06g071560.3.1	1953	229.128820067872	507.953221913764	1.14853670963394	3.94560311859285e-08	Up	1.1875404420144e-09	NA	NA	NA	K04354//serine/threonine-protein phosphatase 2A regulatory subunit B	gi|460391795|ref|XP_004241504.1|//PREDICTED: serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1 [Solanum lycopersicum]
Solyc02g082200.3.1	775	1780.64616585931	3641.69839289169	1.03221057719173	5.14901267514067e-12	Up	7.20629313450839e-14	NA	NA	NA	K07390//monothiol glutaredoxin	gi|460373591|ref|XP_004232599.1|//PREDICTED: monothiol glutaredoxin-S7, chloroplastic [Solanum lycopersicum]
Solyc02g072450.3.1	424	99.7242036532323	307.125076982114	1.62281071136242	6.96688735829478e-09	Up	1.80593882237212e-10	NA	NA	NA	K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|723675204|ref|XP_010316833.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Solanum lycopersicum]
Solyc01g008925.1.1	1837	152.014484125068	314.322024045566	1.04803457107361	3.36052547959609e-06	Up	1.59681854053042e-07	NA	NA	NA	K01256//aminopeptidase N [EC:3.4.11.2];K08956//AFG3 family protein [EC:3.4.24.-]	gi|970004282|ref|XP_015062935.1|//PREDICTED: uncharacterized protein At2g37660, chloroplastic [Solanum pennellii];gi|723655157|ref|XP_004228880.2|//PREDICTED: uncharacterized protein At2g37660, chloroplastic [Solanum lycopersicum]
Solyc12g015880.2.1	2391	8730.87645476215	2165.52935580055	-2.01140675737767	4.78490184154387e-13	Down	5.67059473320662e-15	GO:0044424//intracellular part	GO:0005515//protein binding;GO:0032559//adenyl ribonucleotide binding	GO:0044267//cellular protein metabolic process;GO:0050896//response to stimulus	K04079//molecular chaperone HtpG	gi|565356086|ref|XP_006344905.1|//PREDICTED: heat shock cognate protein 80-like [Solanum tuberosum];gi|350535174|ref|NP_001234436.1|//molecular chaperone Hsp90-1 [Solanum lycopersicum]
Solyc05g006560.1.1	1803	1318.98045918253	517.881838001352	-1.3487283216068	5.38586629799195e-07	Down	2.07288985058155e-08	NA	NA	NA	NA	gi|460386098|ref|XP_004238737.1|//PREDICTED: UPF0392 protein RCOM_0530710 [Solanum lycopersicum]
Solyc02g062670.3.1	1807	409.029985897806	170.071351066266	-1.26606647472727	2.59360367339946e-05	Down	1.64222535076422e-06	NA	NA	NA	K19600//tubby-related protein 1	gi|460375461|ref|XP_004233524.1|//PREDICTED: tubby-like F-box protein 5 [Solanum lycopersicum]
Solyc06g082040.2.1	3282	36.0944452569294	87.1758627087014	1.27215190514916	0.00391310392179559	Up	0.000575187999339932	NA	NA	NA	NA	gi|723711833|ref|XP_010323136.1|//PREDICTED: uncharacterized protein LOC101245266 [Solanum lycopersicum]
Solyc04g079350.1.1	954	1345.61694484599	438.753293114985	-1.61678591924431	1.12327633704338e-11	Down	1.66505220765648e-13	NA	NA	NA	NA	gi|460384978|ref|XP_004238183.1|//PREDICTED: uncharacterized protein LOC101262614 [Solanum lycopersicum]
Solyc11g008680.2.1	1533	78.378223970063	31.51933639378	-1.31421572152131	0.00718104626748345	Down	0.00119008686261342	GO:0009536//plastid	GO:0046872//metal ion binding;GO:0016717//oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water	GO:0006631//fatty acid metabolic process	K03921//acyl-[acyl-carrier-protein] desaturase [EC:1.14.19.2 1.14.19.11 1.14.19.26]	gi|460409301|ref|XP_004250077.1|//PREDICTED: acyl-[acyl-carrier-protein] desaturase, chloroplastic [Solanum lycopersicum]
Solyc06g054130.1.1	339	8.2306816992744	25.3314978268164	1.62184855401749	0.0362494085485973	Up	0.00856195590400062	NA	NA	NA	NA	gi|460390871|ref|XP_004241048.1|//PREDICTED: uncharacterized protein LOC101260350 [Solanum lycopersicum]
Solyc01g067295.1.1	606	884.862612800028	1892.26854745175	1.09659146870067	0.0247652448335888	Up	0.00530803611049494	NA	NA	NA	NA	gi|460366705|ref|XP_004229220.1|//PREDICTED: uncharacterized protein LOC101247655 [Solanum lycopersicum]
Solyc00g005840.3.1	1372	291.699695102959	657.531558770597	1.17257626113743	5.59121034403233e-05	Up	3.94410177145357e-06	NA	GO:0015036//disulfide oxidoreductase activity	GO:0019725//cellular homeostasis;GO:0018904//ether metabolic process	K03671//thioredoxin 1	gi|460415741|ref|XP_004253215.1|//PREDICTED: thioredoxin-like 2, chloroplastic [Solanum lycopersicum]
Solyc05g006850.3.1	926	7043.01788025883	16962.1816188868	1.26805608598531	2.82970545047284e-14	Up	2.60826875607918e-16	NA	NA	NA	K03671//thioredoxin 1	gi|460386131|ref|XP_004238753.1|//PREDICTED: thioredoxin H4 [Solanum lycopersicum]
Solyc03g063040.3.1	777	8.96434642528181	35.0212632091182	1.9659608147123	0.00173439092334848	Up	0.000215722211910838	NA	NA	NA	K15015//solute carrier family 32 (vesicular inhibitory amino acid transporter)	gi|460378093|ref|XP_004234813.1|//PREDICTED: vacuolar amino acid transporter 1-like [Solanum lycopersicum]
BGI_novel_G000216	2717	41.5311413856378	2.81742254455421	-3.88174566731965	3.81017750145547e-07	Down	1.41197322758978e-08	NA	NA	NA	K01537//Ca2+-transporting ATPase [EC:3.6.3.8];K00574//cyclopropane-fatty-acyl-phospholipid synthase [EC:2.1.1.79];K01051//pectinesterase [EC:3.1.1.11]	gi|970039744|ref|XP_015081210.1|//PREDICTED: uncharacterized protein LOC107024754 [Solanum pennellii]
BGI_novel_G000349	2452	108.529091197143	219.883310752491	1.01865629853914	0.00280508338983093	Up	0.000384278749528153	NA	NA	NA	NA	gi|970007211|ref|XP_015064479.1|//PREDICTED: uncharacterized protein LOC107009648 [Solanum pennellii]
Solyc02g086880.3.1	1397	5986.12265162855	2800.99003897995	-1.09568498615258	1.25220687912458e-08	Down	3.41082686413167e-10	GO:0043231//intracellular membrane-bounded organelle	GO:0016620//oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor;GO:0016614//oxidoreductase activity, acting on CH-OH group of donors;GO:0000166//nucleotide binding	GO:0008152//metabolic process	K00122//formate dehydrogenase [EC:1.2.1.2]	gi|350538487|ref|NP_001234857.1|//formate dehydrogenase [Solanum lycopersicum]
Solyc06g069370.3.1	3206	232.062821819441	80.8463960822491	-1.52126004204876	0.00140786502204333	Down	0.0001691768578031	NA	NA	NA	K16189//phytochrome-interacting factor 4;K13422//transcription factor MYC2	gi|460392019|ref|XP_004241615.1|//PREDICTED: transcription factor BIM1 isoform X3 [Solanum lycopersicum];gi|723708715|ref|XP_010322585.1|//PREDICTED: transcription factor BIM1 isoform X1 [Solanum lycopersicum]
Solyc09g074280.1.1	1383	510.029242582865	1963.18950012008	1.94454756640797	2.02420720619406e-15	Up	1.55356760746271e-17	NA	NA	NA	K15502//serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A	gi|460404150|ref|XP_004247547.1|//PREDICTED: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C-like [Solanum lycopersicum]
Solyc09g084490.3.1	554	1827.82991008325	437.674365715833	-2.06220203178865	0.0409168258104372	Down	0.00994749918687154	NA	GO:0016787//hydrolase activity;GO:0004866//endopeptidase inhibitor activity	GO:0006950//response to stress;GO:0051346//negative regulation of hydrolase activity	NA	gi|460404377|ref|XP_004247659.1|//PREDICTED: wound-induced proteinase inhibitor 1-like [Solanum lycopersicum]
Solyc08g080660.1.1	753	247.522316381032	33.1904221932279	-2.89871971688747	4.80100462293937e-10	Down	9.82598387840113e-12	NA	NA	GO:0006950//response to stress	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723724450|ref|XP_004245628.2|//PREDICTED: osmotin-like protein OSML15 [Solanum lycopersicum]
Solyc03g120260.3.1	1199	18269.9692285354	6655.82008962037	-1.45678586178758	1.21596346009136e-11	Down	1.82435669259819e-13	NA	NA	NA	K17302//coatomer subunit beta'	gi|460379915|ref|XP_004235705.1|//PREDICTED: coatomer subunit beta'-2 [Solanum lycopersicum]
Solyc07g005540.1.1	2568	244.876839817821	114.305105591359	-1.09916648693688	0.00589688929724858	Down	0.000938887716552144	NA	NA	NA	K13415//protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1]	gi|460393988|ref|XP_004242588.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g24230 [Solanum lycopersicum]
Solyc01g086660.2.1	467	291.020262820217	765.542626644171	1.39536310461859	0.000182137108292248	Up	1.54042219503752e-05	NA	NA	NA	NA	NA
Solyc01g005220.3.1	2419	220.058903776592	931.565103515079	2.0817668514955	6.32749022769764e-17	Up	4.16595481507557e-19	NA	NA	NA	K01183//chitinase [EC:3.2.1.14];K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460365720|ref|XP_004228745.1|//PREDICTED: MACPF domain-containing protein At1g14780 [Solanum lycopersicum]
Solyc03g059150.3.1	5148	466.163013125953	1184.15709867057	1.34495404575815	0.00448198150166684	Up	0.000675163804841009	GO:0016020//membrane;GO:0031965//nuclear membrane;GO:0016021//integral component of membrane;GO:0009536//plastid	NA	GO:0006812//cation transport;GO:0006811//ion transport	NA	gi|698519603|ref|XP_009804671.1|//PREDICTED: ion channel CASTOR-like isoform X7 [Nicotiana sylvestris];gi|565350701|ref|XP_006342304.1|//PREDICTED: ion channel CASTOR-like isoform X1 [Solanum tuberosum];gi|565350703|ref|XP_006342305.1|//PREDICTED: ion channel CASTOR-like isoform X2 [Solanum tuberosum]
Solyc07g042000.3.1	1926	77.7867535500263	172.074039877512	1.14543305812503	0.00302300224810015	Up	0.000421036656225235	NA	NA	NA	K13754//solute carrier family 24 (sodium/potassium/calcium exchanger), member 6	gi|460396276|ref|XP_004243702.1|//PREDICTED: cation/calcium exchanger 4-like [Solanum lycopersicum]
Solyc12g014355.1.1	3459	1056.7661698077	271.837544800857	-1.95883955494242	1.66927501242627e-13	Down	1.74589335385442e-15	GO:0016021//integral component of membrane;GO:0005886//plasma membrane	GO:0004674//protein serine/threonine kinase activity;GO:0005524//ATP binding	GO:0006468//protein phosphorylation	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K20718	gi|460413033|ref|XP_004251900.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53430 isoform X1 [Solanum lycopersicum];gi|723748685|ref|XP_010313922.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g53430 isoform X2 [Solanum lycopersicum]
Solyc04g080850.3.1	5197	28278.7576629773	65577.0522993639	1.21347231244503	7.30725564558539e-15	Up	6.04814237031146e-17	NA	GO:0016787//hydrolase activity	NA	K03671//thioredoxin 1;K12309//beta-galactosidase [EC:3.2.1.23]	gi|460385844|ref|XP_004238611.1|//PREDICTED: beta-galactosidase 5 [Solanum lycopersicum]
Solyc11g005985.1.1	5977	3.1513807693046	14.9871977290341	2.24967467144474	0.0132228044180614	Up	0.0024644760378885	NA	NA	NA	K11000//callose synthase [EC:2.4.1.-]	gi|970060596|ref|XP_015057067.1|//PREDICTED: callose synthase 5 [Solanum pennellii]
Solyc05g008950.3.1	3428	148.032034710404	917.329337717949	2.63153036578573	9.45937273440651e-19	Up	5.0891282957868e-21	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460386430|ref|XP_004238901.1|//PREDICTED: probable serine/threonine-protein kinase At1g18390 [Solanum lycopersicum]
Solyc02g091180.1.1	501	402.127482363384	183.929499737622	-1.12850005021303	6.51129761349438e-07	Down	2.5476860489218e-08	NA	NA	NA	NA	gi|723670004|ref|XP_010316076.1|//PREDICTED: uncharacterized protein LOC104645686 [Solanum lycopersicum]
Solyc04g082470.2.1	1171	649.900455033135	280.135304938175	-1.21409494301999	4.01946292645975e-09	Down	9.82938638900993e-11	NA	NA	NA	K11805//WD repeat-containing protein 68	gi|723696296|ref|XP_010320460.1|//PREDICTED: catalase isozyme 3-like [Solanum lycopersicum];gi|460385483|ref|XP_004238433.1|//PREDICTED: WD repeat-containing protein LWD1 [Solanum lycopersicum]
Solyc01g096720.3.1	1612	576.815742900189	120.476471171051	-2.25935912193384	0.000653540762634786	Down	6.81570727623637e-05	NA	NA	NA	K17866//diphthamide biosynthesis protein 2;K12818//ATP-dependent RNA helicase DHX8/PRP22 [EC:3.6.4.13]	gi|723661788|ref|XP_004230048.2|//PREDICTED: protein ZINC INDUCED FACILITATOR-LIKE 1-like [Solanum lycopersicum]
Solyc05g012450.3.1	5810	495.712870852555	223.370553154095	-1.15006570942755	1.1367484366701e-05	Down	6.42361230955035e-07	NA	NA	NA	K16302//metal transporter CNNM;K15449//tRNA wybutosine-synthesizing protein 1 [EC:4.1.3.44]	gi|723698587|ref|XP_010320876.1|//PREDICTED: probable methyltransferase PMT5 [Solanum lycopersicum];gi|698580862|ref|XP_009777410.1|//PREDICTED: probable methyltransferase PMT5 isoform X1 [Nicotiana sylvestris]
Solyc03g005460.3.1	3118	130.115506816152	30.4218008309108	-2.09661544719247	6.45990407737782e-09	Down	1.66236809214689e-10	GO:0009526//plastid envelope	GO:0032559//adenyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity;GO:0046914//transition metal ion binding;GO:0003676//nucleic acid binding	NA	K15505//DNA repair protein RAD5 [EC:3.6.4.-]	gi|723678610|ref|XP_004234234.2|//PREDICTED: putative SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 3-like 3 [Solanum lycopersicum]
Solyc08g066880.3.1	744	25.8048012644027	116.137635989587	2.17012414817041	0.000126571961670425	Up	1.00478050966352e-05	NA	NA	NA	NA	gi|723722784|ref|XP_010325109.1|//PREDICTED: bark storage protein A [Solanum lycopersicum]
Solyc07g052260.3.1	520	1.52120624869163	6.10800952400807	2.00548654139825	0.0489333074399676	Up	0.0125518167842626	NA	NA	NA	NA	gi|870845338|gb|KMS98086.1|//hypothetical protein BVRB_4g095980 [Beta vulgaris subsp. vulgaris]
Solyc08g081120.3.1	1751	80.0404174237899	28.1755746847929	-1.50628365443925	0.0115106982421994	Down	0.00208690951200748	NA	NA	NA	K10406//kinesin family member C2/C3	gi|460400155|ref|XP_004245601.1|//PREDICTED: kinesin KP1 [Solanum lycopersicum]
Solyc02g094270.2.1	716	14.119893961634	40.097403249166	1.50577955500921	0.0227478962673388	Up	0.00480119255303878	GO:0043231//intracellular membrane-bounded organelle	GO:0003677//DNA binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0010467//gene expression	K18835//WRKY transcription factor 2;K13424//WRKY transcription factor 33	gi|460375585|ref|XP_004233585.1|//PREDICTED: probable WRKY transcription factor 45 [Solanum lycopersicum]
BGI_novel_G000329	1332	177.435105481404	390.091455288564	1.13652092271579	1.98852220291648e-06	Up	8.8802703343185e-08	NA	NA	NA	NA	gi|970045439|ref|XP_015084164.1|//PREDICTED: uncharacterized protein LOC107027531 [Solanum pennellii]
Solyc06g048970.3.1	2457	471.390165247362	232.029000867108	-1.02261652317382	1.04011232878299e-05	Down	5.79927190088935e-07	NA	NA	NA	NA	gi|460390486|ref|XP_004240862.1|//PREDICTED: uncharacterized protein LOC101254599 [Solanum lycopersicum]
Solyc05g047680.3.1	1798	425.588237175823	169.318774949549	-1.32971632111275	0.0290301280281373	Down	0.00645696451852325	NA	GO:0005506//iron ion binding;GO:0016491//oxidoreductase activity	NA	K00517;K20619//null	gi|460388925|ref|XP_004240114.1|//PREDICTED: cytochrome P450 78A9-like [Solanum lycopersicum]
Solyc04g007500.1.1	492	28.9374160503789	93.1555385350755	1.68670544371305	0.000579102422271439	Up	5.92828326185322e-05	NA	GO:0046872//metal ion binding	NA	K16282//E3 ubiquitin-protein ligase RHA2 [EC:2.3.2.27]	gi|723690338|ref|XP_010319406.1|//PREDICTED: E3 ubiquitin-protein ligase RHA2A [Solanum lycopersicum]
Solyc01g059990.3.1	2551	6449.04209840367	2435.03583851062	-1.4051418814343	0.000176212013340094	Down	1.48368128613668e-05	GO:0043231//intracellular membrane-bounded organelle;GO:0046658//anchored component of plasma membrane;GO:0005773//vacuole	GO:0008422//beta-glucosidase activity;GO:0042973//glucan endo-1,3-beta-D-glucosidase activity;GO:0030247//polysaccharide binding;GO:0043167//ion binding	GO:0006952//defense response;GO:0006950//response to stress;GO:0044238//primary metabolic process;GO:0005975//carbohydrate metabolic process	K03549//KUP system potassium uptake protein;K19891//glucan endo-1,3-beta-glucosidase 1/2/3 [EC:3.2.1.39]	gi|460376906|ref|XP_004234237.1|//PREDICTED: uncharacterized protein LOC101244554 [Solanum lycopersicum];gi|350537435|ref|NP_001234805.1|//glucan endo-1,3-beta-glucosidase B precursor [Solanum lycopersicum]
Solyc02g088140.2.1	6482	110.631771490221	222.084790125601	1.00534482911218	0.014921744969485	Up	0.00285298374472997	NA	NA	NA	K17710//pentatricopeptide repeat domain-containing protein 1	gi|970012446|ref|XP_015067163.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g15300 [Solanum pennellii];gi|971534906|ref|XP_015162444.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g01110-like [Solanum tuberosum]
Solyc10g076270.2.1	2223	52.5562984179651	3.48733154735155	-3.91366823352129	2.82389964501245e-07	Down	1.01991860767944e-08	NA	NA	NA	K07204//regulatory associated protein of mTOR	gi|723737696|ref|XP_010327714.1|//PREDICTED: regulatory-associated protein of TOR 1-like [Solanum lycopersicum]
BGI_novel_G000175	3984	127.736769056342	295.764928058848	1.21127712224006	1.08710483906687e-05	Up	6.09400380063819e-07	NA	NA	NA	K02328//DNA polymerase delta subunit 2;K11323//histone arginine demethylase JMJD6 [EC:1.14.11.-]	gi|971549301|ref|XP_015163897.1|//PREDICTED: uncharacterized protein LOC107060452 [Solanum tuberosum]
Solyc02g062330.2.1	4446	35.115993763304	149.100002959694	2.08608011792206	3.43571042061519e-10	Up	6.86695954365352e-12	NA	NA	NA	K11498//centromeric protein E	gi|723677799|ref|XP_010317234.1|//PREDICTED: kinesin-like protein NACK1 isoform X1 [Solanum lycopersicum]
Solyc03g112340.1.1	1197	4848.57871864845	798.055465046131	-2.60300098417913	6.87995734672606e-34	Down	9.05938702541053e-37	NA	NA	NA	K10664//E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:2.3.2.27]	gi|460381031|ref|XP_004236256.1|//PREDICTED: E3 ubiquitin-protein ligase ATL6-like [Solanum lycopersicum]
Solyc10g079350.2.1	2096	251.436761058451	63.0082395925452	-1.9965831855467	0.0133090843419273	Down	0.00248306054370268	NA	GO:0008270//zinc ion binding;GO:0017025//TBP-class protein binding	GO:0006355//regulation of transcription, DNA-templated;GO:0006352//DNA-templated transcription, initiation	K03124//transcription initiation factor TFIIB;K13495//cis-zeatin O-glucosyltransferase [EC:2.4.1.215]	gi|723738241|ref|XP_004249229.2|//PREDICTED: zeatin O-glucosyltransferase-like [Solanum lycopersicum];gi|460407594|ref|XP_004249237.1|//PREDICTED: transcription initiation factor IIB-2 isoform X1 [Solanum lycopersicum]
BGI_novel_G000497	271	50.4535938498552	11.0937666198652	-2.18520775646789	0.000265374062811079	Down	2.37818291051915e-05	NA	NA	NA	NA	NA
Solyc02g084350.3.1	1931	116.063434474235	37.6280316119534	-1.62503379934071	4.62125721666783e-06	Down	2.29498101053481e-07	NA	NA	NA	K12581//CCR4-NOT transcription complex subunit 7/8;K03094//S-phase kinase-associated protein 1;K13126//polyadenylate-binding protein;K05941//glutathione gamma-glutamylcysteinyltransferase [EC:2.3.2.15];K01054//acylglycerol lipase [EC:3.1.1.23]	gi|460373328|ref|XP_004232472.1|//PREDICTED: NAC domain-containing protein 7-like [Solanum lycopersicum]
Solyc05g050820.3.1	1860	195.386652366491	588.606373126937	1.59097124864316	8.46332745984275e-08	Up	2.72877036609678e-09	NA	GO:0046872//metal ion binding;GO:0005524//ATP binding;GO:0031072//heat shock protein binding;GO:0051082//unfolded protein binding	GO:0006457//protein folding;GO:0009408//response to heat	K09503//DnaJ homolog subfamily A member 2	gi|970027437|ref|XP_015075021.1|//PREDICTED: dnaJ protein homolog isoform X1 [Solanum pennellii]
Solyc10g047090.2.1	288	635.907455601852	1408.23001665723	1.14699427060194	7.90839354081717e-05	Up	5.85244924559344e-06	GO:0030529//intracellular ribonucleoprotein complex;GO:0009536//plastid	GO:0005198//structural molecule activity;GO:0003824//catalytic activity;GO:0003676//nucleic acid binding	GO:0010467//gene expression	K02886//large subunit ribosomal protein L2	gi|991820860|gb|AMF83998.1|//ribosomal protein L2 (chloroplast) [Gynostemma pentaphyllum]
Solyc02g079890.2.1	1773	27.7958155631545	8.67415372991592	-1.68007279606733	0.0368885884269145	Down	0.00874953449672861	NA	NA	NA	K14173//alpha-farnesene synthase [EC:4.2.3.46]	gi|348659079|gb|AEP82777.1|//terpene synthase [Solanum lycopersicum]
Solyc07g063560.3.1	2161	82.3163032278758	37.3921837471534	-1.13844146445229	0.00985511673180522	Down	0.00173558319870505	NA	NA	NA	NA	gi|460397267|ref|XP_004244189.1|//PREDICTED: uncharacterized protein LOC101243730 [Solanum lycopersicum]
Solyc11g017430.2.1	1033	207.295349850658	458.140169226014	1.14410130873685	1.09785168640993e-08	Up	2.97386461330002e-10	NA	NA	NA	NA	gi|565369044|ref|XP_006351147.1|//PREDICTED: uncharacterized protein LOC102586721 isoform X1 [Solanum tuberosum];gi|460409919|ref|XP_004250384.1|//PREDICTED: uncharacterized protein LOC101266895 [Solanum lycopersicum]
Solyc12g010020.2.1	384	2522.13714807897	911.582718524074	-1.46820124842071	0.00231757797180425	Down	0.000305173924052478	GO:0009536//plastid	GO:0008237//metallopeptidase activity;GO:0008238//exopeptidase activity;GO:0046914//transition metal ion binding	GO:0019538//protein metabolic process;GO:0050896//response to stimulus	K01255//leucyl aminopeptidase [EC:3.4.11.1]	gi|941355906|ref|NP_001233862.2|//leucine aminopeptidase 1, chloroplastic [Solanum lycopersicum]
Solyc05g050110.3.1	1353	286.64489351122	759.751464073136	1.40626297177822	1.79258511086883e-13	Up	1.88835150881592e-15	NA	NA	NA	K12842//U2-associated protein SR140	gi|970029507|ref|XP_015076083.1|//PREDICTED: uncharacterized protein LOC107020299 [Solanum pennellii]
Solyc03g123670.3.1	1538	890.655385310219	353.662098781997	-1.33249571165647	0.000673992441808471	Down	7.07463849753812e-05	NA	GO:0046872//metal ion binding	NA	K16286//E3 ubiquitin-protein ligase EL5 [EC:2.3.2.27]	gi|460379547|ref|XP_004235523.1|//PREDICTED: uncharacterized protein LOC101244939 [Solanum lycopersicum]
Solyc01g110660.3.1	496	2.79198838199335	12.2315424442282	2.13124150135513	0.033590701339851	Up	0.00776089189946346	NA	NA	NA	K14488//SAUR family protein	gi|723666146|ref|XP_010315346.1|//PREDICTED: auxin-induced protein 15A-like [Solanum lycopersicum]
Solyc04g009320.3.1	1624	230.003397658847	68.1764377679666	-1.75431004765801	4.50326085054614e-09	Down	1.11480272372436e-10	NA	NA	NA	K14001//nucleotide exchange factor SIL1	gi|460382213|ref|XP_004236834.1|//PREDICTED: hsp70 nucleotide exchange factor FES1 [Solanum lycopersicum]
Solyc01g057260.3.1	2238	23.6525251589388	85.2525147030064	1.84974817525612	0.000245901584338411	Up	2.17684886361279e-05	NA	NA	NA	K06997//PLP dependent protein;K07393//putative glutathione S-transferase	gi|971574597|ref|XP_006360885.2|//PREDICTED: putative UPF0481 protein At3g02645 [Solanum tuberosum]
Solyc03g005100.3.1	2915	510.966328338805	248.143515178497	-1.04205347089931	1.3632544165867e-06	Down	5.84961727209785e-08	NA	NA	NA	K14493//gibberellin receptor GID1 [EC:3.-.-.-]	gi|460376442|ref|XP_004234007.1|//PREDICTED: probable carboxylesterase 11 [Solanum lycopersicum]
Solyc00g013140.2.1	1381	125.93584615348	256.306167776934	1.02517920856228	0.000545602581836365	Up	5.51350088341789e-05	GO:0031224//intrinsic component of membrane;GO:0043231//intracellular membrane-bounded organelle	GO:0050136//NADH dehydrogenase (quinone) activity	GO:0022904//respiratory electron transport chain	K03883//NADH-ubiquinone oxidoreductase chain 5 [EC:1.6.5.3]	gi|675895173|ref|YP_009049647.1|//NADH dehydrogenase subunit 5 (mitochondrion) [Capsicum annuum]
Solyc07g052730.3.1	4016	18.4845811186334	3.57671870905659	-2.36961378361006	0.0163870933550632	Down	0.00320281978854602	NA	NA	NA	K19984//exocyst complex component 5;K02184//formin 2	gi|726965367|ref|NP_001289832.1|//formin-like protein 3 [Solanum lycopersicum]
Solyc05g052600.3.1	1612	2925.56273295346	7961.56461060154	1.44433782351803	2.18395285930885e-08	Up	6.24456047055955e-10	GO:0044424//intracellular part	GO:0019203//carbohydrate phosphatase activity;GO:0042132//fructose 1,6-bisphosphate 1-phosphatase activity	GO:0005975//carbohydrate metabolic process;GO:0016311//dephosphorylation	K01100//sedoheptulose-bisphosphatase [EC:3.1.3.37]	gi|350538149|ref|NP_001234585.1|//chloroplast sedoheptulose-1,7-bisphosphatase [Solanum lycopersicum]
Solyc06g076050.3.1	2116	2551.91409960151	5617.48181128269	1.13834378101707	7.15835693289356e-10	Up	1.51876733131377e-11	NA	NA	NA	K19044//E3 ubiquitin-protein ligase XBAT32/33 [EC:2.3.2.27]	gi|525314108|ref|NP_001265951.1|//Hop-interacting protein THI033 [Solanum lycopersicum]
Solyc12g088940.2.1	3706	3409.76899461136	8145.42031709634	1.2563151434058	4.45385472196017e-05	Up	3.02788392873666e-06	NA	NA	NA	K11229//mitogen-activated protein kinase kinase kinase [EC:2.7.11.1];K04421//mitogen-activated protein kinase kinase kinase 3 [EC:2.7.11.25]	gi|460414964|ref|XP_004252831.1|//PREDICTED: mitogen-activated protein kinase kinase kinase YODA-like isoform X1 [Solanum lycopersicum]
Solyc09g098390.3.1	2896	381.070672981403	970.845145208061	1.34918261342395	5.50154486295797e-11	Up	9.35552399569979e-13	NA	GO:0005488//binding	NA	K13155//U11/U12 small nuclear ribonucleoprotein 35 kDa protein	gi|460405041|ref|XP_004247986.1|//PREDICTED: U11/U12 small nuclear ribonucleoprotein 35 kDa protein [Solanum lycopersicum]
Solyc09g075610.3.1	661	55.3056036962262	20.436602636195	-1.43627028139706	0.0215617668229248	Down	0.00449487396410182	NA	NA	NA	K17895//GATA-binding protein 3	gi|460403818|ref|XP_004247383.1|//PREDICTED: GATA transcription factor 23-like [Solanum lycopersicum]
Solyc01g068030.3.1	1207	358.970173791843	740.130094686667	1.04391490147244	0.016419110272357	Up	0.00321038869628166	NA	NA	NA	NA	gi|460366633|ref|XP_004229185.1|//PREDICTED: uncharacterized protein LOC101262041 [Solanum lycopersicum]
Solyc07g047830.3.1	2909	395.121517256226	183.758322271734	-1.1044868237838	0.000833227422333477	Down	9.02506301316057e-05	NA	NA	NA	NA	gi|460395969|ref|XP_004243552.1|//PREDICTED: uncharacterized protein LOC101254220 [Solanum lycopersicum]
Solyc01g107170.2.1	1299	7078.2150909592	2637.41616903868	-1.42426036456077	1.25492743003183e-09	Down	2.76197346338835e-11	NA	NA	NA	NA	gi|525314008|ref|NP_001266186.1|//ZF2 protein [Solanum lycopersicum]
Solyc05g050920.3.1	1979	1511.93273702502	461.600156251173	-1.71167834081648	1.08946440690999e-08	Down	2.94294749496379e-10	NA	NA	NA	K00485//dimethylaniline monooxygenase (N-oxide forming) [EC:1.14.13.8];K11816//indole-3-pyruvate monooxygenase [EC:1.14.13.168]	gi|723702410|ref|XP_010321492.1|//PREDICTED: flavin-containing monooxygenase FMO GS-OX-like 2 [Solanum lycopersicum];gi|460388802|ref|XP_004240053.1|//PREDICTED: flavin-containing monooxygenase FMO GS-OX5-like [Solanum lycopersicum]
Solyc12g100330.2.1	3284	686.83134579033	256.997493289404	-1.41820159525832	0.000282767957248112	Down	2.55533722088023e-05	GO:0043231//intracellular membrane-bounded organelle;GO:0044427//chromosomal part	GO:0016741//transferase activity, transferring one-carbon groups;GO:0003676//nucleic acid binding	GO:0006305//DNA alkylation;GO:0006325//chromatin organization	K00558//DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	gi|460414983|ref|XP_004252840.1|//PREDICTED: DNA (cytosine-5)-methyltransferase CMT3 [Solanum lycopersicum]
Solyc07g040910.3.1	894	86.8559958451274	245.808100084637	1.50083510780571	0.00034134745691286	Up	3.18528229914583e-05	NA	NA	NA	K09422//myb proto-oncogene protein, plant	gi|460396361|ref|XP_004243744.1|//PREDICTED: telomere repeat-binding factor 4 [Solanum lycopersicum]
Solyc01g095630.3.1	1407	16674.9865304915	8183.75789951072	-1.02685022453559	2.25788641071321e-06	Down	1.02445861975927e-07	NA	GO:0003677//DNA binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0010467//gene expression	K18835//WRKY transcription factor 2;K13459//disease resistance protein RPS2;K16225//probable WRKY transcription factor 52	gi|350539793|ref|NP_001234530.1|//WRKY transcription factor [Solanum lycopersicum]
Solyc09g011010.3.1	1008	84.889925892244	242.86230302594	1.51647331221083	0.000352536755697387	Up	3.30785052185584e-05	GO:0043231//intracellular membrane-bounded organelle	NA	NA	NA	gi|970053996|ref|XP_015088629.1|//PREDICTED: high-light-induced protein, chloroplastic [Solanum pennellii]
Solyc12g009240.1.1	747	2636.94596235121	272.821371823205	-3.27283943773205	7.03632461172836e-26	Down	1.50891837046094e-28	NA	NA	NA	K09286//EREBP-like factor	gi|460412633|ref|XP_004251702.1|//PREDICTED: ethylene-responsive transcription factor ERF017 [Solanum lycopersicum]
Solyc12g009820.2.1	2225	88.6102333727197	30.8487588188075	-1.52226087704113	0.00875464740315113	Down	0.00150554903234777	NA	NA	NA	K03715//1,2-diacylglycerol 3-beta-galactosyltransferase [EC:2.4.1.46]	gi|460412699|ref|XP_004251735.1|//PREDICTED: monogalactosyldiacylglycerol synthase 2, chloroplastic-like [Solanum lycopersicum]
Solyc11g068800.2.1	1574	888.34023022743	296.364939948666	-1.58373754145643	8.15008201280447e-10	Down	1.74776025105288e-11	NA	NA	NA	K06620//transcription factor E2F3	gi|460411374|ref|XP_004251087.1|//PREDICTED: transcription factor E2FB-like [Solanum lycopersicum]
Solyc08g066390.3.1	1380	106.435352383583	215.816833829543	1.01982998022029	0.000795972411259077	Up	8.57362307537523e-05	NA	NA	NA	K05287//phosphatidylinositol glycan, class F [EC:2.7.-.-]	gi|460399241|ref|XP_004245150.1|//PREDICTED: protein SAWADEE HOMEODOMAIN HOMOLOG 2-like [Solanum lycopersicum]
Solyc11g065680.1.1	474	62.9590060661371	201.229253498405	1.67635538040586	0.000494498201134016	Up	4.92451745072137e-05	NA	NA	NA	NA	gi|460411063|ref|XP_004250934.1|//PREDICTED: uncharacterized protein LOC101247982 [Solanum lycopersicum]
Solyc05g015530.3.1	721	6971.56022429973	2652.02783108933	-1.39438564956973	8.57568034177104e-17	Down	5.74293115438392e-19	NA	NA	NA	NA	gi|460387092|ref|XP_004239223.1|//PREDICTED: stress-associated endoplasmic reticulum protein 2 [Solanum lycopersicum]
Solyc01g088550.3.1	1381	866.197203571754	1942.71965096817	1.16531030428364	4.76493738381867e-07	Up	1.80881182102071e-08	NA	NA	NA	K15272//solute carrier family 35 (UDP-sugar transporter), member A1/2/3	gi|460367693|ref|XP_004229705.1|//PREDICTED: probable purine permease 11 [Solanum lycopersicum]
Solyc03g117600.3.1	7279	2864.30531080097	968.13856089937	-1.5648998326706	1.30285746693428e-05	Down	7.47991156712458e-07	NA	GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	GO:0008152//metabolic process;GO:0050896//response to stimulus	K03283//heat shock 70kDa protein 1/8	gi|723686193|ref|XP_010318701.1|//PREDICTED: heat shock 70 kDa protein 5 [Solanum lycopersicum];gi|661898277|emb|CDO98244.1|//unnamed protein product [Coffea canephora]
Solyc09g097770.3.1	358	25017.6043536729	62555.4478600961	1.3221918860923	1.94703101690037e-05	Up	1.17715532135399e-06	NA	NA	NA	NA	gi|350539555|ref|NP_001234188.1|//tyrosine- and lysine-rich protein precursor [Solanum lycopersicum]
Solyc08g029160.1.1	303	113.753433368535	242.422836583085	1.09161551899766	0.000184842791249503	Up	1.56747799652513e-05	NA	GO:0005506//iron ion binding;GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	GO:0008152//metabolic process	K17278//membrane-associated progesterone receptor component	gi|460398711|ref|XP_004244897.1|//PREDICTED: probable steroid-binding protein 3 [Solanum lycopersicum]
Solyc09g008970.1.1	411	17.8230635100633	5.01126905602066	-1.83049743168772	0.0326478897017917	Down	0.00749132728710412	NA	NA	GO:0006950//response to stress;GO:0045333//cellular respiration	NA	gi|460402132|ref|XP_004246568.1|//PREDICTED: uncharacterized protein LOC101245195 [Solanum lycopersicum]
Solyc11g068460.2.1	1438	1317.84812574285	500.638786900731	-1.39634214478478	1.78927023655568e-11	Down	2.73977797696826e-13	NA	GO:0046872//metal ion binding	NA	K13448//calcium-binding protein CML	gi|460411317|ref|XP_004251059.1|//PREDICTED: probable calcium-binding protein CML48 [Solanum lycopersicum];gi|971578343|ref|XP_015158694.1|//PREDICTED: probable calcium-binding protein CML48 isoform X1 [Solanum tuberosum]
Solyc11g020180.2.1	2603	486.41984684927	38.0611258898539	-3.67581195080971	2.82628955206214e-17	Down	1.80763440124365e-19	NA	NA	NA	K14318//nuclear pore complex protein Nup88	gi|460410379|ref|XP_004250607.1|//PREDICTED: uncharacterized protein LOC101248262 [Solanum lycopersicum]
Solyc03g059160.2.1	1452	79.174554775527	191.160881937649	1.27167857407182	0.00131920809470771	Up	0.000156339559756557	NA	NA	NA	NA	gi|565350701|ref|XP_006342304.1|//PREDICTED: ion channel CASTOR-like isoform X1 [Solanum tuberosum]
Solyc06g034360.2.1	3260	45.6500404285268	13.7224562814066	-1.73407739487314	0.0481470408823103	Down	0.0122976019770506	NA	GO:0016788//hydrolase activity, acting on ester bonds	NA	K01051//pectinesterase [EC:3.1.1.11]	gi|460390356|ref|XP_004240801.1|//PREDICTED: probable pectinesterase/pectinesterase inhibitor 33 [Solanum lycopersicum]
Solyc02g088860.2.1	2681	2.02440317579207	9.74297854421946	2.26686624604573	0.018783595582691	Up	0.00379487992020506	NA	NA	NA	K17573//meiosis arrest female protein 1	gi|723671085|ref|XP_010316219.1|//PREDICTED: uncharacterized protein LOC101263375 [Solanum lycopersicum]
Solyc01g111500.3.1	1284	620.157408757732	227.869433605596	-1.44442703323466	9.5436816130445e-14	Down	9.51495721390818e-16	NA	NA	NA	K09422//myb proto-oncogene protein, plant	gi|460370387|ref|XP_004231034.1|//PREDICTED: myb-related protein 308-like [Solanum lycopersicum]
Solyc07g066550.3.1	3612	1292.48527806549	444.103876759127	-1.54117877741817	2.31387052586535e-08	Down	6.64462857520307e-10	NA	GO:0004672//protein kinase activity	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460396832|ref|XP_004243974.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g56140 isoform X1 [Solanum lycopersicum]
BGI_novel_G000074	5405	3.2905156685613	59.4598291930651	4.17552972217548	2.18233661083352e-10	Up	4.23659026030886e-12	NA	NA	NA	K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6];K20093//DNA excision repair protein ERCC-6-like [EC:3.6.4.12];K05658//ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:3.6.3.44]	gi|113205226|gb|ABI34306.1|//Polyprotein, putative [Solanum demissum]
Solyc00g118690.1.1	261	101.215313602448	220.522473766972	1.12349810803801	0.000361576567581091	Up	3.4198776933742e-05	GO:0043231//intracellular membrane-bounded organelle;GO:0031224//intrinsic component of membrane	GO:0050136//NADH dehydrogenase (quinone) activity	GO:0008152//metabolic process	K03878//NADH-ubiquinone oxidoreductase chain 1 [EC:1.6.5.3]	gi|57013929|ref|YP_173402.1|//hypothetical protein NitaMp056 [Nicotiana tabacum]
Solyc05g014000.3.1	1788	553.419977126922	153.671909864044	-1.84852124800048	0.00560901078421781	Down	0.000883556363939803	NA	GO:0016837//carbon-oxygen lyase activity, acting on polysaccharides	NA	K01728//pectate lyase [EC:4.2.2.2]	gi|723699027|ref|XP_010320956.1|//PREDICTED: probable pectate lyase 5 [Solanum lycopersicum]
Solyc10g009080.3.1	734	78.9890374123124	259.13598311165	1.71398501307175	2.726705467591e-07	Up	9.79685373043419e-09	NA	GO:0005488//binding	NA	K20641;K13415//protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1]	gi|460405288|ref|XP_004248108.1|//PREDICTED: squamosa promoter-binding protein 1-like [Solanum lycopersicum]
Solyc08g067740.3.1	3604	56.9486629202113	143.163193613233	1.32992675728901	9.45079957777771e-05	Up	7.19299004734548e-06	NA	NA	NA	NA	gi|723722998|ref|XP_010325143.1|//PREDICTED: uncharacterized protein LOC101248410 [Solanum lycopersicum];gi|565380437|ref|XP_006356607.1|//PREDICTED: uncharacterized protein LOC102605890 [Solanum tuberosum]
Solyc10g011660.3.1	2126	4963.42109610568	2238.17926977096	-1.14900926250978	0.00183830854260293	Down	0.000231068052702648	NA	NA	NA	K14506//jasmonic acid-amino synthetase	gi|460405222|ref|XP_004248075.1|//PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.5 [Solanum lycopersicum]
Solyc04g077290.2.1	1199	83.0833514293851	25.2152883149837	-1.72026069165947	0.000933618879397804	Down	0.000103758847620057	NA	NA	NA	K11341//YEATS domain-containing protein 4	gi|460384721|ref|XP_004238058.1|//PREDICTED: transcription initiation factor TFIID subunit 14b [Solanum lycopersicum]
BGI_novel_G000366	506	48.5454078586212	111.470250953681	1.19925200098384	0.00451425340188539	Up	0.000680704576175946	NA	NA	NA	NA	NA
Solyc09g005180.3.1	2056	8.77943130353383	1.31181242830455	-2.74256604223148	0.00417317202683441	Down	0.000619538631222294	NA	GO:0016899//oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor	NA	NA	gi|460402551|ref|XP_004246775.1|//PREDICTED: L-gulonolactone oxidase-like [Solanum lycopersicum]
Solyc01g096510.2.1	754	3825.50811951224	1368.66087945556	-1.48288635865937	4.32704008125221e-20	Down	1.98607558281704e-22	NA	NA	NA	NA	gi|460368360|ref|XP_004230035.1|//PREDICTED: sigma factor binding protein 1, chloroplastic-like [Solanum lycopersicum]
Solyc01g111070.3.1	2552	2.00335655596168	72.0836831390423	5.16918160905972	4.62075702202461e-11	Up	7.77079905509781e-13	NA	GO:0016747//transferase activity, transferring acyl groups other than amino-acyl groups	GO:0008152//metabolic process	K08176//MFS transporter, PHS family, inorganic phosphate transporter;K00660//chalcone synthase [EC:2.3.1.74]	gi|460370166|ref|XP_004230925.1|//PREDICTED: chalcone synthase [Solanum lycopersicum]
Solyc09g011140.3.1	1188	199.171221593455	74.7577722066307	-1.41371372402559	0.00518449935808993	Down	0.000803031747827549	NA	GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K08081//tropinone reductase I [EC:1.1.1.206]	gi|460401849|ref|XP_004246428.1|//PREDICTED: tropinone reductase homolog isoform X1 [Solanum lycopersicum];gi|723727323|ref|XP_010325840.1|//PREDICTED: tropinone reductase homolog isoform X2 [Solanum lycopersicum]
Solyc03g095450.3.1	1923	314.007839002097	650.242486603233	1.05017724875493	6.22239221522038e-11	Up	1.06281642803237e-12	NA	NA	NA	K10601//E3 ubiquitin-protein ligase synoviolin [EC:2.3.2.27]	gi|460378921|ref|XP_004235215.1|//PREDICTED: RING finger and transmembrane domain-containing protein 2-like [Solanum lycopersicum]
Solyc03g032150.3.1	1871	650.530793122922	1634.61859262332	1.32926479515784	1.49640379463436e-14	Up	1.33426523449339e-16	NA	GO:0004713//protein tyrosine kinase activity;GO:0032559//adenyl ribonucleotide binding	GO:0006464//cellular protein modification process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460377464|ref|XP_004234513.1|//PREDICTED: probable serine/threonine-protein kinase Cx32, chloroplastic [Solanum lycopersicum]
Solyc10g084170.1.1	513	436.143072550443	165.345446619539	-1.39931815862135	1.0405113968978e-07	Down	3.413566358521e-09	NA	NA	NA	K01555//fumarylacetoacetase [EC:3.7.1.2]	gi|460408739|ref|XP_004249799.1|//PREDICTED: BAG family molecular chaperone regulator 5, mitochondrial-like [Solanum lycopersicum]
Solyc10g055390.2.1	2043	50.1009319587818	125.635649101656	1.32633654162293	0.00464813396972713	Up	0.000706138636935973	NA	NA	NA	K14794//ribosomal RNA-processing protein 12	gi|460406411|ref|XP_004248658.1|//PREDICTED: probable transporter mch1 [Solanum lycopersicum]
Solyc06g082340.2.1	2012	8.43732245741617	39.7667052454546	2.23670389226483	0.000518587949292009	Up	5.20343890429566e-05	NA	NA	NA	NA	gi|723711717|ref|XP_010323119.1|//PREDICTED: uncharacterized protein LOC104648134 [Solanum lycopersicum]
Solyc05g007590.3.1	1317	256.483953000928	109.510436835092	-1.22780019430996	0.000194823400525107	Down	1.66017683291711e-05	NA	GO:0048037//cofactor binding	NA	K20247//hercynylcysteine sulfoxide lyase [EC:4.4.1.-];K11717//cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]	gi|460386229|ref|XP_004238802.1|//PREDICTED: putative L-cysteine desulfhydrase 1 [Solanum lycopersicum]
Solyc05g043410.1.1	2305	211.361668942993	13.3026002360825	-3.9899335839868	4.57861399324275e-12	Down	6.33908935106596e-14	NA	NA	NA	K10875//DNA repair and recombination protein RAD54 and RAD54-like protein [EC:3.6.4.-]	gi|723726394|ref|XP_010325684.1|//PREDICTED: SNF2 domain-containing protein CLASSY 4-like [Solanum lycopersicum]
Solyc04g076220.3.1	1389	684.355764050048	110.47689458674	-2.63100183640857	3.20175495577653e-14	Down	2.97529523730926e-16	NA	NA	NA	NA	gi|460384578|ref|XP_004237987.1|//PREDICTED: putative DNA-binding protein ESCAROLA [Solanum lycopersicum]
Solyc03g117280.3.1	2317	618.760526293022	1444.1537522438	1.22277127895701	4.71622900511749e-18	Up	2.7679899352834e-20	NA	NA	NA	NA	gi|460380341|ref|XP_004235915.1|//PREDICTED: uncharacterized protein LOC101263891 [Solanum lycopersicum]
Solyc07g054460.3.1	2594	1438.30190232919	652.561456746075	-1.14018084910668	1.08725816075157e-08	Down	2.92880678366487e-10	NA	NA	NA	K14763//H/ACA ribonucleoprotein complex non-core subunit NAF1	gi|723715124|ref|XP_010323718.1|//PREDICTED: H/ACA ribonucleoprotein complex non-core subunit NAF1 isoform X3 [Solanum lycopersicum];gi|460396487|ref|XP_004243804.1|//PREDICTED: uncharacterized protein LOC101262131 isoform X1 [Solanum lycopersicum]
Solyc01g091040.3.1	1838	213.233087888639	461.042426962099	1.11246819740216	4.61233771230601e-06	Up	2.28708092732104e-07	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460367876|ref|XP_004229796.1|//PREDICTED: cysteine-rich repeat secretory protein 15 [Solanum lycopersicum]
Solyc06g075830.2.1	378	2094.19078389926	745.887734173662	-1.48936247239826	0.010401102080631	Down	0.0018539983021906	GO:0043231//intracellular membrane-bounded organelle;GO:0000785//chromatin	GO:0003676//nucleic acid binding	GO:0034728//nucleosome organization	K11254//histone H4	gi|723710790|ref|XP_010322955.1|//PREDICTED: uncharacterized protein LOC101252889 [Solanum lycopersicum]
Solyc02g082285.1.1	472	1.57952693498092	17.3081234961465	3.45388487570836	0.000130666588789988	Up	1.04464447396059e-05	NA	NA	NA	K20308//trafficking protein particle complex subunit 11	gi|723673343|ref|XP_010316494.1|//PREDICTED: trafficking protein particle complex subunit 11 isoform X2 [Solanum lycopersicum]
Solyc05g023990.2.1	785	11.5610023630717	40.7428394467531	1.81728004005924	0.0491291063001765	Up	0.0126223727209897	NA	NA	NA	K08286//protein-serine/threonine kinase [EC:2.7.11.-];K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|970063328|ref|XP_015058591.1|//PREDICTED: receptor-like protein kinase HAIKU2 isoform X2 [Solanum pennellii];gi|970063326|ref|XP_015058589.1|//PREDICTED: receptor-like protein kinase HAIKU2 isoform X1 [Solanum pennellii]
Solyc09g097965.1.1	764	640.008935038779	1682.4796748342	1.39442512494168	9.12231502235982e-05	Up	6.90866069977815e-06	NA	NA	NA	NA	gi|195608730|gb|ACG26195.1|//IN2-2 protein [Zea mays]
Solyc10g006530.3.1	832	85.73601810072	247.121227082856	1.52724562010762	0.00354053820321408	Up	0.000510301048025325	NA	NA	NA	K08901//photosystem II oxygen-evolving enhancer protein 3	gi|460405828|ref|XP_004248376.1|//PREDICTED: psbQ-like protein 2, chloroplastic [Solanum lycopersicum]
Solyc07g008410.3.1	1433	10.7943216061609	2.60504634097732	-2.05089163489826	0.0436932706471782	Down	0.0108366542791623	NA	NA	NA	K03327//multidrug resistance protein, MATE family	gi|460394402|ref|XP_004242792.1|//PREDICTED: protein TRANSPARENT TESTA 12-like [Solanum lycopersicum];gi|565404546|ref|XP_006367697.1|//PREDICTED: protein DETOXIFICATION 32-like [Solanum tuberosum];gi|697165667|ref|XP_009591643.1|//PREDICTED: protein TRANSPARENT TESTA 12 [Nicotiana tomentosiformis]
Solyc01g066613.1.1	4941	129.484344037096	20.5953002674122	-2.65239060695743	0.0061691224007543	Down	0.00098849858182139	NA	NA	NA	K07466//replication factor A1;K15255//ATP-dependent DNA helicase PIF1 [EC:3.6.4.12]	gi|723726857|ref|XP_010325772.1|//PREDICTED: uncharacterized protein LOC101258482 [Solanum lycopersicum];gi|971570010|ref|XP_015169312.1|//PREDICTED: uncharacterized protein LOC107062781 [Solanum tuberosum]
Solyc11g020670.1.1	1125	301.216073019071	1600.9322699203	2.41004161354876	5.79825607636791e-13	Up	6.95877986591935e-15	NA	NA	NA	K16221//transcription factor TCP21 (protein CCA1 HIKING EXPEDITION)	gi|350539914|ref|NP_001233806.1|//TCP transcription factor 12 [Solanum lycopersicum]
Solyc01g088440.2.1	650	132.784071886491	53.917712548145	-1.30025090179462	0.000148867424778189	Down	1.21311829221052e-05	GO:0031410//cytoplasmic vesicle	NA	NA	K19038//E3 ubiquitin-protein ligase ATL41 [EC:2.3.2.27];K10664//E3 ubiquitin-protein ligase ATL6/9/15/31/42/55 [EC:2.3.2.27];K16286//E3 ubiquitin-protein ligase EL5 [EC:2.3.2.27]	gi|460367677|ref|XP_004229697.1|//PREDICTED: RING-H2 finger protein ATL34-like [Solanum lycopersicum]
Solyc10g080230.2.1	1466	417.110036654597	1055.70928398453	1.33971267472835	0.000283063313202724	Up	2.56070969416564e-05	NA	NA	NA	NA	gi|460407663|ref|XP_004249270.1|//PREDICTED: GATA zinc finger domain-containing protein 8-like [Solanum lycopersicum]
Solyc10g078470.2.1	2198	246.322503047302	49.7387884394517	-2.30810516149827	1.64387216893369e-11	Down	2.51095598415003e-13	NA	NA	NA	K03834//tyrosine-specific transport protein	gi|460407393|ref|XP_004249137.1|//PREDICTED: uncharacterized protein LOC101268525 [Solanum lycopersicum]
Solyc03g113870.1.1	1587	762.045428446317	335.507252374803	-1.18353305258488	3.8050870078443e-06	Down	1.84519823074591e-07	NA	NA	NA	K08332//vacuolar protein 8	gi|723687476|ref|XP_004236147.2|//PREDICTED: LOW QUALITY PROTEIN: U-box domain-containing protein 38-like [Solanum lycopersicum]
Solyc06g069430.3.1	1939	598.874471676798	1799.42046061926	1.58720679181076	1.23686161798821e-08	Up	3.3643752814352e-10	GO:0043231//intracellular membrane-bounded organelle;GO:0005634//nucleus	GO:0003677//DNA binding;GO:0003700//transcription factor activity, sequence-specific DNA binding;GO:0001071//nucleic acid binding transcription factor activity;GO:0046983//protein dimerization activity	GO:0006355//regulation of transcription, DNA-templated;GO:0006351//transcription, DNA-templated	K09264//MADS-box transcription factor, plant	gi|806904712|ref|NP_001234173.2|//agamous-like MADS-box protein AGL8 homolog [Solanum lycopersicum]
Solyc07g017880.3.1	1256	39.3725057467987	13.1658700820893	-1.5803856647402	0.0361626834061685	Down	0.00853047497955894	NA	GO:0016209//antioxidant activity;GO:0005506//iron ion binding;GO:0003824//catalytic activity	GO:0008152//metabolic process;GO:0006950//response to stress	K00430//peroxidase [EC:1.11.1.7]	gi|460394645|ref|XP_004242911.1|//PREDICTED: peroxidase 16 [Solanum lycopersicum]
Solyc05g007780.3.1	1047	160.366700936943	448.726195495463	1.48446080034233	0.000107984718532654	Up	8.3527682958291e-06	GO:0009523//photosystem II	GO:0046872//metal ion binding	GO:0044237//cellular metabolic process	K08901//photosystem II oxygen-evolving enhancer protein 3	gi|723697494|ref|XP_010320690.1|//PREDICTED: psbQ-like protein 1, chloroplastic isoform X1 [Solanum lycopersicum]
Solyc05g014190.3.1	1517	95.6815751840484	209.020543363286	1.12733169742754	0.00128183241975772	Up	0.0001510421045403	NA	NA	NA	K07052//uncharacterized protein	gi|460386976|ref|XP_004239168.1|//PREDICTED: uncharacterized protein LOC101254793 [Solanum lycopersicum]
Solyc09g066400.2.1	1555	173.495218200918	4.59655931519626	-5.23819773256165	6.02918359431689e-15	Down	4.94492860632461e-17	NA	GO:0046872//metal ion binding	NA	K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30];K15472//premnaspirodiene oxygenase [EC:1.14.13.121]	gi|460403753|ref|XP_004247352.1|//PREDICTED: premnaspirodiene oxygenase-like [Solanum lycopersicum]
Solyc06g075130.3.1	2625	39.85759297116	150.137170019061	1.91335470204623	7.05852594959047e-06	Up	3.73693464631725e-07	NA	NA	NA	NA	gi|723707403|ref|XP_010322400.1|//PREDICTED: protein ENHANCED DISEASE RESISTANCE 2-like [Solanum lycopersicum]
Solyc11g022530.2.1	1436	20.2569268286738	61.951996832661	1.61273546398964	0.00136037693364172	Up	0.00016234445573783	NA	NA	NA	NA	gi|460410420|ref|XP_004250627.1|//PREDICTED: uncharacterized protein LOC101264586 [Solanum lycopersicum]
Solyc11g073110.2.1	2155	1150.61196531408	486.073484104092	-1.24315503749633	1.68839102996161e-06	Down	7.40020899136671e-08	NA	NA	NA	NA	gi|460412131|ref|XP_004251456.1|//PREDICTED: protein UPSTREAM OF FLC [Solanum lycopersicum]
Solyc09g083380.3.1	644	2687.67833931983	640.026307071469	-2.0701573763651	0.0344400986702185	Down	0.0080308401639584	GO:0043229//intracellular organelle	NA	NA	K11275//histone H1/5	gi|970054065|ref|XP_015088663.1|//PREDICTED: histone H1-like [Solanum pennellii]
Solyc08g005320.3.1	1581	84.1840602129991	41.0699227867509	-1.03546485781934	0.0348628030292667	Down	0.00815718120636418	NA	NA	NA	K06911//uncharacterized protein;K05350//beta-glucosidase [EC:3.2.1.21]	gi|460397718|ref|XP_004244414.1|//PREDICTED: F-box/LRR-repeat protein At3g03360 [Solanum lycopersicum]
Solyc04g074220.3.1	2828	1636.80392622205	742.165342319235	-1.14106897414738	0.00194480980668514	Down	0.000248011014890073	NA	NA	NA	K06630//14-3-3 protein epsilon	gi|460384433|ref|XP_004237916.1|//PREDICTED: monoacylglycerol lipase abhd6-A isoform X2 [Solanum lycopersicum];gi|460384431|ref|XP_004237915.1|//PREDICTED: monoacylglycerol lipase abhd6-A isoform X1 [Solanum lycopersicum]
Solyc02g082435.1.1	1391	2.79469150337748	127.158831555496	5.50779881711325	3.04884702822256e-21	Up	1.15851598890323e-23	NA	NA	NA	K08739//DNA mismatch repair protein MLH3	gi|565347678|ref|XP_006340851.1|//PREDICTED: DNA mismatch repair protein MLH3 isoform X5 [Solanum tuberosum]
Solyc02g092700.3.1	1692	615.771680538189	1413.82147576937	1.19913253734199	1.2384587295574e-13	Up	1.25339759066772e-15	NA	NA	NA	NA	gi|723669428|ref|XP_010316003.1|//PREDICTED: uncharacterized protein LOC101254550 [Solanum lycopersicum]
Solyc03g025680.3.1	1797	41.7358180367711	670.859954919797	4.00665367505107	6.80545771913317e-16	Up	4.96711360990156e-18	NA	NA	NA	NA	gi|460377233|ref|XP_004234398.1|//PREDICTED: uncharacterized protein LOC101252153 [Solanum lycopersicum]
Solyc12g006370.3.1	2610	699.235771497439	1592.41923669662	1.18736930743063	6.14386305495363e-05	Up	4.38946423677838e-06	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K17839//polyamine oxidase [EC:1.5.3.17 1.5.3.-]	gi|460412333|ref|XP_004251556.1|//PREDICTED: probable polyamine oxidase 2 [Solanum lycopersicum];gi|970069165|ref|XP_015061716.1|//PREDICTED: probable polyamine oxidase 2 [Solanum pennellii]
Solyc09g084480.3.1	585	1669.2644652297	371.422925601636	-2.16807777052048	0.0313058880871902	Down	0.00709270346354625	NA	GO:0016787//hydrolase activity;GO:0004866//endopeptidase inhibitor activity	GO:0006950//response to stress;GO:0051346//negative regulation of hydrolase activity	NA	gi|460404373|ref|XP_004247657.1|//PREDICTED: wound-induced proteinase inhibitor 1-like [Solanum lycopersicum]
BGI_novel_G000419	1332	81.0054152091381	191.743562033558	1.24308787828247	0.00281334092136069	Up	0.000385802394972149	NA	NA	NA	K12741//heterogeneous nuclear ribonucleoprotein A1/A3;K14850//ribosomal RNA-processing protein 8 [EC:2.1.1.287]	gi|255633684|gb|ACU17202.1|//unknown [Glycine max]
Solyc08g077550.3.1	1273	672.419900941364	256.201322315414	-1.39208450142467	4.17517185093355e-10	Down	8.49799838734031e-12	NA	NA	NA	K08494//novel plant SNARE	gi|460400642|ref|XP_004245842.1|//PREDICTED: novel plant SNARE 11 [Solanum lycopersicum]
Solyc09g011600.3.1	1105	268.203249371296	853.331724468818	1.6697799682718	1.80219035467532e-05	Up	1.07670364304906e-06	NA	GO:0016765//transferase activity, transferring alkyl or aryl (other than methyl) groups	GO:0006950//response to stress	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|350536817|ref|NP_001234778.1|//glutathione S-transferase-like protein [Solanum lycopersicum]
Solyc03g113255.1.1	2951	22.9213980595396	62.1697228298632	1.43951710494596	0.00866108623153455	Up	0.00148717823779999	NA	NA	NA	K01213//galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67];K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460380892|ref|XP_004236187.1|//PREDICTED: uncharacterized protein LOC101245045 [Solanum lycopersicum];gi|970019383|ref|XP_015070893.1|//PREDICTED: protein NRT1/ PTR FAMILY 4.6 [Solanum pennellii];gi|971586122|ref|XP_015160700.1|//PREDICTED: protein NRT1/ PTR FAMILY 4.6-like isoform X2 [Solanum tuberosum]
Solyc01g014840.3.1	4744	1328.06688431479	3071.26742221021	1.20950633075701	2.85130643231032e-05	Up	1.83684860308519e-06	NA	NA	NA	K03283//heat shock 70kDa protein 1/8;K19613//leucine-rich repeat protein SHOC2	gi|460365849|ref|XP_004228809.1|//PREDICTED: TMV resistance protein N-like [Solanum lycopersicum]
Solyc01g086640.2.1	2162	1499.11825322031	633.428562118469	-1.2428603632845	5.94684331920307e-09	Down	1.51915222488295e-10	NA	NA	NA	NA	gi|460367463|ref|XP_004229593.1|//PREDICTED: uncharacterized protein At1g04910-like [Solanum lycopersicum]
BGI_novel_G000425	3317	218.344999568181	647.083276927112	1.56734190142829	3.56178943652032e-06	Up	1.70585325533874e-07	NA	NA	NA	NA	gi|460400215|ref|XP_004245631.1|//PREDICTED: uncharacterized protein LOC101265850 [Solanum lycopersicum]
Solyc06g068540.3.1	2347	874.499483523528	288.16414714571	-1.60156668288726	5.0715186290709e-19	Down	2.65214856825002e-21	NA	NA	NA	NA	gi|723709062|ref|XP_010322653.1|//PREDICTED: uncharacterized protein LOC101256298 isoform X2 [Solanum lycopersicum];gi|460392138|ref|XP_004241674.1|//PREDICTED: uncharacterized protein LOC101256298 isoform X1 [Solanum lycopersicum]
Solyc12g021365.1.1	674	230.261938899444	637.375416346474	1.46886741439872	1.77656686229647e-07	Up	6.10903729171923e-09	NA	GO:0003676//nucleic acid binding;GO:0016788//hydrolase activity, acting on ester bonds	GO:0006281//DNA repair	K06195//ApaG protein	gi|460413284|ref|XP_004252020.1|//PREDICTED: uncharacterized protein LOC101252057 isoform X1 [Solanum lycopersicum]
Solyc10g084020.1.1	396	51.6419165073996	11.9239098890912	-2.11468516436738	0.00370525226546967	Down	0.000539017528250221	NA	NA	NA	K14488//SAUR family protein	gi|460408731|ref|XP_004249795.1|//PREDICTED: auxin-induced protein X15-like [Solanum lycopersicum]
Solyc11g066320.2.1	1692	380.896228461351	180.143604663803	-1.08025056767658	0.0111050582940273	Down	0.00199790777885772	NA	NA	NA	K20889	gi|723745091|ref|XP_004250976.2|//PREDICTED: probable glucuronoxylan glucuronosyltransferase IRX7 [Solanum lycopersicum]
Solyc08g075790.3.1	1809	1893.7489931849	768.3216770415	-1.30146275875844	7.82133190162316e-06	Down	4.21080735561427e-07	NA	NA	NA	K03386//peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15];K19525//vacuolar protein sorting-associated protein 13A/C;K13217//pre-mRNA-processing factor 39	gi|723725874|ref|XP_004245944.2|//PREDICTED: uncharacterized protein LOC101257692 [Solanum lycopersicum]
Solyc03g097980.3.1	4503	472.784066628368	149.428293750362	-1.66172807233854	7.64811409088049e-09	Down	2.00842123229292e-10	NA	GO:0019001//guanyl nucleotide binding	GO:0007165//signal transduction	K04630//guanine nucleotide-binding protein G(i) subunit alpha;K19729//guanine nucleotide-binding protein G(t) subunit alpha 3	gi|971580330|ref|XP_015159201.1|//PREDICTED: extra-large guanine nucleotide-binding protein 3-like isoform X1 [Solanum tuberosum];gi|723683943|ref|XP_010318330.1|//PREDICTED: extra-large guanine nucleotide-binding protein 3-like [Solanum lycopersicum];gi|970018592|ref|XP_015070468.1|//PREDICTED: extra-large guanine nucleotide-binding protein 3-like [Solanum pennellii]
Solyc03g007890.3.1	3336	135.437226409329	31.350271354656	-2.11107449844775	0.000355303732191074	Down	3.34317018137651e-05	GO:0044424//intracellular part	GO:0005515//protein binding;GO:0032559//adenyl ribonucleotide binding	GO:0044267//cellular protein metabolic process;GO:0050896//response to stimulus	K04079//molecular chaperone HtpG	gi|970014193|ref|XP_015068083.1|//PREDICTED: heat shock protein 83 [Solanum pennellii]
Solyc01g104870.3.1	3841	13.6000576255169	46.8173815832709	1.78343148481267	0.00493845536558105	Up	0.000757118345174672	NA	GO:0005488//binding	NA	K20043//clathrin coat assembly protein AP180;K20044//phosphatidylinositol-binding clathrin assembly protein	gi|460369424|ref|XP_004230562.1|//PREDICTED: putative clathrin assembly protein At1g03050 [Solanum lycopersicum]
Solyc06g065825.1.1	2233	230.865065801562	472.97668254253	1.03471917843676	1.53190851800369e-08	Up	4.25338030958136e-10	NA	NA	NA	NA	gi|723709524|ref|XP_010322726.1|//PREDICTED: uncharacterized protein LOC101267126 [Solanum lycopersicum]
Solyc08g082135.1.1	1162	397.369855169584	145.830711944894	-1.44618784940217	2.55688784353147e-08	Down	7.38784749372525e-10	NA	NA	NA	K07020//uncharacterized protein	gi|460401170|ref|XP_004246101.1|//PREDICTED: KAT8 regulatory NSL complex subunit 3 [Solanum lycopersicum]
Solyc03g097440.3.1	1392	16.4949708288544	50.5607641253276	1.61599204062686	0.0134568224092537	Up	0.00251700960039098	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K11165//dehydrogenase/reductase SDR family member 7 [EC:1.1.-.-]	gi|460379156|ref|XP_004235330.1|//PREDICTED: 11-beta-hydroxysteroid dehydrogenase 1B-like [Solanum lycopersicum]
Solyc03g098720.3.1	820	151.42437546267	31.5300659307177	-2.26379736925214	0.00992444510924269	Down	0.00175003289040709	NA	NA	NA	NA	gi|970016602|ref|XP_015069411.1|//PREDICTED: kunitz-type serine protease inhibitor DrTI-like [Solanum pennellii]
Solyc03g119980.3.1	1085	2335.93967001723	433.81110298513	-2.42886413140749	2.38836415336088e-27	Down	4.49278433664575e-30	NA	NA	NA	K18368//caffeoylshikimate esterase [EC:3.1.1.-]	gi|460379951|ref|XP_004235722.1|//PREDICTED: caffeoylshikimate esterase [Solanum lycopersicum]
Solyc01g008250.3.1	1009	257.050213825386	656.503219324966	1.35275187356108	1.1210434055023e-05	Up	6.3083986670837e-07	NA	NA	NA	K03671//thioredoxin 1	gi|460365282|ref|XP_004228532.1|//PREDICTED: thioredoxin X, chloroplastic [Solanum lycopersicum]
Solyc01g079880.3.1	1227	2842.1651604501	8006.96428158704	1.49426497731198	1.08859057213065e-20	Up	4.66889861636172e-23	NA	NA	NA	K01953//asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4];K13783//MFS transporter, OPA family, solute carrier family 37 (glycerol-3-phosphate transporter), member 1/2	gi|460367130|ref|XP_004229428.1|//PREDICTED: stem-specific protein TSJT1 [Solanum lycopersicum]
Solyc06g071330.3.1	1894	165.202093468388	60.3549978818315	-1.45268682109049	0.0366386686265294	Down	0.00867445980687546	GO:0044464//cell part;GO:0016021//integral component of membrane	GO:0005215//transporter activity	GO:0006810//transport;GO:0055085//transmembrane transport	K14611//solute carrier family 23 (nucleobase transporter), member 1/2	gi|460391769|ref|XP_004241491.1|//PREDICTED: nucleobase-ascorbate transporter 6 [Solanum lycopersicum];gi|694188335|gb|AIS71908.1|//nucleobase-ascorbate transporter 6-like isoform 1 [Nicotiana tabacum]
Solyc09g011350.2.1	657	11.5549546391192	3.07219682932527	-1.91116904164572	0.0462760505470956	Down	0.0116682502169539	NA	NA	NA	NA	gi|460402723|ref|XP_004246860.1|//PREDICTED: protein MIZU-KUSSEI 1 [Solanum lycopersicum]
Solyc02g080110.3.1	1725	387.243457199985	842.637154489873	1.12167066651973	5.2933259772565e-05	Up	3.70288589371038e-06	GO:0016021//integral component of membrane	NA	NA	NA	gi|723674018|ref|XP_010316617.1|//PREDICTED: uncharacterized protein LOC101263370 isoform X1 [Solanum lycopersicum];gi|460373897|ref|XP_004232749.1|//PREDICTED: uncharacterized protein LOC101263370 isoform X2 [Solanum lycopersicum]
Solyc04g081610.1.1	567	748.814734537659	1.75061224166494	-8.74060544901658	7.57607024277302e-50	Down	3.99040569596773e-53	NA	NA	NA	NA	gi|970022990|ref|XP_015072832.1|//PREDICTED: uncharacterized protein LOC107017067 [Solanum pennellii]
Solyc03g111570.3.1	7662	2059.56460859838	4307.53792320522	1.06452411357402	3.12291486694426e-08	Up	9.19955733941818e-10	GO:0016021//integral component of membrane;GO:0000148//1,3-beta-D-glucan synthase complex	GO:0003843//1,3-beta-D-glucan synthase activity	GO:0006075//(1->3)-beta-D-glucan biosynthetic process	K11000//callose synthase [EC:2.4.1.-]	gi|460381149|ref|XP_004236315.1|//PREDICTED: callose synthase 10 [Solanum lycopersicum];gi|747053634|ref|XP_011072986.1|//PREDICTED: callose synthase 10 [Sesamum indicum];gi|698489029|ref|XP_009791092.1|//PREDICTED: callose synthase 10 [Nicotiana sylvestris]
Solyc01g096450.3.1	1832	1632.77087750618	511.255256378823	-1.67520667940478	0.0024536468487817	Down	0.000326229795470072	NA	NA	NA	K00924;K02882//large subunit ribosomal protein L18Ae;K01381//saccharopepsin [EC:3.4.23.25]	gi|460368352|ref|XP_004230031.1|//PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2-like [Solanum lycopersicum]
Solyc01g079780.3.1	2267	1575.60038605139	579.791019207891	-1.44229678378796	7.21137794226041e-13	Down	8.79039297702172e-15	NA	NA	NA	NA	gi|460367112|ref|XP_004229419.1|//PREDICTED: uncharacterized GPI-anchored protein At5g19250-like [Solanum lycopersicum]
Solyc02g092357.1.1	2194	150.681949911824	57.8592028040824	-1.38088825705924	0.000609760924367736	Down	6.28378161593754e-05	NA	NA	NA	NA	gi|698573116|ref|XP_009775318.1|//PREDICTED: uncharacterized protein LOC104225254 isoform X1 [Nicotiana sylvestris];gi|698573127|ref|XP_009775321.1|//PREDICTED: uncharacterized protein LOC104225254 isoform X2 [Nicotiana sylvestris]
Solyc09g011210.3.1	1552	133.697151695906	343.99585726103	1.36342246030081	2.31517261404819e-09	Up	5.33935595339181e-11	NA	NA	NA	K13195//cold-inducible RNA-binding protein	gi|460401893|ref|XP_004246450.1|//PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial isoform X1 [Solanum lycopersicum]
Solyc06g050430.3.1	1187	188.601930960054	71.2933795576122	-1.40350443028532	0.00288224048790181	Down	0.000397853286309696	NA	NA	NA	K13944	gi|460390530|ref|XP_004240882.1|//PREDICTED: LOB domain-containing protein 15 [Solanum lycopersicum]
Solyc08g078695.1.1	913	313.482519303978	32.9614285827856	-3.24953431950274	1.56463910853578e-13	Down	1.61879516496366e-15	NA	NA	NA	K13993//HSP20 family protein	gi|350539261|ref|NP_001233872.1|//mitochondrial small heat shock protein [Solanum lycopersicum]
Solyc03g043770.3.1	3456	60.549733655513	15.0470734255386	-2.0086376959666	0.043530167626304	Down	0.0107848501016769	NA	NA	NA	K00924	gi|460377726|ref|XP_004234641.1|//PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 [Solanum lycopersicum]
Solyc10g086600.2.1	1570	69.0673589975681	28.2819539912577	-1.28812225989698	0.0220670821910749	Down	0.00462429073755784	NA	NA	NA	K12663//Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase [EC:5.3.3.-]	gi|723739982|ref|XP_004249838.2|//PREDICTED: subtilisin-like protease SBT5.3 [Solanum lycopersicum]
Solyc04g077750.2.1	3524	232.933518816965	61.7692625109913	-1.91495724537531	7.36743681503826e-07	Down	2.92147419226875e-08	NA	NA	NA	K03549//KUP system potassium uptake protein;K12447//UDP-sugar pyrophosphorylase [EC:2.7.7.64];K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|697102004|ref|XP_009598759.1|//PREDICTED: uncharacterized protein LOC104094510 [Nicotiana tomentosiformis]
Solyc07g049680.3.1	2529	94.7410574891239	21.8820462316685	-2.11424212162069	0.0149704130785313	Down	0.00286608731506859	GO:0000793//condensed chromosome	NA	GO:0009987//cellular process	K06676//condensin complex subunit 2	gi|460395853|ref|XP_004243494.1|//PREDICTED: condensin complex subunit 2 [Solanum lycopersicum]
Solyc07g008310.3.1	1625	122.908681141704	283.187608903636	1.20417132249459	0.000442682269417001	Up	4.31023970372911e-05	NA	GO:0046872//metal ion binding;GO:0051536//iron-sulfur cluster binding	GO:0008152//metabolic process	K00499//choline monooxygenase [EC:1.14.15.7]	gi|460394388|ref|XP_004242785.1|//PREDICTED: choline monooxygenase, chloroplastic-like isoform X2 [Solanum lycopersicum]
Solyc12g088250.2.1	1629	87.2175601701426	239.604262864889	1.45796303768744	1.21591688401833e-06	Up	5.13722596219935e-08	NA	NA	NA	K16296//serine carboxypeptidase-like clade I [EC:3.4.16.-]	gi|723752276|ref|XP_010314600.1|//PREDICTED: serine carboxypeptidase-like 11 [Solanum lycopersicum]
Solyc04g006960.3.1	2633	309.370512674556	144.234599613542	-1.10091840841671	0.0172419724565711	Down	0.00341790642865587	NA	GO:0000166//nucleotide binding;GO:0017111//nucleoside-triphosphatase activity	NA	K05681//ATP-binding cassette, subfamily G (WHITE), member 2	gi|460382514|ref|XP_004236984.1|//PREDICTED: ABC transporter G family member 21 [Solanum lycopersicum]
Solyc06g051980.3.1	2020	1021.58299069193	460.610008857455	-1.14918874382266	2.71758489052332e-07	Down	9.73341164702107e-09	NA	GO:0005509//calcium ion binding;GO:0004721//phosphoprotein phosphatase activity	GO:0006470//protein dephosphorylation	K06268//serine/threonine-protein phosphatase 2B regulatory subunit;K04506//E3 ubiquitin-protein ligase SIAH1 [EC:2.3.2.27]	gi|970031904|ref|XP_015077249.1|//PREDICTED: E3 ubiquitin-protein ligase SINAT3 [Solanum pennellii];gi|460390683|ref|XP_004240957.1|//PREDICTED: calcineurin B-like protein 4 [Solanum lycopersicum];gi|460390685|ref|XP_004240958.1|//PREDICTED: E3 ubiquitin-protein ligase SINAT3 [Solanum lycopersicum]
Solyc11g022460.2.1	2829	251.235815461798	97.8027513317884	-1.36109518944024	0.000116015972040818	Down	9.0481982709035e-06	NA	NA	NA	K12486//stromal membrane-associated protein;K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K18999//RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16]	gi|460410022|ref|XP_004250430.1|//PREDICTED: multiple C2 and transmembrane domain-containing protein 1-like [Solanum lycopersicum]
Solyc01g057770.3.1	7112	5746.04357760666	15334.0794279503	1.41610071856672	5.45661232118596e-17	Up	3.55151968233699e-19	GO:0031224//intrinsic component of membrane;GO:0005887//integral component of plasma membrane	GO:0015301//anion:anion antiporter activity;GO:0005452//inorganic anion exchanger activity	GO:0051453//regulation of intracellular pH;GO:0006811//ion transport;GO:0098656//anion transmembrane transport;GO:0015698//inorganic anion transport	K13024//inositol-hexakisphosphate/diphosphoinositol-pentakisphosphate 1-kinase [EC:2.7.4.24];K13855//solute carrier family 4 (anion exchanger), member 2;K08247//methionine S-methyltransferase [EC:2.1.1.12];K13862//solute carrier family 4 (sodium borate transporter), member 11;K06573	gi|590662363|ref|XP_007035927.1|//HCO3- transporter family isoform 2 [Theobroma cacao];gi|460366320|ref|XP_004229035.1|//PREDICTED: boron transporter 1 isoform X2 [Solanum lycopersicum]
Solyc08g044270.3.1	785	8.16050853043579	1.61122908809793	-2.34049742383054	0.0181791826012787	Down	0.00364831859118924	NA	NA	NA	K00264//glutamate synthase (NADPH/NADH) [EC:1.4.1.13 1.4.1.14]	gi|970015944|ref|XP_015069058.1|//PREDICTED: glutamate synthase 1 [NADH], chloroplastic isoform X1 [Solanum pennellii]
Solyc03g080010.3.1	3726	262.738152195799	546.079470613859	1.05548521158915	6.79784573612148e-06	Up	3.57027563868532e-07	NA	NA	NA	K07456//DNA mismatch repair protein MutS2	gi|723682531|ref|XP_010318067.1|//PREDICTED: uncharacterized protein LOC101255670 isoform X1 [Solanum lycopersicum];gi|723682534|ref|XP_010318068.1|//PREDICTED: uncharacterized protein LOC101255670 isoform X2 [Solanum lycopersicum]
Solyc11g071205.1.1	917	45.0808514462682	111.204559391043	1.3026292706274	0.000292309974921108	Up	2.66356192347225e-05	GO:0005856//cytoskeleton;GO:0005938//cell cortex;GO:0015629//actin cytoskeleton	GO:0003785//actin monomer binding	GO:0042989//sequestering of actin monomers;GO:0007010//cytoskeleton organization	K05759//profilin	gi|350539449|ref|NP_001234138.1|//profilin [Solanum lycopersicum]
Solyc09g075470.2.1	460	21.775320653378	5.84335799314419	-1.89782437967596	0.00879145938940368	Down	0.00151353341481984	NA	GO:0005515//protein binding	NA	K09510//DnaJ homolog subfamily B member 4;K09512//DnaJ homolog subfamily B member 6;K09514//DnaJ homolog subfamily B member 8	gi|460403838|ref|XP_004247393.1|//PREDICTED: dnaJ homolog subfamily B member 6-like [Solanum lycopersicum]
Solyc12g042770.2.1	1460	3476.725161161	7266.49755882186	1.06353112979166	1.55704164155387e-10	Up	2.92640088581553e-12	NA	NA	NA	NA	gi|460413902|ref|XP_004252315.1|//PREDICTED: uncharacterized protein LOC101260209 [Solanum lycopersicum]
Solyc07g041900.3.1	1552	1450.49444223662	5776.31421641684	1.99360445553682	7.18269502520435e-20	Up	3.40488928960026e-22	GO:0043231//intracellular membrane-bounded organelle	GO:0004175//endopeptidase activity	GO:0019538//protein metabolic process	K01366//cathepsin H [EC:3.4.22.16]	gi|823683759|ref|NP_001296313.1|//cysteine proteinase 3 precursor [Solanum lycopersicum]
Solyc01g105420.3.1	1194	1471.35571054811	3135.95141843051	1.09175713927582	6.08814604586721e-10	Up	1.2712268831664e-11	NA	NA	NA	K01626//3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]	gi|970003426|ref|XP_015062485.1|//PREDICTED: phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic-like [Solanum pennellii]
Solyc07g039570.3.1	2217	1111.94326518818	539.28681912498	-1.04395850110198	0.000304848723246918	Down	2.79616699501876e-05	NA	NA	NA	K13422//transcription factor MYC2	gi|723717169|ref|XP_010324053.1|//PREDICTED: putative transcription factor bHLH041 [Solanum lycopersicum]
BGI_novel_G000107	1118	7.07921606307029	1.16761388770233	-2.60002633265799	0.00724819287479485	Down	0.00120203288909314	NA	NA	NA	K10268//F-box and leucine-rich repeat protein 2/20	gi|970007879|ref|XP_015064855.1|//PREDICTED: uncharacterized protein LOC107010111 [Solanum pennellii]
Solyc12g044630.2.1	800	19.0780646312265	3.70251287490187	-2.3653381676044	0.00682808215684589	Down	0.00111874709529962	GO:0005856//cytoskeleton	GO:0008092//cytoskeletal protein binding	GO:0007010//cytoskeleton organization	K05759//profilin	gi|350539215|ref|NP_001233869.1|//profilin-1 [Solanum lycopersicum]
Solyc02g091840.3.1	3884	613.444467305936	241.758624873978	-1.34336538876878	0.00133971728652362	Down	0.000159223736197446	NA	NA	NA	K00924	gi|567757509|ref|NP_001274713.1|//leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1-like precursor [Solanum lycopersicum]
Solyc02g081330.4.1	2088	377.730660058028	771.163588353154	1.0296790433731	9.47922103465779e-06	Up	5.24602488411648e-07	GO:0009536//plastid;GO:0009507//chloroplast	GO:0004337//geranyltranstransferase activity;GO:0016767//geranylgeranyl-diphosphate geranylgeranyltransferase activity	GO:0016117//carotenoid biosynthetic process;GO:0016109//tetraterpenoid biosynthetic process	K02291//phytoene synthase [EC:2.5.1.32]	gi|350534780|ref|NP_001234671.1|//phytoene synthase 2, chloroplastic [Solanum lycopersicum]
Solyc01g108300.3.1	1794	107.547766177865	245.368016811103	1.18996964952788	2.04156339651164e-06	Up	9.15554390008228e-08	NA	NA	NA	K14491//two-component response regulator ARR-B family	gi|856116669|ref|NP_001297051.1|//Myb family transcription factor [Solanum lycopersicum];gi|460369903|ref|XP_004230796.1|//PREDICTED: uncharacterized protein LOC101243935 isoform X1 [Solanum lycopersicum]
Solyc03g025340.1.1	1050	5771.17881149785	2478.93107761625	-1.21914787114204	5.86932907824729e-09	Down	1.49493445672439e-10	NA	NA	NA	K19747//BAHD acyltransferase [EC:2.3.1.-];K05747//Wiskott-Aldrich syndrome protein;K01759//lactoylglutathione lyase [EC:4.4.1.5]	gi|460377282|ref|XP_004234422.1|//PREDICTED: probable calcium-binding protein CML50 [Solanum lycopersicum]
Solyc01g006430.3.1	1319	6245.83719785633	2118.65917377569	-1.55974344327553	4.21289422646836e-14	Down	3.9941660837849e-16	NA	GO:0016705//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	GO:0044238//primary metabolic process	K10256//omega-6 fatty acid desaturase / acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.6 1.14.19.22]	gi|460365552|ref|XP_004228665.1|//PREDICTED: omega-6 fatty acid desaturase, endoplasmic reticulum isozyme 2-like [Solanum lycopersicum]
Solyc11g005820.1.1	573	91.6150977507273	40.7531953360049	-1.16867218630813	0.0140167221624589	Down	0.00264250544605272	NA	NA	NA	K21232	gi|460408939|ref|XP_004249898.1|//PREDICTED: cell wall / vacuolar inhibitor of fructosidase 2 [Solanum lycopersicum]
Solyc12g096350.2.1	1347	374.71145959965	1653.59508913717	2.14175400472934	2.61475906779195e-13	Up	2.8823341115991e-15	NA	NA	NA	K13425//WRKY transcription factor 22	gi|460415433|ref|XP_004253063.1|//PREDICTED: probable WRKY transcription factor 17 [Solanum lycopersicum]
Solyc12g042470.2.1	1210	87.9774088138568	313.762422096587	1.83446756211086	2.72509959117835e-12	Up	3.64987003182653e-14	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K19642//D-galacturonate reductase [EC:1.1.1.365];K00011//aldehyde reductase [EC:1.1.1.21]	gi|460413859|ref|XP_004252294.1|//PREDICTED: methylecgonone reductase-like [Solanum lycopersicum]
Solyc07g063530.3.1	1205	730.122512874587	1841.70089561783	1.33482830693574	1.37727793267303e-11	Up	2.08819791898883e-13	NA	NA	NA	NA	gi|460397271|ref|XP_004244191.1|//PREDICTED: uncharacterized protein LOC101244304 [Solanum lycopersicum]
Solyc01g058250.2.1	1987	7.37735601506003	24.061618654787	1.70555793390084	0.0356054629010196	Up	0.00837759838160183	NA	NA	NA	K04124//gibberellin 3-beta-dioxygenase [EC:1.14.11.15]	gi|460366455|ref|XP_004229097.1|//PREDICTED: gibberellin 3-beta-dioxygenase 1-like [Solanum lycopersicum]
Solyc08g081780.1.1	570	11.6300191354721	2.47305197294665	-2.2334890061321	0.0238756651240625	Down	0.00508143858565921	NA	NA	NA	K01870//isoleucyl-tRNA synthetase [EC:6.1.1.5];K19027//zinc finger FYVE domain-containing protein 26;K14440//SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:3.6.4.12]	gi|460400061|ref|XP_004245554.1|//PREDICTED: disease resistance response protein 206-like [Solanum lycopersicum]
Solyc04g071130.1.1	1134	434.495670838206	200.978468827421	-1.11230085134999	9.35755605179903e-06	Down	5.1684367360637e-07	NA	NA	NA	NA	gi|460384143|ref|XP_004237773.1|//PREDICTED: SKP1-interacting partner 15 [Solanum lycopersicum]
Solyc02g089990.1.1	486	363.202234134092	162.962762217482	-1.15623073768698	0.000184552812548973	Down	1.56432463007087e-05	NA	NA	NA	NA	gi|460372532|ref|XP_004232083.1|//PREDICTED: uncharacterized protein LOC101260191 [Solanum lycopersicum]
Solyc11g008120.2.1	1278	151.328514236708	74.4056282536321	-1.02420019438543	0.00469255074068141	Down	0.000714122187586769	NA	NA	NA	K14318//nuclear pore complex protein Nup88	gi|723743078|ref|XP_010312895.1|//PREDICTED: uncharacterized protein LOC101254353 [Solanum lycopersicum]
Solyc12g005940.2.1	1189	21.1490822188491	114.072989953957	2.4312902697858	7.83060903041029e-09	Up	2.06518319425042e-10	NA	GO:0043169//cation binding;GO:0016641//oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor;GO:0019842//vitamin binding	GO:0003006//developmental process involved in reproduction;GO:0009692//ethylene metabolic process	K05933//aminocyclopropanecarboxylate oxidase [EC:1.14.17.4]	gi|460412275|ref|XP_004251527.1|//PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase 2 [Solanum lycopersicum]
Solyc01g091320.3.1	1629	494.712685642815	124.528643521091	-1.99011327148077	0.0459502827457825	Down	0.0115722796350741	GO:0031224//intrinsic component of membrane	GO:0046914//transition metal ion binding;GO:0003824//catalytic activity	GO:0006631//fatty acid metabolic process	K14423//4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha-methyl oxidase [EC:1.14.13.72]	gi|723660662|ref|XP_010325726.1|//PREDICTED: methylsterol monooxygenase 1-1-like [Solanum lycopersicum]
Solyc08g013970.2.1	2909	37.7295031637978	13.9848862580036	-1.4318245822033	0.0142490293296601	Down	0.0026943424157589	NA	NA	NA	K13459//disease resistance protein RPS2	gi|723720535|ref|XP_004244820.2|//PREDICTED: disease resistance protein At4g27190-like [Solanum lycopersicum]
Solyc08g075840.3.1	3282	32.4072553053241	8.09948885551268	-2.00041406841891	0.00271462589969668	Down	0.000369546676588682	NA	NA	NA	K07466//replication factor A1	gi|460400800|ref|XP_004245920.1|//PREDICTED: replication protein A 70 kDa DNA-binding subunit A-like [Solanum lycopersicum]
Solyc07g061990.3.1	2066	319.842695745759	726.917374307419	1.18442885150003	3.32584613854849e-09	Up	7.88293102816233e-11	NA	GO:0016765//transferase activity, transferring alkyl or aryl (other than methyl) groups	GO:0006720//isoprenoid metabolic process	K05356//all-trans-nonaprenyl-diphosphate synthase [EC:2.5.1.84 2.5.1.85]	gi|998070225|ref|NP_001307204.1|//solanesyl diphosphate synthase [Solanum lycopersicum]
Solyc10g055780.1.1	751	32.6187634420835	5.10398426837214	-2.67600630386416	0.00370146629849549	Down	0.000538106901092348	GO:0043231//intracellular membrane-bounded organelle;GO:0005618//cell wall;GO:0030312//external encapsulating structure;GO:0005576//extracellular region;GO:0005773//vacuole	GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0008061//chitin binding;GO:0030247//polysaccharide binding;GO:0004568//chitinase activity	GO:0033554//cellular response to stress;GO:0009626//plant-type hypersensitive response;GO:0006032//chitin catabolic process;GO:0016998//cell wall macromolecule catabolic process;GO:0000272//polysaccharide catabolic process;GO:0006026//aminoglycan catabolic process;GO:0009607//response to biotic stimulus	K20547;K01183//chitinase [EC:3.2.1.14]	gi|460406368|ref|XP_004248637.1|//PREDICTED: endochitinase 4 [Solanum lycopersicum]
Solyc06g076020.3.1	2355	69431.6558274367	33616.3176872905	-1.04643187646506	5.16173730854865e-05	Down	3.5984571981718e-06	NA	GO:0032559//adenyl ribonucleotide binding	GO:0050896//response to stimulus	K03283//heat shock 70kDa protein 1/8	gi|807045793|ref|NP_001234491.2|//heat shock cognate 70 kDa protein 1 [Solanum lycopersicum]
Solyc06g075140.3.1	985	18.934349402703	47.1554340297812	1.31641818160916	0.0222898549240753	Up	0.00468019865806111	NA	NA	NA	K19027//zinc finger FYVE domain-containing protein 26;K17895//GATA-binding protein 3	gi|970034990|ref|XP_015078825.1|//PREDICTED: putative GATA transcription factor 13 [Solanum pennellii];gi|723707399|ref|XP_004242094.2|//PREDICTED: GATA transcription factor 11-like [Solanum lycopersicum]
Solyc09g008200.3.1	1581	11236.4018167131	4739.84340364196	-1.24526882082215	2.86839784673316e-05	Down	1.85075331344897e-06	NA	NA	NA	K07213//copper chaperone	gi|971562765|ref|XP_015167314.1|//PREDICTED: uncharacterized protein LOC102588920 isoform X1 [Solanum tuberosum];gi|460402253|ref|XP_004246628.1|//PREDICTED: neurofilament medium polypeptide [Solanum lycopersicum]
Solyc03g025170.1.1	1896	1392.53292954763	657.033590478734	-1.08367240918001	2.6497311382731e-05	Down	1.68673630020997e-06	NA	NA	NA	K14777//ATP-dependent RNA helicase DDX47/RRP3 [EC:3.6.4.13];K14494//DELLA protein	gi|350538113|ref|NP_001234327.1|//GRAS10 protein [Solanum lycopersicum]
Solyc08g067630.3.1	744	10812.251021022	5044.92889476924	-1.09976107081859	0.00323250273867787	Down	0.000455444798959692	NA	NA	NA	NA	gi|460399394|ref|XP_004245226.1|//PREDICTED: uncharacterized protein LOC101248124 [Solanum lycopersicum]
Solyc10g079220.2.1	984	3.11490936398814	13.9551380523268	2.16353430626839	0.0104445723283673	Up	0.00186296905224941	NA	GO:0003676//nucleic acid binding	NA	NA	gi|133711808|gb|ABO36626.1|//hypothetical protein LYC_68t000011 [Solanum lycopersicum]
Solyc10g077070.2.1	2438	591.464300293017	2.69390203083895	-7.77844989727506	2.3138351773909e-31	Down	3.56912122923352e-34	GO:0043229//intracellular organelle	GO:0008168//methyltransferase activity	GO:0032259//methylation	K11420//euchromatic histone-lysine N-methyltransferase [EC:2.1.1.43]	gi|460407325|ref|XP_004249103.1|//PREDICTED: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1-like [Solanum lycopersicum]
Solyc09g007770.2.1	1112	414.420330102677	78.7484384208551	-2.39577155835187	2.84648401967592e-11	Down	4.51924851882331e-13	GO:0016021//integral component of membrane	GO:0005215//transporter activity	GO:0006810//transport	K09872//aquaporin PIP	gi|723728331|ref|XP_010325989.1|//PREDICTED: aquaporin PIP2-1-like [Solanum lycopersicum]
Solyc11g071480.1.1	1332	188.435804052258	37.3602353416176	-2.33449766452895	0.0183976062579312	Down	0.00370167036371016	NA	NA	NA	K13065//shikimate O-hydroxycinnamoyltransferase [EC:2.3.1.133]	gi|460411607|ref|XP_004251198.1|//PREDICTED: agmatine coumaroyltransferase-2-like [Solanum lycopersicum]
Solyc11g011630.2.1	1630	329.792505783167	1254.22878616469	1.92717001637744	0.000449294048417907	Up	4.39151970575516e-05	NA	NA	NA	K14488//SAUR family protein;K09494//T-complex protein 1 subunit beta	gi|971559109|ref|XP_015166369.1|//PREDICTED: auxin-responsive protein SAUR21-like [Solanum tuberosum];gi|460409578|ref|XP_004250215.1|//PREDICTED: auxin-induced protein 6B-like [Solanum lycopersicum]
Solyc03g025810.3.1	2059	1.82865048827099	11.2206206677231	2.61730121785836	0.00366761693832382	Up	0.000532324714125303	NA	NA	NA	NA	gi|460377332|ref|XP_004234447.1|//PREDICTED: low-temperature-induced 65 kDa protein-like [Solanum lycopersicum]
Solyc07g062730.1.1	2142	153.986278406944	53.9488573754716	-1.51313749005963	0.0322863465858519	Down	0.00738407452578608	NA	NA	NA	NA	gi|460397400|ref|XP_004244255.1|//PREDICTED: uncharacterized protein LOC101262936 [Solanum lycopersicum]
Solyc08g015960.3.1	1363	406.566838881185	847.839658656611	1.06029890330599	8.62691420532563e-07	Up	3.47283604202348e-08	NA	NA	NA	K15437//aminoacyl tRNA synthase complex-interacting multifunctional protein 1	gi|460398484|ref|XP_004244789.1|//PREDICTED: aminoacyl tRNA synthase complex-interacting multifunctional protein 1 [Solanum lycopersicum]
Solyc11g007490.1.1	1332	85.9247871127743	20.8143394750563	-2.04549659564788	7.88165193507497e-06	Down	4.24921264972251e-07	NA	NA	NA	K13080//flavanone 7-O-glucoside 2''-O-beta-L-rhamnosyltransferase [EC:2.4.1.236];K18823//soyasaponin III rhamnosyltransferase [EC:2.4.1.273]	gi|460410134|ref|XP_004250486.1|//PREDICTED: crocetin glucoside glucosyltransferase-like [Solanum lycopersicum]
Solyc02g069260.3.1	3630	7674.76051135231	3509.51659508605	-1.12884940659533	9.52978143236978e-05	Down	7.26744430527221e-06	NA	NA	NA	K11593//eukaryotic translation initiation factor 2C	gi|806933776|ref|NP_001266235.2|//Argonaute 2A [Solanum lycopersicum]
Solyc04g082320.3.1	3108	107.02765725867	47.8185328833178	-1.16234188226137	0.00115862867574063	Down	0.000133647686975951	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial;K17710//pentatricopeptide repeat domain-containing protein 1	gi|460385457|ref|XP_004238420.1|//PREDICTED: pentatricopeptide repeat-containing protein At1g76280 isoform X1 [Solanum lycopersicum]
Solyc09g048980.3.1	3281	41.9585355585585	9.14093017953989	-2.19855143941793	0.0135440245629531	Down	0.00253657465291123	NA	NA	NA	K02150//V-type H+-transporting ATPase subunit E;K10523//speckle-type POZ protein	gi|460403021|ref|XP_004247004.1|//PREDICTED: BTB/POZ domain-containing protein At3g08570 [Solanum lycopersicum]
Solyc12g049360.2.1	2363	80.4080921876953	213.471622448661	1.40863169477752	0.000123045965640148	Up	9.72146455396204e-06	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460414316|ref|XP_004252518.1|//PREDICTED: putative receptor-like protein kinase At1g72540 [Solanum lycopersicum]
Solyc06g048700.1.1	234	494.364892051572	153.028191083104	-1.69177883921796	9.62024408094342e-10	Down	2.08474815298097e-11	NA	NA	NA	NA	NA
Solyc04g051820.3.1	602	8418.23457684847	26852.2155054811	1.6734515095654	4.52661582857277e-09	Up	1.12399038632732e-10	NA	NA	NA	NA	gi|460383502|ref|XP_004237461.1|//PREDICTED: uncharacterized protein LOC101256083 [Solanum lycopersicum]
Solyc03g005280.3.1	1857	641.552353226197	214.739991088433	-1.57897611006067	0.00102121684675592	Down	0.000115172282344173	NA	NA	NA	K08245//phytepsin [EC:3.4.23.40]	gi|460376472|ref|XP_004234022.1|//PREDICTED: aspartic proteinase A1 [Solanum lycopersicum]
Solyc11g069160.2.1	3635	1177.8221758417	493.035299556452	-1.25635889452153	9.83695658486925e-07	Down	4.01916284844545e-08	GO:0005634//nucleus	GO:0008270//zinc ion binding;GO:0019789//SUMO transferase activity;GO:0016874//ligase activity	GO:0016925//protein sumoylation;GO:0016049//cell growth;GO:0031668//cellular response to extracellular stimulus	K04706//E3 SUMO-protein ligase PIAS1;K10706//senataxin [EC:3.6.4.-]	gi|723745731|ref|XP_010313400.1|//PREDICTED: E3 SUMO-protein ligase SIZ1 isoform X2 [Solanum lycopersicum];gi|723745728|ref|XP_010313399.1|//PREDICTED: E3 SUMO-protein ligase SIZ1 isoform X1 [Solanum lycopersicum]
Solyc08g075240.3.1	2633	97.6112553545921	10.1513795939903	-3.26537170555335	4.35176705120828e-07	Down	1.63559641992365e-08	NA	NA	NA	K17756//long-chain-alcohol oxidase [EC:1.1.3.20]	gi|460401007|ref|XP_004246021.1|//PREDICTED: long-chain-alcohol oxidase FAO4A-like [Solanum lycopersicum]
Solyc11g012980.1.1	660	5.08640811322959	17.9962399630048	1.82297638122751	0.0189645904836981	Up	0.00383644104705961	NA	NA	NA	K09286//EREBP-like factor	gi|723742378|ref|XP_010312777.1|//PREDICTED: ethylene-responsive transcription factor ERF014 [Solanum lycopersicum]
Solyc10g083700.3.1	1854	107.692481254632	45.5669225353221	-1.24085868572729	0.00359624831520306	Down	0.000519818887396921	NA	GO:0005506//iron ion binding;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K20618;K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30]	gi|460408054|ref|XP_004249463.1|//PREDICTED: cytochrome P450 76A2-like [Solanum lycopersicum]
Solyc03g025927.1.1	636	9.72527418774911	50.4019184605947	2.37366781828069	0.00122073517964436	Up	0.000141959835977453	NA	NA	NA	K17278//membrane-associated progesterone receptor component	gi|723679557|ref|XP_010317593.1|//PREDICTED: uncharacterized protein LOC101247404 isoform X2 [Solanum lycopersicum];gi|723679554|ref|XP_010317592.1|//PREDICTED: uncharacterized protein LOC101247404 isoform X1 [Solanum lycopersicum]
Solyc08g061610.3.1	3608	5075.93111426764	2175.36460432917	-1.22241526473551	1.90892162913179e-13	Down	2.04271777588501e-15	GO:0016020//membrane	GO:0046873//metal ion transmembrane transporter activity;GO:0015662//ATPase activity, coupled to transmembrane movement of ions, phosphorylative mechanism;GO:0000166//nucleotide binding	GO:0008152//metabolic process;GO:0009987//cellular process;GO:0030001//metal ion transport	K01533//Cu2+-exporting ATPase [EC:3.6.3.4]	gi|460399025|ref|XP_004245045.1|//PREDICTED: copper-transporting ATPase PAA2, chloroplastic [Solanum lycopersicum]
Solyc09g010810.3.1	2498	115.722405724299	32.8903444863987	-1.81493219667729	0.0444511567116441	Down	0.011087695148314	GO:0005874//microtubule;GO:0005871//kinesin complex;GO:0009507//chloroplast	GO:0005524//ATP binding;GO:0003777//microtubule motor activity;GO:0005488//binding;GO:0008017//microtubule binding;GO:0016887//ATPase activity	GO:0007018//microtubule-based movement	K10403//kinesin family member 22	gi|460402749|ref|XP_004246873.1|//PREDICTED: kinesin-like protein KIF22 [Solanum lycopersicum]
Solyc09g010360.3.1	2371	13.9777107483822	38.2096488161799	1.45080890067764	0.0338938988766029	Up	0.00786394561219	NA	NA	NA	K07874//Ras-related protein Rab-1A;K00801//farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]	gi|460401940|ref|XP_004246473.1|//PREDICTED: WAT1-related protein At2g37460-like [Solanum lycopersicum]
Solyc07g018144.1.1	1563	35.3279211531349	119.450302839663	1.75752974897509	0.0334122158676326	Up	0.00771321883234739	NA	NA	NA	K00430//peroxidase [EC:1.11.1.7];K17086//transmembrane 9 superfamily member 2/4;K14808//ATP-dependent RNA helicase DDX54/DBP10 [EC:3.6.4.13];K11275//histone H1/5;K01051//pectinesterase [EC:3.1.1.11]	gi|723721428|ref|XP_010324936.1|//PREDICTED: WW domain-binding protein 11-like [Solanum lycopersicum]
Solyc05g056140.3.1	3325	454.075607463715	186.303745721617	-1.28527585794239	7.01745121694198e-08	Down	2.23354542119372e-09	NA	NA	NA	NA	gi|460388007|ref|XP_004239663.1|//PREDICTED: uncharacterized protein LOC101250694 [Solanum lycopersicum]
Solyc03g026100.1.1	2546	107.779177598698	49.3240175267564	-1.12771626384894	0.00188573909272586	Down	0.000239016365816156	NA	GO:0008270//zinc ion binding;GO:0003824//catalytic activity	NA	K15442//tRNA-specific adenosine deaminase 3	gi|460377316|ref|XP_004234439.1|//PREDICTED: probable inactive tRNA-specific adenosine deaminase-like protein 3 [Solanum lycopersicum]
Solyc01g087180.3.1	703	41.1402522898409	115.953266125704	1.49492091158583	0.00554956048710407	Up	0.000871477256327028	NA	NA	NA	K10999//cellulose synthase A [EC:2.4.1.12]	gi|460367534|ref|XP_004229628.1|//PREDICTED: uncharacterized protein LOC101246280 [Solanum lycopersicum]
Solyc09g064930.3.1	1191	2144.51217160696	1006.7049105734	-1.0910086476104	2.80565702297566e-05	Down	1.80182714003742e-06	NA	NA	NA	NA	gi|723730350|ref|XP_010326360.1|//PREDICTED: uncharacterized protein LOC101252813 isoform X1 [Solanum lycopersicum]
Solyc02g086210.3.1	10576	2300.22443154303	4626.37239870917	1.00810676908838	1.20621782403629e-06	Up	5.08862731908751e-08	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460373061|ref|XP_004232341.1|//PREDICTED: probable receptor-like protein kinase At1g67000 [Solanum lycopersicum]
Solyc03g093340.3.1	1238	148.291824595163	337.397826735667	1.18601161743089	5.04425177881206e-09	Up	1.26580735006307e-10	NA	NA	NA	NA	gi|460378834|ref|XP_004235173.1|//PREDICTED: uncharacterized protein LOC101263682 isoform X1 [Solanum lycopersicum];gi|565384645|ref|XP_006358240.1|//PREDICTED: uncharacterized protein LOC102592161 isoform X1 [Solanum tuberosum];gi|565384648|ref|XP_006358241.1|//PREDICTED: uncharacterized protein LOC102592161 isoform X2 [Solanum tuberosum]
Solyc09g063090.3.1	3149	2857.40007781375	1074.19553557779	-1.41144641813896	6.32398560007982e-07	Down	2.46487926323653e-08	NA	NA	NA	K09338//homeobox-leucine zipper protein	gi|460403267|ref|XP_004247114.1|//PREDICTED: uncharacterized protein LOC101266067 isoform X1 [Solanum lycopersicum];gi|723730192|ref|XP_010326332.1|//PREDICTED: uncharacterized protein LOC101266067 isoform X2 [Solanum lycopersicum]
Solyc10g012430.3.1	2552	1434.88593312649	3002.11732754513	1.06504430709185	2.24441895974746e-06	Up	1.01328169740291e-07	GO:0031224//intrinsic component of membrane	GO:0004175//endopeptidase activity	NA	K09597//signal peptide peptidase-like 2B [EC:3.4.23.-]	gi|723733589|ref|XP_010326969.1|//PREDICTED: signal peptide peptidase-like 4 isoform X2 [Solanum lycopersicum];gi|460405162|ref|XP_004248045.1|//PREDICTED: signal peptide peptidase-like 4 isoform X1 [Solanum lycopersicum]
Solyc09g009860.1.1	1200	26.6172433956333	6.52536490104185	-2.02823068169986	0.0127763638233174	Down	0.00236252175288205	NA	NA	NA	K17479//glutaredoxin domain-containing cysteine-rich protein 1	gi|460402018|ref|XP_004246512.1|//PREDICTED: glutaredoxin domain-containing cysteine-rich protein 1 [Solanum lycopersicum]
Solyc12g011160.2.1	1753	5059.50432567452	2096.46445414566	-1.27103768323334	9.87159789756553e-11	Down	1.75296998030509e-12	NA	NA	NA	K05605//3-hydroxyisobutyryl-CoA hydrolase [EC:3.1.2.4]	gi|460412872|ref|XP_004251820.1|//PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 [Solanum lycopersicum]
Solyc06g066370.3.1	2026	25115.0482353493	11321.2674835257	-1.1495165602772	1.73711967032507e-06	Down	7.64019195673925e-08	NA	GO:0003677//DNA binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0010467//gene expression	K13424//WRKY transcription factor 33	gi|987437813|ref|NP_001306910.1|//defense-related WRKY1 [Solanum lycopersicum]
Solyc08g074560.3.1	2978	622.026482745871	1259.41326790555	1.01770386187694	4.74917522447552e-06	Up	2.37101411695975e-07	NA	GO:0032559//adenyl ribonucleotide binding;GO:0016301//kinase activity	GO:0006464//cellular protein modification process	K08869//aarF domain-containing kinase	gi|970414563|ref|NP_001305094.1|//aarF domain-containing protein kinase [Solanum lycopersicum]
Solyc07g045530.2.1	630	362.918551593894	740.18673356591	1.02824347223283	0.000850133408061986	Up	9.26894889602571e-05	NA	NA	NA	NA	gi|723716158|ref|XP_010323892.1|//PREDICTED: uncharacterized protein LOC104648416 [Solanum lycopersicum]
Solyc04g018120.1.1	2766	243.571690697019	111.972314473021	-1.12120439944148	0.00336626909508281	Down	0.000480117612470238	NA	NA	NA	K18443//golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1	gi|460381652|ref|XP_004236559.1|//PREDICTED: uncharacterized protein LOC101251767 [Solanum lycopersicum]
Solyc09g092170.2.1	2022	139.654820114241	283.032610311573	1.01910291800484	4.54118078289007e-05	Up	3.10091915761681e-06	GO:0005774//vacuolar membrane;GO:0009505//plant-type cell wall;GO:0016021//integral component of membrane	GO:0030246//carbohydrate binding;GO:0004565//beta-galactosidase activity	GO:0005975//carbohydrate metabolic process	K12309//beta-galactosidase [EC:3.2.1.23]	gi|7939617|gb|AAF70821.1|AF154420_1//beta-galactosidase [Solanum lycopersicum];gi|802083972|ref|NP_001234298.2|//beta-galactosidase [Solanum lycopersicum]
Solyc04g064870.3.1	950	6641.83893472836	3209.9214937352	-1.04904472452248	2.37568030735129e-08	Down	6.83745460919388e-10	NA	NA	NA	NA	gi|460384084|ref|XP_004237744.1|//PREDICTED: pathogen-related protein [Solanum lycopersicum]
Solyc11g007500.2.1	588	874.45799069309	413.150842422616	-1.08172046872286	0.0152377825181954	Down	0.00292487458268747	NA	NA	NA	K13080//flavanone 7-O-glucoside 2''-O-beta-L-rhamnosyltransferase [EC:2.4.1.236];K18823//soyasaponin III rhamnosyltransferase [EC:2.4.1.273]	gi|460409136|ref|XP_004249996.1|//PREDICTED: crocetin glucoside glucosyltransferase-like [Solanum lycopersicum]
Solyc09g014160.2.1	2726	86.4260796662005	22.4520177264681	-1.94462161781518	0.0385867237562035	Down	0.00925326475628445	NA	NA	NA	NA	gi|460402699|ref|XP_004246848.1|//PREDICTED: UPF0503 protein At3g09070, chloroplastic [Solanum lycopersicum]
Solyc03g098140.3.1	1249	356.905539887402	145.269071342886	-1.29681471784001	1.12514683972438e-05	Down	6.34112101545193e-07	NA	GO:0030246//carbohydrate binding;GO:0016861//intramolecular oxidoreductase activity, interconverting aldoses and ketoses	GO:0044238//primary metabolic process	K06041//arabinose-5-phosphate isomerase [EC:5.3.1.13]	gi|460379251|ref|XP_004235377.1|//PREDICTED: probable arabinose 5-phosphate isomerase [Solanum lycopersicum]
Solyc12g096810.2.1	2829	101.710564497669	30.0689812221908	-1.75812164378731	0.0201937888305654	Down	0.00414330497397881	NA	NA	NA	K17800//LETM1 and EF-hand domain-containing protein 1, mitochondrial	gi|723753341|ref|XP_010314779.1|//PREDICTED: LETM1 and EF-hand domain-containing protein 1, mitochondrial-like isoform X1 [Solanum lycopersicum];gi|723753347|ref|XP_010314781.1|//PREDICTED: LETM1 and EF-hand domain-containing protein 1, mitochondrial-like isoform X2 [Solanum lycopersicum]
Solyc00g036320.2.1	531	1.10091395614898	4.89587307704054	2.15286444043748	0.0325305835080666	Up	0.00745222746762615	NA	NA	NA	NA	gi|970067690|ref|XP_015060951.1|//PREDICTED: AT-rich interactive domain-containing protein 5-like [Solanum pennellii]
Solyc01g094260.3.1	1171	51.9291086463993	13.3297905307937	-1.96188935247595	0.0090263570038264	Down	0.00156280266860832	NA	GO:0016616//oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	GO:0008152//metabolic process;GO:0006950//response to stress	K15095//(+)-neomenthol dehydrogenase [EC:1.1.1.208]	gi|723660961|ref|XP_010326206.1|//PREDICTED: (+)-neomenthol dehydrogenase [Solanum lycopersicum]
Solyc02g072080.1.1	2175	7542.9082621228	2969.26012127474	-1.34501739398604	1.41582443773406e-07	Down	4.79398793815145e-09	GO:0043234//protein complex	GO:0019787//ubiquitin-like protein transferase activity	GO:0032446//protein modification by small protein conjugation	K08332//vacuolar protein 8	gi|460374471|ref|XP_004233034.1|//PREDICTED: U-box domain-containing protein 17 [Solanum lycopersicum]
Solyc02g087100.1.1	294	13.7719498278204	3.44570601313975	-1.9988613086802	0.0287378334574125	Down	0.00637573378097672	NA	GO:0016209//antioxidant activity;GO:0005506//iron ion binding	GO:0008152//metabolic process;GO:0006950//response to stress	K10529//alpha-dioxygenase [EC:1.-.-.-]	gi|565342813|ref|XP_006338535.1|//PREDICTED: alpha-dioxygenase 1-like [Solanum tuberosum]
Solyc02g087990.3.1	2157	22.8123937070905	54.7627485905915	1.26337702179885	0.00660597760788741	Up	0.00107664014286562	NA	NA	NA	NA	gi|723671416|ref|XP_004233680.2|//PREDICTED: uncharacterized protein LOC101244638 isoform X1 [Solanum lycopersicum]
Solyc09g065560.3.1	9837	3157.62093231819	638.008534596334	-2.30719036014163	7.13187335755025e-06	Down	3.78595685007653e-07	NA	NA	NA	K17471//sulfate transporter 3;K20478//golgin subfamily B member 1	gi|460403704|ref|XP_004247328.1|//PREDICTED: centrosome-associated protein CEP250-like [Solanum lycopersicum]
Solyc01g106820.3.1	2050	42.9619601250828	97.2112766665844	1.17806386121105	0.00486044906854543	Up	0.000743147667967217	NA	GO:0016787//hydrolase activity	NA	NA	gi|460369668|ref|XP_004230679.1|//PREDICTED: probable zinc metallopeptidase EGY3, chloroplastic [Solanum lycopersicum]
Solyc11g006250.2.1	1460	180.215068345991	26.625791320763	-2.75882333633668	0.000321441235174628	Down	2.973754692605e-05	NA	GO:0016787//hydrolase activity	GO:0044238//primary metabolic process	K21026;K01188//beta-glucosidase [EC:3.2.1.21];K00679//phospholipid:diacylglycerol acyltransferase [EC:2.3.1.158];K10960//geranylgeranyl reductase [EC:1.3.1.83]	gi|999808283|ref|NP_001307298.1|//GDSL esterase/lipase precursor [Solanum lycopersicum]
Solyc05g016180.3.1	3357	234.81289083595	913.726990788401	1.96025155981598	7.1459043764145e-18	Up	4.27463805812606e-20	NA	NA	NA	K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|971578596|ref|XP_015158764.1|//PREDICTED: uncharacterized protein LOC107058020 [Solanum tuberosum]
Solyc06g083850.3.1	1283	79.8317512666794	29.6663102741318	-1.42813715596105	0.0291601446458186	Down	0.00649795096829133	NA	NA	NA	K12581//CCR4-NOT transcription complex subunit 7/8;K13126//polyadenylate-binding protein;K05941//glutathione gamma-glutamylcysteinyltransferase [EC:2.3.2.15];K01054//acylglycerol lipase [EC:3.1.1.23]	gi|460393536|ref|XP_004242365.1|//PREDICTED: protein CUP-SHAPED COTYLEDON 3-like [Solanum lycopersicum]
Solyc02g090150.1.1	1359	13.5566266046006	34.0781344916076	1.32984813489633	0.0436932706471782	Up	0.0108378379750506	NA	NA	NA	K10260//F-box and WD-40 domain protein 7;K03362//F-box and WD-40 domain protein 1/11;K14963//COMPASS component SWD3;K16794//platelet-activating factor acetylhydrolase IB subunit alpha	gi|460372510|ref|XP_004232072.1|//PREDICTED: F-box/WD repeat-containing protein sel-10 [Solanum lycopersicum]
Solyc11g008830.2.1	1981	112.199816752503	235.705544077803	1.07091537320554	0.000661858676536758	Up	6.92237441975992e-05	GO:0031981//nuclear lumen	GO:0005488//binding	GO:0048437//floral organ development;GO:0009943//adaxial/abaxial axis specification	K13944	gi|971560509|ref|XP_015166711.1|//PREDICTED: LOB domain-containing protein 6 [Solanum tuberosum]
Solyc11g008250.2.1	3048	4417.39660057105	980.228006089726	-2.17200709386099	3.14435646397724e-22	Down	1.01736138413109e-24	NA	NA	NA	NA	gi|460409230|ref|XP_004250042.1|//PREDICTED: uncharacterized protein ycf45 [Solanum lycopersicum]
Solyc09g075670.1.1	951	945.675804221719	447.593275808673	-1.07915732195217	0.000203925355963489	Down	1.7523156998518e-05	NA	NA	NA	K13258//2-hydroxyisoflavanone dehydratase [EC:4.2.1.105]	gi|460403808|ref|XP_004247378.1|//PREDICTED: 2-hydroxyisoflavanone dehydratase-like [Solanum lycopersicum]
Solyc05g006000.2.1	1894	126.378365460026	48.3217530646817	-1.38700481140366	0.0469124837371849	Down	0.0118869668160248	NA	NA	NA	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460386030|ref|XP_004238703.1|//PREDICTED: protein NRT1/ PTR FAMILY 1.1-like [Solanum lycopersicum]
Solyc04g076070.1.1	1905	78.2876303009749	16.8589694200939	-2.21526802724731	0.00187970251208792	Down	0.00023783226741701	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial;K14442//ATP-dependent RNA helicase DHX36 [EC:3.6.4.13]	gi|698499314|ref|XP_009795490.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g18475 [Nicotiana sylvestris];gi|460384557|ref|XP_004237977.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g18475 [Solanum lycopersicum]
Solyc05g055550.3.1	926	562.413511321035	1369.74089548816	1.28419985526044	9.94421471794048e-10	Up	2.16243645860406e-11	NA	NA	NA	NA	gi|460388095|ref|XP_004239705.1|//PREDICTED: uncharacterized protein LOC101264329 [Solanum lycopersicum]
Solyc07g062260.3.1	1557	188.70248324202	390.901361620604	1.05069120165499	0.0190548418991682	Up	0.00385899977213027	NA	NA	NA	K14503//brassinosteroid resistant 1/2	gi|460397464|ref|XP_004244287.1|//PREDICTED: BES1/BZR1 homolog protein 4 [Solanum lycopersicum]
Solyc10g009507.1.1	1644	196.319734981267	18.0496607599251	-3.44316157928104	9.77143253441707e-13	Down	1.22051000806112e-14	NA	NA	NA	K08695//anthocyanidin reductase [EC:1.3.1.77]	gi|723733768|ref|XP_010327005.1|//PREDICTED: anthocyanidin reductase-like [Solanum lycopersicum];gi|723735179|ref|XP_010327251.1|//PREDICTED: anthocyanidin reductase-like [Solanum lycopersicum];gi|970056136|ref|XP_015089715.1|//PREDICTED: dihydroflavonol-4-reductase-like [Solanum pennellii]
Solyc01g017450.1.1	423	1.05860758104097	4.56851664898927	2.10955792212804	0.0367578709196096	Up	0.00870683052332061	GO:0044424//intracellular part	NA	NA	K02948//small subunit ribosomal protein S11	gi|91209020|ref|YP_538882.1|//ribosomal protein S11 [Solanum bulbocastanum]
Solyc02g083250.3.1	1072	1304.4124745719	442.285659356128	-1.56034977303399	0.00127623003593319	Down	0.000150205669148803	NA	NA	NA	K18470//Rho GTPase-activating protein 1	gi|460373458|ref|XP_004232536.1|//PREDICTED: ganglioside-induced differentiation-associated protein 2 [Solanum lycopersicum]
Solyc06g082940.3.1	877	8241.73714100234	17130.4678916147	1.05554420022299	0.00462578181496975	Up	0.000701698731300151	NA	NA	NA	K02699//photosystem I subunit XI	gi|460393734|ref|XP_004242464.1|//PREDICTED: photosystem I reaction center subunit XI, chloroplastic [Solanum lycopersicum]
Solyc03g082920.3.1	2166	22589.9879845951	4368.65677372951	-2.3704218342724	6.29139323511117e-23	Down	1.89357207979268e-25	GO:0044432//endoplasmic reticulum part	GO:0032559//adenyl ribonucleotide binding;GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	GO:0008152//metabolic process;GO:0050896//response to stimulus	K09490//heat shock 70kDa protein 5	gi|460378451|ref|XP_004234985.1|//PREDICTED: luminal-binding protein 5 [Solanum lycopersicum]
Solyc08g036640.3.1	589	2374.01540644088	6670.3910934682	1.49044205338254	2.10054816182035e-06	Up	9.4358709752201e-08	NA	NA	NA	K13464//jasmonate ZIM domain-containing protein	gi|460398761|ref|XP_004244920.1|//PREDICTED: protein TIFY 5A-like [Solanum lycopersicum]
Solyc02g089610.2.1	1392	4271.22784953188	14286.2798581098	1.74190752208302	2.41807330775147e-11	Up	3.77539662421693e-13	NA	GO:0016831//carboxy-lyase activity	GO:0006596//polyamine biosynthetic process	K01611//S-adenosylmethionine decarboxylase [EC:4.1.1.50]	gi|992319510|ref|NP_001307075.1|//S-adenosylmethionine decarboxylase 2 [Solanum lycopersicum]
Solyc10g079790.1.1	3506	75.4908640925055	20.2790361805261	-1.89631297424539	0.00628984639383447	Down	0.00101328526179079	NA	NA	NA	K12472//epidermal growth factor receptor substrate 15;K20478//golgin subfamily B member 1	gi|460408643|ref|XP_004249752.1|//PREDICTED: uncharacterized protein LOC101258807 [Solanum lycopersicum]
Solyc01g008640.3.1	1993	31.0384862900993	6.31162433501175	-2.29797495625521	0.0028901644009676	Down	0.000399164541608429	NA	GO:0005506//iron ion binding;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30];K15472//premnaspirodiene oxygenase [EC:1.14.13.121]	gi|460365239|ref|XP_004228511.1|//PREDICTED: premnaspirodiene oxygenase-like [Solanum lycopersicum]
Solyc06g072230.1.1	603	692.048068475233	137.630786140831	-2.33006903101365	2.84112024532949e-24	Down	7.6960367819309e-27	NA	NA	NA	NA	gi|460391744|ref|XP_004241479.1|//PREDICTED: miraculin-like [Solanum lycopersicum]
Solyc11g027840.2.1	1604	59.0249936364305	139.555430569596	1.24144037956876	0.000361654486718779	Up	3.42197529758363e-05	NA	NA	NA	K01061//carboxymethylenebutenolidase [EC:3.1.1.45]	gi|460410432|ref|XP_004250633.1|//PREDICTED: carboxymethylenebutenolidase homolog [Solanum lycopersicum]
BGI_novel_G000015	458	9.05621470510054	42.2658093185349	2.22251100818319	0.000206586697231647	Up	1.77907054162243e-05	GO:0048046//apoplast;GO:0005618//cell wall	GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0016762//xyloglucan:xyloglucosyl transferase activity	GO:0010411//xyloglucan metabolic process;GO:0042546//cell wall biogenesis;GO:0071555//cell wall organization	K08235//xyloglucan:xyloglucosyl transferase [EC:2.4.1.207]	gi|350535953|ref|NP_001234478.1|//xyloglucan endotransglucosylase-hydrolase XTH9 precursor [Solanum lycopersicum]
Solyc08g005560.3.1	2049	166.66664842878	622.217436455102	1.90045338791553	4.80538708736607e-12	Up	6.70729348913774e-14	NA	NA	NA	NA	gi|460397755|ref|XP_004244432.1|//PREDICTED: uncharacterized protein LOC101248222 isoform X2 [Solanum lycopersicum];gi|460397753|ref|XP_004244431.1|//PREDICTED: uncharacterized protein LOC101248222 isoform X1 [Solanum lycopersicum]
Solyc03g078710.2.1	3013	83.9823126800928	25.3758258847878	-1.72663074003509	0.00017079846773112	Down	1.43103155619716e-05	NA	NA	NA	K13493//cytokinin-N-glucosyltransferase [EC:2.4.1.-];K13030//cyanohydrin beta-glucosyltransferase [EC:2.4.1.85];K00699//glucuronosyltransferase [EC:2.4.1.17]	gi|723682612|ref|XP_010318076.1|//PREDICTED: 7-deoxyloganetic acid glucosyltransferase-like [Solanum lycopersicum]
Solyc10g083910.2.1	923	161.717787726918	498.500348452938	1.62411614004782	3.89216267590212e-12	Up	5.35941135959435e-14	NA	NA	NA	NA	gi|460408078|ref|XP_004249475.1|//PREDICTED: uncharacterized protein LOC101268528 [Solanum lycopersicum]
Solyc08g065320.3.1	1637	1018.6962037239	420.422542810029	-1.27681194119798	0.000438427618659109	Down	4.26551475490014e-05	GO:0016021//integral component of membrane	NA	NA	K20726	gi|350534758|ref|NP_001233902.1|//green ripe-like 1 [Solanum lycopersicum]
Solyc01g112090.3.1	4662	586.705857896232	1916.09529670459	1.70746001345994	1.4107856254723e-05	Up	8.20569818276969e-07	GO:0016021//integral component of membrane	GO:0015238//drug transmembrane transporter activity;GO:0015297//antiporter activity	GO:0006855//drug transmembrane transport	K00485//dimethylaniline monooxygenase (N-oxide forming) [EC:1.14.13.8]	gi|697134531|ref|XP_009621311.1|//PREDICTED: MATE efflux family protein 3, chloroplastic-like [Nicotiana tomentosiformis];gi|460370487|ref|XP_004231084.1|//PREDICTED: MATE efflux family protein 3, chloroplastic [Solanum lycopersicum]
Solyc03g116510.1.1	282	735.36030504785	217.793160178213	-1.75549265482098	0.000238904718881153	Down	2.11038056065554e-05	NA	NA	NA	NA	gi|723686607|ref|XP_010318785.1|//PREDICTED: uncharacterized protein LOC104646577 [Solanum lycopersicum]
Solyc04g080450.1.1	1554	796.320989712048	388.370965242938	-1.03591473681685	4.22990963769479e-05	Down	2.85017613284852e-06	NA	NA	NA	K15397//3-ketoacyl-CoA synthase [EC:2.3.1.199]	gi|460385157|ref|XP_004238271.1|//PREDICTED: 3-ketoacyl-CoA synthase 4 [Solanum lycopersicum]
Solyc10g076240.2.1	2412	1229.83028458892	493.925129954389	-1.31609496152816	0.0239494295048376	Down	0.00509984089531154	NA	NA	NA	K00430//peroxidase [EC:1.11.1.7]	gi|460407226|ref|XP_004249055.1|//PREDICTED: cationic peroxidase 1 [Solanum lycopersicum]
Solyc11g069330.1.1	1419	1275.68533168665	539.391077190849	-1.24186894775795	0.00127202415260695	Down	0.000149604838536754	NA	NA	NA	NA	gi|723746812|ref|XP_010313600.1|//PREDICTED: uncharacterized protein LOC101255858 [Solanum lycopersicum]
Solyc09g074930.3.1	1329	1478.03771464854	622.418811092084	-1.24772551473557	4.33705279661909e-07	Down	1.62517102536968e-08	NA	NA	GO:0050896//response to stimulus	K17616//CTD small phosphatase-like protein 2 [EC:3.1.3.-];K01228//mannosyl-oligosaccharide glucosidase [EC:3.2.1.106]	gi|460403916|ref|XP_004247432.1|//PREDICTED: stress-related protein [Solanum lycopersicum]
Solyc07g064030.3.1	3112	308.270526896843	131.548309397059	-1.22860425525004	0.0201937888305654	Down	0.00414411195432923	GO:0015630//microtubule cytoskeleton	GO:0032559//adenyl ribonucleotide binding;GO:0003774//motor activity	GO:0007017//microtubule-based process	K10405//kinesin family member C1	gi|697152380|ref|XP_009630428.1|//PREDICTED: kinesin-3-like [Nicotiana tomentosiformis];gi|460397208|ref|XP_004244160.1|//PREDICTED: kinesin-3 [Solanum lycopersicum]
Solyc04g007170.3.1	2137	439.774769997807	146.890143674616	-1.58202724441031	2.66546276949191e-05	Down	1.69875618191095e-06	NA	NA	NA	K09286//EREBP-like factor	gi|460382542|ref|XP_004236998.1|//PREDICTED: ethylene-responsive transcription factor ERF119-like [Solanum lycopersicum]
Solyc07g041720.1.1	636	2666.5541761288	1157.92265572254	-1.20343774872579	0.0169148979956058	Down	0.00333397857783968	GO:0030312//external encapsulating structure;GO:0005576//extracellular region	GO:0016209//antioxidant activity;GO:0046914//transition metal ion binding;GO:0003824//catalytic activity;GO:0004871//signal transducer activity	GO:0008152//metabolic process;GO:0009755//hormone-mediated signaling pathway	K11426//SET and MYND domain-containing protein	gi|460396303|ref|XP_004243715.1|//PREDICTED: auxin-binding protein ABP19a-like [Solanum lycopersicum]
Solyc12g017970.1.1	1866	119.51398465519	44.8271765932868	-1.41473390146169	0.00282068857068827	Down	0.000387022242938303	NA	NA	NA	NA	gi|723749060|ref|XP_010313992.1|//PREDICTED: uncharacterized protein LOC104644870 [Solanum lycopersicum]
Solyc02g078650.3.1	2187	127.860902178898	495.088426852562	1.95311104680997	0.00022188310210852	Up	1.93059247861162e-05	NA	NA	NA	K00422//polyphenol oxidase [EC:1.10.3.1]	gi|723674527|ref|XP_004232833.2|//PREDICTED: polyphenol oxidase, chloroplastic-like [Solanum lycopersicum]
Solyc07g066150.1.1	441	1876.14338344347	4169.45657410287	1.15208927293362	0.00526983008211642	Up	0.0008189398513762	NA	NA	NA	K08905//photosystem I subunit V	gi|460396886|ref|XP_004244001.1|//PREDICTED: photosystem I reaction center subunit V, chloroplastic [Solanum lycopersicum]
Solyc10g009060.1.1	969	597.043630015643	278.742945969215	-1.0989010670087	5.15082612027863e-11	Down	8.70098167044811e-13	NA	GO:0004672//protein kinase activity	NA	K08867//WNK lysine deficient protein kinase [EC:2.7.11.1]	gi|460405292|ref|XP_004248110.1|//PREDICTED: serine/threonine-protein kinase WNK8-like [Solanum lycopersicum]
Solyc07g007590.1.1	1134	1945.74830424597	634.28914285629	-1.61711254694321	7.92713591055148e-14	Down	7.84362958794221e-16	NA	NA	NA	K15227//arogenate dehydrogenase (NADP+), plant [EC:1.3.1.78]	gi|460394284|ref|XP_004242734.1|//PREDICTED: arogenate dehydrogenase 2, chloroplastic-like [Solanum lycopersicum]
Solyc05g009450.2.1	912	14.2782297873155	3.30185122958934	-2.11247010155112	0.0343821985796214	Down	0.00801475178327066	NA	NA	NA	K13434//pathogenesis-related genes transcriptional activator PTI6	gi|460386498|ref|XP_004238935.1|//PREDICTED: ethylene-responsive transcription factor ERF118 [Solanum lycopersicum]
BGI_novel_G000115	1142	13.6398518541087	2.70624354672783	-2.33346439024554	0.0141362013052512	Down	0.00267034863633056	NA	NA	NA	K01303//acylaminoacyl-peptidase [EC:3.4.19.1];K05666//ATP-binding cassette, subfamily C (CFTR/MRP), member 2;K20028//palmitoyltransferase ZDHHC2/15/20 [EC:2.3.1.225];K01191//alpha-mannosidase [EC:3.2.1.24];K13356//alcohol-forming fatty acyl-CoA reductase [EC:1.2.1.84]	gi|47824970|gb|AAT38744.1|//Putative gag-pol polyprotein, identical [Solanum demissum]
Solyc04g080510.3.1	3549	19.5210080364147	70.2240648474912	1.84693795405421	0.000137042076069556	Up	1.10334854322366e-05	NA	NA	NA	K05909//laccase [EC:1.10.3.2];K18422//helicase MOV-10 [EC:3.6.4.13]	gi|723695809|ref|XP_010320396.1|//PREDICTED: cell wall protein DAN4 [Solanum lycopersicum]
Solyc08g083010.3.1	1775	273.41280589931	685.100876310536	1.32523561409411	6.90434036281014e-08	Up	2.18715371914452e-09	NA	NA	NA	NA	gi|460399886|ref|XP_004245467.1|//PREDICTED: uncharacterized protein LOC101267149 [Solanum lycopersicum]
Solyc10g045350.2.1	819	185.768256254401	378.093996250619	1.02524094332568	6.3761090346342e-08	Up	2.00782665989045e-09	NA	NA	NA	NA	gi|460406755|ref|XP_004248825.1|//PREDICTED: uncharacterized protein LOC101253634 [Solanum lycopersicum]
Solyc03g093830.3.1	3142	1226.7164803935	2553.33190691018	1.05757923466706	2.11643719637704e-07	Up	7.42106646735666e-09	NA	NA	NA	NA	gi|460378878|ref|XP_004235195.1|//PREDICTED: uncharacterized protein LOC101244466 [Solanum lycopersicum]
Solyc03g007460.2.1	1047	68.1447722020689	28.8407833398361	-1.24049263349018	0.00987551522787258	Down	0.00173991865357891	NA	NA	NA	K13434//pathogenesis-related genes transcriptional activator PTI6	gi|460376800|ref|XP_004234184.1|//PREDICTED: ethylene-responsive transcription factor CRF4-like [Solanum lycopersicum]
Solyc07g055420.1.1	657	24.9427909343614	7.23558227843043	-1.78544187587491	0.0233397300157316	Down	0.00494981407444241	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|970039470|ref|XP_015081072.1|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase SD2-5 [Solanum pennellii]
Solyc03g033490.2.1	1121	7.20191948117706	36.8548772556299	2.35540217843729	0.00106253117804033	Up	0.00012048415991774	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K12173//BRCA1-A complex subunit BRE	gi|723680468|ref|XP_010317741.1|//PREDICTED: thaumatin-like protein 1b, partial [Solanum lycopersicum]
Solyc12g088400.1.1	291	63.5149169022419	11.8802898493867	-2.41852542351809	0.00238386936807392	Down	0.000315696771091805	NA	NA	NA	NA	gi|723752587|ref|XP_010314653.1|//PREDICTED: zinc finger protein ZAT10-like [Solanum lycopersicum]
Solyc12g099810.2.1	1715	366.813096475529	53.2837230442833	-2.78327835383435	2.13785340622608e-12	Down	2.78290924963967e-14	NA	NA	NA	NA	gi|460415071|ref|XP_004252884.1|//PREDICTED: crt homolog 1 [Solanum lycopersicum]
Solyc07g017960.3.1	656	48.539561487889	1.42671126252879	-5.08839577786847	3.36753912346085e-11	Down	5.43519294192891e-13	NA	NA	NA	K12846//U4/U6.U5 tri-snRNP-associated protein 3	gi|970043043|ref|XP_015082921.1|//PREDICTED: U4/U6.U5 small nuclear ribonucleoprotein 27 kDa protein [Solanum pennellii]
Solyc10g078710.1.1	1511	198.838072935462	405.660126185026	1.02867747535194	4.25502535161111e-05	Up	2.87030114952548e-06	NA	GO:0003677//DNA binding	NA	NA	gi|460407452|ref|XP_004249166.1|//PREDICTED: uncharacterized protein LOC101251341 [Solanum lycopersicum]
Solyc08g083240.3.1	4378	355.530345141423	84.1083481002967	-2.0796517955335	0.0298072577656633	Down	0.00667018695222592	NA	NA	NA	K14411//RNA-binding protein Musashi	gi|460399853|ref|XP_004245451.1|//PREDICTED: protein IQ-DOMAIN 1-like [Solanum lycopersicum]
Solyc08g080620.1.1	681	227.439621717915	520.940052735167	1.19563375906798	0.03260920773925	Up	0.0074787708946	GO:0043231//intracellular membrane-bounded organelle	NA	GO:0006952//defense response;GO:0001906//cell killing	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|806776621|ref|NP_001234161.2|//PR-5x precursor [Solanum lycopersicum]
Solyc05g005930.2.1	1317	389.070221646666	142.35388989587	-1.45054864863846	0.000340817030606094	Down	3.17736870519903e-05	NA	NA	NA	K13080//flavanone 7-O-glucoside 2''-O-beta-L-rhamnosyltransferase [EC:2.4.1.236];K18823//soyasaponin III rhamnosyltransferase [EC:2.4.1.273]	gi|460386018|ref|XP_004238697.1|//PREDICTED: crocetin glucoside glucosyltransferase-like [Solanum lycopersicum]
Solyc06g009040.3.1	1547	109.502322225927	53.1065679307619	-1.04399926368598	0.0414676746827603	Down	0.0101095008255939	NA	GO:0016765//transferase activity, transferring alkyl or aryl (other than methyl) groups	GO:0009755//hormone-mediated signaling pathway	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|976918831|gb|KVI03991.1|//Glutathione S-transferase/chloride channel, C-terminal [Cynara cardunculus var. scolymus];gi|460389800|ref|XP_004240536.1|//PREDICTED: glutathione S-transferase [Solanum lycopersicum]
Solyc01g066760.2.1	544	662.478767304565	170.559833216949	-1.95759628392001	8.23225518836394e-05	Down	6.13237971142235e-06	NA	NA	NA	NA	gi|969999674|ref|XP_015084174.1|//PREDICTED: uncharacterized protein LOC107027547 [Solanum pennellii]
Solyc12g014390.2.1	5948	10.713011235929	26.1179560314714	1.28567794436891	0.0495502299161334	Up	0.0127564446944379	GO:0044424//intracellular part	GO:0016861//intramolecular oxidoreductase activity, interconverting aldoses and ketoses	GO:0006007//glucose catabolic process	K01810//glucose-6-phosphate isomerase [EC:5.3.1.9]	gi|172041789|gb|ACB69785.1|//phosphoglucose isomerase, partial [Poa pratensis]
Solyc11g072580.2.1	1931	30.6719602013567	6.81356509649686	-2.17043860053241	0.0281419255671759	Down	0.00622235126253922	NA	NA	NA	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460412111|ref|XP_004251446.1|//PREDICTED: protein NRT1/ PTR FAMILY 2.7-like [Solanum lycopersicum]
Solyc12g098580.1.1	1398	24.5985775091629	73.0012187898795	1.56934566111403	0.0180901451850884	Up	0.0036248349607141	NA	NA	NA	K13692//UDP-glucose:(indol-3-yl)acetate beta-D-glucosyltransferase [EC:2.4.1.121]	gi|460415638|ref|XP_004253165.1|//PREDICTED: crocetin glucosyltransferase, chloroplastic-like [Solanum lycopersicum]
Solyc10g051070.1.1	480	22.1078023629528	125.462704716546	2.50463104404021	2.85353180386557e-09	Up	6.69903628898464e-11	NA	GO:0003676//nucleic acid binding	NA	NA	gi|970056721|ref|XP_015054988.1|//PREDICTED: NAC domain-containing protein 100-like [Solanum pennellii]
Solyc09g018690.3.1	2768	69.8266845756894	152.393668724551	1.12595258735025	0.000277397143684074	Up	2.49949646020827e-05	NA	NA	NA	K03654//ATP-dependent DNA helicase RecQ [EC:3.6.4.12]	gi|460402586|ref|XP_004246792.1|//PREDICTED: mediator of RNA polymerase II transcription subunit 34-like isoform X1 [Solanum lycopersicum];gi|723726606|ref|XP_010325732.1|//PREDICTED: Werner syndrome ATP-dependent helicase homolog isoform X4 [Solanum lycopersicum];gi|723726600|ref|XP_010325730.1|//PREDICTED: mediator of RNA polymerase II transcription subunit 34-like isoform X2 [Solanum lycopersicum]
Solyc09g008175.1.1	387	11.546718019019	2.77832637257119	-2.05519485642552	0.0386852787850945	Down	0.00928563125089927	NA	NA	NA	K14488//SAUR family protein	gi|460402259|ref|XP_004246631.1|//PREDICTED: auxin-induced protein X10A-like [Solanum lycopersicum]
Solyc09g007020.1.1	483	4.26521216635198	19.6776649413488	2.20586961973644	0.0136215734388123	Up	0.00255519808750633	NA	NA	GO:0006952//defense response;GO:0001906//cell killing	K13449//pathogenesis-related protein 1	gi|460402448|ref|XP_004246724.1|//PREDICTED: pathogenesis-related leaf protein 4 [Solanum lycopersicum]
Solyc03g026040.3.1	3828	32.5824650832123	5.13246607375291	-2.66637166651951	0.00309129032186112	Down	0.000432341456867852	GO:0016020//membrane	GO:0004674//protein serine/threonine kinase activity;GO:0016787//hydrolase activity;GO:0000166//nucleotide binding;GO:0004871//signal transducer activity;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460377322|ref|XP_004234442.1|//PREDICTED: leucine-rich repeat receptor protein kinase EXS [Solanum lycopersicum]
Solyc03g026320.3.1	1434	121.83454642625	534.878376164326	2.1342876099202	5.74101906644901e-06	Up	2.94178629364317e-07	NA	NA	NA	K05657//ATP-binding cassette, subfamily B (MDR/TAP), member 10	gi|590672320|ref|XP_007038578.1|//ATP-dependent Clp protease ATP-binding subunit clpX [Theobroma cacao]
Solyc10g084320.2.1	2211	2841.75162310462	676.845544240097	-2.06988191028135	0.040186689800262	Down	0.0097337061299506	NA	GO:0004175//endopeptidase activity;GO:0005515//protein binding	GO:0044092//negative regulation of molecular function;GO:0019538//protein metabolic process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13199//plasminogen activator inhibitor 1 RNA-binding protein;K12663//Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase [EC:5.3.3.-];K01183//chitinase [EC:3.2.1.14]	gi|460408139|ref|XP_004249504.1|//PREDICTED: subtilisin-like protease [Solanum lycopersicum]
Solyc05g006970.3.1	1160	29.1348093095473	76.3004956595613	1.38894856093315	0.000295663978724073	Up	2.69857341002483e-05	NA	NA	NA	K01728//pectate lyase [EC:4.2.2.2]	gi|460386151|ref|XP_004238763.1|//PREDICTED: uncharacterized protein LOC101255587 [Solanum lycopersicum]
Solyc06g065680.3.1	2293	396.406990902946	83.028168173084	-2.25530963166814	0.0186743094006376	Down	0.00376436981823237	NA	NA	NA	K06627//cyclin A	gi|970037848|ref|XP_015080256.1|//PREDICTED: cyclin-A2-2-like [Solanum pennellii]
Solyc12g019705.1.1	2545	331.138928794986	824.225305506364	1.31560213378772	3.93976156255083e-11	Up	6.47733560133451e-13	NA	NA	NA	NA	gi|971548993|ref|XP_015163823.1|//PREDICTED: uncharacterized protein LOC107060405 [Solanum tuberosum]
Solyc08g007310.3.1	2579	231.245534415584	89.1979297478398	-1.3743433747931	8.35833758063481e-05	Down	6.24516871149012e-06	NA	NA	NA	K18789//xylogalacturonan beta-1,3-xylosyltransferase [EC:2.4.2.41]	gi|460398017|ref|XP_004244561.1|//PREDICTED: probable glycosyltransferase At5g25310 [Solanum lycopersicum]
Solyc08g079200.1.1	408	1377.56964980722	544.577653974004	-1.33891557356196	0.00344724239827594	Down	0.000495216386135673	NA	NA	NA	K02883//large subunit ribosomal protein L18e;K11855//ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12]	gi|460400413|ref|XP_004245729.1|//PREDICTED: 14 kDa proline-rich protein DC2.15-like [Solanum lycopersicum]
Solyc01g107695.1.1	3932	99.6393535885519	254.976775548378	1.35557827858038	0.00107314910151258	Up	0.000121970783885233	GO:0005634//nucleus;GO:0005618//cell wall;GO:0005829//cytosol;GO:0044464//cell part;GO:0005886//plasma membrane	NA	GO:0010051//xylem and phloem pattern formation;GO:0009733//response to auxin;GO:0010265//SCF complex assembly;GO:0016567//protein ubiquitination;GO:0010228//vegetative to reproductive phase transition of meristem	K17263//cullin-associated NEDD8-dissociated protein 1;K03544//ATP-dependent Clp protease ATP-binding subunit ClpX	gi|723665217|ref|XP_010315216.1|//PREDICTED: uncharacterized protein LOC101253534 isoform X2 [Solanum lycopersicum];gi|565365138|ref|XP_006349274.1|//PREDICTED: CLP protease regulatory subunit CLPX2, mitochondrial [Solanum tuberosum];gi|723672590|ref|XP_010316415.1|//PREDICTED: uncharacterized protein LOC104645754 isoform X1 [Solanum lycopersicum];gi|698531906|ref|XP_009762784.1|//PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial [Nicotiana sylvestris];gi|971548682|ref|XP_006346372.2|//PREDICTED: cullin-associated NEDD8-dissociated protein 1-like [Solanum tuberosum];gi|697118350|ref|XP_009613098.1|//PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial [Nicotiana tomentosiformis]
Solyc10g007290.3.1	4053	1055.50084700527	222.605352201349	-2.24536755082152	3.85569903680739e-09	Down	9.2838502014926e-11	GO:0044424//intracellular part	GO:0004611//phosphoenolpyruvate carboxykinase activity	GO:0009060//aerobic respiration;GO:0071704//organic substance metabolic process	K01595//phosphoenolpyruvate carboxylase [EC:4.1.1.31]	gi|747100282|ref|XP_011098224.1|//PREDICTED: phosphoenolpyruvate carboxylase [Sesamum indicum];gi|460405557|ref|XP_004248242.1|//PREDICTED: phosphoenolpyruvate carboxylase [Solanum lycopersicum]
Solyc03g118830.3.1	3479	485.855202085719	1182.30136355101	1.2829994980876	1.48947046505964e-11	Up	2.26390544726898e-13	GO:0016021//integral component of membrane;GO:0005737//cytoplasm	GO:0016627//oxidoreductase activity, acting on the CH-CH group of donors	GO:0055114//oxidation-reduction process;GO:0006629//lipid metabolic process	K07976//Rab family, other;K07904//Ras-related protein Rab-11A	gi|460380074|ref|XP_004235783.1|//PREDICTED: uncharacterized protein LOC101247900 isoform X1 [Solanum lycopersicum]
Solyc10g007390.3.1	1913	6706.98410137318	3091.76568819513	-1.11723319453915	2.22233705730239e-08	Down	6.36267306473708e-10	GO:0044464//cell part	GO:0008320//protein transmembrane transporter activity	GO:0006810//transport	K10956//protein transport protein SEC61 subunit alpha	gi|460405545|ref|XP_004248236.1|//PREDICTED: protein transport protein Sec61 subunit alpha-like [Solanum lycopersicum]
Solyc01g067300.3.1	4279	95.5235856493932	297.880482606529	1.64080470314325	2.65483522321383e-06	Up	1.22953429637932e-07	NA	NA	NA	K19073//divinyl chlorophyllide a 8-vinyl-reductase [EC:1.3.1.75]	gi|723658083|ref|XP_010321210.1|//PREDICTED: divinyl chlorophyllide a 8-vinyl-reductase, chloroplastic [Solanum lycopersicum]
Solyc09g011160.3.1	8773	187.287967242593	78.5573591101469	-1.25343987720772	0.00496166291260279	Down	0.000761982995080684	NA	NA	NA	K08867//WNK lysine deficient protein kinase [EC:2.7.11.1];K10615//E3 ubiquitin-protein ligase HERC4 [EC:2.3.2.26]	gi|930425288|ref|NP_001234845.2|//Prf interactor 30137 [Solanum lycopersicum];gi|723727315|ref|XP_010325838.1|//PREDICTED: ultraviolet-B receptor UVR8 isoform X2 [Solanum lycopersicum];gi|723727312|ref|XP_010325837.1|//PREDICTED: ultraviolet-B receptor UVR8 isoform X1 [Solanum lycopersicum]
Solyc09g090890.2.1	1048	12.7416452197556	39.7366665450444	1.64091927943425	0.00934354693928613	Up	0.00162861749321718	NA	NA	NA	NA	gi|971539231|ref|XP_015160817.1|//PREDICTED: DNA mismatch repair protein MSH1, mitochondrial isoform X3 [Solanum tuberosum];gi|970056759|ref|XP_015055014.1|//PREDICTED: uncharacterized protein LOC107001511 [Solanum pennellii];gi|970052264|ref|XP_015087736.1|//PREDICTED: DNA mismatch repair protein MSH1, mitochondrial isoform X2 [Solanum pennellii]
Solyc04g016230.3.1	1748	2648.97889997399	1206.11919966023	-1.13506385767339	0.0153412691673479	Down	0.00295108763177765	NA	NA	NA	K13495//cis-zeatin O-glucosyltransferase [EC:2.4.1.215]	gi|460381722|ref|XP_004236592.1|//PREDICTED: zeatin O-xylosyltransferase-like [Solanum lycopersicum]
Solyc03g096550.3.1	662	53.0019595033272	8.01154094817023	-2.7258940337556	0.000636465992562962	Down	6.59692930591031e-05	NA	NA	NA	NA	gi|970014781|ref|XP_015068389.1|//PREDICTED: lipoxygenase homology domain-containing protein 1-like [Solanum pennellii];gi|460379019|ref|XP_004235262.1|//PREDICTED: lipoxygenase homology domain-containing protein 1-like [Solanum lycopersicum]
Solyc08g078460.3.1	1542	26.0411726896578	132.735510257066	2.34968805867706	3.95323874530702e-11	Up	6.52923931222641e-13	NA	GO:0016491//oxidoreductase activity	GO:0055114//oxidation-reduction process	K00010//myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]	gi|565377946|ref|XP_006355425.1|//PREDICTED: inositol 2-dehydrogenase/D-chiro-inositol 3-dehydrogenase [Solanum tuberosum];gi|460400518|ref|XP_004245781.1|//PREDICTED: uncharacterized protein LOC101260461 [Solanum lycopersicum]
Solyc08g081110.2.1	744	23.0157846011539	7.92569794508911	-1.53801373327512	0.047756485925349	Down	0.0121726934591512	NA	NA	NA	K10406//kinesin family member C2/C3	gi|970047862|ref|XP_015085470.1|//PREDICTED: kinesin KP1 [Solanum pennellii]
Solyc06g066680.3.1	2212	12.4851134506175	36.5544026435621	1.54983624515911	0.04430393412948	Up	0.0110359799801086	GO:0031224//intrinsic component of membrane;GO:0019866//organelle inner membrane	NA	GO:0006810//transport	K15109//solute carrier family 25 (mitochondrial carnitine/acylcarnitine transporter), member 20/29	gi|460392250|ref|XP_004241730.1|//PREDICTED: mitochondrial arginine transporter BAC2-like [Solanum lycopersicum]
Solyc03g114130.1.1	426	92.6379507473952	240.797005736087	1.37814220777358	2.22264092833477e-07	Up	7.81018294606727e-09	NA	NA	NA	NA	gi|460380758|ref|XP_004236121.1|//PREDICTED: uncharacterized protein LOC101250679 [Solanum lycopersicum]
Solyc07g052430.3.1	976	193.215231834815	71.0605933598106	-1.44308719095617	0.000657845629162899	Down	6.8705021315132e-05	NA	NA	NA	NA	gi|460395790|ref|XP_004243464.1|//PREDICTED: transmembrane protein 97-like [Solanum lycopersicum]
Solyc02g079150.2.1	1715	35.0206516988124	11.572591674209	-1.5974939398892	0.0279474916189348	Down	0.00617200059455032	NA	NA	NA	NA	gi|460376057|ref|XP_004233817.1|//PREDICTED: F-box protein At1g61340 [Solanum lycopersicum]
Solyc03g124110.2.1	867	5136.35379520152	1871.72074472122	-1.4563793745203	4.87467996390429e-05	Down	3.36036472510886e-06	GO:0043231//intracellular membrane-bounded organelle	GO:0001071//nucleic acid binding transcription factor activity;GO:0003676//nucleic acid binding	GO:0006351//transcription, DNA-templated	K09286//EREBP-like factor	gi|460377135|ref|XP_004234350.1|//PREDICTED: dehydration-responsive element-binding protein 1A [Solanum lycopersicum]
Solyc04g077340.3.1	3667	66.3724739429414	198.734624889323	1.58218629574114	5.04510251226323e-07	Up	1.92465536020877e-08	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723694995|ref|XP_004238059.2|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 isoform X2 [Solanum lycopersicum]
Solyc08g077910.3.1	2159	32.4746025386253	149.886467433991	2.20648636126575	0.00978014146795184	Up	0.00171921363276547	NA	NA	NA	K20628;K00030//isocitrate dehydrogenase (NAD+) [EC:1.1.1.41]	gi|460400601|ref|XP_004245822.1|//PREDICTED: expansin-like B1 [Solanum lycopersicum]
Solyc09g007510.2.1	2052	198.409562827897	83.7694106232468	-1.24398613328163	9.55403248827865e-05	Down	7.28953268857378e-06	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723728411|ref|XP_010326006.1|//PREDICTED: LOW QUALITY PROTEIN: L-type lectin-domain containing receptor kinase VIII.1 [Solanum lycopersicum]
Solyc01g105700.3.1	3674	374.02709738853	177.075481339582	-1.07877832984843	3.42587200065027e-05	Down	2.26200352187405e-06	NA	NA	NA	NA	gi|460369524|ref|XP_004230612.1|//PREDICTED: transcription factor bHLH143-like [Solanum lycopersicum]
Solyc02g067050.3.1	1171	8.91082111341352	116.671267240999	3.71074712131146	3.66270279582608e-13	Up	4.21665558887427e-15	NA	NA	NA	K07735//putative transcriptional regulator	gi|460375168|ref|XP_004233379.1|//PREDICTED: uncharacterized protein LOC101247689 [Solanum lycopersicum]
Solyc01g091140.3.1	960	19.3537594584003	6.64691755772834	-1.54185647115206	0.0387397694274309	Down	0.00930016812326699	NA	NA	NA	NA	gi|969995615|ref|XP_015072120.1|//PREDICTED: uncharacterized protein LOC107016116 [Solanum pennellii]
Solyc06g007120.3.1	2489	961.004885666205	376.384711675993	-1.3523357369499	0.00312846105209019	Down	0.000439020305654492	NA	GO:0046872//metal ion binding;GO:0060089//molecular transducer activity;GO:0004629//phospholipase C activity	GO:0007165//signal transduction;GO:0044238//primary metabolic process	K05857//phosphatidylinositol phospholipase C, delta [EC:3.1.4.11]	gi|350535190|ref|NP_001234181.1|//PI-phospholipase C PLC4 [Solanum lycopersicum]
Solyc11g006020.2.1	796	1245.97171135409	2856.36163200875	1.1969073308553	1.49428695811422e-10	Up	2.78843615961119e-12	GO:0016020//membrane	GO:0016651//oxidoreductase activity, acting on NAD(P)H	GO:0008152//metabolic process	K17065//dynamin 1-like protein [EC:3.6.5.5]	gi|970063562|ref|XP_015058716.1|//PREDICTED: NAD(P)H-quinone oxidoreductase subunit O, chloroplastic isoform X1 [Solanum pennellii]
Solyc06g052070.3.1	3618	1394.79696714133	479.97419246513	-1.53902639086625	4.36874663302097e-11	Down	7.29768060594925e-13	NA	NA	NA	K20241//WD repeat-containing protein 44	gi|460390696|ref|XP_004240961.1|//PREDICTED: WD repeat-containing protein 44 [Solanum lycopersicum]
Solyc03g097050.3.1	3219	691.310568501068	2573.63107071789	1.89639937214028	2.35782357883727e-19	Up	1.19428284314836e-21	GO:0031224//intrinsic component of membrane;GO:0016021//integral component of membrane	GO:0016760//cellulose synthase (UDP-forming) activity;GO:0016759//cellulose synthase activity	GO:0030244//cellulose biosynthetic process;GO:0045229//external encapsulating structure organization;GO:0071555//cell wall organization;GO:0009250//glucan biosynthetic process	K20924;K00770//1,4-beta-D-xylan synthase [EC:2.4.2.24]	gi|460379057|ref|XP_004235281.1|//PREDICTED: cellulose synthase-like protein D3 [Solanum lycopersicum];gi|703065524|ref|XP_010087475.1|//Cellulose synthase-like protein D3 [Morus notabilis]
Solyc12g005060.1.1	1050	54.6806455044442	126.686117210957	1.21215625749013	0.0165892908534427	Up	0.00325232485467607	NA	NA	NA	K02115//F-type H+-transporting ATPase subunit gamma	gi|460412146|ref|XP_004251463.1|//PREDICTED: ATP synthase gamma chain, chloroplastic-like [Solanum lycopersicum]
Solyc08g062690.2.1	938	1773.87844600873	746.092751933034	-1.24948025507764	3.18512693307728e-05	Down	2.08507180720634e-06	NA	GO:0016787//hydrolase activity	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|970043912|ref|XP_015083366.1|//PREDICTED: uncharacterized protein LOC107026794 [Solanum pennellii]
Solyc03g006490.3.1	1188	1054.94309912755	247.833475723359	-2.08972221027846	0.0321842112185758	Down	0.00735345051656927	NA	NA	NA	K13783//MFS transporter, OPA family, solute carrier family 37 (glycerol-3-phosphate transporter), member 1/2	gi|807066298|ref|NP_001234039.2|//expressed predominantly in leaves [Solanum lycopersicum];gi|970013053|ref|XP_015067481.1|//PREDICTED: stem-specific protein TSJT1-like [Solanum pennellii]
Solyc05g008960.3.1	3378	376.999618208579	1085.01476235641	1.52507970406563	1.90558189778041e-07	Up	6.60286278350547e-09	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460386432|ref|XP_004238902.1|//PREDICTED: probable serine/threonine-protein kinase At1g18390 isoform X1 [Solanum lycopersicum];gi|723697836|ref|XP_010320749.1|//PREDICTED: probable serine/threonine-protein kinase At1g18390 isoform X2 [Solanum lycopersicum]
Solyc01g080010.2.1	1537	1045.44811939861	475.396633403585	-1.13691787787724	0.000802661270968957	Down	8.65472988185489e-05	NA	GO:0004175//endopeptidase activity	GO:0019538//protein metabolic process	K00924;K02882//large subunit ribosomal protein L18Ae	gi|928197639|ref|NP_001234249.2|//xyloglucan-specific fungal endoglucanase inhibitor protein precursor [Solanum lycopersicum]
Solyc01g011080.3.1	540	50.1820301534285	23.2598174353749	-1.10933106404177	0.0223086170189061	Down	0.00468637722713585	NA	NA	NA	NA	NA
Solyc01g104720.3.1	477	433.906010266326	1207.2409002838	1.47625911411955	9.7697309622875e-08	Up	3.19041628113828e-09	NA	NA	NA	NA	gi|969999589|ref|XP_015083809.1|//PREDICTED: uncharacterized protein LOC107027143 [Solanum pennellii]
Solyc04g078340.3.1	1989	1112.61334544538	242.94071686724	-2.19527610442054	7.24017559335367e-05	Down	5.28385902847621e-06	NA	NA	NA	K00517;K07408//cytochrome P450, family 1, subfamily A, polypeptide 1 [EC:1.14.14.1]	gi|970021025|ref|XP_015071767.1|//PREDICTED: cytochrome P450 81F1-like [Solanum pennellii]
Solyc04g076527.1.1	4705	254.073225921633	684.909403280209	1.43066881441898	0.000127947897199505	Up	1.02050241558672e-05	NA	NA	NA	K17604//zinc finger SWIM domain-containing protein 3	gi|460384630|ref|XP_004238013.1|//PREDICTED: GATA transcription factor 24-like isoform X2 [Solanum lycopersicum]
Solyc01g108670.3.1	9865	143.386345009149	45.8205225460726	-1.64584182300006	0.0412571973612836	Down	0.0100416481299984	NA	NA	NA	K10400//kinesin family member 15	gi|723665609|ref|XP_010315271.1|//PREDICTED: phragmoplast orienting kinesin 2 isoform X2 [Solanum lycopersicum]
Solyc04g007600.3.1	1932	79.660384396271	221.282288083301	1.47395363283679	6.50577588346554e-05	Up	4.68964130651617e-06	GO:0016021//integral component of membrane	GO:0008270//zinc ion binding	NA	K10661//E3 ubiquitin-protein ligase MARCH6 [EC:2.3.2.27]	gi|460382526|ref|XP_004236990.1|//PREDICTED: uncharacterized protein LOC101256764 [Solanum lycopersicum]
Solyc04g016010.3.1	3400	296.422881208181	124.825169769377	-1.24774794634166	2.8374909896725e-06	Down	1.3301406219458e-07	NA	NA	NA	K00384//thioredoxin reductase (NADPH) [EC:1.8.1.9]	gi|723688847|ref|XP_010319181.1|//PREDICTED: LOW QUALITY PROTEIN: thioredoxin reductase NTRC [Solanum lycopersicum];gi|970020475|ref|XP_015071469.1|//PREDICTED: thioredoxin reductase NTRC isoform X1 [Solanum pennellii]
Solyc00g244300.1.1	258	96.8708760874975	272.500215942752	1.49212247876406	4.79628465805637e-07	Up	1.82251599121028e-08	NA	NA	NA	NA	gi|570699896|ref|YP_008992291.1|//hypothetical protein Salmi_Mp025 (mitochondrion) [Salvia miltiorrhiza]
Solyc01g099960.3.1	2126	19.1206035498228	3.634650828655	-2.39523938331141	0.0150973867219541	Down	0.00289622177935455	GO:0030312//external encapsulating structure	GO:0030234//enzyme regulator activity	GO:0071555//cell wall organization	K01051//pectinesterase [EC:3.1.1.11]	gi|460368819|ref|XP_004230262.1|//PREDICTED: putative pectinesterase/pectinesterase inhibitor 22 [Solanum lycopersicum]
Solyc11g068530.1.1	978	79.2284651684134	194.560756136749	1.2961299813663	0.000350990297878133	Up	3.28937860050575e-05	NA	NA	NA	K13161//heterogeneous nuclear ribonucleoprotein R;K20642	gi|970060032|ref|XP_015056771.1|//PREDICTED: putative uncharacterized protein DDB_G0277255 [Solanum pennellii]
Solyc07g049370.2.1	1645	964.501079720729	447.462946084553	-1.10801463398496	0.0188147113350273	Down	0.00380258198990846	NA	GO:0043167//ion binding;GO:0016798//hydrolase activity, acting on glycosyl bonds	GO:0044238//primary metabolic process	K19891//glucan endo-1,3-beta-glucosidase 1/2/3 [EC:3.2.1.39]	gi|460395895|ref|XP_004243515.1|//PREDICTED: glucan endo-1,3-beta-glucosidase 12 [Solanum lycopersicum]
Solyc01g098390.3.1	2238	545.366050835213	1570.40239590917	1.52583747893307	1.55272715110803e-13	Up	1.60062919263958e-15	NA	GO:0003824//catalytic activity;GO:0004871//signal transducer activity	NA	K14493//gibberellin receptor GID1 [EC:3.-.-.-]	gi|460368601|ref|XP_004230154.1|//PREDICTED: gibberellin receptor GID1C [Solanum lycopersicum]
Solyc09g089910.1.1	432	846.974503107474	92.0081878493946	-3.20248438198257	4.37013349347372e-14	Down	4.15968312207995e-16	NA	NA	GO:0006351//transcription, DNA-templated	K14516//ethylene-responsive transcription factor 1	gi|460404916|ref|XP_004247924.1|//PREDICTED: ethylene-responsive transcription factor ERF096 [Solanum lycopersicum]
Solyc06g072530.3.1	765	26.2832585138523	7.36890512339793	-1.83462196362847	0.0129941066071273	Down	0.00241256268270028	NA	NA	NA	K11000//callose synthase [EC:2.4.1.-]	gi|460391704|ref|XP_004241459.1|//PREDICTED: CASP-like protein 1F1 [Solanum lycopersicum]
Solyc01g086650.3.1	2131	3321.33898385089	1008.65653090288	-1.71932998569687	1.21596346009136e-11	Down	1.82531760939222e-13	NA	NA	NA	NA	gi|460367465|ref|XP_004229594.1|//PREDICTED: uroporphyrinogen-III C-methyltransferase [Solanum lycopersicum]
Solyc01g068170.3.1	1560	278.196987125603	131.333221113397	-1.08287489934678	0.00016154631787939	Down	1.33865923689299e-05	NA	NA	NA	K16251//DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6];K11292//transcription elongation factor SPT6	gi|723657847|ref|XP_010320843.1|//PREDICTED: uncharacterized protein LOC104647318 [Solanum lycopersicum]
Solyc01g094060.3.1	6259	830.993327728006	399.551101660487	-1.05645686094212	1.25013569236257e-05	Down	7.1254912487934e-07	NA	NA	NA	K18953//factor associated with neutral sphingomyelinase activation	gi|723660897|ref|XP_010326114.1|//PREDICTED: uncharacterized protein LOC101244711 [Solanum lycopersicum];gi|698577304|ref|XP_009776439.1|//PREDICTED: uncharacterized protein LOC104226212 [Nicotiana sylvestris]
Solyc04g051490.3.1	3158	19.200383543962	48.5461223568708	1.33822093404547	0.0187704632334932	Up	0.00378869583324646	NA	NA	NA	K10882//crossover junction endonuclease EME1 [EC:3.1.22.-]	gi|460383539|ref|XP_004237479.1|//PREDICTED: crossover junction endonuclease EME1B [Solanum lycopersicum]
Solyc02g092930.1.1	1086	7967.09777333868	1807.25672622936	-2.14025282007235	1.09914998705007e-25	Down	2.39844617189256e-28	NA	NA	NA	K09422//myb proto-oncogene protein, plant	gi|723669374|ref|XP_010315996.1|//PREDICTED: transcription factor MYB44-like [Solanum lycopersicum]
Solyc01g099410.3.1	519	3204.58646894124	832.947448631024	-1.94384081572831	0.048465648568761	Down	0.0123972138682846	GO:0043231//intracellular membrane-bounded organelle;GO:0000785//chromatin	GO:0003676//nucleic acid binding	GO:0034728//nucleosome organization	K11251//histone H2A	gi|823683761|ref|NP_001296309.1|//histone H2A.1 [Solanum lycopersicum]
Solyc08g083300.3.1	3236	1611.38519159931	617.224987337787	-1.38443302920122	2.12849172810862e-07	Down	7.47134229618261e-09	NA	NA	NA	K11835//ubiquitin carboxyl-terminal hydrolase 4/11/15 [EC:3.4.19.12]	gi|460399839|ref|XP_004245444.1|//PREDICTED: ubiquitin carboxyl-terminal hydrolase 9 isoform X1 [Solanum lycopersicum]
Solyc03g119530.3.1	2864	1529.85317287182	448.954132968283	-1.76875323155626	5.08352983211604e-05	Down	3.52481018833328e-06	NA	NA	NA	NA	gi|460380138|ref|XP_004235815.1|//PREDICTED: LOB domain-containing protein 40-like [Solanum lycopersicum]
Solyc02g089250.3.1	3231	104.387058084204	29.0095606244368	-1.84734250763223	0.0156810805905385	Down	0.00303002369875868	NA	NA	NA	K15889//prenylcysteine alpha-carboxyl methylesterase [EC:3.1.1.-];K02184//formin 2	gi|970011322|ref|XP_015066570.1|//PREDICTED: formin-2 [Solanum pennellii];gi|460372634|ref|XP_004232133.1|//PREDICTED: formin-2 [Solanum lycopersicum]
Solyc03g118010.3.1	3567	3022.64913786291	1472.06264544683	-1.0379744555996	3.1186607870899e-07	Down	1.13459179124001e-08	GO:0031332//RNAi effector complex;GO:0016442//RISC complex	GO:0016787//hydrolase activity;GO:0003712//transcription cofactor activity;GO:0005488//binding	GO:0035194//posttranscriptional gene silencing by RNA;GO:1903506//regulation of nucleic acid-templated transcription;GO:0016458//gene silencing	K15979//staphylococcal nuclease domain-containing protein 1	gi|460380233|ref|XP_004235862.1|//PREDICTED: staphylococcal nuclease domain-containing protein 1-like [Solanum lycopersicum]
Solyc02g085400.3.1	1864	704.364376636587	248.645058391705	-1.5022341873427	0.000124661311492533	Down	9.87253802452155e-06	NA	NA	NA	K11996//adenylyltransferase and sulfurtransferase [EC:2.7.7.80]	gi|460373169|ref|XP_004232395.1|//PREDICTED: uncharacterized protein LOC101255155 [Solanum lycopersicum]
Solyc02g088167.1.1	3207	100.150662167138	47.2105096642424	-1.08499199701316	0.0469974371669829	Down	0.0119120291269362	NA	NA	NA	K15271//ATP-dependent DNA helicase HFM1/MER3 [EC:3.6.4.12];K01074//palmitoyl-protein thioesterase [EC:3.1.2.22];K19090//CRISPR-associated protein Cas5t;K19589//release factor glutamine methyltransferase [EC:2.1.1.297]	gi|723671394|ref|XP_010316250.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g15300 [Solanum lycopersicum]
Solyc02g032360.3.1	1428	868.88695451697	2135.70953942387	1.29747505681229	0.000307842339697062	Up	2.82575295805862e-05	NA	NA	NA	NA	NA
Solyc01g109890.3.1	2524	2281.54511294768	5046.44526501294	1.14525632536897	6.15384091206285e-05	Up	4.40122331596368e-06	NA	GO:0005515//protein binding	GO:0044267//cellular protein metabolic process	K09517//DnaJ homolog subfamily B member 11;K09503//DnaJ homolog subfamily A member 2	gi|460370100|ref|XP_004230892.1|//PREDICTED: chaperone protein dnaJ 10 [Solanum lycopersicum]
BGI_novel_G000536	749	111.059830541421	27.481547368129	-2.01480195620544	2.63665493415101e-08	Down	7.62824546411635e-10	NA	GO:0003964//RNA-directed DNA polymerase activity;GO:0008270//zinc ion binding;GO:0004519//endonuclease activity;GO:0004190//aspartic-type endopeptidase activity;GO:0003676//nucleic acid binding	GO:0015074//DNA integration;GO:0006508//proteolysis;GO:0090305//nucleic acid phosphodiester bond hydrolysis;GO:0006278//RNA-dependent DNA replication	K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6];K09422//myb proto-oncogene protein, plant;K01188//beta-glucosidase [EC:3.2.1.21];K05658//ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:3.6.3.44]	gi|130582|sp|P10978.1|POLX_TOBAC//RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Includes: RecName: Full=Protease; Includes: RecName: Full=Reverse transcriptase; Includes: RecName: Full=Endonuclease
Solyc02g091860.3.1	4024	899.49144481013	421.812842244412	-1.09250654069409	1.0396714457991e-07	Down	3.40689928250946e-09	NA	GO:0004672//protein kinase activity	NA	K00924;K08286//protein-serine/threonine kinase [EC:2.7.11.-]	gi|460372285|ref|XP_004231961.1|//PREDICTED: LRR receptor-like serine/threonine-protein kinase HSL2 [Solanum lycopersicum]
Solyc08g007805.1.1	506	5441.00371249599	12356.2365598736	1.18329467881914	0.000518870892372864	Up	5.20823002577427e-05	NA	NA	NA	K03952//NADH dehydrogenase (ubiquinone) 1 alpha subcomplex subunit 8	gi|976903651|gb|KVH91458.1|//CHCH-like protein [Cynara cardunculus var. scolymus];gi|698479774|ref|XP_009786960.1|//PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B-like [Nicotiana sylvestris];gi|225432428|ref|XP_002278102.1|//PREDICTED: NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 8-B [Vitis vinifera]
Solyc08g005090.1.1	825	118.984251136884	239.156339164496	1.00718340267903	4.66552859286408e-05	Up	3.19460573326284e-06	NA	NA	NA	NA	gi|723719218|ref|XP_010324466.1|//PREDICTED: uncharacterized protein LOC101261936 [Solanum lycopersicum]
Solyc03g114500.3.1	7474	3178.53805314115	1094.80580426023	-1.53768837185844	4.32864590579559e-09	Down	1.06343332448628e-10	GO:0044424//intracellular part;GO:0043234//protein complex	GO:0046872//metal ion binding;GO:0016836//hydro-lyase activity	GO:0006007//glucose catabolic process	K01689//enolase [EC:4.2.1.11]	gi|460380701|ref|XP_004236093.1|//PREDICTED: enolase 1, chloroplastic [Solanum lycopersicum]
Solyc06g061090.3.1	1049	42.3270046446755	208.382629023685	2.2995847160081	1.25818720368588e-09	Up	2.77388149495834e-11	NA	NA	NA	NA	gi|460392737|ref|XP_004241970.1|//PREDICTED: uncharacterized protein LOC101244088 [Solanum lycopersicum]
Solyc04g072510.3.1	1633	106.549908008998	37.8235281482382	-1.49417349944651	0.000838686958562913	Down	9.0983689557073e-05	NA	NA	NA	K15032//mTERF domain-containing protein, mitochondrial	gi|970022902|ref|XP_015072784.1|//PREDICTED: uncharacterized protein LOC107017007 [Solanum pennellii]
Solyc01g102650.2.1	3061	320.464504820393	668.745512707713	1.06129273552906	0.000152976168292033	Up	1.25350675146745e-05	NA	NA	NA	K14297//nuclear pore complex protein Nup98-Nup96	gi|971537254|ref|XP_015168642.1|//PREDICTED: nuclear pore complex protein NUP98A-like isoform X1 [Solanum tuberosum];gi|971553928|ref|XP_015165055.1|//PREDICTED: nuclear pore complex protein NUP98B-like isoform X1 [Solanum tuberosum];gi|970005159|ref|XP_015063413.1|//PREDICTED: nuclear pore complex protein NUP98A-like isoform X4 [Solanum pennellii]
Solyc09g014910.3.1	760	275.239984443238	87.0114225837977	-1.66141335636733	0.0158506411818671	Down	0.00306875092256915	NA	NA	NA	NA	gi|723726914|ref|XP_010325781.1|//PREDICTED: protein LURP-one-related 10-like [Solanum lycopersicum]
Solyc04g072000.3.1	945	7930.96911380268	2489.84277418596	-1.67144252135357	1.74998698683879e-13	Down	1.83689378979692e-15	NA	NA	NA	K01183//chitinase [EC:3.2.1.14]	gi|460384265|ref|XP_004237833.1|//PREDICTED: chitinase 6 [Solanum lycopersicum]
Solyc06g083440.3.1	911	961.016103274448	431.922239166678	-1.15378900460972	1.59252354786668e-06	Down	6.92609940306203e-08	GO:0031224//intrinsic component of membrane;GO:0043231//intracellular membrane-bounded organelle;GO:0031090//organelle membrane;GO:0016021//integral component of membrane;GO:0005789//endoplasmic reticulum membrane	GO:0020037//heme binding;GO:0046872//metal ion binding;GO:0005506//iron ion binding	GO:0006091//generation of precursor metabolites and energy;GO:0055114//oxidation-reduction process;GO:0051234//establishment of localization	K10534//nitrate reductase (NAD(P)H) [EC:1.7.1.1 1.7.1.2 1.7.1.3]	gi|460393616|ref|XP_004242405.1|//PREDICTED: cytochrome b5-like [Solanum lycopersicum]
Solyc04g081235.1.1	4451	307.303118827206	102.335398057412	-1.58635714589921	0.0237994858027144	Down	0.00506343462055493	GO:0043231//intracellular membrane-bounded organelle	GO:0005515//protein binding;GO:0003676//nucleic acid binding	GO:0006351//transcription, DNA-templated;GO:0009755//hormone-mediated signaling pathway	K14486//auxin response factor	gi|350539842|ref|NP_001234545.1|//auxin response factor 5 [Solanum lycopersicum]
Solyc05g005980.3.1	2347	135.202574776375	42.6893480281072	-1.66317459199095	0.0327705254180318	Down	0.00752809737405953	NA	NA	NA	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|992319496|ref|NP_001307048.1|//NRT1/ PTR FAMILY 1.2 [Solanum lycopersicum]
Solyc07g047640.2.1	1076	101.239863466996	32.274412243661	-1.6493147392796	3.34380437562959e-05	Down	2.19649452214043e-06	NA	NA	NA	K11649//SWI/SNF related-matrix-associated actin-dependent regulator of chromatin subfamily C;K15030//translation initiation factor 3 subunit M	gi|723716135|ref|XP_010323888.1|//PREDICTED: F-box protein At3g07870-like [Solanum lycopersicum]
Solyc04g072240.3.1	2146	495.803792075284	1002.12494040626	1.01522117764127	3.06533349550267e-08	Up	9.01840027646007e-10	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K14572//midasin;K00010//myo-inositol 2-dehydrogenase / D-chiro-inositol 1-dehydrogenase [EC:1.1.1.18 1.1.1.369]	gi|697102062|ref|XP_009599106.1|//PREDICTED: uncharacterized oxidoreductase At4g09670-like [Nicotiana tomentosiformis];gi|460384299|ref|XP_004237850.1|//PREDICTED: uncharacterized oxidoreductase At4g09670 [Solanum lycopersicum]
Solyc01g087260.3.1	2188	627.362715361322	1411.29942809822	1.1696524131644	1.64811737965584e-10	Up	3.11889782530807e-12	NA	GO:0016702//oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen;GO:0016701//oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	GO:0055114//oxidation-reduction process	K11159//carotenoid cleavage dioxygenase	gi|350538577|ref|NP_001233838.1|//carotenoid cleavage dioxygenase 1-2 [Solanum lycopersicum];gi|723659645|ref|XP_010324092.1|//PREDICTED: carotenoid cleavage dioxygenase 1-2 isoform X1 [Solanum lycopersicum]
Solyc09g008750.1.1	609	111.746009966707	32.129217027139	-1.79826559047069	0.000127637270561098	Down	1.01562387974689e-05	NA	NA	NA	NA	gi|970051513|ref|XP_015087352.1|//PREDICTED: VQ motif-containing protein 29-like [Solanum pennellii]
Solyc05g014130.3.1	4112	1435.07879347122	713.472483134817	-1.00820025600448	1.30800907435251e-07	Down	4.40431949415159e-09	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial;K06133//4'-phosphopantetheinyl transferase [EC:2.7.8.-];K10592//E3 ubiquitin-protein ligase HUWE1 [EC:2.3.2.26]	gi|460387663|ref|XP_004239494.1|//PREDICTED: uncharacterized protein LOC101251779 [Solanum lycopersicum]
Solyc08g080000.3.1	3054	191.389847193119	400.862472028421	1.06659306140106	1.1968265321113e-07	Up	3.98491904032545e-09	NA	NA	NA	K13414//mitogen-activated protein kinase kinase kinase 1, plant [EC:2.7.11.25];K11324//DNA methyltransferase 1-associated protein 1	gi|460400296|ref|XP_004245671.1|//PREDICTED: uncharacterized protein LOC101252512 isoform X1 [Solanum lycopersicum];gi|723724623|ref|XP_010325439.1|//PREDICTED: uncharacterized protein LOC101252512 isoform X2 [Solanum lycopersicum]
Solyc09g091650.3.1	3412	76.1857770393189	21.8104886045109	-1.80449959919907	0.0247185084645774	Down	0.00529336908127819	NA	NA	NA	K11269//chromosome transmission fidelity protein 18	gi|460404743|ref|XP_004247840.1|//PREDICTED: chromosome transmission fidelity protein 18 homolog isoform X1 [Solanum lycopersicum]
Solyc01g057910.3.1	1397	149.838246066231	45.8904408135893	-1.70714034716061	0.000142671278346197	Down	1.15350104276139e-05	NA	NA	NA	K09422//myb proto-oncogene protein, plant	gi|460366312|ref|XP_004229031.1|//PREDICTED: transcription factor MYB108-like [Solanum lycopersicum]
Solyc03g123560.3.1	2984	1819.85454482761	480.342774946829	-1.9216869523447	1.92903728393186e-21	Down	6.96717754918957e-24	NA	NA	NA	K09510//DnaJ homolog subfamily B member 4;K09512//DnaJ homolog subfamily B member 6	gi|970020109|ref|XP_015071272.1|//PREDICTED: dnaJ homolog subfamily B member 6 isoform X1 [Solanum pennellii];gi|723684692|ref|XP_010318459.1|//PREDICTED: dnaJ homolog subfamily B member 6 [Solanum lycopersicum]
Solyc09g008860.3.1	2358	81.7953826321815	14.8074717522107	-2.46569407105722	0.00903420735848188	Down	0.00156450174834808	NA	GO:0016740//transferase activity	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|971539783|ref|XP_006341184.2|//PREDICTED: leucine-rich repeat receptor-like protein kinase PXC1 [Solanum tuberosum]
Solyc11g071470.1.1	1332	54.5428854423927	14.1851183165545	-1.94301284008558	0.0265513013540375	Down	0.0057947366122939	NA	NA	NA	K13065//shikimate O-hydroxycinnamoyltransferase [EC:2.3.1.133]	gi|460411605|ref|XP_004251197.1|//PREDICTED: agmatine coumaroyltransferase-2-like [Solanum lycopersicum]
Solyc05g053790.1.1	1302	81.5019106737811	29.7307893521999	-1.45487611397861	0.0175481298402399	Down	0.00349114035346835	NA	NA	NA	K08679//UDP-glucuronate 4-epimerase [EC:5.1.3.6]	gi|460388394|ref|XP_004239852.1|//PREDICTED: UDP-glucuronate 4-epimerase 6-like [Solanum lycopersicum]
Solyc05g054940.3.1	1224	464.553314607489	936.450307460819	1.01135826272927	1.05686615775376e-08	Up	2.83500967072397e-10	NA	NA	NA	K13566//omega-amidase [EC:3.5.1.3]	gi|460388192|ref|XP_004239753.1|//PREDICTED: nitrilase-like protein 2 [Solanum lycopersicum]
Solyc01g079470.3.1	375	664.691839641633	4022.02459720059	2.59716435736696	3.36970505303578e-14	Up	3.14404384180916e-16	NA	NA	NA	NA	gi|460367060|ref|XP_004229393.1|//PREDICTED: calvin cycle protein CP12-1, chloroplastic [Solanum lycopersicum]
Solyc09g098110.3.1	1616	1108.59781331217	406.938630520794	-1.44585292056603	3.27534335002783e-13	Down	3.70750121688232e-15	NA	NA	NA	K16189//phytochrome-interacting factor 4;K11253//histone H3;K12126//phytochrome-interacting factor 3	gi|723733408|ref|XP_010326935.1|//PREDICTED: transcription factor bHLH128 isoform X2 [Solanum lycopersicum];gi|723733405|ref|XP_010326934.1|//PREDICTED: transcription factor bHLH128 isoform X1 [Solanum lycopersicum]
Solyc06g069580.3.1	3300	222.993524023538	77.6498958887878	-1.52194591791411	5.69690517360177e-06	Down	2.91703835262303e-07	GO:0044464//cell part	GO:0016787//hydrolase activity	NA	K07964//heparanase 1 [EC:3.2.1.166]	gi|460391971|ref|XP_004241591.1|//PREDICTED: heparanase-like protein 2 [Solanum lycopersicum]
Solyc02g084410.3.1	1456	3773.48149456369	1316.07006330268	-1.51965990361704	0.000150456402135382	Down	1.22889709945791e-05	NA	NA	NA	K14611//solute carrier family 23 (nucleobase transporter), member 1/2	gi|460373312|ref|XP_004232464.1|//PREDICTED: lactoylglutathione lyase-like [Solanum lycopersicum]
Solyc01g006545.1.1	1909	485.228100840472	1723.31750005481	1.82845351659951	1.07663300406267e-13	Up	1.08149364967921e-15	NA	NA	NA	K19613//leucine-rich repeat protein SHOC2;K10406//kinesin family member C2/C3;K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|723655773|ref|XP_010315920.1|//PREDICTED: receptor-like protein 12 isoform X3 [Solanum lycopersicum];gi|460365467|ref|XP_004228623.1|//PREDICTED: receptor-like protein 12 isoform X2 [Solanum lycopersicum]
Solyc11g010780.1.1	1107	449.647510083987	87.0187132371854	-2.3693968910896	1.03183211839565e-18	Down	5.62888100704927e-21	NA	GO:0016758//transferase activity, transferring hexosyl groups	NA	K18823//soyasaponin III rhamnosyltransferase [EC:2.4.1.273]	gi|460409463|ref|XP_004250158.1|//PREDICTED: UDP-glycosyltransferase 91A1-like [Solanum lycopersicum]
Solyc05g006440.3.1	1007	664.030790024458	1664.1067286156	1.32542592102161	8.61948482238835e-11	Up	1.51116626306733e-12	NA	NA	NA	NA	gi|460386078|ref|XP_004238727.1|//PREDICTED: uncharacterized protein LOC101244581 [Solanum lycopersicum]
Solyc02g023990.3.1	1591	52.6685130535283	116.025213374052	1.13942571590632	0.00471577435048669	Up	0.000718188659547409	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K08081//tropinone reductase I [EC:1.1.1.206];K00059//3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100];K09841//xanthoxin dehydrogenase [EC:1.1.1.288]	gi|460371478|ref|XP_004231563.1|//PREDICTED: uncharacterized oxidoreductase C24B10.20 [Solanum lycopersicum]
Solyc06g060910.2.1	2450	14.0856050362154	34.1920355259152	1.27943877719989	0.0221694671872258	Up	0.00465158459379828	NA	NA	NA	K13783//MFS transporter, OPA family, solute carrier family 37 (glycerol-3-phosphate transporter), member 1/2	gi|460393364|ref|XP_004242279.1|//PREDICTED: putative glycerol-3-phosphate transporter 4 [Solanum lycopersicum]
Solyc02g090310.1.1	783	239.586839428326	54.4533747797837	-2.13745529396818	5.20103112457666e-11	Down	8.80535743438487e-13	NA	NA	NA	K16222//Dof zinc finger protein DOF5.5	gi|460372489|ref|XP_004232062.1|//PREDICTED: dof zinc finger protein DOF1.7-like [Solanum lycopersicum]
Solyc02g089560.3.1	1956	518.772379081829	257.557528752377	-1.01020695585307	7.36648332057403e-08	Down	2.35017978022828e-09	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial	gi|460372601|ref|XP_004232117.1|//PREDICTED: pentatricopeptide repeat-containing protein At3g02490, mitochondrial-like [Solanum lycopersicum]
Solyc11g011120.2.1	2482	655.641291223068	310.576113878128	-1.0779598382382	1.13588313588363e-06	Down	4.76917072854073e-08	NA	NA	NA	K13806//sn1-specific diacylglycerol lipase [EC:3.1.1.-]	gi|460409502|ref|XP_004250177.1|//PREDICTED: uncharacterized protein LOC101256054 [Solanum lycopersicum]
Solyc01g108210.3.1	6818	1239.6803694909	4168.16107651856	1.74944283676178	7.29978249197819e-12	Up	1.05184977216992e-13	GO:0016021//integral component of membrane	GO:0016705//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen;GO:0020037//heme binding;GO:0005506//iron ion binding;GO:0004497//monooxygenase activity	GO:0055114//oxidation-reduction process	K09843//(+)-abscisic acid 8'-hydroxylase [EC:1.14.13.93]	gi|460369885|ref|XP_004230787.1|//PREDICTED: abscisic acid 8'-hydroxylase 4 isoform X1 [Solanum lycopersicum];gi|460369887|ref|XP_004230788.1|//PREDICTED: abscisic acid 8'-hydroxylase 4 isoform X2 [Solanum lycopersicum];gi|723665429|ref|XP_010315238.1|//PREDICTED: abscisic acid 8'-hydroxylase 4 isoform X3 [Solanum lycopersicum]
Solyc02g064800.3.1	5568	236.473212171491	106.193170315495	-1.15498577950388	0.00300713453924852	Down	0.000418260962814213	NA	NA	NA	K14963//COMPASS component SWD3;K10752//histone-binding protein RBBP4	gi|460375305|ref|XP_004233447.1|//PREDICTED: uncharacterized protein LOC101268835 isoform X1 [Solanum lycopersicum];gi|723677341|ref|XP_010317167.1|//PREDICTED: uncharacterized protein LOC101268835 isoform X2 [Solanum lycopersicum]
Solyc09g010510.3.1	1330	186.877917497627	91.1754469230634	-1.03537883104732	0.000226609589479799	Down	1.98134193360065e-05	NA	GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	GO:0008152//metabolic process	K11153//retinol dehydrogenase 12 [EC:1.1.1.300]	gi|697140349|ref|XP_009624274.1|//PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like isoform X1 [Nicotiana tomentosiformis];gi|460401877|ref|XP_004246442.1|//PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Solanum lycopersicum]
Solyc07g054310.2.1	306	35.307602606147	6.93783478160001	-2.34742147547837	0.0169124593755251	Down	0.00333196714721875	NA	NA	NA	NA	gi|723715177|ref|XP_010323730.1|//PREDICTED: putative cell wall protein [Solanum lycopersicum]
Solyc01g066200.1.1	270	140.408659611787	37.8325302227122	-1.89193274412862	0.000580802691287378	Down	5.94787406201746e-05	NA	NA	NA	NA	NA
Solyc05g043390.2.1	3224	137.435676650651	10.1714284242283	-3.75616235570657	1.45586457614425e-14	Down	1.29264123389783e-16	NA	NA	NA	K02886//large subunit ribosomal protein L2;K00670//peptide alpha-N-acetyltransferase [EC:2.3.1.88]	gi|698477662|ref|XP_009786038.1|//PREDICTED: uncharacterized protein LOC104234204 [Nicotiana sylvestris]
Solyc01g006140.3.1	1869	132.635237535913	45.9312753866475	-1.52991536183338	0.000124950137235181	Down	9.90481336172035e-06	NA	NA	NA	K10727//chromatin licensing and DNA replication factor 1	gi|723655880|ref|XP_010316139.1|//PREDICTED: CDT1-like protein a, chloroplastic [Solanum lycopersicum]
Solyc08g077490.2.1	2177	8.83913895821045	77.7906902098713	3.13761976232356	0.000159014548355148	Up	1.31435275672032e-05	NA	NA	NA	K19525//vacuolar protein sorting-associated protein 13A/C	gi|723725371|ref|XP_010325533.1|//PREDICTED: uncharacterized protein LOC101254928 isoform X2 [Solanum lycopersicum]
Solyc06g053810.3.1	1958	1198.33216586328	580.620427582093	-1.04536062905494	8.38585156179089e-05	Down	6.27203645780297e-06	NA	NA	NA	NA	gi|460390831|ref|XP_004241028.1|//PREDICTED: uncharacterized protein LOC101254392 [Solanum lycopersicum]
Solyc02g064940.1.1	1395	70.2414413443286	14.652715476519	-2.26115439592875	0.00247256561936138	Down	0.000329677494072332	NA	NA	NA	K02984//small subunit ribosomal protein S3Ae;K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|460375301|ref|XP_004233445.1|//PREDICTED: uncharacterized protein At4g06744-like [Solanum lycopersicum]
Solyc04g071320.3.1	2794	628.301036938041	242.093978127347	-1.37588876706137	0.000276954208854542	Down	2.49446341609395e-05	NA	NA	NA	NA	gi|723693809|ref|XP_010320080.1|//PREDICTED: protein FAM188A [Solanum lycopersicum]
Solyc07g065110.1.1	315	36.3046010053211	10.0485758575977	-1.85316134865725	0.0391291457521881	Down	0.00943044799430087	NA	NA	NA	K02605//origin recognition complex subunit 3	gi|723718178|ref|XP_010324294.1|//PREDICTED: putative lipid-transfer protein DIR1 [Solanum lycopersicum]
Solyc02g087070.3.1	3105	1737.92681264637	289.366198169131	-2.58639901803652	2.1580417744807e-11	Down	3.32880785378889e-13	NA	GO:0016209//antioxidant activity;GO:0005506//iron ion binding	GO:0008152//metabolic process;GO:0006950//response to stress	K10529//alpha-dioxygenase [EC:1.-.-.-]	gi|930425278|ref|NP_001234410.2|//alpha-DOX1 [Solanum lycopersicum]
Solyc09g007100.3.1	6817	501.397583753474	1343.52983361308	1.42200140840208	2.68379325094416e-12	Up	3.58444922530164e-14	GO:0009506//plasmodesma;GO:0005886//plasma membrane	NA	NA	NA	gi|460402436|ref|XP_004246718.1|//PREDICTED: uncharacterized protein LOC101264361 [Solanum lycopersicum]
Solyc03g123580.3.1	13262	47.8965855394156	108.998709921375	1.18631634213238	0.0104578404919458	Up	0.00186690944824239	NA	NA	NA	K00921//1-phosphatidylinositol-3-phosphate 5-kinase [EC:2.7.1.150]	gi|723684674|ref|XP_010318454.1|//PREDICTED: 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B-like isoform X1 [Solanum lycopersicum]
Solyc11g066670.1.1	1404	623.194749166772	122.97003881245	-2.34137622662109	7.19290488487802e-06	Down	3.82647385523609e-07	NA	NA	NA	K13495//cis-zeatin O-glucosyltransferase [EC:2.4.1.215]	gi|460411198|ref|XP_004251001.1|//PREDICTED: zeatin O-glucosyltransferase-like [Solanum lycopersicum]
Solyc06g054570.1.1	312	11.0993303758119	45.4602219599059	2.03413208694056	0.00981591123074588	Up	0.00172788124518045	NA	NA	NA	K03676//glutaredoxin 3	gi|460390917|ref|XP_004241071.1|//PREDICTED: monothiol glutaredoxin-S4-like [Solanum lycopersicum]
Solyc02g092215.1.1	1323	215.604962573251	73.9687279918627	-1.54340301323246	0.0485585695650058	Down	0.0124335823042965	NA	NA	NA	K08238//xyloglucan 6-xylosyltransferase [EC:2.4.2.39]	gi|460372235|ref|XP_004231937.1|//PREDICTED: putative glycosyltransferase 7 [Solanum lycopersicum]
Solyc10g080920.2.1	1827	237.280136612659	572.557964425425	1.27083042213672	9.99247184920253e-07	Up	4.09774052506801e-08	NA	NA	NA	NA	gi|460407764|ref|XP_004249320.1|//PREDICTED: protein RADIALIS-like 1 [Solanum lycopersicum]
Solyc07g064370.1.1	1578	1.77844647909867	160.640114551345	6.49707083463382	4.74218692797873e-25	Up	1.14183582915966e-27	NA	NA	NA	K12448//UDP-arabinose 4-epimerase [EC:5.1.3.5]	gi|723718362|ref|XP_010324319.1|//PREDICTED: uncharacterized protein LOC101267913 [Solanum lycopersicum]
Solyc03g025180.2.1	492	36.2650595741717	9.55615313247215	-1.92407834134334	0.00110629612026523	Down	0.000126487355511137	NA	NA	NA	NA	gi|970019011|ref|XP_015070693.1|//PREDICTED: scarecrow-like protein 8 [Solanum pennellii]
Solyc03g005420.2.1	2084	105.227173052251	268.235548750143	1.34999314439643	0.000704723319944602	Up	7.43167594358435e-05	NA	NA	NA	K07192//flotillin	gi|565379282|ref|XP_006356057.1|//PREDICTED: flotillin-like protein 6 [Solanum tuberosum];gi|460376492|ref|XP_004234032.1|//PREDICTED: flotillin-like protein 6 [Solanum lycopersicum]
Solyc11g012320.2.1	1011	802.613824125454	1989.92903007643	1.3099390683638	1.00016072238552e-06	Up	4.10524961671407e-08	NA	NA	NA	K10601//E3 ubiquitin-protein ligase synoviolin [EC:2.3.2.27];K14306//nuclear pore complex protein Nup62	gi|414886003|tpg|DAA62017.1|//TPA: hypothetical protein ZEAMMB73_435415 [Zea mays]
Solyc02g068830.2.1	3385	381.761730764764	796.31891284634	1.06067383372727	0.0070948272735784	Up	0.00117366273596404	NA	NA	NA	K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|565393918|ref|XP_006362615.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Solanum tuberosum]
BGI_novel_G000043	1910	7.38078504138843	29.183345664995	1.98329910883366	0.00153146214218538	Up	0.000185872718987586	NA	NA	NA	NA	NA
Solyc05g017940.3.1	651	9.47998696802869	29.9500689194493	1.65960234187822	0.0134943236274853	Up	0.00252523573074161	NA	NA	NA	NA	gi|970030322|ref|XP_015076444.1|//PREDICTED: uncharacterized protein LOC107020548 isoform X5 [Solanum pennellii]
Solyc05g054890.3.1	3109	86.8072953779144	36.1232735928332	-1.26488765356585	0.0048740415799894	Down	0.000745959411113501	GO:0044464//cell part	GO:0015604//organic phosphonate transmembrane transporter activity;GO:0032559//adenyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity	GO:0009207//purine ribonucleoside triphosphate catabolic process	K05681//ATP-binding cassette, subfamily G (WHITE), member 2	gi|970027523|ref|XP_015075061.1|//PREDICTED: ABC transporter G family member 6 [Solanum pennellii];gi|460388206|ref|XP_004239760.1|//PREDICTED: ABC transporter G family member 6 [Solanum lycopersicum]
Solyc06g083250.3.1	1230	95.6718774300044	197.782665681718	1.04774917451333	0.000296048959811024	Up	2.70320099872594e-05	NA	NA	NA	NA	gi|460393648|ref|XP_004242421.1|//PREDICTED: SKI/DACH domain-containing protein 1 [Solanum lycopersicum]
Solyc11g006650.2.1	2753	137.87792654914	39.5531798630087	-1.8015259188891	0.023889230075165	Down	0.00508612313752291	NA	NA	NA	K03695//ATP-dependent Clp protease ATP-binding subunit ClpB	gi|460410098|ref|XP_004250468.1|//PREDICTED: uncharacterized protein LOC101244337 [Solanum lycopersicum]
Solyc02g011980.1.1	231	332.391629837755	717.925036628855	1.11094915728484	4.52452975650433e-05	Up	3.08614463827778e-06	GO:0030529//intracellular ribonucleoprotein complex;GO:0009536//plastid	GO:0003723//RNA binding;GO:0005198//structural molecule activity	GO:0010467//gene expression	K02892//large subunit ribosomal protein L23	gi|675895186|ref|YP_009049660.1|//hypothetical protein (mitochondrion) [Capsicum annuum]
Solyc05g053120.1.1	1410	24.6947280131063	6.5707843450329	-1.91006558064793	0.0326153585206177	Down	0.00748140861174591	NA	NA	NA	K13495//cis-zeatin O-glucosyltransferase [EC:2.4.1.215]	gi|460389145|ref|XP_004240219.1|//PREDICTED: zeatin O-xylosyltransferase-like [Solanum lycopersicum]
Solyc06g075220.1.1	750	25.3232922418443	9.58828307056272	-1.40112057273407	0.0429662847831821	Down	0.0105810123893153	NA	NA	NA	K19519//transforming growth factor-beta-induced protein	gi|460391320|ref|XP_004241271.1|//PREDICTED: fasciclin-like arabinogalactan protein 11 [Solanum lycopersicum]
Solyc10g086280.2.1	1420	24764.5040515517	5566.84783408506	-2.1533411752171	4.79184128165571e-34	Down	6.12951856946178e-37	NA	NA	NA	NA	gi|460408362|ref|XP_004249614.1|//PREDICTED: uncharacterized protein LOC101259996 [Solanum lycopersicum]
Solyc03g026150.3.1	1373	551.584089476584	1157.20591314809	1.06899285253748	5.23218643118275e-10	Up	1.08068861953323e-11	NA	NA	NA	K19045//E3 ubiquitin-protein ligase BIG BROTHER and related proteins [EC:2.3.2.27]	gi|723679465|ref|XP_010317579.1|//PREDICTED: E3 ubiquitin ligase BIG BROTHER-like isoform X1 [Solanum lycopersicum]
Solyc02g070430.3.1	1367	9.04318329058381	34.7302898249456	1.94129183990859	0.0143187896736708	Up	0.00271130430502578	NA	GO:0046914//transition metal ion binding;GO:0003824//catalytic activity	GO:0008152//metabolic process	K04125//gibberellin 2-oxidase [EC:1.14.11.13]	gi|460374662|ref|XP_004233129.1|//PREDICTED: gibberellin 2-beta-dioxygenase 1-like [Solanum lycopersicum]
Solyc12g044820.2.1	4713	1182.08500157738	436.333916822674	-1.43782925500252	0.000157355391359568	Down	1.29827077972736e-05	NA	NA	NA	K05670//ATP-binding cassette, subfamily C (CFTR/MRP), member 13;K05666//ATP-binding cassette, subfamily C (CFTR/MRP), member 2;K05665//ATP-binding cassette, subfamily C (CFTR/MRP), member 1	gi|565401314|ref|XP_006366148.1|//PREDICTED: ABC transporter C family member 8 [Solanum tuberosum];gi|723751108|ref|XP_004252373.2|//PREDICTED: ABC transporter C family member 8 isoform X1 [Solanum lycopersicum]
Solyc07g052350.3.1	3830	19333.1618555989	8361.8877469565	-1.20917702206574	3.52875463813069e-09	Down	8.41696930238847e-11	NA	GO:0016836//hydro-lyase activity;GO:0051536//iron-sulfur cluster binding	NA	K01681//aconitate hydratase [EC:4.2.1.3]	gi|460395806|ref|XP_004243472.1|//PREDICTED: aconitate hydratase, cytoplasmic [Solanum lycopersicum]
Solyc07g054770.1.1	270	56.0712438486283	13.0569208515009	-2.10244636056246	0.00759331831833876	Down	0.00127355203397871	NA	NA	NA	NA	gi|723715060|ref|XP_010323709.1|//PREDICTED: uncharacterized protein LOC101254505 [Solanum lycopersicum]
Solyc01g087800.2.1	2364	254.313365237166	647.208044582879	1.34762225638983	0.000285888600154659	Up	2.59214268763253e-05	NA	GO:0004175//endopeptidase activity;GO:0005515//protein binding	GO:0044092//negative regulation of molecular function;GO:0019538//protein metabolic process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13199//plasminogen activator inhibitor 1 RNA-binding protein;K12663//Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase [EC:5.3.3.-];K01183//chitinase [EC:3.2.1.14]	gi|723660040|ref|XP_004229664.2|//PREDICTED: subtilisin-like protease [Solanum lycopersicum]
BGI_novel_G000222	695	34.3264589856831	7.52295818018866	-2.18994906526879	0.00905786174929496	Down	0.00157116584544681	NA	NA	NA	K07441//beta-1,4-N-acetylglucosaminyltransferase [EC:2.4.1.141]	gi|460387861|ref|XP_004239591.1|//PREDICTED: uncharacterized protein LOC101259247 [Solanum lycopersicum]
Solyc12g006690.2.1	2338	132.437645672489	38.4201319736607	-1.78537888966457	0.00507523749743816	Down	0.00078419866072154	NA	NA	NA	K08286//protein-serine/threonine kinase [EC:2.7.11.-]	gi|460412372|ref|XP_004251575.1|//PREDICTED: protein kinase PINOID 2 [Solanum lycopersicum]
Solyc04g005050.1.1	1104	3871.72246544343	1836.17734467173	-1.07627013419807	7.06729350648277e-07	Down	2.79979686317771e-08	NA	GO:0070011//peptidase activity, acting on L-amino acid peptides;GO:0046872//metal ion binding	GO:0008152//metabolic process	K07761//gelatinase A [EC:3.4.24.24]	gi|525314090|ref|NP_001266203.1|//matrix metalloproteinase precursor [Solanum lycopersicum]
Solyc04g074450.1.1	945	1914.35629972616	792.695094028861	-1.27202141628411	0.000196255667805385	Down	1.67312017775396e-05	NA	NA	NA	K14299//nucleoporin SEH1	gi|723694393|ref|XP_010320183.1|//PREDICTED: protein EXORDIUM-like [Solanum lycopersicum]
Solyc06g067980.3.1	688	138.69112083125	375.582275414064	1.43725355293814	0.000226722735075065	Up	1.9831841950697e-05	NA	NA	NA	NA	gi|460392200|ref|XP_004241705.1|//PREDICTED: uncharacterized protein LOC101265833 [Solanum lycopersicum]
Solyc06g011470.3.1	368	53.2318353973954	243.406414734507	2.19300597397363	2.35782357883727e-19	Up	1.19754019241171e-21	NA	NA	NA	NA	NA
Solyc06g053710.3.1	3129	9189.2794104084	2229.36224464462	-2.04332067879776	7.19476068160358e-25	Down	1.81357774893694e-27	GO:0031090//organelle membrane;GO:0016021//integral component of membrane;GO:0005789//endoplasmic reticulum membrane	GO:0000155//phosphorelay sensor kinase activity;GO:0051740//ethylene binding;GO:0032559//adenyl ribonucleotide binding;GO:0038199//ethylene receptor activity;GO:0004871//signal transducer activity;GO:0004673//protein histidine kinase activity	GO:0010105//negative regulation of ethylene-activated signaling pathway;GO:0023014//signal transduction by protein phosphorylation;GO:0018106//peptidyl-histidine phosphorylation;GO:0000160//phosphorelay signal transduction system;GO:0006468//protein phosphorylation;GO:0006351//transcription, DNA-templated	K14509//ethylene receptor [EC:2.7.13.-]	gi|350535641|ref|NP_001234205.1|//ethylene receptor homolog precursor [Solanum lycopersicum]
Solyc03g117020.3.1	1098	7176.07577293301	2447.72879332041	-1.55175140664539	8.0196106815584e-15	Down	6.81878109116704e-17	GO:0044464//cell part	NA	NA	NA	gi|460380383|ref|XP_004235936.1|//PREDICTED: stromal cell-derived factor 2-like protein [Solanum lycopersicum]
Solyc09g014720.2.1	3506	841.938299826934	188.217869728688	-2.16131090492382	7.03099508820474e-06	Down	3.70849645313603e-07	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723726950|ref|XP_004246830.2|//PREDICTED: wall-associated receptor kinase 2-like [Solanum lycopersicum]
Solyc12g096730.3.1	1796	25.3716510367314	71.5876558332282	1.49649343433449	0.00592624080146952	Up	0.000944627877904559	NA	GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds	GO:0044238//primary metabolic process;GO:0045229//external encapsulating structure organization	K01184//polygalacturonase [EC:3.2.1.15]	gi|723753361|ref|XP_010314782.1|//PREDICTED: polygalacturonase-like [Solanum lycopersicum]
Solyc01g091510.3.1	2850	934.657563525809	448.971713492363	-1.05781333848982	4.0996651189101e-13	Down	4.81169916745314e-15	NA	NA	NA	K20473//neuroblastoma-amplified sequence	gi|460367936|ref|XP_004229826.1|//PREDICTED: ankyrin repeat and zinc finger domain-containing protein 1 [Solanum lycopersicum]
Solyc09g007320.3.1	2220	16.8790398779235	1.97562027038839	-3.09485526081896	0.000938524254864456	Down	0.000104374631203135	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial	gi|723728484|ref|XP_010326020.1|//PREDICTED: pentatricopeptide repeat-containing protein At3g09650, chloroplastic [Solanum lycopersicum]
Solyc01g102490.3.1	4188	886.016119615536	2693.77622140588	1.60422515595379	6.22378362314453e-29	Up	1.05368797231566e-31	GO:0005759//mitochondrial matrix;GO:0005886//plasma membrane	GO:0050660//flavin adenine dinucleotide binding;GO:0016731//oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor	GO:0022900//electron transport chain	K18914//adrenodoxin-NADP+ reductase [EC:1.18.1.6]	gi|723663482|ref|XP_010314053.1|//PREDICTED: NADPH:adrenodoxin oxidoreductase, mitochondrial isoform X1 [Solanum lycopersicum];gi|460369055|ref|XP_004230380.1|//PREDICTED: NADPH:adrenodoxin oxidoreductase, mitochondrial isoform X2 [Solanum lycopersicum]
Solyc02g020940.3.1	1504	1863.33429143509	3823.70500488815	1.03708470093441	2.8194167391613e-06	Up	1.32060716337691e-07	GO:0009536//plastid	GO:0000166//nucleotide binding	GO:0015977//carbon fixation;GO:0019318//hexose metabolic process	K05298//glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) [EC:1.2.1.13]	gi|460371392|ref|XP_004231523.1|//PREDICTED: glyceraldehyde-3-phosphate dehydrogenase A, chloroplastic-like [Solanum lycopersicum]
Solyc10g018780.2.1	1350	107.565292250498	39.0751774258191	-1.46088831408391	0.0316780404583372	Down	0.00720167705179139	NA	NA	NA	K20641;K13415//protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1]	gi|460406187|ref|XP_004248549.1|//PREDICTED: squamosa promoter-binding-like protein 8 [Solanum lycopersicum]
Solyc06g075520.3.1	2732	22.7891819742181	62.0810682753391	1.44580424378875	0.00195458750737782	Up	0.000249657372037757	NA	NA	NA	K05021//chloride intracellular channel protein 1;K05022//chloride intracellular channel protein 2	gi|723710799|ref|XP_010322957.1|//PREDICTED: uncharacterized protein LOC101254215 [Solanum lycopersicum]
Solyc02g079550.2.1	3857	35.9509618955921	76.2997673663121	1.08564828677606	0.0231161018251395	Up	0.00489217865842599	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|723678216|ref|XP_010317324.1|//PREDICTED: uncharacterized protein LOC101264093 [Solanum lycopersicum]
Solyc01g008450.1.1	834	2.94135271011915	17.5303417378442	2.57530242096869	0.00172425213461584	Up	0.000214034776610094	NA	NA	NA	NA	gi|356530951|ref|XP_003534042.1|//PREDICTED: nucleolin-like [Glycine max]
Solyc04g047727.1.1	646	56.537654969953	271.419179624705	2.26323872087115	9.15243839384261e-09	Up	2.43445219881367e-10	NA	NA	NA	NA	gi|970025481|ref|XP_015074051.1|//PREDICTED: ER membrane protein complex subunit 10 [Solanum pennellii]
Solyc01g107790.2.1	1220	120.54713794533	51.2995245770708	-1.23258003788624	0.00256319539525802	Down	0.000345230982506536	NA	NA	NA	K02984//small subunit ribosomal protein S3Ae;K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|460371120|ref|XP_004231393.1|//PREDICTED: uncharacterized protein At4g06744 [Solanum lycopersicum]
Solyc05g013720.3.1	2462	502.231218352579	1230.03010718533	1.29227001507988	2.50735971808743e-07	Up	8.86726160647926e-09	NA	NA	NA	K07407//alpha-galactosidase [EC:3.2.1.22]	gi|460386921|ref|XP_004239142.1|//PREDICTED: uncharacterized protein LOC101245945 isoform X2 [Solanum lycopersicum];gi|460386919|ref|XP_004239141.1|//PREDICTED: uncharacterized protein LOC101245945 isoform X1 [Solanum lycopersicum]
Solyc01g109310.3.1	2462	1471.68040877014	3172.20525012482	1.10802171160941	4.33830193222124e-11	Up	7.23050322036873e-13	NA	GO:0022857//transmembrane transporter activity	GO:0006810//transport	K03327//multidrug resistance protein, MATE family	gi|460371180|ref|XP_004231421.1|//PREDICTED: protein TRANSPARENT TESTA 12-like [Solanum lycopersicum]
Solyc02g093530.3.1	707	6.70372137134298	71.0806363895414	3.40642250571035	3.66873284833317e-08	Up	1.09868748956855e-09	NA	GO:0032561//guanyl ribonucleotide binding;GO:0003824//catalytic activity	GO:0006810//transport;GO:0035556//intracellular signal transduction	K07877//Ras-related protein Rab-2A	gi|460372012|ref|XP_004231828.1|//PREDICTED: ras-related protein RABB1b [Solanum lycopersicum]
Solyc04g079020.3.1	1274	732.269369161763	1.79275067419489	-8.67405577877789	2.6783212226256e-48	Down	1.51146795859233e-51	GO:0005829//cytosol;GO:0016021//integral component of membrane	GO:0008690//3-deoxy-manno-octulosonate cytidylyltransferase activity	GO:0009103//lipopolysaccharide biosynthetic process	K00979//3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:2.7.7.38]	gi|697105535|ref|XP_009606581.1|//PREDICTED: 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial [Nicotiana tomentosiformis];gi|698428232|ref|XP_009789468.1|//PREDICTED: 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial-like [Nicotiana sylvestris]
Solyc06g066230.3.1	2595	15.0681351610965	50.0917248757755	1.73307141128782	0.00456825351031161	Up	0.000691081541194995	NA	NA	NA	K07418;K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30];K15472//premnaspirodiene oxygenase [EC:1.14.13.121]	gi|723709426|ref|XP_004242219.2|//PREDICTED: cytochrome P450 71D7-like [Solanum lycopersicum]
Solyc04g079190.3.1	1286	93.4098878291253	196.873065603905	1.07561856976136	5.23734041921471e-05	Up	3.65707442365031e-06	NA	NA	NA	K13258//2-hydroxyisoflavanone dehydratase [EC:4.2.1.105];K20506//tuliposide A-converting enzyme [EC:4.2.99.22]	gi|460384957|ref|XP_004238173.1|//PREDICTED: probable carboxylesterase 2 [Solanum lycopersicum]
Solyc11g042440.1.1	315	225.675120986866	109.708859178364	-1.04056735029523	5.84610387798876e-05	Down	4.15693616606424e-06	NA	NA	NA	NA	gi|460410598|ref|XP_004250712.1|//PREDICTED: uncharacterized protein LOC101265504 [Solanum lycopersicum]
Solyc01g088090.3.1	2004	1402.18144631515	698.139344897385	-1.00608612577967	0.0101328981371176	Down	0.0017936525859721	NA	NA	NA	NA	gi|460367643|ref|XP_004229681.1|//PREDICTED: pheophytinase, chloroplastic [Solanum lycopersicum]
Solyc05g052640.3.1	1878	454.741815330551	169.644361487971	-1.42253419213706	9.38214817053645e-13	Down	1.16482652230136e-14	GO:0031224//intrinsic component of membrane	NA	GO:0051234//establishment of localization	K13354//solute carrier family 25 (peroxisomal adenine nucleotide transporter), member 17	gi|460388566|ref|XP_004239938.1|//PREDICTED: peroxisomal nicotinamide adenine dinucleotide carrier [Solanum lycopersicum]
Solyc05g052570.3.1	1317	2777.62809844382	645.202193824103	-2.10603019816684	3.83967683296454e-13	Down	4.46373266134704e-15	NA	NA	NA	K15172//transcription elongation factor SPT5;K07560//D-tyrosyl-tRNA(Tyr) deacylase [EC:3.1.-.-]	gi|460388576|ref|XP_004239943.1|//PREDICTED: zinc finger CCCH domain-containing protein 29-like [Solanum lycopersicum]
Solyc06g084470.3.1	559	104.990411043916	272.817744400276	1.37767991199511	8.17513057974665e-05	Up	6.07695137890068e-06	NA	NA	NA	NA	gi|460393444|ref|XP_004242319.1|//PREDICTED: uncharacterized protein LOC101248403 [Solanum lycopersicum]
Solyc07g008820.3.1	2374	162.849023963305	58.3402911781288	-1.48097058105696	0.000898996909783917	Down	9.89606631299234e-05	NA	NA	NA	K16573//gamma-tubulin complex component 6	gi|697171045|ref|XP_009594450.1|//PREDICTED: protein trichome birefringence-like 14 [Nicotiana tomentosiformis];gi|723713046|ref|XP_010323348.1|//PREDICTED: protein trichome birefringence-like 14 [Solanum lycopersicum]
Solyc03g113420.3.1	3231	996.5024908009	267.207578791856	-1.8989124836857	1.25491923712526e-05	Down	7.16219895680592e-07	NA	NA	NA	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460380875|ref|XP_004236179.1|//PREDICTED: protein NRT1/ PTR FAMILY 2.11-like [Solanum lycopersicum]
BGI_novel_G000496	700	34.1540355335786	12.4369974687221	-1.4574178198312	0.0472982130166746	Down	0.0120167356095411	NA	NA	NA	NA	NA
BGI_novel_G000243	573	2.06105377311476	7.97784769411614	1.95261743561638	0.0459499117640411	Up	0.0115704574656406	NA	NA	NA	NA	NA
Solyc11g010960.2.1	1698	240.265037465992	84.3758917421824	-1.50972397813501	0.0245889764548213	Down	0.00525915467064179	NA	GO:0046914//transition metal ion binding;GO:0003824//catalytic activity	GO:0008152//metabolic process	K00083//cinnamyl-alcohol dehydrogenase [EC:1.1.1.195]	gi|460409485|ref|XP_004250169.1|//PREDICTED: 8-hydroxygeraniol dehydrogenase-like [Solanum lycopersicum]
Solyc06g035690.3.1	1700	247.646282655917	630.877417041007	1.3490787435689	5.19363715233172e-09	Up	1.30915609182177e-10	NA	NA	NA	NA	gi|460390233|ref|XP_004240743.1|//PREDICTED: post-GPI attachment to proteins factor 3-like [Solanum lycopersicum]
Solyc01g008600.3.1	4580	324.165621785924	154.998862812866	-1.06447346830381	0.00507216694233066	Down	0.000783533388457851	NA	GO:0003723//RNA binding;GO:0046872//metal ion binding;GO:0000166//nucleotide binding	NA	NA	gi|460365243|ref|XP_004228513.1|//PREDICTED: zinc finger CCCH domain-containing protein 46-like isoform X2 [Solanum lycopersicum]
Solyc11g010210.1.1	1926	111.220990871326	42.4462695725711	-1.38971942337818	0.000971804869186374	Down	0.000108660800271704	NA	NA	NA	K11498//centromeric protein E;K20283//golgin subfamily A member 4;K10400//kinesin family member 15;K20478//golgin subfamily B member 1	gi|460410189|ref|XP_004250513.1|//PREDICTED: putative WEB family protein At1g65010, chloroplastic [Solanum lycopersicum]
BGI_novel_G000330	3057	164.808749267994	381.893288071706	1.2123767307542	0.000119949264089258	Up	9.4271637578051e-06	NA	NA	NA	NA	gi|970045439|ref|XP_015084164.1|//PREDICTED: uncharacterized protein LOC107027531 [Solanum pennellii]
Solyc01g006540.3.1	2950	106.151831584629	250.607194070479	1.23929856579162	0.00429852460288041	Up	0.000642191166216633	GO:0009534//chloroplast thylakoid;GO:0009570//chloroplast stroma	GO:0016702//oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen;GO:0046872//metal ion binding;GO:0016165//linoleate 13S-lipoxygenase activity	GO:0006633//fatty acid biosynthetic process;GO:0055114//oxidation-reduction process;GO:0031408//oxylipin biosynthetic process	K00454//lipoxygenase [EC:1.13.11.12]	gi|697160375|ref|XP_009588960.1|//PREDICTED: linoleate 13S-lipoxygenase 2-1, chloroplastic-like [Nicotiana tomentosiformis];gi|795881064|ref|NP_001233812.2|//lipoxygenase [Solanum lycopersicum]
Solyc04g008790.1.1	834	161.192332766605	77.1730590245068	-1.06261392437019	3.3763467595537e-05	Down	2.22041163871327e-06	NA	NA	NA	K14775//ribosome biogenesis protein UTP30	gi|460382909|ref|XP_004237178.1|//PREDICTED: ribosomal L1 domain-containing protein 1 [Solanum lycopersicum]
Solyc07g066180.2.1	2391	23.1555110572053	8.30908995418771	-1.47859321776424	0.0336451140862238	Down	0.00778723633778964	NA	GO:0000166//nucleotide binding	NA	K13457//disease resistance protein RPM1	gi|460397546|ref|XP_004244328.1|//PREDICTED: uncharacterized protein LOC101258676 [Solanum lycopersicum]
Solyc10g086180.2.1	2534	6318.43860476494	2116.19119146698	-1.57809811113093	9.27153021735637e-08	Down	3.01725870504637e-09	GO:0044424//intracellular part;GO:0005737//cytoplasm	GO:0016840//carbon-nitrogen lyase activity;GO:0045548//phenylalanine ammonia-lyase activity	GO:0006558//L-phenylalanine metabolic process;GO:0009800//cinnamic acid biosynthetic process;GO:0006559//L-phenylalanine catabolic process	K10775//phenylalanine ammonia-lyase [EC:4.3.1.24]	gi|460408248|ref|XP_004249558.1|//PREDICTED: phenylalanine ammonia-lyase [Solanum lycopersicum];gi|697142582|ref|XP_009625397.1|//PREDICTED: phenylalanine ammonia-lyase [Nicotiana tomentosiformis]
Solyc09g007940.3.1	1459	119.272643975313	41.9690695034987	-1.50686480596935	0.0483057112434819	Down	0.0123526681460476	NA	GO:0019206//nucleoside kinase activity	GO:0043101//purine-containing compound salvage;GO:0006796//phosphate-containing compound metabolic process	K00856//adenosine kinase [EC:2.7.1.20]	gi|460402303|ref|XP_004246653.1|//PREDICTED: adenosine kinase 2-like [Solanum lycopersicum]
Solyc03g013610.1.1	168	26.6170299597305	733.029934565088	4.78345061119203	3.96229471105455e-81	Up	1.04349371622956e-84	GO:0043229//intracellular organelle;GO:0044444//cytoplasmic part	NA	NA	K02911//large subunit ribosomal protein L32	gi|81301626|ref|YP_398921.1|//ribosomal protein L32 [Nicotiana tomentosiformis]
BGI_novel_G000420	1329	77.3766998014447	217.700214080595	1.49237172350692	0.00118709188048361	Up	0.000137377525371241	NA	NA	NA	NA	gi|255633684|gb|ACU17202.1|//unknown [Glycine max]
Solyc07g043500.1.1	1326	55.0185608174491	13.4233056443225	-2.03517840630927	0.0321073179843731	Down	0.00732984219447614	NA	NA	NA	K13080//flavanone 7-O-glucoside 2''-O-beta-L-rhamnosyltransferase [EC:2.4.1.236];K18823//soyasaponin III rhamnosyltransferase [EC:2.4.1.273]	gi|460396139|ref|XP_004243636.1|//PREDICTED: crocetin glucoside glucosyltransferase-like [Solanum lycopersicum]
Solyc11g020217.1.1	1056	63.7421435418436	9.35380258217784	-2.76862265014206	0.000296195683003565	Down	2.70565507273384e-05	NA	NA	NA	NA	gi|565353569|ref|XP_006343702.1|//PREDICTED: uncharacterized protein LOC102605937 [Solanum tuberosum]
Solyc12g006220.2.1	1949	318.851667397539	155.008715722389	-1.04053608898772	2.9593420490654e-05	Down	1.91833948477791e-06	NA	NA	NA	K12598//ATP-dependent RNA helicase DOB1 [EC:3.6.4.13]	gi|460412313|ref|XP_004251546.1|//PREDICTED: uncharacterized protein LOC101257044 [Solanum lycopersicum]
Solyc06g053220.3.1	1140	1047.03525846867	463.842067542814	-1.17460445088213	0.000266706387424571	Down	2.39212952453039e-05	NA	NA	NA	K09338//homeobox-leucine zipper protein	gi|460390726|ref|XP_004240976.1|//PREDICTED: homeobox-leucine zipper protein ATHB-12-like [Solanum lycopersicum]
Solyc11g069880.1.1	639	7.53949164714278	23.8970786241496	1.66429510438409	0.027392021885723	Up	0.00602328894935193	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723745947|ref|XP_010313436.1|//PREDICTED: kiwellin-like [Solanum lycopersicum]
Solyc03g117810.3.1	2400	846.324618159701	2046.04000732688	1.27355131721557	2.67142735572573e-13	Up	2.96490244521855e-15	NA	GO:0015114//phosphate ion transmembrane transporter activity;GO:0032559//adenyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity	GO:0009207//purine ribonucleoside triphosphate catabolic process	K05658//ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:3.6.3.44]	gi|460380258|ref|XP_004235874.1|//PREDICTED: ABC transporter I family member 17 [Solanum lycopersicum]
Solyc11g071830.2.1	1676	196.31766377888	81.1212174412518	-1.2750387767224	0.002191646007714	Down	0.000285540636746185	NA	GO:0005515//protein binding	NA	K09503//DnaJ homolog subfamily A member 2	gi|460411645|ref|XP_004251216.1|//PREDICTED: dnaJ protein homolog [Solanum lycopersicum]
Solyc06g008620.1.1	1983	5441.78347381635	2401.01657522185	-1.180434190395	4.12161480415155e-05	Down	2.76480029939888e-06	NA	NA	NA	NA	gi|460389749|ref|XP_004240512.1|//PREDICTED: uncharacterized protein LOC101247825 [Solanum lycopersicum]
Solyc07g063690.1.1	342	158.373550159154	73.0425853113122	-1.11652167726478	0.0220380596599499	Down	0.00461572152471561	NA	GO:0046872//metal ion binding	NA	K16465//centrin-1	gi|460397242|ref|XP_004244177.1|//PREDICTED: calcium-binding protein PBP1 [Solanum lycopersicum]
Solyc01g007230.3.1	690	200.261183733041	94.4389194457551	-1.08442937354959	7.41789316925028e-05	Down	5.43364860817543e-06	NA	NA	NA	NA	gi|723655547|ref|XP_010315565.1|//PREDICTED: protein YLS9-like [Solanum lycopersicum]
BGI_novel_G000367	855	524.269059413161	1088.8638252544	1.05444422949503	0.0444130828183138	Up	0.011068181361494	NA	NA	NA	NA	gi|723731731|ref|XP_010326644.1|//PREDICTED: uncharacterized protein LOC104649361 [Solanum lycopersicum]
Solyc06g065470.3.1	2709	992.397563883564	2203.77669471016	1.15098794640378	7.66968678375127e-11	Up	1.33496370104633e-12	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K12812//ATP-dependent RNA helicase UAP56/SUB2 [EC:3.6.4.13];K18081//myotubularin-related protein 1/2 [EC:3.1.3.64 3.1.3.95];K19307//25S rRNA (uracil2634-N3)-methyltransferase [EC:2.1.1.313]	gi|970036866|ref|XP_015079777.1|//PREDICTED: uncharacterized protein LOC107023567 [Solanum pennellii];gi|460392430|ref|XP_004241819.1|//PREDICTED: uncharacterized protein LOC101249181 [Solanum lycopersicum]
Solyc03g007290.3.1	1805	82.1459204788587	175.715301887031	1.09697899650161	0.00558276106410227	Up	0.000878581246468766	NA	NA	NA	K01087//trehalose 6-phosphate phosphatase [EC:3.1.3.12]	gi|460376778|ref|XP_004234173.1|//PREDICTED: probable trehalose-phosphate phosphatase 2 [Solanum lycopersicum]
Solyc01g008420.3.1	1715	4.71001667869587	24.6383988469787	2.38710443027581	0.00325724055863821	Up	0.000460523326537335	NA	NA	NA	K20456//oxysterol-binding protein 1	gi|723655316|ref|XP_010315164.1|//PREDICTED: MATE efflux family protein 1-like [Solanum lycopersicum]
Solyc02g067920.3.1	1358	103.992318554567	1.43906796899983	-6.17519842267617	7.02673977378266e-19	Down	3.75393923204341e-21	NA	NA	NA	NA	gi|460375036|ref|XP_004233314.1|//PREDICTED: uncharacterized protein LOC101253652 [Solanum lycopersicum]
Solyc03g123710.3.1	2129	88.4100355437489	204.360490608843	1.20883425802993	5.11991339899057e-05	Up	3.5596689094562e-06	NA	NA	NA	NA	gi|460379543|ref|XP_004235521.1|//PREDICTED: uncharacterized protein LOC101243687 isoform X2 [Solanum lycopersicum]
Solyc09g007930.2.1	771	1407.60043505435	3710.15189616001	1.39824038787688	0.000624736485822901	Up	6.46125131500058e-05	GO:0044424//intracellular part	GO:0016840//carbon-nitrogen lyase activity	GO:0006558//L-phenylalanine metabolic process	K10775//phenylalanine ammonia-lyase [EC:4.3.1.24]	gi|970052129|ref|XP_015087665.1|//PREDICTED: phenylalanine ammonia-lyase-like [Solanum pennellii];gi|971587024|ref|XP_006367534.2|//PREDICTED: phenylalanine ammonia-lyase 1 [Solanum tuberosum]
Solyc11g066760.2.1	4899	457.049985856582	168.748409128154	-1.43747805484893	5.0042404820775e-05	Down	3.45853640540871e-06	GO:0030119//AP-type membrane coat adaptor complex	GO:0022892//substrate-specific transporter activity	GO:0015031//protein transport	K11824//AP-2 complex subunit alpha	gi|723745242|ref|XP_010313320.1|//PREDICTED: LOW QUALITY PROTEIN: AP-2 complex subunit alpha-1-like [Solanum lycopersicum]
Solyc01g005270.3.1	935	183.011006470111	374.633822423481	1.03355073754351	6.56274376386493e-08	Up	2.06906669455185e-09	NA	NA	NA	K14399//polyribonucleotide 5'-hydroxyl-kinase [EC:2.7.1.78];K19996//phosphatidylinositol transfer protein SFH5;K00133//aspartate-semialdehyde dehydrogenase [EC:1.2.1.11]	gi|460365711|ref|XP_004228741.1|//PREDICTED: SEC14 cytosolic factor [Solanum lycopersicum]
Solyc04g007470.3.1	2068	167.426953120305	335.415985235541	1.00241964849972	4.15706731868199e-05	Up	2.79483796030275e-06	NA	NA	NA	K12135//zinc finger protein CONSTANS	gi|723690355|ref|XP_010319411.1|//PREDICTED: putative zinc finger protein At1g68190 isoform X1 [Solanum lycopersicum];gi|460382506|ref|XP_004236980.1|//PREDICTED: putative zinc finger protein At1g68190 isoform X2 [Solanum lycopersicum]
BGI_novel_G000105	1521	2187.76974157858	4484.65078745162	1.03553474384244	0.00977620000014302	Up	0.00171800715578134	NA	NA	NA	K14431//transcription factor TGA	gi|970007060|ref|XP_015064398.1|//PREDICTED: transcription factor TGA5-like [Solanum pennellii]
Solyc04g007290.3.1	2360	11.7969176339567	47.1220648901203	1.9979928062664	0.000326278194607189	Up	3.027095665543e-05	NA	NA	NA	NA	gi|723690413|ref|XP_010319419.1|//PREDICTED: uncharacterized protein LOC101250495 isoform X2 [Solanum lycopersicum];gi|460382484|ref|XP_004236969.1|//PREDICTED: uncharacterized protein LOC101250495 isoform X1 [Solanum lycopersicum];gi|723690416|ref|XP_010319420.1|//PREDICTED: uncharacterized protein LOC101250495 isoform X3 [Solanum lycopersicum]
Solyc05g014390.3.1	5021	2348.92677710131	597.740032440429	-1.97441166831865	5.2110697157454e-11	Down	8.84195802032045e-13	GO:0031224//intrinsic component of membrane	GO:0015405//P-P-bond-hydrolysis-driven transmembrane transporter activity;GO:0032559//adenyl ribonucleotide binding;GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;GO:0017111//nucleoside-triphosphatase activity	GO:0006810//transport;GO:0009207//purine ribonucleoside triphosphate catabolic process	K05666//ATP-binding cassette, subfamily C (CFTR/MRP), member 2	gi|460386996|ref|XP_004239178.1|//PREDICTED: putative ABC transporter C family member 15 [Solanum lycopersicum]
Solyc02g021050.3.1	1770	129.726020925447	270.797410919617	1.06174605571697	0.00221399700643608	Up	0.000288952430975423	NA	NA	NA	NA	gi|460371401|ref|XP_004231527.1|//PREDICTED: uncharacterized protein LOC101255042 [Solanum lycopersicum]
Solyc07g051980.2.1	2431	13.5403265272563	2.95190265972467	-2.19754547636822	0.0277867401841556	Down	0.00612826664637664	NA	NA	NA	K15083//DNA repair protein RAD16	gi|970040275|ref|XP_015081515.1|//PREDICTED: ATP-dependent helicase rhp16-like [Solanum pennellii]
Solyc10g019170.2.1	2293	843.814820488431	1810.33210074075	1.10125604834226	3.37314807904713e-06	Up	1.60408546723686e-07	NA	NA	NA	NA	gi|460400215|ref|XP_004245631.1|//PREDICTED: uncharacterized protein LOC101265850 [Solanum lycopersicum]
Solyc09g075060.3.1	1959	102.996395038626	233.166697883492	1.17876790708036	0.0032359270447512	Up	0.000456292496754232	NA	NA	NA	K01188//beta-glucosidase [EC:3.2.1.21]	gi|460403900|ref|XP_004247424.1|//PREDICTED: beta-glucosidase 11-like [Solanum lycopersicum]
Solyc06g076140.3.1	650	7194.79463400734	18282.6767345081	1.34545189547555	1.17184518707301e-11	Up	1.7414554134456e-13	NA	GO:0043169//cation binding	NA	NA	gi|350537383|ref|NP_001234291.1|//metallothionein-like protein type 2 [Solanum lycopersicum]
Solyc06g074490.1.1	186	135.54354959064	323.730957061	1.25603887303799	0.0161915174428224	Up	0.00315789414686197	NA	NA	NA	NA	NA
Solyc10g083890.2.1	2509	150.718967161626	42.6249627297537	-1.82209050588659	0.000509077298309425	Down	5.09525070688453e-05	NA	GO:0016836//hydro-lyase activity;GO:0046914//transition metal ion binding	GO:0044237//cellular metabolic process	K01674//carbonic anhydrase [EC:4.2.1.1]	gi|460408076|ref|XP_004249474.1|//PREDICTED: alpha carbonic anhydrase 7-like [Solanum lycopersicum]
Solyc12g006570.2.1	1897	10.8128026132565	27.7731605571049	1.36095085431079	0.0315523548164027	Up	0.00716634936142299	NA	NA	NA	K15803//(-)-germacrene D synthase [EC:4.2.3.22 4.2.3.75]	gi|356460901|ref|NP_001239041.1|//sesquiterpene synthase [Solanum lycopersicum]
Solyc01g096080.3.1	3468	394.545024131103	184.551823806583	-1.09616395018762	0.00875488984568643	Down	0.00150592010438218	NA	NA	NA	NA	gi|460368277|ref|XP_004229994.1|//PREDICTED: uncharacterized protein At4g00950-like [Solanum lycopersicum]
Solyc11g072140.2.1	4596	462.978728854229	168.617105261391	-1.4571950146287	2.68521712528757e-16	Down	1.86894344687058e-18	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K06892//feruloyl-CoA ortho-hydroxylase [EC:1.14.11.-]	gi|723746306|ref|XP_004251441.2|//PREDICTED: wall-associated receptor kinase 3-like [Solanum lycopersicum]
Solyc08g077560.3.1	3160	1784.67174394715	753.284636598945	-1.24439173197158	0.00669996396146973	Down	0.00109498282349979	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process	K00924	gi|460400640|ref|XP_004245841.1|//PREDICTED: probable receptor-like protein kinase At5g47070 [Solanum lycopersicum]
Solyc04g082170.3.1	1344	6.44527374047718	1.16947314206314	-2.46238290395545	0.0120798014894305	Down	0.0022114489859883	NA	GO:0016616//oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;GO:0046914//transition metal ion binding	GO:0008152//metabolic process	K00121//S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]	gi|460385435|ref|XP_004238409.1|//PREDICTED: alcohol dehydrogenase-like 7 [Solanum lycopersicum]
Solyc02g064640.3.1	2521	144.149482652188	358.841427601094	1.31578079737826	9.08321186744513e-05	Up	6.86195990588029e-06	GO:0005622//intracellular;GO:0009536//plastid	GO:0032559//adenyl ribonucleotide binding;GO:0016301//kinase activity;GO:0005525//GTP binding	GO:0006790//sulfur compound metabolic process;GO:0008652//cellular amino acid biosynthetic process;GO:0007264//small GTPase mediated signal transduction;GO:0006796//phosphate-containing compound metabolic process	K07955//ADP-ribosylation factor-like protein 8;K00860//adenylylsulfate kinase [EC:2.7.1.25]	gi|460375333|ref|XP_004233461.1|//PREDICTED: ADP-ribosylation factor-like protein 8A [Solanum lycopersicum];gi|460375329|ref|XP_004233459.1|//PREDICTED: adenylyl-sulfate kinase 3-like [Solanum lycopersicum]
Solyc03g111690.3.1	1988	264.909817476192	731.083618462754	1.46453511485563	7.4478918622407e-05	Up	5.46683108473725e-06	NA	GO:0003824//catalytic activity	NA	K01728//pectate lyase [EC:4.2.2.2]	gi|723708309|ref|XP_010322529.1|//PREDICTED: LOW QUALITY PROTEIN: probable pectate lyase 18 [Solanum lycopersicum];gi|460381125|ref|XP_004236303.1|//PREDICTED: probable pectate lyase 18 [Solanum lycopersicum]
Solyc06g071820.3.1	1620	423.935405511576	155.643362562428	-1.44560040581532	5.3386759297796e-05	Down	3.74189362572588e-06	GO:0043231//intracellular membrane-bounded organelle	GO:0000989//transcription factor activity, transcription factor binding;GO:0046914//transition metal ion binding;GO:0004468//lysine N-acetyltransferase activity, acting on acetyl phosphate as donor	GO:0006351//transcription, DNA-templated	K00517	gi|460391841|ref|XP_004241527.1|//PREDICTED: BTB/POZ and TAZ domain-containing protein 1-like [Solanum lycopersicum]
Solyc11g010270.2.1	1797	3511.31972226789	1570.82309321665	-1.16049265357211	0.00396887048780279	Down	0.000585027636238199	NA	NA	NA	K09338//homeobox-leucine zipper protein	gi|460409385|ref|XP_004250119.1|//PREDICTED: homeobox-leucine zipper protein ATHB-6 [Solanum lycopersicum]
Solyc07g043620.3.1	3577	241.116958643277	95.4319455354773	-1.33718893486522	0.0161470546193827	Down	0.00314387503939039	GO:0043231//intracellular membrane-bounded organelle	GO:0005515//protein binding;GO:0003676//nucleic acid binding	GO:0006351//transcription, DNA-templated;GO:0009755//hormone-mediated signaling pathway	K14486//auxin response factor	gi|300252249|gb|ADJ96372.1|//auxin response factor 6-1 [Solanum lycopersicum];gi|970041755|ref|XP_015082268.1|//PREDICTED: auxin response factor 6-like isoform X2 [Solanum pennellii]
Solyc11g005350.2.1	1550	499.835877206666	168.397518227	-1.56958358215061	1.922684024215e-05	Down	1.15881858795802e-06	NA	NA	NA	K00801//farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]	gi|723740407|ref|XP_010312462.1|//PREDICTED: WAT1-related protein At1g68170 [Solanum lycopersicum]
Solyc03g117050.3.1	6646	180.197266719958	86.476649423484	-1.05919459673303	0.0129804389881366	Down	0.00240953671811385	GO:0031224//intrinsic component of membrane;GO:0016021//integral component of membrane	GO:0005215//transporter activity	GO:0006810//transport	K09874//aquaporin NIP	gi|726965320|ref|NP_001289852.1|//aquaporin NIP6-1 [Solanum lycopersicum]
Solyc03g059200.2.1	1847	7.86367838150738	1.71440105242586	-2.19749967699008	0.0279067982524544	Down	0.00615881409138064	NA	NA	NA	K09422//myb proto-oncogene protein, plant	gi|460378214|ref|XP_004234868.1|//PREDICTED: myb-related protein 308 [Solanum lycopersicum]
Solyc10g080670.2.1	1174	6461.77182884073	2915.36441983963	-1.14825357737701	4.33983584312528e-06	Down	2.14216125890909e-07	NA	NA	NA	NA	gi|460407723|ref|XP_004249300.1|//PREDICTED: uncharacterized protein LOC101267365 [Solanum lycopersicum]
Solyc12g010120.2.1	2322	230.839207943994	108.496230572256	-1.08924336520998	0.000161826872040074	Down	1.34246897234148e-05	NA	NA	NA	K20720	gi|460412735|ref|XP_004251753.1|//PREDICTED: reticulon-like protein B21 [Solanum lycopersicum]
Solyc11g071760.3.1	597	2864.967028875	6303.84235175264	1.13771291992844	0.00245409573887185	Up	0.000326381807257788	NA	GO:0046872//metal ion binding	NA	K13448//calcium-binding protein CML	gi|350537863|ref|NP_001234570.1|//regulator of gene silencing [Solanum lycopersicum]
Solyc02g077060.2.1	480	244.510961030416	680.85126438284	1.47744052786372	3.72870826539136e-07	Up	1.3747682844558e-08	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K07195//exocyst complex component 7	gi|723675040|ref|XP_010316804.1|//PREDICTED: uncharacterized protein LOC104645842 [Solanum lycopersicum]
Solyc06g009380.3.1	1664	4282.04491482002	2135.45500668456	-1.00375642717975	8.06042906215191e-06	Down	4.36379135456606e-07	NA	NA	NA	NA	gi|460389852|ref|XP_004240562.1|//PREDICTED: uncharacterized protein LOC101264013 [Solanum lycopersicum]
Solyc09g014500.3.1	740	44.9326253255765	168.563101263282	1.9074534992608	2.57190934648087e-05	Up	1.62558604292245e-06	NA	NA	NA	K11968//ariadne-1 [EC:2.3.2.27]	gi|460401644|ref|XP_004246327.1|//PREDICTED: protein yippee-like [Solanum lycopersicum]
Solyc06g082030.3.1	1534	100.254163437114	38.271137868414	-1.38933345072281	0.00269056121029941	Down	0.000365227433308066	NA	NA	NA	K04125//gibberellin 2-oxidase [EC:1.14.11.13]	gi|460393846|ref|XP_004242519.1|//PREDICTED: gibberellin 2-beta-dioxygenase 8 [Solanum lycopersicum]
Solyc06g006080.3.1	2618	1281.33006161126	3029.94631733618	1.24165008152343	1.99612907333569e-06	Up	8.9367704938656e-08	GO:0009570//chloroplast stroma	GO:0080041//ADP-ribose pyrophosphohydrolase activity;GO:0003824//catalytic activity;GO:0051536//iron-sulfur cluster binding	GO:0009228//thiamine biosynthetic process;GO:0006772//thiamine metabolic process	K03147//phosphomethylpyrimidine synthase [EC:4.1.99.17]	gi|959092479|ref|NP_001304334.1|//phosphomethylpyrimidine synthase, chloroplastic [Solanum lycopersicum]
Solyc11g013450.2.1	3595	58.5359380996947	16.1186116891343	-1.8605951497897	0.00186952891827869	Down	0.000236469383869561	NA	NA	NA	NA	gi|460409848|ref|XP_004250349.1|//PREDICTED: histone-lysine N-methyltransferase, H3 lysine-79 specific-like [Solanum lycopersicum]
Solyc04g007640.3.1	2369	455.938381354792	160.055345285364	-1.51026800321853	1.16353375498064e-08	Down	3.16053939464266e-10	NA	NA	NA	K08332//vacuolar protein 8	gi|460382494|ref|XP_004236974.1|//PREDICTED: U-box domain-containing protein 11-like [Solanum lycopersicum]
Solyc03g025930.3.1	1262	163.865836808218	365.49441250746	1.15733424232708	0.000117143267042062	Up	9.15815308176847e-06	NA	NA	NA	K10269//F-box and leucine-rich repeat protein 3;K10268//F-box and leucine-rich repeat protein 2/20	gi|723679568|ref|XP_010317594.1|//PREDICTED: F-box/LRR-repeat protein At3g48880-like isoform X1 [Solanum lycopersicum]
Solyc01g112070.3.1	4782	2040.90279242732	4415.63250326528	1.11341263806311	0.00283162052267289	Up	0.000389241115667399	NA	NA	NA	K19073//divinyl chlorophyllide a 8-vinyl-reductase [EC:1.3.1.75];K13506//glycerol-3-phosphate O-acyltransferase 3/4 [EC:2.3.1.15]	gi|460370491|ref|XP_004231086.1|//PREDICTED: uncharacterized protein At1g04910 isoform X3 [Solanum lycopersicum];gi|460370489|ref|XP_004231085.1|//PREDICTED: uncharacterized protein At1g04910 isoform X1 [Solanum lycopersicum]
Solyc10g084380.1.1	1269	17.4687220528737	3.20624609225973	-2.44581700238795	0.0118558234371858	Down	0.00216286259770181	NA	GO:0043565//sequence-specific DNA binding;GO:0003700//transcription factor activity, sequence-specific DNA binding	GO:0010214//seed coat development;GO:0006355//regulation of transcription, DNA-templated	K18835//WRKY transcription factor 2	gi|460408745|ref|XP_004249802.1|//PREDICTED: WRKY transcription factor 44 [Solanum lycopersicum]
Solyc09g065480.2.1	2931	80.8821467558474	35.1770372047782	-1.20118731288115	0.0390887057468026	Down	0.00941628980048071	NA	GO:0016787//hydrolase activity;GO:0046030//inositol trisphosphate phosphatase activity	GO:0046856//phosphatidylinositol dephosphorylation	K20279//synaptojanin [EC:3.1.3.36]	gi|460403417|ref|XP_004247187.1|//PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2 [Solanum lycopersicum]
Solyc10g006690.3.1	3004	110.016974878766	285.833362710872	1.3774481797831	5.35635333288559e-07	Up	2.05750065947185e-08	GO:0016020//membrane	GO:0004672//protein kinase activity;GO:0005488//binding	GO:0006468//protein phosphorylation	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|566154310|ref|XP_006370410.1|//hypothetical protein POPTR_0001s42330g [Populus trichocarpa];gi|747099786|ref|XP_011097953.1|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 [Sesamum indicum]
Solyc04g009900.3.1	1390	1209.2591528898	243.519890016982	-2.31201194010264	1.02039638049736e-14	Down	8.82539296227542e-17	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process	K04515//calcium/calmodulin-dependent protein kinase (CaM kinase) II [EC:2.7.11.17];K08794//calcium/calmodulin-dependent protein kinase I [EC:2.7.11.17]	gi|350539451|ref|NP_001234394.1|//phosphoenolpyruvate carboxylase kinase [Solanum lycopersicum]
Solyc04g014530.1.1	702	23.9319676397632	319.196943384363	3.73743591400171	5.51613845652399e-16	Up	3.92231064064347e-18	NA	NA	NA	K14516//ethylene-responsive transcription factor 1	gi|460381912|ref|XP_004236685.1|//PREDICTED: ethylene-responsive transcription factor 1B-like [Solanum lycopersicum]
Solyc05g054540.3.1	2194	171.531526966006	358.312193704778	1.06274337699725	9.29413332346836e-09	Up	2.47913488575586e-10	NA	NA	NA	K10575//ubiquitin-conjugating enzyme E2 G1 [EC:2.3.2.23]	gi|723701464|ref|XP_010321377.1|//PREDICTED: ubiquitin-conjugating enzyme E2 7-like [Solanum lycopersicum]
Solyc06g066840.3.1	1251	5.05353570504964	19.7843529848648	1.96899485759418	0.00700818746904202	Up	0.00115616636763541	NA	GO:0016701//oxidoreductase activity, acting on single donors with incorporation of molecular oxygen;GO:0046914//transition metal ion binding	GO:0008152//metabolic process	K05282//gibberellin 20-oxidase [EC:1.14.11.12];K04124//gibberellin 3-beta-dioxygenase [EC:1.14.11.15]	gi|460392228|ref|XP_004241719.1|//PREDICTED: probable 2-oxoglutarate-dependent dioxygenase AOP1 [Solanum lycopersicum]
Solyc07g062440.1.1	1791	133.930719896554	55.9055635553545	-1.26042314377026	0.0119589726256041	Down	0.00218466472641578	NA	NA	NA	NA	gi|723718867|ref|XP_010324394.1|//PREDICTED: uncharacterized protein LOC104648569 [Solanum lycopersicum]
Solyc03g044050.2.1	1829	64.786569533764	15.3209520976685	-2.08018881456297	0.00022261031730466	Down	1.9396745480722e-05	NA	NA	NA	K07466//replication factor A1	gi|971580444|ref|XP_015159231.1|//PREDICTED: replication protein A 70 kDa DNA-binding subunit D-like [Solanum tuberosum];gi|970022454|ref|XP_015072525.1|//PREDICTED: replication protein A 70 kDa DNA-binding subunit B-like [Solanum pennellii]
Solyc03g025380.3.1	1035	160.762876171066	50.195209793686	-1.67931269641607	0.000356193683367447	Down	3.3528841075446e-05	NA	GO:0016209//antioxidant activity;GO:0005506//iron ion binding;GO:0003824//catalytic activity	GO:0008152//metabolic process;GO:0006950//response to stress	K00430//peroxidase [EC:1.11.1.7]	gi|460377276|ref|XP_004234419.1|//PREDICTED: peroxidase P7-like [Solanum lycopersicum]
Solyc11g010920.2.1	4425	124.998209670662	43.7666040804884	-1.51400507908596	0.0321842112185758	Down	0.00735170012481015	NA	GO:0000166//nucleotide binding;GO:0003774//motor activity	NA	K10406//kinesin family member C2/C3	gi|460410217|ref|XP_004250527.1|//PREDICTED: kinesin KP1 [Solanum lycopersicum]
Solyc07g055330.3.1	1383	204.174967241663	569.086722538245	1.47884252385846	2.80226762393802e-08	Up	8.19173041309195e-10	NA	NA	NA	K11982//E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27];K19041//E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27]	gi|460395388|ref|XP_004243265.1|//PREDICTED: E3 ubiquitin-protein ligase RNF38-like [Solanum lycopersicum]
Solyc02g089520.2.1	2602	378.758527224013	777.434702115545	1.03744313701938	7.29912709325496e-06	Up	3.89671231953679e-07	NA	NA	NA	K12135//zinc finger protein CONSTANS	gi|460372605|ref|XP_004232119.1|//PREDICTED: zinc finger protein CONSTANS-LIKE 2-like [Solanum lycopersicum]
Solyc02g068470.1.1	468	15.6948266166403	60.1080837099555	1.93726993529462	0.00157973334168467	Up	0.000192622865327314	NA	NA	NA	NA	gi|697136267|ref|XP_009622209.1|//PREDICTED: uncharacterized protein LOC104113674 [Nicotiana tomentosiformis]
Solyc02g083785.1.1	4351	93.9541457264137	202.673507257682	1.10912879021366	0.000133010963327881	Up	1.06739046192013e-05	NA	NA	NA	NA	NA
Solyc11g010580.2.1	1589	14.9054069958837	3.12355474536795	-2.25457504820711	0.0234266359577292	Down	0.00497005508022596	NA	GO:0016741//transferase activity, transferring one-carbon groups	GO:0006730//one-carbon metabolic process	K20298//vacuolar protein sorting-associated protein 52	gi|460409439|ref|XP_004250146.1|//PREDICTED: uncharacterized protein LOC101246201 [Solanum lycopersicum]
Solyc10g050160.2.1	1119	1322.24389585692	499.71827115468	-1.40380144190727	0.000141238907974451	Down	1.14085754485006e-05	NA	GO:0043169//cation binding;GO:0008171//O-methyltransferase activity	GO:0009699//phenylpropanoid biosynthetic process;GO:0006730//one-carbon metabolic process	K00588//caffeoyl-CoA O-methyltransferase [EC:2.1.1.104]	gi|460406614|ref|XP_004248757.1|//PREDICTED: caffeoyl-CoA O-methyltransferase 5 [Solanum lycopersicum]
Solyc04g072070.3.1	931	141.155910558963	514.624541919975	1.86623071998535	6.72219379301605e-16	Up	4.8810511740109e-18	NA	NA	NA	K18835//WRKY transcription factor 2;K10268//F-box and leucine-rich repeat protein 2/20;K13424//WRKY transcription factor 33	gi|460384281|ref|XP_004237841.1|//PREDICTED: probable WRKY transcription factor 51 [Solanum lycopersicum]
Solyc03g119200.3.1	1711	327.109016723595	719.357763159589	1.13693792692651	0.000497078304189586	Up	4.95395194807455e-05	NA	NA	NA	K14759//isochorismate synthase / 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase / 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase / O-succinylbenzoate synthase [EC:5.4.4.2 2.2.1.9 4.2.99.20 4.2.1.113]	gi|460380078|ref|XP_004235785.1|//PREDICTED: L-Ala-D/L-amino acid epimerase [Solanum lycopersicum]
Solyc11g068620.2.1	1090	1212.7273319601	3919.16991571334	1.69229290913933	3.02688688524262e-07	Up	1.09892620175287e-08	NA	NA	NA	K12581//CCR4-NOT transcription complex subunit 7/8;K03094//S-phase kinase-associated protein 1;K13126//polyadenylate-binding protein;K01054//acylglycerol lipase [EC:3.1.1.23]	gi|460411340|ref|XP_004251070.1|//PREDICTED: NAC domain-containing protein 90-like [Solanum lycopersicum]
Solyc03g113900.3.1	2519	286.811073327591	70.5371329673975	-2.02364588262851	8.94037401413966e-11	Down	1.5775152041503e-12	GO:0016020//membrane;GO:0044464//cell part	GO:0046872//metal ion binding;GO:0015924//mannosyl-oligosaccharide mannosidase activity;GO:0005509//calcium ion binding;GO:0004571//mannosyl-oligosaccharide 1,2-alpha-mannosidase activity	GO:0008152//metabolic process	K10084//ER degradation enhancer, mannosidase alpha-like 1	gi|460380804|ref|XP_004236144.1|//PREDICTED: probable alpha-mannosidase I MNS5 [Solanum lycopersicum];gi|698537143|ref|XP_009764735.1|//PREDICTED: probable alpha-mannosidase I MNS5 isoform X2 [Nicotiana sylvestris]
Solyc10g024420.2.1	6432	104.132408697701	321.814087439107	1.62780833902498	7.53413042657807e-05	Up	5.53580012156019e-06	NA	NA	NA	K05665//ATP-binding cassette, subfamily C (CFTR/MRP), member 1	gi|460406162|ref|XP_004248540.1|//PREDICTED: putative ABC transporter C family member 15 isoform X1 [Solanum lycopersicum]
Solyc08g007340.3.1	4607	2245.21886041534	1036.02628585648	-1.11579547620694	2.13624034008789e-05	Down	1.31485673302626e-06	NA	NA	NA	K20353//COPII coat assembly protein SEC16	gi|723719931|ref|XP_010324588.1|//PREDICTED: protein transport protein SEC16B homolog [Solanum lycopersicum]
Solyc07g007260.3.1	1047	55.1358928581182	13.5647476015632	-2.02312959945544	0.0471059089837747	Down	0.0119448392231242	GO:0016020//membrane	GO:0004857//enzyme inhibitor activity	GO:0006508//proteolysis	NA	gi|460394248|ref|XP_004242716.1|//PREDICTED: metallocarboxypeptidase inhibitor-like [Solanum lycopersicum]
Solyc03g117420.3.1	7038	1380.98497724563	3268.25900423871	1.2428246936351	1.64168964356677e-10	Up	3.10055756610429e-12	NA	NA	NA	K10280//F-box and leucine-rich repeat protein 14;K14963//COMPASS component SWD3	gi|970015864|ref|XP_015069015.1|//PREDICTED: internalin-A [Solanum pennellii];gi|460380320|ref|XP_004235905.1|//PREDICTED: putative adenylate cyclase regulatory protein [Solanum lycopersicum]
Solyc01g107400.2.1	589	159.991154522779	355.816407209783	1.15314089227674	0.041822243199053	Up	0.0102258374172553	NA	NA	NA	K14487//auxin responsive GH3 gene family	gi|697127145|ref|XP_009617606.1|//PREDICTED: probable indole-3-acetic acid-amido synthetase GH3.1 [Nicotiana tomentosiformis]
BGI_novel_G000316	2187	123.163501154678	307.670842747294	1.32081294487975	2.54149215275e-05	Up	1.6054045615001e-06	NA	NA	NA	NA	gi|970056497|ref|XP_015054853.1|//PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC107001237 [Solanum pennellii]
Solyc03g013620.1.1	483	170.209686343096	1596.54471175202	3.22956791082774	1.44050396493831e-106	Up	1.08390065081889e-110	GO:0031224//intrinsic component of membrane;GO:0009534//chloroplast thylakoid	GO:0050136//NADH dehydrogenase (quinone) activity;GO:0048037//cofactor binding	GO:0022904//respiratory electron transport chain;GO:0051234//establishment of localization	K05577//NAD(P)H-quinone oxidoreductase subunit 5 [EC:1.6.5.3]	gi|757813385|gb|AJO25150.1|//NADH-plastoquinone oxidoreductase subunit 5 (chloroplast) [Solanum lycopersicum]
Solyc07g065125.1.1	1654	726.536528058567	1578.19904760909	1.11917193509272	8.86395438832748e-12	Up	1.29391057286345e-13	NA	GO:0008889//glycerophosphodiester phosphodiesterase activity	GO:0006629//lipid metabolic process	NA	gi|723718175|ref|XP_010324293.1|//PREDICTED: uncharacterized protein LOC104648549 [Solanum lycopersicum];gi|723718172|ref|XP_010324292.1|//PREDICTED: glycerophosphodiester phosphodiesterase GDPDL4 [Solanum lycopersicum]
Solyc03g120140.3.1	2914	1035.69628316232	201.731457305573	-2.3600930207729	6.56141847107162e-18	Down	3.90031647264603e-20	NA	NA	NA	NA	gi|460379929|ref|XP_004235711.1|//PREDICTED: uncharacterized protein LOC101250783 [Solanum lycopersicum]
Solyc01g104433.1.1	2296	224.749957104184	570.846306979722	1.34478153041197	0.000113986803356681	Up	8.86849922278464e-06	NA	NA	NA	K14297//nuclear pore complex protein Nup98-Nup96	gi|971553928|ref|XP_015165055.1|//PREDICTED: nuclear pore complex protein NUP98B-like isoform X1 [Solanum tuberosum];gi|460371019|ref|XP_004231344.1|//PREDICTED: uncharacterized protein LOC101263064 [Solanum lycopersicum]
Solyc07g047710.3.1	4362	132.357649054306	296.125962696256	1.16176941188784	9.06010806764258e-06	Up	4.98340029905698e-07	NA	GO:0003824//catalytic activity	NA	K08496//golgi SNAP receptor complex member 2	gi|460395985|ref|XP_004243560.1|//PREDICTED: glucan endo-1,3-beta-glucosidase 12-like [Solanum lycopersicum]
Solyc08g016080.3.1	2196	273.820760484313	713.373631480739	1.38142605758298	1.65545358443118e-14	Up	1.49476621619068e-16	NA	NA	NA	K15891//farnesol dehydrogenase [EC:1.1.1.216];K19073//divinyl chlorophyllide a 8-vinyl-reductase [EC:1.3.1.75]	gi|460398492|ref|XP_004244793.1|//PREDICTED: uncharacterized protein LOC101263137 [Solanum lycopersicum]
Solyc09g065800.3.1	1359	20.369936831424	4.53301719622538	-2.16789796713208	0.0308456217291989	Down	0.00696057333076505	NA	NA	NA	K15397//3-ketoacyl-CoA synthase [EC:2.3.1.199]	gi|460403718|ref|XP_004247335.1|//PREDICTED: 3-ketoacyl-CoA synthase 11-like [Solanum lycopersicum]
Solyc02g084260.2.1	4453	12.2662856878005	52.3412452150771	2.09324978941725	0.0354279084963766	Up	0.00831808266360095	NA	NA	NA	K08739//DNA mismatch repair protein MLH3;K03544//ATP-dependent Clp protease ATP-binding subunit ClpX	gi|971539159|ref|XP_015160667.1|//PREDICTED: DNA mismatch repair protein MLH3 isoform X7 [Solanum tuberosum];gi|697118350|ref|XP_009613098.1|//PREDICTED: ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial [Nicotiana tomentosiformis]
Solyc07g042520.3.1	2688	16.9194942590383	54.8307308311239	1.69629825776851	0.0475517613588052	Up	0.0121044099832083	NA	GO:0035251//UDP-glucosyltransferase activity	GO:0005984//disaccharide metabolic process	K00695//sucrose synthase [EC:2.4.1.13]	gi|460396229|ref|XP_004243680.1|//PREDICTED: sucrose synthase-like [Solanum lycopersicum]
Solyc07g017860.3.1	2975	978.573869029428	457.92523623157	-1.09556868479649	7.86447978363394e-10	Down	1.68059613134089e-11	NA	GO:0032559//adenyl ribonucleotide binding;GO:0016405//CoA-ligase activity	NA	K01895//acetyl-CoA synthetase [EC:6.2.1.1]	gi|460394643|ref|XP_004242910.1|//PREDICTED: acetyl-coenzyme A synthetase, chloroplastic/glyoxysomal-like [Solanum lycopersicum]
Solyc07g005765.1.1	525	1051.91389975666	308.958033524648	-1.76753383139005	5.53551961276244e-16	Down	3.95691770663982e-18	NA	GO:0016740//transferase activity	NA	K13065//shikimate O-hydroxycinnamoyltransferase [EC:2.3.1.133]	gi|924183452|ref|NP_001234850.2|//hydroxycinnamoyl CoA quinate transferase [Solanum lycopersicum]
Solyc04g008260.3.1	1273	118.936510417852	308.033243195576	1.37289440317447	4.45601908115807e-08	Up	1.35457615409169e-09	NA	GO:0016791//phosphatase activity	NA	K14379//tartrate-resistant acid phosphatase type 5 [EC:3.1.3.2]	gi|460382376|ref|XP_004236915.1|//PREDICTED: purple acid phosphatase 4 [Solanum lycopersicum]
Solyc04g080670.3.1	2428	209.597247603285	578.371654344217	1.46437707661839	3.72097834737725e-07	Up	1.37051836045234e-08	NA	GO:0005524//ATP binding;GO:0035299//inositol pentakisphosphate 2-kinase activity	GO:0016310//phosphorylation	K10572//inositol-pentakisphosphate 2-kinase [EC:2.7.1.158]	gi|723695850|ref|XP_004238270.2|//PREDICTED: inositol-pentakisphosphate 2-kinase [Solanum lycopersicum]
Solyc02g091140.3.1	1559	482.209380855042	1542.6983886404	1.67772440729169	3.44574656923103e-09	Up	8.19304677108356e-11	NA	NA	NA	K12844//U4/U6 small nuclear ribonucleoprotein PRP31;K18848//indole-3-acetate O-methyltransferase [EC:2.1.1.278]	gi|460372391|ref|XP_004232014.1|//PREDICTED: probable S-adenosylmethionine-dependent methyltransferase At5g38780 [Solanum lycopersicum]
Solyc05g056040.3.1	3847	2138.0878185464	4709.3266251996	1.13919967656739	1.00748234274663e-10	Up	1.79284856327749e-12	GO:0043231//intracellular membrane-bounded organelle	GO:0003676//nucleic acid binding	GO:0009719//response to endogenous stimulus;GO:0006351//transcription, DNA-templated	K14486//auxin response factor	gi|942429581|ref|NP_001303697.1|//auxin response factor 13 isoform 1 [Solanum lycopersicum]
Solyc06g072290.3.1	1259	32.2192647114943	6.71208072478328	-2.26309159812494	0.0233058177627648	Down	0.00494174525624312	NA	GO:0003779//actin binding	NA	K20478//golgin subfamily B member 1	gi|460393093|ref|XP_004242146.1|//PREDICTED: uncharacterized protein LOC101249654 [Solanum lycopersicum]
Solyc09g005170.2.1	1662	22.5178061050843	2.7565637033629	-3.03012342626609	0.000407892818643079	Down	3.93529749857402e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|661889739|emb|CDP06459.1|//unnamed protein product [Coffea canephora]
BGI_novel_G000247	1100	52.5715372880718	126.024595511695	1.26135149619786	0.00526983008211642	Up	0.00081925513397942	NA	NA	NA	NA	gi|971579818|ref|XP_015159068.1|//PREDICTED: uncharacterized protein LOC107058181 [Solanum tuberosum]
Solyc04g077160.1.1	813	245.37488783054	789.422331899757	1.68580972389782	1.59940415455352e-09	Up	3.59835848165164e-11	NA	NA	NA	NA	gi|565380858|ref|XP_006356808.1|//PREDICTED: DNA-directed RNA polymerase subunit delta-like [Solanum tuberosum];gi|723694955|ref|XP_010320271.1|//PREDICTED: uncharacterized protein LOC101250500 [Solanum lycopersicum]
Solyc00g140060.3.1	896	67.4962081268512	8.58177366461123	-2.97545869808305	1.12797326491613e-08	Down	3.05970174569049e-10	NA	NA	NA	K01280//tripeptidyl-peptidase II [EC:3.4.14.10]	gi|723754678|ref|XP_004253466.2|//PREDICTED: tripeptidyl-peptidase 2-like [Solanum lycopersicum]
Solyc09g009140.3.1	3527	273.214983192923	115.866848502123	-1.237568758109	3.44971286252811e-07	Down	1.26541386040817e-08	GO:0015630//microtubule cytoskeleton;GO:0044430//cytoskeletal part	NA	GO:0000226//microtubule cytoskeleton organization	K16570//gamma-tubulin complex component 3	gi|723727976|ref|XP_010325937.1|//PREDICTED: gamma-tubulin complex component 3 [Solanum lycopersicum]
Solyc04g079080.2.1	907	61.4125698785218	130.993638066556	1.09289086580908	0.00250814585154004	Up	0.000335834879068134	NA	GO:0005509//calcium ion binding	NA	K13448//calcium-binding protein CML;K02183//calmodulin	gi|723696633|ref|XP_010320533.1|//PREDICTED: calmodulin-like protein 5 [Solanum lycopersicum]
Solyc02g088170.2.1	1750	33.8606640173534	1.3284401453826	-4.6718051332919	3.92684284907047e-09	Down	9.558567807933e-11	NA	NA	NA	K01074//palmitoyl-protein thioesterase [EC:3.1.2.22];K19090//CRISPR-associated protein Cas5t;K19589//release factor glutamine methyltransferase [EC:2.1.1.297]	gi|723671394|ref|XP_010316250.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g15300 [Solanum lycopersicum]
Solyc07g054670.3.1	4889	21.1571614378185	53.7503897491409	1.34512913539472	0.00503930932898838	Up	0.000777320099655845	NA	GO:0050136//NADH dehydrogenase (quinone) activity;GO:0046872//metal ion binding;GO:0050662//coenzyme binding	GO:0008152//metabolic process	K17871//NADH:ubiquinone reductase (non-electrogenic) [EC:1.6.5.9]	gi|460395486|ref|XP_004243314.1|//PREDICTED: external alternative NAD(P)H-ubiquinone oxidoreductase B3, mitochondrial [Solanum lycopersicum]
Solyc07g053350.3.1	1142	672.49134107929	183.460071805694	-1.87404958229329	2.78911318425123e-18	Down	1.5949781941542e-20	NA	NA	NA	K16573//gamma-tubulin complex component 6	gi|460395673|ref|XP_004243406.1|//PREDICTED: protein trichome birefringence-like 39 [Solanum lycopersicum]
Solyc08g080040.3.1	1311	72.0135650860001	34.1283946679043	-1.07729613591436	0.00769052140740286	Down	0.00129303762865626	NA	GO:0016706//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	GO:0008152//metabolic process	K05277//leucoanthocyanidin dioxygenase [EC:1.14.11.19]	gi|723724617|ref|XP_010325438.1|//PREDICTED: LOW QUALITY PROTEIN: leucoanthocyanidin dioxygenase-like [Solanum lycopersicum]
Solyc05g050325.1.1	702	48.8829448249369	1.42648294304533	-5.09879679783046	2.93920289149235e-11	Down	4.68857045144002e-13	NA	GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0043167//ion binding	GO:0006026//aminoglycan catabolic process	K17525//chitinase domain-containing protein 1	gi|723702561|ref|XP_004240083.2|//PREDICTED: chitinase domain-containing protein 1 isoform X1 [Solanum lycopersicum]
Solyc01g110160.3.1	2272	43.3434019294131	96.1138855248781	1.14893247961193	0.0481746489092886	Up	0.0123082784327682	NA	NA	NA	NA	gi|460370124|ref|XP_004230904.1|//PREDICTED: uncharacterized protein LOC101251520 isoform X1 [Solanum lycopersicum]
Solyc02g080650.3.1	1632	96.4002260788176	1.45845839833397	-6.04652038997261	9.71627662346033e-18	Down	5.99499385345182e-20	NA	NA	NA	K19323//ataxin-10	gi|460373803|ref|XP_004232703.1|//PREDICTED: ataxin-10 [Solanum lycopersicum]
Solyc10g009010.3.1	1680	14.2917298546537	3.13549572219483	-2.188415092756	0.0223033504987605	Down	0.00468387142528523	NA	NA	NA	NA	gi|460405300|ref|XP_004248114.1|//PREDICTED: CBS domain-containing protein CBSX5-like [Solanum lycopersicum]
Solyc10g018260.1.1	1308	80.5670410517125	39.0534127546477	-1.04474114486168	0.0229900564367677	Down	0.00486095248964012	NA	NA	NA	K08679//UDP-glucuronate 4-epimerase [EC:5.1.3.6]	gi|460406211|ref|XP_004248561.1|//PREDICTED: UDP-glucuronate 4-epimerase 3-like [Solanum lycopersicum]
Solyc03g114860.3.1	1376	6060.17134617404	2507.69405893566	-1.27299723653992	2.57386866270122e-06	Down	1.18816284768036e-07	GO:0044459//plasma membrane part;GO:0030312//external encapsulating structure	GO:0035251//UDP-glucosyltransferase activity	GO:0045229//external encapsulating structure organization;GO:0009250//glucan biosynthetic process	K13379//reversibly glycosylated polypeptide / UDP-arabinopyranose mutase [EC:2.4.1.- 5.4.99.30]	gi|460380655|ref|XP_004236070.1|//PREDICTED: alpha-1,4-glucan-protein synthase [UDP-forming] 2-like [Solanum lycopersicum]
Solyc06g075960.1.1	312	2322.42120885148	810.112347220063	-1.51943575071151	0.00680319477682063	Down	0.00111364561602508	GO:0043231//intracellular membrane-bounded organelle;GO:0000785//chromatin	GO:0003676//nucleic acid binding	GO:0034728//nucleosome organization	K11254//histone H4	gi|971575188|ref|XP_006361210.2|//PREDICTED: uncharacterized protein LOC102591967 [Solanum tuberosum]
Solyc08g079855.1.1	605	38.7953753726341	9.88784633783213	-1.97215645696966	0.00252491980751588	Down	0.000338840818412684	NA	GO:0004175//endopeptidase activity;GO:0005515//protein binding	GO:0044092//negative regulation of molecular function;GO:0019538//protein metabolic process	NA	gi|4200338|emb|CAA76726.1|//P69C protein [Solanum lycopersicum]
Solyc06g076700.1.1	1902	147.914239871517	54.4328019852766	-1.44221274169004	0.00592624080146952	Down	0.000944675781633798	NA	NA	NA	NA	gi|460391140|ref|XP_004241181.1|//PREDICTED: UPF0503 protein At3g09070, chloroplastic-like [Solanum lycopersicum]
Solyc09g075360.3.1	2062	343.723165588851	70.171111373235	-2.29229796978143	0.020083533187679	Down	0.00411247464528873	NA	GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds	GO:0044238//primary metabolic process	K01179//endoglucanase [EC:3.2.1.4]	gi|350539021|ref|NP_001234882.1|//endo-1,4-beta-glucanase precursor [Solanum lycopersicum]
Solyc01g102300.3.1	4042	149.746337302407	379.629193872471	1.34207022527893	1.61473695995789e-08	Up	4.50765547136477e-10	NA	NA	NA	K12126//phytochrome-interacting factor 3	gi|723663431|ref|XP_010313958.1|//PREDICTED: transcription factor PIF3 [Solanum lycopersicum]
Solyc07g038130.2.1	1573	23.7032304481602	7.83294161838296	-1.59745758284636	0.0273901005801954	Down	0.00602108192964942	NA	NA	NA	K12309//beta-galactosidase [EC:3.2.1.23]	gi|971549025|ref|XP_015163832.1|//PREDICTED: LOW QUALITY PROTEIN: beta-galactosidase [Solanum tuberosum];gi|955380975|ref|XP_014625552.1|//PREDICTED: beta-galactosidase-like isoform X2 [Glycine max]
Solyc03g025400.3.1	1180	116.370140432017	1.44576463704418	-6.3307444043176	3.16287593105116e-20	Down	1.42793495758518e-22	NA	NA	NA	K19329//WW domain-containing oxidoreductase	gi|460377274|ref|XP_004234418.1|//PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic-like isoform X1 [Solanum lycopersicum]
Solyc06g051210.3.1	2856	960.404280125284	357.253011873276	-1.42669565885678	6.07071831894788e-08	Down	1.90023989517104e-09	NA	NA	NA	K11723//bromodomain-containing protein 7/9	gi|460390608|ref|XP_004240920.1|//PREDICTED: uncharacterized protein LOC101247829 [Solanum lycopersicum]
Solyc10g012000.1.1	555	4.62496992992377	21.8656301790364	2.24114903742303	0.00329857936899964	Up	0.000467981294224893	NA	NA	NA	NA	gi|698525792|ref|XP_009759725.1|//PREDICTED: uncharacterized protein LOC104212207 [Nicotiana sylvestris]
Solyc04g080220.3.1	3926	13.0651985541881	33.7560966914185	1.36941904124516	0.0150607574288786	Up	0.00288749510374587	NA	NA	NA	K11426//SET and MYND domain-containing protein	gi|460385108|ref|XP_004238247.1|//PREDICTED: uncharacterized protein LOC101256279 [Solanum lycopersicum]
Solyc04g081360.3.1	1727	575.478104948145	263.89173559098	-1.12481486971231	5.19529838573982e-09	Down	1.31152942694937e-10	NA	NA	NA	K03256//tRNA (adenine-N(1)-)-methyltransferase non-catalytic subunit	gi|460385320|ref|XP_004238352.1|//PREDICTED: tRNA (adenine(58)-N(1))-methyltransferase non-catalytic subunit trm6 isoform X2 [Solanum lycopersicum]
Solyc09g010915.1.1	492	62.6083656464155	13.0510614932335	-2.26218828950092	0.000808944068712303	Down	8.72856128317112e-05	NA	NA	NA	NA	gi|697168943|ref|XP_009593367.1|//PREDICTED: putative F-box protein At1g47790 isoform X1 [Nicotiana tomentosiformis];gi|697133949|ref|XP_009621024.1|//PREDICTED: F-box/kelch-repeat protein At3g23880-like [Nicotiana tomentosiformis]
Solyc03g026260.3.1	1776	396.885740107481	1105.83812103915	1.47834457788967	4.04645335233065e-10	Up	8.20556191462085e-12	NA	NA	NA	K03781//catalase [EC:1.11.1.6]	gi|723679417|ref|XP_004234352.2|//PREDICTED: traB domain-containing protein isoform X1 [Solanum lycopersicum];gi|723679420|ref|XP_010317569.1|//PREDICTED: traB domain-containing protein isoform X2 [Solanum lycopersicum]
Solyc11g021365.1.1	1082	187.306428031971	666.571472157851	1.83135916326435	1.97385571242452e-17	Up	1.25500983972815e-19	NA	NA	NA	NA	gi|460410016|ref|XP_004250427.1|//PREDICTED: uncharacterized protein LOC101256243 isoform X1 [Solanum lycopersicum]
Solyc08g036625.1.1	1709	2739.55857255836	5938.41905764592	1.11613545466337	2.03639384985799e-06	Up	9.12469930466842e-08	NA	NA	NA	NA	gi|565360153|ref|XP_006346837.1|//PREDICTED: protein TIFY 5A-like [Solanum tuberosum]
Solyc03g096840.3.1	665	1688.39863693135	3608.26581047491	1.09565005196649	1.43621235482981e-09	Up	3.2095942015384e-11	NA	NA	NA	NA	gi|460379214|ref|XP_004235359.1|//PREDICTED: uncharacterized protein LOC101245530 isoform X1 [Solanum lycopersicum]
Solyc01g100900.3.1	1735	16.9654728387475	36.0876153932355	1.08890217615229	0.0466557007103005	Up	0.0117973274820891	NA	NA	NA	K07874//Ras-related protein Rab-1A;K00801//farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21];K01623//fructose-bisphosphate aldolase, class I [EC:4.1.2.13]	gi|460368961|ref|XP_004230333.1|//PREDICTED: WAT1-related protein At1g09380-like [Solanum lycopersicum]
Solyc12g010025.1.1	1958	12253.3243327219	2735.45156172481	-2.1633222917863	1.94557709253617e-07	Down	6.75691486751683e-09	GO:0009536//plastid;GO:0009507//chloroplast	GO:0008237//metallopeptidase activity;GO:0008238//exopeptidase activity;GO:0004177//aminopeptidase activity;GO:0046914//transition metal ion binding;GO:0008235//metalloexopeptidase activity;GO:0030145//manganese ion binding	GO:0006508//proteolysis;GO:0019538//protein metabolic process;GO:0050896//response to stimulus	K01255//leucyl aminopeptidase [EC:3.4.11.1]	gi|1236654|gb|AAC49457.1|//leucine aminopeptidase, partial [Solanum lycopersicum];gi|941355906|ref|NP_001233862.2|//leucine aminopeptidase 1, chloroplastic [Solanum lycopersicum]
Solyc01g079750.3.1	2744	111.141908672603	32.365374315016	-1.77987982716638	0.00839677203817	Down	0.00143295002033754	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process	K20606	gi|460367106|ref|XP_004229416.1|//PREDICTED: mitogen-activated protein kinase kinase kinase NPK1 [Solanum lycopersicum]
Solyc01g068270.3.1	2328	268.394127799163	133.753535737523	-1.00477607786778	0.0362494085485973	Down	0.00856152520456449	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460366596|ref|XP_004229167.1|//PREDICTED: probable receptor-like serine/threonine-protein kinase At5g57670 isoform X1 [Solanum lycopersicum]
Solyc04g082480.3.1	3657	459.530400625882	168.695383281018	-1.4457398157401	9.51839582688335e-06	Down	5.27128617651328e-07	NA	NA	NA	K14833//nucleolar complex protein 2	gi|460385485|ref|XP_004238434.1|//PREDICTED: protein NLP4 isoform X1 [Solanum lycopersicum]
Solyc12g005660.2.1	1503	349.405054279176	108.196530586368	-1.69124623888225	3.82110231808967e-11	Down	6.25349702170431e-13	NA	NA	NA	NA	gi|525314355|ref|NP_001266001.1|//Hop-interacting protein THI121 [Solanum lycopersicum]
Solyc05g015433.1.1	3189	485.905154628237	1302.17135382742	1.42217266426105	2.84648401967592e-11	Up	4.50908271676011e-13	NA	NA	NA	NA	NA
Solyc06g035520.3.1	1520	22.0428877805817	53.4081693659813	1.2767471948785	0.0106647174693909	Up	0.00190825418677287	NA	NA	NA	K14493//gibberellin receptor GID1 [EC:3.-.-.-]	gi|460390244|ref|XP_004240748.1|//PREDICTED: probable carboxylesterase 120 [Solanum lycopersicum]
Solyc02g088430.1.1	1477	8.52729655908682	48.2596180188336	2.5006561603729	0.000162990853095933	Up	1.35457785736988e-05	NA	NA	NA	K10900//werner syndrome ATP-dependent helicase [EC:3.6.4.12]	gi|723671240|ref|XP_010316234.1|//PREDICTED: ATP-dependent DNA helicase Q-like SIM [Solanum lycopersicum];gi|971545745|ref|XP_015162994.1|//PREDICTED: ATP-dependent DNA helicase Q-like SIM isoform X3 [Solanum tuberosum];gi|971545743|ref|XP_015162993.1|//PREDICTED: ATP-dependent DNA helicase Q-like SIM isoform X2 [Solanum tuberosum]
Solyc07g040950.3.1	1010	363.686679543428	934.457121726394	1.36143237999139	2.51153129275834e-13	Up	2.75909382048696e-15	NA	NA	NA	K08234//glyoxylase I family protein	gi|460396355|ref|XP_004243741.1|//PREDICTED: uncharacterized protein LOC101262831 isoform X2 [Solanum lycopersicum]
Solyc09g015280.1.1	436	217.520361137798	468.911361528294	1.10816478367699	0.000459416309318905	Up	4.50774166555194e-05	GO:0009536//plastid;GO:0009507//chloroplast	GO:0003743//translation initiation factor activity	GO:0006413//translational initiation	K02986//small subunit ribosomal protein S4	gi|813424269|ref|YP_009132046.1|//hypothetical chloroplast RF34 (chloroplast) [Solanum neorickii];gi|11465957|ref|NP_054499.1|//hypothetical protein NitaCp023 [Nicotiana tabacum]
Solyc03g093140.3.1	2181	585.754340559163	153.005192149027	-1.93671512896255	3.59888063693691e-05	Down	2.3924838545777e-06	NA	NA	NA	K13783//MFS transporter, OPA family, solute carrier family 37 (glycerol-3-phosphate transporter), member 1/2	gi|460378806|ref|XP_004235159.1|//PREDICTED: putative glycerol-3-phosphate transporter 1 [Solanum lycopersicum]
Solyc02g070480.3.1	292	39.8798379769983	16.4124009607853	-1.28087324306976	0.0476797838500833	Down	0.0121513489766917	NA	NA	NA	K13162//poly(rC)-binding protein 2/3/4	gi|970010156|ref|XP_015065972.1|//PREDICTED: F-box protein At5g46170-like [Solanum pennellii]
Solyc03g116970.2.1	2335	13.6032167979829	37.4326218693435	1.46034825082797	0.0439965879290655	Up	0.0109428684273534	NA	NA	NA	K11267//sister chromatid cohesion protein PDS5	gi|723686412|ref|XP_010318738.1|//PREDICTED: sister chromatid cohesion protein PDS5 homolog B-like [Solanum lycopersicum]
Solyc07g008570.3.1	2370	470.017576202881	99.0856206216929	-2.24596709431298	0.0207947534895409	Down	0.00429586122690252	NA	GO:0046872//metal ion binding;GO:0003993//acid phosphatase activity	GO:0016311//dephosphorylation	K14407//cleavage stimulation factor subunit 2	gi|723712984|ref|XP_010323338.1|//PREDICTED: LOW QUALITY PROTEIN: probable inactive purple acid phosphatase 27 [Solanum lycopersicum];gi|590670162|ref|XP_007037978.1|//Purple acid phosphatase 27 [Theobroma cacao]
Solyc01g095610.3.1	1569	237.428917130384	107.310935251412	-1.14569855773457	0.000213710072447378	Down	1.84925946813005e-05	NA	NA	NA	K16573//gamma-tubulin complex component 6	gi|723661480|ref|XP_010326903.1|//PREDICTED: protein trichome birefringence-like 25 [Solanum lycopersicum]
Solyc04g025610.2.1	1641	199.880458010665	447.671689302409	1.16330365627059	4.34741203395068e-07	Up	1.63068841153079e-08	NA	NA	NA	K08770//ubiquitin C;K18740//exonuclease 3'-5' domain-containing protein 1	gi|971542775|ref|XP_015162251.1|//PREDICTED: ribonuclease D-like isoform X2 [Solanum tuberosum];gi|460378601|ref|XP_004235058.1|//PREDICTED: polyubiquitin-like [Solanum lycopersicum];gi|565403536|ref|XP_006367213.1|//PREDICTED: polyubiquitin-like [Solanum tuberosum]
Solyc09g090970.3.1	1249	1418.12247934271	286.128111406565	-2.30924898847157	1.80434587935122e-13	Down	1.90752893941947e-15	GO:0005634//nucleus;GO:0005737//cytoplasm	GO:0010427//abscisic acid binding;GO:0004864//protein phosphatase inhibitor activity;GO:0004872//receptor activity	GO:0080163//regulation of protein serine/threonine phosphatase activity;GO:0009738//abscisic acid-activated signaling pathway;GO:0006952//defense response;GO:0006950//response to stress;GO:0043086//negative regulation of catalytic activity;GO:0009607//response to biotic stimulus	K14496//abscisic acid receptor PYR/PYL family	gi|568786980|ref|NP_001275580.1|//pathogenesis-related protein STH-2-like [Solanum lycopersicum];gi|806776543|ref|NP_001234352.2|//TSI-1 protein [Solanum lycopersicum]
Solyc05g045900.1.1	504	74.116116985951	164.207582364397	1.14766154150516	0.0134568224092537	Up	0.00251720545593714	GO:0030529//intracellular ribonucleoprotein complex;GO:0009536//plastid	GO:0003723//RNA binding;GO:0005198//structural molecule activity	GO:0010467//gene expression	K02965//small subunit ribosomal protein S19	gi|316996013|dbj|BAD83473.2|//ribosomal protein S19 (mitochondrion) [Nicotiana tabacum]
Solyc06g030470.3.1	2212	829.247864647825	2933.05851151349	1.82253055454724	4.37619271453634e-09	Up	1.08170000506034e-10	NA	NA	NA	NA	gi|460390306|ref|XP_004240776.1|//PREDICTED: protein UPSTREAM OF FLC-like [Solanum lycopersicum]
Solyc03g007240.3.1	3428	6573.71719349733	2674.85483323277	-1.29724879458733	5.05651426145084e-10	Down	1.04059943604726e-11	NA	GO:0016765//transferase activity, transferring alkyl or aryl (other than methyl) groups	GO:0006596//polyamine biosynthetic process	K00797//spermidine synthase [EC:2.5.1.16]	gi|350534638|ref|NP_001234407.1|//SPM1 protein [Solanum lycopersicum]
Solyc03g116430.2.1	3518	893.887194774656	443.413234360352	-1.01144094983567	0.00901094420400528	Down	0.00155945610754042	NA	NA	NA	NA	gi|223524316|gb|EEF27435.1|//conserved hypothetical protein [Ricinus communis]
Solyc01g080830.3.1	1845	379.94804013707	915.788539483832	1.26921237468117	7.30430308934013e-06	Up	3.90222362184461e-07	NA	NA	NA	K03070//preprotein translocase subunit SecA	gi|460367282|ref|XP_004229504.1|//PREDICTED: uncharacterized protein LOC101250337 [Solanum lycopersicum]
Solyc01g087070.3.1	1873	102.253267088788	205.011510932876	1.00355797669277	0.00412385724503474	Up	0.000610821142727682	GO:0031224//intrinsic component of membrane;GO:0043231//intracellular membrane-bounded organelle;GO:0019866//organelle inner membrane	NA	GO:0006810//transport	K05863//solute carrier family 25 (mitochondrial adenine nucleotide translocator), member 4/5/6/31	gi|460367518|ref|XP_004229620.1|//PREDICTED: ADP,ATP carrier protein 1, mitochondrial [Solanum lycopersicum]
Solyc02g062690.3.1	1387	142.751505934647	34.771212977162	-2.03754066437004	0.00720380363742949	Down	0.00119412937646781	NA	NA	NA	K16189//phytochrome-interacting factor 4;K11253//histone H3;K12126//phytochrome-interacting factor 3	gi|460375455|ref|XP_004233521.1|//PREDICTED: transcription factor HBI1 [Solanum lycopersicum]
Solyc05g009990.3.1	2174	46.7094079981646	8.666996518709	-2.43010913008101	0.00867169341869163	Down	0.00148965207485877	NA	NA	NA	K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|460386580|ref|XP_004238976.1|//PREDICTED: piriformospora indica-insensitive protein 2-like [Solanum lycopersicum]
Solyc09g009830.3.1	1151	243.205058552777	797.484110331583	1.71328253734806	4.96177262233117e-09	Up	1.24324325299946e-10	NA	NA	NA	K01674//carbonic anhydrase [EC:4.2.1.1]	gi|723727766|ref|XP_010325903.1|//PREDICTED: alpha carbonic anhydrase 1, chloroplastic [Solanum lycopersicum]
Solyc06g072110.3.1	4281	497.237221261709	1204.8067510839	1.2767955590911	1.56296651656121e-09	Up	3.49873994489813e-11	NA	NA	NA	K02998//small subunit ribosomal protein SAe;K06236//collagen, type I, alpha	gi|460391761|ref|XP_004241487.1|//PREDICTED: uncharacterized protein LOC101251098 [Solanum lycopersicum]
Solyc12g014420.2.1	1786	2567.67735886899	930.167270218746	-1.46490185042954	0.00140364503091716	Down	0.000168616951983389	NA	NA	NA	K19891//glucan endo-1,3-beta-glucosidase 1/2/3 [EC:3.2.1.39]	gi|460413055|ref|XP_004251911.1|//PREDICTED: glucan endo-1,3-beta-glucosidase 13-like [Solanum lycopersicum]
Solyc01g017440.1.1	631	129.454933227002	371.49522201458	1.52089371161772	5.17967548679464e-06	Up	2.61906841770203e-07	GO:0009536//plastid	GO:0016779//nucleotidyltransferase activity;GO:0005488//binding	NA	K03040//DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6]	gi|544163644|ref|YP_008563120.1|//RNA polymerase alpha subunit (chloroplast) [Solanum lycopersicum]
Solyc02g027080.2.1	3078	200.774961770013	76.2964205373327	-1.39589208557538	8.15066353356907e-06	Down	4.42490875806628e-07	NA	NA	NA	K13457//disease resistance protein RPM1	gi|723667885|ref|XP_004231569.2|//PREDICTED: putative late blight resistance protein homolog R1A-3 [Solanum lycopersicum]
Solyc05g051480.2.1	444	253.711801383149	81.8076977496091	-1.63288212178724	2.73589104726691e-05	Down	1.74878814496106e-06	NA	NA	NA	NA	gi|565401467|ref|XP_006366220.1|//PREDICTED: uncharacterized protein LOC102592896 [Solanum tuberosum]
Solyc04g081910.3.1	2109	4358.83734803486	9430.49770702398	1.11339054316822	3.60882116592439e-05	Up	2.40044989516717e-06	NA	GO:0046872//metal ion binding;GO:0004674//protein serine/threonine kinase activity;GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0005509//calcium ion binding	GO:0006464//cellular protein modification process;GO:0006468//protein phosphorylation	K13412//calcium-dependent protein kinase [EC:2.7.11.1]	gi|698507036|ref|XP_009798869.1|//PREDICTED: calcium-dependent protein kinase 29 [Nicotiana sylvestris];gi|460385387|ref|XP_004238385.1|//PREDICTED: calcium-dependent protein kinase 29 [Solanum lycopersicum]
Solyc02g079490.3.1	1899	5.79084089366595	1.17271163149409	-2.30392455873756	0.0205023553183264	Down	0.004223114949881	NA	NA	NA	K13065//shikimate O-hydroxycinnamoyltransferase [EC:2.3.1.133];K15400//omega-hydroxypalmitate O-feruloyl transferase [EC:2.3.1.188]	gi|460373945|ref|XP_004232772.1|//PREDICTED: shikimate O-hydroxycinnamoyltransferase [Solanum lycopersicum]
Solyc11g044840.2.1	1902	1031.05303802136	345.4472861943	-1.57758106444708	2.31387052586535e-08	Down	6.65085433318709e-10	NA	NA	NA	K10206//LL-diaminopimelate aminotransferase [EC:2.6.1.83]	gi|460410685|ref|XP_004250752.1|//PREDICTED: aminotransferase ALD1 [Solanum lycopersicum]
Solyc04g081550.3.1	1398	2643.32380191236	383.225954886236	-2.78608598364275	5.91126515993336e-25	Down	1.44556898192501e-27	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K12173//BRCA1-A complex subunit BRE	gi|460385348|ref|XP_004238366.1|//PREDICTED: thaumatin-like protein 1b [Solanum lycopersicum]
Solyc03g115050.3.1	2880	148.438897665614	46.0552664883434	-1.6884311472808	0.0380602487090892	Down	0.00909837548147301	GO:0043231//intracellular membrane-bounded organelle;GO:0005634//nucleus	GO:0003677//DNA binding;GO:0003676//nucleic acid binding	GO:0006281//DNA repair;GO:0006260//DNA replication;GO:0006259//DNA metabolic process;GO:0006310//DNA recombination	K07466//replication factor A1	gi|460380621|ref|XP_004236053.1|//PREDICTED: replication protein A 70 kDa DNA-binding subunit B [Solanum lycopersicum]
Solyc12g009770.1.1	3129	373.322660858564	967.65430021658	1.37406864530556	0.00923229242194282	Up	0.00160575198896319	NA	NA	NA	K13466//EIX receptor 1/2;K10406//kinesin family member C2/C3	gi|723747984|ref|XP_010313803.1|//PREDICTED: receptor-like protein 12 [Solanum lycopersicum]
Solyc03g123680.1.1	723	1045.21753184918	240.690952313194	-2.11854941251601	7.84175551617497e-15	Down	6.63805489518197e-17	NA	GO:0046872//metal ion binding	NA	K16286//E3 ubiquitin-protein ligase EL5 [EC:2.3.2.27]	gi|460379545|ref|XP_004235522.1|//PREDICTED: RING-H2 finger protein ATL3-like [Solanum lycopersicum]
Solyc08g078060.3.1	2575	4645.60238062765	11927.790324933	1.36038921867962	5.13338591472035e-13	Up	6.12220968760854e-15	NA	NA	NA	K09838//zeaxanthin epoxidase [EC:1.14.13.90]	gi|460400583|ref|XP_004245813.1|//PREDICTED: LOW QUALITY PROTEIN: zeaxanthin epoxidase, chloroplastic-like [Solanum lycopersicum]
Solyc03g078000.3.1	2248	800.258146598533	1665.38321015333	1.05731682082846	0.00150819923787171	Up	0.000182595378008696	GO:0031224//intrinsic component of membrane;GO:0005887//integral component of plasma membrane;GO:0009941//chloroplast envelope	GO:0005355//glucose transmembrane transporter activity;GO:0005351//sugar:proton symporter activity;GO:0022857//transmembrane transporter activity	GO:0071702//organic substance transport;GO:0046323//glucose import;GO:1904659//glucose transmembrane transport;GO:0015992//proton transport	K08150//MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13	gi|663071095|ref|NP_001287653.1|//vacuolar glucose transporter 1 [Solanum lycopersicum];gi|698453395|ref|XP_009779936.1|//PREDICTED: D-xylose-proton symporter-like 3, chloroplastic isoform X1 [Nicotiana sylvestris]
Solyc07g065120.3.1	3336	1211.95650263583	2435.32919219011	1.00677887863436	9.41664670812011e-14	Up	9.35287709158657e-16	NA	GO:0008081//phosphoric diester hydrolase activity	GO:0019400//alditol metabolic process	K01126//glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]	gi|723718172|ref|XP_010324292.1|//PREDICTED: glycerophosphodiester phosphodiesterase GDPDL4 [Solanum lycopersicum]
Solyc07g056600.1.1	330	30.2053567443999	104.344815855558	1.78848259419365	5.3382688972042e-06	Up	2.70126849764471e-07	NA	NA	GO:0006950//response to stress	NA	gi|460396419|ref|XP_004243771.1|//PREDICTED: uncharacterized protein LOC101248796 [Solanum lycopersicum]
Solyc04g009980.3.1	1550	28.9853579731226	6.76754367015043	-2.09862010608131	0.00772528450728387	Down	0.0012994637709581	NA	NA	NA	NA	gi|460382115|ref|XP_004236785.1|//PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 1-like [Solanum lycopersicum]
Solyc06g062400.2.1	4012	32.4781253715472	65.0055903211462	1.00109542874142	0.0172614391134273	Up	0.00342371358186564	NA	NA	NA	NA	gi|460393346|ref|XP_004242271.1|//PREDICTED: protein CHUP1, chloroplastic-like isoform X1 [Solanum lycopersicum]
Solyc06g083270.3.1	1368	498.173723229868	161.215230643858	-1.62766087946501	1.13245116835167e-07	Down	3.74927399604765e-09	GO:0031224//intrinsic component of membrane	GO:0005048//signal sequence binding;GO:0004871//signal transducer activity	GO:0035437//maintenance of protein localization in endoplasmic reticulum	K10949//ER lumen protein retaining receptor	gi|460393644|ref|XP_004242419.1|//PREDICTED: putative ER lumen protein-retaining receptor C28H8.4 [Solanum lycopersicum]
Solyc02g080540.1.1	1453	2442.2119909528	4939.94808027778	1.01630744311418	2.92026097358886e-05	Up	1.89080855362921e-06	GO:0045261//proton-transporting ATP synthase complex, catalytic core F(1);GO:0033178//proton-transporting two-sector ATPase complex, catalytic domain;GO:0009534//chloroplast thylakoid	GO:0032559//adenyl ribonucleotide binding;GO:0019829//cation-transporting ATPase activity;GO:0015078//hydrogen ion transmembrane transporter activity;GO:0046933//proton-transporting ATP synthase activity, rotational mechanism;GO:0046961//proton-transporting ATPase activity, rotational mechanism	GO:0006754//ATP biosynthetic process;GO:0015986//ATP synthesis coupled proton transport;GO:0006818//hydrogen transport	K02115//F-type H+-transporting ATPase subunit gamma	gi|460373820|ref|XP_004232711.1|//PREDICTED: ATP synthase gamma chain, chloroplastic [Solanum lycopersicum];gi|970010004|ref|XP_015065901.1|//PREDICTED: ATP synthase gamma chain, chloroplastic [Solanum pennellii]
Solyc01g091450.3.1	2375	27.0648077034581	60.2160037801181	1.1537288294645	0.0417364013476504	Up	0.0101985675979304	NA	NA	NA	K17710//pentatricopeptide repeat domain-containing protein 1	gi|460367924|ref|XP_004229820.1|//PREDICTED: pentatricopeptide repeat-containing protein At1g01970 [Solanum lycopersicum]
Solyc10g051080.1.1	782	165.354110735013	494.205881539521	1.57955326861771	5.28283272774692e-09	Up	1.3376021165439e-10	GO:0005634//nucleus	GO:0003677//DNA binding	GO:0006355//regulation of transcription, DNA-templated	NA	gi|970056721|ref|XP_015054988.1|//PREDICTED: NAC domain-containing protein 100-like [Solanum pennellii]
Solyc09g082760.3.1	1936	2547.63349001526	807.635553237962	-1.65738141558763	0.000229342750724356	Down	2.00955329735525e-05	NA	NA	NA	K08245//phytepsin [EC:3.4.23.40]	gi|460404275|ref|XP_004247609.1|//PREDICTED: cyprosin [Solanum lycopersicum]
Solyc05g009040.3.1	2314	1528.81155788858	3540.0624529895	1.21136422192298	1.99002903165907e-06	Up	8.89448641689606e-08	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|970028694|ref|XP_015075673.1|//PREDICTED: probable receptor-like protein kinase At1g67000 [Solanum pennellii]
Solyc01g103670.3.1	2281	657.464720258463	281.324980218979	-1.22467581878165	0.00364270656490839	Down	0.000528041700323251	NA	NA	NA	K13696//abhydrolase domain-containing protein 1/3	gi|460369216|ref|XP_004230459.1|//PREDICTED: embryogenesis-associated protein EMB8 [Solanum lycopersicum]
Solyc06g052010.2.1	1782	39.7879982222913	11.0111801934043	-1.85336421006804	0.00232231147400319	Down	0.000305884592569043	NA	NA	NA	NA	gi|460390687|ref|XP_004240959.1|//PREDICTED: protein IQ-DOMAIN 1 isoform X2 [Solanum lycopersicum]
Solyc07g054220.1.1	1173	791.804807855292	314.543440713578	-1.33188555003324	5.2978844669474e-08	Down	1.62843175677051e-09	NA	NA	NA	K09286//EREBP-like factor	gi|460395537|ref|XP_004243339.1|//PREDICTED: ethylene-responsive transcription factor ERF054 [Solanum lycopersicum]
Solyc07g008300.2.1	1658	12.0662574751168	49.1502945785116	2.02622179060581	0.0196780848556064	Up	0.00400965039796706	NA	GO:0051537//2 iron, 2 sulfur cluster binding;GO:0016708//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor;GO:0005506//iron ion binding;GO:0046914//transition metal ion binding;GO:0003824//catalytic activity;GO:0004497//monooxygenase activity;GO:0051536//iron-sulfur cluster binding	GO:0019439//aromatic compound catabolic process;GO:0044237//cellular metabolic process;GO:0055114//oxidation-reduction process	K00499//choline monooxygenase [EC:1.14.15.7]	gi|460394913|ref|XP_004243034.1|//PREDICTED: choline monooxygenase, chloroplastic-like [Solanum lycopersicum];gi|460394388|ref|XP_004242785.1|//PREDICTED: choline monooxygenase, chloroplastic-like isoform X2 [Solanum lycopersicum]
Solyc11g011873.1.1	2099	360.342222550041	180.142010234787	-1.00023304134107	0.00762062753600673	Down	0.00127841904375673	NA	GO:0004672//protein kinase activity	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460409616|ref|XP_004250234.1|//PREDICTED: putative receptor-like protein kinase At4g00960 [Solanum lycopersicum]
Solyc03g083440.3.1	3930	7440.69234729258	993.150973253538	-2.90535191861811	1.40985611023947e-20	Down	6.09982891939577e-23	NA	GO:0045181//glutamate synthase activity, NAD(P)H as acceptor;GO:0000166//nucleotide binding;GO:0046914//transition metal ion binding;GO:0050662//coenzyme binding;GO:0051540//metal cluster binding	GO:0006536//glutamate metabolic process	K00264//glutamate synthase (NADPH/NADH) [EC:1.4.1.13 1.4.1.14]	gi|723682114|ref|XP_010318008.1|//PREDICTED: glutamate synthase 1 [NADH], chloroplastic isoform X2 [Solanum lycopersicum];gi|460378389|ref|XP_004234955.1|//PREDICTED: glutamate synthase 1 [NADH], chloroplastic isoform X1 [Solanum lycopersicum];gi|971556168|ref|XP_015165627.1|//PREDICTED: glutamate synthase 1 [NADH], chloroplastic isoform X1 [Solanum tuberosum]
Solyc11g071600.2.1	4673	646.886897576719	1867.2427254921	1.5293240807229	0.00269265930964774	Up	0.000365808606739578	NA	GO:0016623//oxidoreductase activity, acting on the aldehyde or oxo group of donors, oxygen as acceptor;GO:0046914//transition metal ion binding;GO:0051536//iron-sulfur cluster binding;GO:0050662//coenzyme binding	GO:0009850//auxin metabolic process	K09842//abscisic-aldehyde oxidase [EC:1.2.3.14]	gi|350535553|ref|NP_001234456.1|//aldehyde oxidase [Solanum lycopersicum]
BGI_novel_G000039	13509	381.927993228685	151.902023712137	-1.33015957522706	0.00646527204675649	Down	0.00104932970691149	NA	NA	NA	K01303//acylaminoacyl-peptidase [EC:3.4.19.1];K09493//T-complex protein 1 subunit alpha;K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|971586942|ref|XP_015160938.1|//PREDICTED: uncharacterized protein LOC107059054 [Solanum tuberosum]
Solyc05g007950.3.1	834	166.009309872931	49.3979470339111	-1.74874116066413	4.39264112568728e-05	Down	2.97800575940123e-06	GO:0044421//extracellular region part;GO:0030312//external encapsulating structure	GO:0016892//endoribonuclease activity, producing 3'-phosphomonoesters;GO:0003676//nucleic acid binding	GO:0050896//response to stimulus	K01166//ribonuclease T2 [EC:3.1.27.1]	gi|350535451|ref|NP_001234195.1|//extracellular ribonuclease LE precursor [Solanum lycopersicum]
Solyc10g083210.2.1	1686	627.397914021888	188.330545563292	-1.73611372108763	9.85713578426413e-11	Down	1.74669336131994e-12	NA	NA	NA	K09287//RAV-like factor	gi|460407980|ref|XP_004249426.1|//PREDICTED: B3 domain-containing protein At2g36080-like [Solanum lycopersicum]
Solyc06g062845.1.1	1569	72.2248594542474	21.651406202675	-1.73803476408861	0.0209329917785221	Down	0.00432978541434323	GO:0009536//plastid	GO:0016838//carbon-oxygen lyase activity, acting on phosphates;GO:0048037//cofactor binding	GO:0006566//threonine metabolic process	K01733//threonine synthase [EC:4.2.3.1]	gi|460392573|ref|XP_004241890.1|//PREDICTED: threonine synthase, chloroplastic-like [Solanum lycopersicum]
Solyc06g011374.1.1	1666	28.8496490552212	88.4824066167192	1.61683685655108	0.00229472760695945	Up	0.000301560704706899	NA	NA	NA	NA	gi|460389916|ref|XP_004240591.1|//PREDICTED: coiled-coil domain-containing protein 93 isoform X1 [Solanum lycopersicum];gi|970031709|ref|XP_015077147.1|//PREDICTED: coiled-coil domain-containing protein 93 isoform X6 [Solanum pennellii];gi|723704633|ref|XP_010321895.1|//PREDICTED: coiled-coil domain-containing protein 93 isoform X2 [Solanum lycopersicum];gi|971565570|ref|XP_015168057.1|//PREDICTED: coiled-coil domain-containing protein 93 isoform X3 [Solanum tuberosum]
Solyc12g056550.1.1	1137	595.01001668671	223.581020481954	-1.41211623088187	0.00416656782980242	Down	0.000617795467440155	NA	NA	NA	NA	gi|460414453|ref|XP_004252585.1|//PREDICTED: uncharacterized protein LOC101257050 [Solanum lycopersicum]
Solyc04g008385.1.1	5301	264.263446012482	642.893800022874	1.28260355828185	0.00743091549868032	Up	0.00123988375608154	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460382923|ref|XP_004237185.1|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 isoform X1 [Solanum lycopersicum];gi|971563862|ref|XP_015167606.1|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At1g11330 [Solanum tuberosum]
Solyc10g008040.3.1	2490	9.67577181106708	34.6796441705155	1.84164044492677	0.00745915921177091	Up	0.00124571887663849	NA	NA	NA	K20254//perilipin-4;K01835//phosphoglucomutase [EC:5.4.2.2]	gi|460406041|ref|XP_004248482.1|//PREDICTED: seed biotin-containing protein SBP65-like isoform X1 [Solanum lycopersicum]
Solyc05g010320.3.1	1077	180.115289028796	63.4255183274177	-1.50578533967575	0.00810342439864762	Down	0.00137404566458634	NA	GO:0016872//intramolecular lyase activity	GO:0009699//phenylpropanoid biosynthetic process;GO:0006575//cellular modified amino acid metabolic process	K01859//chalcone isomerase [EC:5.5.1.6]	gi|565363784|ref|XP_006348611.1|//PREDICTED: chalcone--flavonone isomerase B-like [Solanum tuberosum];gi|460386617|ref|XP_004238994.1|//PREDICTED: chalcone--flavonone isomerase [Solanum lycopersicum]
Solyc10g038080.2.1	2133	1182.14878598798	383.991797226349	-1.62226422768741	1.44870027665697e-06	Down	6.25153956856866e-08	GO:0044424//intracellular part	GO:0016616//oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;GO:0016836//hydro-lyase activity;GO:0005488//binding	GO:0008652//cellular amino acid biosynthetic process	K13832//3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25]	gi|723735375|ref|XP_010327280.1|//PREDICTED: bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic-like [Solanum lycopersicum]
Solyc11g011190.1.1	1047	1713.32013015812	855.556844813416	-1.00185912265825	0.000128350051782608	Down	1.0241928511321e-05	NA	NA	NA	K18789//xylogalacturonan beta-1,3-xylosyltransferase [EC:2.4.2.41];K01930//folylpolyglutamate synthase [EC:6.3.2.17]	gi|460409516|ref|XP_004250184.1|//PREDICTED: probable glycosyltransferase At5g11130 [Solanum lycopersicum]
Solyc04g082710.3.1	1285	426.948554379837	192.440078739155	-1.1496529464162	0.0255785867002299	Down	0.00552951689915429	NA	NA	NA	K16290//xylem cysteine proteinase [EC:3.4.22.-]	gi|460385525|ref|XP_004238454.1|//PREDICTED: xylem cysteine proteinase 1 [Solanum lycopersicum]
Solyc06g063200.2.1	3388	339.709838596935	963.034510256339	1.50328449602531	1.98770215400291e-05	Up	1.20623159308002e-06	NA	NA	NA	K05387//glutamate receptor, ionotropic, plant	gi|460393330|ref|XP_004242263.1|//PREDICTED: glutamate receptor 2.9-like isoform X1 [Solanum lycopersicum];gi|723709995|ref|XP_010322806.1|//PREDICTED: glutamate receptor 2.8-like isoform X2 [Solanum lycopersicum]
Solyc10g085120.2.1	3162	9.82951570754423	25.8366420816498	1.39422633606372	0.0481201378557499	Up	0.0122834889146449	NA	NA	NA	K13428//LRR receptor-like serine/threonine-protein kinase EFR [EC:2.7.11.1];K20181//vacuolar protein sorting-associated protein 18	gi|460408779|ref|XP_004249819.1|//PREDICTED: putative receptor-like protein kinase At3g47110 [Solanum lycopersicum]
Solyc08g081040.3.1	1337	205.899928055241	92.078644558353	-1.16100482429061	0.000715870316431677	Down	7.56269318487641e-05	NA	NA	NA	NA	gi|460400169|ref|XP_004245608.1|//PREDICTED: uncharacterized protein LOC101259063 [Solanum lycopersicum]
Solyc01g111590.3.1	2268	233.981759999177	111.315960781061	-1.07173560419547	0.0171938380961065	Down	0.00340448344243072	NA	GO:0004468//lysine N-acetyltransferase activity, acting on acetyl phosphate as donor	NA	K10752//histone-binding protein RBBP4	gi|460370405|ref|XP_004231043.1|//PREDICTED: WD-40 repeat-containing protein MSI2-like [Solanum lycopersicum]
Solyc02g092950.3.1	1106	71.8692060520912	19.0460147157526	-1.91588459601327	0.0250071867846617	Down	0.00537133247364438	NA	GO:0015631//tubulin binding	NA	K10436//microtubule-associated protein, RP/EB family	gi|460372120|ref|XP_004231880.1|//PREDICTED: microtubule-associated protein RP/EB family member 1C [Solanum lycopersicum]
Solyc03g095700.1.1	426	44.0958493571382	15.2798214873032	-1.52901517593912	0.0141539411916337	Down	0.00267444651464358	NA	NA	NA	NA	gi|723683358|ref|XP_010318229.1|//PREDICTED: uncharacterized protein LOC104646455 [Solanum lycopersicum]
Solyc06g082780.3.1	1472	1489.8980448447	3775.70701929006	1.3415332122594	1.88603480022456e-06	Up	8.38710735088573e-08	NA	NA	NA	K20858	gi|460393742|ref|XP_004242468.1|//PREDICTED: mitochondrial calcium uniporter regulatory subunit MCUb-like [Solanum lycopersicum]
Solyc07g061740.3.1	2156	84.1452935125933	182.027983532371	1.11320577106207	0.000509077298309425	Up	5.09651877652889e-05	NA	NA	NA	K15502//serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A	gi|460397532|ref|XP_004244321.1|//PREDICTED: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit B [Solanum lycopersicum]
Solyc12g011030.2.1	1586	134.592281086521	318.508545550687	1.24273640709132	2.207546097525e-05	Up	1.36705074361405e-06	GO:0030312//external encapsulating structure;GO:0005576//extracellular region	GO:0016758//transferase activity, transferring hexosyl groups;GO:0016798//hydrolase activity, acting on glycosyl bonds	GO:0044042//glucan metabolic process	K08235//xyloglucan:xyloglucosyl transferase [EC:2.4.1.207]	gi|849602898|ref|NP_001296988.1|//brassinosteroid-regulated protein BRU1-like precursor [Solanum lycopersicum]
Solyc04g011900.3.1	3431	541.209074215747	1086.6000612886	1.00556309982928	2.44722569217613e-05	Up	1.53851242089234e-06	NA	NA	NA	K13457//disease resistance protein RPM1	gi|970022231|ref|XP_015072398.1|//PREDICTED: putative late blight resistance protein homolog R1B-14 [Solanum pennellii];gi|460381968|ref|XP_004236712.1|//PREDICTED: uncharacterized protein LOC101250205 [Solanum lycopersicum]
Solyc07g044910.1.1	156	1.35150073178476	24.4111703679454	4.17490726712858	6.01446970651279e-07	Up	2.33518914112912e-08	NA	NA	NA	NA	NA
BGI_novel_G000508	2805	35.4497279444935	8.18568718725247	-2.1145991147482	0.00372370707025479	Down	0.000542305119223337	NA	NA	NA	NA	gi|970045521|ref|XP_015084213.1|//PREDICTED: uncharacterized protein LOC107027600 [Solanum pennellii]
Solyc01g057685.1.1	2527	23.6501214327233	51.2269466168159	1.11505531131516	0.0267549944460816	Up	0.00585200585966619	NA	NA	NA	K07466//replication factor A1	gi|970066756|ref|XP_015060416.1|//PREDICTED: uncharacterized protein LOC107006356 [Solanum pennellii]
Solyc01g007960.3.1	2394	181.955942531954	1.884643526777	-6.59315368999538	2.95583264409171e-21	Down	1.10093089452626e-23	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460366034|ref|XP_004228898.1|//PREDICTED: cysteine-rich receptor-like protein kinase 2 isoform X1 [Solanum lycopersicum]
Solyc09g008780.3.1	2576	4137.70229181009	510.41757618919	-3.01907993268468	2.63127477552461e-25	Down	6.13766125216426e-28	NA	NA	NA	NA	gi|460402164|ref|XP_004246584.1|//PREDICTED: uncharacterized protein LOC101249675 [Solanum lycopersicum]
Solyc06g051130.1.1	1305	40.5754258636797	15.8591420801561	-1.35529150802551	0.0147852056062232	Down	0.00281899281166109	NA	NA	NA	K15400//omega-hydroxypalmitate O-feruloyl transferase [EC:2.3.1.188];K19861//benzyl alcohol O-benzoyltransferase [EC:2.3.1.196 2.3.1.232]	gi|723706091|ref|XP_004240917.2|//PREDICTED: omega-hydroxypalmitate O-feruloyl transferase [Solanum lycopersicum]
Solyc07g041155.1.1	2088	776.809379853244	351.32360868913	-1.1447600933143	0.000366090400522004	Down	3.47083449704834e-05	NA	NA	NA	K10357//myosin V	gi|723716977|ref|XP_010324023.1|//PREDICTED: myosin-17-like [Solanum lycopersicum]
Solyc10g006660.3.1	1093	3533.01030050364	1510.32984409008	-1.22603429827282	2.83461827827852e-18	Down	1.63166514889621e-20	NA	GO:0046872//metal ion binding	NA	K16465//centrin-1;K10840//centrin-2	gi|460405842|ref|XP_004248383.1|//PREDICTED: calcium-binding protein PBP1-like [Solanum lycopersicum]
Solyc03g044300.3.1	1733	189.433994512382	88.9243890523685	-1.0910441875796	0.000222669904990332	Down	1.94103148932506e-05	GO:0043231//intracellular membrane-bounded organelle;GO:0005634//nucleus	GO:0003677//DNA binding;GO:0003700//transcription factor activity, sequence-specific DNA binding;GO:0001071//nucleic acid binding transcription factor activity;GO:0003676//nucleic acid binding	GO:0048316//seed development;GO:0048481//plant ovule development;GO:0006355//regulation of transcription, DNA-templated;GO:0006351//transcription, DNA-templated;GO:0010093//specification of floral organ identity;GO:0010073//meristem maintenance	K09284//AP2-like factor, euAP2 lineage	gi|350535469|ref|NP_001234452.1|//APETALA2-like protein [Solanum lycopersicum]
Solyc04g077390.3.1	3336	896.57868779999	1946.24253950515	1.11818939785564	0.00018352882868956	Up	1.5549545606053e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460384719|ref|XP_004238057.1|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 [Solanum lycopersicum]
Solyc11g006540.2.1	1835	3519.30876063225	781.560966617975	-2.17086177014575	4.10521167598417e-12	Down	5.66821928173887e-14	NA	GO:0003824//catalytic activity;GO:0050662//coenzyme binding	GO:0008152//metabolic process	K01008//selenide, water dikinase [EC:2.7.9.3];K17871//NADH:ubiquinone reductase (non-electrogenic) [EC:1.6.5.9]	gi|460409029|ref|XP_004249943.1|//PREDICTED: apoptosis-inducing factor homolog A-like [Solanum lycopersicum]
Solyc09g092270.3.1	1657	1718.43378756997	3546.71793566272	1.0453903350425	0.034340784674984	Up	0.00799992997394661	NA	NA	NA	K13065//shikimate O-hydroxycinnamoyltransferase [EC:2.3.1.133]	gi|460404820|ref|XP_004247878.1|//PREDICTED: protein ECERIFERUM 26-like [Solanum lycopersicum]
Solyc08g078760.1.1	2640	41.5364413741506	99.4252837682622	1.25923515572749	0.00976319105524033	Up	0.0017153537331818	NA	NA	NA	NA	gi|460400473|ref|XP_004245759.1|//PREDICTED: uncharacterized protein LOC101253408 [Solanum lycopersicum]
Solyc04g079210.3.1	1195	178.343280684478	583.021383144478	1.70889193589076	1.13372154938038e-10	Up	2.05161800320528e-12	NA	NA	GO:0008152//metabolic process	NA	gi|723696639|ref|XP_010320535.1|//PREDICTED: patatin-like protein 2 [Solanum lycopersicum];gi|970021762|ref|XP_015072153.1|//PREDICTED: patatin-like protein 2 [Solanum pennellii]
Solyc04g081300.3.1	1969	172.49021601526	58.7358956747863	-1.55420016952119	0.0035996744679632	Down	0.000520584975728011	GO:0016021//integral component of membrane	GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0008810//cellulase activity	GO:0044238//primary metabolic process;GO:0030245//cellulose catabolic process	K01179//endoglucanase [EC:3.2.1.4]	gi|460385306|ref|XP_004238345.1|//PREDICTED: endoglucanase 2-like [Solanum lycopersicum]
Solyc08g077020.1.1	372	2686.13324997696	5813.27398430148	1.1138200317981	0.001649608795399	Up	0.000202818718711962	NA	NA	NA	NA	gi|460400736|ref|XP_004245888.1|//PREDICTED: uncharacterized protein LOC101266965 [Solanum lycopersicum]
Solyc02g030460.2.1	1286	39.1107428869047	6.58824869692253	-2.56959801865477	0.00828718420211637	Down	0.00140997428465178	NA	NA	NA	NA	gi|723667952|ref|XP_010315652.1|//PREDICTED: uncharacterized protein LOC101256819 [Solanum lycopersicum]
Solyc07g055470.3.1	1948	245.74764997826	887.36048387007	1.85234268767028	7.02066222851052e-11	Up	1.21237169408816e-12	NA	NA	NA	K07428//cytochrome P450, family 4, subfamily X [EC:1.14.14.1];K07426//cytochrome P450, family 4, subfamily B, polypeptide 1 [EC:1.14.14.1]	gi|460395378|ref|XP_004243260.1|//PREDICTED: cytochrome P450 CYP72A219 [Solanum lycopersicum]
Solyc07g063260.3.1	5105	237.880180811337	543.009733618357	1.19074298160747	8.46206174093014e-10	Up	1.8210305928563e-11	NA	NA	NA	K08472//mlo protein	gi|460397324|ref|XP_004244217.1|//PREDICTED: MLO-like protein 11 [Solanum lycopersicum]
Solyc01g104570.3.1	1593	220.51144560966	85.8987639293541	-1.3601442641156	2.7597012056311e-07	Down	9.92578763199146e-09	NA	NA	NA	K11547//kinetochore protein NDC80	gi|460369420|ref|XP_004230560.1|//PREDICTED: kinetochore protein NDC80 homolog [Solanum lycopersicum]
Solyc11g069590.2.1	2268	73.087932987667	25.1485053504174	-1.53916057407381	0.000970207759648588	Down	0.000108445720613843	GO:0010008//endosome membrane;GO:0016021//integral component of membrane;GO:0005886//plasma membrane	GO:0005524//ATP binding;GO:0004674//protein serine/threonine kinase activity;GO:0051020//GTPase binding	GO:0010089//xylem development;GO:0006468//protein phosphorylation	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460411503|ref|XP_004251150.1|//PREDICTED: receptor-like serine/threonine-protein kinase NCRK [Solanum lycopersicum]
Solyc10g086380.1.1	1542	36.9809950370692	95.8077174997502	1.37335782911265	0.00122487820628328	Up	0.000142579878489108	NA	NA	NA	K14494//DELLA protein	gi|723739916|ref|XP_004249633.2|//PREDICTED: DELLA protein GAI-like [Solanum lycopersicum]
BGI_novel_G000233	1949	1.90521072581934	209.574716676159	6.78137029301576	1.95968614851838e-27	Up	3.61266445738905e-30	NA	NA	NA	NA	gi|970056132|ref|XP_015089713.1|//PREDICTED: uncharacterized protein LOC107032636 [Solanum pennellii]
Solyc03g121900.1.1	321	590.869304751048	114.60767583397	-2.36613538221524	0.0167792343776034	Down	0.00329903231216536	NA	NA	NA	NA	gi|723684874|ref|XP_010318493.1|//PREDICTED: putative lipid-transfer protein DIR1 [Solanum lycopersicum]
Solyc11g012510.2.1	2096	3036.17703471257	1296.08595102295	-1.22809451956481	0.000106542224606779	Down	8.21313085851352e-06	NA	NA	NA	K14494//DELLA protein	gi|902763359|ref|NP_001234305.2|//GRAS1 protein [Solanum lycopersicum]
Solyc08g061900.1.1	279	39.8949538760701	84.7541030788385	1.08707693474719	0.0294279301377073	Up	0.00657312344723732	GO:0031224//intrinsic component of membrane;GO:0009534//chloroplast thylakoid	GO:0050136//NADH dehydrogenase (quinone) activity;GO:0048037//cofactor binding	GO:0022904//respiratory electron transport chain;GO:0051234//establishment of localization	K05573//NAD(P)H-quinone oxidoreductase subunit 2 [EC:1.6.5.3]	gi|408903554|gb|AFU96374.1|//NdhB, partial (chloroplast) [Irvingia malayana]
Solyc05g014120.1.1	744	302.859948568563	130.174289793183	-1.21820626721462	0.00363288249672275	Down	0.000526344262410809	NA	GO:0016741//transferase activity, transferring one-carbon groups	GO:0006730//one-carbon metabolic process	NA	gi|460386972|ref|XP_004239166.1|//PREDICTED: uncharacterized protein LOC101254202 [Solanum lycopersicum]
Solyc02g070530.3.1	2930	226.117440102096	464.824968632218	1.03961529761794	0.000208748731899556	Up	1.79965513133127e-05	GO:0031224//intrinsic component of membrane	GO:0005267//potassium channel activity	GO:0030001//metal ion transport	K05391//cyclic nucleotide gated channel, other eukaryote;K04908//potassium voltage-gated channel Eag-related subfamily H member 5	gi|460374640|ref|XP_004233118.1|//PREDICTED: potassium channel KAT1-like [Solanum lycopersicum]
Solyc02g082100.3.1	4953	330.140543581086	1027.83745308618	1.6384599005287	2.00896241777133e-16	Up	1.39070385579355e-18	NA	NA	NA	K01931//protein neuralized [EC:2.3.2.27]	gi|460373606|ref|XP_004232606.1|//PREDICTED: uncharacterized protein LOC101246588 isoform X2 [Solanum lycopersicum]
Solyc07g005380.3.1	869	114.070614350239	47.3718805729337	-1.26782433744744	0.0389836780758075	Down	0.00938218918927541	NA	NA	NA	NA	gi|460393960|ref|XP_004242575.1|//PREDICTED: S-norcoclaurine synthase-like [Solanum lycopersicum]
Solyc08g007930.2.1	940	92.1561117680716	20.203557969919	-2.18947046541176	7.09701897451989e-06	Down	3.76478433185593e-07	NA	NA	NA	K14411//RNA-binding protein Musashi	gi|970046488|ref|XP_015084753.1|//PREDICTED: protein IQ-DOMAIN 31-like [Solanum pennellii]
Solyc01g007955.1.1	2021	791.616953019077	392.897247961549	-1.01065044650591	0.00172425213461584	Down	0.000214100717118858	NA	NA	NA	K07393//putative glutathione S-transferase	gi|460365325|ref|XP_004228553.1|//PREDICTED: uncharacterized protein LOC101251117 [Solanum lycopersicum];gi|969997675|ref|XP_015068905.1|//PREDICTED: lipase-like [Solanum pennellii]
Solyc02g077050.3.1	1258	1007.39193375048	2506.95063890008	1.31530850581589	3.29824574887736e-09	Up	7.79269499734757e-11	NA	NA	NA	K16292//KDEL-tailed cysteine endopeptidase [EC:3.4.22.-];K01365//cathepsin L [EC:3.4.22.15]	gi|460374325|ref|XP_004232961.1|//PREDICTED: zingipain-2-like [Solanum lycopersicum]
Solyc07g043390.3.1	2280	1228.18036491589	299.188389078827	-2.0373963505927	0.0306101389602305	Down	0.00688209896261615	NA	NA	NA	K10999//cellulose synthase A [EC:2.4.1.12]	gi|460396147|ref|XP_004243640.1|//PREDICTED: cellulose synthase-like protein G2 [Solanum lycopersicum]
Solyc07g052610.3.1	800	41.1458550647463	145.469225679401	1.82189497081908	1.51025342979632e-05	Up	8.84106221506049e-07	NA	NA	NA	K01647//citrate synthase [EC:2.3.3.1]	gi|460395770|ref|XP_004243454.1|//PREDICTED: cyclin-U1-1 [Solanum lycopersicum]
Solyc02g082360.3.1	1034	38.571950612053	79.0238190735694	1.03473546479088	0.0262613586813343	Up	0.00571762538332887	GO:0005730//nucleolus;GO:0005737//cytoplasm	GO:0043022//ribosome binding;GO:0003743//translation initiation factor activity;GO:0043023//ribosomal large subunit binding	GO:0006413//translational initiation;GO:0042256//mature ribosome assembly;GO:0042273//ribosomal large subunit biogenesis	K03264//translation initiation factor 6	gi|723673315|ref|XP_010316489.1|//PREDICTED: eukaryotic translation initiation factor 6-2-like isoform X3 [Solanum lycopersicum];gi|971581959|ref|XP_015159631.1|//PREDICTED: eukaryotic translation initiation factor 6-2-like [Solanum tuberosum];gi|460373568|ref|XP_004232588.1|//PREDICTED: eukaryotic translation initiation factor 6-2-like isoform X1 [Solanum lycopersicum];gi|970005731|ref|XP_015063706.1|//PREDICTED: eukaryotic translation initiation factor 6-2-like [Solanum pennellii]
Solyc12g009440.2.1	649	2658.71295817806	5338.04847273802	1.00558437773566	5.79123659480478e-05	Up	4.11138579924629e-06	NA	GO:0005515//protein binding	NA	NA	gi|460412661|ref|XP_004251716.1|//PREDICTED: uncharacterized protein LOC101257241 [Solanum lycopersicum]
BGI_novel_G000049	1182	4.38831037722232	18.1997618553621	2.05218209916084	0.0417264988807692	Up	0.0101930081727929	NA	NA	NA	NA	gi|971580892|ref|XP_015159351.1|//PREDICTED: uncharacterized protein LOC107058319 [Solanum tuberosum]
Solyc11g051160.2.1	2529	670.572069891497	1701.5775018151	1.34340856371997	7.94827032013713e-06	Up	4.29409939041269e-07	NA	NA	NA	K19996//phosphatidylinositol transfer protein SFH5	gi|460410883|ref|XP_004250845.1|//PREDICTED: patellin-3-like [Solanum lycopersicum]
Solyc09g083090.3.1	1305	150.559294940011	46.2818251433066	-1.70181411317442	0.000316177441859123	Down	2.91554142210952e-05	NA	NA	NA	K12761//carbon catabolite-derepressing protein kinase [EC:2.7.11.1]	gi|460404314|ref|XP_004247628.1|//PREDICTED: CBL-interacting serine/threonine-protein kinase 7-like [Solanum lycopersicum]
Solyc06g005940.3.1	2357	14820.5965397982	3037.38668621008	-2.28670102517918	6.14540336083291e-21	Down	2.54324443074349e-23	NA	GO:0003824//catalytic activity	NA	K09580//protein disulfide-isomerase A1 [EC:5.3.4.1]	gi|460389504|ref|XP_004240392.1|//PREDICTED: protein disulfide-isomerase-like [Solanum lycopersicum]
Solyc03g025670.3.1	889	976.531722561383	1972.61168547528	1.01436816933789	0.0101612825497427	Up	0.00179952457939275	NA	NA	NA	NA	gi|460377235|ref|XP_004234399.1|//PREDICTED: uncharacterized protein LOC101252465 [Solanum lycopersicum]
Solyc11g012720.2.1	1761	173.735367873025	69.5258953369814	-1.32126915459311	0.00108175150424386	Down	0.000123134592351415	NA	NA	NA	NA	gi|460410286|ref|XP_004250561.1|//PREDICTED: trihelix transcription factor GT-2 [Solanum lycopersicum]
Solyc09g064440.3.1	7418	7464.84510559829	1295.97753696031	-2.52607161260671	9.2368167622668e-20	Down	4.51763047063463e-22	NA	NA	NA	K05666//ATP-binding cassette, subfamily C (CFTR/MRP), member 2;K05665//ATP-binding cassette, subfamily C (CFTR/MRP), member 1	gi|460403294|ref|XP_004247127.1|//PREDICTED: ABC transporter C family member 5 [Solanum lycopersicum]
Solyc01g091190.3.1	2400	8472.16813505854	2988.92582273948	-1.50310412715665	2.36171111690035e-12	Down	3.1098528627356e-14	GO:0009536//plastid	GO:0016765//transferase activity, transferring alkyl or aryl (other than methyl) groups	GO:0008652//cellular amino acid biosynthetic process;GO:0006950//response to stress	K00800//3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]	gi|822092669|ref|NP_001295876.1|//3-phosphoshikimate 1-carboxyvinyltransferase, chloroplastic [Solanum lycopersicum]
Solyc10g039290.2.1	4853	257.742638682732	107.775248133222	-1.25790533969448	9.31867172763674e-05	Down	7.07840414525906e-06	NA	NA	NA	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460406127|ref|XP_004248524.1|//PREDICTED: protein NRT1/ PTR FAMILY 4.5 [Solanum lycopersicum]
Solyc08g080640.2.1	744	862.432522435778	220.614981221084	-1.9668808205006	2.78323878338225e-06	Down	1.29633168315547e-07	GO:0043231//intracellular membrane-bounded organelle	NA	GO:0006952//defense response;GO:0001906//cell killing	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|806776583|ref|NP_001292922.1|//protein NP24 precursor [Solanum lycopersicum]
Solyc08g008630.3.1	1279	1286.79017732761	3598.74778618671	1.4837181679196	3.4476228160225e-09	Up	8.21047871535832e-11	NA	NA	NA	K17911//beta-carotene isomerase [EC:5.2.1.14]	gi|460398215|ref|XP_004244658.1|//PREDICTED: beta-carotene isomerase D27, chloroplastic [Solanum lycopersicum]
Solyc12g009550.1.1	878	1851.36495314872	5302.02755415704	1.51795485107015	2.56845025480498e-09	Up	5.97179178882423e-11	NA	NA	NA	K10406//kinesin family member C2/C3;K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|970067161|ref|XP_015060661.1|//PREDICTED: receptor-like protein 12 [Solanum pennellii];gi|970064679|ref|XP_015059311.1|//PREDICTED: receptor-like protein 12 [Solanum pennellii]
Solyc08g007890.3.1	1423	19.015610794079	42.8714754642282	1.17283378974798	0.0282786351108365	Up	0.0062557702953995	NA	NA	NA	K00128//aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]	gi|565379092|ref|XP_006355977.1|//PREDICTED: aldehyde dehydrogenase family 2 member B7, mitochondrial-like [Solanum tuberosum]
Solyc04g051800.3.1	2815	1401.60723861074	3802.67111575076	1.43993103811928	6.03989091710028e-19	Up	3.20400533977103e-21	NA	GO:0032559//adenyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity	GO:0009207//purine ribonucleoside triphosphate catabolic process	K06185//ATP-binding cassette, subfamily F, member 2	gi|460383504|ref|XP_004237462.1|//PREDICTED: ABC transporter F family member 5 [Solanum lycopersicum]
Solyc10g074570.2.1	2339	3261.14837277819	1545.87923038109	-1.07695246584887	5.89989662523538e-08	Down	1.83789104804172e-09	GO:0016020//membrane	GO:0046872//metal ion binding;GO:0004674//protein serine/threonine kinase activity;GO:0032559//adenyl ribonucleotide binding	GO:0006464//cellular protein modification process	K13412//calcium-dependent protein kinase [EC:2.7.11.1]	gi|460407122|ref|XP_004249005.1|//PREDICTED: calcium-dependent protein kinase 4 [Solanum lycopersicum]
Solyc02g084167.1.1	4607	176.569775803142	1391.25321709561	2.97807470661137	7.83276931706949e-20	Up	3.74251957587594e-22	NA	NA	NA	K08739//DNA mismatch repair protein MLH3	gi|723672638|ref|XP_010316420.1|//PREDICTED: uncharacterized protein LOC104645760 [Solanum lycopersicum];gi|971539165|ref|XP_015160674.1|//PREDICTED: DNA mismatch repair protein MLH3 isoform X9 [Solanum tuberosum]
Solyc12g013650.2.1	1071	166.854091604306	361.609878014594	1.11584702326957	1.29404270562007e-06	Up	5.51112243326532e-08	NA	NA	NA	NA	gi|460412930|ref|XP_004251849.1|//PREDICTED: uncharacterized protein LOC101247189 [Solanum lycopersicum]
Solyc04g080750.3.1	1292	66.6036690953115	153.723538364768	1.20666452895612	0.0208506610369608	Up	0.0043097641737044	NA	NA	NA	NA	gi|460385201|ref|XP_004238293.1|//PREDICTED: transmembrane protein 136 [Solanum lycopersicum]
Solyc01g108920.3.1	3900	340.12850447952	157.711583627688	-1.10879128887838	5.47792094706642e-05	Down	3.85597821367994e-06	NA	NA	NA	K17925//sorting nexin-13	gi|460369979|ref|XP_004230834.1|//PREDICTED: uncharacterized protein LOC101255541 [Solanum lycopersicum]
Solyc03g113840.2.1	1687	5.47726417778441	19.5153897045792	1.83308490157471	0.0161681642106752	Up	0.00315090634354016	NA	NA	NA	K01205//alpha-N-acetylglucosaminidase [EC:3.2.1.50]	gi|970000125|ref|XP_015086573.1|//PREDICTED: bax inhibitor 1-like [Solanum pennellii]
Solyc03g025730.3.1	1409	112.115483061271	44.5743449198132	-1.33070002620109	0.00408142435912334	Down	0.000603921821084728	GO:0015630//microtubule cytoskeleton;GO:0043234//protein complex	GO:0032561//guanyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity	GO:0006970//response to osmotic stress;GO:0007017//microtubule-based process;GO:0009207//purine ribonucleoside triphosphate catabolic process;GO:0043623//cellular protein complex assembly	K07375//tubulin beta	gi|565373477|ref|XP_006353299.1|//PREDICTED: tubulin beta-1 chain [Solanum tuberosum]
Solyc10g076780.1.1	1248	290.232893027276	142.302180743062	-1.02825326298845	7.3152112071559e-06	Down	3.91080328268192e-07	NA	NA	NA	K01988//lactosylceramide 4-alpha-galactosyltransferase [EC:2.4.1.228]	gi|460407277|ref|XP_004249080.1|//PREDICTED: lactosylceramide 4-alpha-galactosyltransferase-like [Solanum lycopersicum]
Solyc01g104930.2.1	978	45.1640012662951	130.477114160253	1.53055156734682	6.93713400540051e-06	Up	3.64604070938469e-07	NA	NA	NA	K06027//vesicle-fusing ATPase [EC:3.6.4.6]	gi|970003235|ref|XP_015062393.1|//PREDICTED: vesicle-fusing ATPase [Solanum pennellii]
Solyc02g081485.1.1	1749	147.139342550167	337.729729211691	1.19868613030849	0.000722383087008386	Up	7.64508511570576e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|723678160|ref|XP_010317309.1|//PREDICTED: uncharacterized protein LOC101250956 [Solanum lycopersicum];gi|970009658|ref|XP_015065719.1|//PREDICTED: probable receptor-like protein kinase At5g39020 isoform X2 [Solanum pennellii]
Solyc11g073020.2.1	1120	300.918713919071	147.967950259915	-1.02408910653582	0.00886015892941835	Down	0.00152871202813767	NA	NA	NA	K14292//trimethylguanosine synthase [EC:2.1.1.-];K07213//copper chaperone	gi|460411825|ref|XP_004251305.1|//PREDICTED: uncharacterized protein LOC101261297 [Solanum lycopersicum]
Solyc02g083590.3.1	1893	6720.83837651745	2728.27452435595	-1.30065239163489	4.64494259309333e-09	Down	1.15861434884156e-10	GO:0044424//intracellular part	GO:0016838//carbon-oxygen lyase activity, acting on phosphates	GO:0008652//cellular amino acid biosynthetic process	K01735//3-dehydroquinate synthase [EC:4.2.3.4]	gi|350539107|ref|NP_001233863.1|//3-dehydroquinate synthase, chloroplastic [Solanum lycopersicum]
Solyc03g118820.3.1	1196	52.9634259478623	170.779516169146	1.68906659272601	0.00335516080783331	Up	0.000478280823960889	NA	GO:0032561//guanyl ribonucleotide binding	GO:0006810//transport;GO:0035556//intracellular signal transduction	K07976//Rab family, other;K07904//Ras-related protein Rab-11A	gi|723685851|ref|XP_010318643.1|//PREDICTED: ras-related protein RABA6a-like [Solanum lycopersicum]
Solyc05g007610.2.1	5695	54.8219560046703	16.4960793885011	-1.73263062241371	0.0361667931968689	Down	0.00853280512180456	NA	NA	NA	K13453;K13457//disease resistance protein RPM1	gi|723697447|ref|XP_004239388.2|//PREDICTED: putative late blight resistance protein homolog R1B-23 isoform X1 [Solanum lycopersicum]
Solyc06g053230.3.1	1654	1188.10155668325	579.230648478665	-1.03644831426648	9.35755605179903e-06	Down	5.17165155759698e-07	NA	NA	NA	K07441//beta-1,4-N-acetylglucosaminyltransferase [EC:2.4.1.141]	gi|460390724|ref|XP_004240975.1|//PREDICTED: uncharacterized protein LOC101264014 [Solanum lycopersicum]
Solyc05g056000.3.1	1366	1442.976725935	3352.2379947189	1.21607654742403	3.29904918736534e-13	Up	3.74835535960998e-15	NA	NA	NA	K01054//acylglycerol lipase [EC:3.1.1.23]	gi|460388041|ref|XP_004239680.1|//PREDICTED: caffeoylshikimate esterase [Solanum lycopersicum]
Solyc01g111145.1.1	1698	2033.79344039137	769.737863140595	-1.40173404133903	3.79515914585516e-05	Down	2.53010609723677e-06	NA	NA	NA	K02184//formin 2	gi|723666256|ref|XP_010315362.1|//PREDICTED: proline-rich protein 4-like isoform X2 [Solanum lycopersicum]
Solyc08g074683.1.1	1791	381.86439543075	97.8963824786562	-1.96373295644929	0.0486361891929266	Down	0.0124579238887796	GO:0009534//chloroplast thylakoid	GO:0043169//cation binding;GO:0016682//oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor	GO:0008152//metabolic process	K00422//polyphenol oxidase [EC:1.10.3.1]	gi|824556527|ref|NP_001296326.1|//polyphenol oxidase B, chloroplastic [Solanum lycopersicum]
Solyc00g007220.3.1	1035	37.4792286222054	12.475612758718	-1.58698058304461	0.00807204026413008	Down	0.00136659823884821	NA	NA	NA	K19040//E3 ubiquitin-protein ligase ATL10/75/76/77/78 [EC:2.3.2.27]	gi|460415807|ref|XP_004253245.1|//PREDICTED: RING-H2 finger protein ATL80-like [Solanum lycopersicum]
Solyc03g044630.2.1	976	18.0150497665482	99.596063750074	2.46688608780649	5.65819384630836e-05	Up	3.99564704647133e-06	NA	NA	NA	NA	gi|723680833|ref|XP_004234729.2|//PREDICTED: uncharacterized protein LOC101249245 [Solanum lycopersicum]
Solyc04g076780.3.1	2824	2758.17858883826	1308.13691678498	-1.07620232357792	0.00135086023718053	Down	0.000160903819071239	NA	NA	GO:0006810//transport	NA	gi|460384660|ref|XP_004238028.1|//PREDICTED: oligopeptide transporter 4-like [Solanum lycopersicum]
Solyc01g066457.1.1	1276	508.682865517306	123.223070180069	-2.04549411238882	6.75525460396508e-06	Down	3.54028204037748e-07	NA	NA	NA	K01259//proline iminopeptidase [EC:3.4.11.5];K08726//soluble epoxide hydrolase / lipid-phosphate phosphatase [EC:3.3.2.10 3.1.3.76];K10144//RING finger and CHY zinc finger domain-containing protein 1 [EC:2.3.2.27]	gi|723658279|ref|XP_004229258.2|//PREDICTED: bifunctional epoxide hydrolase 2-like [Solanum lycopersicum]
Solyc02g086530.3.1	3407	390.656265677241	828.402797926917	1.08443267271791	0.000168361956827163	Up	1.40681680253246e-05	NA	GO:0008378//galactosyltransferase activity	NA	K06617//raffinose synthase [EC:2.4.1.82]	gi|460373017|ref|XP_004232319.1|//PREDICTED: galactinol--sucrose galactosyltransferase-like [Solanum lycopersicum]
Solyc04g006990.3.1	1321	35.1332626815227	9.62583766555611	-1.86785356156869	0.0350084490090214	Down	0.00820419973202386	NA	NA	NA	NA	gi|460382560|ref|XP_004237007.1|//PREDICTED: transcription factor bHLH30-like [Solanum lycopersicum]
BGI_novel_G000335	2697	899.101361617135	3478.48994165295	1.95190547450347	5.25908367055524e-12	Up	7.38012870247218e-14	NA	NA	NA	NA	gi|565353569|ref|XP_006343702.1|//PREDICTED: uncharacterized protein LOC102605937 [Solanum tuberosum]
Solyc11g066530.2.1	931	2.76349986319603	67.3778894384832	4.60770679158881	3.72506650130681e-13	Up	4.31648037021255e-15	NA	NA	NA	K13106//pre-mRNA-splicing factor CWC26	gi|970018841|ref|XP_015070602.1|//PREDICTED: BUD13 homolog isoform X1 [Solanum pennellii]
Solyc10g078580.1.1	183	17.9360627472745	72.8493979225987	2.02205381854827	4.48602161553079e-05	Up	3.05312757806441e-06	NA	NA	NA	NA	gi|970056954|ref|XP_015055121.1|//PREDICTED: arabinogalactan peptide 14-like [Solanum pennellii]
Solyc07g005760.3.1	1801	7997.60485725517	2747.22818187335	-1.54159125864037	7.37867942277653e-12	Down	1.06599431841467e-13	NA	GO:0016746//transferase activity, transferring acyl groups	NA	K13065//shikimate O-hydroxycinnamoyltransferase [EC:2.3.1.133]	gi|924183452|ref|NP_001234850.2|//hydroxycinnamoyl CoA quinate transferase [Solanum lycopersicum]
Solyc10g050110.1.1	1329	115.688648861896	50.1324282178805	-1.20643129764123	0.00360032019475233	Down	0.000520813812973014	NA	NA	NA	K02984//small subunit ribosomal protein S3Ae;K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|460406616|ref|XP_004248758.1|//PREDICTED: uncharacterized protein At4g06744-like [Solanum lycopersicum]
Solyc03g033390.3.1	1514	505.269505955301	239.791761343373	-1.075271020855	1.61188647148407e-05	Down	9.53305317220829e-07	NA	NA	NA	NA	gi|460377491|ref|XP_004234526.1|//PREDICTED: F-box protein At4g35930 [Solanum lycopersicum]
Solyc07g064050.3.1	1688	24.0839641026337	6.46113960246874	-1.898212320137	0.0146848654991615	Down	0.00279167138326799	NA	GO:0016740//transferase activity	NA	K20867	gi|460397204|ref|XP_004244158.1|//PREDICTED: probable galacturonosyltransferase 12 [Solanum lycopersicum]
Solyc01g107680.3.1	958	21.5378344385962	95.6112419005068	2.15030706048367	7.5805502742719e-05	Up	5.58131560825813e-06	NA	NA	NA	K17263//cullin-associated NEDD8-dissociated protein 1	gi|970001497|ref|XP_015058072.1|//PREDICTED: cullin-associated NEDD8-dissociated protein 1 [Solanum pennellii]
Solyc10g084670.2.1	1842	195.455438364073	83.5157098944145	-1.22672021747534	0.00715263963557849	Down	0.00118430274778709	GO:0016282//eukaryotic 43S preinitiation complex;GO:0033290//eukaryotic 48S preinitiation complex;GO:0005852//eukaryotic translation initiation factor 3 complex	GO:0003743//translation initiation factor activity	GO:0006446//regulation of translational initiation;GO:0001731//formation of translation preinitiation complex	K03254//translation initiation factor 3 subunit A	gi|970052119|ref|XP_015087658.1|//PREDICTED: eukaryotic translation initiation factor 3 subunit A [Solanum pennellii];gi|723739441|ref|XP_010312283.1|//PREDICTED: eukaryotic translation initiation factor 3 subunit A-like [Solanum lycopersicum]
Solyc02g088290.3.1	5551	612.186450770207	204.344551832303	-1.58296733553185	0.00269560496599696	Down	0.000366666360851534	NA	NA	NA	K18443//golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1	gi|723671346|ref|XP_010316243.1|//PREDICTED: LOW QUALITY PROTEIN: ARF guanine-nucleotide exchange factor GNOM-like [Solanum lycopersicum]
Solyc08g067330.1.1	297	20.8647957626684	4.7058324888702	-2.1485489269865	0.0317912686573698	Down	0.00724214190069127	GO:0031224//intrinsic component of membrane;GO:0009521//photosystem;GO:0009534//chloroplast thylakoid	GO:0043169//cation binding;GO:0046906//tetrapyrrole binding	GO:0006464//cellular protein modification process;GO:0006091//generation of precursor metabolites and energy	K08912//light-harvesting complex II chlorophyll a/b binding protein 1	gi|970047137|ref|XP_015085083.1|//PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like [Solanum pennellii]
Solyc02g083460.3.1	1966	5170.6246225514	12602.8118988894	1.28533518228353	9.59345245430824e-16	Up	7.07417863447861e-18	NA	GO:0008233//peptidase activity	NA	K00924	gi|460373420|ref|XP_004232517.1|//PREDICTED: aspartic proteinase-like protein 1 isoform X2 [Solanum lycopersicum]
Solyc04g073980.3.1	2202	4.15710407448054	17.2659275970479	2.0542770719421	0.0277692608789267	Up	0.00612219220280325	NA	NA	NA	K17943//pumilio RNA-binding family	gi|723694273|ref|XP_004238523.2|//PREDICTED: pumilio homolog 2-like [Solanum lycopersicum]
Solyc03g119930.1.1	1377	107.437847550836	236.874946195454	1.14062330889833	4.75205407888789e-06	Up	2.37423920871449e-07	NA	NA	GO:0006810//transport	NA	gi|460379959|ref|XP_004235726.1|//PREDICTED: molybdate transporter 2 [Solanum lycopersicum]
Solyc03g078370.1.1	2370	356.288106163844	828.158265480112	1.21686217751013	2.82389964501245e-07	Up	1.01937565683339e-08	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460378629|ref|XP_004235071.1|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Solanum lycopersicum]
Solyc06g062770.3.1	429	179.116694456763	370.087296887733	1.04696580744612	0.00273734838613185	Up	0.000373321591411887	NA	NA	NA	NA	gi|723710161|ref|XP_010322841.1|//PREDICTED: uncharacterized protein LOC101257574 [Solanum lycopersicum]
Solyc11g072980.1.1	1395	11.5743909671954	3.07923417441651	-1.9102927893251	0.0469180053858835	Down	0.0118901310865053	GO:0043231//intracellular membrane-bounded organelle	GO:0016747//transferase activity, transferring acyl groups other than amino-acyl groups	GO:0009314//response to radiation;GO:0006631//fatty acid metabolic process;GO:0006950//response to stress	K15397//3-ketoacyl-CoA synthase [EC:2.3.1.199]	gi|460411818|ref|XP_004251302.1|//PREDICTED: 3-ketoacyl-CoA synthase 3-like [Solanum lycopersicum]
Solyc08g080375.1.1	1178	24.3039338453349	57.7214816912611	1.24791848582667	0.0139378059917108	Up	0.00262448152703207	NA	NA	NA	K07418;K20562//null;K20618//null;K07408//cytochrome P450, family 1, subfamily A, polypeptide 1 [EC:1.14.14.1]	gi|460400245|ref|XP_004245646.1|//PREDICTED: probable (S)-N-methylcoclaurine 3'-hydroxylase isozyme 2 [Solanum lycopersicum]
Solyc11g071730.2.1	5163	1788.05427291031	3603.55409106995	1.01102997366261	0.000876995259794799	Up	9.63036524529642e-05	NA	NA	NA	K10400//kinesin family member 15	gi|723746195|ref|XP_010313480.1|//PREDICTED: phragmoplast orienting kinesin 2 [Solanum lycopersicum]
Solyc08g080540.3.1	1535	4462.82428264118	1184.14072740224	-1.91411645759081	2.56340917446724e-25	Down	5.78647669179963e-28	NA	NA	NA	K09419//heat shock transcription factor, other eukaryote	gi|460400227|ref|XP_004245637.1|//PREDICTED: heat stress transcription factor B-2b [Solanum lycopersicum]
Solyc04g007140.1.1	309	20.8827346649643	63.4676100284883	1.6037098666291	0.00785621237844316	Up	0.00132414715784144	NA	NA	NA	NA	gi|661875986|emb|CDP19774.1|//unnamed protein product [Coffea canephora]
Solyc04g080790.3.1	2704	2040.12396999368	957.637880640803	-1.09110469529531	0.000385181371997969	Down	3.68081521773831e-05	GO:0005634//nucleus	GO:0003677//DNA binding	GO:0006355//regulation of transcription, DNA-templated	K16670//homeobox protein Meis2;K15613//homeobox protein Meis1	gi|460385145|ref|XP_004238265.1|//PREDICTED: BEL1-like homeodomain protein 3 [Solanum lycopersicum]
Solyc11g010710.2.1	2613	291.562491282524	54.4811661858656	-2.41997564271151	4.3000467795111e-06	Down	2.11928565882601e-07	NA	NA	NA	K09285//AP2-like factor, ANT lineage	gi|723741666|ref|XP_004250153.2|//PREDICTED: AP2-like ethylene-responsive transcription factor AIL6 [Solanum lycopersicum]
Solyc04g011440.4.1	2523	1294.89547648837	393.573549101952	-1.71813047893043	1.29494427154395e-13	Down	1.32027801951998e-15	NA	NA	NA	K03283//heat shock 70kDa protein 1/8	gi|525314141|ref|NP_001266213.1|//heat shock protein 70-3 [Solanum lycopersicum]
Solyc05g005280.3.1	2373	53.001532642532	142.243911668111	1.42426091981095	2.58897897151521e-05	Up	1.63832303615071e-06	NA	NA	NA	K13459//disease resistance protein RPS2	gi|460385938|ref|XP_004238657.1|//PREDICTED: probable inactive poly [ADP-ribose] polymerase SRO2 [Solanum lycopersicum]
Solyc06g071180.3.1	980	322.970540475737	128.976592179817	-1.32429332027003	1.1505784707901e-06	Down	4.83519996942264e-08	NA	NA	NA	K10418//dynein light chain LC8-type	gi|460391900|ref|XP_004241556.1|//PREDICTED: uncharacterized protein LOC101246933 [Solanum lycopersicum]
Solyc03g082670.3.1	966	98.8123037634462	37.1625337865268	-1.41084182258202	0.000743760763611917	Down	7.91050292976257e-05	NA	NA	NA	NA	gi|460378477|ref|XP_004234997.1|//PREDICTED: F-box protein SKIP31-like [Solanum lycopersicum]
Solyc08g081230.1.1	1392	4424.87405987949	957.857582796085	-2.20775332130948	7.78383328154529e-25	Down	1.99134937225387e-27	GO:0005887//integral component of plasma membrane	GO:0005267//potassium channel activity	GO:0030001//metal ion transport	NA	gi|460400137|ref|XP_004245592.1|//PREDICTED: BTB/POZ domain-containing protein At5g41330-like [Solanum lycopersicum]
Solyc02g088450.3.1	411	2.29916847411814	18.9423886939057	3.04243418047265	0.00055867028659383	Up	5.68128587156931e-05	NA	NA	NA	NA	gi|970007339|ref|XP_015064552.1|//PREDICTED: uncharacterized protein LOC107009712 isoform X1 [Solanum pennellii]
Solyc10g084690.2.1	2056	661.841469725031	221.675066227377	-1.57803918445732	2.50749190544588e-07	Down	8.88659659492107e-09	NA	NA	NA	K12492//ADP-ribosylation factor GTPase-activating protein 1	gi|460408192|ref|XP_004249530.1|//PREDICTED: probable ADP-ribosylation factor GTPase-activating protein AGD6 [Solanum lycopersicum]
Solyc06g008210.3.1	2400	171.517702657667	77.4272474234433	-1.14744422763026	5.80649286794696e-05	Down	4.12658578914666e-06	NA	NA	NA	K10683//BRCA1-associated RING domain protein 1	gi|460389686|ref|XP_004240481.1|//PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Solanum lycopersicum]
Solyc01g066010.1.1	1192	11.0955203705934	76.5618529887942	2.78664841677529	7.49234395770528e-09	Up	1.95624029595465e-10	NA	NA	NA	NA	gi|723660099|ref|XP_010324874.1|//PREDICTED: zinc finger CCCH domain-containing protein 46 isoform X5 [Solanum lycopersicum];gi|970056579|ref|XP_015054900.1|//PREDICTED: zinc finger CCCH domain-containing protein 53-like [Solanum pennellii]
Solyc06g068830.2.1	1825	60.2964454182303	28.0777465323999	-1.10264580294193	0.04318970090376	Down	0.0106496068295151	NA	NA	NA	K09286//EREBP-like factor	gi|460393186|ref|XP_004242192.1|//PREDICTED: ethylene-responsive transcription factor ERF114-like [Solanum lycopersicum]
Solyc05g050970.3.1	2944	1165.45318255031	575.56236543697	-1.01784688498545	0.000613481356002626	Down	6.33561445533187e-05	GO:0009534//chloroplast thylakoid	GO:0043169//cation binding;GO:0016744//transferase activity, transferring aldehyde or ketonic groups	NA	K00615//transketolase [EC:2.2.1.1]	gi|460388792|ref|XP_004240048.1|//PREDICTED: transketolase, chloroplastic-like [Solanum lycopersicum]
Solyc08g065150.1.1	1032	429.618623661812	213.482947762823	-1.0089356972391	0.0220275024448746	Down	0.0046126816632119	NA	NA	NA	K07441//beta-1,4-N-acetylglucosaminyltransferase [EC:2.4.1.141]	gi|460399135|ref|XP_004245097.1|//PREDICTED: uncharacterized protein LOC101258979 [Solanum lycopersicum]
Solyc01g006400.3.1	661	5263.9639347645	1328.11837724954	-1.98676586264383	2.22398283274486e-05	Down	1.38141296345439e-06	NA	NA	NA	NA	gi|970004109|ref|XP_015062841.1|//PREDICTED: RNA-binding protein 26-like [Solanum pennellii]
Solyc12g009700.2.1	1397	98.1320294689892	245.620491835755	1.32363492617449	0.00324449343819537	Up	0.000458232820428345	NA	NA	NA	NA	gi|460413400|ref|XP_004252077.1|//PREDICTED: synaptotagmin-5-like [Solanum lycopersicum]
Solyc02g082690.3.1	6574	209.79796433272	464.179887790858	1.14568333472347	3.40222042434297e-05	Up	2.24510708212851e-06	NA	NA	NA	K08518//syntaxin-binding protein 5	gi|460373519|ref|XP_004232566.1|//PREDICTED: uncharacterized protein LOC101257625 isoform X2 [Solanum lycopersicum]
Solyc05g050590.3.1	2222	427.089178933834	1.96639206496418	-7.76284253587748	8.9341377219621e-41	Down	7.73081894676931e-44	NA	GO:0016301//kinase activity;GO:0016772//transferase activity, transferring phosphorus-containing groups	GO:0016310//phosphorylation	K08770//ubiquitin C;K14544//U3 small nucleolar RNA-associated protein 22	gi|460388834|ref|XP_004240069.1|//PREDICTED: phosphatidylinositol 4-kinase gamma 4-like [Solanum lycopersicum]
Solyc02g091070.3.1	3086	46.2670874904742	8.83599140316223	-2.38852236406275	5.10039895506744e-05	Down	3.5422635331281e-06	NA	NA	NA	K03327//multidrug resistance protein, MATE family	gi|460372403|ref|XP_004232020.1|//PREDICTED: MATE efflux family protein 5-like [Solanum lycopersicum]
Solyc02g094520.3.1	2504	176.133689773347	77.615603772761	-1.18225226060789	0.0314165606779492	Down	0.00712683440210475	NA	NA	NA	K11420//euchromatic histone-lysine N-methyltransferase [EC:2.1.1.43]	gi|723668763|ref|XP_010315899.1|//PREDICTED: histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH4 isoform X1 [Solanum lycopersicum]
Solyc06g069420.3.1	1363	418.95430787329	1536.48761395464	1.87477132306416	3.22091174643701e-12	Up	4.38664428972987e-14	NA	NA	NA	NA	gi|970036430|ref|XP_015079550.1|//PREDICTED: uncharacterized protein LOC107023381 [Solanum pennellii]
Solyc06g084060.3.1	2318	1050.95713838247	500.450644442753	-1.07040413308307	2.49429402707762e-05	Down	1.57465213598053e-06	NA	NA	NA	NA	gi|460393504|ref|XP_004242349.1|//PREDICTED: F-box/LRR-repeat protein 17-like [Solanum lycopersicum]
Solyc12g036320.2.1	2512	67.0878749890907	284.032210983289	2.08193059730778	3.13970456371388e-09	Up	7.40630083313997e-11	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|723750294|ref|XP_010314198.1|//PREDICTED: probable serine/threonine-protein kinase At1g18390 isoform X2 [Solanum lycopersicum]
Solyc09g064742.1.1	907	25.7702879600508	59.4636724934574	1.20629990913466	0.0203298187762986	Up	0.00417839729025279	NA	NA	NA	NA	NA
Solyc03g005980.3.1	1641	74.055778182417	323.453092919209	2.12687229722314	7.66231914846855e-11	Up	1.32894248587058e-12	GO:0031224//intrinsic component of membrane	NA	GO:0006810//transport	K09874//aquaporin NIP	gi|460376575|ref|XP_004234073.1|//PREDICTED: aquaporin NIP1-1-like [Solanum lycopersicum]
Solyc10g008260.2.1	776	172.312425017385	63.6479629891174	-1.43684048696037	0.00202260177118953	Down	0.000260016187063756	NA	NA	NA	NA	gi|723734167|ref|XP_010327075.1|//PREDICTED: uncharacterized protein LOC104649466 [Solanum lycopersicum]
Solyc02g067730.2.1	1831	62.5142102257551	6.76486840429096	-3.2080503937336	6.49638130318798e-05	Down	4.68042520526899e-06	GO:0044464//cell part	GO:0046914//transition metal ion binding;GO:0004518//nuclease activity	NA	K18327//RNA exonuclease 4 [EC:3.1.-.-]	gi|460375072|ref|XP_004233332.1|//PREDICTED: RNA exonuclease 4-like [Solanum lycopersicum]
Solyc07g018240.1.1	822	44.5409069243827	11.5523624483299	-1.946943022287	0.0179309820986369	Down	0.00358687102402004	NA	NA	NA	K10249//elongation of very long chain fatty acids protein 4 [EC:2.3.1.199]	gi|460394674|ref|XP_004242925.1|//PREDICTED: elongation of fatty acids protein 3-like [Solanum lycopersicum]
Solyc11g069600.2.1	2635	2344.41505619629	658.345723162572	-1.83231070386502	5.4842325154596e-17	Down	3.59012963765978e-19	NA	GO:0046872//metal ion binding	NA	K12837//splicing factor U2AF 65 kDa subunit	gi|460411505|ref|XP_004251151.1|//PREDICTED: uncharacterized protein LOC101263576 [Solanum lycopersicum]
Solyc03g096150.2.1	383	1.37040890266483	5.63836716921471	2.04067100012091	0.0439211434565592	Up	0.0109207989881264	NA	NA	NA	NA	gi|723684202|ref|XP_010318372.1|//PREDICTED: protein yippee-like [Solanum lycopersicum]
Solyc10g079640.2.1	1917	1101.11109849843	442.194964474881	-1.31620553787131	2.83045084963313e-09	Down	6.63420195380527e-11	NA	GO:0016811//hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	NA	K14664//IAA-amino acid hydrolase [EC:3.5.1.-]	gi|460407558|ref|XP_004249219.1|//PREDICTED: IAA-amino acid hydrolase ILR1-like 6 [Solanum lycopersicum]
Solyc02g088395.1.1	3524	132.109561067851	273.510783337209	1.04986283184437	8.20464393953995e-05	Up	6.10852518592444e-06	NA	NA	NA	K08739//DNA mismatch repair protein MLH3	gi|698485889|ref|XP_009789706.1|//PREDICTED: uncharacterized protein LOC104237290 [Nicotiana sylvestris]
Solyc03g120390.3.1	1111	3686.86493547444	1673.9570527238	-1.13913205136535	1.25274769386509e-10	Down	2.30000329046713e-12	NA	NA	NA	K14484//auxin-responsive protein IAA	gi|525313529|ref|NP_001266077.1|//IAA15 [Solanum lycopersicum]
Solyc09g075870.2.1	3102	487.648936093643	70.7240134353649	-2.78557085721732	1.17910742036383e-21	Down	4.21426655133801e-24	NA	NA	NA	K15718//linoleate 9S-lipoxygenase [EC:1.13.11.58]	gi|460403785|ref|XP_004247367.1|//PREDICTED: probable linoleate 9S-lipoxygenase 5 [Solanum lycopersicum]
Solyc01g096320.3.1	1157	902.603989436805	367.176648077105	-1.29761884688405	3.14484105091221e-05	Down	2.05396691662288e-06	NA	NA	NA	K09338//homeobox-leucine zipper protein	gi|460368324|ref|XP_004230017.1|//PREDICTED: homeobox-leucine zipper protein ATHB-12 [Solanum lycopersicum]
Solyc08g080310.1.1	1485	27.3110059896699	6.12411642346171	-2.15690884137217	0.00282802420418425	Down	0.000388454340461877	NA	GO:0022857//transmembrane transporter activity	GO:0006810//transport	K03327//multidrug resistance protein, MATE family	gi|460401227|ref|XP_004246128.1|//PREDICTED: MATE efflux family protein 6-like [Solanum lycopersicum]
Solyc08g079110.3.1	1317	362.323485159233	729.796723741845	1.01021635255214	2.02014452667497e-05	Up	1.22819923066469e-06	NA	NA	NA	NA	gi|460400427|ref|XP_004245736.1|//PREDICTED: thylakoid lumenal protein At1g12250, chloroplastic [Solanum lycopersicum]
Solyc02g084265.1.1	1270	50.653466260881	333.084498277801	2.71715531028166	1.02982736760292e-18	Up	5.57920018565914e-21	NA	NA	NA	K08739//DNA mismatch repair protein MLH3	gi|971539159|ref|XP_015160667.1|//PREDICTED: DNA mismatch repair protein MLH3 isoform X7 [Solanum tuberosum];gi|697105041|ref|XP_009606330.1|//PREDICTED: DNA mismatch repair protein MLH3 [Nicotiana tomentosiformis]
Solyc07g062580.3.1	2597	1684.33299400985	729.335267479809	-1.20752332524988	1.26598600777973e-06	Down	5.36781877640238e-08	NA	NA	NA	K09527//DnaJ homolog subfamily C member 7	gi|460397422|ref|XP_004244266.1|//PREDICTED: TPR repeat-containing thioredoxin TTL1 [Solanum lycopersicum]
Solyc01g081540.3.1	4553	6725.01218712035	2251.27154408121	-1.57879679972233	2.8062749709676e-12	Down	3.76915035604001e-14	NA	NA	NA	K10357//myosin V	gi|723659350|ref|XP_010323450.1|//PREDICTED: myosin-12 isoform X2 [Solanum lycopersicum];gi|747043993|ref|XP_011086747.1|//PREDICTED: myosin-12 [Sesamum indicum]
Solyc01g109550.2.1	978	13.2164177995706	3.34329482414016	-1.98298871142511	0.0493312854657223	Down	0.0126891647377405	NA	NA	NA	K15032//mTERF domain-containing protein, mitochondrial	gi|723665830|ref|XP_004230958.2|//PREDICTED: uncharacterized protein LOC101266172 [Solanum lycopersicum]
Solyc09g014620.3.1	1054	1874.01882366899	4314.83964953011	1.20317150187812	3.31254971930374e-21	Up	1.27118160785922e-23	NA	NA	NA	K10802//high mobility group protein B1	gi|976909295|gb|KVH96443.1|//Homeodomain-like protein [Cynara cardunculus var. scolymus];gi|976907436|gb|KVH94800.1|//High mobility group (HMG) box domain-containing protein, partial [Cynara cardunculus var. scolymus];gi|970049432|ref|XP_015086227.1|//PREDICTED: high mobility group B protein 1 [Solanum pennellii];gi|460401632|ref|XP_004246321.1|//PREDICTED: high mobility group B protein 1 [Solanum lycopersicum]
Solyc09g092620.3.1	1633	20.5453537308414	49.9605037690622	1.28197585450868	0.0149095733396184	Up	0.0028500956410309	NA	NA	NA	K11818//cytochrome P450, family 83, subfamily B, polypeptide 1 [EC:1.14.-.-];K20617	gi|460404874|ref|XP_004247904.1|//PREDICTED: cytochrome P450 83B1-like [Solanum lycopersicum]
Solyc03g118300.1.1	270	171.874873333457	357.163790878199	1.0552271777254	7.73276817230116e-07	Up	3.08088844788071e-08	NA	NA	NA	NA	NA
Solyc05g006510.1.1	1158	1342.73446192775	664.707763917725	-1.01438191670862	0.000210625245354033	Down	1.81918076899922e-05	NA	NA	NA	K20893	gi|970026625|ref|XP_015074628.1|//PREDICTED: probable galacturonosyltransferase-like 9 [Solanum pennellii]
Solyc03g116670.3.1	1332	5561.84441781692	15442.9509164405	1.47331316267618	4.34000328610129e-21	Up	1.71444825071721e-23	NA	NA	NA	NA	gi|460380429|ref|XP_004235959.1|//PREDICTED: uncharacterized protein LOC101251967 [Solanum lycopersicum]
Solyc07g055840.3.1	1875	45.1585688342372	105.381204971566	1.22254591123627	0.0105977463711932	Up	0.00189467610067383	NA	GO:0016746//transferase activity, transferring acyl groups	GO:0005975//carbohydrate metabolic process;GO:0009060//aerobic respiration	K01647//citrate synthase [EC:2.3.3.1]	gi|460395334|ref|XP_004243239.1|//PREDICTED: citrate synthase 3, peroxisomal-like [Solanum lycopersicum]
BGI_novel_G000210	2504	2.82935932607051	12.6389443543976	2.15932865553546	0.0310913247477869	Up	0.0070300549937622	NA	NA	NA	K00773//queuine tRNA-ribosyltransferase [EC:2.4.2.29]	gi|697115182|ref|XP_009611519.1|//PREDICTED: queuine tRNA-ribosyltransferase-like isoform X2 [Nicotiana tomentosiformis]
Solyc04g076310.3.1	8086	168.929292643278	36.2937561781237	-2.21862623612303	0.0064383184358568	Down	0.00104422839642508	NA	NA	NA	K10395//kinesin family member 4/21/27	gi|723694623|ref|XP_010320210.1|//PREDICTED: chromosome-associated kinesin KIF4A [Solanum lycopersicum]
Solyc08g061270.1.1	351	284.908483710286	117.89663760425	-1.27297600794086	0.00133190027092731	Down	0.000158132639831694	NA	NA	NA	NA	gi|723723415|ref|XP_010325222.1|//PREDICTED: uncharacterized protein LOC101264141 [Solanum lycopersicum]
Solyc03g036480.2.1	309	2.22861285715259	12.832793279574	2.52561730603806	0.00426358301759024	Up	0.000635687716279538	NA	NA	NA	K10775//phenylalanine ammonia-lyase [EC:4.3.1.24]	gi|996064199|gb|AMK01802.1|//phenylalanine ammonia-lyase [Solanum melongena]
Solyc02g071870.3.1	2575	2488.1495585922	804.632923879538	-1.6286705297919	2.08474756186725e-07	Down	7.28642018425384e-09	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723675360|ref|XP_010316865.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase RFK1 [Solanum lycopersicum]
Solyc07g048050.2.1	1104	26.9171196876006	7.18117910560761	-1.90623138986247	0.0444286226896722	Down	0.0110753970632719	GO:0031224//intrinsic component of membrane	GO:0016491//oxidoreductase activity	NA	K03189//urease accessory protein	gi|460395943|ref|XP_004243539.1|//PREDICTED: cytochrome b561 and DOMON domain-containing protein At2g04850 [Solanum lycopersicum]
Solyc05g050980.3.1	2009	121.375646320136	49.4070766950338	-1.29668937553327	0.0318495577675002	Down	0.00725901508485765	GO:0009536//plastid	GO:0016765//transferase activity, transferring alkyl or aryl (other than methyl) groups	GO:0008652//cellular amino acid biosynthetic process;GO:0006950//response to stress	K00800//3-phosphoshikimate 1-carboxyvinyltransferase [EC:2.5.1.19]	gi|460388790|ref|XP_004240047.1|//PREDICTED: 3-phosphoshikimate 1-carboxyvinyltransferase 2 [Solanum lycopersicum]
Solyc01g088650.3.1	1982	733.078423511804	257.794275430474	-1.5077473161076	1.17818023461521e-09	Down	2.58862775400783e-11	NA	NA	NA	K03849//alpha-1,3-glucosyltransferase [EC:2.4.1.265]	gi|460367711|ref|XP_004229714.1|//PREDICTED: probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase isoform X2 [Solanum lycopersicum];gi|460367709|ref|XP_004229713.1|//PREDICTED: probable dolichyl pyrophosphate Glc1Man9GlcNAc2 alpha-1,3-glucosyltransferase isoform X1 [Solanum lycopersicum]
Solyc05g008110.3.1	867	5174.72506239041	2583.03893551955	-1.00241282288586	0.0007552890694208	Down	8.04980291901278e-05	NA	NA	NA	NA	gi|460386306|ref|XP_004238840.1|//PREDICTED: mulatexin [Solanum lycopersicum]
Solyc09g011570.3.1	1129	398.002865194103	84.1197861911254	-2.24226172840319	0.0246850060344247	Down	0.00528340855266524	NA	GO:0003824//catalytic activity	NA	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|723727214|ref|XP_010325821.1|//PREDICTED: probable glutathione S-transferase [Solanum lycopersicum];gi|460401754|ref|XP_004246382.1|//PREDICTED: probable glutathione S-transferase [Solanum lycopersicum]
BGI_novel_G000040	13676	165.923703095072	52.3204949294536	-1.66507190448697	1.99811168080559e-05	Down	1.21330032085035e-06	NA	NA	NA	K01303//acylaminoacyl-peptidase [EC:3.4.19.1];K09493//T-complex protein 1 subunit alpha;K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|971586942|ref|XP_015160938.1|//PREDICTED: uncharacterized protein LOC107059054 [Solanum tuberosum]
Solyc04g076980.3.1	1255	731.459476046077	235.045902669501	-1.63783540747742	2.88416799201289e-11	Down	4.58992874575414e-13	NA	NA	NA	K00924	gi|460384688|ref|XP_004238042.1|//PREDICTED: receptor-like protein kinase HAIKU2 [Solanum lycopersicum]
Solyc03g113680.3.1	2520	265.387754872917	73.6779848771293	-1.84879629676988	0.000273439519015847	Down	2.45972118121479e-05	NA	NA	NA	NA	gi|460380832|ref|XP_004236158.1|//PREDICTED: microtubule-associated protein TORTIFOLIA1 [Solanum lycopersicum]
Solyc03g097000.3.1	7024	609.138533908376	1234.12158371337	1.01864225668394	2.769722996752e-10	Up	5.48109216061532e-12	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial;K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30]	gi|565361659|ref|XP_006347572.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g27270 isoform X1 [Solanum tuberosum];gi|697119821|ref|XP_009613872.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g27270 [Nicotiana tomentosiformis];gi|723683650|ref|XP_010318279.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g27270 [Solanum lycopersicum]
Solyc05g051840.1.1	1134	679.047199865665	321.3233207325	-1.07948616687842	1.67676190806903e-06	Down	7.34293025204047e-08	NA	NA	NA	K20309//trafficking protein particle complex subunit 12	gi|460388683|ref|XP_004239995.1|//PREDICTED: trafficking protein particle complex subunit 12 [Solanum lycopersicum]
Solyc07g055720.3.1	1212	668.929171749467	2335.20922853823	1.80362645022871	2.36748684351248e-10	Up	4.6227451910571e-12	NA	NA	NA	K13993//HSP20 family protein	gi|723714788|ref|XP_010323663.1|//PREDICTED: uncharacterized protein LOC101259555 isoform X1 [Solanum lycopersicum];gi|460395344|ref|XP_004243244.1|//PREDICTED: uncharacterized protein LOC101259555 isoform X2 [Solanum lycopersicum]
Solyc08g006990.2.1	3445	10.1998194751987	60.0082585689025	2.55661744524445	7.6242919280378e-07	Up	3.0290640617035e-08	NA	NA	GO:0010038//response to metal ion	K03695//ATP-dependent Clp protease ATP-binding subunit ClpB	gi|460398302|ref|XP_004244701.1|//PREDICTED: aluminum-activated malate transporter 12-like [Solanum lycopersicum]
Solyc07g043490.1.1	1452	462.386483603441	149.101293291277	-1.63280645437582	2.25788641071321e-06	Down	1.02378518797569e-07	NA	GO:0016757//transferase activity, transferring glycosyl groups	NA	K18822//soyasapogenol B glucuronide galactosyltransferase [EC:2.4.1.272]	gi|927669089|ref|NP_001233853.2|//UDP-Gal:Tomatidine Galactosyltransferase precursor [Solanum lycopersicum]
Solyc04g072800.3.1	3226	2602.460311805	672.357117282163	-1.9525765442174	8.58204607644453e-13	Down	1.05903352636336e-14	NA	GO:0004619//phosphoglycerate mutase activity	GO:0006007//glucose catabolic process	K01834//2,3-bisphosphoglycerate-dependent phosphoglycerate mutase [EC:5.4.2.11]	gi|460384371|ref|XP_004237885.1|//PREDICTED: phosphoglycerate mutase [Solanum lycopersicum]
Solyc01g066640.2.1	1551	171.100300274861	18.2178508791064	-3.2314176090645	8.48151834448754e-05	Down	6.35635234846471e-06	NA	NA	NA	NA	gi|460366770|ref|XP_004229252.1|//PREDICTED: uncharacterized protein DDB_G0271670 [Solanum lycopersicum]
Solyc04g007390.3.1	3635	380.615348131886	761.309725387618	1.0001497693244	0.00437101518298306	Up	0.00065417224973313	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723690384|ref|XP_010319415.1|//PREDICTED: probable serine/threonine-protein kinase At1g18390 [Solanum lycopersicum]
Solyc06g063295.1.1	1319	83.2667867141708	40.150092205832	-1.05233785014111	0.0132062353108362	Down	0.00246039417830176	NA	NA	NA	K12117//LOV kelch protein 2	gi|460392595|ref|XP_004241901.1|//PREDICTED: F-box/kelch-repeat protein At1g51550 [Solanum lycopersicum];gi|970032314|ref|XP_015077460.1|//PREDICTED: F-box/kelch-repeat protein At1g51550 [Solanum pennellii]
Solyc09g011760.3.1	2111	1092.36193386643	2716.29387738581	1.31418862831825	0.000492850393950411	Up	4.90439914220782e-05	GO:0005758//mitochondrial intermembrane space;GO:0019866//organelle inner membrane	GO:0043169//cation binding	GO:0006612//protein targeting to membrane	K14500//BR-signaling kinase [EC:2.7.11.1];K17778//mitochondrial import inner membrane translocase subunit TIM10	gi|350537255|ref|NP_001234286.1|//small zinc finger-like protein [Solanum lycopersicum]
Solyc04g079400.3.1	2761	5208.87618702008	13608.1124236108	1.38542291470482	1.01857605167196e-09	Up	2.21879433377753e-11	NA	NA	NA	K04421//mitogen-activated protein kinase kinase kinase 3 [EC:2.7.11.25];K11229//mitogen-activated protein kinase kinase kinase [EC:2.7.11.1]	gi|460384986|ref|XP_004238187.1|//PREDICTED: mitogen-activated protein kinase kinase kinase YODA isoform X2 [Solanum lycopersicum];gi|723695504|ref|XP_010320358.1|//PREDICTED: mitogen-activated protein kinase kinase kinase YODA isoform X1 [Solanum lycopersicum]
Solyc04g071580.3.1	591	1.25751624372377	17.7430542729629	3.81860543420817	9.53106042308279e-06	Up	5.28188562949622e-07	NA	NA	NA	NA	NA
Solyc08g075210.2.1	1319	287.844239662494	47.2250313823757	-2.60766468089882	1.17895989046057e-14	Down	1.03571250462865e-16	NA	NA	NA	K13065//shikimate O-hydroxycinnamoyltransferase [EC:2.3.1.133]	gi|460401403|ref|XP_004246214.1|//PREDICTED: deacetylvindoline O-acetyltransferase-like [Solanum lycopersicum]
Solyc09g007150.3.1	1056	257.180649560697	110.017819436316	-1.22504488341053	0.0371134274957305	Down	0.00882595843493276	NA	NA	NA	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|460402424|ref|XP_004246712.1|//PREDICTED: glutathione S-transferase L3 [Solanum lycopersicum]
Solyc02g077315.1.1	1335	53.9933913106559	153.126168470152	1.5038661129869	2.65249239541761e-07	Up	9.49029446216007e-09	NA	NA	NA	K07560//D-tyrosyl-tRNA(Tyr) deacylase [EC:3.1.-.-]	gi|460374298|ref|XP_004232948.1|//PREDICTED: D-tyrosyl-tRNA(Tyr) deacylase [Solanum lycopersicum]
Solyc08g007920.2.1	1585	136.640271246507	38.1214252314497	-1.84170878111989	3.14527660926654e-07	Down	1.14545814814523e-08	NA	NA	NA	K14411//RNA-binding protein Musashi	gi|460398341|ref|XP_004244720.1|//PREDICTED: protein IQ-DOMAIN 31-like [Solanum lycopersicum]
Solyc08g008273.1.1	894	33.4018404328646	11.3126073240156	-1.56199611774148	0.00959097465111217	Down	0.00168040515237883	NA	NA	NA	NA	gi|970048254|ref|XP_015085671.1|//PREDICTED: probable WRKY transcription factor 53 [Solanum pennellii];gi|565371320|ref|XP_006352253.1|//PREDICTED: probable WRKY transcription factor 53 [Solanum tuberosum];gi|460398159|ref|XP_004244630.1|//PREDICTED: probable WRKY transcription factor 53 [Solanum lycopersicum]
Solyc06g076665.1.1	741	10.7453024734763	49.3185999055713	2.19842574969197	0.0217454620830683	Up	0.00454380347665017	GO:0043231//intracellular membrane-bounded organelle	GO:0016836//hydro-lyase activity	NA	K01689//enolase [EC:4.2.1.11]	gi|460391148|ref|XP_004241185.1|//PREDICTED: cytosolic enolase 3 [Solanum lycopersicum]
Solyc01g087990.3.1	2361	2154.73259235414	464.716481937496	-2.21308611996835	4.7883717794407e-14	Down	4.59381039788329e-16	GO:0043231//intracellular membrane-bounded organelle	GO:0003677//DNA binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0006351//transcription, DNA-templated	K09264//MADS-box transcription factor, plant;K04454//MADS-box transcription enhancer factor 2C	gi|460367628|ref|XP_004229674.1|//PREDICTED: agamous-like MADS-box protein AGL15 isoform X2 [Solanum lycopersicum]
Solyc04g078460.3.1	1359	2944.16227233056	1111.75302924652	-1.40502085441403	2.091287920265e-08	Down	5.93239688442367e-10	NA	GO:0016811//hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	NA	K13051//beta-aspartyl-peptidase (threonine type) [EC:3.4.19.5]	gi|460384861|ref|XP_004238125.1|//PREDICTED: probable isoaspartyl peptidase/L-asparaginase 2 [Solanum lycopersicum]
Solyc06g065100.3.1	1360	618.682277258309	256.366442346515	-1.27099127762186	0.000728627778964452	Down	7.72213865065034e-05	NA	NA	NA	K09422//myb proto-oncogene protein, plant	gi|460392475|ref|XP_004241841.1|//PREDICTED: myb-related protein 330 [Solanum lycopersicum]
Solyc02g087350.2.1	879	4545.09095775445	741.184255895027	-2.61640502503378	1.39834394393545e-24	Down	3.6826213722905e-27	NA	GO:0008194//UDP-glycosyltransferase activity	NA	K20893	gi|460372895|ref|XP_004232258.1|//PREDICTED: probable galacturonosyltransferase-like 10 [Solanum lycopersicum]
Solyc08g080585.1.1	714	95.2600333973361	230.243180930298	1.27321546930621	0.0061942969245264	Up	0.000994629769521395	NA	NA	GO:0006952//defense response;GO:0001906//cell killing	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460400217|ref|XP_004245632.1|//PREDICTED: thaumatin-like protein [Solanum lycopersicum]
Solyc06g083700.3.1	2691	51.9067272850212	108.108854952709	1.05849126190867	0.0056116867843177	Up	0.00088418902380446	NA	GO:0016709//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen;GO:0000166//nucleotide binding;GO:0050662//coenzyme binding	GO:0008152//metabolic process	K11816//indole-3-pyruvate monooxygenase [EC:1.14.13.168]	gi|460393558|ref|XP_004242376.1|//PREDICTED: probable indole-3-pyruvate monooxygenase YUCCA5 [Solanum lycopersicum];gi|970051645|ref|XP_015087420.1|//PREDICTED: probable indole-3-pyruvate monooxygenase YUCCA5 [Solanum pennellii]
Solyc10g078340.2.1	1596	433.972872774592	142.456529621786	-1.60708311362555	0.000176125634103801	Down	1.48229136000829e-05	NA	NA	NA	K12176//COP9 signalosome complex subunit 2;K11674//microspherule protein 1	gi|460407367|ref|XP_004249124.1|//PREDICTED: uncharacterized protein LOC101264685 [Solanum lycopersicum]
Solyc03g036470.2.1	1878	8.42277200574046	47.5120394556271	2.49592611607043	7.65514313881842e-05	Up	5.64440556365104e-06	GO:0044424//intracellular part;GO:0005737//cytoplasm	GO:0016840//carbon-nitrogen lyase activity;GO:0045548//phenylalanine ammonia-lyase activity	GO:0006558//L-phenylalanine metabolic process;GO:0009800//cinnamic acid biosynthetic process;GO:0006559//L-phenylalanine catabolic process	K10775//phenylalanine ammonia-lyase [EC:4.3.1.24]	gi|723680539|ref|XP_004234632.2|//PREDICTED: phenylalanine ammonia-lyase [Solanum lycopersicum]
Solyc02g078660.3.1	3329	2056.63765062496	4227.48086776546	1.0395105909153	0.0138588336494006	Up	0.00260648267168372	NA	NA	NA	K05747//Wiskott-Aldrich syndrome protein;K02184//formin 2	gi|723674524|ref|XP_010316723.1|//PREDICTED: uncharacterized protein At4g04980 isoform X2 [Solanum lycopersicum];gi|723674521|ref|XP_010316722.1|//PREDICTED: uncharacterized protein At4g04980 isoform X1 [Solanum lycopersicum];gi|970006614|ref|XP_015064164.1|//PREDICTED: uncharacterized protein At4g04980-like [Solanum pennellii]
Solyc03g096760.1.1	339	37.4039803287674	91.9225644607982	1.29722724486621	0.00144457438532759	Up	0.000174240236243802	NA	NA	NA	NA	gi|460379027|ref|XP_004235266.1|//PREDICTED: uncharacterized protein LOC101268660 [Solanum lycopersicum]
Solyc06g075190.1.1	288	2049.74512217879	567.407438928387	-1.85298755724261	9.69332688224548e-17	Down	6.56432971709626e-19	NA	NA	NA	K07442//tRNA (adenine57-N1/adenine58-N1)-methyltransferase [EC:2.1.1.219 2.1.1.220]	gi|460391324|ref|XP_004241273.1|//PREDICTED: uncharacterized protein LOC101262017 [Solanum lycopersicum]
Solyc04g009795.1.1	2679	431.562101202973	126.150050675241	-1.77442739035493	2.8857296040868e-06	Down	1.35383928378338e-07	NA	NA	NA	NA	gi|460382147|ref|XP_004236801.1|//PREDICTED: uncharacterized protein LOC101251972 [Solanum lycopersicum]
BGI_novel_G000276	1575	251.0216432935	119.839507837172	-1.06670815590737	0.00590195130382944	Down	0.000939915721185479	NA	NA	NA	K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6];K12447//UDP-sugar pyrophosphorylase [EC:2.7.7.64];K05658//ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:3.6.3.44]	gi|147805926|emb|CAN69998.1|//hypothetical protein VITISV_006839 [Vitis vinifera]
Solyc04g081270.1.1	327	7.28343588122006	1.79003703011008	-2.02462975408924	0.0420691553769719	Down	0.0103067847936358	NA	NA	NA	K14488//SAUR family protein	gi|460385300|ref|XP_004238342.1|//PREDICTED: auxin-induced protein 15A [Solanum lycopersicum]
Solyc06g074260.3.1	963	1157.34970418179	530.035967770952	-1.12666268618056	0.00769052140740286	Down	0.00129289565273545	NA	NA	NA	NA	gi|723707641|ref|XP_010322440.1|//PREDICTED: uncharacterized protein LOC101253793 [Solanum lycopersicum];gi|723707638|ref|XP_010322439.1|//PREDICTED: uncharacterized protein LOC104648019 [Solanum lycopersicum]
Solyc08g082790.3.1	446	34.418620224787	11.8076058050726	-1.54347280052851	0.0465532116140055	Down	0.0117591520984362	NA	NA	NA	NA	NA
Solyc03g005880.3.1	714	2.01469648373265	303.182098693833	7.23347825074479	3.80973015332483e-27	Up	7.30986598267745e-30	GO:0016020//membrane	NA	GO:0006810//transport	K15382//solute carrier family 50 (sugar transporter)	gi|460376920|ref|XP_004234244.1|//PREDICTED: bidirectional sugar transporter SWEET2a-like [Solanum lycopersicum]
Solyc02g092880.3.1	1096	34.3337765351136	82.5262262542284	1.26522411565941	0.000714876492051744	Up	7.54950456429362e-05	NA	NA	NA	NA	gi|808175943|ref|NP_001294929.1|//uncharacterized protein LOC101250067 isoform 2 [Solanum lycopersicum]
Solyc04g077180.2.1	3110	505.85432555685	209.981924129778	-1.2684568399038	0.000338556661189615	Down	3.14992709978148e-05	NA	NA	NA	NA	gi|460385723|ref|XP_004238551.1|//PREDICTED: putative lipase C4A8.10 [Solanum lycopersicum]
Solyc06g071800.3.1	1146	94.0737436435498	2.62958326891296	-5.16088602987887	1.10213125885206e-10	Down	1.98201181990701e-12	NA	NA	NA	K08867//WNK lysine deficient protein kinase [EC:2.7.11.1]	gi|460391791|ref|XP_004241502.1|//PREDICTED: probable serine/threonine-protein kinase WNK3 [Solanum lycopersicum]
Solyc09g092720.3.1	1281	360.000050845133	86.8044540219866	-2.05215613453173	0.0432840366943008	Down	0.0106874767804626	NA	NA	NA	K12741//heterogeneous nuclear ribonucleoprotein A1/A3;K14651//transcription initiation factor TFIID subunit 15	gi|970053471|ref|XP_015088374.1|//PREDICTED: glycine-rich protein 3 short isoform-like [Solanum pennellii];gi|297739134|emb|CBI28785.3|//unnamed protein product [Vitis vinifera]
Solyc05g008260.3.1	2699	694.572857033842	337.462153566468	-1.04140032049393	3.66450779285536e-06	Down	1.76607768346415e-07	NA	NA	NA	K04083//molecular chaperone Hsp33;K14552//NET1-associated nuclear protein 1 (U3 small nucleolar RNA-associated protein 17);K20781	gi|460386330|ref|XP_004238851.1|//PREDICTED: uncharacterized protein LOC101257369 [Solanum lycopersicum]
Solyc09g055340.3.1	807	67.8603606138329	217.100345486847	1.67772102006987	0.0164139748993304	Up	0.0032086912557156	NA	NA	NA	K11266//MAternally affected uncoordination	gi|460403041|ref|XP_004247014.1|//PREDICTED: uncharacterized protein LOC101249677 [Solanum lycopersicum]
Solyc01g106500.3.1	3019	3990.58937577055	1675.14833581143	-1.25231298274689	1.2384587295574e-13	Down	1.25802805485515e-15	GO:0016020//membrane	GO:0000166//nucleotide binding;GO:0004672//protein kinase activity;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K00924	gi|460369630|ref|XP_004230660.1|//PREDICTED: receptor-like protein kinase HAIKU2 [Solanum lycopersicum]
Solyc02g062550.3.1	1720	6259.47407753144	15836.5137864488	1.33914142702721	2.701262977762e-15	Up	2.11471172065487e-17	NA	NA	NA	K08900//mitochondrial chaperone BCS1	gi|460375479|ref|XP_004233533.1|//PREDICTED: probable mitochondrial chaperone BCS1-A [Solanum lycopersicum]
Solyc03g118470.3.1	2112	21462.5795751	6923.8684035324	-1.63217327328408	6.14711672869526e-10	Down	1.28585285972707e-11	NA	NA	NA	K07766//diphosphoinositol-polyphosphate diphosphatase [EC:3.6.1.52]	gi|460380122|ref|XP_004235807.1|//PREDICTED: nudix hydrolase 18, mitochondrial-like isoform X1 [Solanum lycopersicum]
BGI_novel_G000398	822	2.85381012562359	21.9735143783334	2.94480437318934	0.000798750863849281	Up	8.60655558338729e-05	NA	NA	NA	NA	gi|565388022|ref|XP_006359781.1|//PREDICTED: coiled-coil-helix-coiled-coil-helix domain-containing protein 10, mitochondrial-like [Solanum tuberosum]
Solyc09g007630.3.1	1780	3291.67178604079	424.387445629965	-2.95536660749601	1.54175289972126e-33	Down	2.20416140667448e-36	NA	NA	NA	K09523//DnaJ homolog subfamily C member 3	gi|32395916|gb|AAP41818.1|//P58IPK [Solanum lycopersicum];gi|930425309|ref|NP_001234332.2|//P58IPK-like protein [Solanum lycopersicum]
Solyc01g101180.3.1	1806	5.77275535158673	23.5074191954623	2.02578416822253	0.0135221607354856	Up	0.00253095371177731	GO:0044424//intracellular part	GO:0010334//sesquiterpene synthase activity;GO:0046872//metal ion binding	NA	K18117//viridiflorene synthase [EC:4.2.3.88];K14182//vetispiradiene synthase [EC:4.2.3.21]	gi|460369011|ref|XP_004230358.1|//PREDICTED: vetispiradiene synthase 1 isoform X1 [Solanum lycopersicum]
Solyc11g050820.1.1	6136	1087.10179614163	354.806702871444	-1.61538187071312	1.54603222137326e-15	Down	1.16912143151251e-17	NA	NA	NA	K05909//laccase [EC:1.10.3.2];K00620//glutamate N-acetyltransferase / amino-acid N-acetyltransferase [EC:2.3.1.35 2.3.1.1];K18195//rhamnogalacturonan endolyase [EC:4.2.2.23]	gi|694435491|ref|XP_009344908.1|//PREDICTED: uncharacterized protein LOC103936764 [Pyrus x bretschneideri]
BGI_novel_G000127	476	76.1208057469269	8.95081346865925	-3.08820012418282	7.1232023105389e-05	Down	5.19098678537015e-06	NA	NA	NA	NA	gi|565353569|ref|XP_006343702.1|//PREDICTED: uncharacterized protein LOC102605937 [Solanum tuberosum]
Solyc04g082450.3.1	1600	494.694344223789	228.774700583301	-1.11260988725033	1.07418610375894e-08	Down	2.88955253644711e-10	NA	NA	NA	NA	gi|723696289|ref|XP_010320458.1|//PREDICTED: uncharacterized protein LOC101259630 [Solanum lycopersicum]
Solyc00g071180.3.1	2272	3474.3459938071	580.619869257924	-2.58107558437443	0.00798410919011038	Down	0.00134960882585274	NA	GO:0004866//endopeptidase inhibitor activity	GO:0051346//negative regulation of hydrolase activity	K13899//cystatin-C	gi|723754485|ref|XP_004253396.2|//PREDICTED: multicystatin, partial [Solanum lycopersicum]
Solyc09g014300.3.1	1874	631.887713550355	313.819770734035	-1.00973196889887	1.07960810724024e-06	Down	4.50445971004299e-08	NA	NA	NA	K06119//sulfoquinovosyltransferase [EC:2.4.1.-]	gi|460401662|ref|XP_004246336.1|//PREDICTED: uncharacterized protein LOC101252422 [Solanum lycopersicum]
Solyc02g086890.3.1	1183	780.820775691236	2203.12100287922	1.49648538988369	1.66927501242627e-13	Up	1.7448185371622e-15	NA	NA	NA	K00706//1,3-beta-glucan synthase [EC:2.4.1.34]	gi|460372963|ref|XP_004232292.1|//PREDICTED: uncharacterized protein LOC101249783 [Solanum lycopersicum]
Solyc02g068220.1.1	273	6.68508060430036	1.1521852312405	-2.53657228496875	0.00920414608973612	Down	0.00159981771762908	NA	NA	NA	K11820//N-hydroxythioamide S-beta-glucosyltransferase [EC:2.4.1.195];K13691//pathogen-inducible salicylic acid glucosyltransferase [EC:2.4.1.-]	gi|565398935|ref|XP_006365019.1|//PREDICTED: UDP-glycosyltransferase 87A2-like [Solanum tuberosum]
Solyc08g075320.3.1	2038	78.7112579702349	347.609339485533	2.14282494223807	9.76511686822154e-11	Up	1.72671366744324e-12	NA	GO:0005506//iron ion binding;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K09843//(+)-abscisic acid 8'-hydroxylase [EC:1.14.13.93]	gi|460401001|ref|XP_004246018.1|//PREDICTED: abscisic acid 8'-hydroxylase 1-like [Solanum lycopersicum]
Solyc05g054390.3.1	3388	8677.83290589454	3391.63156621372	-1.35535534883538	6.9578110940801e-07	Down	2.74595328731754e-08	NA	NA	NA	K14491//two-component response regulator ARR-B family	gi|460388282|ref|XP_004239797.1|//PREDICTED: two-component response regulator ARR1-like [Solanum lycopersicum]
Solyc09g089720.2.1	1871	45.4149782833946	137.059995125121	1.59356744540915	0.000665303269893638	Up	6.96340743733673e-05	NA	GO:0043169//cation binding;GO:0019842//vitamin binding;GO:0003824//catalytic activity	GO:0003006//developmental process involved in reproduction;GO:0009692//ethylene metabolic process	K06892//feruloyl-CoA ortho-hydroxylase [EC:1.14.11.-];K13229//2,4-dihydroxy-1,4-benzoxazin-3-one-glucoside dioxygenase [EC:1.14.20.2]	gi|970052188|ref|XP_015087698.1|//PREDICTED: 1-aminocyclopropane-1-carboxylate oxidase homolog [Solanum pennellii]
Solyc07g063190.3.1	1390	3618.91236216687	8514.409621884	1.23435032783666	5.60903319922566e-08	Up	1.73462200517814e-09	NA	NA	NA	K03671//thioredoxin 1	gi|460397342|ref|XP_004244226.1|//PREDICTED: thioredoxin-like [Solanum lycopersicum]
Solyc03g113210.3.1	862	558.557043678013	273.735791669569	-1.02892054296956	0.0325959501287843	Down	0.0074720513218466	NA	NA	NA	K15040//voltage-dependent anion channel protein 2	gi|460380900|ref|XP_004236191.1|//PREDICTED: mitochondrial outer membrane protein porin of 36 kDa-like [Solanum lycopersicum]
Solyc09g011960.2.1	2652	31.7497474674347	7.31757775846653	-2.11730704068061	0.00330081617023503	Down	0.000468422821449455	GO:0005576//extracellular region	GO:0016682//oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor;GO:0046914//transition metal ion binding	GO:0009808//lignin metabolic process	K05909//laccase [EC:1.10.3.2]	gi|460401702|ref|XP_004246356.1|//PREDICTED: laccase-17-like [Solanum lycopersicum]
Solyc01g068470.3.1	534	1.8319581424779	38.0196877900797	4.37528823943216	1.69557593262818e-08	Up	4.75883990120626e-10	NA	NA	NA	NA	gi|723657759|ref|XP_010320706.1|//PREDICTED: uncharacterized protein LOC101254233 [Solanum lycopersicum]
Solyc06g061190.1.1	1107	3136.19400534561	1495.3186124368	-1.06856189056834	2.08242237762735e-05	Down	1.27781448378864e-06	NA	NA	NA	K02184//formin 2	gi|460392719|ref|XP_004241961.1|//PREDICTED: extensin-like [Solanum lycopersicum]
Solyc03g117330.3.1	6709	795.915137990467	1949.81674030949	1.29265201294312	2.701262977762e-15	Up	2.11490267388373e-17	GO:0005737//cytoplasm	GO:0005524//ATP binding;GO:0004827//proline-tRNA ligase activity	GO:0006433//prolyl-tRNA aminoacylation	K01881//prolyl-tRNA synthetase [EC:6.1.1.15]	gi|723686317|ref|XP_010318725.1|//PREDICTED: putative proline--tRNA ligase C19C7.06 isoform X2 [Solanum lycopersicum];gi|971540143|ref|XP_015161652.1|//PREDICTED: proline--tRNA ligase, cytoplasmic-like isoform X2 [Solanum tuberosum]
Solyc08g074865.1.1	1672	3.87131422527971	20.3480123993001	2.3939925608489	0.00342785915225688	Up	0.000491868126663196	NA	NA	NA	NA	gi|971580132|ref|XP_015159146.1|//PREDICTED: bZIP transcription factor 17-like isoform X1 [Solanum tuberosum]
Solyc05g026570.3.1	651	188.08928619884	511.472719741384	1.44323961996747	1.04706036344221e-11	Up	1.5481366547509e-13	NA	NA	NA	NA	gi|961658049|ref|NP_001304839.1|//uncharacterized LOC101243784 [Solanum lycopersicum]
Solyc08g042010.3.1	1663	16.6512986315134	2.54127315129475	-2.71201133882492	0.00204444305335106	Down	0.000263332581938442	NA	GO:0016757//transferase activity, transferring glycosyl groups	NA	K18789//xylogalacturonan beta-1,3-xylosyltransferase [EC:2.4.2.41]	gi|723721079|ref|XP_004244985.2|//PREDICTED: probable glycosyltransferase At5g25310 [Solanum lycopersicum]
Solyc05g044580.3.1	1206	55.0754508918025	120.97898467256	1.1352751517521	0.00102121684675592	Up	0.000115184654122432	NA	NA	NA	NA	NA
Solyc04g081640.2.1	788	6.57415976096981	1.23563491248175	-2.41155397672848	0.0144667981967728	Down	0.00274205151675476	NA	NA	NA	K09487//heat shock protein 90kDa beta	gi|723696102|ref|XP_010320432.1|//PREDICTED: endoplasmin homolog [Solanum lycopersicum]
Solyc02g068010.3.1	1390	1026.14401837167	319.807042998495	-1.68195960983255	1.07944098703868e-10	Down	1.93714578938092e-12	GO:0031224//intrinsic component of membrane	NA	NA	K01832//thromboxane-A synthase [EC:5.3.99.5]	gi|460375016|ref|XP_004233304.1|//PREDICTED: uncharacterized protein LOC101251059 [Solanum lycopersicum]
Solyc06g050130.3.1	2542	173.330582587945	685.810373704399	1.98428349969617	1.60802145124346e-26	Up	3.26686073616053e-29	NA	GO:0043167//ion binding;GO:0016798//hydrolase activity, acting on glycosyl bonds	GO:0044238//primary metabolic process	K07407//alpha-galactosidase [EC:3.2.1.22]	gi|723705863|ref|XP_010322133.1|//PREDICTED: alpha-galactosidase [Solanum lycopersicum]
Solyc01g009080.3.1	782	113.975886202405	271.490564074847	1.25217342989173	0.000555616776527897	Up	5.64396274125403e-05	GO:0009532//plastid stroma;GO:0009534//chloroplast thylakoid	NA	NA	K00326//cytochrome-b5 reductase [EC:1.6.2.2];K09838//zeaxanthin epoxidase [EC:1.14.13.90]	gi|460365166|ref|XP_004228475.1|//PREDICTED: uncharacterized protein LOC101252420 [Solanum lycopersicum]
Solyc08g029000.3.1	2947	13610.9226816706	4758.06962841529	-1.51631658108643	3.07540648097338e-15	Down	2.42977938677355e-17	NA	GO:0016702//oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen;GO:0046914//transition metal ion binding	GO:0006633//fatty acid biosynthetic process	K15718//linoleate 9S-lipoxygenase [EC:1.13.11.58]	gi|460398697|ref|XP_004244890.1|//PREDICTED: probable linoleate 9S-lipoxygenase 5 [Solanum lycopersicum]
Solyc10g018300.2.1	2398	1775.23224682146	5213.64284862176	1.55428397776763	7.40176930310429e-07	Up	2.93787306801167e-08	GO:0009534//chloroplast thylakoid	GO:0043169//cation binding;GO:0016744//transferase activity, transferring aldehyde or ketonic groups	NA	K00615//transketolase [EC:2.2.1.1]	gi|460406209|ref|XP_004248560.1|//PREDICTED: transketolase, chloroplastic [Solanum lycopersicum]
Solyc01g086670.3.1	614	2933.7266389834	5985.19019484398	1.02866264451454	1.88483597248542e-05	Up	1.13104340711597e-06	NA	NA	NA	NA	NA
Solyc02g077120.3.1	954	16.3832648215145	41.2192192626077	1.33109429613322	0.0180421794781755	Up	0.00361454498575187	NA	NA	NA	K21026;K01206//alpha-L-fucosidase [EC:3.2.1.51]	gi|460376124|ref|XP_004233850.1|//PREDICTED: GDSL esterase/lipase At1g28580-like isoform X1 [Solanum lycopersicum]
Solyc02g036290.3.1	2624	84.1839633813172	176.023593684031	1.06415147793875	0.0330922023288485	Up	0.00762191356874382	NA	NA	NA	K01578//malonyl-CoA decarboxylase [EC:4.1.1.9]	gi|723668248|ref|XP_010315705.1|//PREDICTED: LOW QUALITY PROTEIN: malonyl-CoA decarboxylase, mitochondrial [Solanum lycopersicum]
Solyc04g051860.3.1	1527	5187.78953401645	2328.77448527559	-1.15554901329534	2.75882778889187e-08	Down	8.0336068796174e-10	GO:0009536//plastid;GO:0009507//chloroplast	GO:0000287//magnesium ion binding;GO:0004765//shikimate kinase activity;GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0016301//kinase activity	GO:0016310//phosphorylation;GO:0008652//cellular amino acid biosynthetic process;GO:0009423//chorismate biosynthetic process;GO:0009073//aromatic amino acid family biosynthetic process;GO:0006796//phosphate-containing compound metabolic process;GO:0019632//shikimate metabolic process	K00891//shikimate kinase [EC:2.7.1.71]	gi|350538979|ref|NP_001234112.1|//shikimate kinase, chloroplastic [Solanum lycopersicum]
Solyc07g005860.3.1	2551	1037.41092716885	401.772076680749	-1.36853826617873	4.89174848748272e-13	Down	5.81562273154455e-15	NA	NA	NA	K13171//serine/arginine repetitive matrix protein 1	gi|460394043|ref|XP_004242615.1|//PREDICTED: QWRF motif-containing protein 8 [Solanum lycopersicum]
Solyc01g073860.3.1	711	247.440142661793	90.619316660713	-1.44918905335126	2.726705467591e-07	Down	9.79463300494509e-09	NA	NA	NA	K17609//nucleoredoxin [EC:1.8.1.8];K16219//protein N-terminal methyltransferase [EC:2.1.1.244];K20393//PRA1 family protein 3	gi|460366962|ref|XP_004229344.1|//PREDICTED: uncharacterized protein LOC101249575 [Solanum lycopersicum]
Solyc03g117800.3.1	2717	858.097543500396	2119.70223681382	1.30464805850947	0.00051453756761842	Up	5.15699051969703e-05	GO:0031224//intrinsic component of membrane	GO:0046914//transition metal ion binding;GO:0003824//catalytic activity	GO:0006631//fatty acid metabolic process	K15404//aldehyde decarbonylase [EC:4.1.99.5]	gi|460380260|ref|XP_004235875.1|//PREDICTED: protein ECERIFERUM 3 isoform X1 [Solanum lycopersicum];gi|971540250|ref|XP_015161680.1|//PREDICTED: protein ECERIFERUM 3-like isoform X2 [Solanum tuberosum];gi|565349424|ref|XP_006341693.1|//PREDICTED: protein ECERIFERUM 3-like isoform X1 [Solanum tuberosum]
Solyc05g008940.3.1	2201	134.910100586871	597.422758128742	2.14675383100178	1.04524933870299e-19	Up	5.15152984838569e-22	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|723697816|ref|XP_010320744.1|//PREDICTED: probable serine/threonine-protein kinase At1g18390 isoform X2 [Solanum lycopersicum];gi|460386434|ref|XP_004238903.1|//PREDICTED: probable serine/threonine-protein kinase At1g18390 isoform X1 [Solanum lycopersicum]
Solyc05g053380.3.1	1263	26.3541440795901	129.893360361827	2.30122594515856	1.15640340156762e-07	Up	3.8416260480971e-09	NA	NA	NA	K08819//cyclin-dependent kinase 12/13 [EC:2.7.11.22 2.7.11.23];K13424//WRKY transcription factor 33	gi|460388448|ref|XP_004239879.1|//PREDICTED: probable WRKY transcription factor 48 [Solanum lycopersicum]
Solyc12g005270.2.1	470	1673.9600002358	824.336532416103	-1.02195971685563	0.0407905127659661	Down	0.00991218668003668	GO:0031981//nuclear lumen;GO:0030312//external encapsulating structure;GO:0043232//intracellular non-membrane-bounded organelle	GO:0003676//nucleic acid binding	GO:0009292//genetic transfer;GO:0006950//response to stress;GO:0051707//response to other organism	K11251//histone H2A	gi|565395787|ref|XP_006363518.1|//PREDICTED: histone H2A.6-like [Solanum tuberosum]
Solyc01g090680.3.1	2364	277.975478962575	810.823440360541	1.54443017257733	4.53681690682936e-10	Up	9.26821512568978e-12	NA	NA	NA	K02355//elongation factor G	gi|460367826|ref|XP_004229771.1|//PREDICTED: uncharacterized protein LOC101265167 [Solanum lycopersicum]
Solyc05g009980.3.1	3334	4302.03416483231	2124.82169125887	-1.01767720240932	5.26896846415111e-09	Down	1.33210940854385e-10	NA	NA	NA	K18749//protein LSM14	gi|460386578|ref|XP_004238975.1|//PREDICTED: protein decapping 5 isoform X1 [Solanum lycopersicum]
Solyc08g074705.1.1	3196	4753.35589209448	16226.5761587871	1.77134029244683	0.0241708359944903	Up	0.00515517190567215	NA	NA	NA	K10875//DNA repair and recombination protein RAD54 and RAD54-like protein [EC:3.6.4.-]	gi|971570642|ref|XP_015169470.1|//PREDICTED: SNF2 domain-containing protein CLASSY 3-like [Solanum tuberosum];gi|971546964|ref|XP_015163320.1|//PREDICTED: SNF2 domain-containing protein CLASSY 4-like [Solanum tuberosum]
Solyc03g025690.3.1	984	94.8721646818782	326.348075126076	1.7823547596107	6.02558506562859e-10	Up	1.25589696251251e-11	NA	NA	NA	NA	gi|460377237|ref|XP_004234400.1|//PREDICTED: uncharacterized protein LOC101252751 [Solanum lycopersicum];gi|460377233|ref|XP_004234398.1|//PREDICTED: uncharacterized protein LOC101252153 [Solanum lycopersicum]
Solyc07g025210.2.1	1122	205.9031224752	101.57466411667	-1.01942511436002	0.00278595433891606	Down	0.000381220582777971	NA	NA	NA	NA	gi|460394756|ref|XP_004242959.1|//PREDICTED: pentatricopeptide repeat-containing protein At3g02650, mitochondrial-like [Solanum lycopersicum]
Solyc08g014080.3.1	1296	239.814299035039	100.553953396921	-1.25394787864469	0.000117474996845861	Down	9.19292676596653e-06	NA	NA	NA	K10661//E3 ubiquitin-protein ligase MARCH6 [EC:2.3.2.27]	gi|460398412|ref|XP_004244754.1|//PREDICTED: uncharacterized protein LOC101251013 [Solanum lycopersicum]
Solyc05g049990.3.1	891	88.942541736007	564.453301339659	2.66590868940468	1.9456804057848e-44	Up	1.3176165276195e-47	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K12823//ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]	gi|723702606|ref|XP_010321526.1|//PREDICTED: uncharacterized protein LOC101255495 isoform X1 [Solanum lycopersicum];gi|460388889|ref|XP_004240096.1|//PREDICTED: uncharacterized protein LOC101255495 isoform X2 [Solanum lycopersicum];gi|970027344|ref|XP_015074978.1|//PREDICTED: uncharacterized protein LOC107018901 isoform X2 [Solanum pennellii]
Solyc12g010710.1.1	423	962.340039476377	451.978780773065	-1.09029171185568	1.32919187851918e-11	Down	2.01029020001773e-13	NA	NA	NA	NA	gi|763783021|gb|KJB50092.1|//hypothetical protein B456_008G153400 [Gossypium raimondii]
Solyc01g065540.3.1	6528	1240.98795679666	555.489119072758	-1.15965855738391	2.24489709918718e-11	Down	3.49656658789877e-13	NA	NA	NA	K14491//two-component response regulator ARR-B family	gi|460366830|ref|XP_004229281.1|//PREDICTED: two-component response regulator ARR2 [Solanum lycopersicum]
Solyc02g088240.3.1	2450	35.8431220752235	167.384040206943	2.2233937635195	1.5274373780756e-05	Up	8.96464375394257e-07	NA	NA	NA	K14514//ethylene-insensitive protein 3	gi|970006345|ref|XP_015064023.1|//PREDICTED: phosphate transporter PHO1 homolog 3-like [Solanum pennellii];gi|460372783|ref|XP_004232204.1|//PREDICTED: phosphate transporter PHO1 homolog 3 [Solanum lycopersicum]
Solyc01g005530.3.1	2054	186.388696881948	84.4936207696836	-1.14140004589643	0.000114045117198965	Down	8.87732684291413e-06	NA	NA	NA	NA	gi|460365677|ref|XP_004228727.1|//PREDICTED: uncharacterized protein LOC101252018 [Solanum lycopersicum]
Solyc09g042670.3.1	628	28.9520092835329	76.1925010690699	1.3959855380025	0.00124249166598395	Up	0.000145144342471037	NA	NA	NA	NA	gi|460402969|ref|XP_004246979.1|//PREDICTED: uncharacterized protein LOC101253416 [Solanum lycopersicum]
Solyc04g054930.3.1	1750	1773.510556305	725.616926598403	-1.28932790213868	2.60514081851104e-09	Down	6.08650281525716e-11	NA	GO:0019203//carbohydrate phosphatase activity	GO:0005991//trehalose metabolic process	K01087//trehalose 6-phosphate phosphatase [EC:3.1.3.12]	gi|460383385|ref|XP_004237406.1|//PREDICTED: probable trehalose-phosphate phosphatase J [Solanum lycopersicum]
Solyc07g014730.3.1	813	60.1395656422042	9.00971970161297	-2.73876031944483	0.000772827112725707	Down	8.26035299944971e-05	NA	NA	NA	K01047//secretory phospholipase A2 [EC:3.1.1.4]	gi|460394579|ref|XP_004242879.1|//PREDICTED: phospholipase A2-alpha [Solanum lycopersicum]
Solyc01g097860.3.1	1963	512.59660189245	1342.82072716217	1.38937089124224	2.09271864151141e-07	Up	7.32215326036724e-09	NA	NA	NA	K12177//COP9 signalosome complex subunit 3	gi|460368535|ref|XP_004230121.1|//PREDICTED: uncharacterized protein LOC101244036 [Solanum lycopersicum]
Solyc05g052050.1.1	705	1456.32628394615	3672.35908070183	1.33437350968756	3.97631577442556e-06	Up	1.94178249631466e-07	GO:0043231//intracellular membrane-bounded organelle	GO:0001071//nucleic acid binding transcription factor activity;GO:0003676//nucleic acid binding	GO:0050794//regulation of cellular process;GO:0050896//response to stimulus;GO:0006351//transcription, DNA-templated	K13432//pathogenesis-related genes transcriptional activator PTI4;K09286//EREBP-like factor	gi|460388658|ref|XP_004239983.1|//PREDICTED: ethylene-responsive transcription factor 1 [Solanum lycopersicum]
Solyc08g006600.3.1	1018	60.1041262083058	159.19711307566	1.40527823198446	2.44722569217613e-05	Up	1.53941360320485e-06	NA	NA	NA	K17065//dynamin 1-like protein [EC:3.6.5.5]	gi|723719687|ref|XP_010324550.1|//PREDICTED: dynamin-related protein 3A-like isoform X1 [Solanum lycopersicum]
BGI_novel_G000209	1210	42.2375819505262	132.032207270695	1.64429074660424	7.56150435873625e-05	Up	5.56160309305093e-06	NA	NA	NA	K00773//queuine tRNA-ribosyltransferase [EC:2.4.2.29]	gi|697115182|ref|XP_009611519.1|//PREDICTED: queuine tRNA-ribosyltransferase-like isoform X2 [Nicotiana tomentosiformis]
Solyc01g006560.3.1	1641	16816.4043158742	7084.741433444	-1.24708215522107	6.93712857732904e-08	Down	2.20276016526174e-09	GO:0009534//chloroplast thylakoid;GO:0009570//chloroplast stroma	GO:0016702//oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen;GO:0046872//metal ion binding;GO:0046914//transition metal ion binding;GO:0016165//linoleate 13S-lipoxygenase activity	GO:0006633//fatty acid biosynthetic process;GO:0055114//oxidation-reduction process;GO:0031408//oxylipin biosynthetic process	K00454//lipoxygenase [EC:1.13.11.12]	gi|568214619|ref|NP_001274843.1|//linoleate 13S-lipoxygenase 2-1, chloroplastic [Solanum tuberosum];gi|350536681|ref|NP_001234259.1|//lipoxygenase [Solanum lycopersicum]
Solyc04g011640.3.1	3090	562.862410091716	202.862737505168	-1.47227841277365	9.04145651025922e-07	Down	3.65672150057512e-08	NA	NA	NA	K14494//DELLA protein	gi|970025146|ref|XP_015073886.1|//PREDICTED: scarecrow-like protein 14 [Solanum pennellii];gi|460382008|ref|XP_004236732.1|//PREDICTED: scarecrow-like protein 14 [Solanum lycopersicum]
Solyc09g015630.2.1	2394	6.97414008160104	24.0799881976558	1.78774743769965	0.00657492278650479	Up	0.00107011705561143	NA	NA	NA	K13600//chlorophyllide a oxygenase [EC:1.14.13.122]	gi|723726800|ref|XP_010325764.1|//PREDICTED: chlorophyllide a oxygenase, chloroplastic-like [Solanum lycopersicum]
Solyc04g056580.3.1	993	378.682894235011	900.684890286431	1.25003220562393	2.79095900939626e-13	Up	3.10806571400035e-15	NA	NA	NA	NA	gi|460383319|ref|XP_004237375.1|//PREDICTED: uncharacterized protein LOC101253079 [Solanum lycopersicum]
Solyc11g013730.2.1	954	36.1669493624194	79.3700239214922	1.13392232672091	0.0342792831802192	Up	0.00798302343437009	NA	NA	NA	K07466//replication factor A1	gi|970022454|ref|XP_015072525.1|//PREDICTED: replication protein A 70 kDa DNA-binding subunit B-like [Solanum pennellii]
Solyc11g012690.2.1	1051	66.078154475701	658.344313957923	3.31659701178389	2.701262977762e-15	Up	2.12401791705138e-17	NA	NA	NA	K00430//peroxidase [EC:1.11.1.7];K07213//copper chaperone;K10752//histone-binding protein RBBP4	gi|723742266|ref|XP_010312763.1|//PREDICTED: uncharacterized protein LOC101264884 isoform X1 [Solanum lycopersicum]
Solyc08g036500.1.1	444	92.3779965692589	202.625246822095	1.13319277966462	0.000152372351188527	Up	1.2462718097015e-05	GO:0043231//intracellular membrane-bounded organelle	NA	NA	NA	gi|971546669|ref|XP_015163231.1|//PREDICTED: uncharacterized mitochondrial protein AtMg00660-like [Solanum tuberosum]
Solyc03g031755.1.1	1244	723.462886305345	1572.89741833982	1.1204336703208	2.15436150172055e-08	Up	6.15184492026297e-10	GO:0016021//integral component of membrane;GO:0000813//ESCRT I complex	GO:0032403//protein complex binding	GO:0043328//protein targeting to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway	K12184//ESCRT-I complex subunit VPS28	gi|460377404|ref|XP_004234483.1|//PREDICTED: vacuolar protein sorting-associated protein 28 homolog 2-like [Solanum lycopersicum]
Solyc11g010850.2.1	2538	2492.62108449002	445.382964708883	-2.48454530519941	1.02839767900837e-14	Down	8.93754190560321e-17	NA	NA	NA	K01662//1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]	gi|460409471|ref|XP_004250162.1|//PREDICTED: probable 1-deoxy-D-xylulose-5-phosphate synthase 2, chloroplastic [Solanum lycopersicum]
Solyc02g084110.1.1	459	33.889918720323	111.142277498233	1.7134796271702	0.00061076058538468	Up	6.30062274313316e-05	NA	NA	NA	NA	gi|565347858|ref|XP_006340938.1|//PREDICTED: zinc finger CCCH domain-containing protein 45-like [Solanum tuberosum]
Solyc03g115610.3.1	3878	5088.255736625	2103.48885306192	-1.27438700964182	4.10126778879196e-08	Down	1.23902108141458e-09	NA	NA	NA	K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1];K13415//protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1]	gi|460380450|ref|XP_004235969.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g74360 [Solanum lycopersicum]
Solyc10g077120.2.1	585	5001.54790771426	10991.8501036535	1.13598767267024	0.000202163734800109	Up	1.73185411640274e-05	NA	NA	NA	K02723//photosystem II PsbY protein	gi|460407331|ref|XP_004249106.1|//PREDICTED: photosystem II core complex proteins psbY, chloroplastic [Solanum lycopersicum]
BGI_novel_G000065	1712	43.9824890299084	198.766700320486	2.17607492458395	1.08029294701e-05	Up	6.05175394318243e-07	NA	NA	NA	NA	gi|971534089|ref|XP_015163412.1|//PREDICTED: uncharacterized protein LOC107060260 [Solanum tuberosum]
Solyc05g056170.3.1	3674	4140.45708948128	1127.64253095824	-1.87648024638475	9.64292125387549e-16	Down	7.14693561705595e-18	GO:0044424//intracellular part	GO:0016840//carbon-nitrogen lyase activity	GO:0006558//L-phenylalanine metabolic process	K10775//phenylalanine ammonia-lyase [EC:4.3.1.24]	gi|460388001|ref|XP_004239660.1|//PREDICTED: phenylalanine ammonia-lyase-like [Solanum lycopersicum]
Solyc01g108047.1.1	1223	33.9741018319386	83.1433182967614	1.29116491669294	0.0245081784018717	Up	0.00523910721141593	NA	NA	NA	NA	gi|969999384|ref|XP_015082630.1|//PREDICTED: GATA transcription factor 26-like [Solanum pennellii]
Solyc11g020290.2.1	1599	65.4841090350718	234.751879834182	1.84191995383037	0.0162994806351835	Up	0.00318262996601213	GO:0043231//intracellular membrane-bounded organelle;GO:0005634//nucleus	NA	NA	K01595//phosphoenolpyruvate carboxylase [EC:4.1.1.31];K10752//histone-binding protein RBBP4	gi|970004273|ref|XP_015062931.1|//PREDICTED: WD-40 repeat-containing protein MSI1 [Solanum pennellii];gi|723742881|ref|XP_010312862.1|//PREDICTED: WD-40 repeat-containing protein MSI1-like [Solanum lycopersicum];gi|460382446|ref|XP_004236950.1|//PREDICTED: phosphoenolpyruvate carboxylase 4 [Solanum lycopersicum]
Solyc10g006610.3.1	3146	21.4809139700477	44.4695161281201	1.04976132841419	0.0478379943890646	Up	0.0121970687725617	NA	NA	NA	K14487//auxin responsive GH3 gene family	gi|723734659|ref|XP_010327157.1|//PREDICTED: indole-3-acetic acid-amido synthetase GH3.6-like [Solanum lycopersicum]
Solyc10g018610.1.1	501	2373.27571030074	9296.0882404588	1.96974405085552	1.46011940960852e-12	Up	1.85673574284304e-14	GO:0030529//intracellular ribonucleoprotein complex;GO:0009536//plastid	GO:0005198//structural molecule activity;GO:0003824//catalytic activity;GO:0003676//nucleic acid binding	GO:0010467//gene expression	K02886//large subunit ribosomal protein L2	gi|723735799|ref|XP_010327361.1|//PREDICTED: uncharacterized protein LOC104649591 [Solanum lycopersicum]
Solyc03g025610.2.1	2846	155.732596647111	73.1947560740792	-1.08925875125415	0.00153275755873047	Down	0.000186087608804485	NA	NA	NA	K01280//tripeptidyl-peptidase II [EC:3.4.14.10]	gi|307136495|gb|ADN34295.1|//tripeptidyl peptidase II; TPP2 [Cucumis melo subsp. melo];gi|970015900|ref|XP_015069033.1|//PREDICTED: tripeptidyl-peptidase 2-like isoform X3 [Solanum pennellii]
Solyc06g076640.3.1	1596	4246.93849774683	1325.08060566621	-1.68034309378847	1.97384329118863e-34	Down	2.30207456835393e-37	GO:0015630//microtubule cytoskeleton;GO:0043234//protein complex	GO:0032561//guanyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity	GO:0006970//response to osmotic stress;GO:0007017//microtubule-based process;GO:0009207//purine ribonucleoside triphosphate catabolic process;GO:0043623//cellular protein complex assembly	K07375//tubulin beta	gi|460391150|ref|XP_004241186.1|//PREDICTED: tubulin beta chain-like [Solanum lycopersicum]
Solyc07g053620.3.1	1007	696.752943952221	230.89177483615	-1.59343041284397	4.62075702202461e-11	Down	7.76627570610612e-13	NA	GO:0005515//protein binding	GO:0044267//cellular protein metabolic process	K09510//DnaJ homolog subfamily B member 4	gi|970040773|ref|XP_015081780.1|//PREDICTED: dnaJ homolog subfamily B member 13 [Solanum pennellii]
Solyc01g087380.3.1	940	76.756321686281	213.901887711443	1.47859173300489	3.57214600338621e-06	Up	1.7121572642265e-07	NA	NA	NA	K18046//tyrosine-protein phosphatase OCA6 [EC:3.1.3.48]	gi|723659866|ref|XP_010324529.1|//PREDICTED: uncharacterized protein LOC104648599 isoform X2 [Solanum lycopersicum]
Solyc03g095490.3.1	2653	472.117784414086	227.12760275086	-1.05564378248026	0.00445210170535117	Down	0.000669490237633131	GO:0016020//membrane;GO:0016021//integral component of membrane	GO:0005524//ATP binding;GO:0000166//nucleotide binding;GO:0004672//protein kinase activity;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process;GO:0006468//protein phosphorylation	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460378927|ref|XP_004235218.1|//PREDICTED: probable inactive receptor kinase At5g58300 [Solanum lycopersicum]
Solyc09g009520.3.1	1749	22.5483646333235	48.3386006576493	1.10015290664157	0.0481717088778402	Up	0.0123057149465965	NA	NA	NA	NA	gi|460402068|ref|XP_004246536.1|//PREDICTED: uncharacterized protein LOC101260854 [Solanum lycopersicum]
BGI_novel_G000097	1710	101.403053471592	38.490603497006	-1.39752289919297	0.00486328606660998	Down	0.000743947371965243	NA	NA	NA	NA	gi|970007108|ref|XP_015064424.1|//PREDICTED: BURP domain-containing protein 5-like [Solanum pennellii]
Solyc03g025795.1.1	614	136.641510703695	610.655512421721	2.15996291500288	1.91185109353565e-23	Up	5.46654187767907e-26	NA	GO:0043169//cation binding	GO:0006812//cation transport	K04392//Ras-related C3 botulinum toxin substrate 1	gi|723679622|ref|XP_010317603.1|//PREDICTED: LOW QUALITY PROTEIN: nucleolar protein 58-like [Solanum lycopersicum];gi|674952824|emb|CDX80386.1|//BnaC07g30580D [Brassica napus]
Solyc03g033410.3.1	1021	965.10585931735	2083.14321553887	1.11000292699503	0.000499209053777303	Up	4.980821710374e-05	NA	NA	NA	K06689//ubiquitin-conjugating enzyme E2 D [EC:2.3.2.23]	gi|460377495|ref|XP_004234528.1|//PREDICTED: ubiquitin-conjugating enzyme E2 5B-like [Solanum lycopersicum]
Solyc11g012120.2.1	2894	41.769922209918	97.8261187927362	1.22775524796141	0.0478379943890646	Up	0.0121963508237289	NA	NA	NA	NA	gi|460409658|ref|XP_004250255.1|//PREDICTED: uncharacterized protein LOC101253249 [Solanum lycopersicum]
Solyc01g006100.3.1	2930	118.772518726552	28.3893743061412	-2.06477810983015	0.0279181472284242	Down	0.00616236906655999	GO:0043231//intracellular membrane-bounded organelle;GO:0044427//chromosomal part	GO:0016741//transferase activity, transferring one-carbon groups;GO:0003676//nucleic acid binding	GO:0006305//DNA alkylation;GO:0006325//chromatin organization	K00558//DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	gi|723655890|ref|XP_004228597.2|//PREDICTED: DNA (cytosine-5)-methyltransferase 1 isoform X1 [Solanum lycopersicum]
Solyc05g051530.3.1	1894	1896.0460394034	848.900005092796	-1.15932746709515	0.00291456125301924	Down	0.000403520895828096	GO:0044464//cell part	GO:0015604//organic phosphonate transmembrane transporter activity;GO:0032559//adenyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity	GO:0009207//purine ribonucleoside triphosphate catabolic process	K05681//ATP-binding cassette, subfamily G (WHITE), member 2	gi|970030690|ref|XP_015076630.1|//PREDICTED: ABC transporter G family member 11-like [Solanum pennellii]
Solyc01g017400.2.1	591	69.7201283472018	166.654479732632	1.25721296770944	0.000225495924083882	Up	1.97075632673762e-05	GO:0030529//intracellular ribonucleoprotein complex;GO:0009536//plastid	GO:0003723//RNA binding	NA	K02992//small subunit ribosomal protein S7	gi|365823503|gb|AEX01288.1|//ribosomal protein S7 [Halodule wrightii]
Solyc02g080160.3.1	1477	33.3942726811115	9.21125290564408	-1.85813138427659	0.0489408427390074	Down	0.0125574321851027	GO:0030312//external encapsulating structure;GO:0005576//extracellular region	GO:0016758//transferase activity, transferring hexosyl groups;GO:0016798//hydrolase activity, acting on glycosyl bonds	GO:0044042//glucan metabolic process	K08235//xyloglucan:xyloglucosyl transferase [EC:2.4.1.207]	gi|723674001|ref|XP_004232742.2|//PREDICTED: probable xyloglucan endotransglucosylase/hydrolase protein 8 [Solanum lycopersicum]
Solyc04g081370.2.1	1572	899.623561519325	394.567972649169	-1.18904759012448	2.9268240316841e-07	Down	1.05929447647859e-08	NA	NA	NA	NA	gi|460385322|ref|XP_004238353.1|//PREDICTED: uncharacterized protein LOC101261325 [Solanum lycopersicum]
Solyc07g061950.3.1	3303	12581.2439341955	26490.1443086777	1.074181131428	0.000432277941327418	Up	4.20243115270899e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K01652//acetolactate synthase I/II/III large subunit [EC:2.2.1.6]	gi|723719149|ref|XP_004244311.2|//PREDICTED: uncharacterized protein LOC101253806 [Solanum lycopersicum]
Solyc00g110870.3.1	1810	188.346964440053	73.5262513835665	-1.35706144332032	9.09490278450919e-07	Down	3.68175899026783e-08	GO:0016020//membrane	GO:0000166//nucleotide binding	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13415//protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1]	gi|460416209|ref|XP_004253440.1|//PREDICTED: probable inactive receptor kinase At4g23740, partial [Solanum lycopersicum]
Solyc02g077550.3.1	837	44.9040852581982	12.262291682707	-1.8726180761176	0.000858644690203936	Down	9.38112934669763e-05	NA	NA	NA	K17553//protein phosphatase 1 regulatory subunit 11	gi|460374254|ref|XP_004232926.1|//PREDICTED: uncharacterized protein LOC101264691 [Solanum lycopersicum]
Solyc04g077360.3.1	3280	141.097488107752	318.69490276996	1.17548364018601	0.00237376511932092	Up	0.000314180048524115	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723694987|ref|XP_010320278.1|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 [Solanum lycopersicum]
Solyc08g077370.3.1	1560	952.485436910147	388.425382224348	-1.29405955573849	6.74415809610966e-05	Down	4.87162661569998e-06	NA	NA	NA	NA	gi|460400673|ref|XP_004245857.1|//PREDICTED: probable purine permease 11 [Solanum lycopersicum]
Solyc03g083650.3.1	2026	243.772333443303	121.425342057721	-1.00546484838017	0.000260503486345473	Down	2.32473389620565e-05	NA	NA	NA	K13493//cytokinin-N-glucosyltransferase [EC:2.4.1.-];K00699//glucuronosyltransferase [EC:2.4.1.17]	gi|460378689|ref|XP_004235101.1|//PREDICTED: 7-deoxyloganetic acid glucosyltransferase-like [Solanum lycopersicum]
Solyc01g099490.1.1	1096	8.29587677971697	56.7110467452232	2.77316341432831	2.16249282973789e-06	Up	9.73853994430493e-08	NA	NA	NA	K10900//werner syndrome ATP-dependent helicase [EC:3.6.4.12]	gi|970004401|ref|XP_015062996.1|//PREDICTED: ATP-dependent DNA helicase Q-like SIM isoform X1 [Solanum pennellii];gi|723662764|ref|XP_010312965.1|//PREDICTED: ATP-dependent DNA helicase Q-like SIM isoform X8 [Solanum lycopersicum]
Solyc11g011500.2.1	3047	153.272567733611	50.3907998483611	-1.60486724948835	0.000917110772355161	Down	0.000101579161543025	NA	NA	NA	K04908//potassium voltage-gated channel Eag-related subfamily H member 5;K08867//WNK lysine deficient protein kinase [EC:2.7.11.1];K04909//potassium voltage-gated channel Eag-related subfamily H member 6;K04956	gi|460409560|ref|XP_004250206.1|//PREDICTED: potassium channel SKOR-like [Solanum lycopersicum]
Solyc12g005020.2.1	1389	42.7239011124603	10.7284486914813	-1.99360190443356	0.0493312854657223	Down	0.0126889241091256	NA	NA	NA	K19041//E3 ubiquitin-protein ligase RNF38/44 [EC:2.3.2.27]	gi|460412141|ref|XP_004251461.1|//PREDICTED: NEP1-interacting protein-like 1 [Solanum lycopersicum]
Solyc03g119950.1.1	2631	16.5678378084377	3.41159836688836	-2.27986561606232	0.0216420790860676	Down	0.00451416668733994	NA	NA	NA	K01176//alpha-amylase [EC:3.2.1.1]	gi|460379957|ref|XP_004235725.1|//PREDICTED: pentatricopeptide repeat-containing protein At1g15510, chloroplastic [Solanum lycopersicum]
Solyc03g078060.3.1	919	1.3601640376609	9.03815198583522	2.73224716463396	0.00437463274434389	Up	0.000654878242654038	NA	NA	NA	K15449//tRNA wybutosine-synthesizing protein 1 [EC:4.1.3.44]	gi|970002202|ref|XP_015060995.1|//PREDICTED: probable methyltransferase PMT2 [Solanum pennellii]
Solyc07g053420.3.1	657	38.4987937397584	104.034096128481	1.43417128614631	0.0178693703378156	Up	0.00357252949492671	NA	NA	NA	K19038//E3 ubiquitin-protein ligase ATL41 [EC:2.3.2.27]	gi|460395669|ref|XP_004243404.1|//PREDICTED: RING-H2 finger protein ATL40-like [Solanum lycopersicum]
Solyc03g082975.1.1	456	123.345317940158	313.31369574484	1.34490488151025	3.40527136113606e-09	Up	8.08399634641406e-11	NA	NA	NA	NA	gi|460378444|ref|XP_004234982.1|//PREDICTED: uncharacterized protein LOC101262600 isoform X2 [Solanum lycopersicum]
Solyc11g069970.1.1	786	4.62280231551505	1.12077498115236	-2.04427101382034	0.0438398440825431	Down	0.0108873894201982	NA	NA	NA	NA	gi|460412040|ref|XP_004251411.1|//PREDICTED: uncharacterized protein LOC101252955 [Solanum lycopersicum]
Solyc10g084290.2.1	2806	65.975629359834	15.499315770174	-2.08972867991921	0.0201782502673056	Down	0.00413885550419823	NA	NA	NA	K10352//myosin heavy chain;K12472//epidermal growth factor receptor substrate 15;K20478//golgin subfamily B member 1	gi|460408133|ref|XP_004249501.1|//PREDICTED: interactor of constitutive active ROPs 2, chloroplastic-like [Solanum lycopersicum]
Solyc04g008200.3.1	4317	129.309235454348	26.9946845206678	-2.26007805658901	0.00112637875467499	Down	0.000129503892937802	NA	GO:0043531//ADP binding;GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0016462//pyrophosphatase activity	GO:0012501//programmed cell death;GO:0006952//defense response;GO:0006950//response to stress	K13453;K13457//disease resistance protein RPM1	gi|460382929|ref|XP_004237188.1|//PREDICTED: putative late blight resistance protein homolog R1B-16 [Solanum lycopersicum];gi|723691066|ref|XP_010319556.1|//PREDICTED: putative late blight resistance protein homolog R1B-14 [Solanum lycopersicum]
Solyc01g014245.1.1	390	10.1799363948909	2.31754402233439	-2.13505989877974	0.0259609008138898	Down	0.00563755904807268	NA	NA	NA	NA	NA
Solyc01g066880.3.1	1230	576.744196833654	1565.73015246115	1.44083210335892	2.09402289896627e-13	Up	2.2610405267243e-15	NA	NA	NA	K07213//copper chaperone	gi|460366740|ref|XP_004229237.1|//PREDICTED: uncharacterized protein LOC101253123 [Solanum lycopersicum]
Solyc06g068620.3.1	2666	899.771712557782	2172.86009381808	1.27196436859356	0.00130681054877338	Up	0.00015462449871679	NA	NA	NA	K08873//serine/threonine-protein kinase SMG1 [EC:2.7.11.1]	gi|460392127|ref|XP_004241669.1|//PREDICTED: uncharacterized protein LOC101254501 [Solanum lycopersicum]
Solyc05g006740.3.1	1050	1265.75773112002	3681.45721682946	1.54027563956432	2.42108490396373e-09	Up	5.60183301707183e-11	NA	NA	NA	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|723697232|ref|XP_010320650.1|//PREDICTED: glutathione S-transferase U17-like isoform X1 [Solanum lycopersicum]
Solyc08g082990.3.1	2591	743.758821650388	228.84063185588	-1.70049164213318	1.15678239897966e-15	Down	8.61711493596585e-18	NA	NA	NA	NA	gi|460399888|ref|XP_004245468.1|//PREDICTED: oligopeptide transporter 7-like [Solanum lycopersicum]
Solyc01g111620.3.1	1619	1292.34337671862	622.450074895394	-1.05395941413786	0.00315129113386179	Down	0.000442698310528214	NA	NA	NA	NA	gi|460370411|ref|XP_004231046.1|//PREDICTED: uncharacterized protein LOC101267456 [Solanum lycopersicum]
Solyc03g115910.2.1	1263	10.0278885149641	28.1347990127491	1.48833779500284	0.0220207297813931	Up	0.0046096064899801	NA	NA	NA	K09260//MADS-box transcription enhancer factor 2A;K04454//MADS-box transcription enhancer factor 2C	gi|723686780|ref|XP_010318813.1|//PREDICTED: uncharacterized protein LOC101260221 isoform X2 [Solanum lycopersicum]
Solyc10g082000.2.1	3316	70.6888541845679	28.0036609158507	-1.33586731415825	0.0386409710306412	Down	0.00927063477285173	NA	NA	NA	K03695//ATP-dependent Clp protease ATP-binding subunit ClpB	gi|460408695|ref|XP_004249777.1|//PREDICTED: uncharacterized protein LOC101267467 [Solanum lycopersicum]
Solyc03g083260.1.1	234	9.73307834937011	25.7645007421619	1.40441656295777	0.0394069501879191	Up	0.00951815726886533	NA	NA	NA	K14822//rRNA-processing protein CGR1	gi|565343217|ref|XP_006338734.1|//PREDICTED: rRNA-processing protein CGR1 [Solanum tuberosum]
Solyc08g080150.1.1	1113	126.677369719979	57.3960334961251	-1.14213587300393	0.00158399446738909	Down	0.000193559594811127	NA	NA	NA	K16221//transcription factor TCP21 (protein CCA1 HIKING EXPEDITION)	gi|921273985|ref|NP_001233956.2|//TCP transcription factor 20 [Solanum lycopersicum]
Solyc01g014250.2.1	564	86.0681345179604	22.8579793899578	-1.91278132232464	0.000224865382571634	Down	1.96439961749938e-05	NA	NA	NA	NA	NA
Solyc09g009490.3.1	1839	37.720354703993	133.873847956056	1.82745901240048	2.90951635431937e-07	Up	1.05193574736679e-08	NA	NA	NA	K03531//cell division protein FtsZ;K14432//ABA responsive element binding factor	gi|723727874|ref|XP_010325918.1|//PREDICTED: protein ABSCISIC ACID-INSENSITIVE 5 isoform X1 [Solanum lycopersicum]
Solyc08g078190.1.1	969	903.587036303998	332.502649734386	-1.44229773505449	1.26488509171009e-05	Down	7.23261061729182e-07	NA	NA	NA	K09286//EREBP-like factor	gi|460400566|ref|XP_004245805.1|//PREDICTED: ethylene-responsive transcription factor 5-like [Solanum lycopersicum]
Solyc10g006450.3.1	3286	52.5809440910193	10.9411054778887	-2.26478153188491	0.000454275983989813	Down	4.45388718689786e-05	NA	NA	NA	K10956//protein transport protein SEC61 subunit alpha	gi|460405708|ref|XP_004248317.1|//PREDICTED: COBRA-like protein 10 [Solanum lycopersicum]
BGI_novel_G000070	2351	243.675343281717	624.167018593475	1.35697184948073	3.67978692050557e-07	Up	1.35396223034404e-08	NA	NA	NA	K13258//2-hydroxyisoflavanone dehydratase [EC:4.2.1.105];K20506//tuliposide A-converting enzyme [EC:4.2.99.22]	gi|460369931|ref|XP_004230810.1|//PREDICTED: probable carboxylesterase 13 [Solanum lycopersicum]
Solyc07g049440.3.1	1519	540.44688867792	246.662423667396	-1.13161489348929	0.00537813930649822	Down	0.000840106636590692	NA	NA	NA	K21026;K01188//beta-glucosidase [EC:3.2.1.21];K00679//phospholipid:diacylglycerol acyltransferase [EC:2.3.1.158];K10960//geranylgeranyl reductase [EC:1.3.1.83]	gi|460395883|ref|XP_004243509.1|//PREDICTED: GDSL esterase/lipase At2g04570-like [Solanum lycopersicum]
Solyc10g005220.3.1	3837	49.0430574261748	13.595199240961	-1.85095162728729	0.00073143281747807	Down	7.76562607570773e-05	NA	NA	NA	K01931//protein neuralized [EC:2.3.2.27]	gi|460406102|ref|XP_004248512.1|//PREDICTED: uncharacterized protein LOC101246285 [Solanum lycopersicum]
Solyc04g082030.1.1	1296	4574.03332371505	1798.64318166597	-1.34655786608967	1.12627415244714e-05	Down	6.35495782910316e-07	NA	GO:0016831//carboxy-lyase activity	GO:0006595//polyamine metabolic process	K01581//ornithine decarboxylase [EC:4.1.1.17]	gi|350538807|ref|NP_001234616.1|//ornithine decarboxylase [Solanum lycopersicum]
Solyc04g007540.2.1	1832	47.2504846839503	99.4740990082807	1.07399179847081	0.0155967663873226	Up	0.00301138469148757	GO:0044464//cell part;GO:0016021//integral component of membrane	GO:0015291//secondary active transmembrane transporter activity;GO:0015238//drug transmembrane transporter activity;GO:0015297//antiporter activity	GO:0015893//drug transport;GO:0006855//drug transmembrane transport	K03327//multidrug resistance protein, MATE family	gi|723690303|ref|XP_010319397.1|//PREDICTED: MATE efflux family protein 5-like isoform X1 [Solanum lycopersicum];gi|661896135|emb|CDP00713.1|//unnamed protein product [Coffea canephora]
Solyc03g071590.3.1	1847	1062.34636792287	2231.50016745619	1.07075969502485	2.30424785353465e-13	Up	2.50537106723669e-15	NA	GO:0016615//malate dehydrogenase activity	GO:0043648//dicarboxylic acid metabolic process;GO:0044238//primary metabolic process	K00051//malate dehydrogenase (NADP+) [EC:1.1.1.82]	gi|924859512|ref|NP_001234009.2|//chloroplast malate dehydrogenase [Solanum lycopersicum]
Solyc08g062370.3.1	564	11.40672540198	32.8900951092635	1.52776849223771	0.0138145643411389	Up	0.00259659757141948	NA	NA	NA	K05933//aminocyclopropanecarboxylate oxidase [EC:1.14.17.4];K06892//feruloyl-CoA ortho-hydroxylase [EC:1.14.11.-]	gi|723722217|ref|XP_010325018.1|//PREDICTED: thebaine 6-O-demethylase-like [Solanum lycopersicum]
Solyc07g056200.3.1	906	3795.77630395534	12828.1565692194	1.75684698947167	1.58873288514814e-13	Up	1.64970006132764e-15	NA	NA	NA	NA	gi|460395286|ref|XP_004243215.1|//PREDICTED: uncharacterized protein LOC101251005 [Solanum lycopersicum]
Solyc11g068710.2.1	897	216.835838051319	784.688093850613	1.85551608901094	2.98002455734301e-05	Up	1.93315158278505e-06	NA	NA	NA	NA	gi|460411356|ref|XP_004251078.1|//PREDICTED: F-box protein At2g27310 [Solanum lycopersicum]
Solyc02g067790.3.1	1601	2696.09119018943	226.165320249715	-3.57541966243033	1.66776041440745e-23	Down	4.70587024381334e-26	NA	NA	GO:0006810//transport	K02575//MFS transporter, NNP family, nitrate/nitrite transporter	gi|723676777|ref|XP_004233327.2|//PREDICTED: high affinity nitrate transporter 2.7 isoform X1 [Solanum lycopersicum]
Solyc09g009910.3.1	3098	201.839830260408	4541.95075165577	4.49202925970756	3.48173114577848e-87	Up	6.54953187693468e-91	NA	NA	NA	K02021//putative ABC transport system ATP-binding protein	gi|971539566|ref|XP_015161483.1|//PREDICTED: ABC transporter B family member 29, chloroplastic isoform X1 [Solanum tuberosum];gi|460402008|ref|XP_004246507.1|//PREDICTED: ABC transporter B family member 29, chloroplastic [Solanum lycopersicum]
Solyc02g065610.3.1	1582	1448.95768899575	715.02301816483	-1.01895387610102	3.89813505610193e-06	Down	1.90213738441091e-07	NA	NA	NA	K16573//gamma-tubulin complex component 6	gi|460375218|ref|XP_004233404.1|//PREDICTED: protein trichome birefringence-like 19 [Solanum lycopersicum]
Solyc10g055620.2.1	2371	76.7771997706281	309.181266004474	2.00970305766958	1.5002858545421e-15	Up	1.12888326150647e-17	NA	NA	NA	K10532//heparan-alpha-glucosaminide N-acetyltransferase [EC:2.3.1.78]	gi|460406395|ref|XP_004248650.1|//PREDICTED: heparan-alpha-glucosaminide N-acetyltransferase isoform X1 [Solanum lycopersicum]
Solyc09g065110.3.1	1190	82.0799815170939	17.0044856171881	-2.27111504065154	0.00123923805065588	Down	0.000144671018479503	NA	NA	NA	NA	gi|460403362|ref|XP_004247160.1|//PREDICTED: uncharacterized protein LOC101254834 [Solanum lycopersicum]
Solyc02g068580.1.1	1407	521.484864549515	4.7310958249634	-6.78430718879364	7.98376524591459e-54	Down	3.30404129815878e-57	NA	NA	NA	K11303//histone acetyltransferase 1 [EC:2.3.1.48]	gi|460374914|ref|XP_004233253.1|//PREDICTED: histone acetyltransferase type B catalytic subunit [Solanum lycopersicum]
Solyc07g064940.3.1	1158	672.164646864486	1691.77178675799	1.33164839795356	6.54487524158578e-12	Up	9.30761038871115e-14	NA	NA	NA	K03671//thioredoxin 1;K09584//protein disulfide-isomerase A6 [EC:5.3.4.1]	gi|460397066|ref|XP_004244089.1|//PREDICTED: thioredoxin-like protein HCF164, chloroplastic [Solanum lycopersicum]
Solyc06g072310.3.1	5001	40.2205300900341	18.4215967384101	-1.12653397981109	0.0406564351004336	Down	0.00987654632970278	NA	NA	NA	K09338//homeobox-leucine zipper protein	gi|460391734|ref|XP_004241474.1|//PREDICTED: homeobox-leucine zipper protein HDG11-like [Solanum lycopersicum]
Solyc03g097230.1.1	585	919.20085381774	362.09221914653	-1.34402296240417	1.26155959390605e-16	Down	8.63821843833335e-19	NA	NA	NA	K19761//gamma-glutamylaminecyclotransferase [EC:2.3.2.-]	gi|460379216|ref|XP_004235360.1|//PREDICTED: putative gamma-glutamylcyclotransferase At3g02910 [Solanum lycopersicum]
Solyc01g104980.3.1	2623	278.045256910789	602.39248960217	1.11538405629722	1.32106333057859e-05	Up	7.60431488256298e-07	NA	NA	NA	K13416//brassinosteroid insensitive 1-associated receptor kinase 1 [EC:2.7.10.1 2.7.11.1]	gi|460369450|ref|XP_004230575.1|//PREDICTED: F-box/kelch-repeat protein At1g22040 [Solanum lycopersicum];gi|970001689|ref|XP_015058988.1|//PREDICTED: F-box/kelch-repeat protein At1g22040 [Solanum pennellii]
Solyc11g042650.1.1	2238	223.7841710943	571.361174942398	1.3522950118816	2.54837138341608e-07	Up	9.06982441200756e-09	NA	NA	NA	NA	NA
Solyc04g080170.3.1	4577	747.682648805086	359.441049070062	-1.05667087568876	4.1392307439759e-07	Down	1.54169993850118e-08	NA	NA	NA	K08789//microtubule-associated serine/threonine kinase [EC:2.7.11.1]	gi|460385100|ref|XP_004238243.1|//PREDICTED: microtubule-associated serine/threonine-protein kinase 2 isoform X1 [Solanum lycopersicum]
Solyc07g052950.3.1	683	40.375019138746	123.905249212307	1.61770245936559	0.0101889837392065	Up	0.00180818044762367	NA	NA	NA	NA	gi|460395732|ref|XP_004243435.1|//PREDICTED: uncharacterized protein LOC101268883 [Solanum lycopersicum]
Solyc04g078410.3.1	4157	77.2070209077148	15.7973737437117	-2.28904731106259	0.000283136352420197	Down	2.5629272532844e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460384855|ref|XP_004238122.1|//PREDICTED: putative receptor protein kinase ZmPK1 [Solanum lycopersicum]
BGI_novel_G000356	1325	724.943627512355	250.281810555243	-1.53431536804972	1.24914213707234e-07	Down	4.17320623672023e-09	GO:0016021//integral component of membrane	NA	NA	NA	gi|460402434|ref|XP_004246717.1|//PREDICTED: protein YLS9-like [Solanum lycopersicum]
Solyc02g085340.1.1	1830	201.211993373835	80.3072619568345	-1.32511394294252	0.0015160682140279	Down	0.000183704625312483	NA	NA	NA	K14494//DELLA protein	gi|460373183|ref|XP_004232402.1|//PREDICTED: scarecrow-like protein 4 [Solanum lycopersicum]
Solyc02g087340.3.1	4071	5425.54972648723	2452.27227772267	-1.14565014993873	5.54459730765351e-11	Down	9.44959586293092e-13	NA	NA	NA	K20893	gi|460372895|ref|XP_004232258.1|//PREDICTED: probable galacturonosyltransferase-like 10 [Solanum lycopersicum]
Solyc03g121600.3.1	1655	185.105948205173	61.7630139971054	-1.5835361935313	0.0197809835507138	Down	0.00403657090967163	NA	NA	NA	K15403//fatty acid omega-hydroxy dehydrogenase [EC:1.1.-.-]	gi|460381301|ref|XP_004236390.1|//PREDICTED: protein HOTHEAD [Solanum lycopersicum]
Solyc03g115650.3.1	1100	2940.34553912675	6307.643741055	1.10111547277449	0.00306095967468999	Up	0.000427474880077097	NA	GO:0008135//translation factor activity, RNA binding;GO:0043021//ribonucleoprotein complex binding	GO:0018205//peptidyl-lysine modification;GO:0006449//regulation of translational termination;GO:0006448//regulation of translational elongation	K02180//cell cycle arrest protein BUB3;K03263//translation initiation factor 5A	gi|350536367|ref|NP_001234499.1|//eukaryotic translation initiation factor 5A-1 [Solanum lycopersicum]
Solyc03g033770.1.1	345	246.127087158574	523.072332668522	1.08760702204052	0.00494263390338899	Up	0.000757944913100583	NA	NA	NA	K08900//mitochondrial chaperone BCS1	gi|698505202|ref|XP_009798066.1|//PREDICTED: probable mitochondrial chaperone bcs1 [Nicotiana sylvestris]
Solyc12g014210.2.1	2362	2805.874777521	1390.43742033414	-1.01291181031177	1.87032463403187e-07	Down	6.47365938039625e-09	GO:0005730//nucleolus	GO:0000166//nucleotide binding;GO:0003676//nucleic acid binding	GO:0009693//ethylene biosynthetic process;GO:0006952//defense response;GO:0010150//leaf senescence;GO:0008219//cell death	K12741//heterogeneous nuclear ribonucleoprotein A1/A3	gi|460413011|ref|XP_004251889.1|//PREDICTED: UBP1-associated protein 2C-like [Solanum lycopersicum]
Solyc02g069910.2.1	321	115.018653008822	535.95993026956	2.22025729771621	1.36555291886532e-10	Up	2.52766003040532e-12	NA	NA	NA	NA	gi|565372875|ref|XP_006353012.1|//PREDICTED: uncharacterized protein LOC102599613 [Solanum tuberosum]
Solyc05g007870.2.1	2498	90.2602848159729	231.967235164127	1.36175780631395	0.00012159014088273	Up	9.58580465484912e-06	NA	NA	NA	K09422//myb proto-oncogene protein, plant	gi|999808063|ref|NP_001307310.1|//R2R3MYB transcription factor 117 [Solanum lycopersicum]
Solyc10g005740.2.1	2638	7.48827969714422	1.63190631974788	-2.19807608130891	0.028228354914954	Down	0.00624252333296087	NA	NA	NA	K19996//phosphatidylinositol transfer protein SFH5;K02433//aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A [EC:6.3.5.6 6.3.5.7]	gi|723734944|ref|XP_010327215.1|//PREDICTED: phosphatidylinositol/phosphatidylcholine transfer protein SFH13-like isoform X1 [Solanum lycopersicum]
Solyc05g052560.1.1	168	572.664997957257	241.038422713881	-1.24842828923259	5.91660615699267e-06	Down	3.05179346923888e-07	NA	NA	NA	NA	gi|460388576|ref|XP_004239943.1|//PREDICTED: zinc finger CCCH domain-containing protein 29-like [Solanum lycopersicum]
Solyc02g090980.1.1	1068	214.128088713361	98.1341552028529	-1.12564680353115	0.000241653370278593	Down	2.13742315095926e-05	NA	NA	NA	K20716	gi|460375670|ref|XP_004233627.1|//PREDICTED: mitogen-activated protein kinase kinase kinase NPK1-like [Solanum lycopersicum]
Solyc09g011530.2.1	503	90.397234904557	18.8758571554936	-2.25973648484073	0.0149332577578507	Down	0.00285687041755721	NA	GO:0016765//transferase activity, transferring alkyl or aryl (other than methyl) groups;GO:0016740//transferase activity	GO:0009755//hormone-mediated signaling pathway	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|565404501|ref|XP_006367676.1|//PREDICTED: probable glutathione S-transferase [Solanum tuberosum];gi|723727223|ref|XP_010325822.1|//PREDICTED: LOW QUALITY PROTEIN: probable glutathione S-transferase [Solanum lycopersicum]
Solyc02g050287.1.1	1125	53.4002699323931	225.630620958205	2.07904393346839	0.000240440246013929	Up	2.12488388971678e-05	NA	NA	NA	K15173//transcription termination factor 2 [EC:3.6.4.-];K15083//DNA repair protein RAD16;K15711//SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3 [EC:3.6.4.- 2.3.2.27]	gi|970011905|ref|XP_015066883.1|//PREDICTED: uncharacterized ATP-dependent helicase C23E6.02 isoform X4 [Solanum pennellii]
Solyc11g069960.2.1	2556	4644.59305137267	11055.8891494727	1.25119095428913	0.00334144455597775	Up	0.00047582271047313	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460411557|ref|XP_004251175.1|//PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g68400 [Solanum lycopersicum]
Solyc02g081120.3.1	2035	172.558264885458	60.3512081810522	-1.51562901710268	0.00452774112111964	Down	0.000682908734182417	GO:0043231//intracellular membrane-bounded organelle;GO:0005634//nucleus	GO:0003677//DNA binding;GO:0043565//sequence-specific DNA binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0006355//regulation of transcription, DNA-templated;GO:0006351//transcription, DNA-templated	K16670//homeobox protein Meis2;K15613//homeobox protein Meis1	gi|723668663|ref|XP_010315866.1|//PREDICTED: homeobox protein knotted-1-like LET6 isoform X1 [Solanum lycopersicum];gi|795881072|ref|NP_001233941.2|//homeobox protein knotted-1-like LET6 [Solanum lycopersicum]
Solyc03g118620.3.1	3695	793.593484106755	1640.61902008017	1.04776817370467	1.800378128269e-05	Up	1.07494360028702e-06	NA	NA	NA	K10411//dynein light chain 1, axonemal;K16475//leucine-rich repeat and coiled-coil domain-containing protein 1;K17550//protein phosphatase 1 regulatory subunit 7	gi|460380016|ref|XP_004235754.1|//PREDICTED: uncharacterized protein LOC101264912 [Solanum lycopersicum]
Solyc06g050560.3.1	2499	11.3784512719418	2.90197180908052	-1.97119879522402	0.0454047520119485	Down	0.0113990184415249	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K20359//PRA1 family protein 1	gi|460390540|ref|XP_004240887.1|//PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase IMK2 [Solanum lycopersicum]
Solyc09g082810.3.1	1008	190.480447641123	609.942152081161	1.67902950543883	0.00123959557478044	Up	0.000144759392931471	NA	NA	NA	NA	gi|970051326|ref|XP_015087252.1|//PREDICTED: probable H/ACA ribonucleoprotein complex subunit 1 [Solanum pennellii]
Solyc10g084090.2.1	3016	55.5680153173026	19.0724014705066	-1.5427682038162	0.00109293419626603	Down	0.000124795157474319	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial	gi|723740223|ref|XP_010312424.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g55840 [Solanum lycopersicum]
Solyc03g006250.2.1	1550	2158.97778964568	1044.06800732986	-1.04813271417962	0.00171505793502284	Down	0.000212619090194466	NA	NA	NA	K21026	gi|460376622|ref|XP_004234096.1|//PREDICTED: GDSL esterase/lipase At1g28590-like [Solanum lycopersicum]
Solyc01g111790.2.1	3258	22.9098107691202	86.9681752253076	1.92452202137813	0.000296912371835235	Up	2.71331885322719e-05	NA	NA	NA	K11584//serine/threonine-protein phosphatase 2A regulatory subunit B'	gi|970001736|ref|XP_015059186.1|//PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' beta isoform-like [Solanum pennellii]
Solyc11g031970.2.1	1264	58.7573351212417	129.639392051567	1.1416632896812	0.0226066208672903	Up	0.00475946765889227	NA	NA	NA	NA	gi|723743522|ref|XP_010312982.1|//PREDICTED: uncharacterized protein LOC101253651 isoform X1 [Solanum lycopersicum];gi|460410470|ref|XP_004250651.1|//PREDICTED: uncharacterized protein LOC101253651 isoform X2 [Solanum lycopersicum]
Solyc10g005100.3.1	1032	483.527320388555	1025.52602182516	1.08469478675152	0.00207635925877461	Up	0.000268176874919986	NA	NA	NA	NA	gi|460405902|ref|XP_004248413.1|//PREDICTED: plasma membrane-associated cation-binding protein 1 [Solanum lycopersicum]
Solyc01g005410.3.1	721	608.03166730242	1382.29308057609	1.18484516675538	6.63445175990312e-06	Up	3.4669877706943e-07	NA	NA	NA	K17991//peroxygenase [EC:1.11.2.3]	gi|460365633|ref|XP_004228705.1|//PREDICTED: probable peroxygenase 5 [Solanum lycopersicum]
Solyc08g065210.1.1	552	57.2048351252747	24.9145067826401	-1.19915107894883	0.0159244588872152	Down	0.00308941987507834	NA	NA	NA	NA	NA
Solyc07g016180.3.1	4437	1123.14600024625	437.400478337291	-1.36051877584752	8.5339638126463e-06	Down	4.65547311073632e-07	GO:0043231//intracellular membrane-bounded organelle;GO:0005634//nucleus	GO:0003677//DNA binding;GO:0005515//protein binding;GO:0003676//nucleic acid binding	GO:0006355//regulation of transcription, DNA-templated;GO:0009734//auxin-activated signaling pathway;GO:0006351//transcription, DNA-templated;GO:0009755//hormone-mediated signaling pathway	K14486//auxin response factor	gi|942429594|ref|NP_001234740.2|//auxin response factor 19 [Solanum lycopersicum]
Solyc08g078890.2.1	971	6.588546304866	31.5588063042104	2.26001054757681	0.000373344929611615	Up	3.54944558739108e-05	NA	NA	NA	K02883//large subunit ribosomal protein L18e;K00430//peroxidase [EC:1.11.1.7];K11855//ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12]	gi|970044850|ref|XP_015083850.1|//PREDICTED: 14 kDa proline-rich protein DC2.15-like [Solanum pennellii];gi|460400457|ref|XP_004245751.1|//PREDICTED: 36.4 kDa proline-rich protein [Solanum lycopersicum]
Solyc09g005480.3.1	2670	639.605323872857	1429.84965309346	1.16060960487641	1.766480427551e-06	Up	7.80228751672264e-08	NA	NA	NA	K08678//UDP-glucuronate decarboxylase [EC:4.1.1.35]	gi|460402512|ref|XP_004246756.1|//PREDICTED: putative F-box protein At3g16210 isoform X9 [Solanum lycopersicum];gi|723728736|ref|XP_010326064.1|//PREDICTED: putative F-box protein At3g16210 isoform X3 [Solanum lycopersicum]
Solyc06g006110.3.1	1757	1665.33624278503	734.925100635567	-1.18014436538658	0.0102069188342456	Down	0.00181174729345262	NA	NA	NA	K07300//Ca2+:H+ antiporter	gi|460389520|ref|XP_004240400.1|//PREDICTED: vacuolar cation/proton exchanger 3-like [Solanum lycopersicum]
Solyc02g083610.3.1	2336	48.8470592001167	10.5932378052045	-2.20512809442513	0.0148974914339785	Down	0.00284666512389679	NA	NA	NA	NA	gi|723672793|ref|XP_010316432.1|//PREDICTED: uncharacterized protein LOC101264882 [Solanum lycopersicum]
Solyc08g008305.1.1	1005	14.3262759666248	51.8304758613736	1.8551370013055	0.0016499155861715	Up	0.000202918512084072	NA	NA	NA	K09286//EREBP-like factor	gi|460398161|ref|XP_004244631.1|//PREDICTED: ethylene-responsive transcription factor ERF061-like [Solanum lycopersicum]
BGI_novel_G000355	3932	144.975450585363	555.012540835663	1.93671174818627	3.02266232808073e-10	Up	6.01575760554818e-12	NA	NA	NA	K19613//leucine-rich repeat protein SHOC2;K10406//kinesin family member C2/C3	gi|49073108|gb|AAT51733.1|//verticillium wilt disease resistance protein [Solanum aethiopicum]
Solyc09g010110.3.1	1318	951.096987863382	2240.01755468638	1.23584566637013	2.12019994964845e-10	Up	4.10001043686721e-12	NA	GO:0005515//protein binding	GO:0044267//cellular protein metabolic process	NA	gi|460401972|ref|XP_004246489.1|//PREDICTED: uncharacterized protein LOC101247247 [Solanum lycopersicum]
Solyc04g077780.3.1	975	889.98202757181	1839.93248099497	1.04780471796604	1.72351865491897e-12	Up	2.21761993973773e-14	NA	NA	NA	K09377//cysteine and glycine-rich protein	gi|460384779|ref|XP_004238086.1|//PREDICTED: LIM domain-containing protein WLIM1 [Solanum lycopersicum]
Solyc03g119660.2.1	2770	2531.86450625313	1192.82104982825	-1.08582257808963	0.000244006384142722	Down	2.15915355719971e-05	NA	NA	NA	K14006//protein transport protein SEC23	gi|460381357|ref|XP_004236417.1|//PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 2 [Solanum lycopersicum]
Solyc01g068160.3.1	1586	115.28958693132	19.4462175830784	-2.56770073928243	8.84350876697812e-08	Down	2.86798516069795e-09	NA	NA	NA	K20247//hercynylcysteine sulfoxide lyase [EC:4.4.1.-];K11717//cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16]	gi|460366612|ref|XP_004229175.1|//PREDICTED: L-cysteine desulfhydrase [Solanum lycopersicum]
Solyc05g054320.3.1	1494	199.52872762051	38.650696734192	-2.36803015069063	0.00214537523074856	Down	0.000278462924984294	NA	GO:0003824//catalytic activity	NA	K08726//soluble epoxide hydrolase / lipid-phosphate phosphatase [EC:3.3.2.10 3.1.3.76];K10144//RING finger and CHY zinc finger domain-containing protein 1 [EC:2.3.2.27]	gi|460388298|ref|XP_004239805.1|//PREDICTED: bifunctional epoxide hydrolase 2-like [Solanum lycopersicum]
Solyc09g065910.2.1	521	2800.39567214633	6235.60784703451	1.15489951867854	3.52906904055626e-05	Up	2.33810781806605e-06	NA	NA	NA	K02721//photosystem II PsbW protein	gi|460403473|ref|XP_004247215.1|//PREDICTED: photosystem II reaction center W protein, chloroplastic-like [Solanum lycopersicum]
Solyc06g053930.3.1	574	9.94390425543504	56.985344829083	2.51870663214392	1.09127382228892e-06	Up	4.56955517008116e-08	NA	GO:0046872//metal ion binding;GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	GO:0008152//metabolic process	K13448//calcium-binding protein CML	gi|460390851|ref|XP_004241038.1|//PREDICTED: calmodulin-like protein 8 [Solanum lycopersicum]
Solyc07g005895.1.1	1088	137.282120619128	1102.66508230344	3.00577901207601	4.61024709305456e-22	Up	1.54368694989412e-24	NA	NA	NA	K20843	gi|723712215|ref|XP_010323199.1|//PREDICTED: uncharacterized protein LOC104648141 [Solanum lycopersicum]
Solyc08g080670.1.1	753	1312.74039460501	169.452933294516	-2.95362512367556	3.49292359985963e-08	Down	1.04209496414172e-09	NA	NA	GO:0006950//response to stress	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|930425318|ref|NP_001234351.2|//PR5-like protein precursor [Solanum lycopersicum]
Solyc03g112030.2.1	1587	89.6958368223358	43.6118508674756	-1.04032080583432	0.00787141820541381	Down	0.00132789462878388	NA	NA	NA	K07408//cytochrome P450, family 1, subfamily A, polypeptide 1 [EC:1.14.14.1]	gi|723688458|ref|XP_004236280.2|//PREDICTED: uncharacterized protein LOC101247804 [Solanum lycopersicum]
Solyc05g051450.2.1	1040	37.1535767857636	11.8492041129672	-1.64871094665069	0.00835135394596043	Down	0.00142299781870786	NA	NA	NA	NA	gi|723702310|ref|XP_010321483.1|//PREDICTED: uncharacterized protein LOC101258372 [Solanum lycopersicum]
Solyc01g005770.3.1	4276	179.417358588873	414.836871751373	1.20922465280902	2.50749190544588e-07	Up	8.88068843544972e-09	GO:0016021//integral component of membrane	NA	NA	K10406//kinesin family member C2/C3;K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|460365455|ref|XP_004228617.1|//PREDICTED: receptor-like protein 12 [Solanum lycopersicum];gi|4235641|gb|AAD13301.1|//NL0D [Solanum lycopersicum]
Solyc12g009740.2.1	2681	534.117676518308	1460.42207692897	1.45115584716464	0.000414243858257018	Up	4.00840934325452e-05	NA	NA	NA	K10406//kinesin family member C2/C3;K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|971572128|ref|XP_006359448.2|//PREDICTED: receptor-like protein 12, partial [Solanum tuberosum];gi|970067161|ref|XP_015060661.1|//PREDICTED: receptor-like protein 12 [Solanum pennellii];gi|970065560|ref|XP_015059739.1|//PREDICTED: receptor-like protein 12 [Solanum pennellii];gi|460413400|ref|XP_004252077.1|//PREDICTED: synaptotagmin-5-like [Solanum lycopersicum]
Solyc03g114465.1.1	3130	44.2740425928651	15.3176706259927	-1.53126418783808	0.0061930306253287	Down	0.000994193441620676	NA	GO:0016405//CoA-ligase activity	NA	NA	gi|970017906|ref|XP_015070101.1|//PREDICTED: probable acyl-activating enzyme 17, peroxisomal isoform X2 [Solanum pennellii]
Solyc01g112000.3.1	1041	612.824831475335	2035.26577428214	1.73167053936482	2.89594583076674e-25	Up	6.8639799600566e-28	NA	NA	GO:0000003//reproduction	K20628	gi|350535991|ref|NP_001234736.1|//expansin-like protein precursor [Solanum lycopersicum]
Solyc02g084037.1.1	4233	21.605657705835	2755.16799780058	6.99458733112253	2.85767112878876e-159	Up	1.07512081594762e-163	NA	NA	NA	K05909//laccase [EC:1.10.3.2];K08739//DNA mismatch repair protein MLH3	gi|723672638|ref|XP_010316420.1|//PREDICTED: uncharacterized protein LOC104645760 [Solanum lycopersicum];gi|723673065|ref|XP_010316469.1|//PREDICTED: DNA mismatch repair protein MLH3 isoform X1 [Solanum lycopersicum];gi|971566366|ref|XP_015168279.1|//PREDICTED: uncharacterized protein LOC107062294 [Solanum tuberosum];gi|970008023|ref|XP_015064942.1|//PREDICTED: DNA mismatch repair protein MLH3-like isoform X2 [Solanum pennellii]
Solyc01g108790.2.1	1473	45.2454261681022	104.37021183779	1.20586614946107	0.00273158891250983	Up	0.000372433341570189	NA	NA	NA	K05605//3-hydroxyisobutyryl-CoA hydrolase [EC:3.1.2.4]	gi|971563168|ref|XP_006354604.2|//PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase 1-like [Solanum tuberosum];gi|698496693|ref|XP_009794379.1|//PREDICTED: 3-hydroxyisobutyryl-CoA hydrolase 1-like isoform X2 [Nicotiana sylvestris]
Solyc01g010770.3.1	3569	236.836140051321	1104.87376198123	2.2219203918651	1.70044638132763e-18	Up	9.468249226354e-21	GO:0044464//cell part	NA	NA	K15040//voltage-dependent anion channel protein 2	gi|460364983|ref|XP_004228385.1|//PREDICTED: hypersensitive-induced response protein 1 [Solanum lycopersicum]
Solyc11g063600.2.1	447	12.874209124875	33.3306994449307	1.37236778386457	0.0191219833971194	Up	0.00387691378958152	GO:0043231//intracellular membrane-bounded organelle;GO:0030529//intracellular ribonucleoprotein complex	GO:0005198//structural molecule activity	GO:0010467//gene expression	K02946//small subunit ribosomal protein S10	gi|723744631|ref|XP_010313230.1|//PREDICTED: ribosomal protein S10, mitochondrial [Solanum lycopersicum]
Solyc02g080620.3.1	2049	800.13335366143	1622.30536213157	1.01973302878021	4.35176705120828e-07	Up	1.63470872912816e-08	NA	GO:0016836//hydro-lyase activity;GO:0031406//carboxylic acid binding	GO:0006558//L-phenylalanine metabolic process	K05359//arogenate/prephenate dehydratase [EC:4.2.1.91 4.2.1.51]	gi|460373809|ref|XP_004232706.1|//PREDICTED: arogenate dehydratase/prephenate dehydratase 1, chloroplastic [Solanum lycopersicum]
Solyc01g009430.3.1	1125	916.202880896305	312.331945385385	-1.55258696315855	0.00160250236599595	Down	0.000196377816511877	NA	NA	NA	NA	gi|460365130|ref|XP_004228457.1|//PREDICTED: uncharacterized protein At4g22758-like [Solanum lycopersicum]
Solyc06g034340.2.1	1847	20.8520995428935	3.77385512079494	-2.46608170843638	0.00668761891591195	Down	0.00109271365507169	NA	NA	NA	K12581//CCR4-NOT transcription complex subunit 7/8;K02437//glycine cleavage system H protein;K03094//S-phase kinase-associated protein 1;K13126//polyadenylate-binding protein;K05941//glutathione gamma-glutamylcysteinyltransferase [EC:2.3.2.15];K01054//acylglycerol lipase [EC:3.1.1.23]	gi|460390358|ref|XP_004240802.1|//PREDICTED: NAC domain-containing protein 7-like [Solanum lycopersicum]
Solyc06g007130.4.1	1533	409.60507631239	128.786797925234	-1.66924888624431	0.000233353446720154	Down	2.05523107137652e-05	GO:0031224//intrinsic component of membrane;GO:0043231//intracellular membrane-bounded organelle;GO:0031090//organelle membrane	GO:0016705//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	GO:0006631//fatty acid metabolic process	K10257//acyl-lipid omega-3 desaturase [EC:1.14.19.25 1.14.19.35 1.14.19.36]	gi|936975753|ref|NP_001233791.2|//omega-3 fatty acid desaturase [Solanum lycopersicum];gi|723703482|ref|XP_010321686.1|//PREDICTED: omega-3 fatty acid desaturase isoform X1 [Solanum lycopersicum]
Solyc06g007990.3.1	893	90.7155414175442	182.288309897484	1.00680040463284	0.00531869000688917	Up	0.000828321806689879	NA	NA	NA	NA	gi|460389652|ref|XP_004240464.1|//PREDICTED: uncharacterized protein LOC101259250 [Solanum lycopersicum]
Solyc12g019300.2.1	1010	50.9640445129439	323.580304564034	2.66657211788422	9.44981640923884e-21	Up	3.98186394971689e-23	NA	GO:0031406//carboxylic acid binding;GO:0016744//transferase activity, transferring aldehyde or ketonic groups	GO:0008652//cellular amino acid biosynthetic process	K01653//acetolactate synthase I/III small subunit [EC:2.2.1.6]	gi|460413223|ref|XP_004251994.1|//PREDICTED: acetolactate synthase small subunit 1, chloroplastic [Solanum lycopersicum]
Solyc01g108973.1.1	4607	141.005816883572	325.494009843682	1.20687631426974	0.00110143463612154	Up	0.000125848645218251	NA	NA	NA	K17925//sorting nexin-13	gi|723665673|ref|XP_010315280.1|//PREDICTED: B3 domain-containing protein Os11g0197600-like isoform X2 [Solanum lycopersicum];gi|970000661|ref|XP_015089718.1|//PREDICTED: uncharacterized protein LOC107032641 [Solanum pennellii];gi|565359386|ref|XP_006346496.1|//PREDICTED: uncharacterized protein LOC102591656 [Solanum tuberosum]
Solyc11g007620.1.1	1272	46.6977262854672	19.6541493247156	-1.2485183846902	0.0247442450997674	Down	0.00530167328228651	GO:0019005//SCF ubiquitin ligase complex	GO:0004842//ubiquitin-protein transferase activity	GO:0031146//SCF-dependent proteasomal ubiquitin-dependent protein catabolic process;GO:0016567//protein ubiquitination	NA	gi|460410140|ref|XP_004250489.1|//PREDICTED: F-box protein At3g07870-like [Solanum lycopersicum];gi|723741094|ref|XP_010312573.1|//PREDICTED: F-box protein At3g07870-like [Solanum lycopersicum]
Solyc05g051310.1.1	540	14.8509550251202	2.83075543615746	-2.39129669212937	0.00417069064512495	Down	0.000619013340670351	NA	NA	GO:0009987//cellular process	K09286//EREBP-like factor	gi|970028588|ref|XP_015075617.1|//PREDICTED: uncharacterized protein LOC107019757 [Solanum pennellii]
Solyc03g121420.3.1	1103	324.492572011913	717.720370592831	1.14523641462768	0.000127904448096195	Up	1.01872537164775e-05	NA	GO:0042578//phosphoric ester hydrolase activity	GO:0006796//phosphate-containing compound metabolic process	K13248//pyridoxal phosphate phosphatase PHOSPHO2 [EC:3.1.3.74]	gi|460379728|ref|XP_004235613.1|//PREDICTED: inorganic pyrophosphatase 1-like [Solanum lycopersicum]
Solyc02g082260.3.1	5527	1381.28628881246	477.598110434295	-1.53214333327156	0.00202168197196179	Down	0.000259821881723908	GO:0031224//intrinsic component of membrane;GO:0043231//intracellular membrane-bounded organelle;GO:0031090//organelle membrane;GO:0016021//integral component of membrane;GO:0005789//endoplasmic reticulum membrane	GO:0050661//NADP binding;GO:0016616//oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;GO:0000166//nucleotide binding;GO:0004420//hydroxymethylglutaryl-CoA reductase (NADPH) activity;GO:0048037//cofactor binding	GO:0008299//isoprenoid biosynthetic process;GO:0006732//coenzyme metabolic process;GO:0006720//isoprenoid metabolic process;GO:0015936//coenzyme A metabolic process;GO:0055114//oxidation-reduction process	K00021//hydroxymethylglutaryl-CoA reductase (NADPH) [EC:1.1.1.34]	gi|836470067|ref|NP_001296810.1|//3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 [Solanum lycopersicum];gi|970010254|ref|XP_015066014.1|//PREDICTED: 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 [Solanum pennellii]
Solyc06g069590.3.1	2265	5.28706111065882	15.9154556681462	1.58989055534533	0.0452331361648118	Up	0.011340617735226	NA	NA	NA	NA	gi|460393164|ref|XP_004242181.1|//PREDICTED: remorin [Solanum lycopersicum]
Solyc01g068250.2.1	1374	56.7725724636609	25.8595824192437	-1.13449513542226	0.0343487719742963	Down	0.00800437522982661	NA	NA	NA	K10260//F-box and WD-40 domain protein 7;K03362//F-box and WD-40 domain protein 1/11;K14963//COMPASS component SWD3;K16794//platelet-activating factor acetylhydrolase IB subunit alpha	gi|460366600|ref|XP_004229169.1|//PREDICTED: WD repeat-containing protein 5 homolog [Solanum lycopersicum]
Solyc10g080600.2.1	584	30.1857719610883	75.5834178823417	1.32420106211133	0.0256470059554193	Up	0.00555126669550588	NA	NA	NA	K14664//IAA-amino acid hydrolase [EC:3.5.1.-];K08081//tropinone reductase I [EC:1.1.1.206];K10773//endonuclease III [EC:4.2.99.18]	gi|970056956|ref|XP_015055122.1|//PREDICTED: zinc finger protein GIS-like [Solanum pennellii]
Solyc01g091030.3.1	480	261.584695870472	114.0921172221	-1.1970790204587	0.00328331922264559	Down	0.000465524290518401	NA	NA	NA	K14488//SAUR family protein	gi|460367874|ref|XP_004229795.1|//PREDICTED: auxin-induced protein 10A5 [Solanum lycopersicum]
Solyc03g095250.3.1	5854	308.097984062887	111.760785217917	-1.46297518051246	0.000463112590488799	Down	4.55810616248832e-05	NA	NA	NA	K02184//formin 2	gi|723683285|ref|XP_010318218.1|//PREDICTED: uncharacterized protein LOC101251662 isoform X2 [Solanum lycopersicum];gi|723683275|ref|XP_010318215.1|//PREDICTED: uncharacterized protein LOC101251662 isoform X1 [Solanum lycopersicum]
Solyc00g024150.3.1	996	2332.23340836459	5274.46340708601	1.17731215024739	2.12584827699913e-11	Up	3.27115103571349e-13	NA	NA	NA	K01724//4a-hydroxytetrahydrobiopterin dehydratase [EC:4.2.1.96]	gi|460415966|ref|XP_004253324.1|//PREDICTED: uncharacterized protein LOC101265812 [Solanum lycopersicum]
Solyc03g079980.2.1	1326	87.2907125510229	37.6900518129799	-1.21164438564791	0.0355145391555893	Down	0.00834818813559525	NA	NA	NA	K17553//protein phosphatase 1 regulatory subunit 11	gi|460378569|ref|XP_004235043.1|//PREDICTED: uncharacterized protein LOC101255968 [Solanum lycopersicum]
Solyc04g081600.2.1	370	569.457238328903	1.7752433447271	-8.32542690271636	8.96916226905241e-43	Down	7.08624558503012e-46	NA	NA	NA	NA	NA
Solyc03g093490.3.1	2192	50.4099279183619	15.6283784005981	-1.68953979925428	0.0363900125521629	Down	0.00860052892598522	NA	NA	NA	NA	gi|723683082|ref|XP_010318177.1|//PREDICTED: WD repeat-containing protein WRAP73 [Solanum lycopersicum]
Solyc12g010540.1.1	1299	591.074750085163	214.336231494161	-1.4634648474663	2.41515999808465e-05	Down	1.51469966772277e-06	NA	GO:0016857//racemase and epimerase activity, acting on carbohydrates and derivatives;GO:0048037//cofactor binding	GO:0044238//primary metabolic process	K08679//UDP-glucuronate 4-epimerase [EC:5.1.3.6]	gi|460412795|ref|XP_004251783.1|//PREDICTED: UDP-glucuronate 4-epimerase 1-like [Solanum lycopersicum]
Solyc02g089310.1.1	1317	156.561348832027	57.8780913097311	-1.43563883956041	1.48804220791316e-05	Down	8.69299981496451e-07	NA	GO:0003824//catalytic activity	NA	K15196//transcription factor IIIB 90 kDa subunit	gi|460372626|ref|XP_004232129.1|//PREDICTED: F-box/kelch-repeat protein At5g15710 [Solanum lycopersicum]
Solyc07g064820.1.1	1473	287.710306409202	992.645441513468	1.78666159763875	7.77545838258281e-08	Up	2.48650851211264e-09	NA	NA	NA	K20716	gi|460397582|ref|XP_004244346.1|//PREDICTED: mitogen-activated protein kinase kinase kinase 2-like [Solanum lycopersicum]
Solyc02g081980.3.1	1945	1125.69005474513	249.276966043825	-2.17498816866423	0.028505630407271	Down	0.00631242063872074	GO:0016020//membrane	GO:0000166//nucleotide binding	NA	K14641//apyrase [EC:3.6.1.5]	gi|460373628|ref|XP_004232617.1|//PREDICTED: apyrase-like isoform X1 [Solanum lycopersicum]
Solyc08g066420.1.1	510	89.6470352034364	33.7892230400656	-1.40769269413279	0.00112022084736968	Down	0.000128431717159105	NA	NA	NA	NA	gi|460399243|ref|XP_004245151.1|//PREDICTED: lachrymatory-factor synthase [Solanum lycopersicum]
Solyc05g054340.3.1	4177	51.8020732241425	146.270245146653	1.4975545770087	0.0065414411748139	Up	0.0010635482350585	NA	NA	NA	K13453;K13457//disease resistance protein RPM1	gi|460388296|ref|XP_004239804.1|//PREDICTED: putative late blight resistance protein homolog R1A-3 [Solanum lycopersicum]
Solyc03g006780.2.1	1853	6.27394968986383	1.18504545036415	-2.40443156815736	0.0147941347854811	Down	0.00282134948185116	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1];K05349//beta-glucosidase [EC:3.2.1.21]	gi|970015108|ref|XP_015068563.1|//PREDICTED: uncharacterized protein LOC107013090 [Solanum pennellii]
Solyc07g008010.3.1	2067	113.02539527911	231.663115027396	1.03538139610749	0.00439993720142185	Up	0.000659162902033928	GO:0043231//intracellular membrane-bounded organelle	GO:0003676//nucleic acid binding	NA	K09422//myb proto-oncogene protein, plant	gi|460394349|ref|XP_004242766.1|//PREDICTED: transcription factor MYB82 [Solanum lycopersicum]
Solyc01g095570.3.1	1498	607.793325558045	251.589367215833	-1.27250988041546	3.46418736133897e-08	Down	1.02961174396455e-09	GO:0031224//intrinsic component of membrane;GO:0019866//organelle inner membrane	NA	GO:0006810//transport	K14684//solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41	gi|723661452|ref|XP_010326870.1|//PREDICTED: mitochondrial adenine nucleotide transporter ADNT1 isoform X1 [Solanum lycopersicum]
Solyc11g066040.2.1	2610	1362.01967044595	674.602473901165	-1.01363802494201	2.44722569217613e-05	Down	1.5376589068232e-06	NA	NA	NA	K08332//vacuolar protein 8	gi|460411115|ref|XP_004250960.1|//PREDICTED: U-box domain-containing protein 13 [Solanum lycopersicum]
Solyc03g112320.3.1	2215	620.654350812134	301.611522606712	-1.04109849384461	7.15303223114635e-09	Down	1.86226422270627e-10	NA	NA	NA	K13411	gi|460381033|ref|XP_004236257.1|//PREDICTED: ferric reduction oxidase 8, mitochondrial [Solanum lycopersicum]
Solyc01g096670.3.1	1769	4203.89587921139	1529.00961561147	-1.45912945799452	6.70902625139458e-12	Down	9.5915348966514e-14	NA	GO:0016709//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen;GO:0005506//iron ion binding	GO:0008152//metabolic process	K09754//coumaroylquinate(coumaroylshikimate) 3'-monooxygenase [EC:1.14.13.36]	gi|460368382|ref|XP_004230046.1|//PREDICTED: cytochrome P450 98A2-like [Solanum lycopersicum]
Solyc01g098840.3.1	2923	5658.39522400895	2087.04549592255	-1.43893089826527	2.75700494585475e-11	Down	4.34606874459421e-13	NA	NA	NA	K00869//mevalonate kinase [EC:2.7.1.36]	gi|460368656|ref|XP_004230181.1|//PREDICTED: mevalonate kinase [Solanum lycopersicum]
Solyc03g059260.3.1	2182	884.808307621549	1877.78642216709	1.08559614494653	0.000168120966025337	Up	1.40417059659988e-05	NA	NA	NA	K03797	gi|723681439|ref|XP_010317889.1|//PREDICTED: carboxyl-terminal-processing peptidase 3, chloroplastic [Solanum lycopersicum]
Solyc08g080550.1.1	2657	119.16897087913	35.555490488435	-1.74486437340409	0.00752295781687793	Down	0.00126005297971183	NA	GO:0017111//nucleoside-triphosphatase activity;GO:0005488//binding	NA	K16911//ATP-dependent RNA helicase DDX21 [EC:3.6.4.13];K12858//ATP-dependent RNA helicase DDX23/PRP28 [EC:3.6.4.13];K14778//ATP-dependent RNA helicase DDX49/DBP8 [EC:3.6.4.13]	gi|460400225|ref|XP_004245636.1|//PREDICTED: DEAD-box ATP-dependent RNA helicase 47, mitochondrial [Solanum lycopersicum]
Solyc10g075150.2.1	863	2837.99655206852	14592.621499469	2.36229433852101	1.40919129008382e-13	Up	1.44206181679007e-15	NA	GO:0005488//binding	GO:0010876//lipid localization;GO:0051234//establishment of localization	NA	gi|460407218|ref|XP_004249051.1|//PREDICTED: non-specific lipid-transfer protein 2-like [Solanum lycopersicum]
Solyc02g088200.3.1	1890	2141.78024738434	896.252748410875	-1.25683292011243	1.70840737539318e-05	Down	1.01488910675163e-06	NA	NA	NA	K18666//activating signal cointegrator complex subunit 1	gi|723671365|ref|XP_010316245.1|//PREDICTED: activating signal cointegrator 1 complex subunit 1-like [Solanum lycopersicum];gi|970006482|ref|XP_015064096.1|//PREDICTED: activating signal cointegrator 1 complex subunit 1-like [Solanum pennellii]
Solyc08g078090.1.1	1659	373.963530415556	792.832946563598	1.08411933287054	0.00162097324858595	Up	0.000199115035990712	NA	NA	NA	K16818//phospholipase A1 [EC:3.1.1.32]	gi|460400581|ref|XP_004245812.1|//PREDICTED: phospholipase A1-Ibeta2, chloroplastic-like [Solanum lycopersicum]
Solyc01g005715.1.1	1690	69.8471479649586	150.868214267867	1.11101577000159	0.00556726958966533	Up	0.000875305478375147	NA	NA	NA	K10406//kinesin family member C2/C3	gi|460365455|ref|XP_004228617.1|//PREDICTED: receptor-like protein 12 [Solanum lycopersicum]
Solyc07g063350.3.1	4776	27.7813111747222	8.84427920633583	-1.65129821513952	0.0191130992308443	Down	0.00387352516130007	NA	NA	NA	K17046//protein DEK;K13171//serine/arginine repetitive matrix protein 1;K11294//nucleolin	gi|460397302|ref|XP_004244206.1|//PREDICTED: uncharacterized protein LOC101248895 [Solanum lycopersicum]
Solyc02g092600.3.1	862	144.910118484789	445.481582060235	1.62020745041586	3.9735080495414e-17	Up	2.57126931723522e-19	NA	NA	GO:0050896//response to stimulus	K10523//speckle-type POZ protein	gi|971537161|ref|XP_015168353.1|//PREDICTED: LOW QUALITY PROTEIN: BTB/POZ domain-containing protein At5g67385 [Solanum tuberosum]
Solyc10g017570.3.1	1450	891.333810642618	415.225186688774	-1.10207187495618	0.000913791792903561	Down	0.000101142793631387	NA	GO:0003824//catalytic activity	NA	K15095//(+)-neomenthol dehydrogenase [EC:1.1.1.208]	gi|460406247|ref|XP_004248578.1|//PREDICTED: (+)-neomenthol dehydrogenase isoform X1 [Solanum lycopersicum]
Solyc03g111530.3.1	1358	31.1891276293454	68.6168294398246	1.13751926459863	0.0359389930893372	Up	0.00846797757202182	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723688141|ref|XP_004236317.2|//PREDICTED: putative cysteine-rich receptor-like protein kinase 9 [Solanum lycopersicum]
Solyc07g006590.1.1	267	87.8393878025843	217.644599791698	1.30903431973647	0.00961253316264919	Up	0.00168558041597116	NA	NA	NA	NA	gi|460394149|ref|XP_004242667.1|//PREDICTED: uncharacterized protein LOC101265142 [Solanum lycopersicum]
Solyc05g018730.3.1	658	110.437694832458	47.5991602774805	-1.21422465245203	0.0100009204527967	Down	0.00176757114019364	NA	NA	NA	NA	NA
Solyc01g097000.3.1	2396	158.496274836193	57.6735314135527	-1.45846766485503	0.0489376049277756	Down	0.0125547602709745	GO:0016021//integral component of membrane	GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds	GO:0005975//carbohydrate metabolic process	K05349//beta-glucosidase [EC:3.2.1.21]	gi|698508976|ref|XP_009799725.1|//PREDICTED: lysosomal beta glucosidase-like [Nicotiana sylvestris];gi|460368436|ref|XP_004230073.1|//PREDICTED: lysosomal beta glucosidase [Solanum lycopersicum]
Solyc01g009270.1.1	1422	6.34945553862005	21.9481818085427	1.78939663937694	0.00934938452729668	Up	0.00162999607844386	NA	NA	NA	K13161//heterogeneous nuclear ribonucleoprotein R;K09528//DnaJ homolog subfamily C member 8	gi|723655087|ref|XP_010312347.1|//PREDICTED: protein FAF-like, chloroplastic [Solanum lycopersicum]
Solyc08g061180.1.1	6542	159.029525978583	354.480658909771	1.15641226743445	0.00956206504392951	Up	0.00167426074922678	GO:0009536//plastid	NA	NA	K14557//U3 small nucleolar RNA-associated protein 6	gi|460401914|ref|XP_004246460.1|//PREDICTED: pentatricopeptide repeat-containing protein At3g53700, chloroplastic [Solanum lycopersicum];gi|970057501|ref|XP_015055404.1|//PREDICTED: uncharacterized protein LOC107001974 [Solanum pennellii]
Solyc03g097840.3.1	2734	10893.5030301274	4332.43772927514	-1.33021703835763	1.81109930515713e-11	Down	2.78001699211478e-13	GO:0031224//intrinsic component of membrane	NA	GO:0051234//establishment of localization	K15102//solute carrier family 25 (mitochondrial phosphate transporter), member 3	gi|460379115|ref|XP_004235310.1|//PREDICTED: mitochondrial phosphate carrier protein 3, mitochondrial [Solanum lycopersicum]
Solyc02g078590.1.1	1290	18.6588820794682	45.7634241470336	1.29433245087584	0.00998944914145752	Up	0.00176412619525965	NA	NA	NA	K01988//lactosylceramide 4-alpha-galactosyltransferase [EC:2.4.1.228]	gi|460374079|ref|XP_004232839.1|//PREDICTED: uncharacterized protein At4g19900 [Solanum lycopersicum]
Solyc03g117920.1.1	1074	26.0324733380345	7.09045202260125	-1.87636287971071	0.0498992373144003	Down	0.0128690470951924	NA	NA	NA	NA	gi|723686110|ref|XP_010318685.1|//PREDICTED: protein FRIGIDA-like [Solanum lycopersicum]
Solyc07g041000.3.1	1075	11.8351524893878	35.7468409514116	1.59473745799818	0.0111506242369393	Up	0.00200694455792015	NA	NA	NA	K14397//cleavage and polyadenylation specificity factor subunit 5	gi|460396345|ref|XP_004243736.1|//PREDICTED: cleavage and polyadenylation specificity factor subunit 5 isoform X1 [Solanum lycopersicum]
Solyc09g082270.3.1	676	184.968037687291	701.353763428991	1.92286632856088	1.57934857260911e-05	Up	9.30496563094758e-07	NA	NA	NA	NA	gi|460404206|ref|XP_004247575.1|//PREDICTED: non-specific lipid-transfer protein-like protein At2g13820 [Solanum lycopersicum]
Solyc08g082270.3.1	2250	122.136648819829	54.6517828658843	-1.16015570044946	0.000364073608327885	Down	3.45034394047383e-05	NA	NA	NA	NA	gi|460399988|ref|XP_004245518.1|//PREDICTED: uncharacterized protein LOC101257395 [Solanum lycopersicum]
Solyc12g007020.2.1	2191	115.303258793176	18.8868316188375	-2.60998068192296	0.00249826825261534	Down	0.000333848373096189	NA	NA	NA	NA	gi|460413355|ref|XP_004252055.1|//PREDICTED: uncharacterized protein LOC101262597 [Solanum lycopersicum]
Solyc03g111120.3.1	2085	793.513661314765	352.179365580437	-1.17194467784735	0.0036923665036876	Down	0.000536351658041303	GO:0005777//peroxisome	GO:0046912//transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer;GO:0016747//transferase activity, transferring acyl groups other than amino-acyl groups	GO:0044262//cellular carbohydrate metabolic process;GO:0009060//aerobic respiration	K01638//malate synthase [EC:2.3.3.9]	gi|460381212|ref|XP_004236346.1|//PREDICTED: malate synthase, glyoxysomal [Solanum lycopersicum]
Solyc05g055730.3.1	2933	109.169045862415	34.2791858973815	-1.67115909576911	0.0119589726256041	Down	0.00218482961135943	NA	GO:0016646//oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor;GO:0004489//methylenetetrahydrofolate reductase (NAD(P)H) activity	GO:0006555//methionine metabolic process;GO:0035999//tetrahydrofolate interconversion;GO:0000096//sulfur amino acid metabolic process;GO:0055114//oxidation-reduction process	K00297//methylenetetrahydrofolate reductase (NADPH) [EC:1.5.1.20]	gi|460388080|ref|XP_004239699.1|//PREDICTED: probable methylenetetrahydrofolate reductase [Solanum lycopersicum];gi|342722655|gb|AEL33268.1|//methylenetetrahydrofolate reductase [Nicotiana tabacum]
Solyc04g009170.2.1	1523	413.472013436432	188.565244188826	-1.13272589435217	2.25218683559291e-08	Down	6.45660785824604e-10	NA	NA	NA	K11982//E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]	gi|460382231|ref|XP_004236843.1|//PREDICTED: E3 ubiquitin-protein ligase RING1-like [Solanum lycopersicum]
Solyc09g097810.3.1	563	3.47892105582839	55.359291073147	3.9921136214497	3.43571042061519e-10	Up	6.87659121056162e-12	NA	NA	NA	NA	gi|16303746|gb|AAL16783.1|AF313766_1//SAR8.2 protein precursor [Capsicum annuum]
Solyc09g007760.3.1	1054	1963.92852343004	807.717965223124	-1.28181889093538	1.28667953741092e-05	Down	7.37906506694134e-07	NA	NA	NA	K09872//aquaporin PIP	gi|723728328|ref|XP_010325988.1|//PREDICTED: aquaporin PIP2-1-like [Solanum lycopersicum]
Solyc04g077610.3.1	1299	119.705046890368	41.7449985975093	-1.5198087130666	0.000285915068592073	Down	2.59345835355714e-05	GO:0043234//protein complex	GO:0019787//ubiquitin-like protein transferase activity	GO:0032446//protein modification by small protein conjugation	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K08332//vacuolar protein 8	gi|460384752|ref|XP_004238073.1|//PREDICTED: U-box domain-containing protein 30-like [Solanum lycopersicum]
Solyc07g056420.4.1	1658	2107.11206811174	4302.4344547274	1.02988616689043	0.000152242000161672	Up	1.24462703668665e-05	NA	GO:0016765//transferase activity, transferring alkyl or aryl (other than methyl) groups	GO:0009755//hormone-mediated signaling pathway	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|926657597|ref|NP_001234157.2|//glutathione S-transferase-like protein [Solanum lycopersicum]
Solyc00g013133.1.1	267	208.422659425035	597.066110149405	1.51837854878851	7.18654367433957e-17	Up	4.75858422379144e-19	NA	NA	NA	NA	NA
Solyc02g080560.1.1	297	132.008271991534	50.1535180217236	-1.39620552811246	0.00077811733860233	Down	8.33153478428229e-05	NA	NA	NA	NA	gi|698527212|ref|XP_009760448.1|//PREDICTED: uncharacterized protein LOC104212793 [Nicotiana sylvestris]
Solyc01g079200.3.1	1296	3005.07324292853	6144.21874124145	1.03182942426833	0.00224308796725857	Up	0.000293649924612615	NA	GO:0016491//oxidoreductase activity	NA	K04125//gibberellin 2-oxidase [EC:1.14.11.13]	gi|902967463|ref|NP_001234747.2|//gibberellin 2-oxidase [Solanum lycopersicum]
Solyc01g090250.3.1	3924	91.8952318127526	43.3845245500756	-1.08280948724398	0.0308369218321141	Down	0.00695744997092507	NA	NA	NA	K13141//integrator complex subunit 4	gi|723660394|ref|XP_010325336.1|//PREDICTED: uncharacterized protein LOC101249311 [Solanum lycopersicum]
Solyc12g036380.1.1	661	8.21390666385466	27.8183408211149	1.75989591637745	0.0140577655978003	Up	0.00265288759362552	NA	NA	NA	NA	NA
Solyc01g107780.3.1	1928	8692.12763806822	4225.97784761724	-1.04042415493321	7.63489736564883e-05	Down	5.62420204738164e-06	NA	GO:0016740//transferase activity	NA	K13496//UDP-glucosyl transferase 73C [EC:2.4.1.-]	gi|460369817|ref|XP_004230753.1|//PREDICTED: scopoletin glucosyltransferase-like [Solanum lycopersicum]
Solyc09g010210.3.1	1802	888.91985776779	391.867027417624	-1.18168916964147	2.0624214789938e-06	Down	9.25684283084876e-08	NA	GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds	GO:0009827//plant-type cell wall modification;GO:0044238//primary metabolic process	K01179//endoglucanase [EC:3.2.1.4]	gi|350538697|ref|NP_001234867.1|//endo-1,4-beta-glucanase precursor [Solanum lycopersicum]
Solyc01g099260.3.1	1357	170.907192319807	408.692784813019	1.25780366230468	3.91946494253449e-09	Up	9.49637104210765e-11	NA	GO:0005515//protein binding	GO:0044267//cellular protein metabolic process	K03686//molecular chaperone DnaJ;K02704//photosystem II CP47 chlorophyll apoprotein;K08244//alpha-glucan, water dikinase [EC:2.7.9.4]	gi|460368714|ref|XP_004230210.1|//PREDICTED: uncharacterized protein LOC101245500 [Solanum lycopersicum]
Solyc02g072140.1.1	1371	87.6562500433266	39.4249353131556	-1.15274857342002	0.0038465025156284	Down	0.000563806388295269	NA	NA	NA	K06636//structural maintenance of chromosome 1	gi|460374507|ref|XP_004233052.1|//PREDICTED: uncharacterized protein LOC101250471 [Solanum lycopersicum]
Solyc08g059800.3.1	2386	186.987047831503	85.6397594058234	-1.12658569359128	0.00276520103290435	Down	0.000377744354795926	NA	NA	NA	K11294//nucleolin	gi|460398979|ref|XP_004245024.1|//PREDICTED: RNA polymerase II degradation factor 1 [Solanum lycopersicum]
Solyc07g026930.2.1	1793	2.15681517055187	8.79417583032829	2.02764582875424	0.0466753845823425	Up	0.0118058168001162	NA	NA	NA	NA	gi|460394792|ref|XP_004242975.1|//PREDICTED: hippocampus abundant transcript-like protein 1 [Solanum lycopersicum]
Solyc01g089910.3.1	1850	204.549207584512	87.0087008762382	-1.23321636539958	0.0307277356676274	Down	0.00692113689989643	NA	NA	NA	K07192//flotillin	gi|460367751|ref|XP_004229734.1|//PREDICTED: flotillin-like protein 6 [Solanum lycopersicum];gi|697188208|ref|XP_009603138.1|//PREDICTED: flotillin-like protein 6 isoform X3 [Nicotiana tomentosiformis]
Solyc04g049260.1.1	501	44.9905144121388	114.82417519281	1.35173365280426	0.000103585809378813	Up	7.9540495463566e-06	GO:0030529//intracellular ribonucleoprotein complex;GO:0009536//plastid	GO:0003723//RNA binding;GO:0005198//structural molecule activity	GO:0010467//gene expression	K02992//small subunit ribosomal protein S7;K02950//small subunit ribosomal protein S12	gi|357458595|ref|XP_003599578.1|//NAD(P)H-quinone oxidoreductase subunit 2 [Medicago truncatula]
Solyc05g050340.3.1	3405	467.083162815134	2988.46360118493	2.67765262554464	6.72248474121247e-30	Up	1.08753515377026e-32	NA	NA	NA	K18835//WRKY transcription factor 2;K13425//WRKY transcription factor 22;K17525//chitinase domain-containing protein 1	gi|460388859|ref|XP_004240081.1|//PREDICTED: probable WRKY transcription factor 41 [Solanum lycopersicum]
Solyc04g081920.3.1	1698	263.070046577948	536.831663908314	1.02902277730298	1.6720323302331e-09	Up	3.78692047705164e-11	NA	GO:0016866//intramolecular transferase activity;GO:0003676//nucleic acid binding	GO:0009451//RNA modification	K06180//23S rRNA pseudouridine1911/1915/1917 synthase [EC:5.4.99.23]	gi|723696159|ref|XP_010320443.1|//PREDICTED: RNA pseudouridine synthase 2, chloroplastic isoform X2 [Solanum lycopersicum]
Solyc02g062385.1.1	984	89.6330670353046	28.5090886822966	-1.65260914014874	0.00196565588764779	Down	0.000251734109915465	NA	NA	NA	K19027//zinc finger FYVE domain-containing protein 26;K17895//GATA-binding protein 3	gi|460375507|ref|XP_004233547.1|//PREDICTED: GATA transcription factor 5 [Solanum lycopersicum]
Solyc02g085940.3.1	539	35.782343547984	76.764893428046	1.10119880087173	0.0201968654423996	Up	0.00414651221667323	GO:0009536//plastid;GO:0009507//chloroplast	GO:0016831//carboxy-lyase activity;GO:0004497//monooxygenase activity;GO:0005488//binding;GO:0016491//oxidoreductase activity;GO:0016984//ribulose-bisphosphate carboxylase activity	GO:0015977//carbon fixation;GO:0019253//reductive pentose-phosphate cycle;GO:0009853//photorespiration;GO:0043094//cellular metabolic compound salvage;GO:0055114//oxidation-reduction process	K01602//ribulose-bisphosphate carboxylase small chain [EC:4.1.1.39]	gi|822606574|ref|NP_001296139.1|//ribulose bisphosphate carboxylase small chain 3B, chloroplastic [Solanum lycopersicum];gi|970008460|ref|XP_015065089.1|//PREDICTED: ribulose bisphosphate carboxylase small chain 2C, chloroplastic [Solanum pennellii]
Solyc03g026210.3.1	1382	429.443515832201	910.386422785999	1.08401065393931	5.22167023487781e-05	Up	3.64220339182222e-06	GO:0044424//intracellular part	GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	GO:0009085//lysine biosynthetic process	K16908//chloroplast NAD(P)H dehydrogenase [EC:1.6.99.-]	gi|460377149|ref|XP_004234357.1|//PREDICTED: putative 4-hydroxy-tetrahydrodipicolinate reductase 3, chloroplastic isoform X2 [Solanum lycopersicum]
Solyc09g011390.3.1	2535	398.211069392594	49.1541903884615	-3.01814700887795	1.35476362537231e-05	Down	7.82378542116816e-07	NA	NA	NA	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460401781|ref|XP_004246394.1|//PREDICTED: protein NRT1/ PTR FAMILY 5.6-like [Solanum lycopersicum]
Solyc01g080770.3.1	3855	407.39281698357	141.647979020982	-1.52411052535909	0.00916343656276234	Down	0.00159170754741436	GO:0016020//membrane	GO:0004672//protein kinase activity	NA	K00924	gi|460367272|ref|XP_004229499.1|//PREDICTED: leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 [Solanum lycopersicum]
Solyc04g054950.3.1	1040	2108.16263223023	645.795761379631	-1.7068362895239	1.59988880610892e-08	Down	4.46018662651134e-10	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K08081//tropinone reductase I [EC:1.1.1.206]	gi|460383383|ref|XP_004237405.1|//PREDICTED: tropinone reductase homolog [Solanum lycopersicum]
Solyc07g042590.3.1	1961	896.153928479727	1966.14053389909	1.13354798077025	6.01967368672868e-08	Up	1.87746782780213e-09	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460396222|ref|XP_004243677.1|//PREDICTED: serine/threonine-protein kinase At5g01020 [Solanum lycopersicum]
Solyc09g014710.3.1	3901	554.959409417781	92.4352144182232	-2.58586777915353	0.00354053820321408	Down	0.000510288491259075	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460401629|ref|XP_004246320.1|//PREDICTED: wall-associated receptor kinase 2-like [Solanum lycopersicum]
Solyc07g054760.1.1	252	78.2795983877317	12.1316324059533	-2.68986266484601	7.3643839648915e-06	Down	3.94817424754341e-07	NA	NA	NA	NA	gi|460395478|ref|XP_004243310.1|//PREDICTED: uncharacterized protein LOC101254813 [Solanum lycopersicum]
Solyc02g072520.3.1	3269	371.75494200586	829.7164669701	1.15826649770595	4.87467996390429e-05	Up	3.36165853041255e-06	NA	GO:0016301//kinase activity	NA	K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1];K13415//protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1]	gi|460374495|ref|XP_004233046.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At2g24230 [Solanum lycopersicum]
Solyc01g090240.3.1	2797	171.15829073511	60.4486883629082	-1.50154823591648	0.0170659696098179	Down	0.00337338616741849	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process	K08286//protein-serine/threonine kinase [EC:2.7.11.-]	gi|350538695|ref|NP_001234611.1|//AvrPto-dependent Pto-interacting protein 3 [Solanum lycopersicum]
Solyc06g082530.2.1	2633	2686.52875689237	867.168167911326	-1.63135957669589	7.35143678939845e-14	Down	7.21867946588787e-16	NA	NA	NA	K00487//trans-cinnamate 4-monooxygenase [EC:1.14.13.11]	gi|723711663|ref|XP_004242547.2|//PREDICTED: scarecrow-like protein 9 [Solanum lycopersicum];gi|460393761|ref|XP_004242477.1|//PREDICTED: trans-cinnamate 4-monooxygenase-like [Solanum lycopersicum]
Solyc02g080040.3.1	1689	939.944229226848	2194.19318062643	1.2230434853543	5.14164651071554e-05	Up	3.58251668090489e-06	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|970005903|ref|XP_015063796.1|//PREDICTED: putative receptor-like protein kinase At4g00960 [Solanum pennellii]
Solyc12g088390.1.1	603	762.676263292838	40.6884951085738	-4.22837797212177	1.67880350727493e-71	Down	5.05283222656112e-75	NA	NA	NA	NA	gi|460414938|ref|XP_004252818.1|//PREDICTED: zinc finger protein ZAT10-like [Solanum lycopersicum]
Solyc01g098985.1.1	3359	396.839836153252	159.201158162461	-1.31770602441391	0.00865557987082307	Down	0.00148590710874965	NA	NA	NA	K10406//kinesin family member C2/C3	gi|723662586|ref|XP_010312676.1|//PREDICTED: kinesin-4 isoform X2 [Solanum lycopersicum];gi|460370871|ref|XP_004231272.1|//PREDICTED: kinesin-4 isoform X1 [Solanum lycopersicum]
Solyc09g010800.4.1	850	29700.5636745534	69349.391099349	1.22339290388109	0.00284322258777644	Up	0.00039139772192152	NA	GO:0046872//metal ion binding	NA	NA	gi|970052567|ref|XP_015087895.1|//PREDICTED: metallothionein-like protein type 2 B [Solanum pennellii];gi|914615145|ref|NP_001234046.2|//metallothionein-like protein type 2 B [Solanum lycopersicum]
Solyc05g009120.3.1	1293	1312.15535992849	540.467678488627	-1.27965829760204	1.39775248601815e-08	Down	3.84934093214932e-10	NA	NA	NA	NA	gi|460386450|ref|XP_004238911.1|//PREDICTED: uncharacterized protein LOC101249358 [Solanum lycopersicum]
Solyc06g048410.3.1	1384	2022.52128205009	5441.41371588239	1.42782663850632	5.40643072314719e-09	Up	1.37093089067013e-10	GO:0009536//plastid	GO:0016209//antioxidant activity;GO:0004784//superoxide dismutase activity;GO:0043169//cation binding;GO:0046872//metal ion binding;GO:0003824//catalytic activity	GO:0019430//removal of superoxide radicals;GO:0072593//reactive oxygen species metabolic process;GO:0055114//oxidation-reduction process	K04564//superoxide dismutase, Fe-Mn family [EC:1.15.1.1]	gi|924183304|ref|NP_001233789.2|//iron superoxide dismutase isoform 2 [Solanum lycopersicum];gi|924183549|ref|NP_001300698.1|//iron superoxide dismutase isoform 1 [Solanum lycopersicum]
Solyc02g085430.3.1	5094	47.7194522099073	99.2093657319927	1.05589884093012	0.031419079550476	Up	0.00712898678588866	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|698508562|ref|XP_009799537.1|//PREDICTED: proline-rich receptor-like protein kinase PERK5 [Nicotiana sylvestris];gi|723672174|ref|XP_010316353.1|//PREDICTED: proline-rich receptor-like protein kinase PERK5 isoform X2 [Solanum lycopersicum]
Solyc00g014830.3.1	3542	2390.26273140468	5146.0992532319	1.10631007854233	3.3365778983843e-11	Up	5.37266870018239e-13	GO:0043231//intracellular membrane-bounded organelle;GO:0044425//membrane part;GO:0005739//mitochondrion;GO:0070469//respiratory chain	GO:0050136//NADH dehydrogenase (quinone) activity;GO:0000166//nucleotide binding;GO:0048037//cofactor binding;GO:0048038//quinone binding;GO:0051287//NAD binding;GO:0008137//NADH dehydrogenase (ubiquinone) activity	GO:0006091//generation of precursor metabolites and energy;GO:0055114//oxidation-reduction process;GO:0051234//establishment of localization	K03935//NADH dehydrogenase (ubiquinone) Fe-S protein 2 [EC:1.6.5.3 1.6.99.3]	gi|675895161|ref|YP_009049635.1|//NADH dehydrogenase subunit 7 (mitochondrion) [Capsicum annuum];gi|57014017|ref|YP_173488.1|//NADH dehydrogenase subunit 7 [Nicotiana tabacum];gi|11134048|sp|Q36450.1|NDUS2_NICSY//RecName: Full=NADH dehydrogenase [ubiquinone] iron-sulfur protein 2; AltName: Full=NADH dehydrogenase subunit 7 (mitochondrion) [Nicotiana sylvestris]
Solyc04g081710.2.1	712	3002.44360315445	3.03603651664527	-9.94973228855823	2.70468184185588e-98	Down	4.07025107878989e-102	NA	NA	NA	NA	NA
Solyc07g007060.2.1	1737	1668.20314328349	831.466025401907	-1.00456576205075	1.77359208161349e-09	Down	4.03028448944525e-11	GO:0044464//cell part;GO:0016021//integral component of membrane	GO:0015075//ion transmembrane transporter activity;GO:0008324//cation transmembrane transporter activity	GO:0098655//cation transmembrane transport;GO:0006811//ion transport	K14689//solute carrier family 30 (zinc transporter), member 2	gi|460394216|ref|XP_004242700.1|//PREDICTED: metal tolerance protein 1 [Solanum lycopersicum]
Solyc03g034170.3.1	1111	513.467886589297	1072.0322338053	1.06200233016439	9.1800812849082e-05	Up	6.95931670018436e-06	NA	NA	NA	NA	gi|460377570|ref|XP_004234564.1|//PREDICTED: uncharacterized protein LOC101255370 [Solanum lycopersicum]
Solyc02g078750.3.1	4319	84.5926972373513	192.913335219489	1.18934784566503	4.72339472033163e-05	Up	3.2360051865026e-06	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460376069|ref|XP_004233823.1|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 isoform X2 [Solanum lycopersicum]
Solyc01g006390.2.1	612	18.4572384310954	4.52669218677999	-2.02765760098114	0.0465991259240649	Down	0.0117742561966147	NA	NA	NA	NA	gi|350538675|ref|NP_001234866.1|//extensin-like protein precursor [Solanum lycopersicum]
Solyc03g032190.3.1	1689	81.241199972692	20.8430133141594	-1.96264768324404	0.0355695827641321	Down	0.00836647973819992	GO:0043231//intracellular membrane-bounded organelle	NA	GO:0009987//cellular process	K05868//cyclin B	gi|723680071|ref|XP_010317683.1|//PREDICTED: G2/mitotic-specific cyclin-2-like [Solanum lycopersicum]
Solyc03g119640.3.1	2561	173.085897043274	484.022728265882	1.483586614367	2.80138589487449e-11	Up	4.42656913411319e-13	NA	NA	NA	K03695//ATP-dependent Clp protease ATP-binding subunit ClpB	gi|723685593|ref|XP_010318605.1|//PREDICTED: aluminum-activated malate transporter 9 [Solanum lycopersicum]
Solyc02g024070.3.1	3786	444.539236065225	147.501766482303	-1.59157852798422	0.00359503982593998	Down	0.000519238445891031	GO:0043231//intracellular membrane-bounded organelle	GO:0003677//DNA binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0006351//transcription, DNA-templated	K09338//homeobox-leucine zipper protein	gi|723667880|ref|XP_010315636.1|//PREDICTED: homeobox-leucine zipper protein ATHB-14-like [Solanum lycopersicum]
Solyc01g009215.1.1	1089	1.08694790390166	4.8257575968753	2.15047265381725	0.0327371394999023	Up	0.00751919626211075	NA	NA	NA	K13993//HSP20 family protein	gi|460365987|ref|XP_004228875.1|//PREDICTED: uncharacterized protein LOC101250148 [Solanum lycopersicum]
Solyc09g098290.3.1	3603	193.006974315275	54.234420078463	-1.83137232109134	0.00318493535600588	Down	0.000448383299555079	GO:0016020//membrane	GO:0000166//nucleotide binding;GO:0004672//protein kinase activity;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K20718;K17422//large subunit ribosomal protein L41	gi|460405057|ref|XP_004247993.1|//PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 [Solanum lycopersicum]
Solyc02g090770.1.1	612	156.827107206412	73.2615580914057	-1.0980466585153	0.00168161211197532	Down	0.0002078290364123	NA	NA	NA	K09286//EREBP-like factor	gi|970009230|ref|XP_015065485.1|//PREDICTED: ethylene-responsive transcription factor ERF095-like [Solanum pennellii]
Solyc05g012870.1.1	1068	77.8495082253346	24.2925636920834	-1.68017317441475	0.000146347866702392	Down	1.18873229575043e-05	NA	NA	NA	NA	gi|460386824|ref|XP_004239096.1|//PREDICTED: uncharacterized protein LOC101256486 [Solanum lycopersicum]
Solyc01g091700.3.1	1362	207.308370089112	58.4612532089359	-1.82622570550468	0.00550083466817639	Down	0.00086196299446782	NA	NA	NA	NA	gi|460367964|ref|XP_004229840.1|//PREDICTED: F-box protein PP2-A13 [Solanum lycopersicum]
BGI_novel_G000116	1802	1667.06971122522	530.677140928225	-1.65140812352679	0.000919454402058074	Down	0.000101873333862341	NA	NA	NA	K00327//NADPH-ferrihemoprotein reductase [EC:1.6.2.4];K10527//enoyl-CoA hydratase/3-hydroxyacyl-CoA dehydrogenase [EC:4.2.1.17 1.1.1.35 1.1.1.211];K14802//phospholipid-transporting ATPase [EC:3.6.3.1]	gi|15144516|gb|AAK84483.1|//putative copia-like polyprotein [Solanum lycopersicum]
Solyc03g112580.3.1	3461	79.6021846508976	22.737372273348	-1.80774249192054	0.0024020094987266	Down	0.000318641290162152	GO:0031224//intrinsic component of membrane	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity;GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;GO:0004871//signal transducer activity	GO:0006464//cellular protein modification process	K00924;K17422//large subunit ribosomal protein L41	gi|460380991|ref|XP_004236236.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g26540 [Solanum lycopersicum]
Solyc05g007420.1.1	1152	111.315434882621	31.8442878303099	-1.80554713632334	0.000161826872040074	Down	1.34211417078421e-05	NA	NA	NA	K16221//transcription factor TCP21 (protein CCA1 HIKING EXPEDITION)	gi|350539966|ref|NP_001234594.1|//TCP transcription factor 23 [Solanum lycopersicum]
Solyc07g055300.3.1	2854	924.09634302568	372.201519361977	-1.3119593251521	4.32438406656589e-11	Down	7.19103746208473e-13	NA	GO:0019203//carbohydrate phosphatase activity;GO:0035251//UDP-glucosyltransferase activity	GO:0005991//trehalose metabolic process	K16055//trehalose 6-phosphate synthase/phosphatase [EC:2.4.1.15 3.1.3.12]	gi|460395394|ref|XP_004243268.1|//PREDICTED: probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 7 [Solanum lycopersicum]
Solyc06g051450.2.1	757	1.41382649145646	18.7600867794629	3.72998951666012	2.0624600654847e-05	Up	1.25780578109507e-06	NA	NA	NA	NA	NA
Solyc01g080500.2.1	1336	19336.9010413472	7900.25108651079	-1.29138619402778	1.03035492154163e-14	Down	8.99331609472002e-17	NA	NA	NA	NA	gi|460367232|ref|XP_004229479.1|//PREDICTED: uncharacterized protein LOC101268511 [Solanum lycopersicum]
Solyc10g055400.1.1	1357	279.094725644203	93.7914931813288	-1.57322587806852	1.01953696624286e-06	Down	4.19245261137487e-08	NA	NA	NA	NA	NA
Solyc11g008600.1.1	405	48.1799455939195	19.3371525512141	-1.31705739479748	0.0178509089937251	Down	0.00356749543170308	NA	NA	NA	NA	gi|970062151|ref|XP_015057959.1|//PREDICTED: uncharacterized protein LOC107004240 [Solanum pennellii]
Solyc02g080640.3.1	2200	6199.18253962775	13072.5001095982	1.07638519130983	3.79712821018552e-08	Up	1.13999560260649e-09	GO:0005623//cell	GO:0016667//oxidoreductase activity, acting on a sulfur group of donors;GO:0016671//oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	GO:0006790//sulfur compound metabolic process;GO:0019725//cellular homeostasis;GO:0019419//sulfate reduction;GO:0045454//cell redox homeostasis	K05907//adenylyl-sulfate reductase (glutathione) [EC:1.8.4.9]	gi|350538397|ref|NP_001233829.1|//adenylyl-sulfate reductase [Solanum lycopersicum]
Solyc01g096660.3.1	1800	1198.02036602378	2610.44055450444	1.12364087194563	5.12841332381418e-07	Up	1.96608471669174e-08	NA	NA	NA	NA	gi|350536853|ref|NP_001234524.1|//uncharacterized protein LOC543930 [Solanum lycopersicum]
Solyc06g067910.3.1	1386	63.9966703755344	22.4686377837014	-1.51008418615687	0.034005802956452	Down	0.00789502671347875	NA	NA	NA	K03097//casein kinase II subunit alpha [EC:2.7.11.1]	gi|460392216|ref|XP_004241713.1|//PREDICTED: uncharacterized protein LOC101268115 [Solanum lycopersicum]
Solyc08g068070.3.1	615	197.137855657379	437.741725696215	1.15087507032686	2.57826667234911e-10	Up	5.07311312881333e-12	NA	GO:0005506//iron ion binding	GO:0015669//gas transport	NA	gi|460399445|ref|XP_004245251.1|//PREDICTED: two-on-two hemoglobin-3 [Solanum lycopersicum]
Solyc07g061930.1.1	195	2.02802547052376	21.810941793995	3.42690438996475	0.00016888881117278	Up	1.41248994445858e-05	NA	NA	NA	NA	NA
Solyc01g021600.3.1	897	44.7608250999127	120.165844791028	1.42471835581866	0.0106748679122159	Up	0.00191087364658853	NA	NA	NA	K01870//isoleucyl-tRNA synthetase [EC:6.1.1.5];K19027//zinc finger FYVE domain-containing protein 26	gi|460364870|ref|XP_004228335.1|//PREDICTED: dirigent protein 22-like [Solanum lycopersicum]
Solyc04g016180.3.1	3214	1815.12158304549	829.26363871813	-1.13016344808928	0.000136304569744407	Down	1.09638513962958e-05	NA	GO:0016740//transferase activity	NA	K18134//protein O-GlcNAc transferase [EC:2.4.1.255]	gi|460381731|ref|XP_004236596.1|//PREDICTED: EGF domain-specific O-linked N-acetylglucosamine transferase-like [Solanum lycopersicum]
Solyc02g063000.3.1	1743	135.649077530441	25.4106938416306	-2.41637156275363	3.37405979069125e-07	Down	1.23512421984296e-08	NA	NA	NA	K12356//coniferyl-alcohol glucosyltransferase [EC:2.4.1.111]	gi|460375424|ref|XP_004233506.1|//PREDICTED: anthocyanidin 3-O-glucosyltransferase 5-like [Solanum lycopersicum]
Solyc02g088303.1.1	5829	552.143347073038	251.315207882728	-1.13554489119209	0.0116963968841881	Down	0.00213069803285323	NA	NA	NA	K18443//golgi-specific brefeldin A-resistance guanine nucleotide exchange factor 1	gi|723671346|ref|XP_010316243.1|//PREDICTED: LOW QUALITY PROTEIN: ARF guanine-nucleotide exchange factor GNOM-like [Solanum lycopersicum]
Solyc01g098060.1.1	459	75.5133892495016	225.065505361106	1.57554058332025	2.31544298068025e-05	Up	1.44780520462399e-06	NA	NA	NA	K12412//pheromone receptor transcription factor	gi|460370823|ref|XP_004231248.1|//PREDICTED: agamous-like MADS-box protein AGL61 [Solanum lycopersicum]
Solyc12g099190.1.1	528	21.4462672290657	56.5127923508511	1.39785091061899	0.00940694424772425	Up	0.00164391482432954	NA	NA	NA	K21232	gi|460415162|ref|XP_004252929.1|//PREDICTED: cell wall / vacuolar inhibitor of fructosidase 1-like [Solanum lycopersicum]
Solyc03g007320.3.1	2163	341.748738852145	148.694411804023	-1.20058558448833	0.0272031340373045	Down	0.00596872376619865	NA	GO:0005488//binding;GO:0016491//oxidoreductase activity	NA	K14948//polypyrimidine tract-binding protein 2;K14496//abscisic acid receptor PYR/PYL family;K08955//ATP-dependent metalloprotease [EC:3.4.24.-]	gi|460376782|ref|XP_004234175.1|//PREDICTED: abscisic acid receptor PYL8 [Solanum lycopersicum];gi|460376784|ref|XP_004234176.1|//PREDICTED: polypyrimidine tract-binding protein homolog 2 isoform X1 [Solanum lycopersicum]
Solyc03g007650.1.1	822	339.837847362564	158.124753593186	-1.10378330116179	0.000101294000069336	Down	7.76663552074138e-06	NA	GO:0005515//protein binding	GO:0044267//cellular protein metabolic process	K09510//DnaJ homolog subfamily B member 4	gi|849536176|ref|NP_001233892.2|//DnaJ like protein [Solanum lycopersicum]
Solyc06g076160.3.1	564	233.878900160147	61.473849299139	-1.92771698198377	1.06203465717676e-06	Down	4.41915098132994e-08	NA	GO:0005506//iron ion binding;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K20617	gi|460391230|ref|XP_004241226.1|//PREDICTED: cytochrome P450 71A9-like [Solanum lycopersicum]
Solyc06g050710.3.1	261	103.238109463572	21.9486287067376	-2.23377291574026	0.00560648756422899	Down	0.000882815209144044	NA	NA	NA	NA	gi|723706004|ref|XP_010322157.1|//PREDICTED: polyadenylate-binding protein-interacting protein 2 isoform X2 [Solanum lycopersicum]
Solyc01g087210.3.1	3605	2709.42357384301	1272.57832733909	-1.090231495753	0.0133415968449939	Down	0.00249163606992286	GO:0031224//intrinsic component of membrane	GO:0016759//cellulose synthase activity;GO:0046914//transition metal ion binding	GO:0045229//external encapsulating structure organization;GO:0009250//glucan biosynthetic process	K10999//cellulose synthase A [EC:2.4.1.12]	gi|460367538|ref|XP_004229630.1|//PREDICTED: cellulose synthase A catalytic subunit 3 [UDP-forming] [Solanum lycopersicum]
Solyc03g062745.1.1	1650	65.4707710733996	10.3193589413916	-2.66549761964921	0.00010837843825292	Down	8.39137795050825e-06	NA	NA	GO:0006397//mRNA processing	K12621//U6 snRNA-associated Sm-like protein LSm2	gi|13785213|emb|CAC37358.1|//putative membrane protein [Solanum tuberosum];gi|723681832|ref|XP_010317952.1|//PREDICTED: U6 snRNA-associated Sm-like protein LSm2 [Solanum lycopersicum];gi|723681513|ref|XP_010317893.1|//PREDICTED: uncharacterized protein LOC104646294 [Solanum lycopersicum]
Solyc05g007150.3.1	1111	4115.71396188072	1438.08048215187	-1.51699830137089	5.52369179363151e-12	Down	7.77223751248377e-14	GO:0031224//intrinsic component of membrane	NA	GO:0006810//transport	K15275//solute carrier family 35 (UDP-galactose transporter), member B1	gi|48209877|gb|AAT40483.1|//putative UDP-galactose transporter [Solanum demissum];gi|565395229|ref|XP_006363246.1|//PREDICTED: UDP-galactose/UDP-glucose transporter 3 [Solanum tuberosum];gi|460386179|ref|XP_004238777.1|//PREDICTED: UDP-galactose/UDP-glucose transporter 3-like [Solanum lycopersicum]
Solyc04g071630.3.1	1019	220.597682659254	106.998139397568	-1.04383192608387	0.000202609223023556	Down	1.73795721780928e-05	NA	NA	NA	NA	gi|723693908|ref|XP_010320097.1|//PREDICTED: uncharacterized protein At4g08330, chloroplastic-like [Solanum lycopersicum]
Solyc06g071070.1.1	786	6554.48452065913	2976.68532863629	-1.13877560428119	0.000119933041209155	Down	9.4213766006289e-06	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K00059//3-oxoacyl-[acyl-carrier protein] reductase [EC:1.1.1.100]	gi|460391916|ref|XP_004241564.1|//PREDICTED: short-chain type dehydrogenase/reductase-like [Solanum lycopersicum]
Solyc06g007170.3.1	1881	189.278070232431	37.4243068404005	-2.33845976943432	0.000357019833338454	Down	3.36737668239092e-05	NA	NA	NA	K16573//gamma-tubulin complex component 6;K01953//asparagine synthase (glutamine-hydrolysing) [EC:6.3.5.4]	gi|460389530|ref|XP_004240405.1|//PREDICTED: protein PMR5 [Solanum lycopersicum]
Solyc02g077310.3.1	365	7.89301044171937	1.19970354432395	-2.71789770858778	0.00456189487577922	Down	0.000689433096915167	NA	NA	NA	K07560//D-tyrosyl-tRNA(Tyr) deacylase [EC:3.1.-.-]	gi|970012210|ref|XP_015067047.1|//PREDICTED: D-tyrosyl-tRNA(Tyr) deacylase [Solanum pennellii]
Solyc06g070990.3.1	2282	458.635684777807	942.877735137421	1.03972209569526	0.00846753421525121	Up	0.00144852814434715	NA	NA	NA	K18835//WRKY transcription factor 2;K13424//WRKY transcription factor 33;K18834//WRKY transcription factor 1	gi|971563510|ref|XP_015167519.1|//PREDICTED: probable WRKY transcription factor 61 isoform X1 [Solanum tuberosum]
Solyc06g053260.1.1	390	590.282010246875	183.851922637783	-1.68286011044983	9.39485145213685e-06	Down	5.19579820716372e-07	NA	NA	NA	K14488//SAUR family protein	gi|525313974|ref|NP_001266178.1|//small auxin-up protein 58 [Solanum lycopersicum]
Solyc01g108975.1.1	4457	20.7570770315081	71.3134650743029	1.78057120462832	0.00558727051604812	Up	0.000879501122616454	NA	NA	NA	K17604//zinc finger SWIM domain-containing protein 3	gi|565398744|ref|XP_006364927.1|//PREDICTED: protein FAR-RED IMPAIRED RESPONSE 1 isoform X1 [Solanum tuberosum]
Solyc01g100240.3.1	2797	1339.05127229901	3644.21952785045	1.44439866719242	3.24537281091967e-16	Up	2.28323820783288e-18	GO:0005634//nucleus	GO:0043565//sequence-specific DNA binding;GO:0005516//calmodulin binding;GO:0003700//transcription factor activity, sequence-specific DNA binding	GO:0009789//positive regulation of abscisic acid-activated signaling pathway;GO:0006355//regulation of transcription, DNA-templated;GO:1902584//positive regulation of response to water deprivation;GO:0010224//response to UV-B;GO:0002229//defense response to oomycetes;GO:0009816//defense response to bacterium, incompatible interaction;GO:0071219//cellular response to molecule of bacterial origin;GO:0010112//regulation of systemic acquired resistance;GO:0080142//regulation of salicylic acid biosynthetic process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460368863|ref|XP_004230284.1|//PREDICTED: uncharacterized protein LOC101267354 [Solanum lycopersicum]
BGI_novel_G000253	2385	70.2530553243684	154.124385401168	1.13346226662451	0.000749640288445802	Up	7.98149742777133e-05	NA	NA	NA	NA	NA
Solyc03g114240.3.1	2153	126.266093519053	27.1587330873306	-2.21697919462773	0.001107568013262	Down	0.000126674445459612	NA	NA	NA	K06699//proteasome activator subunit 4;K12472//epidermal growth factor receptor substrate 15	gi|460380737|ref|XP_004236111.1|//PREDICTED: probable polygalacturonase non-catalytic subunit JP650 [Solanum lycopersicum]
Solyc03g120890.3.1	2152	77.2622221682736	33.0116562159548	-1.22678765075825	0.0476516445398771	Down	0.0121370065287798	NA	NA	NA	K19027//zinc finger FYVE domain-containing protein 26;K17895//GATA-binding protein 3	gi|971542834|ref|XP_006343049.2|//PREDICTED: GATA transcription factor 12-like [Solanum tuberosum]
Solyc02g067350.3.1	2601	25.4304612451495	53.4361628411827	1.07125878492969	0.0212266374441748	Up	0.00440051318434321	NA	NA	NA	NA	gi|723676888|ref|XP_004233361.2|//PREDICTED: uncharacterized protein LOC101267768 isoform X1 [Solanum lycopersicum]
Solyc09g065890.3.1	1475	3879.0263935208	1863.9548335315	-1.0573276905178	9.41633056160253e-07	Down	3.81896326012322e-08	NA	NA	NA	K16818//phospholipase A1 [EC:3.1.1.32]	gi|723731079|ref|XP_010326538.1|//PREDICTED: LOW QUALITY PROTEIN: phospholipase A1-Igamma2, chloroplastic-like [Solanum lycopersicum]
Solyc03g020060.3.1	828	7.11503368611062	22.378916672022	1.6531977071015	0.0240914495605368	Up	0.0051364275643176	NA	GO:0030414//peptidase inhibitor activity	NA	NA	gi|723684419|ref|XP_010317560.1|//PREDICTED: proteinase inhibitor type-2 P303.51-like [Solanum lycopersicum]
Solyc02g084120.2.1	7261	726.057002808431	5280.66658276683	2.86256532971469	5.63258917769033e-15	Up	4.59846445281716e-17	NA	NA	NA	K08739//DNA mismatch repair protein MLH3;K05658//ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:3.6.3.44];K03544//ATP-dependent Clp protease ATP-binding subunit ClpX	gi|971582564|ref|XP_006365142.2|//PREDICTED: uncharacterized protein LOC102600784 [Solanum tuberosum];gi|723672593|ref|XP_010316416.1|//PREDICTED: uncharacterized protein LOC104645754 isoform X2 [Solanum lycopersicum]
Solyc06g009480.2.1	1066	62.1148661857153	9.94954223904868	-2.64223653899645	9.97629940793341e-07	Down	4.08735517503367e-08	GO:0043231//intracellular membrane-bounded organelle	GO:0003676//nucleic acid binding	NA	K09422//myb proto-oncogene protein, plant	gi|970033730|ref|XP_015078167.1|//PREDICTED: transcription factor MYB108-like [Solanum pennellii];gi|723704788|ref|XP_004240646.2|//PREDICTED: transcription factor MYB108-like [Solanum lycopersicum]
Solyc01g098540.3.1	1947	150.221528860661	433.713239114079	1.52964989601116	1.82060830475604e-07	Up	6.27418061383195e-09	NA	NA	NA	K11252//histone H2B	gi|723662465|ref|XP_010312480.1|//PREDICTED: uncharacterized protein LOC101255736 isoform X3 [Solanum lycopersicum];gi|723662459|ref|XP_010312476.1|//PREDICTED: uncharacterized protein LOC101255736 isoform X1 [Solanum lycopersicum]
Solyc08g062490.3.1	1074	1054.48239411647	3631.03519982199	1.78384590815639	1.60514705695188e-42	Up	1.32856415549064e-45	NA	NA	NA	K10268//F-box and leucine-rich repeat protein 2/20;K13424//WRKY transcription factor 33;K18834//WRKY transcription factor 1	gi|460399068|ref|XP_004245065.1|//PREDICTED: probable WRKY transcription factor 75 [Solanum lycopersicum]
Solyc05g052420.2.1	681	14.1180817776463	3.38778675669957	-2.05912911049376	0.0211066312021985	Down	0.00437061317294584	NA	NA	NA	K14496//abscisic acid receptor PYR/PYL family	gi|460388600|ref|XP_004239955.1|//PREDICTED: abscisic acid receptor PYL4-like [Solanum lycopersicum]
Solyc07g045185.1.1	1232	312.678859178301	688.090306843371	1.13791624141284	0.000489813617869975	Up	4.86865153654053e-05	GO:0005622//intracellular	GO:0008270//zinc ion binding	NA	K12135//zinc finger protein CONSTANS;K12131//pseudo-response regulator 3;K19720//collagen, type III, alpha	gi|460396063|ref|XP_004243599.1|//PREDICTED: zinc finger protein CONSTANS-LIKE 10 [Solanum lycopersicum]
Solyc01g087850.2.1	3108	558.853632231606	102.81251902956	-2.44245453450195	2.88798799404031e-08	Down	8.47490833465554e-10	NA	GO:0004175//endopeptidase activity;GO:0005515//protein binding	GO:0044092//negative regulation of molecular function;GO:0019538//protein metabolic process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K08653//membrane-bound transcription factor site-1 protease [EC:3.4.21.112];K13199//plasminogen activator inhibitor 1 RNA-binding protein;K12663//Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase [EC:5.3.3.-];K01183//chitinase [EC:3.2.1.14]	gi|350536739|ref|NP_001234774.1|//subtilisin-like protease precursor [Solanum lycopersicum]
Solyc07g007400.3.1	1353	2.68289329767671	41.5589825462185	3.9532987514756	7.05852594959047e-06	Up	3.7343002578073e-07	NA	NA	NA	NA	gi|723712626|ref|XP_010323274.1|//PREDICTED: F-box/LRR-repeat protein 14-like isoform X3 [Solanum lycopersicum]
Solyc01g006130.3.1	1127	610.686039308354	1285.56968918525	1.07390504935639	3.66604487380339e-08	Up	1.09650326360937e-09	NA	GO:0005515//protein binding	GO:0044267//cellular protein metabolic process	K12603//CCR4-NOT transcription complex subunit 6 [EC:3.1.13.4]	gi|460365607|ref|XP_004228692.1|//PREDICTED: uncharacterized protein LOC101267437 [Solanum lycopersicum]
Solyc10g006150.3.1	1631	77.4102248803858	12.850967594333	-2.59064715107334	1.2211084252438e-06	Down	5.16834830097543e-08	NA	NA	NA	NA	gi|723734826|ref|XP_010327190.1|//PREDICTED: uncharacterized protein LOC101252631 [Solanum lycopersicum]
Solyc07g006670.1.1	1386	14.1377114341013	3.25299556925096	-2.11970783788552	0.0157070536491431	Down	0.00303740616089523	NA	NA	NA	K13065//shikimate O-hydroxycinnamoyltransferase [EC:2.3.1.133]	gi|460394866|ref|XP_004243011.1|//PREDICTED: vinorine synthase-like [Solanum lycopersicum]
Solyc02g080400.2.1	7137	177.650816079113	52.9998962314371	-1.74498287589277	0.0310648752568804	Down	0.00702270074005338	NA	NA	NA	K16743//abnormal spindle-like microcephaly-associated protein	gi|723673917|ref|XP_010316597.1|//PREDICTED: abnormal spindle-like microcephaly-associated protein homolog isoform X1 [Solanum lycopersicum]
Solyc03g118090.3.1	3066	467.231014167721	1119.31620109663	1.26040970118464	8.29661559306733e-15	Up	7.08552197000107e-17	NA	NA	NA	K14684//solute carrier family 25 (mitochondrial phosphate transporter), member 23/24/25/41	gi|460380213|ref|XP_004235852.1|//PREDICTED: calcium-binding mitochondrial carrier protein SCaMC-1-like [Solanum lycopersicum];gi|697191528|ref|XP_009604830.1|//PREDICTED: calcium-binding mitochondrial carrier protein SCaMC-2-B-like [Nicotiana tomentosiformis]
Solyc03g111160.3.1	1525	184.350229814255	381.695325687011	1.04997230422394	8.3770648494221e-06	Up	4.56042619906463e-07	NA	GO:0004721//phosphoprotein phosphatase activity	GO:0006464//cellular protein modification process;GO:0006796//phosphate-containing compound metabolic process	K14165//atypical dual specificity phosphatase [EC:3.1.3.16 3.1.3.48];K05305//fucokinase [EC:2.7.1.52];K07200//5'-AMP-activated protein kinase, regulatory gamma subunit	gi|460381206|ref|XP_004236343.1|//PREDICTED: phosphoglucan phosphatase DSP4, amyloplastic-like [Solanum lycopersicum]
Solyc09g064530.3.1	3049	247.290287216125	102.486664056401	-1.27076938319025	2.46267065518661e-06	Down	1.12385985881917e-07	NA	NA	NA	K14484//auxin-responsive protein IAA	gi|525313469|ref|NP_001266065.1|//IAA12 [Solanum lycopersicum]
Solyc08g079420.3.1	1597	2592.37891656876	785.726033184379	-1.72217833937136	3.9927811490125e-09	Down	9.74911574758884e-11	NA	NA	NA	K20770;K20562//null;K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30]	gi|460400391|ref|XP_004245718.1|//PREDICTED: ferruginol synthase-like [Solanum lycopersicum]
Solyc11g032133.1.1	3510	158.049416735544	615.033631542794	1.96028959156068	7.99322397974334e-11	Up	1.39836311158038e-12	GO:0005622//intracellular	GO:0010181//FMN binding;GO:0003959//NADPH dehydrogenase activity	GO:0055114//oxidation-reduction process	K05894//12-oxophytodienoic acid reductase [EC:1.3.1.42]	gi|971564890|ref|XP_015167893.1|//PREDICTED: uncharacterized protein LOC107062130 [Solanum tuberosum];gi|460410474|ref|XP_004250653.1|//PREDICTED: 12-oxophytodienoate reductase 1-like isoform X1 [Solanum lycopersicum];gi|723743545|ref|XP_010312987.1|//PREDICTED: putative 12-oxophytodienoate reductase-like protein 1 isoform X2 [Solanum lycopersicum]
Solyc08g008080.1.1	477	27.3260168851277	56.2768206262899	1.04226564142725	0.0222575455237713	Up	0.00467173989755907	NA	NA	NA	K16281//RING-H2 zinc finger protein RHA1	gi|460398132|ref|XP_004244617.1|//PREDICTED: E3 ubiquitin-protein ligase RHA1B-like [Solanum lycopersicum]
Solyc07g007620.3.1	2817	231.945317389012	112.320685640944	-1.04616107329076	0.00165892687549635	Down	0.000204276435797576	NA	NA	NA	K03715//1,2-diacylglycerol 3-beta-galactosyltransferase [EC:2.4.1.46]	gi|460394288|ref|XP_004242736.1|//PREDICTED: monogalactosyldiacylglycerol synthase 2, chloroplastic [Solanum lycopersicum]
Solyc03g020040.3.1	806	172.36873778463	517.790062686886	1.58686913853185	0.00323660361945155	Up	0.000456530482036662	NA	NA	NA	NA	gi|970017473|ref|XP_015069874.1|//PREDICTED: proteinase inhibitor type-2-like [Solanum pennellii]
Solyc09g007130.3.1	1694	3170.07772037814	1013.226572755	-1.64556139256144	2.94025860798211e-08	Down	8.63936031916491e-10	GO:0044424//intracellular part	GO:0016742//hydroxymethyl-, formyl- and related transferase activity	GO:0009108//coenzyme biosynthetic process;GO:0006730//one-carbon metabolic process	K00606//3-methyl-2-oxobutanoate hydroxymethyltransferase [EC:2.1.2.11]	gi|460402428|ref|XP_004246714.1|//PREDICTED: 3-methyl-2-oxobutanoate hydroxymethyltransferase 1, mitochondrial-like [Solanum lycopersicum]
Solyc01g095960.3.1	1916	705.397054289913	94.8515875383093	-2.89469172569032	0.000450975679813527	Down	4.40965309193137e-05	NA	NA	NA	K15406//wax-ester synthase / diacylglycerol O-acyltransferase [EC:2.3.1.75 2.3.1.20]	gi|460370771|ref|XP_004231223.1|//PREDICTED: O-acyltransferase WSD1-like [Solanum lycopersicum]
Solyc04g072895.1.1	1467	371.863783229428	938.912637328602	1.33621667917981	1.60166442668291e-06	Up	6.97790596726412e-08	NA	NA	NA	K18643//katanin p80 WD40 repeat-containing subunit B1;K14963//COMPASS component SWD3	gi|565374945|ref|XP_006354002.1|//PREDICTED: uncharacterized WD repeat-containing protein C2A9.03-like [Solanum tuberosum];gi|460384385|ref|XP_004237892.1|//PREDICTED: uncharacterized WD repeat-containing protein C2A9.03 [Solanum lycopersicum]
Solyc03g098240.3.1	2318	153.659973016781	522.263439839413	1.76503630841433	2.24349117507441e-05	Up	1.39690665716635e-06	GO:0009506//plasmodesma	GO:0016831//carboxy-lyase activity;GO:0004351//glutamate decarboxylase activity;GO:0005515//protein binding;GO:0048037//cofactor binding;GO:0005516//calmodulin binding;GO:0030170//pyridoxal phosphate binding	GO:0009064//glutamine family amino acid metabolic process;GO:0006536//glutamate metabolic process	K01580//glutamate decarboxylase [EC:4.1.1.15]	gi|922959877|ref|NP_001234041.2|//glutamate decarboxylase [Solanum lycopersicum]
Solyc02g067080.3.1	1443	1502.14903496313	450.177561385903	-1.73846190209678	4.621858664522e-06	Down	2.2987573944688e-07	NA	GO:0016614//oxidoreductase activity, acting on CH-OH group of donors;GO:0000166//nucleotide binding	GO:0008152//metabolic process	K00012//UDPglucose 6-dehydrogenase [EC:1.1.1.22]	gi|460375158|ref|XP_004233374.1|//PREDICTED: UDP-glucose 6-dehydrogenase 1 [Solanum lycopersicum]
Solyc09g098580.3.1	3722	472.28289159221	1073.01872314675	1.18395206991583	3.65255951379956e-10	Up	7.35184100783583e-12	NA	NA	NA	NA	gi|460405017|ref|XP_004247974.1|//PREDICTED: putative GTP diphosphokinase RSH1, chloroplastic isoform X2 [Solanum lycopersicum]
Solyc03g025937.1.1	1694	311.741502148634	117.01140328042	-1.41370110005855	5.57249380256016e-06	Down	2.84075587000339e-07	NA	NA	NA	K10269//F-box and leucine-rich repeat protein 3;K10268//F-box and leucine-rich repeat protein 2/20;K10273//F-box and leucine-rich repeat protein 7	gi|460377195|ref|XP_004234380.1|//PREDICTED: F-box/LRR-repeat protein At3g48880 [Solanum lycopersicum];gi|723679557|ref|XP_010317593.1|//PREDICTED: uncharacterized protein LOC101247404 isoform X2 [Solanum lycopersicum]
Solyc05g013290.1.1	963	139.473452851453	16.0825759690996	-3.1164201393167	1.08946440690999e-08	Down	2.94128185371812e-10	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13435	gi|998071370|ref|NP_001307197.1|//serine/threonine protein kinase Fen [Solanum lycopersicum]
Solyc05g013970.3.1	2994	864.728050668308	367.700517807322	-1.2337152810448	0.000259448036575368	Down	2.31336285434019e-05	NA	GO:1901363//heterocyclic compound binding;GO:0097159//organic cyclic compound binding	NA	K14398//cleavage and polyadenylation specificity factor subunit 6/7	gi|723699017|ref|XP_010320954.1|//PREDICTED: LOW QUALITY PROTEIN: cleavage and polyadenylation specificity factor subunit 6 [Solanum lycopersicum]
Solyc04g078910.3.1	1970	481.811158516985	1176.504037262	1.28796656008109	1.46354427949291e-10	Up	2.7200559596294e-12	GO:0005737//cytoplasm	GO:0015036//disulfide oxidoreductase activity;GO:0015035//protein disulfide oxidoreductase activity;GO:0016671//oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor	GO:0000103//sulfate assimilation;GO:0006457//protein folding;GO:0055114//oxidation-reduction process;GO:0045454//cell redox homeostasis;GO:0006662//glycerol ether metabolic process;GO:0018904//ether metabolic process;GO:0019725//cellular homeostasis;GO:0034599//cellular response to oxidative stress	K03671//thioredoxin 1	gi|723695350|ref|XP_010320331.1|//PREDICTED: thioredoxin-like 4, chloroplastic [Solanum lycopersicum]
Solyc06g083230.3.1	3261	302.265521877096	44.2028744803797	-2.77360433118043	2.59455578140312e-12	Down	3.45550318516443e-14	NA	GO:0003933//GTP cyclohydrolase activity	NA	K01495//GTP cyclohydrolase I [EC:3.5.4.16]	gi|350534446|ref|NP_001234141.1|//GTP cyclohydrolase 1 [Solanum lycopersicum]
Solyc12g096500.2.1	1413	1585.79089961092	650.560258602505	-1.28544795274317	2.07072804993156e-05	Down	1.26440617947288e-06	NA	NA	NA	K12135//zinc finger protein CONSTANS	gi|460415413|ref|XP_004253053.1|//PREDICTED: zinc finger protein CONSTANS-LIKE 4-like [Solanum lycopersicum]
Solyc06g073037.1.1	2524	22.7849029087382	4.24329426551461	-2.4248215871962	0.0112004052681942	Down	0.0020171685484893	NA	NA	NA	NA	gi|731424603|ref|XP_010662940.1|//PREDICTED: transcription repressor OFP10-like [Vitis vinifera]
Solyc01g005470.3.1	867	9507.87664772461	4152.13901486297	-1.19526843995055	4.27082842493814e-06	Down	2.10167177570319e-07	NA	NA	NA	K14006//protein transport protein SEC23	gi|460365665|ref|XP_004228721.1|//PREDICTED: protein PLANT CADMIUM RESISTANCE 2-like [Solanum lycopersicum]
Solyc02g087880.3.1	3151	363.256342825448	89.751024767526	-2.01698767232293	0.046739642728784	Down	0.0118291037109304	GO:0032991//macromolecular complex;GO:0015630//microtubule cytoskeleton	GO:0032561//guanyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity	GO:0007017//microtubule-based process;GO:0009207//purine ribonucleoside triphosphate catabolic process;GO:0043623//cellular protein complex assembly	K07374//tubulin alpha	gi|697145354|ref|XP_009626810.1|//PREDICTED: tubulin alpha chain-like [Nicotiana tomentosiformis]
Solyc06g060560.3.1	1033	163.747789122509	59.964856497615	-1.44928629225951	0.00697100343401238	Down	0.00114924518614907	NA	NA	NA	NA	gi|460392820|ref|XP_004242011.1|//PREDICTED: uncharacterized protein LOC101256008 [Solanum lycopersicum]
Solyc09g018890.3.1	1580	101.087647047596	253.556113710218	1.32669835080936	0.00769052140740286	Up	0.00129263963944523	NA	NA	NA	NA	gi|460401479|ref|XP_004246251.1|//PREDICTED: uncharacterized protein LOC101248905 [Solanum lycopersicum]
Solyc01g098950.2.1	1016	5.37782668299268	25.0977142270511	2.22246081100002	0.00323992768817182	Up	0.000457222300915444	NA	GO:0016620//oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor;GO:0000166//nucleotide binding	GO:0019318//hexose metabolic process	K00134//glyceraldehyde 3-phosphate dehydrogenase [EC:1.2.1.12]	gi|970027111|ref|XP_015074866.1|//PREDICTED: glyceraldehyde-3-phosphate dehydrogenase GAPC1, cytosolic-like [Solanum pennellii]
Solyc03g007090.1.1	1437	123.346170899592	47.8750977023496	-1.36536559361751	0.0121683168012499	Down	0.00222994248077081	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K12812//ATP-dependent RNA helicase UAP56/SUB2 [EC:3.6.4.13];K18081//myotubularin-related protein 1/2 [EC:3.1.3.64 3.1.3.95]	gi|460376744|ref|XP_004234157.1|//PREDICTED: uncharacterized protein LOC101245820 [Solanum lycopersicum]
Solyc01g111730.3.1	2008	524.10657766796	1059.04271183252	1.01482865488255	1.98547100338105e-09	Up	4.5491039919453e-11	GO:0043234//protein complex	GO:0043169//cation binding;GO:0004721//phosphoprotein phosphatase activity	GO:0006464//cellular protein modification process	K01102//pyruvate dehydrogenase phosphatase [EC:3.1.3.43]	gi|460370431|ref|XP_004231056.1|//PREDICTED: probable protein phosphatase 2C 46 [Solanum lycopersicum]
Solyc07g065590.3.1	1061	56.6175512407968	186.049678440651	1.71636663911267	2.43431033437379e-07	Up	8.5814476422432e-09	NA	NA	NA	K06210//nicotinamide mononucleotide adenylyltransferase [EC:2.7.7.1 2.7.7.18]	gi|723718003|ref|XP_010324255.1|//PREDICTED: nicotinamide mononucleotide adenylyltransferase isoform X1 [Solanum lycopersicum];gi|460396998|ref|XP_004244056.1|//PREDICTED: nicotinamide mononucleotide adenylyltransferase isoform X2 [Solanum lycopersicum]
BGI_novel_G000441	370	10.2402520553988	2.63087276471603	-1.96063784339995	0.0419285778446843	Down	0.010256569343346	NA	GO:0003964//RNA-directed DNA polymerase activity;GO:0008270//zinc ion binding;GO:0004519//endonuclease activity;GO:0004190//aspartic-type endopeptidase activity;GO:0003676//nucleic acid binding	GO:0015074//DNA integration;GO:0006508//proteolysis;GO:0090305//nucleic acid phosphodiester bond hydrolysis;GO:0006278//RNA-dependent DNA replication	K09422//myb proto-oncogene protein, plant;K14760//acyl-activating enzyme 14 [EC:6.2.1.26];K15015//solute carrier family 32 (vesicular inhibitory amino acid transporter);K05658//ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:3.6.3.44];K03644//lipoyl synthase [EC:2.8.1.8]	gi|130582|sp|P10978.1|POLX_TOBAC//RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Includes: RecName: Full=Protease; Includes: RecName: Full=Reverse transcriptase; Includes: RecName: Full=Endonuclease
Solyc11g011340.2.1	1634	6300.42786309507	2124.74218978833	-1.5681620062663	1.48109525467582e-06	Down	6.39690501267057e-08	NA	GO:0046914//transition metal ion binding;GO:0008270//zinc ion binding;GO:0003824//catalytic activity;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process;GO:0055114//oxidation-reduction process	K00083//cinnamyl-alcohol dehydrogenase [EC:1.1.1.195]	gi|955471901|ref|NP_001304266.1|//8-hydroxygeraniol dehydrogenase [Solanum lycopersicum]
Solyc10g080090.2.1	3058	718.705034665674	324.222083305386	-1.1484174338872	4.20085843633327e-05	Down	2.82744008374726e-06	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K00872//homoserine kinase [EC:2.7.1.39];K20098//DNA excision repair protein ERCC-6-like 2 [EC:3.6.4.-];K10398//kinesin family member 11;K05658//ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:3.6.3.44]	gi|723738439|ref|XP_010312124.1|//PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER-like [Solanum lycopersicum]
Solyc09g018430.3.1	1123	25.0125043262555	5.59228634993413	-2.16113937154475	0.0148751622549491	Down	0.0028412958354918	NA	NA	NA	K08059//interferon, gamma-inducible protein 30	gi|723726666|ref|XP_010325743.1|//PREDICTED: gamma-interferon-inducible lysosomal thiol reductase isoform X1 [Solanum lycopersicum];gi|723726674|ref|XP_010325745.1|//PREDICTED: gamma-interferon-inducible lysosomal thiol reductase isoform X4 [Solanum lycopersicum]
Solyc01g066260.2.1	542	119.939572856005	39.1807827648578	-1.61408961443798	0.00624842934587225	Down	0.00100637795446498	NA	NA	NA	NA	NA
Solyc08g080170.3.1	2780	1185.3618126615	482.204423080777	-1.29761069642564	2.29264266863883e-10	Down	4.46797931660991e-12	NA	GO:0016747//transferase activity, transferring acyl groups other than amino-acyl groups;GO:0046912//transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer	GO:0006720//isoprenoid metabolic process	K01641//hydroxymethylglutaryl-CoA synthase [EC:2.3.3.10]	gi|460400275|ref|XP_004245661.1|//PREDICTED: hydroxymethylglutaryl-CoA synthase [Solanum lycopersicum];gi|970047473|ref|XP_015085265.1|//PREDICTED: hydroxymethylglutaryl-CoA synthase [Solanum pennellii]
Solyc02g077600.3.1	4272	379.226427393533	147.741272369671	-1.3599865982272	2.46236859083084e-05	Down	1.55264475479025e-06	NA	NA	NA	K11498//centromeric protein E;K20283//golgin subfamily A member 4;K09291//nucleoprotein TPR;K10866//DNA repair protein RAD50 [EC:3.6.-.-];K20478//golgin subfamily B member 1	gi|460374249|ref|XP_004232924.1|//PREDICTED: guanylate-binding protein 4 [Solanum lycopersicum]
Solyc03g116440.2.1	2998	49.4105129109715	7.94424382500806	-2.6368362240043	0.000528483679978473	Down	5.31863748661556e-05	NA	NA	NA	NA	gi|460381456|ref|XP_004236465.1|//PREDICTED: PHD finger protein At2g01810-like [Solanum lycopersicum]
Solyc06g065560.2.1	3441	7724.46326869104	3430.83149413614	-1.17087642197208	3.89705509996592e-09	Down	9.41275159585447e-11	GO:0016021//integral component of membrane	GO:0016747//transferase activity, transferring acyl groups other than amino-acyl groups	GO:0006633//fatty acid biosynthetic process	K15397//3-ketoacyl-CoA synthase [EC:2.3.1.199]	gi|460392410|ref|XP_004241809.1|//PREDICTED: 3-ketoacyl-CoA synthase 11-like [Solanum lycopersicum];gi|613433849|gb|AHX25587.1|//3-ketoacyl-CoA synthase 11 [Nicotiana tabacum]
Solyc12g009720.2.1	1959	104.882173337902	33.8008111515601	-1.63363971227117	0.00128661056703078	Down	0.000151653532976201	NA	NA	NA	K19613//leucine-rich repeat protein SHOC2;K10406//kinesin family member C2/C3	gi|723749424|ref|XP_010314065.1|//PREDICTED: receptor-like protein 12 [Solanum lycopersicum]
BGI_novel_G000205	1028	1930.5882981104	474.829097606837	-2.02356028803438	4.15706731868199e-05	Down	2.7939803685993e-06	NA	NA	NA	NA	NA
Solyc09g005120.3.1	2261	1429.64449783768	122.158374395888	-3.54883177018663	1.38768033390415e-33	Down	1.93168443771459e-36	NA	NA	NA	K03686//molecular chaperone DnaJ;K10863//aprataxin [EC:3.-.-.-]	gi|460402555|ref|XP_004246777.1|//PREDICTED: dnaJ protein ERDJ3A [Solanum lycopersicum]
Solyc04g016390.2.1	1106	40.2777653414205	129.435104092535	1.68417339546602	3.24355812476178e-07	Up	1.1836912644917e-08	GO:0030529//intracellular ribonucleoprotein complex	NA	NA	K02913//large subunit ribosomal protein L33	gi|460381703|ref|XP_004236583.1|//PREDICTED: 54S ribosomal protein L39, mitochondrial-like [Solanum lycopersicum]
Solyc03g071650.2.1	6546	209.856081512927	467.331628152189	1.15504640714351	1.34937648282203e-09	Up	2.99522996563206e-11	NA	NA	NA	K16573//gamma-tubulin complex component 6	gi|723681159|ref|XP_010317986.1|//PREDICTED: protein trichome birefringence-like 10 [Solanum lycopersicum]
Solyc05g007580.1.1	894	448.975941922443	176.159326670073	-1.3497572815384	4.1798426563694e-07	Down	1.55839882334916e-08	NA	NA	NA	NA	gi|460386227|ref|XP_004238801.1|//PREDICTED: zinc-finger homeodomain protein 10-like [Solanum lycopersicum]
BGI_novel_G000383	2838	51.6147883094309	14.3745032386093	-1.84427237627387	0.00526983008211642	Down	0.000818450628303209	NA	NA	NA	K02261//cytochrome c oxidase subunit 2	gi|723735484|ref|XP_010327299.1|//PREDICTED: uncharacterized protein LOC104649534 [Solanum lycopersicum]
Solyc01g110360.3.1	1640	4488.77435837352	10299.4591470056	1.1981750976825	7.28081361892703e-11	Up	1.26003546452462e-12	NA	GO:0004332//fructose-bisphosphate aldolase activity;GO:0016832//aldehyde-lyase activity	GO:0006007//glucose catabolic process;GO:0006096//glycolytic process	K01623//fructose-bisphosphate aldolase, class I [EC:4.1.2.13]	gi|460370090|ref|XP_004230887.1|//PREDICTED: fructose-bisphosphate aldolase 1, chloroplastic [Solanum lycopersicum]
Solyc01g014270.3.1	998	89.1732849249949	328.030755719013	1.87914761768292	2.20017103440229e-18	Up	1.24163150925637e-20	NA	NA	NA	NA	NA
Solyc01g079820.3.1	779	703.676225503021	1439.84941812864	1.03293426421686	0.000235546063029196	Up	2.07720079661564e-05	NA	GO:0016209//antioxidant activity;GO:0016705//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	GO:0019725//cellular homeostasis;GO:0008152//metabolic process	K03386//peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15];K11187//peroxiredoxin 5, atypical 2-Cys peroxiredoxin [EC:1.11.1.15]	gi|460367118|ref|XP_004229422.1|//PREDICTED: peroxiredoxin-2F, mitochondrial [Solanum lycopersicum]
Solyc06g065970.1.1	381	130.408343586046	10.2043336924954	-3.67578228922742	1.44730458375214e-05	Down	8.43444243879635e-07	NA	NA	NA	K02883//large subunit ribosomal protein L18e;K11855//ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12]	gi|460392356|ref|XP_004241782.1|//PREDICTED: 14 kDa proline-rich protein DC2.15-like [Solanum lycopersicum]
Solyc02g084330.3.1	737	22.3365521736722	88.9137518729432	1.993000059754	0.00879919618468558	Up	0.00151519642352543	NA	NA	NA	K08739//DNA mismatch repair protein MLH3	gi|565347670|ref|XP_006340847.1|//PREDICTED: DNA mismatch repair protein MLH3 isoform X1 [Solanum tuberosum]
Solyc06g007790.1.1	1002	13.8418628511798	37.552024060308	1.4398525560133	0.0322949270264115	Up	0.00738968194787941	NA	NA	NA	NA	gi|723704033|ref|XP_010321793.1|//PREDICTED: uncharacterized protein LOC104647773 [Solanum lycopersicum]
Solyc10g007670.3.1	767	275.2984426904	582.429054481412	1.08108587728168	0.000236126753070994	Up	2.08321006753755e-05	NA	NA	NA	NA	gi|460405513|ref|XP_004248220.1|//PREDICTED: uncharacterized protein LOC101254243 [Solanum lycopersicum]
Solyc02g090267.1.1	969	37.3806925055391	100.460569020354	1.42626415028044	0.0008385780731933	Up	9.09248309609891e-05	NA	NA	NA	K20556;K20618//null	gi|565342168|ref|XP_006338233.1|//PREDICTED: geraniol 8-hydroxylase-like [Solanum tuberosum]
Solyc05g054380.2.1	835	977.798536339958	438.824875232656	-1.15589193709799	5.76145318669055e-08	Down	1.78826142927754e-09	NA	NA	GO:0006950//response to stress	K14496//abscisic acid receptor PYR/PYL family	gi|460388284|ref|XP_004239798.1|//PREDICTED: pathogenesis-related protein STH-2-like [Solanum lycopersicum]
Solyc12g008380.1.1	654	75.5463174246483	160.071185478614	1.08328029401641	0.0188361944748449	Up	0.00380763254000532	NA	NA	NA	K03350//anaphase-promoting complex subunit 3	gi|460412486|ref|XP_004251629.1|//PREDICTED: uncharacterized protein LOC101257239 [Solanum lycopersicum]
Solyc07g049610.1.1	1464	532.595456575533	226.765307106231	-1.23184018256258	0.000466073902888059	Down	4.59586041937398e-05	NA	GO:0016740//transferase activity	NA	K20888;K16911//ATP-dependent RNA helicase DDX21 [EC:3.6.4.13]	gi|460395863|ref|XP_004243499.1|//PREDICTED: xyloglucan galactosyltransferase KATAMARI1-like [Solanum lycopersicum]
Solyc03g019880.3.1	646	815.738006473143	2308.21170660366	1.50059777631592	2.42340212972467e-19	Up	1.23996497231962e-21	NA	NA	NA	NA	gi|460377080|ref|XP_004234323.1|//PREDICTED: UPF0426 protein At1g28150, chloroplastic [Solanum lycopersicum]
Solyc09g074505.1.1	2045	77.3506227444806	24.9515795292436	-1.63228176025893	0.000444413934793592	Down	4.33378825803232e-05	NA	NA	NA	K19600//tubby-related protein 1	gi|460403973|ref|XP_004247460.1|//PREDICTED: tubby-like F-box protein 3 [Solanum lycopersicum]
Solyc07g065410.1.1	306	26.2657849839445	72.5421871972537	1.4656355424412	0.0012895773464834	Up	0.000152197296309948	NA	NA	NA	NA	gi|970040622|ref|XP_015081698.1|//PREDICTED: uncharacterized protein LOC107025426 [Solanum pennellii]
Solyc02g078140.3.1	5082	3081.70730770839	1513.49449576795	-1.02584641663095	0.000116067504029369	Down	9.05658402396207e-06	NA	GO:0005524//ATP binding;GO:0004672//protein kinase activity	GO:0006468//protein phosphorylation	K04427//mitogen-activated protein kinase kinase kinase 7 [EC:2.7.11.25];K04424//sterile alpha motif and leucine zipper containing kinase AZK [EC:2.7.11.25];K17535//serine/threonine-protein kinase TNNI3K [EC:2.7.11.1];K04365//B-Raf proto-oncogene serine/threonine-protein kinase [EC:2.7.11.1]	gi|460374169|ref|XP_004232884.1|//PREDICTED: serine/threonine-protein kinase HT1-like [Solanum lycopersicum]
Solyc08g008140.3.1	736	27.0256407703799	95.9703687418967	1.82826021211548	6.90920452187173e-07	Up	2.71637273339201e-08	NA	NA	NA	K04706//E3 SUMO-protein ligase PIAS1	gi|723720193|ref|XP_010324635.1|//PREDICTED: uncharacterized protein LOC101255315 isoform X2 [Solanum lycopersicum]
BGI_novel_G000359	723	71.609022738887	12.5601599216312	-2.5112865451669	3.79608242945555e-07	Down	1.4053217120332e-08	NA	NA	NA	K07198//5'-AMP-activated protein kinase, catalytic alpha subunit [EC:2.7.11.11];K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6];K16570//gamma-tubulin complex component 3;K01209//alpha-N-arabinofuranosidase [EC:3.2.1.55];K00654//serine palmitoyltransferase [EC:2.3.1.50]	gi|56407681|gb|AAV88069.1|//hypothetical retrotransposon [Ipomoea batatas]
Solyc02g077280.3.1	2489	353.948844995057	945.219261023825	1.41710816021286	1.0752609502461e-07	Up	3.53190408716369e-09	GO:0016020//membrane;GO:0044424//intracellular part	GO:0032561//guanyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity;GO:0019843//rRNA binding	GO:0042254//ribosome biogenesis;GO:0009207//purine ribonucleoside triphosphate catabolic process	K03595//GTPase	gi|460374302|ref|XP_004232950.1|//PREDICTED: GTPase Era, mitochondrial [Solanum lycopersicum];gi|970010810|ref|XP_015066309.1|//PREDICTED: GTPase Era [Solanum pennellii]
Solyc04g016175.1.1	1096	124.726154665617	60.4592381330659	-1.04472932099708	0.0104186201116592	Down	0.00185794805602952	NA	GO:0000166//nucleotide binding;GO:0003676//nucleic acid binding	NA	K11251//histone H2A;K13195//cold-inducible RNA-binding protein	gi|460381729|ref|XP_004236595.1|//PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial-like [Solanum lycopersicum]
Solyc00g170200.1.1	384	3322.45793909707	1315.24783431967	-1.33691626117167	0.00126804858758699	Down	0.000149036259880428	NA	NA	NA	NA	gi|723754733|ref|XP_004253481.2|//PREDICTED: probable strigolactone esterase D14 homolog [Solanum lycopersicum]
Solyc07g063430.3.1	1891	2256.50976358196	5393.9383666202	1.25724601594437	1.4172997495202e-06	Up	6.10004105888301e-08	GO:0044464//cell part	NA	NA	K13348//protein Mpv17	gi|460397292|ref|XP_004244201.1|//PREDICTED: uncharacterized protein LOC101247444 [Solanum lycopersicum]
Solyc02g087440.3.1	780	23.1536171370195	5.56524903541651	-2.05671944156057	0.0228418180025824	Down	0.00482359384682074	NA	NA	NA	NA	gi|460375806|ref|XP_004233695.1|//PREDICTED: uncharacterized protein LOC101249328 [Solanum lycopersicum]
Solyc05g055990.3.1	945	300.228354776663	726.703153225525	1.27530592897843	3.09523725440366e-10	Up	6.17184253135418e-12	GO:0031224//intrinsic component of membrane	NA	GO:0006810//transport	K09872//aquaporin PIP	gi|460388039|ref|XP_004239679.1|//PREDICTED: aquaporin PIP2-4 [Solanum lycopersicum]
Solyc01g080850.3.1	3316	2297.99478059745	950.758159891648	-1.27322520024861	6.28717930313038e-09	Down	1.61456120087872e-10	GO:0005829//cytosol;GO:0030127//COPII vesicle coat;GO:0012507//ER to Golgi transport vesicle membrane	GO:0046914//transition metal ion binding;GO:0008270//zinc ion binding	GO:0006886//intracellular protein transport;GO:0048193//Golgi vesicle transport;GO:0006888//ER to Golgi vesicle-mediated transport;GO:0015031//protein transport	K14006//protein transport protein SEC23	gi|460367284|ref|XP_004229505.1|//PREDICTED: protein transport protein SEC23 [Solanum lycopersicum];gi|225437779|ref|XP_002281404.1|//PREDICTED: protein transport protein SEC23 [Vitis vinifera]
Solyc01g079800.3.1	1905	78.9681395063228	171.360420116991	1.11769131629629	2.45520326822264e-05	Up	1.54603019205491e-06	NA	GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0004386//helicase activity;GO:0042623//ATPase activity, coupled;GO:0003676//nucleic acid binding	NA	K11594//ATP-dependent RNA helicase DDX3X [EC:3.6.4.13];K12823//ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13];K12614//ATP-dependent RNA helicase DDX6/DHH1 [EC:3.6.4.13];K14778//ATP-dependent RNA helicase DDX49/DBP8 [EC:3.6.4.13]	gi|460367114|ref|XP_004229420.1|//PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic isoform X2 [Solanum lycopersicum];gi|723658741|ref|XP_010322546.1|//PREDICTED: DEAD-box ATP-dependent RNA helicase 58, chloroplastic isoform X1 [Solanum lycopersicum]
Solyc11g013810.2.1	3289	2753.06872685423	984.678317454292	-1.48331622986883	1.0752609502461e-07	Down	3.53870288084858e-09	NA	GO:0008940//nitrate reductase activity;GO:0005506//iron ion binding;GO:0050662//coenzyme binding	GO:0042126//nitrate metabolic process	K10534//nitrate reductase (NAD(P)H) [EC:1.7.1.1 1.7.1.2 1.7.1.3]	gi|460409861|ref|XP_004250355.1|//PREDICTED: nitrate reductase [NADH]-like [Solanum lycopersicum]
Solyc05g023680.3.1	2269	1047.34375759954	503.277042727071	-1.05731034411927	0.000836574780622259	Down	9.06761453338122e-05	NA	GO:0046872//metal ion binding	NA	K10638//E3 ubiquitin-protein ligase UHRF1 [EC:2.3.2.27]	gi|460387820|ref|XP_004239571.1|//PREDICTED: E3 ubiquitin-protein ligase ORTHRUS 2-like [Solanum lycopersicum]
Solyc04g073990.3.1	1416	1412.83270655848	5263.14124991112	1.89733346743034	2.95864768556122e-16	Up	2.07038551359814e-18	NA	GO:0046872//metal ion binding;GO:0005543//phospholipid binding	NA	K17095//annexin A7/11	gi|350538805|ref|NP_001234104.1|//annexin p34 [Solanum lycopersicum]
Solyc07g065960.1.1	486	761.442583642779	335.997611770535	-1.18028427627006	8.57633966485136e-10	Down	1.84884974716322e-11	NA	GO:0005515//protein binding	NA	K03686//molecular chaperone DnaJ;K01956//carbamoyl-phosphate synthase small subunit [EC:6.3.5.5]	gi|460396914|ref|XP_004244015.1|//PREDICTED: chaperone protein dnaJ 11, chloroplastic-like [Solanum lycopersicum]
Solyc08g076970.3.1	2127	12673.2168210385	4632.11067091422	-1.4520411399016	2.71583829440023e-05	Down	1.73392685688382e-06	NA	NA	NA	K01438//acetylornithine deacetylase [EC:3.5.1.16]	gi|460400744|ref|XP_004245892.1|//PREDICTED: acetylornithine deacetylase [Solanum lycopersicum];gi|970044216|ref|XP_015083516.1|//PREDICTED: acetylornithine deacetylase-like [Solanum pennellii]
Solyc02g090400.3.1	1433	380.330098262422	892.777952892056	1.23104928597833	8.24200164739616e-05	Up	6.14619945829013e-06	NA	NA	NA	K14491//two-component response regulator ARR-B family	gi|460375694|ref|XP_004233639.1|//PREDICTED: putative two-component response regulator ARR13 [Solanum lycopersicum]
Solyc12g049560.2.1	1635	662.505546596034	308.636576016978	-1.10202348959826	1.89015966600735e-10	Down	3.6124947717522e-12	NA	NA	NA	K09286//EREBP-like factor	gi|460414079|ref|XP_004252402.1|//PREDICTED: ethylene-responsive transcription factor RAP2-12 [Solanum lycopersicum]
Solyc09g010470.3.1	1626	234.938510564277	567.935459650361	1.2734437748751	0.012534410186774	Up	0.00231117924474715	NA	NA	NA	NA	gi|460401916|ref|XP_004246461.1|//PREDICTED: UNC93-like protein 3 [Solanum lycopersicum]
Solyc12g096320.2.1	1238	214.634091047723	72.0153192540828	-1.57550350483876	0.00220360669958338	Down	0.000287264755984063	NA	NA	NA	K07232//cation transport protein ChaC	gi|460415441|ref|XP_004253067.1|//PREDICTED: cation transport regulator-like protein 2 [Solanum lycopersicum]
Solyc01g105630.3.1	959	1081.77439656594	2210.96474183536	1.03127636143351	6.43316378470433e-06	Up	3.34727822206399e-07	NA	GO:0046872//metal ion binding;GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	GO:0008152//metabolic process	K02183//calmodulin	gi|460369574|ref|XP_004230637.1|//PREDICTED: calmodulin-like [Solanum lycopersicum]
Solyc10g076670.2.1	666	415.577879942444	69.0526428784598	-2.58935032815443	5.31436286456478e-21	Down	2.1793286389675e-23	NA	NA	NA	K05277//leucoanthocyanidin dioxygenase [EC:1.14.11.19]	gi|723740029|ref|XP_010312367.1|//PREDICTED: leucoanthocyanidin dioxygenase-like, partial [Solanum lycopersicum]
Solyc11g071560.2.1	991	72.4380816065638	173.022798762008	1.25614190584198	0.0247185084645774	Up	0.00529316543451817	NA	NA	NA	K13993//HSP20 family protein	gi|460412076|ref|XP_004251429.1|//PREDICTED: inactive protein RESTRICTED TEV MOVEMENT 2-like [Solanum lycopersicum]
Solyc01g107890.3.1	2928	91.8346861523043	35.8619004244415	-1.35658722273526	0.0389275266941731	Down	0.00936281708637505	NA	NA	NA	K10352//myosin heavy chain;K20283//golgin subfamily A member 4	gi|460369839|ref|XP_004230764.1|//PREDICTED: filament-like plant protein 7 [Solanum lycopersicum]
Solyc05g055430.3.1	1261	25.7822471301679	169.184090722447	2.71414399380141	0.000310742239380473	Up	2.85957681536733e-05	NA	NA	NA	K11252//histone H2B	gi|460388111|ref|XP_004239713.1|//PREDICTED: uncharacterized protein LOC101266725 [Solanum lycopersicum]
Solyc12g057000.1.1	1374	858.341262868405	351.066310335117	-1.28980779810921	2.40723508331711e-10	Down	4.71847057339434e-12	NA	NA	NA	NA	gi|460414353|ref|XP_004252536.1|//PREDICTED: uncharacterized protein LOC101249533 [Solanum lycopersicum]
Solyc01g100380.3.1	1742	22129.9544040627	5658.02318228868	-1.96763048572436	5.47643777559062e-22	Down	1.85432430324739e-24	GO:0044432//endoplasmic reticulum part	GO:0030246//carbohydrate binding;GO:0046872//metal ion binding;GO:0005515//protein binding	GO:0044267//cellular protein metabolic process	K08057//calreticulin	gi|460368893|ref|XP_004230299.1|//PREDICTED: calreticulin [Solanum lycopersicum]
Solyc01g044240.3.1	592	46.5052045943702	231.571494443546	2.31599358559012	0.000107833226967998	Up	8.33293635034869e-06	NA	NA	NA	NA	NA
Solyc08g079880.2.1	2265	429.342367966534	105.154990023448	-2.02961123318385	1.52742761611472e-05	Down	8.95883993048475e-07	NA	GO:0004175//endopeptidase activity;GO:0005515//protein binding	GO:0044092//negative regulation of molecular function;GO:0019538//protein metabolic process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K11262//acetyl-CoA carboxylase / biotin carboxylase 1 [EC:6.4.1.2 6.3.4.14];K13199//plasminogen activator inhibitor 1 RNA-binding protein;K01183//chitinase [EC:3.2.1.14]	gi|460400310|ref|XP_004245678.1|//PREDICTED: subtilisin-like protease SDD1 [Solanum lycopersicum]
Solyc08g067160.3.1	1524	189.553947470494	749.240443840008	1.98282027703655	7.26280546010831e-06	Up	3.87185678591929e-07	NA	GO:0003824//catalytic activity	NA	K06130//lysophospholipase II [EC:3.1.1.5]	gi|460399339|ref|XP_004245199.1|//PREDICTED: acyl-protein thioesterase 1 homolog 1-like [Solanum lycopersicum]
Solyc03g044430.3.1	2310	144.008446476343	293.647877478527	1.02793377787337	3.17339549627742e-05	Up	2.0738103751068e-06	GO:0044424//intracellular part	GO:0016763//transferase activity, transferring pentosyl groups	GO:0019357//nicotinate nucleotide biosynthetic process;GO:0019359//nicotinamide nucleotide biosynthetic process	K00763//nicotinate phosphoribosyltransferase [EC:6.3.4.21]	gi|460377780|ref|XP_004234666.1|//PREDICTED: nicotinate phosphoribosyltransferase isoform X1 [Solanum lycopersicum];gi|970012687|ref|XP_015067290.1|//PREDICTED: nicotinate phosphoribosyltransferase 1-like [Solanum pennellii]
Solyc09g097850.1.1	405	44.4006931161397	107.085069604524	1.27010324252369	0.00682454265160088	Up	0.00111791041027352	NA	NA	NA	K13899//cystatin-C	gi|723733513|ref|XP_010326957.1|//PREDICTED: cysteine proteinase inhibitor B [Solanum lycopersicum]
Solyc02g069040.3.1	2173	36.2096683092675	94.3107794409743	1.3810477146847	0.0111166480588715	Up	0.00200041112361107	NA	NA	NA	K03283//heat shock 70kDa protein 1/8;K12598//ATP-dependent RNA helicase DOB1 [EC:3.6.4.13];K19022//AP-5 complex subunit beta-1	gi|723676303|ref|XP_010317012.1|//PREDICTED: uncharacterized protein LOC101243762 [Solanum lycopersicum]
Solyc12g036170.2.1	858	921.533911708069	1910.49344645767	1.05183614688006	1.29738376548501e-07	Up	4.358779919406e-09	NA	NA	NA	NA	gi|460413712|ref|XP_004252225.1|//PREDICTED: uncharacterized protein LOC101254767 isoform X1 [Solanum lycopersicum]
Solyc07g056540.3.1	1499	16677.6961405285	34846.4353273527	1.06309107237646	0.000444578326823631	Up	4.33855068199991e-05	NA	GO:0000166//nucleotide binding;GO:0010181//FMN binding;GO:0003824//catalytic activity;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process;GO:0055114//oxidation-reduction process	K11517//(S)-2-hydroxy-acid oxidase [EC:1.1.3.15]	gi|808154224|ref|NP_001294871.1|//peroxisomal (S)-2-hydroxy-acid oxidase GLO1 [Solanum lycopersicum]
Solyc03g058970.3.1	2732	1104.39896860017	2233.83578715611	1.01626168919352	6.46706913101395e-10	Up	1.36251268373507e-11	NA	NA	NA	K06617//raffinose synthase [EC:2.4.1.82]	gi|723681371|ref|XP_010317879.1|//PREDICTED: probable galactinol--sucrose galactosyltransferase 2 [Solanum lycopersicum]
Solyc08g006820.3.1	5070	720.373519306846	318.272215809334	-1.178483929617	0.000148748403820805	Down	1.21158876701295e-05	GO:0031224//intrinsic component of membrane;GO:0016021//integral component of membrane	NA	NA	K17086//transmembrane 9 superfamily member 2/4	gi|460397947|ref|XP_004244526.1|//PREDICTED: transmembrane 9 superfamily member 4-like [Solanum lycopersicum];gi|661888520|emb|CDP07847.1|//unnamed protein product [Coffea canephora]
Solyc05g050990.1.1	1308	137.533775878228	65.8825994975642	-1.06181657768255	0.00154347855402991	Down	0.000187679559316203	NA	NA	NA	K08679//UDP-glucuronate 4-epimerase [EC:5.1.3.6]	gi|460388788|ref|XP_004240046.1|//PREDICTED: UDP-glucuronate 4-epimerase 3-like [Solanum lycopersicum]
Solyc09g055710.3.1	434	1.93085187856858	23.978607587578	3.63443848521895	4.84369729328196e-05	Up	3.3293585232604e-06	NA	NA	NA	NA	NA
Solyc10g076660.2.1	1653	4086.03286640929	1137.05440508621	-1.84539952350326	2.03707721810322e-21	Down	7.43402897501928e-24	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K05933//aminocyclopropanecarboxylate oxidase [EC:1.14.17.4];K05277//leucoanthocyanidin dioxygenase [EC:1.14.11.19]	gi|723737759|ref|XP_010327726.1|//PREDICTED: leucoanthocyanidin dioxygenase isoform X2 [Solanum lycopersicum];gi|460407264|ref|XP_004249074.1|//PREDICTED: leucoanthocyanidin dioxygenase isoform X1 [Solanum lycopersicum]
Solyc01g050010.3.1	1221	44.2418821114709	112.311884060495	1.3440259254926	0.000161058245788998	Up	1.33185110701361e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K00872//homoserine kinase [EC:2.7.1.39];K17479//glutaredoxin domain-containing cysteine-rich protein 1;K05658//ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:3.6.3.44];K17917//sorting nexin-1/2	gi|969997130|ref|XP_015066272.1|//PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER-like [Solanum pennellii]
Solyc01g073680.3.1	921	455.129572935006	171.971652395952	-1.40410655890728	0.00401475729493335	Down	0.000592848848104341	NA	NA	GO:0051234//establishment of localization	NA	gi|460366948|ref|XP_004229337.1|//PREDICTED: protein YLS3 [Solanum lycopersicum]
Solyc02g093480.3.1	2119	592.540312884837	247.416898897915	-1.25996926801898	5.03644077586226e-07	Down	1.9175613488234e-08	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K03252//translation initiation factor 3 subunit C;K19562//bifunctional dethiobiotin synthetase / adenosylmethionine---8-amino-7-oxononanoate aminotransferase [EC:6.3.3.3 2.6.1.62];K19995//secretory carrier-associated membrane protein	gi|460372028|ref|XP_004231836.1|//PREDICTED: uncharacterized protein LOC101259386 isoform X1 [Solanum lycopersicum];gi|723669137|ref|XP_010315956.1|//PREDICTED: uncharacterized protein LOC101259386 isoform X2 [Solanum lycopersicum];gi|565343341|ref|XP_006338796.1|//PREDICTED: uncharacterized protein LOC102581795 isoform X1 [Solanum tuberosum]
Solyc02g061745.1.1	2602	442.933887992723	201.743243419051	-1.1345710221533	4.34452024863429e-08	Down	1.31577832962777e-09	GO:0016021//integral component of membrane	GO:0015238//drug transmembrane transporter activity;GO:0015297//antiporter activity	GO:0006855//drug transmembrane transport	K20456//oxysterol-binding protein 1	gi|460375567|ref|XP_004233576.1|//PREDICTED: MATE efflux family protein 3, chloroplastic-like [Solanum lycopersicum]
Solyc04g080130.3.1	2238	1019.7661026518	483.87625017813	-1.07552825314844	1.3070529559617e-05	Down	7.51383339619818e-07	NA	NA	NA	K14794//ribosomal RNA-processing protein 12;K12309//beta-galactosidase [EC:3.2.1.23]	gi|460385096|ref|XP_004238241.1|//PREDICTED: zinc finger protein NUTCRACKER-like [Solanum lycopersicum]
Solyc05g009890.1.1	1362	188.765072242317	55.4971958245792	-1.76610506169685	0.00235374584955884	Down	0.000310910522114413	NA	GO:0008233//peptidase activity	NA	K00924;K02882//large subunit ribosomal protein L18Ae;K01381//saccharopepsin [EC:3.4.23.25]	gi|460386568|ref|XP_004238970.1|//PREDICTED: aspartic proteinase CDR1 [Solanum lycopersicum]
Solyc03g117675.1.1	1893	4549.90315597861	1646.08699128369	-1.46679525774707	3.73330295269555e-10	Down	7.52840625524761e-12	NA	NA	NA	NA	gi|460380280|ref|XP_004235885.1|//PREDICTED: uncharacterized protein LOC101254582 isoform X1 [Solanum lycopersicum];gi|723686171|ref|XP_010318696.1|//PREDICTED: uncharacterized protein LOC101254582 isoform X2 [Solanum lycopersicum]
Solyc06g075667.1.1	1842	17.270027501777	75.8982630649608	2.13579648958144	8.89922754204266e-05	Up	6.70957561860553e-06	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial;K01601//ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39];K17710//pentatricopeptide repeat domain-containing protein 1	gi|970001921|ref|XP_015060073.1|//PREDICTED: uncharacterized protein LOC107005912 isoform X4 [Solanum pennellii];gi|723730227|ref|XP_010326337.1|//PREDICTED: uncharacterized protein LOC101253719 isoform X3 [Solanum lycopersicum];gi|970001913|ref|XP_015060046.1|//PREDICTED: uncharacterized protein LOC107005912 isoform X1 [Solanum pennellii]
Solyc06g069030.3.1	1339	944.573793582145	2105.55819919122	1.15646733844282	1.53209823866629e-12	Up	1.95979458670631e-14	NA	NA	NA	K12825//splicing factor 3A subunit 1	gi|460392059|ref|XP_004241635.1|//PREDICTED: uncharacterized protein LOC101244674 [Solanum lycopersicum];gi|970037274|ref|XP_015079985.1|//PREDICTED: uncharacterized protein LOC107023719 [Solanum pennellii]
Solyc02g090120.1.1	261	34.2813524132543	8.92740312772511	-1.94111154631788	0.0278303222816084	Down	0.00614088939735265	NA	NA	NA	NA	gi|698485511|ref|XP_009789527.1|//PREDICTED: uncharacterized protein LOC104237137 [Nicotiana sylvestris]
Solyc04g081755.1.1	1712	200.928260667064	783.194689267272	1.9626904880933	2.40464728977683e-10	Up	4.704351356975e-12	NA	NA	NA	K01188//beta-glucosidase [EC:3.2.1.21];K00679//phospholipid:diacylglycerol acyltransferase [EC:2.3.1.158];K10396//kinesin family member 5;K01206//alpha-L-fucosidase [EC:3.2.1.51];K10960//geranylgeranyl reductase [EC:1.3.1.83]	gi|970021019|ref|XP_015071763.1|//PREDICTED: GDSL esterase/lipase EXL3-like [Solanum pennellii];gi|723696123|ref|XP_010320438.1|//PREDICTED: GDSL esterase/lipase EXL3 isoform X1 [Solanum lycopersicum];gi|723696129|ref|XP_004238377.2|//PREDICTED: GDSL esterase/lipase EXL3-like [Solanum lycopersicum];gi|723696665|ref|XP_010320539.1|//PREDICTED: GDSL esterase/lipase EXL3-like [Solanum lycopersicum]
Solyc12g042730.1.1	519	58.3802881109892	307.360329396989	2.39637773447226	2.29017527470229e-18	Up	1.30104012972177e-20	NA	NA	NA	NA	gi|460414247|ref|XP_004252484.1|//PREDICTED: uncharacterized protein DDB_G0288805-like [Solanum lycopersicum]
Solyc01g105080.2.1	2029	34.4455055098981	9.30832088671485	-1.88772289977319	0.00232505345267216	Down	0.000306508175250686	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460371030|ref|XP_004231349.1|//PREDICTED: probable inactive receptor kinase At2g26730 [Solanum lycopersicum]
Solyc07g007860.1.1	417	61.7826312401015	5.60658980770791	-3.46200588717774	0.000147746240688279	Down	1.20175836105365e-05	NA	NA	NA	K02883//large subunit ribosomal protein L18e	gi|970038851|ref|XP_015080759.1|//PREDICTED: 36.4 kDa proline-rich protein-like [Solanum pennellii]
Solyc10g012370.3.1	1421	3889.95789778508	1159.25306326688	-1.746559001597	2.00995986970475e-10	Down	3.87170599431465e-12	NA	GO:0048037//cofactor binding;GO:0016835//carbon-oxygen lyase activity	GO:0000097//sulfur amino acid biosynthetic process;GO:0006563//L-serine metabolic process	K13034//L-3-cyanoalanine synthase/ cysteine synthase [EC:2.5.1.47 4.4.1.9]	gi|723733606|ref|XP_010326974.1|//PREDICTED: bifunctional L-3-cyanoalanine synthase/cysteine synthase 1, mitochondrial [Solanum lycopersicum]
Solyc02g091100.3.1	2387	11799.6653726345	3831.03373593226	-1.62294031145236	3.2886555035999e-07	Down	1.20138619036701e-08	NA	GO:0046872//metal ion binding;GO:0019842//vitamin binding;GO:0003824//catalytic activity	NA	K12261//2-hydroxyacyl-CoA lyase 1 [EC:4.1.-.-]	gi|460372397|ref|XP_004232017.1|//PREDICTED: 2-hydroxyacyl-CoA lyase [Solanum lycopersicum]
Solyc07g063250.3.1	1238	266.910453342969	650.883527418843	1.28604359428662	7.75635546341191e-15	Up	6.50740131053746e-17	GO:0044464//cell part	NA	NA	K08472//mlo protein	gi|460397324|ref|XP_004244217.1|//PREDICTED: MLO-like protein 11 [Solanum lycopersicum]
Solyc02g093750.3.1	2423	241.719108827162	99.9704148311121	-1.27375841513018	4.11201995684787e-07	Down	1.53001795986552e-08	GO:0016020//membrane	GO:0046872//metal ion binding	NA	NA	gi|460371982|ref|XP_004231813.1|//PREDICTED: UPF0392 protein RCOM_0530710-like [Solanum lycopersicum]
Solyc07g063165.1.1	2919	84.4830825697504	40.6174017513956	-1.05656452083859	0.0248629783718941	Down	0.00533553155128984	NA	NA	NA	K10418//dynein light chain LC8-type	gi|460397624|ref|XP_004244367.1|//PREDICTED: dynein light chain, cytoplasmic-like [Solanum lycopersicum];gi|460397346|ref|XP_004244228.1|//PREDICTED: PH domain-containing protein YHR131C-like [Solanum lycopersicum]
Solyc04g064880.3.1	880	1322.77404677456	597.750172556245	-1.14595209828655	0.0168211104553295	Down	0.00330853143192109	NA	NA	NA	NA	gi|460384086|ref|XP_004237745.1|//PREDICTED: pathogen-related protein [Solanum lycopersicum]
Solyc05g055440.1.1	444	3752.47665257212	1767.68802021544	-1.08597942009173	0.0413693101559783	Down	0.0100743676296691	GO:0043231//intracellular membrane-bounded organelle;GO:0000785//chromatin	GO:0003676//nucleic acid binding	GO:0034728//nucleosome organization	K11252//histone H2B	gi|1000940412|ref|XP_002532620.2|//PREDICTED: probable histone H2B.3 [Ricinus communis]
Solyc02g079190.3.1	3140	1059.75303498682	386.705620041664	-1.4544204615238	2.51867016660202e-06	Down	1.15983908349168e-07	NA	GO:0043178//alcohol binding	GO:0009755//hormone-mediated signaling pathway	K14485//transport inhibitor response 1	gi|460373991|ref|XP_004232795.1|//PREDICTED: protein AUXIN SIGNALING F-BOX 2-like [Solanum lycopersicum]
Solyc04g078770.3.1	1083	113.103107883449	36.6277312145097	-1.62663032682702	0.00252085280023734	Down	0.000337915670701492	NA	NA	NA	K09419//heat shock transcription factor, other eukaryote	gi|460384899|ref|XP_004238144.1|//PREDICTED: heat stress transcription factor B-4 [Solanum lycopersicum]
Solyc09g005560.3.1	1865	1320.52856516845	3428.25366621517	1.3763583528297	3.40222042434297e-05	Up	2.24509183137918e-06	NA	NA	NA	NA	gi|460402506|ref|XP_004246753.1|//PREDICTED: trihelix transcription factor GT-3b [Solanum lycopersicum]
Solyc07g064600.3.1	1615	12444.3182239134	3475.59531799393	-1.8401551763957	1.2623721584823e-07	Down	4.22690451862019e-09	NA	NA	NA	K13719//ubiquitin thioesterase OTU1 [EC:3.1.2.-]	gi|525314409|ref|NP_001266269.1|//inducible plastid-lipid associated protein [Solanum lycopersicum]
Solyc02g084980.3.1	2226	77.037903042324	346.976944793126	2.1711994658375	3.15060210321105e-11	Up	5.04949772749401e-13	NA	GO:0016740//transferase activity	NA	K18819//inositol 3-alpha-galactosyltransferase [EC:2.4.1.123]	gi|820375555|ref|NP_001234668.2|//galactinol synthase 2 [Solanum lycopersicum]
Solyc01g098110.3.1	6173	3196.68250055489	1439.97095203363	-1.15053575149056	0.012000290659277	Down	0.00219373259267972	NA	NA	NA	K10955//intestinal mucin-2;K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6];K12828//splicing factor 3B subunit 1	gi|460368575|ref|XP_004230141.1|//PREDICTED: acyltransferase-like protein At1g54570, chloroplastic isoform X1 [Solanum lycopersicum];gi|971551308|ref|XP_015164434.1|//PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like isoform X1 [Solanum tuberosum]
Solyc00g020000.1.1	174	6.92575738765392	19.9797109347339	1.52849195516828	0.0433995565771127	Up	0.0107339610586132	NA	NA	NA	NA	NA
Solyc09g064940.2.1	1176	2614.07008762909	1219.82832304191	-1.09961970357802	0.0124494716995199	Down	0.00229177069321862	NA	NA	NA	NA	gi|723730347|ref|XP_010326359.1|//PREDICTED: phenazine biosynthesis-like domain-containing protein 1 [Solanum lycopersicum]
Solyc03g098060.2.1	525	33.2016090046477	4.77906050973567	-2.79645421925024	0.00317810102742705	Down	0.000447301578013716	NA	NA	NA	NA	gi|460379240|ref|XP_004235372.1|//PREDICTED: zinc-finger homeodomain protein 7-like [Solanum lycopersicum]
Solyc10g084070.1.1	243	4.03770625373166	27.8835907866355	2.78780849780574	8.24200164739616e-05	Up	6.14852110261495e-06	NA	NA	NA	NA	gi|697134363|ref|XP_009621234.1|//PREDICTED: uncharacterized protein LOC104112899 [Nicotiana tomentosiformis]
Solyc01g059880.3.1	2471	2383.58876302374	1066.94976451397	-1.15964310031031	3.79477161999833e-07	Down	1.40340876691436e-08	NA	NA	NA	K01648//ATP citrate (pro-S)-lyase [EC:2.3.3.8]	gi|460366268|ref|XP_004229010.1|//PREDICTED: ATP-citrate synthase beta chain protein 2-like [Solanum lycopersicum]
Solyc07g053360.3.1	1848	44.688867949621	183.231332719405	2.03567882243736	4.33983584312528e-06	Up	2.14085577914905e-07	NA	NA	NA	K20254//perilipin-4	gi|723715400|ref|XP_004243405.2|//PREDICTED: seed biotin-containing protein SBP65-like [Solanum lycopersicum]
Solyc12g049550.2.1	978	118.97867810727	32.7832231718051	-1.85967344565482	0.00202150175845761	Down	0.000259646614122433	NA	NA	NA	K21026;K17604//zinc finger SWIM domain-containing protein 3;K00679//phospholipid:diacylglycerol acyltransferase [EC:2.3.1.158];K01206//alpha-L-fucosidase [EC:3.2.1.51]	gi|460414083|ref|XP_004252404.1|//PREDICTED: GDSL esterase/lipase 5-like [Solanum lycopersicum]
Solyc10g007570.3.1	1229	56.155196888482	7.52148454529739	-2.90033019759117	0.000468574552957515	Down	4.6275703593434e-05	NA	NA	NA	K04125//gibberellin 2-oxidase [EC:1.14.11.13]	gi|970055771|ref|XP_015089533.1|//PREDICTED: gibberellin 2-beta-dioxygenase 1-like [Solanum pennellii]
Solyc02g077630.3.1	3453	220.201190049729	45.6916835360755	-2.26881876022995	1.06847668160458e-06	Down	4.44997624731481e-08	GO:0016020//membrane	GO:0000166//nucleotide binding;GO:0004672//protein kinase activity	GO:0008152//metabolic process	K00924	gi|460374247|ref|XP_004232923.1|//PREDICTED: receptor-like protein kinase HSL1 [Solanum lycopersicum]
Solyc01g011200.3.1	1067	13.2003695091208	41.57773940115	1.65523300585688	0.00138828248198349	Up	0.000166301407924584	NA	NA	NA	K00924	gi|723656430|ref|XP_010317677.1|//PREDICTED: aspartic proteinase-like protein 2 [Solanum lycopersicum]
Solyc07g063480.3.1	1659	127.157573083491	347.131874273263	1.44886645538272	9.62103559590616e-13	Up	1.19810488421555e-14	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460397281|ref|XP_004244196.1|//PREDICTED: receptor-like protein kinase THESEUS 1 [Solanum lycopersicum]
Solyc03g071690.3.1	1091	170.471332780579	422.745226402505	1.31025931434124	9.30561076004576e-06	Up	5.12893896292966e-07	NA	GO:0022892//substrate-specific transporter activity;GO:0020037//heme binding;GO:0046872//metal ion binding;GO:0005506//iron ion binding;GO:0019825//oxygen binding	GO:0015669//gas transport;GO:0006631//fatty acid metabolic process;GO:0009725//response to hormone;GO:0019432//triglyceride biosynthetic process	NA	gi|350538955|ref|NP_001234111.1|//non-symbiotic hemoglobin 2 [Solanum lycopersicum]
Solyc03g119970.3.1	2059	3682.42083750366	1812.69438608944	-1.02251879912907	1.43388885259982e-06	Down	6.18222959021592e-08	GO:0031224//intrinsic component of membrane;GO:0009941//chloroplast envelope	GO:0032559//adenyl ribonucleotide binding	GO:0051234//establishment of localization	K03301//ATP:ADP antiporter, AAA family	gi|460379953|ref|XP_004235723.1|//PREDICTED: plastidic ATP/ADP-transporter-like [Solanum lycopersicum]
Solyc01g010660.3.1	1842	3141.45030064202	6791.76805829412	1.11235643500843	2.94071861081064e-05	Up	1.90516081558161e-06	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460364995|ref|XP_004228391.1|//PREDICTED: protein kinase 2B, chloroplastic-like [Solanum lycopersicum]
Solyc03g114160.1.1	2049	447.291885751865	162.682191938213	-1.45916025234039	0.00453548756651596	Down	0.000684681426979299	NA	NA	NA	K08332//vacuolar protein 8	gi|460380752|ref|XP_004236118.1|//PREDICTED: U-box domain-containing protein 19-like [Solanum lycopersicum]
Solyc10g006350.3.1	4182	247.943187040081	101.352494845903	-1.29062798170293	0.000282729368183192	Down	2.55392480439369e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460405653|ref|XP_004248290.1|//PREDICTED: microtubule-associated protein TORTIFOLIA1 [Solanum lycopersicum]
Solyc02g071160.3.1	1122	27.6309113083772	2.21856771874898	-3.638582649916	5.03649383237903e-05	Down	3.48651190804267e-06	NA	NA	NA	K20298//vacuolar protein sorting-associated protein 52	gi|460374429|ref|XP_004233013.1|//PREDICTED: uncharacterized protein LOC101264173 [Solanum lycopersicum]
Solyc02g077230.3.1	1328	37.330054327741	8.31050655557463	-2.16732928595348	0.00251975588987741	Down	0.000337604085096682	NA	NA	NA	NA	gi|460374308|ref|XP_004232953.1|//PREDICTED: uncharacterized protein LOC101246784 [Solanum lycopersicum]
Solyc10g086580.2.1	1708	7757.4379608013	18239.8206791255	1.23343938689766	3.58453786223184e-06	Up	1.72079394740701e-07	GO:0009532//plastid stroma;GO:0009570//chloroplast stroma	GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding	NA	K03064//26S proteasome regulatory subunit T4	gi|723739979|ref|XP_010312360.1|//PREDICTED: LOW QUALITY PROTEIN: ribulose bisphosphate carboxylase/oxygenase activase, chloroplastic-like [Solanum lycopersicum];gi|377648386|gb|AFB70996.1|//ribulose bisphosphate carboxylase/oxygenase activase 2 (chloroplast) [Nicotiana attenuata]
Solyc03g118355.1.1	3629	172.383176354982	68.1910674333924	-1.33796430874817	0.0114704176632368	Down	0.00207694789260721	GO:0044464//cell part	GO:0004721//phosphoprotein phosphatase activity;GO:0046914//transition metal ion binding;GO:0016772//transferase activity, transferring phosphorus-containing groups	GO:0006464//cellular protein modification process;GO:0006796//phosphate-containing compound metabolic process	K14165//atypical dual specificity phosphatase [EC:3.1.3.16 3.1.3.48]	gi|460380189|ref|XP_004235840.1|//PREDICTED: dual specificity protein phosphatase PHS1 isoform X1 [Solanum lycopersicum]
Solyc06g007165.1.1	2757	120.606420219782	283.843413317092	1.23478855576562	0.000100844769330226	Up	7.72460309843269e-06	GO:0005759//mitochondrial matrix;GO:0005743//mitochondrial inner membrane;GO:0005777//peroxisome	GO:0003824//catalytic activity;GO:0003959//NADPH dehydrogenase activity;GO:0050662//coenzyme binding	GO:0008152//metabolic process;GO:0055114//oxidation-reduction process	K17871//NADH:ubiquinone reductase (non-electrogenic) [EC:1.6.5.9]	gi|460389528|ref|XP_004240404.1|//PREDICTED: internal alternative NAD(P)H-ubiquinone oxidoreductase A1, mitochondrial [Solanum lycopersicum]
Solyc06g066600.3.1	2357	445.704432637446	1184.53184180409	1.41015776659379	3.63618479016649e-19	Up	1.88786117773881e-21	GO:0005768//endosome;GO:0016021//integral component of membrane;GO:0005802//trans-Golgi network	GO:0022891//substrate-specific transmembrane transporter activity	GO:0055085//transmembrane transport	K08150//MFS transporter, SP family, solute carrier family 2 (myo-inositol transporter), member 13;K08145//MFS transporter, SP family, solute carrier family 2 (facilitated glucose transporter), member 8	gi|698582654|ref|XP_009777886.1|//PREDICTED: probable plastidic glucose transporter 3 [Nicotiana sylvestris];gi|460392266|ref|XP_004241738.1|//PREDICTED: probable plastidic glucose transporter 3 [Solanum lycopersicum]
Solyc06g065930.3.1	2474	5.19521982755495	1.06291137332837	-2.28916348734299	0.021481480005303	Down	0.00447409606130013	NA	GO:0008238//exopeptidase activity;GO:0005488//binding	NA	NA	gi|460392360|ref|XP_004241784.1|//PREDICTED: ER membrane protein complex subunit 7 homolog [Solanum lycopersicum]
Solyc01g009245.1.1	540	21.1775396469217	73.2607213169683	1.79050491533345	0.000903523656874461	Up	9.97343269100703e-05	NA	NA	NA	NA	gi|460365148|ref|XP_004228466.1|//PREDICTED: uncharacterized protein LOC101249750 [Solanum lycopersicum]
Solyc01g049770.3.1	488	241.92193434275	528.203289739432	1.12655170676229	2.42527763754751e-06	Up	1.10497036082394e-07	NA	NA	NA	NA	NA
Solyc07g064990.3.1	1486	145.049608025672	27.8818604683312	-2.3791476608727	0.0160910118090292	Down	0.00313102757999619	NA	GO:0008757//S-adenosylmethionine-dependent methyltransferase activity	GO:0006730//one-carbon metabolic process	K18848//indole-3-acetate O-methyltransferase [EC:2.1.1.278]	gi|460397058|ref|XP_004244085.1|//PREDICTED: indole-3-acetate O-methyltransferase 1 [Solanum lycopersicum]
Solyc10g086640.2.1	3384	219.888645011387	67.7339378245008	-1.69882232897423	0.00379948192548452	Down	0.00055577071957426	NA	NA	NA	K16670//homeobox protein Meis2;K15613//homeobox protein Meis1	gi|460408819|ref|XP_004249839.1|//PREDICTED: BEL1-like homeodomain protein 9 isoform X2 [Solanum lycopersicum]
Solyc06g074780.1.1	432	524.669486582655	217.782172249773	-1.26852302981719	0.0365005659167576	Down	0.00863105751113344	GO:0043231//intracellular membrane-bounded organelle;GO:0000785//chromatin	GO:0003676//nucleic acid binding	GO:0034728//nucleosome organization	K11252//histone H2B	gi|970032083|ref|XP_015077339.1|//PREDICTED: histone H2B.1-like [Solanum pennellii]
Solyc04g074280.1.1	1230	64.9513383440297	17.5280979951297	-1.88968979798912	0.000445909346620179	Down	4.35508150423621e-05	NA	NA	NA	NA	gi|460384441|ref|XP_004237920.1|//PREDICTED: protein ROOT PRIMORDIUM DEFECTIVE 1 [Solanum lycopersicum]
Solyc11g066940.2.1	1875	24.1573834860335	65.1400400513777	1.43108040360873	0.00485665480418595	Up	0.000742384818262134	NA	NA	NA	NA	gi|723745319|ref|XP_010313332.1|//PREDICTED: uncharacterized protein LOC104644768 [Solanum lycopersicum]
Solyc08g078030.3.1	1396	28.6327117523592	5.89983241791663	-2.27891843078063	0.00409333604934062	Down	0.000605838375399022	NA	NA	NA	K13065//shikimate O-hydroxycinnamoyltransferase [EC:2.3.1.133]	gi|723725234|ref|XP_010325516.1|//PREDICTED: spermidine hydroxycinnamoyl transferase-like [Solanum lycopersicum]
Solyc02g082650.3.1	2730	342.251699593339	746.792429748277	1.12564959720206	3.88996866963682e-06	Up	1.89668901273488e-07	GO:0016021//integral component of membrane	GO:0052866//phosphatidylinositol phosphate phosphatase activity	GO:0016311//dephosphorylation	K08739//DNA mismatch repair protein MLH3	gi|565347642|ref|XP_006340833.1|//PREDICTED: phosphoinositide phosphatase SAC6 [Solanum tuberosum]
Solyc05g007640.3.1	4059	234.442648447653	76.537145302989	-1.61500304314533	4.81132691773245e-05	Down	3.30167806544168e-06	NA	NA	NA	K13453;K13457//disease resistance protein RPM1	gi|723697462|ref|XP_004239390.2|//PREDICTED: putative late blight resistance protein homolog R1C-3 [Solanum lycopersicum]
Solyc06g053715.1.1	515	89.0240242925745	14.9573499527451	-2.57334012825109	2.22790305359465e-05	Down	1.38468617176011e-06	NA	NA	NA	NA	NA
Solyc00g059500.2.1	1352	38.9274573538064	15.8899265544462	-1.29267565809989	0.0445656455834502	Down	0.0111270922813849	GO:0044464//cell part	GO:0016772//transferase activity, transferring phosphorus-containing groups	GO:0006644//phospholipid metabolic process	K00993//ethanolaminephosphotransferase [EC:2.7.8.1]	gi|723698224|ref|XP_010320804.1|//PREDICTED: choline/ethanolaminephosphotransferase 1-like [Solanum lycopersicum]
Solyc02g086850.2.1	2888	275.315725878942	20.0648443322742	-3.77834514970336	1.76932458407834e-10	Down	3.36158357772597e-12	GO:0044464//cell part	GO:0046914//transition metal ion binding;GO:0004518//nuclease activity	NA	K18327//RNA exonuclease 4 [EC:3.1.-.-]	gi|460375820|ref|XP_004233702.1|//PREDICTED: RNA exonuclease 4 [Solanum lycopersicum]
Solyc11g010380.2.1	1856	13287.6491781761	4706.58605526692	-1.49733301019865	9.27346238642312e-05	Down	7.03708564086359e-06	GO:0044464//cell part	GO:0015291//secondary active transmembrane transporter activity	GO:0015893//drug transport	K03327//multidrug resistance protein, MATE family	gi|460409403|ref|XP_004250128.1|//PREDICTED: protein TRANSPARENT TESTA 12-like [Solanum lycopersicum]
Solyc09g092430.3.1	1843	1549.46003591001	3248.66169850343	1.06807997047847	9.75707175005463e-12	Up	1.43529535525634e-13	NA	GO:0005488//binding	NA	K17285//selenium-binding protein 1	gi|460404846|ref|XP_004247891.1|//PREDICTED: selenium-binding protein 2 [Solanum lycopersicum]
Solyc12g006590.2.1	3421	151.724810927495	336.231427728001	1.14799755754125	7.01484928870866e-05	Up	5.09619035985569e-06	NA	GO:0008270//zinc ion binding	NA	K15407//queuine tRNA-ribosyltransferase subunit QTRTD1 [EC:2.4.2.29];K13811//3'-phosphoadenosine 5'-phosphosulfate synthase [EC:2.7.7.4 2.7.1.25]	gi|723747324|ref|XP_010313695.1|//PREDICTED: zinc finger Ran-binding domain-containing protein 2-like isoform X2 [Solanum lycopersicum];gi|460412358|ref|XP_004251568.1|//PREDICTED: zinc finger Ran-binding domain-containing protein 2-like isoform X1 [Solanum lycopersicum]
Solyc07g045430.3.1	963	4.13937353318937	23.0107317137118	2.47482251326202	0.00136803250387613	Up	0.000163515397472328	NA	NA	NA	NA	gi|460396013|ref|XP_004243574.1|//PREDICTED: nudix hydrolase 2-like [Solanum lycopersicum]
Solyc09g075680.1.1	993	303.756172251622	99.1024254285697	-1.61592145281508	1.9530444201572e-10	Down	3.7473764269382e-12	NA	NA	NA	K13258//2-hydroxyisoflavanone dehydratase [EC:4.2.1.105]	gi|460403806|ref|XP_004247377.1|//PREDICTED: 2-hydroxyisoflavanone dehydratase-like [Solanum lycopersicum]
Solyc05g052670.1.1	1386	7104.65778440673	1211.45286902535	-2.5520268811802	6.85405909301281e-14	Down	6.67871070387629e-16	NA	NA	NA	K19747//BAHD acyltransferase [EC:2.3.1.-]	gi|460388562|ref|XP_004239936.1|//PREDICTED: BAHD acyltransferase DCR-like [Solanum lycopersicum]
Solyc07g062670.1.1	267	32.4756178816931	9.6552527691149	-1.74997104094435	0.0279457528565036	Down	0.00617056521876674	NA	NA	NA	NA	NA
Solyc04g014870.3.1	4704	739.35572026847	313.366460818896	-1.23841786524973	2.96153160765505e-06	Down	1.39163016477094e-07	NA	GO:0034062//RNA polymerase activity	NA	K11699//RNA-dependent RNA polymerase [EC:2.7.7.48]	gi|167995454|gb|ACA13601.1|//RNA-dependent RNA polymerase [Nicotiana attenuata];gi|723688500|ref|XP_010319120.1|//PREDICTED: RNA-dependent RNA polymerase 6 isoform X1 [Solanum lycopersicum]
Solyc07g007770.2.1	1027	16.9581055359603	79.5617360606899	2.23009974741056	0.000414331130569733	Up	4.01081263715546e-05	NA	NA	NA	NA	gi|971572300|ref|XP_015169921.1|//PREDICTED: uncharacterized protein LOC107063036 [Solanum tuberosum]
Solyc11g062290.2.1	2346	151.734733520882	469.239884586852	1.62877427520783	0.00057540862152111	Up	5.8861401125504e-05	NA	NA	NA	K03108//signal recognition particle subunit SRP72	gi|460410951|ref|XP_004250878.1|//PREDICTED: signal recognition particle subunit SRP72 [Solanum lycopersicum]
Solyc04g078370.3.1	1829	75.8145661120984	201.718266021158	1.41179476652841	0.0025989488631764	Up	0.000350633206296108	NA	NA	NA	K00517;K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30];K07408//cytochrome P450, family 1, subfamily A, polypeptide 1 [EC:1.14.14.1]	gi|460384849|ref|XP_004238119.1|//PREDICTED: cytochrome P450 81E8 [Solanum lycopersicum]
Solyc10g006670.1.1	588	38.0462510678863	168.740940623612	2.14898384053057	8.16488261413444e-12	Up	1.18572034953194e-13	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|747099786|ref|XP_011097953.1|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase At4g27290 [Sesamum indicum]
Solyc10g086460.2.1	1504	5.01988942842545	28.2098144311503	2.49046968383217	0.000486731237607009	Up	4.83251969919073e-05	NA	GO:0005524//ATP binding	NA	K10355//actin, other eukaryote	gi|460408328|ref|XP_004249597.1|//PREDICTED: actin-75 [Solanum lycopersicum];gi|902081773|gb|KNA03135.1|//hypothetical protein SOVF_212020 [Spinacia oleracea]
Solyc08g081155.1.1	1103	104.803843064812	14.7674074884513	-2.82720314097585	2.11835300993985e-08	Down	6.02070597408595e-10	NA	GO:0032559//adenyl ribonucleotide binding;GO:0016884//carbon-nitrogen ligase activity, with glutamine as amido-N-donor	GO:0009064//glutamine family amino acid metabolic process;GO:0006528//asparagine metabolic process;GO:0009168//purine ribonucleoside monophosphate biosynthetic process	K01951//GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]	gi|460400151|ref|XP_004245599.1|//PREDICTED: GMP synthase [glutamine-hydrolyzing] [Solanum lycopersicum]
Solyc06g024310.1.1	790	7.40918060864971	21.4291261790495	1.53218711520902	0.0422058570943647	Up	0.0103466277211016	NA	NA	NA	NA	gi|565369230|ref|XP_006351239.1|//PREDICTED: glycosyltransferase-like At2g41451 [Solanum tuberosum];gi|971537470|ref|XP_015169315.1|//PREDICTED: glycosyltransferase-like KOBITO 1 isoform X2 [Solanum tuberosum]
Solyc08g079890.2.1	2241	778.737474577467	294.949344313007	-1.40066985164145	0.00199293651660295	Down	0.000255602730816383	NA	GO:0004175//endopeptidase activity;GO:0005515//protein binding	GO:0044092//negative regulation of molecular function;GO:0019538//protein metabolic process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K08653//membrane-bound transcription factor site-1 protease [EC:3.4.21.112];K13199//plasminogen activator inhibitor 1 RNA-binding protein	gi|723724635|ref|XP_004245677.2|//PREDICTED: subtilisin-like protease [Solanum lycopersicum]
Solyc08g080590.3.1	519	12.4219205973722	39.4736912665564	1.66800318391673	0.0211720472206323	Up	0.00438654868487668	NA	NA	GO:0006952//defense response	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K14297//nuclear pore complex protein Nup98-Nup96	gi|460400217|ref|XP_004245632.1|//PREDICTED: thaumatin-like protein [Solanum lycopersicum]
Solyc01g099500.1.1	2484	64.1892378194203	186.348490038666	1.53759979341615	1.2713052491301e-06	Up	5.39515545906229e-08	NA	NA	NA	K10900//werner syndrome ATP-dependent helicase [EC:3.6.4.12]	gi|723671240|ref|XP_010316234.1|//PREDICTED: ATP-dependent DNA helicase Q-like SIM [Solanum lycopersicum];gi|970004401|ref|XP_015062996.1|//PREDICTED: ATP-dependent DNA helicase Q-like SIM isoform X1 [Solanum pennellii];gi|731415670|ref|XP_010659632.1|//PREDICTED: ATP-dependent DNA helicase Q-like SIM isoform X3 [Vitis vinifera];gi|723662777|ref|XP_010312973.1|//PREDICTED: ATP-dependent DNA helicase Q-like SIM isoform X9 [Solanum lycopersicum]
Solyc08g006720.3.1	1057	1301.77149468128	2787.70538588864	1.09860187186533	2.85918677138427e-10	Up	5.66889175515242e-12	NA	GO:0004601//peroxidase activity	GO:0008152//metabolic process;GO:0006950//response to stress	K00432//glutathione peroxidase [EC:1.11.1.9]	gi|460397927|ref|XP_004244516.1|//PREDICTED: probable phospholipid hydroperoxide glutathione peroxidase [Solanum lycopersicum]
Solyc02g085880.2.1	1544	50.4684362834155	18.2205214244063	-1.46981714084472	0.00675370135966445	Down	0.00110452745712797	NA	GO:0016634//oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor;GO:0005506//iron ion binding	GO:0008152//metabolic process	K10717//cytokinin trans-hydroxylase	gi|525313944|ref|NP_001266171.1|//cytokinin hydroxylase-like [Solanum lycopersicum]
Solyc02g088427.1.1	1077	51.3063041800166	104.144472039254	1.02137825286264	0.00424269348871908	Up	0.000631934669745629	NA	NA	NA	K08739//DNA mismatch repair protein MLH3	gi|971539165|ref|XP_015160674.1|//PREDICTED: DNA mismatch repair protein MLH3 isoform X9 [Solanum tuberosum];gi|971539159|ref|XP_015160667.1|//PREDICTED: DNA mismatch repair protein MLH3 isoform X7 [Solanum tuberosum];gi|970007339|ref|XP_015064552.1|//PREDICTED: uncharacterized protein LOC107009712 isoform X1 [Solanum pennellii]
Solyc10g074680.2.1	3838	41.9232418142479	6.54924529418247	-2.67834970941062	0.00333553568805096	Down	0.000474604814605294	GO:0005634//nucleus	GO:0043565//sequence-specific DNA binding;GO:0003700//transcription factor activity, sequence-specific DNA binding	GO:0009630//gravitropism;GO:0008356//asymmetric cell division;GO:0006355//regulation of transcription, DNA-templated;GO:0090610//bundle sheath cell fate specification;GO:0009956//radial pattern formation;GO:0048366//leaf development;GO:0051457//maintenance of protein location in nucleus	K14494//DELLA protein	gi|460407136|ref|XP_004249012.1|//PREDICTED: protein SCARECROW [Solanum lycopersicum]
Solyc09g011550.2.1	868	2059.03944571186	588.021185684401	-1.80803142878037	7.13456161682646e-06	Down	3.79006809742624e-07	NA	NA	NA	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|460401756|ref|XP_004246383.1|//PREDICTED: probable glutathione S-transferase [Solanum lycopersicum]
Solyc01g058200.3.1	393	21.6120805247238	118.239342037864	2.45180027895048	0.00185402064597218	Up	0.000233810278604166	NA	NA	NA	NA	gi|460366306|ref|XP_004229029.1|//PREDICTED: uncharacterized protein LOC101245198 [Solanum lycopersicum]
Solyc12g099340.2.1	2899	3040.14629428064	1267.61825101128	-1.26202041225536	3.10409099084094e-05	Down	2.02268081118755e-06	GO:0005634//nucleus	GO:0003677//DNA binding	NA	K14674//TAG lipase / steryl ester hydrolase / phospholipase A2 / LPA acyltransferase [EC:3.1.1.3 3.1.1.13 3.1.1.4 2.3.1.51];K10357//myosin V;K16743//abnormal spindle-like microcephaly-associated protein	gi|525313797|ref|NP_001266140.1|//calmodulin-binding transcription factor SR3L [Solanum lycopersicum];gi|723752622|ref|XP_010314664.1|//PREDICTED: calmodulin-binding transcription factor SR3L isoform X1 [Solanum lycopersicum]
Solyc04g076520.2.1	2230	1066.03849747734	408.493465526682	-1.38387463301175	1.20200976986756e-05	Down	6.81952871693107e-07	NA	NA	NA	NA	gi|460384626|ref|XP_004238011.1|//PREDICTED: F-box protein At5g39450-like [Solanum lycopersicum]
Solyc09g072770.1.1	612	41.8353254970546	118.335195984267	1.50008566772525	2.49004735417679e-06	Up	1.14010068850006e-07	NA	NA	NA	NA	gi|723731723|ref|XP_010326642.1|//PREDICTED: uncharacterized protein LOC104649359 [Solanum lycopersicum]
Solyc10g008960.1.1	1047	7.59303198137542	23.7728697036622	1.64656807656339	0.011679961519959	Up	0.00212682519776529	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460405310|ref|XP_004248119.1|//PREDICTED: serine/threonine-protein kinase-like protein CCR1 [Solanum lycopersicum]
Solyc09g059240.3.1	1907	91.1028039152018	232.66702594093	1.3526994011136	0.00442937590043667	Up	0.000665072957811992	NA	GO:0005506//iron ion binding;GO:0004497//monooxygenase activity	NA	K17961//cytochrome P450, family 82, subfamily G, polypeptide 1 [EC:1.14.-.-]	gi|460403149|ref|XP_004247061.1|//PREDICTED: cytochrome P450 82C4-like [Solanum lycopersicum]
Solyc00g013130.3.1	789	81.4514165156978	209.233724447312	1.36110371109975	1.67011274825242e-06	Up	7.30752869156345e-08	GO:0043231//intracellular membrane-bounded organelle	GO:0050136//NADH dehydrogenase (quinone) activity	GO:0022904//respiratory electron transport chain	K03879//NADH-ubiquinone oxidoreductase chain 2 [EC:1.6.5.3]	gi|147841236|emb|CAN64512.1|//hypothetical protein VITISV_004351 [Vitis vinifera]
Solyc03g044155.1.1	288	17.343915369598	44.255412310312	1.35142428133405	0.0298119554511173	Up	0.00667235978098935	NA	GO:0004175//endopeptidase activity;GO:0005515//protein binding	GO:0044092//negative regulation of molecular function;GO:0019538//protein metabolic process	K13199//plasminogen activator inhibitor 1 RNA-binding protein;K00121//S-(hydroxymethyl)glutathione dehydrogenase / alcohol dehydrogenase [EC:1.1.1.284 1.1.1.1]	gi|460377760|ref|XP_004234656.1|//PREDICTED: subtilisin-like protease [Solanum lycopersicum]
Solyc01g100290.3.1	3436	464.115933771198	203.789530724154	-1.18740529030408	1.31811552178389e-06	Down	5.62852188572128e-08	NA	NA	NA	NA	gi|460368873|ref|XP_004230289.1|//PREDICTED: uncharacterized protein LOC101268805 [Solanum lycopersicum]
Solyc09g092130.3.1	3522	44.3410821501089	132.696190961829	1.58141107389128	0.000467274586363305	Up	4.61121610244902e-05	NA	NA	NA	K00696//sucrose-phosphate synthase [EC:2.4.1.14]	gi|525313846|ref|NP_001266150.1|//sucrose-phosphate synthase B [Solanum lycopersicum]
Solyc03g095310.3.1	2021	255.922973252302	126.175705560612	-1.02027550450158	0.0261029546071413	Down	0.00567429916177811	NA	GO:0005506//iron ion binding;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K10717//cytokinin trans-hydroxylase;K20661	gi|460378914|ref|XP_004235212.1|//PREDICTED: cytochrome P450 714A1-like [Solanum lycopersicum]
Solyc12g005610.2.1	1315	110.932672026819	272.685341303159	1.29755281524083	0.000389223169940713	Up	3.7252962540601e-05	GO:0016021//integral component of membrane	NA	GO:0045493//xylan catabolic process	K13466//EIX receptor 1/2;K03021//DNA-directed RNA polymerase III subunit RPC2 [EC:2.7.7.6];K13465	gi|971554946|ref|XP_015165307.1|//PREDICTED: receptor-like protein 12 [Solanum tuberosum];gi|723747088|ref|XP_010313664.1|//PREDICTED: receptor-like protein 12 [Solanum lycopersicum]
Solyc04g054150.1.1	567	18.4263097416285	3.25971336613551	-2.49895015393745	0.00400521364229541	Down	0.00059098750583456	GO:0043231//intracellular membrane-bounded organelle	GO:0003677//DNA binding	GO:0006351//transcription, DNA-templated	K08065//nuclear transcription Y subunit beta	gi|723692257|ref|XP_010319776.1|//PREDICTED: nuclear transcription factor Y subunit B-3-like [Solanum lycopersicum]
Solyc03g026050.3.1	1070	22.0486061098939	169.78283444963	2.94493124740947	2.94132604746195e-10	Up	5.84281472182058e-12	GO:0044424//intracellular part	NA	NA	K16223//protein FLOWERING LOCUS T	gi|460377175|ref|XP_004234370.1|//PREDICTED: CEN-like protein 1 [Solanum lycopersicum]
Solyc08g022215.1.1	675	1.24613308534721	7.53244457831783	2.59565999840898	0.00740080838678628	Up	0.00123402493492238	GO:0031224//intrinsic component of membrane;GO:0009534//chloroplast thylakoid	NA	GO:0043623//cellular protein complex assembly	K02956//small subunit ribosomal protein S15	gi|937631732|gb|ALI89446.1|//CcsA, partial (chloroplast) [Emmotum nitens]
Solyc02g031970.1.1	648	57.714499144594	11.863456198104	-2.28240942737229	0.0160169323747312	Down	0.00311401288433501	NA	NA	NA	K02935//large subunit ribosomal protein L7/L12	gi|460371530|ref|XP_004231589.1|//PREDICTED: 54S ribosomal protein L12, mitochondrial-like [Solanum lycopersicum]
Solyc10g083630.2.1	6387	2927.09012899281	1443.03590267833	-1.02035997445374	9.65791944079891e-06	Down	5.35945491917923e-07	NA	NA	NA	K10773//endonuclease III [EC:4.2.99.18]	gi|723739171|ref|XP_004249459.2|//PREDICTED: LOW QUALITY PROTEIN: protein ROS1-like [Solanum lycopersicum]
Solyc01g009160.2.1	1150	1454.64506539121	553.643240473328	-1.39363864787015	2.33294973811292e-13	Down	2.54535524474321e-15	GO:0016021//integral component of membrane	NA	NA	K20131//Rab5 GDP/GTP exchange factor	gi|460365156|ref|XP_004228470.1|//PREDICTED: protein YLS9 [Solanum lycopersicum]
Solyc03g071620.1.1	426	551.445842156583	168.850277276121	-1.70747465632801	0.0103774300752065	Down	0.00184747927448748	GO:0043231//intracellular membrane-bounded organelle;GO:0000785//chromatin	GO:0003676//nucleic acid binding	GO:0034728//nucleosome organization	K11252//histone H2B	gi|698506169|ref|XP_009798491.1|//PREDICTED: histone H2B-like [Nicotiana sylvestris]
Solyc06g084020.3.1	1099	3358.78934923113	1523.31460124989	-1.14072739398494	0.0115195048178747	Down	0.00208893954936629	GO:0005634//nucleus;GO:0000786//nucleosome	GO:0003677//DNA binding	GO:0006334//nucleosome assembly	K11275//histone H1/5	gi|970036582|ref|XP_015079632.1|//PREDICTED: histone H1-like [Solanum pennellii];gi|350536329|ref|NP_001233985.1|//histone H1 [Solanum lycopersicum]
Solyc10g006740.3.1	1053	150.637489305051	58.920334389041	-1.35424333647692	0.0259632667558356	Down	0.00563904962307896	NA	NA	NA	K16465//centrin-1;K10840//centrin-2	gi|460405639|ref|XP_004248283.1|//PREDICTED: calcium-binding protein PBP1-like [Solanum lycopersicum]
BGI_novel_G000361	1639	2.56948785975088	20.6754404015011	3.00836531928445	0.000105852038390228	Up	8.15196097008261e-06	NA	NA	NA	K17604//zinc finger SWIM domain-containing protein 3;K17086//transmembrane 9 superfamily member 2/4;K14808//ATP-dependent RNA helicase DDX54/DBP10 [EC:3.6.4.13]	gi|970051250|ref|XP_015087207.1|//PREDICTED: uncharacterized protein LOC107030443 [Solanum pennellii]
Solyc06g005650.2.1	860	3716.1315427248	1627.95090505008	-1.19074437862793	5.16743063938659e-09	Down	1.30060613158376e-10	NA	NA	NA	K11982//E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]	gi|460389460|ref|XP_004240370.1|//PREDICTED: E3 ubiquitin-protein ligase RING1 [Solanum lycopersicum]
Solyc10g078230.2.1	1126	159.036539059375	483.680376611091	1.60469574087469	0.0125014763871911	Up	0.00230322535244826	NA	NA	NA	K09754//coumaroylquinate(coumaroylshikimate) 3'-monooxygenase [EC:1.14.13.36]	gi|460407349|ref|XP_004249115.1|//PREDICTED: cytochrome P450 98A2-like [Solanum lycopersicum];gi|971588228|ref|XP_015161343.1|//PREDICTED: cytochrome P450 98A2-like [Solanum tuberosum]
Solyc07g063080.3.1	2851	78.2513592996503	15.9607731660743	-2.29358527346058	0.00942194058261389	Down	0.00164724446528995	NA	GO:0032561//guanyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity	GO:0009207//purine ribonucleoside triphosphate catabolic process	K01528//dynamin GTPase [EC:3.6.5.5];K17065//dynamin 1-like protein [EC:3.6.5.5]	gi|723718697|ref|XP_010324366.1|//PREDICTED: dynamin-related protein 5A [Solanum lycopersicum]
BGI_novel_G000449	402	178.653984563112	549.763655592252	1.62164344360192	1.55704164155387e-10	Up	2.92897223768598e-12	GO:0005739//mitochondrion	NA	NA	NA	gi|57013963|ref|YP_173435.1|//hypothetical protein NitaMp096 [Nicotiana tabacum]
Solyc01g105435.1.1	3360	97.2604547445087	38.2850172608138	-1.3450734292121	0.00119362759295704	Down	0.000138223691915792	NA	NA	NA	K05681//ATP-binding cassette, subfamily G (WHITE), member 2	gi|970004199|ref|XP_015062890.1|//PREDICTED: ABC transporter G family member 11-like [Solanum pennellii]
Solyc11g071750.2.1	351	98.1429547765139	244.658671147758	1.31781380321528	0.00343782601519183	Up	0.000493427624076631	NA	GO:0046872//metal ion binding	NA	K13448//calcium-binding protein CML	gi|350537863|ref|NP_001234570.1|//regulator of gene silencing [Solanum lycopersicum]
Solyc12g098900.2.1	1129	13.0330384105853	60.3092263493643	2.21020526768917	0.000140585407361008	Up	1.13504997816675e-05	NA	NA	NA	NA	gi|460415216|ref|XP_004252956.1|//PREDICTED: late embryogenesis abundant protein D-29 [Solanum lycopersicum]
Solyc04g078660.1.1	1347	1497.95769390941	427.050083767706	-1.81051969713285	4.07472524385433e-21	Down	1.57899435709931e-23	NA	GO:0016740//transferase activity	NA	K19747//BAHD acyltransferase [EC:2.3.1.-]	gi|460384885|ref|XP_004238137.1|//PREDICTED: uncharacterized acetyltransferase At3g50280 [Solanum lycopersicum]
Solyc12g098570.2.1	3361	894.654129328636	2367.09554249892	1.40371598480859	6.18325663480203e-23	Up	1.83776250620527e-25	NA	NA	NA	K00924	gi|460415263|ref|XP_004252979.1|//PREDICTED: probable receptor protein kinase TMK1 [Solanum lycopersicum]
Solyc12g013665.1.1	3980	203.53658157151	791.34691915192	1.95902218453861	1.98437996009842e-15	Up	1.51553473250556e-17	NA	NA	NA	K19355//mannan endo-1,4-beta-mannosidase [EC:3.2.1.78];K10406//kinesin family member C2/C3	gi|970065564|ref|XP_015059741.1|//PREDICTED: receptor-like protein 12 [Solanum pennellii]
Solyc06g071000.3.1	2184	379.579123291555	1149.54017066171	1.59858432991949	1.02991167151607e-13	Up	1.03068662386484e-15	NA	GO:0016620//oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	GO:0055114//oxidation-reduction process	K00294//1-pyrroline-5-carboxylate dehydrogenase [EC:1.2.1.88]	gi|460391926|ref|XP_004241569.1|//PREDICTED: probable aldehyde dehydrogenase [Solanum lycopersicum];gi|747051063|ref|XP_011071616.1|//PREDICTED: probable aldehyde dehydrogenase [Sesamum indicum]
Solyc08g080750.3.1	993	87.7615434044494	199.728933581117	1.18638254004466	5.50041837437868e-06	Up	2.7978049820015e-07	NA	NA	NA	K03239//translation initiation factor eIF-2B subunit alpha	gi|460400195|ref|XP_004245621.1|//PREDICTED: protein LURP-one-related 4-like [Solanum lycopersicum]
Solyc11g067250.2.1	3896	297.783989009299	87.874136210059	-1.76075567854655	4.64986990685515e-09	Down	1.16159278335283e-10	NA	GO:0005524//ATP binding	NA	K10798//poly [ADP-ribose] polymerase [EC:2.4.2.30];K12196//vacuolar protein-sorting-associated protein 4	gi|697177715|ref|XP_009597829.1|//PREDICTED: poly [ADP-ribose] polymerase 3-like isoform X2 [Nicotiana tomentosiformis];gi|460411971|ref|XP_004251377.1|//PREDICTED: poly [ADP-ribose] polymerase 3-like [Solanum lycopersicum];gi|460411292|ref|XP_004251047.1|//PREDICTED: vacuolar protein sorting-associated protein 4 isoform X1 [Solanum lycopersicum]
Solyc08g042000.3.1	3699	28.4545123036389	60.4907715665995	1.08805760994396	0.0131232640541457	Up	0.00244049263429805	NA	NA	GO:0008152//metabolic process	K00696//sucrose-phosphate synthase [EC:2.4.1.14]	gi|525314321|ref|NP_001266250.1|//sucrose-phosphate synthase A2 [Solanum lycopersicum]
Solyc06g065690.3.1	2856	718.324493204415	324.017318083733	-1.14856478456323	0.000712372161527236	Down	7.51926359737549e-05	GO:0008287//protein serine/threonine phosphatase complex	GO:0019888//protein phosphatase regulator activity	GO:0023052//signaling	K11584//serine/threonine-protein phosphatase 2A regulatory subunit B'	gi|970036498|ref|XP_015079587.1|//PREDICTED: serine/threonine protein phosphatase 2A 57 kDa regulatory subunit B' iota isoform [Solanum pennellii]
Solyc03g111510.3.1	1358	62.7118894628079	23.8515916144279	-1.39465344722658	0.0102922219514373	Down	0.00182921205788525	NA	NA	NA	NA	gi|460381155|ref|XP_004236318.1|//PREDICTED: RING-H2 finger protein ATL47-like isoform X1 [Solanum lycopersicum]
Solyc07g051840.3.1	2671	356.1639505024	758.203825720476	1.09004423605251	5.6847712827374e-05	Up	4.02423615303373e-06	NA	NA	NA	K10268//F-box and leucine-rich repeat protein 2/20;K13424//WRKY transcription factor 33	gi|460395836|ref|XP_004243486.1|//PREDICTED: probable WRKY transcription factor 31 [Solanum lycopersicum]
Solyc06g009670.3.1	3679	58.5821583469433	232.181982589209	1.98672277022634	5.75157784989633e-08	Up	1.78303241095357e-09	NA	GO:0005488//binding	NA	K07953//GTP-binding protein SAR1 [EC:3.6.5.-]	gi|460389878|ref|XP_004240574.1|//PREDICTED: uncharacterized protein LOC101267897 [Solanum lycopersicum]
Solyc03g113520.3.1	2667	463.967047483454	1005.8838510626	1.11636947844049	1.09696317213021e-06	Up	4.59750554459389e-08	NA	NA	NA	K20843;K14413//beta-1,3-galactosyltransferase [EC:2.4.1.-]	gi|460380853|ref|XP_004236168.1|//PREDICTED: probable beta-1,3-galactosyltransferase 19 [Solanum lycopersicum]
Solyc12g099930.2.1	1552	682.431051271509	2173.61723467263	1.67134271260857	4.59246541597629e-12	Up	6.37554453910929e-14	NA	GO:0048037//cofactor binding;GO:0003824//catalytic activity	NA	K00830//alanine-glyoxylate transaminase / serine-glyoxylate transaminase / serine-pyruvate transaminase [EC:2.6.1.44 2.6.1.45 2.6.1.51]	gi|525314083|ref|NP_001265946.1|//Hop-interacting protein THI032 [Solanum lycopersicum]
Solyc10g054670.2.1	827	43.0371027707217	173.178240365534	2.0086048035809	9.69017485513658e-05	Up	7.40434354055019e-06	NA	NA	NA	NA	gi|460406455|ref|XP_004248680.1|//PREDICTED: uncharacterized protein LOC101255145 isoform X1 [Solanum lycopersicum]
Solyc04g049185.1.1	756	3.85993776529915	22.5483746258903	2.54637395031068	0.00261980102518627	Up	0.000354136383878641	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K00872//homoserine kinase [EC:2.7.1.39];K01507//inorganic pyrophosphatase [EC:3.6.1.1];K17479//glutaredoxin domain-containing cysteine-rich protein 1;K10398//kinesin family member 11	gi|970039925|ref|XP_015081314.1|//PREDICTED: zinc finger BED domain-containing protein RICESLEEPER 2-like [Solanum pennellii]
BGI_novel_G000128	475	116.795682650026	24.7925130504585	-2.23601052575986	0.00140154293047391	Down	0.000168258972578715	NA	NA	NA	NA	gi|723680235|ref|XP_010317705.1|//PREDICTED: uncharacterized protein LOC104646170 [Solanum lycopersicum]
Solyc04g080640.1.1	804	958.330503789591	219.331052557387	-2.12741320951742	2.10543469919319e-10	Down	4.06353649618551e-12	NA	NA	NA	NA	gi|460385209|ref|XP_004238297.1|//PREDICTED: uncharacterized protein LOC101245645 [Solanum lycopersicum]
Solyc01g006690.3.1	2014	83.4495412046138	26.2019416309429	-1.67123039472922	0.0217999921269398	Down	0.00455765824866082	NA	NA	NA	NA	gi|460365498|ref|XP_004228638.1|//PREDICTED: uncharacterized protein LOC101252211 [Solanum lycopersicum]
Solyc12g056970.1.1	222	12.0932980208682	59.2458527391932	2.29250642517011	4.74517415980979e-07	Up	1.7995242863387e-08	NA	NA	NA	NA	NA
BGI_novel_G000505	2055	3.191521987973	32.0522505260182	3.32810916582861	8.43802073467269e-06	Up	4.59678480955834e-07	NA	NA	NA	NA	NA
Solyc10g078265.1.1	1987	200.910032627484	432.286832246894	1.10543928324829	2.64005495358637e-05	Up	1.67859024513204e-06	NA	NA	NA	K09571//FK506-binding protein 4/5 [EC:5.2.1.8]	gi|723737901|ref|XP_010327743.1|//PREDICTED: 70 kDa peptidyl-prolyl isomerase-like isoform X1 [Solanum lycopersicum]
Solyc01g102585.1.1	2928	588.701419806882	196.12080565521	-1.5857935138169	7.23765121915077e-10	Down	1.53847740361933e-11	NA	NA	NA	K03252//translation initiation factor 3 subunit C	gi|970001124|ref|XP_015056723.1|//PREDICTED: eukaryotic translation initiation factor 3 subunit C-like [Solanum pennellii]
Solyc01g091910.4.1	3312	3202.21121812657	11050.6384397256	1.7869893459122	3.72506650130681e-13	Up	4.31587313434936e-15	GO:0016020//membrane;GO:0044464//cell part	GO:0004620//phospholipase activity;GO:0004630//phospholipase D activity;GO:0046872//metal ion binding;GO:0008081//phosphoric diester hydrolase activity;GO:0005509//calcium ion binding;GO:0070290//N-acylphosphatidylethanolamine-specific phospholipase D activity	GO:0006650//glycerophospholipid metabolic process;GO:0016042//lipid catabolic process;GO:0046470//phosphatidylcholine metabolic process	K01115//phospholipase D1/2 [EC:3.1.4.4]	gi|350538889|ref|NP_001234108.1|//phospholipase PLDb2 [Solanum lycopersicum];gi|565344810|ref|XP_006339497.1|//PREDICTED: phospholipase D gamma 1-like [Solanum tuberosum];gi|723659633|ref|XP_010323957.1|//PREDICTED: phospholipase PLDb2 isoform X1 [Solanum lycopersicum]
Solyc04g016040.1.1	1935	22.3872066604241	71.7274989307833	1.67985179755136	0.000282801526477607	Up	2.55670454524338e-05	NA	NA	NA	NA	gi|971574597|ref|XP_006360885.2|//PREDICTED: putative UPF0481 protein At3g02645 [Solanum tuberosum]
Solyc08g081480.3.1	1738	476.706407175492	229.795370458574	-1.05275128287394	0.00432807843289573	Down	0.000647094947040167	NA	GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds	GO:0044238//primary metabolic process;GO:0045229//external encapsulating structure organization	K01184//polygalacturonase [EC:3.2.1.15]	gi|460400093|ref|XP_004245570.1|//PREDICTED: probable polygalacturonase [Solanum lycopersicum]
Solyc03g062740.3.1	6396	29.6493145931979	8.66726259003774	-1.77435043480611	0.00883014908670764	Down	0.00152218747612093	NA	NA	NA	K12621//U6 snRNA-associated Sm-like protein LSm2	gi|970013142|ref|XP_015067530.1|//PREDICTED: NAC transcription factor 56-like [Solanum pennellii]
Solyc06g062950.1.1	2331	904.863800707227	1.87759270648286	-8.91267270231074	1.15646467533381e-51	Down	5.22105948231969e-55	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13199//plasminogen activator inhibitor 1 RNA-binding protein;K12663//Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase [EC:5.3.3.-];K01183//chitinase [EC:3.2.1.14]	gi|723710097|ref|XP_010322825.1|//PREDICTED: subtilisin-like protease [Solanum lycopersicum]
Solyc06g008030.3.1	2882	982.042249475745	362.767701424919	-1.43673908057086	0.00250356134975207	Down	0.000334894286843248	NA	NA	NA	K16189//phytochrome-interacting factor 4	gi|723704102|ref|XP_010321805.1|//PREDICTED: transcription factor PIF1-like isoform X1 [Solanum lycopersicum]
Solyc07g063930.3.1	2186	1149.71037426823	300.374682300024	-1.9364353523204	1.61900835758341e-19	Down	8.10113286525934e-22	GO:0031224//intrinsic component of membrane	NA	GO:0006810//transport	K08202//MFS transporter, OCT family, solute carrier family 22 (organic cation transporter), member 4/5	gi|460397226|ref|XP_004244169.1|//PREDICTED: organic cation/carnitine transporter 4 [Solanum lycopersicum]
Solyc01g103970.3.1	1700	109.681707956653	563.709685090945	2.36162941266129	3.5998760704893e-36	Up	3.92763002423589e-39	NA	NA	NA	K15707//RING finger protein 170 [EC:2.3.2.27]	gi|460369252|ref|XP_004230477.1|//PREDICTED: E3 ubiquitin-protein ligase RNF170-like isoform X1 [Solanum lycopersicum];gi|460369254|ref|XP_004230478.1|//PREDICTED: E3 ubiquitin-protein ligase RNF170-like isoform X2 [Solanum lycopersicum]
Solyc01g094237.1.1	1915	451.897776807447	201.161003559863	-1.16764580350753	2.37076349208316e-05	Down	1.48507193917173e-06	NA	GO:0047501//(+)-neomenthol dehydrogenase activity	GO:0006952//defense response;GO:0055114//oxidation-reduction process	K15095//(+)-neomenthol dehydrogenase [EC:1.1.1.208]	gi|723660961|ref|XP_010326206.1|//PREDICTED: (+)-neomenthol dehydrogenase [Solanum lycopersicum];gi|723666720|ref|XP_004229931.2|//PREDICTED: uncharacterized protein LOC101261456 [Solanum lycopersicum]
Solyc06g066360.2.1	3247	87.1508950761155	28.4068934643427	-1.6172744123403	0.000202788453888996	Down	1.74102051081523e-05	NA	NA	NA	K13172//serine/arginine repetitive matrix protein 2	gi|723709381|ref|XP_010322702.1|//PREDICTED: uncharacterized protein LOC104648061 [Solanum lycopersicum]
Solyc06g034290.3.1	1892	26.1691142130004	79.6589854693212	1.60597201371309	0.000202289513169347	Up	1.73369266741825e-05	NA	NA	NA	K13783//MFS transporter, OPA family, solute carrier family 37 (glycerol-3-phosphate transporter), member 1/2	gi|460390263|ref|XP_004240757.1|//PREDICTED: putative glycerol-3-phosphate transporter 1 [Solanum lycopersicum]
Solyc04g018170.1.1	2484	128.114071666022	268.729685094144	1.06872675107478	6.41760575550413e-05	Up	4.61401226439744e-06	NA	NA	NA	K02328//DNA polymerase delta subunit 2;K11323//histone arginine demethylase JMJD6 [EC:1.14.11.-];K12614//ATP-dependent RNA helicase DDX6/DHH1 [EC:3.6.4.13]	gi|723749624|ref|XP_010314114.1|//PREDICTED: uncharacterized protein LOC104644940 [Solanum lycopersicum];gi|971549301|ref|XP_015163897.1|//PREDICTED: uncharacterized protein LOC107060452 [Solanum tuberosum];gi|971588524|ref|XP_015161424.1|//PREDICTED: tripartite motif-containing protein 44-like [Solanum tuberosum]
Solyc09g011540.2.1	907	329.005886618847	101.545483611627	-1.6959873220653	0.000697116733956139	Down	7.33834695865041e-05	NA	GO:0016765//transferase activity, transferring alkyl or aryl (other than methyl) groups	GO:0009755//hormone-mediated signaling pathway	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|460401762|ref|XP_004246385.1|//PREDICTED: probable glutathione S-transferase [Solanum lycopersicum]
Solyc10g051050.2.1	2773	217.504642845131	86.2175331333445	-1.33499300734714	0.00177681657397021	Down	0.000221600712667843	NA	NA	NA	K13453;K13457//disease resistance protein RPM1	gi|723737191|ref|XP_010327575.1|//PREDICTED: putative late blight resistance protein homolog R1A-10 [Solanum lycopersicum]
Solyc07g063970.3.1	2035	24.376929119452	5.77623943678143	-2.07731394288216	0.0326925184527887	Down	0.00750771755590001	GO:0044464//cell part	GO:0046914//transition metal ion binding	NA	NA	gi|460397214|ref|XP_004244163.1|//PREDICTED: uncharacterized protein LOC101261138 [Solanum lycopersicum]
Solyc02g090040.2.1	3974	194.488168728515	434.153394258995	1.15852246841642	1.96033258353785e-08	Up	5.53141248176595e-10	NA	NA	NA	K08739//DNA mismatch repair protein MLH3	gi|565347670|ref|XP_006340847.1|//PREDICTED: DNA mismatch repair protein MLH3 isoform X1 [Solanum tuberosum];gi|723670535|ref|XP_010316173.1|//PREDICTED: uncharacterized protein LOC101258808 [Solanum lycopersicum]
Solyc02g005530.2.1	1301	4.51175450698684	34.862187614774	2.94990262668964	8.3374944661457e-05	Up	6.22645843314493e-06	NA	NA	NA	K07466//replication factor A1;K15255//ATP-dependent DNA helicase PIF1 [EC:3.6.4.12]	gi|723667511|ref|XP_010315581.1|//PREDICTED: uncharacterized protein LOC104645518 [Solanum lycopersicum];gi|723667309|ref|XP_010315541.1|//PREDICTED: uncharacterized protein LOC101256635 [Solanum lycopersicum]
Solyc03g059435.1.1	575	1.42602271718474	10.7011498822508	2.90769695856919	0.00209357145696597	Up	0.000271030074620764	NA	NA	NA	K12471//epsin;K12448//UDP-arabinose 4-epimerase [EC:5.1.3.5];K04460//serine/threonine-protein phosphatase 5 [EC:3.1.3.16]	gi|970022858|ref|XP_015072759.1|//PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Solanum pennellii];gi|723700127|ref|XP_010321114.1|//PREDICTED: uncharacterized protein LOC104647420 [Solanum lycopersicum]
Solyc03g025480.3.1	819	183.922420063704	16.8867342738739	-3.44513509699031	5.15694760604573e-21	Down	2.07597213636905e-23	NA	NA	NA	NA	gi|734403254|gb|KHN32435.1|//Autophagy-related protein 3 [Glycine soja]
Solyc09g010160.2.1	978	66.6935728243951	145.055742072279	1.12098776363724	8.04059923737133e-05	Up	5.96238566473246e-06	NA	NA	NA	K12581//CCR4-NOT transcription complex subunit 7/8	gi|723727673|ref|XP_004246880.2|//PREDICTED: NAC domain-containing protein 90-like [Solanum lycopersicum];gi|970051868|ref|XP_015087529.1|//PREDICTED: NAC domain-containing protein 90-like [Solanum pennellii]
Solyc11g042710.2.1	2920	37.3898243084275	114.7329198938	1.617561800697	0.000650939389537948	Up	6.78612885029967e-05	NA	GO:0016491//oxidoreductase activity	GO:0055114//oxidation-reduction process	K15095//(+)-neomenthol dehydrogenase [EC:1.1.1.208]	gi|565346471|ref|XP_006340278.1|//PREDICTED: short-chain dehydrogenase/reductase 2b-like [Solanum tuberosum];gi|971538146|ref|XP_015158237.1|//PREDICTED: short-chain dehydrogenase/reductase 2b-like [Solanum tuberosum]
Solyc08g076450.3.1	1390	1487.99974006678	3163.45951204488	1.0881288570207	7.90116653797745e-06	Up	4.26567869902093e-07	NA	GO:0048037//cofactor binding	GO:0008152//metabolic process	NA	gi|460400867|ref|XP_004245953.1|//PREDICTED: uncharacterized protein At1g32220, chloroplastic [Solanum lycopersicum]
Solyc01g021675.1.1	956	806.406294678706	1758.28491220793	1.1245900580576	1.46456299883577e-17	Up	9.20173140728268e-20	NA	NA	NA	NA	gi|460364866|ref|XP_004228333.1|//PREDICTED: uncharacterized protein LOC101251608 [Solanum lycopersicum]
Solyc02g091390.3.1	3013	385.010042350882	1839.20151215946	2.25611157560034	2.17681311341639e-10	Up	4.21767777806411e-12	GO:0016021//integral component of membrane	NA	NA	NA	gi|697107473|ref|XP_009607571.1|//PREDICTED: uncharacterized protein LOC104101767 [Nicotiana tomentosiformis];gi|460372353|ref|XP_004231995.1|//PREDICTED: uncharacterized protein LOC101258509 [Solanum lycopersicum]
Solyc01g106800.3.1	2492	116.908501244481	414.686467354709	1.82664112566192	7.41708865688522e-14	Up	7.31105051957836e-16	GO:0031224//intrinsic component of membrane	GO:0015171//amino acid transmembrane transporter activity	GO:0015711//organic anion transport;GO:0015801//aromatic amino acid transport	K14209//solute carrier family 36 (proton-coupled amino acid transporter)	gi|27447655|gb|AAO13688.1|AF013279_1//amino acid transporter [Solanum lycopersicum]
Solyc03g118130.3.1	924	832.58569620831	1831.42604213449	1.13729676399548	1.43114628375956e-07	Up	4.85663637302906e-09	NA	NA	NA	K20093//DNA excision repair protein ERCC-6-like [EC:3.6.4.12];K00366//ferredoxin-nitrite reductase [EC:1.7.7.1]	gi|460380221|ref|XP_004235856.1|//PREDICTED: uncharacterized protein LOC101245339 [Solanum lycopersicum]
Solyc05g052910.3.1	2130	196.894463801187	397.274417569059	1.01271334757559	0.00185260682786972	Up	0.00023349258364799	NA	NA	NA	NA	gi|460388526|ref|XP_004239918.1|//PREDICTED: protein DA1-related 2 isoform X2 [Solanum lycopersicum]
BGI_novel_G000258	385	85.040755625303	10.6220749214296	-3.00108880547742	1.38772157419599e-05	Down	8.02978096731919e-07	NA	NA	NA	NA	gi|970035445|ref|XP_015079056.1|//PREDICTED: uncharacterized protein LOC107023007 [Solanum pennellii]
Solyc12g010960.2.1	1508	1206.1233426278	329.462332220488	-1.87219201519263	3.57713643824904e-10	Down	7.17311407669955e-12	NA	GO:0046914//transition metal ion binding;GO:0003824//catalytic activity	GO:0008152//metabolic process	K07119//uncharacterized protein	gi|460412851|ref|XP_004251811.1|//PREDICTED: 2-alkenal reductase (NADP(+)-dependent)-like isoform X3 [Solanum lycopersicum]
Solyc03g121570.3.1	2594	481.984733857616	234.595343521792	-1.0388130743547	4.87467996390429e-05	Down	3.35830066742024e-06	GO:0031224//intrinsic component of membrane	NA	NA	K17086//transmembrane 9 superfamily member 2/4	gi|460379704|ref|XP_004235601.1|//PREDICTED: transmembrane 9 superfamily member 4 [Solanum lycopersicum]
Solyc05g024430.3.1	662	116.968389923957	249.017859688737	1.09013051490015	5.86357329170052e-06	Up	3.02002702646276e-07	NA	NA	NA	NA	gi|460387279|ref|XP_004239308.1|//PREDICTED: uncharacterized protein LOC101257372 [Solanum lycopersicum]
Solyc03g026270.3.1	618	810.939731831277	268.822264511033	-1.59294206832016	4.32438406656589e-11	Down	7.18475014047536e-13	GO:0043231//intracellular membrane-bounded organelle	GO:0001071//nucleic acid binding transcription factor activity;GO:0003676//nucleic acid binding	GO:0006351//transcription, DNA-templated	K09286//EREBP-like factor	gi|45826358|gb|AAS77819.1|//CBF3 [Solanum lycopersicum]
Solyc07g007350.1.1	768	230.788171087681	102.153205913349	-1.17583479995539	0.00748438677487486	Down	0.00125058871020993	NA	NA	NA	NA	gi|460394893|ref|XP_004243024.1|//PREDICTED: uncharacterized protein LOC101257978 [Solanum lycopersicum]
Solyc02g088160.3.1	4311	48.97144878821	191.233445267076	1.96532207873692	3.30310921716321e-09	Up	7.81661285777148e-11	NA	NA	NA	K17710//pentatricopeptide repeat domain-containing protein 1	gi|697149471|ref|XP_009628946.1|//PREDICTED: uncharacterized protein LOC104119209 [Nicotiana tomentosiformis];gi|971534906|ref|XP_015162444.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g01110-like [Solanum tuberosum]
Solyc12g038670.2.1	2206	530.621561208509	235.510550687833	-1.17189160615168	2.2570384364502e-10	Down	4.39010109723384e-12	NA	NA	NA	NA	gi|460413774|ref|XP_004252254.1|//PREDICTED: uncharacterized protein At1g04910-like [Solanum lycopersicum]
Solyc02g090580.3.1	3389	109.445137614499	264.742432446603	1.2743815855083	0.00850711585897354	Up	0.00145625948676936	NA	NA	NA	K20495;K10756//replication factor C subunit 3/5	gi|460372451|ref|XP_004232044.1|//PREDICTED: uncharacterized protein LOC101247483 isoform X1 [Solanum lycopersicum];gi|723670338|ref|XP_010316149.1|//PREDICTED: uncharacterized protein LOC101247483 isoform X2 [Solanum lycopersicum]
Solyc12g055930.2.1	2617	5167.95353506943	2315.13910852549	-1.15849421632269	1.75186844445324e-06	Down	7.71797572782072e-08	NA	GO:0016857//racemase and epimerase activity, acting on carbohydrates and derivatives;GO:0048037//cofactor binding;GO:0003978//UDP-glucose 4-epimerase activity	GO:0006012//galactose metabolic process;GO:0019318//hexose metabolic process	K01784//UDP-glucose 4-epimerase [EC:5.1.3.2]	gi|590679306|ref|XP_007040543.1|//UDP-D-glucose/UDP-D-galactose 4-epimerase 5 isoform 1 [Theobroma cacao];gi|460414513|ref|XP_004252613.1|//PREDICTED: UDP-glucose 4-epimerase GEPI48-like [Solanum lycopersicum]
Solyc04g054710.3.1	1865	7575.69445872647	2857.67928057887	-1.40653413470798	1.66913331891318e-08	Down	4.66578651599884e-10	NA	GO:0016769//transferase activity, transferring nitrogenous groups;GO:0016846//carbon-sulfur lyase activity;GO:0048037//cofactor binding	GO:0008652//cellular amino acid biosynthetic process	K15849//bifunctional aspartate aminotransferase and glutamate/aspartate-prephenate aminotransferase [EC:2.6.1.1 2.6.1.78 2.6.1.79]	gi|350540010|ref|NP_001234609.1|//prephenate aminotransferase [Solanum lycopersicum]
Solyc12g013810.2.1	753	1010.08757907866	2174.18066858744	1.10599144297151	0.00136816775553321	Up	0.000163583037136363	NA	NA	NA	K03671//thioredoxin 1	gi|970068811|ref|XP_015061538.1|//PREDICTED: thioredoxin-1-like [Solanum pennellii]
Solyc08g067320.2.1	645	53.2094540249021	9.7727109296595	-2.44485187687198	0.00993607874541416	Down	0.00175278212543418	NA	NA	NA	K08912//light-harvesting complex II chlorophyll a/b binding protein 1	gi|970047137|ref|XP_015085083.1|//PREDICTED: chlorophyll a-b binding protein 3C, chloroplastic-like [Solanum pennellii]
Solyc11g011380.2.1	1939	10542.7778653872	4893.74196942478	-1.10724510570755	1.69752811190781e-06	Down	7.45302974641237e-08	GO:0044424//intracellular part	GO:0016211//ammonia ligase activity;GO:0032559//adenyl ribonucleotide binding	GO:0006541//glutamine metabolic process;GO:0071941//nitrogen cycle metabolic process	K01915//glutamine synthetase [EC:6.3.1.2]	gi|1000232033|ref|NP_001306784.1|//glutamine synthetase [Solanum lycopersicum]
Solyc04g078930.3.1	1281	145.226113154768	380.954994869478	1.39131968304869	5.8301654559092e-06	Up	2.99843347563125e-07	NA	NA	NA	K01176//alpha-amylase [EC:3.2.1.1]	gi|723695360|ref|XP_010320333.1|//PREDICTED: alpha-amylase isoform X2 [Solanum lycopersicum];gi|698523450|ref|XP_009758535.1|//PREDICTED: alpha-amylase [Nicotiana sylvestris]
Solyc10g085670.2.1	3938	47.9013836206296	10.13828782424	-2.24025330099878	0.00660597760788741	Down	0.00107644599576598	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460408246|ref|XP_004249557.1|//PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770 [Solanum lycopersicum]
Solyc07g006020.3.1	1481	411.387864317716	166.552330125216	-1.30452369793714	0.00108850155492047	Down	0.000124166166836677	NA	NA	NA	K07297//adiponectin receptor	gi|460394065|ref|XP_004242626.1|//PREDICTED: heptahelical transmembrane protein 2-like [Solanum lycopersicum]
Solyc06g051820.3.1	1871	437.881910116403	1001.05932834226	1.1929137236709	5.91517990243113e-12	Up	8.36759835708844e-14	GO:0016459//myosin complex;GO:0015629//actin cytoskeleton	GO:0003774//motor activity;GO:0017111//nucleoside-triphosphatase activity	NA	NA	gi|970034315|ref|XP_015078475.1|//PREDICTED: myosin heavy chain IB-like [Solanum pennellii]
Solyc01g106060.3.1	1175	260.672889706896	729.684368221894	1.48503199906861	3.83574566043616e-15	Up	3.07379166919828e-17	NA	NA	NA	NA	gi|460369550|ref|XP_004230625.1|//PREDICTED: putative glutamine amidotransferase YLR126C [Solanum lycopersicum]
BGI_novel_G000289	1309	178.95332448786	33.2201038520503	-2.42945485698359	0.0123929287545408	Down	0.0022799631907338	NA	NA	NA	K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6];K03549//KUP system potassium uptake protein;K12447//UDP-sugar pyrophosphorylase [EC:2.7.7.64];K05658//ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:3.6.3.44]	gi|147789747|emb|CAN67403.1|//hypothetical protein VITISV_025614 [Vitis vinifera]
Solyc10g009030.3.1	1128	437.517878694888	185.347118989578	-1.2391122820462	5.6482112874676e-07	Down	2.18599279384506e-08	GO:0031224//intrinsic component of membrane	GO:0016491//oxidoreductase activity	GO:0006631//fatty acid metabolic process	K04712//sphingolipid Delta-4 desaturase [EC:1.14.-.-]	gi|350534880|ref|NP_001234676.1|//uncharacterized protein LOC543709 [Solanum lycopersicum]
Solyc04g049350.3.1	1880	16347.6230151534	5870.2043158144	-1.47759825639608	1.90523832863697e-12	Down	2.47293913987868e-14	GO:0005829//cytosol;GO:0009536//plastid;GO:0009507//chloroplast	GO:0010181//FMN binding;GO:0016838//carbon-oxygen lyase activity, acting on phosphates;GO:0004107//chorismate synthase activity	GO:0009423//chorismate biosynthetic process;GO:0008652//cellular amino acid biosynthetic process;GO:0009073//aromatic amino acid family biosynthetic process	K01736//chorismate synthase [EC:4.2.3.5]	gi|970024762|ref|XP_015073688.1|//PREDICTED: chorismate synthase 1, chloroplastic [Solanum pennellii];gi|350534912|ref|NP_001234422.1|//chorismate synthase 1, chloroplastic precursor [Solanum lycopersicum]
Solyc07g056240.3.1	1447	58.4193259236985	128.860343271753	1.14129072636228	0.000934234346178818	Up	0.00010386239627383	NA	NA	NA	K02541//DNA replication licensing factor MCM3 [EC:3.6.4.12];K03189//urease accessory protein	gi|460395280|ref|XP_004243212.1|//PREDICTED: uncharacterized protein LOC101250133 [Solanum lycopersicum]
Solyc04g008760.2.1	1068	167.704064851908	82.8402687663723	-1.01751351837123	0.00169215994941379	Down	0.000209259960636687	NA	GO:0000166//nucleotide binding;GO:0016772//transferase activity, transferring phosphorus-containing groups	GO:0006566//threonine metabolic process	K00872//homoserine kinase [EC:2.7.1.39]	gi|460382297|ref|XP_004236876.1|//PREDICTED: homoserine kinase [Solanum lycopersicum]
Solyc05g007840.3.1	1023	123.447384760194	49.6183696745366	-1.31495003516503	0.000203243987943509	Down	1.74569610411975e-05	NA	NA	NA	K15032//mTERF domain-containing protein, mitochondrial	gi|723697526|ref|XP_004238819.2|//PREDICTED: uncharacterized protein LOC101247425 [Solanum lycopersicum]
Solyc03g112370.1.1	234	39.5398564152918	14.7994490412158	-1.41776416436001	0.0149897298379243	Down	0.00287162168302146	NA	NA	NA	K00276//primary-amine oxidase [EC:1.4.3.21]	gi|460381021|ref|XP_004236251.1|//PREDICTED: uncharacterized protein LOC101264310 [Solanum lycopersicum]
Solyc10g083360.2.1	1899	1476.32156140683	3208.12225894627	1.11972213002905	3.26465668549214e-06	Up	1.54512344256927e-07	NA	NA	NA	K06892//feruloyl-CoA ortho-hydroxylase [EC:1.14.11.-]	gi|460408012|ref|XP_004249442.1|//PREDICTED: uncharacterized protein LOC101258710 [Solanum lycopersicum]
Solyc04g014800.3.1	1325	194.236071560961	467.207576577233	1.26625252181129	0.000353096838192637	Up	3.31576263404373e-05	NA	GO:0043169//cation binding	NA	K10047//inositol-phosphate phosphatase / L-galactose 1-phosphate phosphatase [EC:3.1.3.25 3.1.3.93]	gi|350534740|ref|NP_001233901.1|//inositol monophosphatase 1 [Solanum lycopersicum]
Solyc02g089020.2.1	1447	4914.42977586571	1886.16545864411	-1.38156779154175	8.27710716339883e-13	Down	1.01828970746103e-14	NA	NA	NA	NA	gi|350539876|ref|NP_001233792.1|//TCP transcription factor 5 [Solanum lycopersicum]
Solyc07g054780.1.1	252	96.9350563540137	19.5071114228645	-2.31301834541912	0.00683225302252975	Down	0.00111968751565612	NA	NA	NA	NA	gi|460395474|ref|XP_004243308.1|//PREDICTED: uncharacterized protein LOC544070 [Solanum lycopersicum]
Solyc10g009430.3.1	1951	91.7513456807582	22.9273696467976	-2.00065846700031	0.00034134745691286	Down	3.1851710502176e-05	NA	NA	NA	K15406//wax-ester synthase / diacylglycerol O-acyltransferase [EC:2.3.1.75 2.3.1.20]	gi|460405234|ref|XP_004248081.1|//PREDICTED: O-acyltransferase WSD1-like [Solanum lycopersicum]
Solyc03g116570.3.1	1005	261.72177461952	535.958432490032	1.03408715531094	0.001009517208769	Up	0.000113447249909443	GO:0009570//chloroplast stroma	NA	NA	NA	gi|460380539|ref|XP_004236013.1|//PREDICTED: DCC family protein At1g52590, chloroplastic isoform X2 [Solanum lycopersicum]
Solyc11g069390.1.1	690	26.871261741268	7.83658164421881	-1.77776767881504	0.0103874724527108	Down	0.00185043950577824	NA	NA	NA	NA	gi|460411465|ref|XP_004251131.1|//PREDICTED: classical arabinogalactan protein 9 [Solanum lycopersicum]
Solyc12g015970.2.1	1441	270.436998786308	620.639518363779	1.19846301957003	1.6690793469209e-09	Up	3.77395292512965e-11	NA	NA	NA	NA	gi|460413122|ref|XP_004251944.1|//PREDICTED: GPI-anchored protein LORELEI-like [Solanum lycopersicum]
Solyc03g034453.1.1	1818	100.081018242225	329.594694859529	1.71952464822844	1.64045486846712e-09	Up	3.70305839383098e-11	GO:0005634//nucleus;GO:0005737//cytoplasm	GO:0061630//ubiquitin protein ligase activity;GO:0008270//zinc ion binding;GO:0016874//ligase activity	GO:0043161//proteasome-mediated ubiquitin-dependent protein catabolic process;GO:0007275//multicellular organism development;GO:0042787//protein ubiquitination involved in ubiquitin-dependent protein catabolic process;GO:0006915//apoptotic process	K04506//E3 ubiquitin-protein ligase SIAH1 [EC:2.3.2.27]	gi|460377701|ref|XP_004234629.1|//PREDICTED: putative E3 ubiquitin-protein ligase SINA-like 6 [Solanum lycopersicum];gi|970019844|ref|XP_015071126.1|//PREDICTED: uncharacterized protein LOC107015388 [Solanum pennellii]
Solyc11g005770.2.1	2200	214.91004128186	87.0924828760483	-1.30311278419319	0.0166202675862748	Down	0.00326206859310817	NA	NA	NA	K01051//pectinesterase [EC:3.1.1.11]	gi|460408931|ref|XP_004249894.1|//PREDICTED: probable pectinesterase/pectinesterase inhibitor 51 [Solanum lycopersicum]
Solyc02g085630.3.1	970	502.71602939254	64.2451818291885	-2.96808352469627	8.50429437655231e-06	Down	4.63608824365098e-07	NA	GO:0003677//DNA binding	GO:0006351//transcription, DNA-templated	K09338//homeobox-leucine zipper protein	gi|460373143|ref|XP_004232382.1|//PREDICTED: homeobox-leucine zipper protein ATHB-40 [Solanum lycopersicum]
Solyc09g007850.3.1	1530	5911.38146646471	14930.7080403773	1.33671535518408	2.56444800073975e-06	Up	1.18284922833218e-07	GO:0009532//plastid stroma;GO:0030529//intracellular ribonucleoprotein complex;GO:0009526//plastid envelope;GO:0009534//chloroplast thylakoid;GO:0009507//chloroplast	GO:0003723//RNA binding;GO:0008187//poly-pyrimidine tract binding;GO:0000166//nucleotide binding	GO:0006397//mRNA processing;GO:0006952//defense response;GO:0009725//response to hormone	K11294//nucleolin	gi|460402307|ref|XP_004246655.1|//PREDICTED: 29 kDa ribonucleoprotein A, chloroplastic [Solanum lycopersicum]
Solyc06g068040.3.1	2680	227.113389769195	102.410002159837	-1.14905613746637	0.037443304819215	Down	0.00892131111437504	NA	GO:0016798//hydrolase activity, acting on glycosyl bonds	GO:0008152//metabolic process	K01213//galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]	gi|460392190|ref|XP_004241700.1|//PREDICTED: probable polygalacturonase At1g80170 [Solanum lycopersicum]
Solyc06g035960.3.1	5154	19129.6325709844	8976.86933077623	-1.09152486350152	0.000172085134147041	Down	1.44245928848611e-05	NA	GO:0003824//catalytic activity	NA	K07375//tubulin beta;K12261//2-hydroxyacyl-CoA lyase 1 [EC:4.1.-.-]	gi|460390213|ref|XP_004240733.1|//PREDICTED: oxalate--CoA ligase-like isoform X1 [Solanum lycopersicum]
Solyc05g052280.3.1	1260	777.207958631004	287.490611416702	-1.43478583151374	1.88089781419781e-06	Down	8.35718705254935e-08	NA	GO:0016209//antioxidant activity;GO:0005506//iron ion binding;GO:0003824//catalytic activity	GO:0008152//metabolic process;GO:0006950//response to stress	K00430//peroxidase [EC:1.11.1.7]	gi|460388619|ref|XP_004239964.1|//PREDICTED: peroxidase P7-like [Solanum lycopersicum]
Solyc05g015060.3.1	6401	97.3579273901701	283.768487106796	1.54334402436713	0.000123625383819684	Up	9.77189358183429e-06	NA	NA	NA	K08900//mitochondrial chaperone BCS1	gi|460387043|ref|XP_004239200.1|//PREDICTED: ATP-dependent zinc metalloprotease FTSH 4, mitochondrial-like [Solanum lycopersicum]
Solyc08g006350.3.1	2051	1237.1153489262	599.754628668158	-1.04453573198895	0.00279000601712933	Down	0.000382049228838049	NA	GO:0016757//transferase activity, transferring glycosyl groups	NA	K13691//pathogen-inducible salicylic acid glucosyltransferase [EC:2.4.1.-]	gi|460397864|ref|XP_004244486.1|//PREDICTED: UDP-glycosyltransferase 74E1-like [Solanum lycopersicum];gi|809279626|ref|NP_001234680.2|//UDP-xylose phenolic glycosyltransferase [Solanum lycopersicum]
Solyc00g117653.1.1	757	20.0830591038545	80.9776785235965	2.01154524318532	0.0130192767999071	Up	0.00241870537388792	GO:0016021//integral component of membrane;GO:0005743//mitochondrial inner membrane;GO:0070469//respiratory chain;GO:0005886//plasma membrane	GO:0008137//NADH dehydrogenase (ubiquinone) activity	GO:0055114//oxidation-reduction process	K03878//NADH-ubiquinone oxidoreductase chain 1 [EC:1.6.5.3]	gi|973606728|gb|KUM49827.1|//hypothetical protein ABT39_MTgene3054 (mitochondrion) [Picea glauca];gi|57013995|ref|YP_173351.1|//NADH dehydrogenase subunit 1 [Nicotiana tabacum]
Solyc08g076930.1.1	2070	9549.90376936241	3936.71094281117	-1.27849541078139	5.25896209231425e-10	Down	1.08819757365419e-11	NA	NA	NA	K13422//transcription factor MYC2	gi|723725533|ref|XP_004245895.2|//PREDICTED: transcription factor MYC2 [Solanum lycopersicum]
Solyc07g009230.3.1	772	34.4443260075726	98.2142955268492	1.51166668224988	0.00958358657327023	Up	0.00167838959738799	NA	NA	NA	NA	gi|697178210|ref|XP_009598086.1|//PREDICTED: defensin Lc-def {ECO:0000303|PubMed:18468512, ECO:0000312|EMBL:ABP04037.1}-like [Nicotiana tomentosiformis]
Solyc11g068890.1.1	630	18.0184684703069	5.06240276198892	-1.83158219334293	0.0467767734101179	Down	0.0118420206274147	NA	NA	NA	NA	gi|460411386|ref|XP_004251093.1|//PREDICTED: protein YLS9-like [Solanum lycopersicum]
Solyc03g063220.2.1	6781	179.196459066309	77.5637489993891	-1.20808768784806	0.00179659741979693	Down	0.000224608473513363	NA	NA	NA	K11320//E1A-binding protein p400 [EC:3.6.4.-]	gi|723681580|ref|XP_010317903.1|//PREDICTED: protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 [Solanum lycopersicum];gi|565354422|ref|XP_006344109.1|//PREDICTED: protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 [Solanum tuberosum];gi|970018104|ref|XP_015070206.1|//PREDICTED: protein PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1 [Solanum pennellii]
Solyc09g007520.3.1	1513	175.407791717579	48.9080279043666	-1.84256963672993	6.74124917986104e-06	Down	3.53040589103332e-07	NA	GO:0016209//antioxidant activity;GO:0005506//iron ion binding;GO:0003824//catalytic activity	GO:0008152//metabolic process;GO:0006950//response to stress	K00430//peroxidase [EC:1.11.1.7]	gi|460402345|ref|XP_004246673.1|//PREDICTED: peroxidase 21 [Solanum lycopersicum]
Solyc07g005080.1.1	1161	8.26867749257427	2.07989817785723	-1.99114369810513	0.0394883497268345	Down	0.00954227502992693	NA	NA	NA	K01183//chitinase [EC:3.2.1.14]	gi|723713936|ref|XP_004242978.2|//PREDICTED: serine/threonine-protein kinase WNK2-like [Solanum lycopersicum]
Solyc02g091820.2.1	1989	14.6442650762925	47.0703942040801	1.68448414206903	0.00146668296260586	Up	0.000177127626409511	NA	NA	NA	K01681//aconitate hydratase [EC:4.2.1.3];K13422//transcription factor MYC2	gi|460375643|ref|XP_004233614.1|//PREDICTED: transcription factor bHLH18-like [Solanum lycopersicum]
Solyc09g082510.3.1	6358	1981.30412914443	624.047715613589	-1.66672210113804	5.91578506281452e-09	Down	1.50899257809942e-10	NA	NA	NA	K20478//golgin subfamily B member 1	gi|723731994|ref|XP_004247588.2|//PREDICTED: LOW QUALITY PROTEIN: golgin subfamily B member 1 [Solanum lycopersicum]
Solyc04g077650.3.1	1608	85.4902671076773	346.212716145149	2.01782662825751	3.89664771728557e-11	Up	6.39179234287625e-13	NA	NA	NA	K16296//serine carboxypeptidase-like clade I [EC:3.4.16.-]	gi|460384740|ref|XP_004238067.1|//PREDICTED: uncharacterized protein LOC101252078 [Solanum lycopersicum]
Solyc05g050695.1.1	2200	9.82543667685235	32.7199368432454	1.73557653122586	0.0444501913477034	Up	0.011084118444416	GO:0016021//integral component of membrane	GO:0004622//lysophospholipase activity;GO:0008374//O-acyltransferase activity	GO:0006629//lipid metabolic process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13418//somatic embryogenesis receptor kinase 1 [EC:2.7.10.1 2.7.11.1];K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1];K06129//lysophospholipase III [EC:3.1.1.5]	gi|460388826|ref|XP_004240065.1|//PREDICTED: lecithin-cholesterol acyltransferase-like 1 [Solanum lycopersicum];gi|460389246|ref|XP_004240268.1|//PREDICTED: LRR receptor-like serine/threonine-protein kinase FLS2 [Solanum lycopersicum]
Solyc09g008830.3.1	822	153.699734389214	36.3198229330112	-2.08128559757979	0.0133453769208814	Down	0.00249284410881024	NA	NA	NA	NA	gi|723728027|ref|XP_010325945.1|//PREDICTED: putative DNA helicase INO80 [Solanum lycopersicum]
Solyc02g070820.1.1	324	7.65437594292352	49.5092963832833	2.69334278064176	6.16623520152433e-07	Up	2.39875364874949e-08	NA	NA	NA	NA	gi|723675718|ref|XP_010316919.1|//PREDICTED: uncharacterized protein LOC104645888 [Solanum lycopersicum]
Solyc06g061120.3.1	1417	49.1924926582029	9.73142448499946	-2.3377152533179	0.0138966587939943	Down	0.00261568788360998	NA	NA	NA	NA	gi|460392733|ref|XP_004241968.1|//PREDICTED: germinal-center associated nuclear protein isoform X1 [Solanum lycopersicum]
Solyc09g091550.3.1	1428	92.1904868688132	31.263641235146	-1.56013206979854	0.0294279301377073	Down	0.00657303428922595	NA	GO:0016741//transferase activity, transferring one-carbon groups	GO:0006730//one-carbon metabolic process	K08241//jasmonate O-methyltransferase [EC:2.1.1.141]	gi|350537529|ref|NP_001234809.1|//S-adenosyl-L-methionine: salicylic acid carboxyl methyltransferase [Solanum lycopersicum]
Solyc12g009780.1.1	3864	143.634127057972	415.684631306486	1.53309083951604	0.01132754326145	Up	0.00204560600658239	NA	NA	NA	K13466//EIX receptor 1/2;K10406//kinesin family member C2/C3	gi|723747981|ref|XP_010313802.1|//PREDICTED: receptor-like protein 12 [Solanum lycopersicum]
Solyc06g082535.1.1	1020	6327.35566556087	890.65141656657	-2.82866988825323	2.3580271217587e-28	Down	4.16957391733103e-31	NA	GO:0016709//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen;GO:0005506//iron ion binding	GO:0008152//metabolic process	K00487//trans-cinnamate 4-monooxygenase [EC:1.14.13.11]	gi|460393763|ref|XP_004242478.1|//PREDICTED: trans-cinnamate 4-monooxygenase [Solanum lycopersicum]
Solyc01g103650.3.1	1962	13126.6377752847	6161.05445478749	-1.09124824303449	1.26773405641379e-08	Down	3.45789010872835e-10	NA	NA	NA	K13696//abhydrolase domain-containing protein 1/3	gi|460369218|ref|XP_004230460.1|//PREDICTED: abhydrolase domain-containing protein 3 [Solanum lycopersicum]
Solyc03g007530.3.1	6964	3822.00260198993	1035.88716002497	-1.88346190277452	4.3974155685338e-11	Down	7.36211410081843e-13	NA	NA	NA	K05666//ATP-binding cassette, subfamily C (CFTR/MRP), member 2	gi|460376814|ref|XP_004234191.1|//PREDICTED: ABC transporter C family member 10-like [Solanum lycopersicum];gi|697106942|ref|XP_009607298.1|//PREDICTED: ABC transporter C family member 10-like isoform X1 [Nicotiana tomentosiformis]
Solyc04g077745.1.1	2457	795.005671022388	255.049509620774	-1.64018782473251	3.53253488882839e-05	Down	2.34173306023914e-06	GO:0043231//intracellular membrane-bounded organelle;GO:0019866//organelle inner membrane	GO:0016491//oxidoreductase activity	GO:0006091//generation of precursor metabolites and energy	K03937//NADH dehydrogenase (ubiquinone) Fe-S protein 4;K03549//KUP system potassium uptake protein;K12447//UDP-sugar pyrophosphorylase [EC:2.7.7.64];K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|697102004|ref|XP_009598759.1|//PREDICTED: uncharacterized protein LOC104094510 [Nicotiana tomentosiformis];gi|970066772|ref|XP_015060425.1|//PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Solanum pennellii];gi|698504029|ref|XP_009797569.1|//PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial-like [Nicotiana sylvestris];gi|970028100|ref|XP_015075346.1|//PREDICTED: uncharacterized mitochondrial protein AtMg00810-like [Solanum pennellii]
Solyc12g005720.1.1	723	2550.93996653391	481.89840150797	-2.40422802648147	3.19187567984381e-40	Down	2.88205478992669e-43	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460412234|ref|XP_004251507.1|//PREDICTED: cysteine-rich repeat secretory protein 38 [Solanum lycopersicum]
Solyc10g009420.3.1	1287	396.865664358867	138.170770854809	-1.52219829496808	0.000205787471296501	Down	1.77063937868735e-05	GO:0043231//intracellular membrane-bounded organelle	GO:0019787//ubiquitin-like protein transferase activity;GO:0046914//transition metal ion binding	GO:0032446//protein modification by small protein conjugation;GO:0032501//multicellular organismal process;GO:0019941//modification-dependent protein catabolic process	K04506//E3 ubiquitin-protein ligase SIAH1 [EC:2.3.2.27]	gi|460405236|ref|XP_004248082.1|//PREDICTED: E3 ubiquitin-protein ligase SINAT3-like [Solanum lycopersicum]
Solyc11g068960.2.1	3826	4846.62504377763	967.874538341925	-2.32408851957551	5.73759934890847e-26	Down	1.20882454303564e-28	NA	NA	NA	K08867//WNK lysine deficient protein kinase [EC:2.7.11.1]	gi|460411402|ref|XP_004251101.1|//PREDICTED: transcription factor LHW-like [Solanum lycopersicum]
Solyc11g008870.2.1	2232	2972.01590685373	1006.95806968359	-1.56143822756469	3.21878783362387e-07	Down	1.17344071135498e-08	NA	NA	NA	K00297//methylenetetrahydrofolate reductase (NADPH) [EC:1.5.1.20]	gi|460409333|ref|XP_004250093.1|//PREDICTED: methylenetetrahydrofolate reductase 2-like [Solanum lycopersicum]
Solyc03g025830.3.1	4757	236.644464913116	94.4545623739363	-1.32502878908114	0.000121769505423915	Down	9.60687181617571e-06	NA	NA	NA	K20478//golgin subfamily B member 1	gi|723679608|ref|XP_010317600.1|//PREDICTED: early endosome antigen 1 isoform X1 [Solanum lycopersicum]
Solyc06g060880.3.1	1661	93.9388316765246	220.800639945741	1.23295079755418	7.07969362294768e-06	Up	3.75293014098318e-07	NA	GO:0016709//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	GO:0008152//metabolic process	K00480//salicylate hydroxylase [EC:1.14.13.1];K09838//zeaxanthin epoxidase [EC:1.14.13.90]	gi|731438900|ref|XP_010647177.1|//PREDICTED: zeaxanthin epoxidase, chloroplastic isoform X1 [Vitis vinifera];gi|731438902|ref|XP_002265622.3|//PREDICTED: zeaxanthin epoxidase, chloroplastic isoform X2 [Vitis vinifera];gi|460392771|ref|XP_004241987.1|//PREDICTED: zeaxanthin epoxidase, chloroplastic-like [Solanum lycopersicum]
Solyc02g081210.3.1	1474	175.614783661885	75.3182057396253	-1.22134376240053	0.033810302523048	Down	0.00784200583350605	GO:0044464//cell part	NA	NA	K20628	gi|460373750|ref|XP_004232677.1|//PREDICTED: expansin-A13-like [Solanum lycopersicum]
Solyc07g032250.3.1	1246	535.26797257316	221.023244396356	-1.27606323067586	2.25281903584154e-06	Down	1.02025601636347e-07	NA	NA	NA	K11426//SET and MYND domain-containing protein	gi|460395152|ref|XP_004243151.1|//PREDICTED: nucleophosmin [Solanum lycopersicum]
Solyc02g079540.2.1	3235	97.7079698714451	245.644824937099	1.33002569551553	0.00141121608464153	Up	0.000169791912666803	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|970008484|ref|XP_015065102.1|//PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC107010336 [Solanum pennellii]
Solyc10g080980.2.1	2299	36.3785516205685	11.9609738422313	-1.60475324841796	0.0131187552473909	Down	0.00243916058813415	NA	NA	NA	K00801//farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21]	gi|460407776|ref|XP_004249326.1|//PREDICTED: WAT1-related protein At5g07050 [Solanum lycopersicum]
Solyc12g008660.1.1	1218	114.881009790617	38.4796703765529	-1.57797198954902	2.31041555715107e-05	Down	1.44292318467674e-06	NA	NA	NA	K15172//transcription elongation factor SPT5;K07560//D-tyrosyl-tRNA(Tyr) deacylase [EC:3.1.-.-]	gi|460412528|ref|XP_004251650.1|//PREDICTED: zinc finger CCCH domain-containing protein 20 [Solanum lycopersicum]
Solyc02g088600.3.1	2538	281.381966193081	618.265590419501	1.13569684559503	2.93000529491617e-07	Up	1.06154819375631e-08	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial	gi|723671152|ref|XP_010316227.1|//PREDICTED: pentatricopeptide repeat-containing protein At3g29290 [Solanum lycopersicum]
Solyc02g090160.3.1	3916	647.503966726342	265.022967326518	-1.28877163961662	4.59860718223067e-09	Down	1.1453265442576e-10	NA	NA	NA	K04630//guanine nucleotide-binding protein G(i) subunit alpha	gi|460372508|ref|XP_004232071.1|//PREDICTED: extra-large guanine nucleotide-binding protein 1 [Solanum lycopersicum]
Solyc02g087705.1.1	237	18.1437875281711	94.7134602323047	2.38409381841939	4.36801966177197e-09	Up	1.07803645527555e-10	NA	GO:0016829//lyase activity	NA	K01728//pectate lyase [EC:4.2.2.2]	gi|565342700|ref|XP_006338480.1|//PREDICTED: probable pectate lyase P59 [Solanum tuberosum]
Solyc09g064420.3.1	2888	767.054694646717	343.141655924761	-1.16052517889687	1.54404522870726e-13	Down	1.58587038162935e-15	NA	NA	NA	K12831//splicing factor 3B subunit 4;K02184//formin 2	gi|723730236|ref|XP_010326339.1|//PREDICTED: uncharacterized protein LOC101254939 isoform X1 [Solanum lycopersicum];gi|723730239|ref|XP_010326340.1|//PREDICTED: uncharacterized protein LOC101254939 isoform X2 [Solanum lycopersicum]
Solyc05g056385.1.1	2115	476.537434811884	1006.95327438314	1.07933528371046	3.46723357261245e-11	Up	5.60914385336099e-13	NA	NA	NA	K09580//protein disulfide-isomerase A1 [EC:5.3.4.1];K04078//chaperonin GroES	gi|723700932|ref|XP_010321305.1|//PREDICTED: protein disulfide-isomerase-like isoform X2 [Solanum lycopersicum];gi|723700938|ref|XP_004239644.2|//PREDICTED: uncharacterized protein LOC101245255 [Solanum lycopersicum]
Solyc03g113490.3.1	2552	451.74272290644	210.176907225182	-1.10389719627436	0.00014591893315297	Down	1.18415025888245e-05	NA	GO:0016614//oxidoreductase activity, acting on CH-OH group of donors;GO:0048037//cofactor binding	GO:0044238//primary metabolic process	NA	gi|723687588|ref|XP_010318956.1|//PREDICTED: HIPL1 protein-like [Solanum lycopersicum]
Solyc12g096640.2.1	1967	3.63301371004066	30.8719809412895	3.08705934312038	5.04659772275518e-05	Up	3.49540496899635e-06	NA	NA	NA	K15191//La-related protein 7	gi|460415387|ref|XP_004253040.1|//PREDICTED: la-related protein 6B-like [Solanum lycopersicum]
Solyc09g007010.1.1	480	397.851608299791	2958.01499701803	2.89432703070345	1.41453609642011e-09	Up	3.15050928924269e-11	NA	NA	GO:0006952//defense response;GO:0001906//cell killing	K13449//pathogenesis-related protein 1	gi|350539763|ref|NP_001234523.1|//pathogenesis-related leaf protein 4 precursor [Solanum lycopersicum]
BGI_novel_G000217	1015	328.991204824882	129.829204168536	-1.34143407182994	0.000532958062862525	Down	5.36767770610601e-05	NA	NA	NA	K11982//E3 ubiquitin-protein ligase RNF115/126 [EC:2.3.2.27]	gi|460387765|ref|XP_004239544.1|//PREDICTED: E3 ubiquitin-protein ligase RING1-like [Solanum lycopersicum]
BGI_novel_G000342	2623	314.724767752054	58.0716652824881	-2.43818440726838	1.19500954701357e-10	Down	2.17151847707884e-12	NA	NA	NA	K01209//alpha-N-arabinofuranosidase [EC:3.2.1.55];K05658//ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:3.6.3.44]	gi|56407681|gb|AAV88069.1|//hypothetical retrotransposon [Ipomoea batatas]
Solyc07g042430.1.1	1542	2.15928153984911	20.0561978050193	3.21542486217297	0.000155983512685728	Up	1.28343093394916e-05	GO:0005789//endoplasmic reticulum membrane	GO:0016709//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen;GO:0000166//nucleotide binding;GO:0050662//coenzyme binding	GO:0008152//metabolic process	K00485//dimethylaniline monooxygenase (N-oxide forming) [EC:1.14.13.8]	gi|460396718|ref|XP_004243918.1|//PREDICTED: probable flavin-containing monooxygenase 1 [Solanum lycopersicum]
Solyc06g059965.1.1	4058	300.933439140527	128.460169154527	-1.22812332377664	1.05224542755293e-06	Down	4.36654140929603e-08	NA	NA	NA	K11423//histone-lysine N-methyltransferase SETD2 [EC:2.1.1.43]	gi|723710724|ref|XP_010322942.1|//PREDICTED: histone-lysine N-methyltransferase ASHH2-like [Solanum lycopersicum]
Solyc06g065410.3.1	1817	8.31800077499815	1.19992447061613	-2.79329322131554	0.00333104691702038	Down	0.000473715475783937	NA	NA	NA	K12581//CCR4-NOT transcription complex subunit 7/8;K03094//S-phase kinase-associated protein 1;K13126//polyadenylate-binding protein;K01054//acylglycerol lipase [EC:3.1.1.23]	gi|460393268|ref|XP_004242232.1|//PREDICTED: NAC domain-containing protein 7-like [Solanum lycopersicum]
Solyc09g091230.3.1	1176	212.129318532985	101.145466479993	-1.06851237329859	5.12514664466525e-05	Down	3.5660260293735e-06	NA	GO:0008194//UDP-glycosyltransferase activity	NA	K20891	gi|460404954|ref|XP_004247943.1|//PREDICTED: xylosyltransferase 1 [Solanum lycopersicum]
Solyc08g081710.3.1	1851	90.4035890365574	7.9074667137302	-3.51509256611324	5.97308306233049e-05	Down	4.24947331484836e-06	NA	NA	NA	K14499//BRI1 kinase inhibitor 1	gi|460400075|ref|XP_004245561.1|//PREDICTED: probable membrane-associated kinase regulator 2 [Solanum lycopersicum]
Solyc10g006860.3.1	3925	98.8150805170166	241.576764596177	1.28967856114859	2.64131272810977e-05	Up	1.6803836806748e-06	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723734582|ref|XP_010327142.1|//PREDICTED: receptor-like protein kinase THESEUS 1 [Solanum lycopersicum]
Solyc03g116245.1.1	2748	64.1872207676694	6.339017433989	-3.33995495440994	0.000166110302506072	Down	1.38425252088393e-05	NA	NA	NA	K01363//cathepsin B [EC:3.4.22.1];K19986//exocyst complex component 8	gi|565393888|ref|XP_006362602.1|//PREDICTED: cathepsin B-like [Solanum tuberosum];gi|460374859|ref|XP_004233226.1|//PREDICTED: exocyst complex component EXO84C [Solanum lycopersicum]
Solyc04g071800.3.1	2596	44.234760079001	203.454289875671	2.20145229690611	1.67065316899321e-12	Up	2.14331350875352e-14	NA	NA	NA	K07410//cytochrome P450, family 1, subfamily B, polypeptide 1 [EC:1.14.14.1];K20562;K05280//flavonoid 3'-monooxygenase [EC:1.14.13.21]	gi|460384239|ref|XP_004237820.1|//PREDICTED: cytochrome P450 71A1-like [Solanum lycopersicum]
Solyc10g086500.1.1	774	883.684368987982	368.798098408608	-1.26069994832594	0.000774732430335538	Down	8.28363268251918e-05	GO:0031224//intrinsic component of membrane;GO:0044424//intracellular part	GO:0033765//steroid dehydrogenase activity, acting on the CH-CH group of donors	GO:0006629//lipid metabolic process	K09591//steroid 5-alpha-reductase [EC:1.3.1.22]	gi|350537499|ref|NP_001234040.1|//steroid 5-alpha-reductase DET2 [Solanum lycopersicum]
Solyc01g110110.3.1	1334	364.321436461497	47.6807502586932	-2.93373304295459	6.12697761489736e-05	Down	4.37509537737968e-06	NA	GO:0004175//endopeptidase activity	GO:0019538//protein metabolic process	K01373//cathepsin F [EC:3.4.22.41]	gi|460370172|ref|XP_004230928.1|//PREDICTED: cysteine proteinase RD19a [Solanum lycopersicum]
Solyc01g097270.3.1	1023	4166.8913719039	1867.65367733004	-1.15774453233902	0.00891404341777959	Down	0.00153899718751657	NA	GO:0030247//polysaccharide binding	GO:0006952//defense response	K20547	gi|460368474|ref|XP_004230091.1|//PREDICTED: wound-induced protein WIN2 [Solanum lycopersicum]
Solyc10g074600.2.1	504	3.84164122332496	18.9275086290892	2.30068983099979	0.0135345879124458	Up	0.0025342981204004	NA	NA	NA	K20131//Rab5 GDP/GTP exchange factor;K01183//chitinase [EC:3.2.1.14]	gi|460407128|ref|XP_004249008.1|//PREDICTED: pentatricopeptide repeat-containing protein At1g63150-like [Solanum lycopersicum]
Solyc01g096370.3.1	1885	998.796992555144	385.119055176051	-1.37488696969791	0.00137201092842379	Down	0.000164249013327483	NA	NA	NA	K13422//transcription factor MYC2	gi|460368332|ref|XP_004230021.1|//PREDICTED: transcription factor MYC2-like isoform X1 [Solanum lycopersicum];gi|460368334|ref|XP_004230022.1|//PREDICTED: transcription factor MYC2-like isoform X2 [Solanum lycopersicum]
Solyc04g081630.2.1	2105	554.1841218378	91.9274227645162	-2.59179817660809	3.96355290036386e-09	Down	9.66283777063875e-11	GO:0031090//organelle membrane;GO:0009536//plastid	NA	GO:0006970//response to osmotic stress;GO:0015031//protein transport;GO:0010073//meristem maintenance;GO:0010038//response to metal ion;GO:0009933//meristem structural organization	K09487//heat shock protein 90kDa beta	gi|723696102|ref|XP_010320432.1|//PREDICTED: endoplasmin homolog [Solanum lycopersicum]
Solyc07g055110.3.1	1229	20.5031039150717	5.16870503622027	-1.98796755325239	0.0478583194439673	Down	0.0122058520508147	NA	NA	NA	NA	gi|723714950|ref|XP_010323688.1|//PREDICTED: uncharacterized protein LOC104648382 [Solanum lycopersicum]
Solyc04g073970.3.1	1625	425.555318784082	130.963161198022	-1.70018563168578	3.52906904055626e-05	Down	2.33805378013864e-06	NA	NA	NA	K18635//protein SPIRAL1 and related proteins	gi|460384403|ref|XP_004237901.1|//PREDICTED: uncharacterized protein LOC101251468 [Solanum lycopersicum]
Solyc07g052760.2.1	657	249.069075002276	120.264124021374	-1.05033956783264	0.0010154621585539	Down	0.000114344553820611	NA	NA	NA	NA	gi|460395746|ref|XP_004243442.1|//PREDICTED: DNA ligase 1-like [Solanum lycopersicum]
Solyc09g008010.3.1	2129	3987.56884274426	10805.8643643775	1.43823314704549	3.6229847641462e-14	Up	3.40762299110817e-16	NA	GO:0005524//ATP binding;GO:0004672//protein kinase activity	GO:0006468//protein phosphorylation	K00924;K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460402287|ref|XP_004246645.1|//PREDICTED: probable receptor-like protein kinase At5g47070 isoform X1 [Solanum lycopersicum];gi|723728264|ref|XP_010325981.1|//PREDICTED: probable receptor-like protein kinase At5g47070 isoform X2 [Solanum lycopersicum]
Solyc10g005280.1.1	1209	61.3957842462427	2.22156125436134	-4.78849377009983	4.33611437521674e-09	Down	1.06689947381179e-10	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial;K20291//conserved oligomeric Golgi complex subunit 4	gi|460405880|ref|XP_004248402.1|//PREDICTED: pentatricopeptide repeat-containing protein At1g61870, mitochondrial-like [Solanum lycopersicum]
Solyc10g085190.2.1	1218	70.7613868781345	8.83466885247827	-3.00171435945791	0.000232084306238056	Down	2.03619489144901e-05	NA	NA	NA	K05277//leucoanthocyanidin dioxygenase [EC:1.14.11.19]	gi|460408448|ref|XP_004249657.1|//PREDICTED: probable 2-oxoglutarate/Fe(II)-dependent dioxygenase [Solanum lycopersicum]
Solyc03g117890.3.1	2465	1945.80915821758	5207.67633899496	1.42026956682138	2.95150727674265e-13	Up	3.3201680803087e-15	NA	NA	NA	NA	gi|820867009|ref|NP_001295218.1|//uncharacterized protein LOC101249904 [Solanum lycopersicum]
Solyc11g071710.2.1	770	105.545236088013	248.991911189727	1.23823741295376	1.08198113982032e-06	Up	4.51843139654084e-08	NA	NA	NA	K14493//gibberellin receptor GID1 [EC:3.-.-.-]	gi|460412083|ref|XP_004251432.1|//PREDICTED: uncharacterized protein LOC101260110 [Solanum lycopersicum];gi|460412085|ref|XP_004251433.1|//PREDICTED: probable carboxylesterase 15 [Solanum lycopersicum]
Solyc05g015840.3.1	1627	6759.36658955691	14580.1287908429	1.1090434984047	1.39654080832393e-05	Up	8.08606585406518e-07	GO:0005634//nucleus	GO:0003677//DNA binding	NA	K20641;K13415//protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1]	gi|460387122|ref|XP_004239238.1|//PREDICTED: squamosa promoter-binding-like protein 13A [Solanum lycopersicum]
Solyc12g089220.2.1	1345	1186.16966322587	2899.28795719865	1.28938824908931	0.000720438960647011	Up	7.61908923393058e-05	NA	GO:0004518//nuclease activity	GO:0090305//nucleic acid phosphodiester bond hydrolysis	K08999//uncharacterized protein	gi|723752519|ref|XP_004252794.2|//PREDICTED: bifunctional nuclease 1-like [Solanum lycopersicum]
Solyc03g114640.3.1	3559	448.034920853096	930.005254644254	1.05362768407498	0.000128429282654933	Up	1.02530826859957e-05	NA	NA	NA	K04773//protease IV [EC:3.4.21.-]	gi|970017716|ref|XP_015070002.1|//PREDICTED: serine protease SPPA, chloroplastic isoform X1 [Solanum pennellii];gi|971546474|ref|XP_015163172.1|//PREDICTED: serine protease SPPA, chloroplastic isoform X3 [Solanum tuberosum]
Solyc04g039965.1.1	4915	162.632117437249	41.1655347165854	-1.98210332537752	5.3771723018656e-06	Down	2.72595278432056e-07	NA	NA	NA	K15078//structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]	gi|971537853|ref|XP_015170299.1|//PREDICTED: uncharacterized protein LOC102587762 [Solanum tuberosum];gi|565346075|ref|XP_006340095.1|//PREDICTED: putative disease resistance protein RGA1 [Solanum tuberosum]
Solyc06g036260.3.1	1128	192.195757771619	77.9221467180115	-1.30247116402919	2.70872057650221e-05	Down	1.72836346792617e-06	GO:0031224//intrinsic component of membrane	GO:0046914//transition metal ion binding;GO:0003824//catalytic activity	GO:0006631//fatty acid metabolic process	K15746//beta-carotene 3-hydroxylase [EC:1.14.13.129]	gi|350538547|ref|NP_001234348.1|//beta-carotene hydroxylase [Solanum lycopersicum]
Solyc02g064770.3.1	1185	387.164740842986	930.816868128962	1.26554978317276	1.64949108719369e-15	Up	1.25356358018482e-17	NA	NA	NA	K05605//3-hydroxyisobutyryl-CoA hydrolase [EC:3.1.2.4]	gi|460375309|ref|XP_004233449.1|//PREDICTED: probable esterase KAI2 [Solanum lycopersicum]
Solyc03g034050.3.1	730	197.976166614166	407.280247304484	1.04069508499951	7.95910142525425e-06	Up	4.30294535293091e-07	NA	NA	NA	NA	gi|970014278|ref|XP_015068123.1|//PREDICTED: protein AE7-like 1 [Solanum pennellii];gi|460377558|ref|XP_004234558.1|//PREDICTED: MIP18 family protein At1g68310 [Solanum lycopersicum]
Solyc01g108400.3.1	5050	1124.74027603358	430.193275211148	-1.38653501630405	1.11845163174521e-09	Down	2.44897987086423e-11	NA	GO:0046872//metal ion binding;GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process	K00924	gi|460369917|ref|XP_004230803.1|//PREDICTED: CDPK-related kinase 5 [Solanum lycopersicum]
Solyc09g090440.1.1	4003	144.588286980557	56.537385118355	-1.3546736205973	6.46123526384363e-06	Down	3.36674598962506e-07	NA	NA	NA	K19589//release factor glutamine methyltransferase [EC:2.1.1.297];K03452//magnesium/proton exchanger	gi|723732541|ref|XP_010326776.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Solanum lycopersicum]
Solyc04g039980.3.1	877	81.9576666620193	273.704708303865	1.73966943588126	3.27534335002783e-13	Up	3.70909837606613e-15	NA	NA	NA	K19613//leucine-rich repeat protein SHOC2;K15078//structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]	gi|565346075|ref|XP_006340095.1|//PREDICTED: putative disease resistance protein RGA1 [Solanum tuberosum]
Solyc03g111973.1.1	3338	28.5713167633232	76.6435295862602	1.4235964744228	0.000544963887696748	Up	5.50499638248973e-05	NA	NA	NA	K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30];K07408//cytochrome P450, family 1, subfamily A, polypeptide 1 [EC:1.14.14.1]	gi|460381083|ref|XP_004236282.1|//PREDICTED: cytochrome P450 71A4-like [Solanum lycopersicum]
Solyc12g099430.2.1	2159	24.7333298337833	89.9069443797023	1.86197607128781	2.89635912936166e-05	Up	1.87424292795412e-06	NA	NA	NA	K08726//soluble epoxide hydrolase / lipid-phosphate phosphatase [EC:3.3.2.10 3.1.3.76];K10144//RING finger and CHY zinc finger domain-containing protein 1 [EC:2.3.2.27]	gi|460415130|ref|XP_004252913.1|//PREDICTED: bifunctional epoxide hydrolase 2 [Solanum lycopersicum]
Solyc11g072920.2.1	1816	395.952923267189	107.730512288067	-1.87790199233966	5.6482112874676e-07	Down	2.18661001309411e-08	NA	GO:0046872//metal ion binding;GO:0003824//catalytic activity	NA	K00430//peroxidase [EC:1.11.1.7]	gi|460411806|ref|XP_004251296.1|//PREDICTED: peroxidase 15-like [Solanum lycopersicum]
Solyc09g089570.3.1	1723	61.1137947186982	27.4842917538848	-1.15289076172591	0.0165881194119586	Down	0.00325040300716346	NA	NA	NA	NA	gi|970051278|ref|XP_015087224.1|//PREDICTED: uncharacterized protein LOC107030464 [Solanum pennellii]
Solyc01g066453.1.1	571	32.3812183762244	10.1150012339946	-1.67866077362776	0.00934938452729668	Down	0.00163033849827013	NA	GO:0003824//catalytic activity	NA	K08726//soluble epoxide hydrolase / lipid-phosphate phosphatase [EC:3.3.2.10 3.1.3.76]	gi|723658489|ref|XP_010321810.1|//PREDICTED: bifunctional epoxide hydrolase 2-like, partial [Solanum lycopersicum]
Solyc07g053810.3.1	1138	37.9588790441722	161.990345632469	2.09339853916601	5.08201521442289e-09	Up	1.27719569722893e-10	NA	NA	NA	K20641;K13415//protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1]	gi|723715289|ref|XP_004243367.2|//PREDICTED: squamosa promoter-binding-like protein 3 [Solanum lycopersicum]
Solyc02g030655.1.1	1290	1.78236773594461	9.83014508077583	2.46341768645929	0.00747522300788295	Up	0.00124868285007526	NA	NA	NA	K05747//Wiskott-Aldrich syndrome protein	gi|460371696|ref|XP_004231671.1|//PREDICTED: ninja-family protein AFP3-like isoform X1 [Solanum lycopersicum]
Solyc12g088000.2.1	1615	29.5255100575378	10.7691437865012	-1.45505843133902	0.0232825708288931	Down	0.00493507237445724	NA	GO:0016769//transferase activity, transferring nitrogenous groups;GO:0016846//carbon-sulfur lyase activity;GO:0048037//cofactor binding	GO:0008652//cellular amino acid biosynthetic process	K00815//tyrosine aminotransferase [EC:2.6.1.5]	gi|460414924|ref|XP_004252811.1|//PREDICTED: probable aminotransferase TAT2 [Solanum lycopersicum]
Solyc02g081845.1.1	3213	82.9667438228579	171.389458652272	1.04667330763697	0.00155810957753608	Up	0.000189589654967398	GO:0031224//intrinsic component of membrane;GO:0016021//integral component of membrane;GO:0005886//plasma membrane	GO:0005275//amine transmembrane transporter activity;GO:0015171//amino acid transmembrane transporter activity	GO:0003333//amino acid transmembrane transport;GO:0015837//amine transport	K03294//basic amino acid/polyamine antiporter, APA family	gi|723673500|ref|XP_004232627.2|//PREDICTED: cationic amino acid transporter 5 [Solanum lycopersicum];gi|720015137|ref|XP_010260734.1|//PREDICTED: cationic amino acid transporter 5-like [Nelumbo nucifera]
Solyc06g066300.1.1	1452	19.8344122825405	2.35756053739713	-3.07263892734362	0.00107198132140142	Down	0.000121797727262313	NA	NA	NA	K07561//2-(3-amino-3-carboxypropyl)histidine synthase [EC:2.5.1.108]	gi|460392311|ref|XP_004241760.1|//PREDICTED: diphthamide biosynthesis protein 1 [Solanum lycopersicum]
Solyc01g080620.3.1	3077	378.320689207317	161.263774927677	-1.23018727634051	0.0025346874470756	Down	0.000340342343815381	NA	NA	NA	K10485//BTB/POZ domain-containing protein 13 (germ cell-less protein-like 1)	gi|460367252|ref|XP_004229489.1|//PREDICTED: uncharacterized protein LOC101246086 [Solanum lycopersicum]
Solyc09g011590.3.1	1714	15747.9802797463	6943.59356896791	-1.1814124012594	9.25807837200719e-05	Down	7.02192851691742e-06	GO:0005737//cytoplasm	GO:0016765//transferase activity, transferring alkyl or aryl (other than methyl) groups;GO:0004364//glutathione transferase activity	GO:0006749//glutathione metabolic process;GO:0009407//toxin catabolic process;GO:0006950//response to stress	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|460401752|ref|XP_004246381.1|//PREDICTED: probable glutathione S-transferase [Solanum lycopersicum];gi|350536817|ref|NP_001234778.1|//glutathione S-transferase-like protein [Solanum lycopersicum]
Solyc02g084890.2.1	3092	2029.26740203855	967.115062038968	-1.06919953647841	6.63970667346725e-10	Down	1.40388079401377e-11	NA	GO:0032559//adenyl ribonucleotide binding;GO:0016791//phosphatase activity	GO:0012501//programmed cell death;GO:0006950//response to stress	K13457//disease resistance protein RPM1;K15078//structure-specific endonuclease subunit SLX1 [EC:3.6.1.-]	gi|460373248|ref|XP_004232433.1|//PREDICTED: disease resistance RPP13-like protein 4 [Solanum lycopersicum]
Solyc03g121240.1.1	1355	1630.35299809735	3892.41699831675	1.25548191032665	2.8748264952e-05	Up	1.85598279374086e-06	NA	GO:0046983//protein dimerization activity	NA	K16189//phytochrome-interacting factor 4;K10863//aprataxin [EC:3.-.-.-];K12126//phytochrome-interacting factor 3	gi|460379756|ref|XP_004235627.1|//PREDICTED: transcription factor bHLH87 [Solanum lycopersicum]
Solyc07g043120.1.1	1473	54.9469839379342	127.365928759593	1.21286720025349	2.85032926061072e-05	Up	1.8348056301373e-06	NA	NA	NA	K12938//anthocyanidin 5,3-O-glucosyltransferase [EC:2.4.1.-];K08237//hydroquinone glucosyltransferase [EC:2.4.1.218]	gi|460396175|ref|XP_004243654.1|//PREDICTED: anthocyanidin 3-O-glucosyltransferase 2-like [Solanum lycopersicum]
Solyc02g077575.1.1	1076	5.94987195849059	24.5923171793762	2.0472771504128	0.00892926282368476	Up	0.00154229667507663	NA	NA	NA	K08472//mlo protein	gi|565397459|ref|XP_006364311.1|//PREDICTED: MLO-like protein 12 [Solanum tuberosum]
Solyc08g041860.1.1	1332	10494.9512142987	4406.43015040414	-1.25201321911047	2.56559744388085e-14	Down	2.34552362250958e-16	NA	NA	NA	NA	gi|460398805|ref|XP_004244942.1|//PREDICTED: uncharacterized protein LOC101261347 [Solanum lycopersicum]
Solyc11g072510.2.1	1543	145.122960188229	305.579832654817	1.07427354392873	0.000421841494812485	Up	4.0946239902792e-05	GO:0005829//cytosol	GO:0045552//dihydrokaempferol 4-reductase activity;GO:0016616//oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;GO:0048037//cofactor binding;GO:0050662//coenzyme binding	GO:0008152//metabolic process;GO:0055114//oxidation-reduction process	K09753//cinnamoyl-CoA reductase [EC:1.2.1.44]	gi|460411759|ref|XP_004251273.1|//PREDICTED: cinnamoyl-CoA reductase 1 [Solanum lycopersicum];gi|228480464|gb|ACQ41893.1|//cinnamoyl-CoA reductase [Camellia oleifera]
Solyc04g040090.3.1	1722	35.132699795774	9.076770866755	-1.95256340198655	0.00906641781985747	Down	0.00157383189694591	NA	GO:0016843//amine-lyase activity	GO:0008152//metabolic process	K01757//strictosidine synthase [EC:4.3.3.2]	gi|460383237|ref|XP_004237337.1|//PREDICTED: strictosidine synthase 3-like [Solanum lycopersicum]
Solyc12g005920.2.1	2013	501.488034763758	1236.92775207913	1.30247405172933	0.00266121144142646	Up	0.000360434958206745	NA	NA	NA	K17275//plastin-1	gi|460412269|ref|XP_004251524.1|//PREDICTED: fimbrin-5 [Solanum lycopersicum];gi|970067477|ref|XP_015060831.1|//PREDICTED: fimbrin-5 [Solanum pennellii]
Solyc02g071380.2.1	1406	39.5794194080499	161.956858695012	2.03278721126962	8.14507085015763e-06	Up	4.41880818883646e-07	NA	NA	NA	K05278//flavonol synthase [EC:1.14.11.23]	gi|460374415|ref|XP_004233006.1|//PREDICTED: protein SRG1-like [Solanum lycopersicum]
Solyc01g015000.3.1	923	9.58092923330171	2.01891508554133	-2.24658535358841	0.0134108042832152	Down	0.00250708376536104	NA	NA	GO:0019222//regulation of metabolic process;GO:0019740//nitrogen utilization	K09458//3-oxoacyl-[acyl-carrier-protein] synthase II [EC:2.3.1.179]	gi|723654462|ref|XP_010318392.1|//PREDICTED: nitrogen regulatory protein P-II homolog [Solanum lycopersicum]
Solyc10g079960.1.1	3334	41.8543987266879	13.5684341034953	-1.62512501930408	0.00497261163069529	Down	0.000764396724768608	NA	NA	NA	K13024//inositol-hexakisphosphate/diphosphoinositol-pentakisphosphate 1-kinase [EC:2.7.4.24];K13495//cis-zeatin O-glucosyltransferase [EC:2.4.1.215]	gi|723738387|ref|XP_010312115.1|//PREDICTED: zeatin O-xylosyltransferase-like isoform X2 [Solanum lycopersicum]
Solyc08g076890.3.1	539	3.53945309305412	14.5955667794732	2.04393187388556	0.0412255293333653	Up	0.0100318556707376	NA	NA	NA	NA	gi|723725544|ref|XP_010325557.1|//PREDICTED: glycine-rich cell wall structural protein 1.8-like [Solanum lycopersicum]
Solyc08g036620.3.1	569	2064.41839032187	5112.29780753711	1.30823649263106	7.32763107589039e-06	Up	3.92019992096168e-07	NA	NA	NA	K13464//jasmonate ZIM domain-containing protein	gi|460398759|ref|XP_004244919.1|//PREDICTED: protein TIFY 5A-like [Solanum lycopersicum]
Solyc01g066290.2.1	606	792.862352075397	269.283308546977	-1.55794561548576	0.00126355961760639	Down	0.000148318510418808	NA	NA	NA	NA	NA
Solyc08g014470.3.1	2606	538.838352358968	1136.51653926189	1.07669423443065	1.49791424913827e-08	Up	4.15335892255419e-10	GO:0005783//endoplasmic reticulum;GO:0048471//perinuclear region of cytoplasm	GO:0016787//hydrolase activity;GO:0016810//hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	NA	K07047//uncharacterized protein;K20285//Rab9 effector protein with kelch motifs;K01880//glycyl-tRNA synthetase [EC:6.1.1.14]	gi|460398446|ref|XP_004244770.1|//PREDICTED: uncharacterized protein LOC101256311 [Solanum lycopersicum];gi|565368867|ref|XP_006351062.1|//PREDICTED: putative amidohydrolase YtcJ [Solanum tuberosum]
Solyc04g014650.3.1	2697	124.281415575396	279.371467765516	1.16857410661022	0.000172945305489437	Up	1.45097077216495e-05	NA	NA	NA	K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|971549588|ref|XP_015163996.1|//PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR [Solanum tuberosum];gi|971549558|ref|XP_015163992.1|//PREDICTED: LRR receptor-like serine/threonine-protein kinase EFR [Solanum tuberosum]
Solyc03g096670.3.1	1682	2476.64150663751	1152.97799616589	-1.10302007352118	0.00108479374685287	Down	0.000123661589652528	NA	GO:0004721//phosphoprotein phosphatase activity	NA	K14497//protein phosphatase 2C [EC:3.1.3.16]	gi|910749435|ref|NP_001234692.2|//protein phosphatase 2C AHG3 homolog [Solanum lycopersicum]
Solyc12g013580.2.1	2336	5447.89859116025	2601.96577679557	-1.06609786217313	3.87407397195438e-07	Down	1.43710945686494e-08	NA	NA	NA	NA	gi|460412928|ref|XP_004251848.1|//PREDICTED: peptidyl-prolyl cis-trans isomerase CYP37, chloroplastic isoform X2 [Solanum lycopersicum];gi|723748466|ref|XP_010313888.1|//PREDICTED: peptidyl-prolyl cis-trans isomerase CYP37, chloroplastic isoform X3 [Solanum lycopersicum]
Solyc00g025290.1.1	486	265.633134866911	701.324023887261	1.40064602989664	1.07418610375894e-08	Up	2.88924239029178e-10	GO:0043231//intracellular membrane-bounded organelle	NA	NA	NA	gi|57013963|ref|YP_173435.1|//hypothetical protein NitaMp096 [Nicotiana tabacum]
BGI_novel_G000533	601	4.19656020867037	21.2870728436764	2.34269839577316	0.00440933771337551	Up	0.000661400657006327	NA	GO:0046872//metal ion binding	GO:0030001//metal ion transport	K07213//copper chaperone;K10752//histone-binding protein RBBP4	gi|971574325|ref|XP_015170436.1|//PREDICTED: uncharacterized protein LOC102584462 [Solanum tuberosum]
Solyc03g118770.3.1	1880	62.1078036377638	7.76067192185125	-3.00052107763644	0.000270255281021521	Down	2.42802712971931e-05	NA	GO:0003677//DNA binding	GO:0006351//transcription, DNA-templated	K18490//homeobox protein OTX2;K09326	gi|460380106|ref|XP_004235799.1|//PREDICTED: WUSCHEL-related homeobox 1 isoform X1 [Solanum lycopersicum]
Solyc05g024200.2.1	1111	1.9725496446769	7.57481262012126	1.94114859063512	0.0447856272513431	Up	0.0112044686217626	NA	NA	NA	NA	gi|971578955|ref|XP_015158844.1|//PREDICTED: E3 ubiquitin-protein ligase MBR1-like [Solanum tuberosum]
Solyc04g081570.3.1	2955	40705.2010680895	16312.5817364397	-1.31922801472377	2.66789335187867e-08	Down	7.73869742023496e-10	GO:0044432//endoplasmic reticulum part	GO:0005515//protein binding;GO:0032559//adenyl ribonucleotide binding	GO:0044267//cellular protein metabolic process;GO:0050896//response to stimulus	K09487//heat shock protein 90kDa beta	gi|460385352|ref|XP_004238368.1|//PREDICTED: endoplasmin homolog [Solanum lycopersicum]
Solyc01g109920.2.1	1091	26.6238888922634	78.9381133247442	1.56800072033911	0.00272235899507921	Up	0.00037104858479258	NA	NA	GO:0009628//response to abiotic stimulus	NA	gi|460370182|ref|XP_004230933.1|//PREDICTED: embryogenic cell protein 40 [Solanum lycopersicum]
Solyc06g054240.3.1	1645	67.4002254779866	168.239166898145	1.31968828827137	8.89294407803352e-06	Up	4.88141663275053e-07	NA	NA	NA	K03787//5'-nucleotidase [EC:3.1.3.5]	gi|460390879|ref|XP_004241052.1|//PREDICTED: uncharacterized protein LOC101261528 isoform X1 [Solanum lycopersicum]
Solyc08g068320.3.1	5044	206.101177823826	98.3561008939082	-1.06726630080732	4.2232115755018e-05	Down	2.84407401059e-06	NA	NA	NA	K09420//myb proto-oncogene protein	gi|460399473|ref|XP_004245265.1|//PREDICTED: myb-related protein 3R-1-like [Solanum lycopersicum]
Solyc00g174340.2.1	744	18191.4241124999	90634.0855687517	2.31679523096687	1.31242521251323e-09	Up	2.90333342723017e-11	GO:0005576//extracellular region	NA	GO:0050832//defense response to fungus;GO:0006952//defense response;GO:0001906//cell killing;GO:0031640//killing of cells of other organism	K13449//pathogenesis-related protein 1	gi|350537861|ref|NP_001234314.1|//pathogenesis-related leaf protein 6 precursor [Solanum lycopersicum]
Solyc04g082910.1.1	264	2.10060890287614	131.798839003053	5.97138626958917	2.6690762688144e-22	Up	8.46024657096287e-25	NA	NA	NA	NA	gi|970021296|ref|XP_015071907.1|//PREDICTED: calvin cycle protein CP12-3, chloroplastic [Solanum pennellii]
Solyc09g057630.3.1	1836	1870.55251294655	506.070938240985	-1.88605293468527	6.30519802664717e-08	Down	1.98312473674832e-09	NA	GO:0043167//ion binding;GO:0016798//hydrolase activity, acting on glycosyl bonds	GO:0044238//primary metabolic process	K19892//glucan endo-1,3-beta-glucosidase 4 [EC:3.2.1.39];K19891//glucan endo-1,3-beta-glucosidase 1/2/3 [EC:3.2.1.39]	gi|460403105|ref|XP_004247041.1|//PREDICTED: probable glucan endo-1,3-beta-glucosidase A6 [Solanum lycopersicum]
Solyc02g092370.1.1	1524	95.4189117986505	25.1244475845885	-1.92518335739107	0.0135938472941431	Down	0.00254897422550824	NA	NA	NA	K14494//DELLA protein	gi|460372215|ref|XP_004231927.1|//PREDICTED: protein SHORT-ROOT [Solanum lycopersicum]
Solyc01g110130.3.1	3024	477.69132598425	193.306023755784	-1.30519208513332	0.0456113052506617	Down	0.011466318347815	NA	NA	NA	K02212//DNA replication licensing factor MCM4 [EC:3.6.4.12]	gi|460370042|ref|XP_004230864.1|//PREDICTED: DNA replication licensing factor MCM4 [Solanum lycopersicum]
Solyc12g099000.2.1	1478	7457.32960454546	20124.2919713397	1.43220701274525	2.5982425097162e-23	Up	7.52688763160825e-26	GO:0044424//intracellular part;GO:0005829//cytosol	GO:0016765//transferase activity, transferring alkyl or aryl (other than methyl) groups;GO:0043169//cation binding;GO:0046872//metal ion binding;GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0004478//methionine adenosyltransferase activity	GO:0006730//one-carbon metabolic process;GO:0044237//cellular metabolic process;GO:0006556//S-adenosylmethionine biosynthetic process	K00789//S-adenosylmethionine synthetase [EC:2.5.1.6]	gi|823683802|ref|NP_001296305.1|//S-adenosylmethionine synthase 2 [Solanum lycopersicum]
Solyc01g007010.2.1	1360	3421.72035603863	1476.56407488191	-1.21247789578355	5.10437021758381e-06	Down	2.57715004966045e-07	GO:0043234//protein complex	GO:0019787//ubiquitin-like protein transferase activity	GO:0032446//protein modification by small protein conjugation	K10260//F-box and WD-40 domain protein 7;K08332//vacuolar protein 8	gi|460365604|ref|XP_004228691.1|//PREDICTED: E3 ubiquitin-protein ligase PUB22-like [Solanum lycopersicum]
Solyc04g077740.1.1	1083	112.218186264731	30.0964165075793	-1.89864287559888	1.59252354786668e-06	Down	6.92382072748573e-08	NA	NA	NA	K14548//U3 small nucleolar RNA-associated protein 4	gi|460384774|ref|XP_004238084.1|//PREDICTED: uncharacterized protein LOC101256871 [Solanum lycopersicum]
Solyc04g057980.3.1	829	470.787266753081	1843.89101701854	1.96960618208939	3.54000174237818e-19	Up	1.82460586420546e-21	GO:0009579//thylakoid;GO:0009507//chloroplast	GO:0016491//oxidoreductase activity	NA	NA	gi|460383290|ref|XP_004237361.1|//PREDICTED: NAD(P)H-quinone oxidoreductase subunit M, chloroplastic [Solanum lycopersicum]
Solyc10g008320.1.1	627	93.7016409628869	39.2139148710133	-1.25670863484338	0.0336448752102215	Down	0.00778591525274915	NA	NA	NA	NA	gi|723734152|ref|XP_010327073.1|//PREDICTED: uncharacterized protein LOC104649465 [Solanum lycopersicum]
Solyc09g075500.3.1	1952	324.448333673963	147.385201480391	-1.138397081649	1.28656821240265e-05	Down	7.3718712847601e-07	NA	NA	NA	K06276//3-phosphoinositide dependent protein kinase-1 [EC:2.7.11.1];K18643//katanin p80 WD40 repeat-containing subunit B1	gi|723731253|ref|XP_010326567.1|//PREDICTED: uncharacterized protein LOC101263755 isoform X1 [Solanum lycopersicum];gi|460403832|ref|XP_004247390.1|//PREDICTED: AF4/FMR2 family member 4-like isoform X2 [Solanum lycopersicum]
Solyc04g024510.3.1	1089	239.036460679848	484.968046504994	1.02065900240514	4.97807253692943e-06	Up	2.50963777256788e-07	NA	NA	NA	NA	gi|565365939|ref|XP_006349655.1|//PREDICTED: CCR4-NOT transcription complex subunit 11 [Solanum tuberosum]
Solyc03g063720.3.1	2983	19.8813241752984	5.82682245747542	-1.77063259159377	0.0493312854657223	Down	0.0126866798814122	NA	NA	NA	NA	gi|723681676|ref|XP_010317919.1|//PREDICTED: uncharacterized protein LOC104646307 isoform X1 [Solanum lycopersicum]
Solyc01g091230.3.1	2451	148.867785589088	25.7292464419879	-2.53255048492784	0.00129986440786076	Down	0.000153655905549228	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460367898|ref|XP_004229807.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At1g34110 [Solanum lycopersicum]
Solyc08g014570.3.1	2675	2213.34735450005	1050.20689973399	-1.07555630095551	2.25281903584154e-06	Down	1.02046430366938e-07	NA	NA	NA	K15502//serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A;K06694//26S proteasome non-ATPase regulatory subunit 10	gi|460398454|ref|XP_004244774.1|//PREDICTED: ankyrin repeat-containing protein At5g02620 [Solanum lycopersicum]
Solyc01g079150.3.1	2561	638.862889995733	293.965360547171	-1.11986017450333	0.00340667428336417	Down	0.000488172760900763	GO:0031224//intrinsic component of membrane;GO:0005887//integral component of plasma membrane	GO:0015301//anion:anion antiporter activity;GO:0005452//inorganic anion exchanger activity	GO:0051453//regulation of intracellular pH;GO:0006811//ion transport;GO:0098656//anion transmembrane transport;GO:0015698//inorganic anion transport	K13855//solute carrier family 4 (anion exchanger), member 2;K13862//solute carrier family 4 (sodium borate transporter), member 11;K06573	gi|460367010|ref|XP_004229368.1|//PREDICTED: boron transporter 1 [Solanum lycopersicum];gi|731395807|ref|XP_010652294.1|//PREDICTED: probable boron transporter 2 [Vitis vinifera]
Solyc01g091360.3.1	2041	1969.94586790075	724.497489160572	-1.44310339138308	1.39684751126314e-08	Down	3.83868595289796e-10	NA	NA	NA	NA	gi|460367916|ref|XP_004229816.1|//PREDICTED: uncharacterized protein LOC101253424 [Solanum lycopersicum]
Solyc06g050440.3.1	1247	45.4892088494303	150.308169006739	1.72432717099846	2.70442136791419e-06	Up	1.25555153047634e-07	NA	NA	NA	K00430//peroxidase [EC:1.11.1.7]	gi|460390532|ref|XP_004240883.1|//PREDICTED: peroxidase P7-like [Solanum lycopersicum]
Solyc12g096120.2.1	1022	991.173710109068	2030.10604867785	1.03434526582495	6.82344066218048e-11	Up	1.17574711184299e-12	NA	NA	NA	K12162//ubiquitin-fold modifier 1	gi|460415474|ref|XP_004253083.1|//PREDICTED: ubiquitin-fold modifier 1 [Solanum lycopersicum]
Solyc09g075350.3.1	1796	91.0522447003382	21.8209403819451	-2.06098130772532	0.010401102080631	Down	0.00185404144687848	NA	NA	NA	K01051//pectinesterase [EC:3.1.1.11]	gi|460403852|ref|XP_004247400.1|//PREDICTED: pectinesterase-like [Solanum lycopersicum]
Solyc03g063160.1.1	1851	5.45900620661118	1.3560809788749	-2.00919500524369	0.0476173552281978	Down	0.0121246899994147	NA	NA	NA	K06066//CBF1 interacting corepressor	gi|460378248|ref|XP_004234885.1|//PREDICTED: putative pentatricopeptide repeat-containing protein At3g23330 [Solanum lycopersicum]
Solyc01g090440.2.1	3056	76.0602379009896	26.4277226284456	-1.52509034329819	0.0104560289290449	Down	0.00186619267266324	NA	NA	NA	NA	gi|460370622|ref|XP_004231150.1|//PREDICTED: uncharacterized protein LOC101250457 [Solanum lycopersicum]
Solyc11g071240.2.1	1324	33.3576931183768	4.86735824872821	-2.7768086520437	0.00317264935701073	Down	0.000446295558535106	NA	NA	NA	NA	gi|460411569|ref|XP_004251181.1|//PREDICTED: U-box domain-containing protein 26 [Solanum lycopersicum]
Solyc08g080190.3.1	2574	83.753400588642	185.721059416924	1.14891774203702	0.000233931094003241	Up	2.06119872895256e-05	NA	GO:0050662//coenzyme binding;GO:0016491//oxidoreductase activity	GO:0044281//small molecule metabolic process	K15403//fatty acid omega-hydroxy dehydrogenase [EC:1.1.-.-];K00108//choline dehydrogenase [EC:1.1.99.1]	gi|460400271|ref|XP_004245659.1|//PREDICTED: protein HOTHEAD [Solanum lycopersicum]
Solyc04g064710.3.1	2246	11.9083653978943	34.0657316640083	1.51634579809479	0.0214663082021139	Up	0.00446932090257706	GO:0044424//intracellular part	GO:0016616//oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;GO:0046914//transition metal ion binding	GO:0008152//metabolic process	K18857//alcohol dehydrogenase class-P [EC:1.1.1.1]	gi|460384054|ref|XP_004237730.1|//PREDICTED: alcohol dehydrogenase 1 [Solanum lycopersicum]
Solyc04g014810.3.1	2391	500.399874926014	175.398047739484	-1.51244873888876	0.00016920143180767	Down	1.41574109985049e-05	NA	GO:0003824//catalytic activity	NA	K08332//vacuolar protein 8	gi|460381874|ref|XP_004236666.1|//PREDICTED: U-box domain-containing protein 4-like [Solanum lycopersicum]
Solyc03g044330.1.1	1980	1885.2006407697	805.544277493997	-1.22668228152532	6.92323872381884e-05	Down	5.02442720024324e-06	GO:0009536//plastid	GO:0046872//metal ion binding;GO:0019842//vitamin binding;GO:0050662//coenzyme binding;GO:0016744//transferase activity, transferring aldehyde or ketonic groups	GO:0008652//cellular amino acid biosynthetic process;GO:0006950//response to stress	K01652//acetolactate synthase I/II/III large subunit [EC:2.2.1.6]	gi|460377776|ref|XP_004234664.1|//PREDICTED: acetolactate synthase 2, chloroplastic [Solanum lycopersicum]
Solyc04g015220.3.1	2876	34.0366970181977	9.46131944455069	-1.8469777458939	0.00194480980668514	Down	0.000248040076924854	NA	NA	NA	K13453;K13457//disease resistance protein RPM1	gi|723689026|ref|XP_010319214.1|//PREDICTED: putative late blight resistance protein homolog R1B-16 [Solanum lycopersicum]
Solyc01g090925.1.1	582	31.9202641302013	107.625334940931	1.75347323286954	0.0452679168856007	Up	0.0113527439412872	NA	NA	NA	NA	gi|460367858|ref|XP_004229787.1|//PREDICTED: uncharacterized protein LOC101244710 [Solanum lycopersicum]
Solyc01g103980.3.1	1880	350.010596500955	173.621709552969	-1.01145124725123	0.00032001282189361	Down	2.95813206693981e-05	NA	NA	NA	K15707//RING finger protein 170 [EC:2.3.2.27]	gi|460369256|ref|XP_004230479.1|//PREDICTED: E3 ubiquitin-protein ligase RNF170-like isoform X1 [Solanum lycopersicum];gi|565365317|ref|XP_006349361.1|//PREDICTED: uncharacterized protein LOC102602273 isoform X1 [Solanum tuberosum]
Solyc08g079317.1.1	4185	2.73538426041115	18.7299063926758	2.77552827056821	0.00169425872948368	Up	0.000209646988761168	NA	NA	NA	K13083//flavonoid 3',5'-hydroxylase [EC:1.14.13.88];K20770;K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30]	gi|565378149|ref|XP_006355524.1|//PREDICTED: geraniol 8-hydroxylase-like [Solanum tuberosum];gi|723724833|ref|XP_010325460.1|//PREDICTED: geraniol 8-hydroxylase-like isoform X1 [Solanum lycopersicum]
Solyc02g084610.1.1	1248	69.8793208643983	24.2102168337733	-1.52924958662107	0.02886339848586	Down	0.00641119280137386	NA	NA	NA	K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|460373293|ref|XP_004232455.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g36180 [Solanum lycopersicum]
Solyc09g075400.3.1	1579	36.7179805182861	13.4056924808597	-1.45364096827604	0.0380075323144748	Down	0.00908291366672475	NA	NA	NA	NA	gi|460404124|ref|XP_004247534.1|//PREDICTED: DNA ligase 1-like isoform X2 [Solanum lycopersicum]
Solyc09g066100.3.1	1254	2379.58965055363	681.488640569048	-1.80395129406128	0.000482949080106988	Down	4.7877006248379e-05	NA	NA	NA	K11275//histone H1/5	gi|823683796|ref|NP_001296308.1|//histone H1 [Solanum lycopersicum]
Solyc01g081297.1.1	1860	525.735165034919	236.998844502617	-1.14945621097028	0.000265374062811079	Down	2.37746912249835e-05	NA	GO:0000166//nucleotide binding;GO:0004672//protein kinase activity	NA	K13412//calcium-dependent protein kinase [EC:2.7.11.1];K04515//calcium/calmodulin-dependent protein kinase (CaM kinase) II [EC:2.7.11.17]	gi|460367451|ref|XP_004229587.1|//PREDICTED: serine/threonine-protein kinase PEPKR2 [Solanum lycopersicum]
Solyc04g074490.3.1	3286	5422.51615772494	11409.5729562655	1.07321044277589	1.13286089348527e-07	Up	3.75489257772959e-09	NA	NA	NA	K11323//histone arginine demethylase JMJD6 [EC:1.14.11.-]	gi|460384472|ref|XP_004237935.1|//PREDICTED: F-box protein At1g78280 [Solanum lycopersicum]
Solyc03g121190.3.1	511	256.676420839601	108.530369631755	-1.2418519682625	1.00907721365523e-05	Down	5.61863911290344e-07	GO:0044464//cell part	NA	NA	NA	gi|566161095|ref|XP_006385495.1|//hypothetical protein POPTR_0003s05980g [Populus trichocarpa]
Solyc01g098805.1.1	6663	206.003383996737	77.4372781089069	-1.41156788817828	0.00780537508521137	Down	0.00131381670922632	NA	NA	NA	K13754//solute carrier family 24 (sodium/potassium/calcium exchanger), member 6	gi|460368650|ref|XP_004230178.1|//PREDICTED: cation/calcium exchanger 5 [Solanum lycopersicum];gi|460370857|ref|XP_004231265.1|//PREDICTED: uncharacterized protein LOC101262870 [Solanum lycopersicum]
Solyc12g006040.2.1	3336	42.3822767988083	87.1815411471455	1.04056161493469	0.0124181265171908	Up	0.00228553329278018	NA	NA	NA	K13453;K13457//disease resistance protein RPM1	gi|460412287|ref|XP_004251533.1|//PREDICTED: putative late blight resistance protein homolog R1B-14 [Solanum lycopersicum]
Solyc12g005300.2.1	1581	2175.18168250524	635.206684491822	-1.77583790776477	1.10615471368042e-05	Down	6.21327685299045e-07	NA	NA	NA	K08099//chlorophyllase [EC:3.1.1.14]	gi|460412186|ref|XP_004251483.1|//PREDICTED: chlorophyllase-2, chloroplastic-like [Solanum lycopersicum]
Solyc12g089195.1.1	1485	25.9786073715758	55.967498325289	1.10726516789219	0.034081551339082	Up	0.00791517744229321	NA	NA	NA	K12735//peptidyl-prolyl cis-trans isomerase-like 4 [EC:5.2.1.8]	gi|970065683|ref|XP_015059802.1|//PREDICTED: peptidyl-prolyl cis-trans isomerase CYP59-like [Solanum pennellii]
Solyc06g074670.3.1	2032	5393.07626244686	10852.868916245	1.00889612427208	1.51058050897391e-05	Up	8.84866009207066e-07	NA	GO:0048037//cofactor binding	GO:0008152//metabolic process	K12449//UDP-apiose/xylose synthase	gi|460391381|ref|XP_004241299.1|//PREDICTED: UDP-D-apiose/UDP-D-xylose synthase 2-like [Solanum lycopersicum]
Solyc04g082565.1.1	8277	1821.69923173384	800.432467073816	-1.18643319330049	7.69703983930204e-09	Down	2.02416510446656e-10	NA	GO:0004842//ubiquitin-protein transferase activity;GO:0016874//ligase activity	GO:0016567//protein ubiquitination	K12616//enhancer of mRNA-decapping protein 4;K08332//vacuolar protein 8	gi|661888836|emb|CDP07279.1|//unnamed protein product [Coffea canephora];gi|460385497|ref|XP_004238440.1|//PREDICTED: uncharacterized protein At5g43822 [Solanum lycopersicum]
Solyc06g066460.3.1	810	65.6757506172246	1.86118949861024	-5.14106392698904	4.98923502329125e-11	Down	8.40924488500556e-13	NA	NA	NA	K14376//poly(A) polymerase [EC:2.7.7.19]	gi|970035976|ref|XP_015079326.1|//PREDICTED: nuclear poly(A) polymerase 4-like isoform X1 [Solanum pennellii]
Solyc03g006320.1.1	651	78.0945464102494	36.2702151418281	-1.10643650103658	0.0385286677965554	Down	0.00923590564065462	NA	NA	GO:0006351//transcription, DNA-templated	K09286//EREBP-like factor	gi|460376648|ref|XP_004234109.1|//PREDICTED: ethylene-responsive transcription factor 4-like [Solanum lycopersicum]
Solyc03g112750.3.1	5779	146.926708694743	73.0814693320387	-1.00751913102228	0.0425115305235827	Down	0.010435956985191	GO:0005622//intracellular	GO:0005525//GTP binding	GO:0007264//small GTPase mediated signal transduction	K14319//Ran GTPase-activating protein 1	gi|726965316|ref|NP_001289839.1|//protein TORNADO 1 [Solanum lycopersicum]
Solyc01g066980.3.1	630	273.131557875583	67.3591254956587	-2.01965070052799	2.40749089659447e-10	Down	4.72802952604332e-12	NA	NA	NA	K14416//elongation factor 1 alpha-like protein	gi|460366726|ref|XP_004229230.1|//PREDICTED: flowering-promoting factor 1-like protein 3 [Solanum lycopersicum]
Solyc07g032640.2.1	1150	2476.33298983383	5535.69286993875	1.16055857666749	0.0205620123811869	Up	0.00423748159436597	GO:0009523//photosystem II;GO:0009534//chloroplast thylakoid	GO:0046872//metal ion binding	GO:0042548//regulation of photosynthesis, light reaction	K02716//photosystem II oxygen-evolving enhancer protein 1	gi|460372520|ref|XP_004232077.1|//PREDICTED: oxygen-evolving enhancer protein 1, chloroplastic [Solanum lycopersicum]
Solyc11g066160.1.1	312	317.472362586771	94.7275301102671	-1.74477533038504	0.0173691686692944	Down	0.00345030890044673	NA	NA	NA	K11254//histone H4	gi|976922550|gb|KVI06931.1|//Histone core [Cynara cardunculus var. scolymus]
Solyc01g100980.3.1	1769	39.3180032097252	10.2042519652942	-1.94601962754818	0.00619762580100472	Down	0.000995852040687447	GO:0005576//extracellular region	GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds;GO:0004650//polygalacturonase activity	GO:0044238//primary metabolic process;GO:0005975//carbohydrate metabolic process;GO:0045229//external encapsulating structure organization;GO:0071555//cell wall organization	K01213//galacturan 1,4-alpha-galacturonidase [EC:3.2.1.67]	gi|565355889|ref|XP_006344808.1|//PREDICTED: polygalacturonase At1g48100-like isoform X1 [Solanum tuberosum];gi|723663312|ref|XP_010313757.1|//PREDICTED: polygalacturonase At1g48100 isoform X1 [Solanum lycopersicum]
Solyc04g079660.2.1	1949	1229.69255409155	431.294250290596	-1.51155327184862	2.23794969927563e-05	Down	1.3926142974424e-06	NA	NA	NA	K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30]	gi|460385013|ref|XP_004238200.1|//PREDICTED: cytochrome P450 CYP82D47-like [Solanum lycopersicum]
Solyc04g054260.3.1	1738	435.044348968101	189.130016220473	-1.2017841316268	9.89683790718211e-05	Down	7.56597992001281e-06	NA	NA	NA	K20562	gi|460383448|ref|XP_004237435.1|//PREDICTED: cytochrome P450 CYP736A12-like [Solanum lycopersicum]
Solyc11g050770.1.1	246	253.807390827182	536.816500011194	1.08069493520114	7.57989077773227e-05	Up	5.57797831499034e-06	GO:0009523//photosystem II;GO:0009507//chloroplast	NA	GO:0015979//photosynthesis	K02724//photosystem II PsbZ protein	gi|527209871|gb|EPS74483.1|//hypothetical protein M569_00272, partial [Genlisea aurea]
Solyc04g073940.3.1	2491	66.2190254693846	26.0467898234376	-1.34614020277347	0.0388196481905129	Down	0.00932518636931622	NA	NA	NA	K09527//DnaJ homolog subfamily C member 7	gi|460385661|ref|XP_004238521.1|//PREDICTED: inactive TPR repeat-containing thioredoxin TTL3-like [Solanum lycopersicum]
Solyc05g013690.3.1	1473	85.4304802811459	23.6600036181165	-1.85230059879225	0.0351972908075036	Down	0.00825507565440096	NA	GO:0016787//hydrolase activity	GO:0044238//primary metabolic process	K01206//alpha-L-fucosidase [EC:3.2.1.51]	gi|460386915|ref|XP_004239139.1|//PREDICTED: GDSL esterase/lipase At3g26430-like [Solanum lycopersicum]
Solyc02g082290.3.1	4494	65.2477574243495	32.4507208123011	-1.00767779240644	0.0471531463684129	Down	0.0119603654182031	NA	NA	NA	NA	gi|723673338|ref|XP_010316493.1|//PREDICTED: MORC family CW-type zinc finger protein 2-like [Solanum lycopersicum]
Solyc08g007000.3.1	3257	62.4263148682097	27.6972577412625	-1.17241115901596	0.0336740549210653	Down	0.00780002924798174	NA	NA	NA	K01102//pyruvate dehydrogenase phosphatase [EC:3.1.3.43]	gi|460398304|ref|XP_004244702.1|//PREDICTED: protein phosphatase 2C 29 [Solanum lycopersicum]
Solyc01g100010.3.1	2602	4688.27530589858	2328.22293727272	-1.00982808143066	7.76931182832127e-15	Down	6.54750131506382e-17	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K16219//protein N-terminal methyltransferase [EC:2.1.1.244];K17600//vacuolar protein sorting-associated protein 54;K08235//xyloglucan:xyloglucosyl transferase [EC:2.4.1.207]	gi|460368829|ref|XP_004230267.1|//PREDICTED: F-box protein PP2-B15-like [Solanum lycopersicum]
Solyc11g040120.2.1	3168	657.086955572071	229.466381282901	-1.51780149976257	0.00256319539525802	Down	0.000345207255356131	GO:0043231//intracellular membrane-bounded organelle	GO:0032559//adenyl ribonucleotide binding;GO:0003676//nucleic acid binding	GO:0006259//DNA metabolic process	K02540//DNA replication licensing factor MCM2 [EC:3.6.4.12]	gi|970062936|ref|XP_015058380.1|//PREDICTED: DNA replication licensing factor MCM2 [Solanum pennellii]
Solyc06g053980.3.1	1067	300.60835491948	911.133088762598	1.59977669600572	2.80971300442619e-12	Up	3.78433880957327e-14	NA	NA	NA	K08099//chlorophyllase [EC:3.1.1.14]	gi|460390857|ref|XP_004241041.1|//PREDICTED: chlorophyllase-2, chloroplastic-like [Solanum lycopersicum]
Solyc02g084440.3.1	1440	12484.4085299454	36412.4532838878	1.5443044726736	5.29928838725192e-21	Up	2.1532097284545e-23	GO:0009536//plastid	GO:0016829//lyase activity;GO:0016832//aldehyde-lyase activity	GO:0006007//glucose catabolic process	K01623//fructose-bisphosphate aldolase, class I [EC:4.1.2.13]	gi|629098295|gb|KCW64060.1|//hypothetical protein EUGRSUZ_G01726 [Eucalyptus grandis];gi|808175957|ref|NP_001294934.1|//fructose-bisphosphate aldolase 1, chloroplastic [Solanum lycopersicum]
Solyc03g026020.3.1	1633	2034.92073179793	807.917155197368	-1.33269332693557	1.35547159754476e-19	Down	6.73146165823583e-22	NA	NA	NA	K09419//heat shock transcription factor, other eukaryote	gi|460377177|ref|XP_004234371.1|//PREDICTED: heat stress transcription factor B-2a [Solanum lycopersicum]
Solyc04g076730.1.1	228	104.241244885183	21.3352372574548	-2.28861615912727	2.51781285210793e-08	Down	7.26547199987504e-10	NA	NA	NA	NA	gi|147795803|emb|CAN69783.1|//hypothetical protein VITISV_012616 [Vitis vinifera]
Solyc11g068790.2.1	987	296.168464870262	920.022784643567	1.63525155542877	1.50155927028727e-17	Up	9.49066807405043e-20	NA	NA	NA	K20815	gi|460411372|ref|XP_004251086.1|//PREDICTED: uncharacterized protein LOC101243761 [Solanum lycopersicum]
Solyc03g119700.3.1	710	441.154163099604	976.583320646814	1.14646023848647	5.50181083482946e-06	Up	2.80058316761635e-07	NA	NA	GO:0009057//macromolecule catabolic process	K06891//ATP-dependent Clp protease adaptor protein ClpS	gi|565349290|ref|XP_006341627.1|//PREDICTED: ATP-dependent Clp protease adapter protein CLPS1, chloroplastic [Solanum tuberosum]
Solyc11g011450.2.1	781	12.6959534148267	29.3190692982227	1.20747056779835	0.0434422582922277	Up	0.0107543288022144	NA	NA	NA	NA	gi|460409548|ref|XP_004250200.1|//PREDICTED: centromere protein V [Solanum lycopersicum]
Solyc02g067800.3.1	1958	1183.55406106218	584.363281829179	-1.01818817030257	0.00171134060119923	Down	0.000212082616266	NA	NA	NA	K13944	gi|460375060|ref|XP_004233326.1|//PREDICTED: LOB domain-containing protein 25 [Solanum lycopersicum]
Solyc02g068070.3.1	1691	131.439377760831	22.7400920495647	-2.53108755640544	0.00108175150424386	Down	0.000123151995930847	NA	NA	NA	K01052//lysosomal acid lipase/cholesteryl ester hydrolase [EC:3.1.1.13]	gi|971568131|ref|XP_006357189.2|//PREDICTED: triacylglycerol lipase 2-like [Solanum tuberosum];gi|460375010|ref|XP_004233301.1|//PREDICTED: triacylglycerol lipase 2-like [Solanum lycopersicum]
Solyc12g044330.2.1	1138	743.306742359476	138.153243224048	-2.4276882638062	0.0109557186338134	Down	0.00196815487119861	GO:0031224//intrinsic component of membrane	NA	GO:0006810//transport	K09873//aquaporin TIP	gi|970068735|ref|XP_015061505.1|//PREDICTED: aquaporin TIP2-1-like [Solanum pennellii]
Solyc03g031430.1.1	729	87.7631276028362	356.515973219224	2.02227987123034	1.24225188661039e-11	Up	1.8741271878509e-13	NA	GO:0046914//transition metal ion binding	GO:0008152//metabolic process	K03188//urease accessory protein	gi|350535509|ref|NP_001233942.1|//ureF protein [Solanum lycopersicum]
Solyc07g063170.1.1	507	160.576890703466	60.8913612590517	-1.39895481283794	1.09423190268561e-05	Down	6.13807286269468e-07	NA	NA	NA	NA	gi|460397346|ref|XP_004244228.1|//PREDICTED: PH domain-containing protein YHR131C-like [Solanum lycopersicum]
Solyc05g008980.2.1	2030	300.576374763075	1118.75665527772	1.89609274141975	2.769722996752e-10	Up	5.47540294062047e-12	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460387488|ref|XP_004239409.1|//PREDICTED: probable serine/threonine-protein kinase At1g18390 [Solanum lycopersicum]
Solyc06g007930.3.1	1259	5751.16591622667	2808.38328591433	-1.03411461189765	1.27886095003496e-08	Down	3.49305135336863e-10	NA	GO:0060089//molecular transducer activity	GO:0009314//response to radiation;GO:0023052//signaling	K10534//nitrate reductase (NAD(P)H) [EC:1.7.1.1 1.7.1.2 1.7.1.3]	gi|460390000|ref|XP_004240632.1|//PREDICTED: BTB/POZ domain-containing protein At5g48800-like [Solanum lycopersicum];gi|460389642|ref|XP_004240459.1|//PREDICTED: cytochrome b5-like [Solanum lycopersicum]
Solyc06g072160.3.1	1410	736.359975807514	365.584768518816	-1.01020524825194	3.7231352881527e-06	Down	1.79713415150486e-07	NA	GO:0046914//transition metal ion binding;GO:0003824//catalytic activity	GO:0008152//metabolic process	K00001//alcohol dehydrogenase [EC:1.1.1.1]	gi|460391750|ref|XP_004241482.1|//PREDICTED: alcohol dehydrogenase-like 6 [Solanum lycopersicum]
Solyc02g089495.1.1	3602	765.489922353192	1679.08348189713	1.13321867108704	0.0140691348155716	Up	0.00265609174208194	GO:0044464//cell part	GO:0046914//transition metal ion binding	NA	K12135//zinc finger protein CONSTANS	gi|45544885|gb|AAS67378.1|//CONSTANS 2 [Solanum lycopersicum]
Solyc01g094330.3.1	3923	885.715407142953	230.027253385557	-1.94503841468843	9.75707175005463e-12	Down	1.43267798829134e-13	NA	NA	NA	NA	gi|971536695|ref|XP_006339537.2|//PREDICTED: uncharacterized protein LOC102583787 isoform X1 [Solanum tuberosum];gi|723660968|ref|XP_010326218.1|//PREDICTED: uncharacterized protein LOC101260881 [Solanum lycopersicum]
Solyc01g073660.3.1	3070	3218.70273166784	1515.4592649923	-1.0867242670957	1.899730329265e-05	Down	1.14212530705999e-06	GO:0016021//integral component of membrane	NA	NA	NA	gi|460366940|ref|XP_004229333.1|//PREDICTED: major facilitator superfamily domain-containing protein 12 [Solanum lycopersicum];gi|697133636|ref|XP_009620863.1|//PREDICTED: major facilitator superfamily domain-containing protein 12-like isoform X1 [Nicotiana tomentosiformis]
Solyc12g043120.2.1	3154	5206.26793106518	2349.56505139622	-1.14785584774788	6.07288747504517e-13	Down	7.35692162138655e-15	NA	GO:0032559//adenyl ribonucleotide binding;GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	GO:0008152//metabolic process;GO:0050896//response to stimulus	K09489//heat shock 70kDa protein 4	gi|460413941|ref|XP_004252333.1|//PREDICTED: heat shock 70 kDa protein 15-like [Solanum lycopersicum]
Solyc03g114360.3.1	2255	1347.41501679221	4333.94137924143	1.68548535650952	0.000132076795156566	Up	1.05820119287519e-05	NA	NA	NA	NA	gi|460380723|ref|XP_004236104.1|//PREDICTED: probable inactive poly [ADP-ribose] polymerase SRO5 isoform X2 [Solanum lycopersicum]
Solyc09g011830.3.1	2505	273.342382703352	586.861236352714	1.10231024548452	0.000125019659592682	Up	9.91502793157911e-06	NA	NA	NA	K11292//transcription elongation factor SPT6;K18577//mannosylglycoprotein endo-beta-mannosidase [EC:3.2.1.152]	gi|460401718|ref|XP_004246364.1|//PREDICTED: uncharacterized protein LOC101260563 [Solanum lycopersicum]
Solyc08g016070.2.1	6083	165.974635318993	81.6808244996273	-1.02289344775864	0.00224308796725857	Down	0.000293677431379226	NA	GO:0032561//guanyl ribonucleotide binding;GO:0019899//enzyme binding;GO:0030695//GTPase regulator activity	NA	NA	gi|723720766|ref|XP_010324735.1|//PREDICTED: dedicator of cytokinesis protein 7 [Solanum lycopersicum]
BGI_novel_G000474	1029	13820.2106636086	3000.07889979143	-2.20370725900329	8.5043557831575e-45	Down	5.43920422549577e-48	NA	NA	NA	NA	gi|723746607|ref|XP_010313549.1|//PREDICTED: zinc finger protein ZAT11-like [Solanum lycopersicum]
BGI_novel_G000214	3495	97.7537336008001	279.024034894818	1.51316568913896	0.000909978111979581	Up	0.000100583735628142	NA	NA	NA	NA	gi|565353569|ref|XP_006343702.1|//PREDICTED: uncharacterized protein LOC102605937 [Solanum tuberosum]
BGI_novel_G000227	3915	53.401470847131	23.5988069521696	-1.17816555352836	0.0367746624117361	Down	0.00871219146752077	NA	NA	NA	NA	NA
Solyc03g097930.3.1	763	142.390377884117	67.3424703482992	-1.08026310845334	0.0217454620830683	Down	0.00454311973936239	NA	NA	NA	NA	gi|460379061|ref|XP_004235283.1|//PREDICTED: potassium channel SKOR-like [Solanum lycopersicum]
Solyc02g068600.3.1	1805	195.767869104657	49.984414649455	-1.96959376666867	0.000129404109758117	Down	1.03406444366531e-05	GO:0016020//membrane	NA	NA	K15502//serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A	gi|723676466|ref|XP_004233910.2|//PREDICTED: uncharacterized protein LOC101247887 [Solanum lycopersicum]
Solyc06g059860.3.1	1230	1223.99075556653	433.280667301015	-1.49821889077795	1.75790655718311e-06	Down	7.75780433248981e-08	NA	NA	NA	NA	gi|460392908|ref|XP_004242054.1|//PREDICTED: hybrid signal transduction histidine kinase K [Solanum lycopersicum]
BGI_novel_G000246	1079	13.198325961629	3.01787353149659	-2.12875069987429	0.0337063853597855	Down	0.00780902637492699	NA	NA	NA	NA	gi|971579818|ref|XP_015159068.1|//PREDICTED: uncharacterized protein LOC107058181 [Solanum tuberosum]
Solyc01g104910.3.1	2887	679.141279349907	252.006466031466	-1.43025097326636	1.3632544165867e-06	Down	5.85717285079763e-08	NA	NA	NA	NA	gi|460369408|ref|XP_004230554.1|//PREDICTED: uncharacterized protein LOC101246968 [Solanum lycopersicum]
Solyc02g070220.3.1	1558	152.864823033913	339.483475682595	1.1510848985541	4.86727520237343e-08	Up	1.49424250005144e-09	NA	GO:0043139//5'-3' DNA helicase activity;GO:0003697//single-stranded DNA binding	GO:0032508//DNA duplex unwinding	K17680//twinkle protein [EC:3.6.4.12]	gi|970012253|ref|XP_015067070.1|//PREDICTED: primase homolog protein isoform X3 [Solanum pennellii];gi|723675899|ref|XP_010316946.1|//PREDICTED: primase homolog protein [Solanum lycopersicum]
Solyc09g075120.3.1	1768	17152.1302715126	8269.75941721136	-1.05247050389075	6.24077773546945e-11	Down	1.07065261376e-12	NA	NA	NA	K08678//UDP-glucuronate decarboxylase [EC:4.1.1.35]	gi|460403888|ref|XP_004247418.1|//PREDICTED: UDP-glucuronic acid decarboxylase 2 [Solanum lycopersicum]
Solyc03g006030.3.1	4217	293.437373383541	746.055400142499	1.34623013500465	0.00166366406589173	Up	0.000205047534983495	NA	NA	NA	K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|723678757|ref|XP_010317425.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At3g47570 [Solanum lycopersicum];gi|970015008|ref|XP_015068512.1|//PREDICTED: putative receptor-like protein kinase At3g47110 isoform X2 [Solanum pennellii]
Solyc02g071920.3.1	1304	1132.59775480004	439.896926795227	-1.364398147571	3.39752514615689e-08	Down	1.00724221789753e-09	GO:0031224//intrinsic component of membrane	NA	GO:0006810//transport	K09874//aquaporin NIP	gi|567757540|ref|NP_001274704.1|//aquaporin NIP1-1-like [Solanum lycopersicum]
Solyc11g018500.2.1	5794	21.4891230634633	4.16333840663948	-2.36779387565746	0.00864387742223305	Down	0.00148357294207025	NA	NA	NA	K12309//beta-galactosidase [EC:3.2.1.23]	gi|970063665|ref|XP_015058773.1|//PREDICTED: beta-galactosidase 16-like isoform X1 [Solanum pennellii]
Solyc02g087740.3.1	1728	887.643864966232	267.536166084978	-1.73024703223798	0.00065078298348752	Down	6.78128442532344e-05	NA	NA	NA	K10712//cysteamine dioxygenase [EC:1.13.11.19]	gi|460372852|ref|XP_004232237.1|//PREDICTED: 2-aminoethanethiol dioxygenase [Solanum lycopersicum]
Solyc11g010420.2.1	795	162.906099354778	80.7672023685104	-1.0121991476955	0.00666834991126415	Down	0.0010888125889724	NA	NA	NA	K02183//calmodulin	gi|460409413|ref|XP_004250133.1|//PREDICTED: UPF0483 protein AGAP003155-like [Solanum lycopersicum]
Solyc05g013410.3.1	1629	1279.97495415068	2716.0119270644	1.08537423439687	1.12627415244714e-05	Up	6.35594894157529e-07	NA	NA	NA	K14026//SEL1 protein	gi|460386880|ref|XP_004239122.1|//PREDICTED: F-box protein At1g70590-like [Solanum lycopersicum]
Solyc09g090550.3.1	3798	73.7242003211325	31.1229260739401	-1.24416056451879	0.0395054114486611	Down	0.00954788493821991	NA	NA	NA	K05758//actin related protein 2/3 complex, subunit 2	gi|723732587|ref|XP_010326787.1|//PREDICTED: actin-related protein 2/3 complex subunit 2B isoform X4 [Solanum lycopersicum]
Solyc04g077540.3.1	2922	79.2083014517688	22.3121178614286	-1.8278241799667	0.0423822364451977	Down	0.0104007780857385	GO:0005874//microtubule	GO:0005524//ATP binding;GO:0003777//microtubule motor activity;GO:0008017//microtubule binding	GO:0007018//microtubule-based movement	K11498//centromeric protein E	gi|460384742|ref|XP_004238068.1|//PREDICTED: kinesin-related protein 11 [Solanum lycopersicum]
Solyc08g006280.2.1	3305	98.509417257746	11.1513190947198	-3.14304727194854	0.000609760924367736	Down	6.28572209468621e-05	NA	NA	NA	K19519//transforming growth factor-beta-induced protein	gi|723719589|ref|XP_010324533.1|//PREDICTED: uncharacterized protein LOC104648601 [Solanum lycopersicum]
Solyc10g083690.3.1	1516	8506.38296303785	905.876744841414	-3.23115913436778	3.26197723239793e-22	Down	1.06769006478036e-24	NA	GO:0005506//iron ion binding;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K20618	gi|460408052|ref|XP_004249462.1|//PREDICTED: cytochrome P450 76A2-like [Solanum lycopersicum]
Solyc07g018200.1.1	960	66.1696424740122	21.3523831767558	-1.63177238390164	0.00479835630457821	Down	0.000732570725507087	GO:0031224//intrinsic component of membrane;GO:0043231//intracellular membrane-bounded organelle	GO:0016758//transferase activity, transferring hexosyl groups	GO:0006464//cellular protein modification process	K20843;K14753//guanine nucleotide-binding protein subunit beta-2-like 1 protein;K00734//galactosylxylosylprotein 3-beta-galactosyltransferase [EC:2.4.1.134]	gi|723713515|ref|XP_004242922.2|//PREDICTED: probable beta-1,3-galactosyltransferase 20 [Solanum lycopersicum]
Solyc02g082150.1.1	1050	94.0105728239892	44.6286401390462	-1.07485316996847	0.0311112869549546	Down	0.00703801642430496	NA	NA	NA	NA	gi|723673391|ref|XP_010316504.1|//PREDICTED: uncharacterized protein LOC104645781 [Solanum lycopersicum]
BGI_novel_G000453	1080	3.20585408073584	16.053778155814	2.32413220085191	0.0189152422614472	Up	0.00382503488168843	NA	NA	NA	K15502//serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A	gi|971582366|ref|XP_015159747.1|//PREDICTED: ankyrin repeat-containing protein At3g12360-like [Solanum tuberosum]
Solyc09g074520.3.1	2326	669.288657123743	205.867227748947	-1.70091438031259	0.00160257734264328	Down	0.000196493587647646	NA	GO:0043178//alcohol binding	GO:0009755//hormone-mediated signaling pathway	K14485//transport inhibitor response 1	gi|350534820|ref|NP_001234673.1|//TIR1-like protein [Solanum lycopersicum]
Solyc01g067750.3.1	2268	3586.40571459353	1160.01341625037	-1.62839721221713	2.54010709735233e-12	Down	3.3714645619975e-14	GO:0044424//intracellular part	GO:0003855//3-dehydroquinate dehydratase activity;GO:0016616//oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;GO:0016836//hydro-lyase activity;GO:0000166//nucleotide binding;GO:0004764//shikimate 3-dehydrogenase (NADP+) activity	GO:0008652//cellular amino acid biosynthetic process;GO:0055114//oxidation-reduction process	K13832//3-dehydroquinate dehydratase / shikimate dehydrogenase [EC:4.2.1.10 1.1.1.25]	gi|350537731|ref|NP_001234051.1|//dehydroquinate dehydratase/shikimate:NADP oxidoreductase isoform 1 [Solanum lycopersicum];gi|568215405|ref|NP_001275335.1|//dehydroquinate dehydratase [Solanum tuberosum]
Solyc06g076040.3.1	3077	1382.94241997983	4152.20540840053	1.58613672530161	8.35548161312603e-21	Up	3.48930947726482e-23	GO:0043234//protein complex	GO:0019787//ubiquitin-like protein transferase activity	GO:0032446//protein modification by small protein conjugation	K08332//vacuolar protein 8	gi|723707195|ref|XP_010322360.1|//PREDICTED: U-box domain-containing protein 13 isoform X2 [Solanum lycopersicum];gi|460391244|ref|XP_004241233.1|//PREDICTED: U-box domain-containing protein 13 isoform X1 [Solanum lycopersicum]
Solyc04g081700.3.1	708	8.73456497025875	164.218714141292	4.23273888310039	3.01167311738484e-21	Up	1.13305986357594e-23	NA	NA	NA	NA	NA
Solyc08g083270.2.1	1360	51.3621786331846	10.0706366776474	-2.3505515035292	0.0133408226647755	Down	0.00249098957431455	GO:0005623//cell	GO:0015035//protein disulfide oxidoreductase activity;GO:0009055//electron carrier activity	GO:0055114//oxidation-reduction process;GO:0045454//cell redox homeostasis	K17479//glutaredoxin domain-containing cysteine-rich protein 1	gi|525313985|ref|NP_001265925.1|//Hop-interacting protein THI143 [Solanum lycopersicum]
Solyc10g081570.2.1	1551	195850.560789959	457588.182397461	1.22429653453087	0.000659412207081007	Up	6.89182509883761e-05	NA	NA	NA	K17046//protein DEK;K11984//U4/U6.U5 tri-snRNP-associated protein 1	gi|970054891|ref|XP_015089091.1|//PREDICTED: ABC transporter F family member 4-like isoform X2 [Solanum pennellii];gi|460407884|ref|XP_004249379.1|//PREDICTED: ABC transporter F family member 4-like [Solanum lycopersicum]
Solyc05g053360.3.1	1376	421.038125795029	954.559436344339	1.18088415293315	3.84141041960004e-10	Up	7.76086303734094e-12	GO:0016020//membrane	NA	NA	NA	gi|460388452|ref|XP_004239881.1|//PREDICTED: uncharacterized protein LOC101265439 isoform X1 [Solanum lycopersicum]
Solyc09g082690.3.1	8961	74.2942579226922	150.838663199154	1.02168365309908	0.0235740567210014	Up	0.00500660459706745	NA	NA	NA	NA	gi|460404259|ref|XP_004247601.1|//PREDICTED: dymeclin [Solanum lycopersicum]
Solyc01g090180.3.1	819	121.890698857704	21.1351794964956	-2.52786977205808	2.47385424082412e-06	Down	1.12989429960891e-07	NA	NA	NA	K15777//4,5-DOPA dioxygenase extradiol [EC:1.13.11.-]	gi|460367764|ref|XP_004229740.1|//PREDICTED: 4,5-DOPA dioxygenase extradiol-like [Solanum lycopersicum]
Solyc12g042600.2.1	2043	9432.96399112454	4227.84809654826	-1.15778761775835	0.000540357153006955	Down	5.44829635086019e-05	NA	NA	NA	K13496//UDP-glucosyl transferase 73C [EC:2.4.1.-]	gi|460413878|ref|XP_004252303.1|//PREDICTED: UDP-glycosyltransferase 73C1-like [Solanum lycopersicum]
Solyc09g075700.1.1	818	383.582584336659	187.059325376141	-1.03604133002959	0.00289760593738646	Down	0.000400628360417428	NA	GO:0016787//hydrolase activity	GO:0008152//metabolic process	K13258//2-hydroxyisoflavanone dehydratase [EC:4.2.1.105]	gi|460404114|ref|XP_004247529.1|//PREDICTED: 2-hydroxyisoflavanone dehydratase-like [Solanum lycopersicum]
Solyc02g081880.3.1	1296	1197.18370158242	2583.06161122498	1.10943751176857	7.24842239956392e-13	Up	8.86281896109208e-15	NA	GO:0046914//transition metal ion binding;GO:0048037//cofactor binding	NA	K15631//molybdenum cofactor sulfurtransferase [EC:2.8.1.9]	gi|460373645|ref|XP_004232625.1|//PREDICTED: mitochondrial amidoxime reducing component 2-like [Solanum lycopersicum]
Solyc04g063390.2.1	1202	28.3146959484373	11.5805090270345	-1.28985236872447	0.0437625962871836	Down	0.0108616195525414	NA	GO:0005515//protein binding	GO:0044267//cellular protein metabolic process	K03686//molecular chaperone DnaJ;K09503//DnaJ homolog subfamily A member 2	gi|460384012|ref|XP_004237709.1|//PREDICTED: chaperone protein dnaJ 10 [Solanum lycopersicum]
Solyc01g105920.3.1	2354	439.158568905883	72.2021680681328	-2.6046278902881	7.12987405466397e-12	Down	1.02468468355216e-13	NA	NA	GO:0016098//monoterpenoid metabolic process	K12742//isoprene synthase [EC:4.2.3.27]	gi|460369412|ref|XP_004230556.1|//PREDICTED: (-)-camphene/tricyclene synthase, chloroplastic-like [Solanum lycopersicum]
Solyc01g017090.2.1	668	116.640936886058	714.495672286954	2.6148510600451	1.10176151100924e-33	Up	1.49222778014795e-36	GO:0031224//intrinsic component of membrane;GO:0009534//chloroplast thylakoid	GO:0050136//NADH dehydrogenase (quinone) activity;GO:0048037//cofactor binding	GO:0022904//respiratory electron transport chain;GO:0051234//establishment of localization	K05577//NAD(P)H-quinone oxidoreductase subunit 5 [EC:1.6.5.3]	gi|813424168|ref|YP_009132008.1|//NADH dehydrogenase subunit 5 (chloroplast) [Solanum habrochaites]
Solyc06g084200.2.1	1090	82.289946455753	26.0667149480532	-1.65850740517006	0.00224229140298546	Down	0.000293232058520841	NA	NA	NA	NA	gi|723711193|ref|XP_010323046.1|//PREDICTED: uncharacterized protein LOC101253798 [Solanum lycopersicum]
Solyc10g076820.2.1	1490	30.6852475828396	63.2576920127278	1.0436956955376	0.0280565782920712	Up	0.00619925825091551	NA	NA	NA	K01179//endoglucanase [EC:3.2.1.4];K08869//aarF domain-containing kinase;K11865//protein MYSM1;K17613//calcineurin-binding protein cabin-1	gi|460407283|ref|XP_004249083.1|//PREDICTED: transcription factor DIVARICATA-like [Solanum lycopersicum]
Solyc11g067075.1.1	3428	222.019980192901	791.622668510051	1.83412341072921	6.74124917986104e-06	Up	3.52970297581389e-07	GO:0005634//nucleus;GO:0005886//plasma membrane;GO:0005737//cytoplasm	GO:0004674//protein serine/threonine kinase activity;GO:0005524//ATP binding	GO:0006468//protein phosphorylation;GO:0035556//intracellular signal transduction	K08286//protein-serine/threonine kinase [EC:2.7.11.-]	gi|460411265|ref|XP_004251034.1|//PREDICTED: serine/threonine-protein kinase D6PK-like [Solanum lycopersicum]
Solyc08g008470.2.1	246	47.4899350460656	13.9718835452106	-1.76509525984319	0.00338682787878597	Down	0.000483559510910187	NA	NA	NA	NA	gi|525314110|ref|NP_001266207.1|//kinesin light chain I2I isoform [Solanum lycopersicum]
Solyc11g018680.1.1	873	94.4135549137156	30.4910537213886	-1.63060799315628	0.00807470816129427	Down	0.00136735370331021	NA	NA	NA	K05681//ATP-binding cassette, subfamily G (WHITE), member 2	gi|460409951|ref|XP_004250400.1|//PREDICTED: ABC transporter G family member 25 [Solanum lycopersicum]
Solyc02g071520.3.1	1616	594.705977403328	186.668482052922	-1.67169821934856	6.09011397004433e-06	Down	3.15274523054214e-07	GO:0016020//membrane	NA	GO:0006810//transport	K15382//solute carrier family 50 (sugar transporter)	gi|460374425|ref|XP_004233011.1|//PREDICTED: bidirectional sugar transporter SWEET2a-like [Solanum lycopersicum]
Solyc02g093950.3.1	4448	271.54154133826	121.49425219922	-1.1602848606142	0.0156683113357639	Down	0.0030269668438355	NA	NA	NA	K15502//serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A;K13118//protein DGCR14	gi|460371942|ref|XP_004231793.1|//PREDICTED: ankyrin-3 isoform X1 [Solanum lycopersicum]
Solyc01g101090.3.1	1903	604.039338293598	1232.64669117786	1.02904493102103	8.99782618311574e-10	Up	1.94309715165855e-11	GO:0012505//endomembrane system;GO:0005622//intracellular	GO:0017137//Rab GTPase binding;GO:0005096//GTPase activator activity	GO:0006886//intracellular protein transport;GO:0090630//activation of GTPase activity;GO:0031338//regulation of vesicle fusion	K19944//TBC1 domain family member 10	gi|460369001|ref|XP_004230353.1|//PREDICTED: EVI5-like protein [Solanum lycopersicum]
Solyc01g112190.3.1	3096	50.67601012893	131.002371988898	1.37021808764973	0.00047412508934842	Up	4.69220214890892e-05	NA	NA	NA	K14833//nucleolar complex protein 2	gi|460370511|ref|XP_004231096.1|//PREDICTED: protein NLP2 [Solanum lycopersicum]
Solyc05g010420.2.1	1331	16389.40379316	3078.92439659157	-2.4122650262815	9.08860585320731e-10	Down	1.96612052881648e-11	NA	GO:0016831//carboxy-lyase activity	GO:0006596//polyamine biosynthetic process	K01611//S-adenosylmethionine decarboxylase [EC:4.1.1.50]	gi|350535302|ref|NP_001234699.1|//S-adenosylmethionine decarboxylase [Solanum lycopersicum]
Solyc09g082630.3.1	890	177.175421865458	413.919573153652	1.22417198719993	4.44911749575198e-10	Up	9.0723163382151e-12	NA	GO:0043169//cation binding;GO:0016701//oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	GO:0043102//amino acid salvage	K08967//1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase [EC:1.13.11.53 1.13.11.54]	gi|723732022|ref|XP_010326692.1|//PREDICTED: 1,2-dihydroxy-3-keto-5-methylthiopentene dioxygenase 1 isoform X1 [Solanum lycopersicum]
Solyc01g081270.2.1	1181	20.7589502339058	162.386469090599	2.96762602992261	1.08129924699918e-09	Up	2.36356231191317e-11	NA	NA	NA	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|460367326|ref|XP_004229525.1|//PREDICTED: glutathione transferase GST 23-like [Solanum lycopersicum]
Solyc01g109180.3.1	4013	573.83449399066	154.839752051782	-1.88985879059527	6.60817671845751e-09	Down	1.70798247012051e-10	GO:0005783//endoplasmic reticulum;GO:0009506//plasmodesma	GO:0004467//long-chain fatty acid-CoA ligase activity;GO:0031957//very long-chain fatty acid-CoA ligase activity	GO:0050832//defense response to fungus;GO:0010143//cutin biosynthetic process;GO:0010311//lateral root formation;GO:0001676//long-chain fatty acid metabolic process	K01897//long-chain acyl-CoA synthetase [EC:6.2.1.3]	gi|460370002|ref|XP_004230844.1|//PREDICTED: long chain acyl-CoA synthetase 2 [Solanum lycopersicum];gi|747082045|ref|XP_011088325.1|//PREDICTED: long chain acyl-CoA synthetase 2 [Sesamum indicum]
Solyc10g005320.3.1	1525	12765.5304502239	1673.16753710579	-2.93159967053981	3.05868080510501e-20	Down	1.36938681643151e-22	NA	GO:0016836//hydro-lyase activity;GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor;GO:0048037//cofactor binding	GO:0006568//tryptophan metabolic process	K01696//tryptophan synthase beta chain [EC:4.2.1.20]	gi|460405872|ref|XP_004248398.1|//PREDICTED: tryptophan synthase beta chain 1-like [Solanum lycopersicum]
Solyc02g089050.3.1	3941	129.654182320442	52.0692652609635	-1.31616479028249	0.0445656455834502	Down	0.0111249312728269	NA	NA	NA	NA	gi|460375736|ref|XP_004233660.1|//PREDICTED: protein LONGIFOLIA 1 [Solanum lycopersicum]
Solyc11g071450.2.1	349	21.9063119418258	75.2638111693024	1.78060972722542	0.0247035083396183	Up	0.00528829806066321	NA	NA	NA	NA	NA
Solyc10g085620.2.1	1917	151.346546934251	345.994770000019	1.19289447093125	6.36277230091265e-06	Up	3.30825858535037e-07	NA	NA	NA	K12741//heterogeneous nuclear ribonucleoprotein A1/A3;K06236//collagen, type I, alpha;K14491//two-component response regulator ARR-B family;K14317//nuclear pore complex protein Nup214	gi|971535702|ref|XP_006338935.2|//PREDICTED: uncharacterized protein LOC102592272 isoform X4 [Solanum tuberosum];gi|971535696|ref|XP_006338933.2|//PREDICTED: uncharacterized protein LOC102592272 isoform X1 [Solanum tuberosum];gi|723739703|ref|XP_010312321.1|//PREDICTED: uncharacterized protein LOC101256236 isoform X1 [Solanum lycopersicum]
Solyc12g087893.1.1	2590	160.822123244661	64.6533742052971	-1.31466831210735	0.0155056167983206	Down	0.00299145233039082	NA	NA	NA	NA	gi|747061925|ref|XP_011077451.1|//PREDICTED: uncharacterized protein LOC105161457 [Sesamum indicum];gi|723752186|ref|XP_010314585.1|//PREDICTED: transcription factor bHLH143-like isoform X2 [Solanum lycopersicum]
Solyc03g121295.1.1	912	731.913734666302	1714.4463167098	1.22799720715359	2.76621064313414e-08	Up	8.06551259755062e-10	NA	NA	NA	K03695//ATP-dependent Clp protease ATP-binding subunit ClpB;K04506//E3 ubiquitin-protein ligase SIAH1 [EC:2.3.2.27]	gi|460379746|ref|XP_004235622.1|//PREDICTED: jacalin-related lectin 19 [Solanum lycopersicum]
Solyc03g078650.3.1	3778	142.66989792072	45.9868412192838	-1.63338796185243	0.00271650485860524	Down	0.000369967930329232	NA	NA	NA	K11426//SET and MYND domain-containing protein	gi|460378597|ref|XP_004235056.1|//PREDICTED: uncharacterized protein LOC101260516 [Solanum lycopersicum]
Solyc05g051200.1.1	675	201.109819359361	57.1657538911191	-1.81476048408744	1.41039806074874e-05	Down	8.19813771202709e-07	NA	NA	GO:0050794//regulation of cellular process;GO:0050896//response to stimulus;GO:0006351//transcription, DNA-templated	K14516//ethylene-responsive transcription factor 1	gi|906847312|ref|NP_001234841.2|//ethylene-responsive factor 1 [Solanum lycopersicum]
Solyc07g065900.3.1	1372	678.764325890121	1923.31318271012	1.50261105542033	3.44690444053075e-17	Up	2.21753445948367e-19	NA	NA	NA	K01623//fructose-bisphosphate aldolase, class I [EC:4.1.2.13]	gi|840084522|ref|NP_001296956.1|//fructose-bisphosphate aldolase, cytoplasmic isozyme 1 [Solanum lycopersicum]
Solyc03g026330.3.1	2045	22.1078520050246	53.6104894414008	1.27795644639525	0.0128124016987157	Up	0.00237111376809566	NA	NA	NA	K05657//ATP-binding cassette, subfamily B (MDR/TAP), member 10	gi|460377131|ref|XP_004234348.1|//PREDICTED: uncharacterized protein LOC101262593 [Solanum lycopersicum]
Solyc06g072220.1.1	636	600.518918323496	216.874880144336	-1.46934673590427	2.62886525102685e-05	Down	1.67035346047391e-06	NA	NA	NA	NA	gi|460391746|ref|XP_004241480.1|//PREDICTED: miraculin-like [Solanum lycopersicum]
Solyc09g009840.1.1	867	4599.3110197086	2249.38400952286	-1.0318877849103	2.30132839788342e-06	Down	1.04503513026535e-07	NA	NA	NA	NA	gi|723727763|ref|XP_010325902.1|//PREDICTED: uncharacterized protein LOC101254416 [Solanum lycopersicum]
Solyc12g096680.1.1	1965	259.456350342398	102.565000044004	-1.33895334692365	0.0119562847002274	Down	0.00218343889898059	NA	NA	NA	K10683//BRCA1-associated RING domain protein 1;K11000//callose synthase [EC:2.4.1.-]	gi|460415673|ref|XP_004253182.1|//PREDICTED: pentatricopeptide repeat-containing protein At2g03880, mitochondrial [Solanum lycopersicum]
Solyc01g098790.2.1	4512	182.9132220034	77.5073457035424	-1.23875441264736	0.0332371997659429	Down	0.00766531356528329	NA	NA	NA	K13754//solute carrier family 24 (sodium/potassium/calcium exchanger), member 6	gi|460370857|ref|XP_004231265.1|//PREDICTED: uncharacterized protein LOC101262870 [Solanum lycopersicum]
Solyc07g005470.3.1	2325	158.889947556333	60.0025073772131	-1.40493315875807	0.0109098838617133	Down	0.00195868945779142	NA	NA	NA	K14545//ribosomal RNA-processing protein 7;K17046//protein DEK;K20720;K09506//DnaJ homolog subfamily A member 5;K18999//RNA polymerase II C-terminal domain phosphatase-like 3/4 [EC:3.1.3.16]	gi|460393980|ref|XP_004242584.1|//PREDICTED: reticulon-like protein B21 isoform X1 [Solanum lycopersicum];gi|723712097|ref|XP_010323183.1|//PREDICTED: reticulon-like protein B21 isoform X2 [Solanum lycopersicum]
Solyc03g044910.1.1	864	657.38314278757	1320.23938726441	1.0059931772458	5.66394897236911e-06	Up	2.89590167548895e-07	NA	NA	NA	K10249//elongation of very long chain fatty acids protein 4 [EC:2.3.1.199]	gi|460377815|ref|XP_004234683.1|//PREDICTED: elongation of fatty acids protein 3-like [Solanum lycopersicum]
Solyc04g040130.1.1	1128	3341.36477351888	1262.61567372586	-1.40402192337378	8.5726200478181e-09	Down	2.27377619778471e-10	NA	GO:0016705//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	GO:0044238//primary metabolic process	K10256//omega-6 fatty acid desaturase / acyl-lipid omega-6 desaturase (Delta-12 desaturase) [EC:1.14.19.6 1.14.19.22]	gi|970023105|ref|XP_015072887.1|//PREDICTED: delta(12)-fatty-acid desaturase FAD2-like [Solanum pennellii]
Solyc03g005090.3.1	3346	397.509404073187	185.063182086093	-1.10297108859476	1.07517828092169e-05	Down	6.01905674195436e-07	NA	NA	NA	K15502//serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A;K12897//transformer-2 protein;K06694//26S proteasome non-ATPase regulatory subunit 10	gi|460376440|ref|XP_004234006.1|//PREDICTED: uncharacterized protein LOC101252360 [Solanum lycopersicum]
Solyc07g026710.2.1	2924	35.4388875577772	6.8495798468802	-2.37124591676488	0.0161470546193827	Down	0.00314436247968115	NA	NA	NA	K17604//zinc finger SWIM domain-containing protein 3;K18789//xylogalacturonan beta-1,3-xylosyltransferase [EC:2.4.2.41];K14808//ATP-dependent RNA helicase DDX54/DBP10 [EC:3.6.4.13]	gi|565386601|ref|XP_006359098.1|//PREDICTED: uncharacterized protein LOC102578363 isoform X3 [Solanum tuberosum];gi|113205233|gb|AAT39304.2|//Transposon MuDR mudrA-like protein, putative [Solanum demissum]
Solyc02g083860.3.1	1311	287.188414855045	112.004079907659	-1.35844626674061	0.000673672593592467	Down	7.06874666489612e-05	NA	GO:0043169//cation binding;GO:0016701//oxidoreductase activity, acting on single donors with incorporation of molecular oxygen;GO:0019842//vitamin binding;GO:0016706//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors	GO:0009699//phenylpropanoid biosynthetic process	K00475//naringenin 3-dioxygenase [EC:1.14.11.9]	gi|460373360|ref|XP_004232488.1|//PREDICTED: naringenin,2-oxoglutarate 3-dioxygenase [Solanum lycopersicum]
Solyc01g094220.3.1	1151	51.1109071875148	122.555109370155	1.2617275283382	9.94159538745131e-05	Up	7.60393657738469e-06	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K15095//(+)-neomenthol dehydrogenase [EC:1.1.1.208]	gi|723660951|ref|XP_010326194.1|//PREDICTED: (+)-neomenthol dehydrogenase isoform X1 [Solanum lycopersicum]
Solyc03g025390.3.1	1359	594.752605738709	251.274124816279	-1.24302757139988	0.00101112605150959	Down	0.000113742170579898	NA	GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	GO:0008152//metabolic process	K19329//WW domain-containing oxidoreductase	gi|460377272|ref|XP_004234417.1|//PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Solanum lycopersicum]
Solyc08g066600.3.1	3665	1504.10014561878	698.295494719515	-1.10699105752445	7.93118573302038e-07	Down	3.16889362244832e-08	NA	NA	NA	NA	gi|460399269|ref|XP_004245164.1|//PREDICTED: uncharacterized protein LOC101253812 [Solanum lycopersicum]
Solyc03g112190.3.1	1929	136.429002603048	62.9515632742492	-1.11583626073272	0.00012159014088273	Down	9.58814654966899e-06	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial	gi|460381053|ref|XP_004236267.1|//PREDICTED: pentatricopeptide repeat-containing protein At3g48250, chloroplastic [Solanum lycopersicum]
Solyc02g087950.3.1	7154	1416.19434518012	2901.67122410882	1.03486480219942	2.7955785071783e-06	Up	1.30418259928559e-07	NA	NA	NA	NA	gi|460372818|ref|XP_004232221.1|//PREDICTED: uncharacterized protein LOC101253548 isoform X1 [Solanum lycopersicum]
Solyc07g055930.3.1	2265	225.195094116386	575.522928639714	1.35369800739254	0.000155231518888802	Up	1.27607550328078e-05	NA	NA	NA	K20867	gi|460395322|ref|XP_004243233.1|//PREDICTED: probable galacturonosyltransferase 15 [Solanum lycopersicum]
Solyc03g096890.2.1	5022	111.491499021798	31.3834728052346	-1.82885680130478	0.0371067386890452	Down	0.00882297172741783	GO:0009524//phragmoplast	GO:0005524//ATP binding;GO:0004672//protein kinase activity	GO:0000911//cytokinesis by cell plate formation;GO:0009558//embryo sac cellularization;GO:0006468//protein phosphorylation	K06228//fused [EC:2.7.11.1]	gi|723683614|ref|XP_010318270.1|//PREDICTED: serine/threonine-protein kinase TIO isoform X1 [Solanum lycopersicum];gi|723683617|ref|XP_010318271.1|//PREDICTED: serine/threonine-protein kinase TIO isoform X2 [Solanum lycopersicum]
Solyc02g076690.3.1	1902	118.616882793691	383.073920149593	1.69131344583135	2.77397883925817e-14	Up	2.54646665454851e-16	NA	NA	NA	K16290//xylem cysteine proteinase [EC:3.4.22.-];K16292//KDEL-tailed cysteine endopeptidase [EC:3.4.22.-]	gi|460374489|ref|XP_004233043.1|//PREDICTED: low-temperature-induced cysteine proteinase-like [Solanum lycopersicum]
Solyc10g009170.2.1	2339	19.5022481050385	64.3800590398725	1.72297346083986	0.000390436868836905	Up	3.74056606321989e-05	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K03252//translation initiation factor 3 subunit C;K19995//secretory carrier-associated membrane protein	gi|723733869|ref|XP_010327022.1|//PREDICTED: uncharacterized protein LOC101254342 isoform X1 [Solanum lycopersicum]
Solyc09g074300.1.1	429	475.585783956117	101.125966532661	-2.23355209961066	0.0176853536482409	Down	0.00352401678704011	GO:0043231//intracellular membrane-bounded organelle;GO:0000785//chromatin	GO:0003676//nucleic acid binding	GO:0034728//nucleosome organization	K11251//histone H2A	gi|460404012|ref|XP_004247479.1|//PREDICTED: histone H2AX-like [Solanum lycopersicum]
Solyc06g060870.1.1	1557	148.408036293013	57.1354521874071	-1.37711110428037	0.00751335556653871	Down	0.0012572970876482	NA	NA	NA	K16818//phospholipase A1 [EC:3.1.1.32]	gi|460392773|ref|XP_004241988.1|//PREDICTED: phospholipase A1-Ibeta2, chloroplastic-like [Solanum lycopersicum]
Solyc07g049190.3.1	744	32.0164738816328	10.8285710831302	-1.56397154578963	0.0113298795509693	Down	0.00204645416569615	NA	GO:0000166//nucleotide binding;GO:0004672//protein kinase activity	GO:0043170//macromolecule metabolic process	K13429//chitin elicitor receptor kinase 1	gi|987996520|ref|NP_001233930.2|//LysM receptor-like kinase isoform 1a precursor [Solanum lycopersicum]
Solyc05g008090.3.1	2795	1651.64335840744	706.06444792298	-1.22603041681548	2.58552129565221e-06	Down	1.19451472951878e-07	NA	NA	NA	NA	gi|460386304|ref|XP_004238839.1|//PREDICTED: uncharacterized protein LOC101253184 [Solanum lycopersicum]
Solyc04g074770.2.1	1095	15499.3609000466	4927.33980089084	-1.65332785688141	1.96633623614903e-13	Down	2.11577187185336e-15	NA	NA	NA	NA	gi|565395360|ref|XP_006363309.1|//PREDICTED: uncharacterized protein LOC102591088 [Solanum tuberosum]
Solyc04g081530.1.1	468	3555.60500649012	7640.28495315738	1.10353138269498	2.83440650724323e-08	Up	8.29634410321758e-10	NA	GO:0005515//protein binding	NA	K03686//molecular chaperone DnaJ	gi|934635627|ref|NP_001234377.2|//DNAJ-like protein [Solanum lycopersicum]
Solyc07g008920.3.1	1594	621.55099415376	277.554509985288	-1.16310162408033	4.31491681799833e-07	Down	1.61525290967206e-08	NA	NA	NA	K20464//oxysterol-binding protein-related protein 5/8	gi|723713085|ref|XP_010323355.1|//PREDICTED: oxysterol-binding protein-related protein 4C [Solanum lycopersicum]
BGI_novel_G000436	2413	174.835366246129	744.854078098505	2.09096077240143	1.25725004086966e-10	Up	2.31299951085502e-12	NA	NA	NA	NA	NA
Solyc06g071630.2.1	2278	201.779775877855	90.8799413346152	-1.1507477736015	3.7392581302474e-05	Down	2.49002516574037e-06	NA	NA	NA	K13140//integrator complex subunit 3	gi|460391853|ref|XP_004241533.1|//PREDICTED: integrator complex subunit 3 [Solanum lycopersicum]
Solyc02g087120.3.1	3699	201.248999985295	94.728158937395	-1.08711636366188	0.0354381821205803	Down	0.00832223975909188	NA	NA	NA	K10529//alpha-dioxygenase [EC:1.-.-.-]	gi|460375812|ref|XP_004233698.1|//PREDICTED: protein ALTERED XYLOGLUCAN 4-like [Solanum lycopersicum]
BGI_novel_G000191	950	8.77721743361225	51.3918246675198	2.54970332391162	0.000318537514731495	Up	2.93850258134547e-05	NA	NA	NA	K05747//Wiskott-Aldrich syndrome protein	gi|970021220|ref|XP_015071868.1|//PREDICTED: extensin-3 isoform X2 [Solanum pennellii]
Solyc02g068365.1.1	463	17.7772437241996	3.537251771439	-2.32933084390386	0.0147251532561433	Down	0.00280376225091577	NA	NA	NA	K13511//monolysocardiolipin acyltransferase [EC:2.3.1.-]	gi|460374954|ref|XP_004233273.1|//PREDICTED: N-acylphosphatidylethanolamine synthase isoform X2 [Solanum lycopersicum]
Solyc02g082830.2.1	993	1847.24687489023	503.011502264125	-1.87671339251582	8.91261752612668e-18	Down	5.43206937258285e-20	NA	NA	NA	K00831//phosphoserine aminotransferase [EC:2.6.1.52]	gi|460373499|ref|XP_004232556.1|//PREDICTED: phosphoserine aminotransferase 2, chloroplastic-like [Solanum lycopersicum]
Solyc05g014360.1.1	1323	36.6495865226874	74.0361682460066	1.01443330812664	0.0258142206179835	Up	0.00559599470281493	NA	NA	NA	NA	NA
BGI_novel_G000464	759	1412.06691082014	3297.0811873971	1.22338096003544	1.73055425528275e-05	Up	1.03064988190843e-06	GO:0015934//large ribosomal subunit;GO:0005739//mitochondrion;GO:0009507//chloroplast	GO:0016740//transferase activity;GO:0003735//structural constituent of ribosome;GO:0019843//rRNA binding	GO:0006412//translation	K02886//large subunit ribosomal protein L2	gi|394831167|ref|YP_006503856.1|//ribosomal protein L2 (chloroplast) [Datura stramonium]
Solyc09g011520.3.1	1256	281.925765172468	730.580942118764	1.37372878843855	3.78213915888953e-06	Up	1.82812845840446e-07	NA	GO:0016765//transferase activity, transferring alkyl or aryl (other than methyl) groups;GO:0016740//transferase activity	GO:0009755//hormone-mediated signaling pathway	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|460401764|ref|XP_004246386.1|//PREDICTED: probable glutathione S-transferase [Solanum lycopersicum];gi|723727223|ref|XP_010325822.1|//PREDICTED: LOW QUALITY PROTEIN: probable glutathione S-transferase [Solanum lycopersicum]
Solyc06g005520.3.1	2210	1484.91053389224	561.99629043312	-1.4017434982289	4.93825724515482e-06	Down	2.48027593012855e-07	NA	NA	NA	K00924;K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460389444|ref|XP_004240362.1|//PREDICTED: probable receptor-like protein kinase At5g47070 isoform X1 [Solanum lycopersicum];gi|723703644|ref|XP_010321720.1|//PREDICTED: probable receptor-like protein kinase At5g47070 isoform X2 [Solanum lycopersicum]
Solyc02g090360.3.1	2044	2095.07618130963	5543.50198003541	1.40379494946373	3.91996150542068e-09	Up	9.52509544852366e-11	NA	NA	NA	K19791//iron transport multicopper oxidase	gi|460372481|ref|XP_004232058.1|//PREDICTED: L-ascorbate oxidase homolog [Solanum lycopersicum]
Solyc03g097740.1.1	1665	479.266774467243	201.696663269707	-1.24864171029733	0.000223096271295013	Down	1.9455874975991e-05	NA	NA	NA	K08332//vacuolar protein 8	gi|460379152|ref|XP_004235328.1|//PREDICTED: uncharacterized protein LOC101261696 [Solanum lycopersicum]
Solyc09g007830.3.1	1185	196.9174883471	53.8256923387879	-1.8712243669994	0.0133783646307611	Down	0.00250001268325773	NA	NA	NA	K06966//uncharacterized protein	gi|460402309|ref|XP_004246656.1|//PREDICTED: cytokinin riboside 5'-monophosphate phosphoribohydrolase LOG3 [Solanum lycopersicum]
Solyc03g121110.3.1	2609	59.5380319829755	16.3671814615711	-1.86300563294687	0.000850133408061986	Down	9.26739413338092e-05	NA	NA	NA	K17710//pentatricopeptide repeat domain-containing protein 1	gi|460381314|ref|XP_004236396.1|//PREDICTED: pentatricopeptide repeat-containing protein At1g51965, mitochondrial [Solanum lycopersicum]
Solyc02g066930.3.1	2045	296.533983438522	673.540339183564	1.18356690287657	2.04473628432107e-05	Up	1.24468897969582e-06	NA	GO:0005488//binding	NA	K12741//heterogeneous nuclear ribonucleoprotein A1/A3	gi|460375180|ref|XP_004233385.1|//PREDICTED: glycine-rich RNA-binding protein 4, mitochondrial [Solanum lycopersicum]
Solyc06g067890.3.1	3023	891.253379158008	445.369317551778	-1.00083347030671	1.10455746901602e-05	Down	6.20014952510123e-07	NA	NA	NA	NA	gi|460392218|ref|XP_004241714.1|//PREDICTED: uncharacterized protein LOC101268405 [Solanum lycopersicum]
Solyc06g005090.3.1	864	35.7165642457268	95.1951164216342	1.41429425702244	0.00437600155222259	Up	0.000655247786976897	NA	NA	NA	K13944	gi|970035067|ref|XP_015078864.1|//PREDICTED: LOB domain-containing protein 1-like [Solanum pennellii]
Solyc01g095620.3.1	1431	20836.4138184305	7962.96214606394	-1.38772989037501	6.19786212719813e-18	Down	3.66088921734427e-20	NA	GO:0035251//UDP-glucosyltransferase activity	NA	K08237//hydroquinone glucosyltransferase [EC:2.4.1.218]	gi|994306780|ref|NP_001307116.1|//hydroquinone glucosyltransferase [Solanum lycopersicum]
BGI_novel_G000230	3334	20.6271102963905	61.1190594479113	1.56708061751176	0.0107768258093286	Up	0.00193155749268778	NA	NA	NA	NA	gi|113205247|gb|AAT39965.2|//hypothetical protein SDM1_29t00005 [Solanum demissum]
Solyc04g071340.4.1	1871	403.653454541692	904.936280047142	1.16469897160477	6.35046024789908e-07	Up	2.47997657536465e-08	GO:0044424//intracellular part;GO:0005737//cytoplasm	GO:0043169//cation binding;GO:0046872//metal ion binding;GO:0019203//carbohydrate phosphatase activity;GO:0042132//fructose 1,6-bisphosphate 1-phosphatase activity	GO:0005975//carbohydrate metabolic process;GO:0016311//dephosphorylation	K03841//fructose-1,6-bisphosphatase I [EC:3.1.3.11]	gi|460384171|ref|XP_004237787.1|//PREDICTED: fructose-1,6-bisphosphatase, cytosolic [Solanum lycopersicum];gi|970024774|ref|XP_015073694.1|//PREDICTED: fructose-1,6-bisphosphatase, cytosolic [Solanum pennellii]
Solyc12g097000.2.1	973	608.9273412188	1280.1214624142	1.07193870726552	3.23747766065915e-12	Up	4.42138596997468e-14	NA	NA	NA	K03283//heat shock 70kDa protein 1/8;K08852//serine/threonine-protein kinase/endoribonuclease IRE1 [EC:2.7.11.1 3.1.26.-]	gi|970068067|ref|XP_015061155.1|//PREDICTED: TMV resistance protein N-like [Solanum pennellii]
Solyc05g005160.3.1	1767	6473.27124555955	1924.49902082295	-1.75001202040381	1.55377319562662e-10	Down	2.91113262386025e-12	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004774//succinate-CoA ligase activity	NA	K01648//ATP citrate (pro-S)-lyase [EC:2.3.3.8]	gi|460385918|ref|XP_004238647.1|//PREDICTED: ATP-citrate synthase alpha chain protein 2 [Solanum lycopersicum]
Solyc08g066210.3.1	3786	1990.00299953705	395.623665028371	-2.33056997384103	1.09397814561239e-17	Down	6.79106072332748e-20	GO:0016020//membrane	GO:0004674//protein serine/threonine kinase activity;GO:0000166//nucleotide binding;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K00924	gi|460399227|ref|XP_004245143.1|//PREDICTED: receptor-like protein kinase HSL1 [Solanum lycopersicum]
Solyc02g063546.1.1	3037	278.072092754433	693.020897789969	1.31743989351941	2.93335675102533e-06	Up	1.37728714269361e-07	GO:0031224//intrinsic component of membrane;GO:0016021//integral component of membrane	GO:0016853//isomerase activity;GO:0050660//flavin adenine dinucleotide binding;GO:0004497//monooxygenase activity;GO:0004506//squalene monooxygenase activity;GO:0050662//coenzyme binding	GO:0008152//metabolic process;GO:0055114//oxidation-reduction process	K00511//squalene monooxygenase [EC:1.14.14.17]	gi|815930012|ref|NP_001295264.1|//squalene epoxidase 3-like [Solanum lycopersicum]
BGI_novel_G000360	529	39.1127187547309	8.85257831209348	-2.14346821616053	0.00309129032186112	Down	0.000432408480687722	NA	GO:0003964//RNA-directed DNA polymerase activity;GO:0008270//zinc ion binding;GO:0004519//endonuclease activity;GO:0004190//aspartic-type endopeptidase activity;GO:0003676//nucleic acid binding	GO:0015074//DNA integration;GO:0006508//proteolysis;GO:0090305//nucleic acid phosphodiester bond hydrolysis;GO:0006278//RNA-dependent DNA replication	K05658//ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:3.6.3.44];K15015//solute carrier family 32 (vesicular inhibitory amino acid transporter);K03644//lipoyl synthase [EC:2.8.1.8]	gi|130582|sp|P10978.1|POLX_TOBAC//RecName: Full=Retrovirus-related Pol polyprotein from transposon TNT 1-94; Includes: RecName: Full=Protease; Includes: RecName: Full=Reverse transcriptase; Includes: RecName: Full=Endonuclease
Solyc09g091280.3.1	3806	1815.30940260111	902.360386925051	-1.00843982232774	3.47516404567122e-12	Down	4.77214024330322e-14	GO:0043231//intracellular membrane-bounded organelle;GO:0005634//nucleus	NA	GO:0006357//regulation of transcription from RNA polymerase II promoter;GO:0048523//negative regulation of cellular process;GO:0010564//regulation of cell cycle process;GO:0051726//regulation of cell cycle	K04681//retinoblastoma-like protein 1	gi|525313906|ref|NP_001266162.1|//retinoblastoma-related protein 1 [Solanum lycopersicum]
Solyc01g102670.3.1	4283	732.868852481897	266.833515189025	-1.45761516466074	2.2147302678854e-06	Down	9.98211761070997e-08	NA	NA	NA	K01800//maleylacetoacetate isomerase [EC:5.2.1.2]	gi|460369069|ref|XP_004230386.1|//PREDICTED: uncharacterized protein LOC101247758 [Solanum lycopersicum]
Solyc11g005640.2.1	3776	5605.2151058032	13971.2132791389	1.31761566769653	6.04979768911555e-12	Up	8.58078904739112e-14	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460408910|ref|XP_004249884.1|//PREDICTED: G-type lectin S-receptor-like serine/threonine-protein kinase RLK1 [Solanum lycopersicum]
Solyc11g008140.2.1	1851	101.914864297082	49.2600310784223	-1.0488750409676	0.0125478057912491	Down	0.00231412129378115	NA	NA	NA	K01728//pectate lyase [EC:4.2.2.2]	gi|460409224|ref|XP_004250039.1|//PREDICTED: probable pectate lyase 13 isoform X1 [Solanum lycopersicum];gi|697121395|ref|XP_009614672.1|//PREDICTED: probable pectate lyase 13 isoform X1 [Nicotiana tomentosiformis]
Solyc03g116840.2.1	2453	566.805507605342	264.594220053908	-1.0990722299676	2.22370749510687e-05	Down	1.38040532991961e-06	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K00872//homoserine kinase [EC:2.7.1.39];K17479//glutaredoxin domain-containing cysteine-rich protein 1;K10398//kinesin family member 11;K05658//ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:3.6.3.44];K11593//eukaryotic translation initiation factor 2C	gi|970013600|ref|XP_015067772.1|//PREDICTED: zinc finger BED domain-containing protein DAYSLEEPER-like [Solanum pennellii]
Solyc03g005570.3.1	1354	1694.03764541546	305.521568391207	-2.47111979876871	3.57132506013556e-39	Down	3.49339546890611e-42	NA	NA	NA	K09422//myb proto-oncogene protein, plant	gi|460376508|ref|XP_004234040.1|//PREDICTED: myb-related protein Myb4 [Solanum lycopersicum]
Solyc06g065190.1.1	978	95.1239371416253	38.8441381294987	-1.2921115272847	0.00124511423200402	Down	0.000145497547201072	NA	NA	NA	K16221//transcription factor TCP21 (protein CCA1 HIKING EXPEDITION)	gi|350539617|ref|NP_001233966.1|//TCP transcription factor 13 [Solanum lycopersicum]
Solyc03g026280.3.1	897	8643.49244936835	1866.83052812441	-2.21102339395849	2.32055438924333e-12	Down	3.04692807315998e-14	GO:0043231//intracellular membrane-bounded organelle	GO:0001071//nucleic acid binding transcription factor activity;GO:0003676//nucleic acid binding	GO:0006351//transcription, DNA-templated	K09286//EREBP-like factor	gi|350539177|ref|NP_001234123.1|//CBF1 protein [Solanum lycopersicum]
Solyc05g047420.3.1	2100	588.029924605807	227.582768741445	-1.36949824589173	1.82041380305274e-13	Down	1.9313645314555e-15	NA	NA	NA	K03678//exosome complex component RRP45	gi|460388945|ref|XP_004240124.1|//PREDICTED: protein RRP45A [Solanum lycopersicum]
Solyc04g015580.3.1	3810	335.779160979835	163.643187813749	-1.03695915026593	6.95257479596813e-06	Down	3.65677184528346e-07	NA	NA	NA	NA	gi|723688925|ref|XP_010319193.1|//PREDICTED: protein EFR3 homolog B isoform X3 [Solanum lycopersicum]
Solyc03g098440.3.1	1018	288.875022816937	695.226402853793	1.26703740427687	0.000703808645838624	Up	7.41673445069219e-05	NA	NA	NA	K09553//stress-induced-phosphoprotein 1	gi|460379289|ref|XP_004235396.1|//PREDICTED: uncharacterized protein LOC101257642 [Solanum lycopersicum]
Solyc08g068790.2.1	642	735.538849308721	178.234616333157	-2.04502398189506	1.79018359821239e-12	Down	2.31013158083841e-14	NA	GO:0016407//acetyltransferase activity	NA	NA	gi|460399518|ref|XP_004245286.1|//PREDICTED: tyramine N-feruloyltransferase 4/11-like [Solanum lycopersicum]
Solyc00g057880.3.1	1754	24.4770543509389	4.0566137390679	-2.59308210555019	0.00137065067769875	Down	0.000163983038189693	NA	NA	NA	K19983//exocyst complex component 1	gi|697161779|ref|XP_009589681.1|//PREDICTED: exocyst complex component SEC3A-like [Nicotiana tomentosiformis]
Solyc08g007660.2.1	1141	8.79338877125388	26.1712626613931	1.57349237110833	0.0253000228241023	Up	0.00545216443703755	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13199//plasminogen activator inhibitor 1 RNA-binding protein;K01183//chitinase [EC:3.2.1.14]	gi|723720405|ref|XP_010324676.1|//PREDICTED: subtilisin-like protease [Solanum lycopersicum]
Solyc05g008400.3.1	1391	740.720802052856	328.10633260077	-1.17476641494381	3.28696448033083e-11	Down	5.28041321708527e-13	GO:0043231//intracellular membrane-bounded organelle;GO:0005634//nucleus	NA	GO:0016480//negative regulation of transcription from RNA polymerase III promoter;GO:0006359//regulation of transcription from RNA polymerase III promoter	K07953//GTP-binding protein SAR1 [EC:3.6.5.-]	gi|460386356|ref|XP_004238864.1|//PREDICTED: repressor of RNA polymerase III transcription MAF1 homolog [Solanum lycopersicum]
Solyc09g092520.3.1	1265	119.556427872872	958.08815195465	3.00246670413803	2.04868785486793e-20	Up	9.09500251596749e-23	GO:0030312//external encapsulating structure;GO:0005576//extracellular region	GO:0016758//transferase activity, transferring hexosyl groups;GO:0016798//hydrolase activity, acting on glycosyl bonds	GO:0044042//glucan metabolic process	K08235//xyloglucan:xyloglucosyl transferase [EC:2.4.1.207]	gi|836469025|ref|NP_001296797.1|//brassinosteroid-regulated protein BRU1 precursor [Solanum lycopersicum]
Solyc05g056060.3.1	1522	125.376427760429	28.8659803572541	-2.11882400139855	1.89078102926169e-05	Down	1.13532224330386e-06	NA	NA	NA	NA	gi|970029622|ref|XP_015076137.1|//PREDICTED: uncharacterized protein LOC107020332 [Solanum pennellii]
Solyc08g023580.3.1	2297	63.0405253875258	128.560882576067	1.02810027476832	0.00576377412450733	Up	0.000913139685413858	NA	NA	NA	K15361//WD repeat-containing protein 48	gi|723721619|ref|XP_010324800.1|//PREDICTED: LOW QUALITY PROTEIN: WD repeat-containing protein 48 homolog [Solanum lycopersicum];gi|565382818|ref|XP_006357727.1|//PREDICTED: WD repeat-containing protein 48-like [Solanum tuberosum]
Solyc01g080570.3.1	3342	2354.52195237279	1103.57155092441	-1.0932540027486	0.000589844460220079	Down	6.05600275372684e-05	NA	NA	NA	K01240//uridine nucleosidase [EC:3.2.2.3];K14319//Ran GTPase-activating protein 1	gi|697106453|ref|XP_009607062.1|//PREDICTED: uncharacterized protein LOC104101329 [Nicotiana tomentosiformis];gi|460367244|ref|XP_004229485.1|//PREDICTED: uncharacterized protein LOC101244900 [Solanum lycopersicum]
Solyc08g013730.3.1	2696	3237.10370470189	1584.59755741507	-1.03058710135167	2.83742557162945e-05	Down	1.82543180116116e-06	GO:0031224//intrinsic component of membrane	NA	GO:0051234//establishment of localization	K09874//aquaporin NIP	gi|565324206|ref|NP_001274288.1|//probable aquaporin NIP5-1-like [Solanum lycopersicum]
Solyc09g062970.1.1	273	38.6138794151178	4.76821800712901	-3.017597400889	0.00119802865379653	Down	0.000138913630963164	NA	NA	NA	NA	NA
Solyc12g088830.2.1	3709	52.7466936409707	130.461977010173	1.30647682800942	0.000247560444572556	Up	2.19525947275212e-05	NA	NA	NA	K17618//ubiquitin-like domain-containing CTD phosphatase 1 [EC:3.1.3.16];K20473//neuroblastoma-amplified sequence;K20478//golgin subfamily B member 1	gi|723752395|ref|XP_010314615.1|//PREDICTED: protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1-like [Solanum lycopersicum]
Solyc09g056430.3.1	1825	503.611733533725	188.565818389747	-1.41724371626026	1.91628365693056e-05	Down	1.15351913133518e-06	NA	GO:0016301//kinase activity	NA	K20714	gi|460403097|ref|XP_004247037.1|//PREDICTED: serine/threonine-protein kinase OXI1 [Solanum lycopersicum]
Solyc08g080200.3.1	2861	1191.99551194105	541.353201270357	-1.13873672341324	0.000174488253100631	Down	1.46719806501095e-05	GO:0016021//integral component of membrane	NA	GO:0055085//transmembrane transport	K15403//fatty acid omega-hydroxy dehydrogenase [EC:1.1.-.-];K00108//choline dehydrogenase [EC:1.1.99.1]	gi|976902058|gb|KVH90016.1|//Glucose-methanol-choline oxidoreductase, C-terminal, partial [Cynara cardunculus var. scolymus];gi|460400269|ref|XP_004245658.1|//PREDICTED: SPX domain-containing membrane protein At4g22990-like isoform X1 [Solanum lycopersicum];gi|723724585|ref|XP_010325437.1|//PREDICTED: SPX domain-containing membrane protein At4g22990-like isoform X2 [Solanum lycopersicum]
Solyc03g026000.3.1	901	180.385548743987	55.6286587682107	-1.69718353726443	5.48822659014823e-08	Down	1.69313235662963e-09	NA	NA	NA	K08360//cytochrome b-561 [EC:1.16.5.1]	gi|460377181|ref|XP_004234373.1|//PREDICTED: uncharacterized protein LOC101244747 [Solanum lycopersicum]
Solyc07g053820.3.1	2192	76.1315499578664	21.3483517665632	-1.83436976166564	0.0401103892110488	Down	0.00971220710919151	NA	NA	NA	K02178//checkpoint serine/threonine-protein kinase [EC:2.7.11.1]	gi|460396507|ref|XP_004243814.1|//PREDICTED: mitotic checkpoint serine/threonine-protein kinase BUB1 [Solanum lycopersicum]
Solyc07g048085.1.1	1209	115.127761143242	42.2884299053312	-1.44490085555818	0.025678949459077	Down	0.00556073965290212	NA	NA	NA	NA	gi|970042949|ref|XP_015082872.1|//PREDICTED: fasciclin-like arabinogalactan protein 7 [Solanum pennellii];gi|460395937|ref|XP_004243536.1|//PREDICTED: fasciclin-like arabinogalactan protein 7 [Solanum lycopersicum]
Solyc03g045070.1.1	1383	23.0624384408843	73.3331889884931	1.66892121791774	0.00537608170317916	Up	0.000839582962750064	GO:0031224//intrinsic component of membrane	GO:0015101//organic cation transmembrane transporter activity	GO:0015696//ammonium transport	K03320//ammonium transporter, Amt family	gi|350535841|ref|NP_001234216.1|//ammonium transporter 1 member 3 [Solanum lycopersicum]
Solyc01g100660.3.1	900	2506.96369325053	1074.89513774127	-1.22174517928923	5.37402934342816e-15	Down	4.3671570285195e-17	NA	NA	NA	NA	gi|723663220|ref|XP_010313623.1|//PREDICTED: transcription factor bHLH149 [Solanum lycopersicum]
Solyc01g109150.4.1	1726	60.2828949515881	9.97091456617091	-2.59595095611365	0.000612009995972328	Down	6.31581421727651e-05	NA	GO:0005506//iron ion binding	NA	K01723//hydroperoxide dehydratase [EC:4.2.1.92]	gi|807045803|ref|NP_001234502.2|//cytochrome P450 CYP74C4 [Solanum lycopersicum]
Solyc03g097370.3.1	4255	384.012054671555	1032.12073428843	1.42638823766212	3.20206317846302e-08	Up	9.46885499726086e-10	GO:0009941//chloroplast envelope;GO:0009570//chloroplast stroma	GO:0005524//ATP binding;GO:0016787//hydrolase activity;GO:0032559//adenyl ribonucleotide binding;GO:0003824//catalytic activity;GO:0003676//nucleic acid binding	NA	K14326//regulator of nonsense transcripts 1 [EC:3.6.4.-];K19036//ATP-dependent RNA/DNA helicase IGHMBP2 [EC:3.6.4.12 3.6.4.13]	gi|460379049|ref|XP_004235277.1|//PREDICTED: DNA-binding protein SMUBP-2 [Solanum lycopersicum];gi|590639873|ref|XP_007029793.1|//P-loop containing nucleoside triphosphate hydrolases superfamily protein isoform 1 [Theobroma cacao]
Solyc09g014350.3.1	1784	132.591297090671	23.3495545641156	-2.50551915099018	5.58057795096152e-06	Down	2.84697656189008e-07	NA	GO:0016747//transferase activity, transferring acyl groups other than amino-acyl groups	NA	K13508//glycerol-3-phosphate acyltransferase [EC:2.3.1.15]	gi|460401656|ref|XP_004246333.1|//PREDICTED: glycerol-3-phosphate 2-O-acyltransferase 6 [Solanum lycopersicum]
Solyc08g016581.1.1	553	120.67229955627	247.825463569036	1.03822988706687	0.0108453897554412	Up	0.00194629454979137	NA	NA	NA	NA	gi|723680494|ref|XP_010317748.1|//PREDICTED: putative ubiquitin-like-specific protease 1B [Solanum lycopersicum]
Solyc07g056270.3.1	2432	341.303398770876	97.8446979152598	-1.80248920096865	5.67772526059087e-08	Down	1.7580014633056e-09	NA	GO:0032559//adenyl ribonucleotide binding;GO:0004702//receptor signaling protein serine/threonine kinase activity	GO:0006464//cellular protein modification process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460395272|ref|XP_004243208.1|//PREDICTED: probable receptor-like protein kinase At2g42960 [Solanum lycopersicum]
Solyc12g013525.1.1	2530	274.754390850691	134.826296258543	-1.02704063267466	0.0128922080359484	Down	0.00239024835218787	NA	NA	NA	K11252//histone H2B	gi|460413447|ref|XP_004252100.1|//PREDICTED: uncharacterized protein LOC101255966 [Solanum lycopersicum];gi|970064485|ref|XP_015059212.1|//PREDICTED: uncharacterized protein LOC107005197 [Solanum pennellii]
Solyc01g097080.1.1	792	15.8778658713911	4.32202163913153	-1.87723881377369	0.0154090276500003	Down	0.00296760017081834	NA	NA	NA	NA	gi|723661931|ref|XP_010327588.1|//PREDICTED: uncharacterized protein LOC104649746 isoform X2 [Solanum lycopersicum]
Solyc05g056370.3.1	2733	1037.75414266814	2459.2454017029	1.24475101377631	1.36999523645626e-05	Up	7.92205672849235e-07	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13418//somatic embryogenesis receptor kinase 1 [EC:2.7.10.1 2.7.11.1]	gi|697172098|ref|XP_009594983.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g63710 isoform X2 [Nicotiana tomentosiformis];gi|970030482|ref|XP_015076523.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At5g63710 isoform X1 [Solanum pennellii]
Solyc01g060130.3.1	1033	2924.9771637229	353.824793574745	-3.0473183104428	8.26036616672732e-43	Down	6.21547491853072e-46	GO:0043231//intracellular membrane-bounded organelle	GO:0032561//guanyl ribonucleotide binding	GO:0015031//protein transport	K07953//GTP-binding protein SAR1 [EC:3.6.5.-]	gi|350539267|ref|NP_001234640.1|//GTP-binding protein SAR2 [Solanum lycopersicum]
Solyc10g074880.2.1	1555	2444.5502394776	498.661340054161	-2.29343679140423	1.90546077963162e-51	Down	9.31940938119305e-55	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K07562//nonsense-mediated mRNA decay protein 3	gi|460407171|ref|XP_004249028.1|//PREDICTED: uncharacterized protein LOC101260284 [Solanum lycopersicum]
Solyc03g120320.1.1	1068	942.995457934312	134.144700236986	-2.81346076397436	7.89367840252425e-22	Down	2.70250088273027e-24	NA	NA	NA	NA	gi|723685332|ref|XP_010318559.1|//PREDICTED: F-box/kelch-repeat protein At1g80440-like [Solanum lycopersicum]
Solyc07g021340.3.1	512	4.87108552635463	18.8027958311898	1.9486319762106	0.0135529605117899	Up	0.0025392679965656	NA	NA	NA	NA	gi|971581851|ref|XP_015159589.1|//PREDICTED: uncharacterized protein LOC107058417 [Solanum tuberosum]
Solyc11g065840.2.1	1539	6.66646591025723	1.45972797595155	-2.19122260473535	0.0289212167831315	Down	0.00642579803759755	NA	NA	NA	K09422//myb proto-oncogene protein, plant	gi|460411949|ref|XP_004251366.1|//PREDICTED: transcription factor MYB46 [Solanum lycopersicum]
Solyc02g078560.3.1	3410	1428.12884878158	681.830083344945	-1.06664198839371	1.14970553462138e-16	Down	7.82907079633067e-19	NA	NA	NA	NA	gi|460374091|ref|XP_004232845.1|//PREDICTED: uncharacterized protein LOC101266688 [Solanum lycopersicum]
Solyc06g051630.4.1	1889	395.175167971773	192.413685270541	-1.03828088036348	0.00231213612674857	Down	0.000304283377402803	NA	GO:0004629//phospholipase C activity	GO:0007165//signal transduction	K05857//phosphatidylinositol phospholipase C, delta [EC:3.1.4.11]	gi|914100381|ref|NP_001234176.2|//PI-phospholipase C PLC5 [Solanum lycopersicum]
Solyc03g117270.1.1	1272	673.06927813842	227.238393680223	-1.56654839728999	0.00026160638501087	Down	2.33654461255006e-05	NA	NA	NA	K01889//phenylalanyl-tRNA synthetase alpha chain [EC:6.1.1.20]	gi|460380343|ref|XP_004235916.1|//PREDICTED: F-box protein At5g07610-like [Solanum lycopersicum]
Solyc05g006420.3.1	1461	93.0657180359919	295.617144132196	1.66740820478313	0.0008900432714115	Up	9.78779714949516e-05	NA	GO:0004871//signal transducer activity	GO:0007165//signal transduction;GO:0006351//transcription, DNA-templated	K14492//two-component response regulator ARR-A family	gi|970414587|ref|NP_001305076.1|//two-component response regulator ARR5 [Solanum lycopersicum]
Solyc11g005740.2.1	2236	24.0532621263187	7.5234140760367	-1.67677316577198	0.0178513111463308	Down	0.00356824740859502	NA	NA	NA	K13172//serine/arginine repetitive matrix protein 2	gi|723740505|ref|XP_010312473.1|//PREDICTED: uncharacterized protein LOC101263371 isoform X3 [Solanum lycopersicum]
Solyc09g010660.3.1	1009	283.238152990363	98.9577373320167	-1.51713119507267	2.06692696331512e-05	Down	1.26130757505535e-06	NA	NA	NA	K20891;K00771//protein xylosyltransferase [EC:2.4.2.26]	gi|460401855|ref|XP_004246431.1|//PREDICTED: xylosyltransferase 2 [Solanum lycopersicum]
Solyc06g066620.3.1	1649	1725.08746686295	3729.66494393663	1.11237651866326	1.97250019737719e-08	Up	5.57316647189718e-10	NA	NA	NA	NA	gi|460392260|ref|XP_004241735.1|//PREDICTED: protein CURVATURE THYLAKOID 1C, chloroplastic [Solanum lycopersicum]
Solyc06g035580.3.1	1987	80.1015164930285	13.0182500386353	-2.62129402706672	0.00171955071148095	Down	0.000213358850506553	NA	GO:0003824//catalytic activity	NA	K15403//fatty acid omega-hydroxy dehydrogenase [EC:1.1.-.-];K00108//choline dehydrogenase [EC:1.1.99.1]	gi|955471894|ref|NP_001304261.1|//protein HOTHEAD precursor [Solanum lycopersicum]
Solyc02g082910.3.1	2105	434.275348005123	89.8370657645489	-2.27322734667243	2.2471974392735e-13	Down	2.43488661591711e-15	NA	NA	NA	K00666//fatty-acyl-CoA synthase [EC:6.2.1.-];K01904//4-coumarate--CoA ligase [EC:6.2.1.12]	gi|460373485|ref|XP_004232549.1|//PREDICTED: probable acyl-activating enzyme 1, peroxisomal [Solanum lycopersicum]
Solyc12g096670.2.1	2535	1533.86007436512	662.838406382696	-1.21043777652946	0.00215041341422891	Down	0.000279440479034863	NA	NA	NA	K15502//serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A	gi|460415383|ref|XP_004253038.1|//PREDICTED: ankyrin repeat-containing protein At5g02620 [Solanum lycopersicum]
Solyc01g108990.3.1	1168	12.122590109358	47.1598233156036	1.95986033568551	0.00523704658758392	Up	0.000812747072000891	NA	NA	NA	K17925//sorting nexin-13	gi|723666930|ref|XP_010315502.1|//PREDICTED: putative B3 domain-containing protein Os03g0621600 [Solanum lycopersicum]
Solyc01g006360.3.1	6207	650.129461979006	249.534350946024	-1.38148860347712	0.000374209833802157	Down	3.55907622216649e-05	NA	NA	NA	K11000//callose synthase [EC:2.4.1.-]	gi|723655809|ref|XP_010315995.1|//PREDICTED: callose synthase 9 [Solanum lycopersicum];gi|697108788|ref|XP_009608251.1|//PREDICTED: callose synthase 9 [Nicotiana tomentosiformis]
Solyc05g012680.3.1	1067	27.9315141785512	57.9665880115274	1.05332778439947	0.0436932706471782	Up	0.0108361841593463	NA	NA	NA	NA	gi|460386798|ref|XP_004239083.1|//PREDICTED: uncharacterized protein At5g01610 [Solanum lycopersicum]
Solyc02g086645.1.1	1571	126.603867125965	316.244167207867	1.32071739837186	0.0050147947225136	Up	0.000771844781444411	NA	GO:0016426//tRNA (adenine) methyltransferase activity	GO:0001510//RNA methylation	K07442//tRNA (adenine57-N1/adenine58-N1)-methyltransferase [EC:2.1.1.219 2.1.1.220]	gi|723671747|ref|XP_010316290.1|//PREDICTED: tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A [Solanum lycopersicum]
Solyc09g005670.2.1	1822	63.505578943826	21.3269998229132	-1.57420230899444	0.00733045458828536	Down	0.00121879814922204	NA	NA	NA	K20279//synaptojanin [EC:3.1.3.36];K01099//inositol polyphosphate 5-phosphatase INPP5B/F [EC:3.1.3.36];K05658//ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:3.6.3.44]	gi|723728686|ref|XP_010326053.1|//PREDICTED: type I inositol 1,4,5-trisphosphate 5-phosphatase CVP2 isoform X3 [Solanum lycopersicum];gi|460402868|ref|XP_004246932.1|//PREDICTED: uncharacterized protein LOC101250543 [Solanum lycopersicum]
Solyc10g080880.2.1	2444	98.7016785065941	198.58285175363	1.00859452277687	0.0143128186988557	Up	0.00270963520288344	GO:0031224//intrinsic component of membrane	NA	GO:0006810//transport	K13947//auxin efflux carrier family	gi|350535621|ref|NP_001234204.1|//auxin efflux facilitator SlPIN7 [Solanum lycopersicum]
Solyc01g111350.3.1	1928	2386.4492925025	921.845217116942	-1.37226924252908	0.000640781860344394	Down	6.66335990215164e-05	NA	NA	NA	K14794//ribosomal RNA-processing protein 12	gi|460370369|ref|XP_004231025.1|//PREDICTED: uncharacterized protein LOC101261467 [Solanum lycopersicum]
Solyc04g015020.3.1	1339	9608.87515298004	2881.29718937532	-1.73764908024379	3.39402657388967e-13	Down	3.86903706504353e-15	NA	NA	NA	NA	gi|460381854|ref|XP_004236656.1|//PREDICTED: neurofilament heavy polypeptide [Solanum lycopersicum]
Solyc05g015850.3.1	783	1990.14482772873	691.526595664707	-1.52501678038026	6.11025157745297e-16	Down	4.39073758951662e-18	NA	GO:0003677//DNA binding;GO:0001071//nucleic acid binding transcription factor activity	GO:0010467//gene expression	K18835//WRKY transcription factor 2	gi|460387126|ref|XP_004239240.1|//PREDICTED: probable WRKY transcription factor 75 [Solanum lycopersicum]
BGI_novel_G000044	814	62.2553127649416	182.871959297218	1.55456501141267	0.0253042704740734	Up	0.00545498381551695	NA	NA	NA	K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6];K06228//fused [EC:2.7.11.1];K16570//gamma-tubulin complex component 3;K03549//KUP system potassium uptake protein	gi|548837929|gb|ERM98543.1|//hypothetical protein AMTR_s04311p00004950, partial [Amborella trichopoda]
Solyc12g056960.2.1	1809	853.284454304971	417.720600640625	-1.03048846994336	5.73030177287731e-05	Down	4.06381446270644e-06	NA	GO:0043167//ion binding;GO:0016798//hydrolase activity, acting on glycosyl bonds	GO:0044238//primary metabolic process	NA	gi|723751749|ref|XP_004252539.2|//PREDICTED: probable glucan 1,3-beta-glucosidase A [Solanum lycopersicum]
BGI_novel_G000416	4829	105.291781544418	18.9440711378492	-2.47457452375043	0.00790180899735645	Down	0.00133391335482086	NA	NA	NA	K17604//zinc finger SWIM domain-containing protein 3;K03549//KUP system potassium uptake protein;K14808//ATP-dependent RNA helicase DDX54/DBP10 [EC:3.6.4.13]	gi|970034293|ref|XP_015078464.1|//PREDICTED: uncharacterized protein LOC107022340 [Solanum pennellii]
Solyc10g006370.3.1	769	524.460994352459	1224.69763575218	1.22351822320885	3.00955485445253e-12	Up	4.07614652973254e-14	NA	NA	NA	NA	gi|723734731|ref|XP_010327169.1|//PREDICTED: protein LHCP TRANSLOCATION DEFECT [Solanum lycopersicum]
Solyc09g005920.3.1	2628	1310.10469570824	509.546336993801	-1.36239685500278	1.55338191615275e-07	Down	5.30651158715836e-09	NA	NA	NA	NA	gi|460402466|ref|XP_004246733.1|//PREDICTED: protein GPR107 [Solanum lycopersicum]
Solyc07g054720.2.1	1099	30.8863827819638	85.077192074666	1.46180149720903	0.0370093226753339	Up	0.00879145460391491	NA	NA	NA	NA	gi|970040783|ref|XP_015081786.1|//PREDICTED: proteinase inhibitor PSI-1.2-like [Solanum pennellii]
Solyc08g006310.3.1	2656	207.839665676022	94.632592801862	-1.13506195641158	7.1963104518284e-06	Down	3.83099296062347e-07	NA	GO:0016740//transferase activity	NA	K20887	gi|460397858|ref|XP_004244483.1|//PREDICTED: probable xyloglucan glycosyltransferase 5 [Solanum lycopersicum]
Solyc02g077350.1.1	282	9.57180075192159	1.22486430419353	-2.96616843579137	0.00155874569601023	Down	0.000189829188035558	NA	NA	NA	NA	gi|460377468|ref|XP_004234515.1|//PREDICTED: uncharacterized protein LOC101265314 isoform X1 [Solanum lycopersicum]
Solyc04g040180.3.1	1179	15027.7440365745	5771.77722266989	-1.38054092696939	4.9361508218182e-09	Down	1.23496625150831e-10	NA	GO:0016741//transferase activity, transferring one-carbon groups	GO:0006730//one-carbon metabolic process	K08869//aarF domain-containing kinase	gi|460383231|ref|XP_004237334.1|//PREDICTED: putative methyltransferase DDB_G0268948 [Solanum lycopersicum]
Solyc03g121920.3.1	2044	1064.26553385606	530.839789875098	-1.00350972843146	0.00099007101768255	Down	0.000110961955538851	GO:0016020//membrane	NA	NA	K15121//solute carrier family 25, member 44	gi|723684859|ref|XP_010318490.1|//PREDICTED: solute carrier family 25 member 44 [Solanum lycopersicum]
Solyc04g005070.3.1	1722	150.62891117699	43.7867105271357	-1.78243372570454	0.0375380703763538	Down	0.00894812693395703	NA	NA	NA	K14638//solute carrier family 15 (peptide/histidine transporter), member 3/4	gi|460382704|ref|XP_004237077.1|//PREDICTED: protein NRT1/ PTR FAMILY 1.2-like [Solanum lycopersicum]
Solyc01g100440.2.1	2255	91.0645598433374	35.4600124742674	-1.36069665696796	0.00245330213876121	Down	0.000326091665020442	NA	NA	NA	NA	gi|723663144|ref|XP_010313497.1|//PREDICTED: uncharacterized protein LOC104644784 isoform X1 [Solanum lycopersicum]
Solyc01g097830.2.1	1267	9.2464939043611	47.8509709434675	2.37156986696466	0.000376124599946418	Up	3.58436272258945e-05	NA	NA	NA	K10406//kinesin family member C2/C3	gi|723662160|ref|XP_010312141.1|//PREDICTED: uncharacterized protein LOC104644367 [Solanum lycopersicum]
Solyc01g104900.3.1	984	21.5734012926889	6.71329699481273	-1.68416027829744	0.0366386686265294	Down	0.00867331399591106	NA	NA	NA	K13126//polyadenylate-binding protein;K05941//glutathione gamma-glutamylcysteinyltransferase [EC:2.3.2.15];K01054//acylglycerol lipase [EC:3.1.1.23]	gi|460369580|ref|XP_004230640.1|//PREDICTED: NAC transcription factor 25 [Solanum lycopersicum]
Solyc12g042580.2.1	696	73.0762245720498	20.4518896562971	-1.83716795272853	0.0461399366692685	Down	0.0116269862983732	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6]	gi|460413876|ref|XP_004252302.1|//PREDICTED: lamin-like protein [Solanum lycopersicum]
Solyc11g042460.2.1	3512	469.484887173008	152.262906444564	-1.62451419572354	8.7283209314264e-06	Down	4.77791834282371e-07	GO:0031224//intrinsic component of membrane	GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds	GO:0006678//glucosylceramide metabolic process	K17108//non-lysosomal glucosylceramidase [EC:3.2.1.45]	gi|723743841|ref|XP_010313056.1|//PREDICTED: LOW QUALITY PROTEIN: non-lysosomal glucosylceramidase [Solanum lycopersicum];gi|970059509|ref|XP_015056499.1|//PREDICTED: non-lysosomal glucosylceramidase [Solanum pennellii]
Solyc10g005360.3.1	1331	217.104035793628	83.0344174923603	-1.38660518689226	0.0144842022576511	Down	0.00274589522860436	NA	GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K04125//gibberellin 2-oxidase [EC:1.14.11.13]	gi|723735055|ref|XP_004248394.2|//PREDICTED: gibberellin 2-beta-dioxygenase 8 [Solanum lycopersicum]
Solyc03g118750.3.1	2216	303.420454071855	89.299011055743	-1.76460223992543	1.95247138979955e-10	Down	3.73893129197883e-12	NA	GO:0000234//phosphoethanolamine N-methyltransferase activity;GO:0008170//N-methyltransferase activity	GO:0006730//one-carbon metabolic process;GO:0032259//methylation;GO:0006656//phosphatidylcholine biosynthetic process	K05929//phosphoethanolamine N-methyltransferase [EC:2.1.1.103]	gi|1000941406|ref|XP_015582654.1|//PREDICTED: phosphomethylethanolamine N-methyltransferase isoform X1 [Ricinus communis];gi|350537433|ref|NP_001234549.1|//phosphoethanolamine N-methyltransferase [Solanum lycopersicum];gi|702260446|ref|XP_010033717.1|//PREDICTED: phosphoethanolamine N-methyltransferase 1 [Eucalyptus grandis]
Solyc11g012270.2.1	1381	260.089097357803	127.019710572197	-1.03395353654597	0.0102285433959796	Down	0.00181597051488442	GO:0044424//intracellular part	GO:0005092//GDP-dissociation inhibitor activity	NA	K12462//Rho GDP-dissociation inhibitor	gi|460409678|ref|XP_004250265.1|//PREDICTED: rho GDP-dissociation inhibitor 1-like [Solanum lycopersicum]
Solyc02g080610.3.1	604	34.6271140624947	104.15769590228	1.58879538105013	0.000405511153686659	Up	3.90407465118194e-05	NA	NA	NA	NA	gi|723673859|ref|XP_010316589.1|//PREDICTED: uncharacterized protein LOC101252247 [Solanum lycopersicum]
Solyc07g063490.3.1	2322	29.8106781528661	73.8113382125013	1.30801325165075	0.00265946636350602	Up	0.000359998494202207	NA	NA	NA	NA	gi|460397283|ref|XP_004244197.1|//PREDICTED: uncharacterized protein LOC101245970 [Solanum lycopersicum]
Solyc01g098040.3.1	1700	669.434791252643	293.394034797749	-1.19010399254672	4.33828802740643e-09	Down	1.06906646273559e-10	NA	GO:0016741//transferase activity, transferring one-carbon groups	GO:0006730//one-carbon metabolic process	NA	gi|460368565|ref|XP_004230136.1|//PREDICTED: uncharacterized protein LOC101248142 [Solanum lycopersicum]
Solyc03g118740.3.1	2626	122.086274005118	33.7860731212995	-1.85340042500428	0.00564018165069094	Down	0.000890164109279477	GO:0031224//intrinsic component of membrane	NA	GO:0006810//transport	K13947//auxin efflux carrier family	gi|350534856|ref|NP_001234163.1|//auxin efflux facilitator SlPIN1 [Solanum lycopersicum]
Solyc01g009700.2.1	2811	1439.11297088905	3704.05578081427	1.36392597626011	4.04648693734328e-14	Up	3.82117464737834e-16	GO:0016021//integral component of membrane	NA	NA	K10406//kinesin family member C2/C3	gi|723654952|ref|XP_010326133.1|//PREDICTED: receptor-like protein 12 isoform X2 [Solanum lycopersicum];gi|970001077|ref|XP_015056491.1|//PREDICTED: receptor-like protein 12 isoform X1 [Solanum pennellii]
Solyc04g076510.3.1	5516	905.965359590736	415.806023802954	-1.12354522982554	0.00289450065666386	Down	0.000400090120864673	NA	NA	NA	K18953//factor associated with neutral sphingomyelinase activation	gi|723694684|ref|XP_010320220.1|//PREDICTED: BEACH domain-containing protein lvsC isoform X3 [Solanum lycopersicum]
Solyc09g072800.3.1	1691	331.314341466185	95.1748183155745	-1.79954883824795	1.69712316543352e-06	Down	7.44486685814705e-08	NA	NA	NA	NA	gi|460404058|ref|XP_004247502.1|//PREDICTED: uncharacterized protein LOC101246864 [Solanum lycopersicum]
Solyc05g053000.1.1	942	246.933333688678	50.2226667709783	-2.29771105860221	4.8417241990209e-15	Down	3.91636833254136e-17	NA	NA	NA	NA	gi|460388508|ref|XP_004239909.1|//PREDICTED: putative DNA-binding protein ESCAROLA [Solanum lycopersicum]
Solyc10g086730.2.1	1912	1182.86250042682	2469.95320883242	1.06220133131782	3.72929547659005e-07	Up	1.37638783391077e-08	NA	NA	NA	K03841//fructose-1,6-bisphosphatase I [EC:3.1.3.11]	gi|460408392|ref|XP_004249629.1|//PREDICTED: fructose-1,6-bisphosphatase, chloroplastic [Solanum lycopersicum]
Solyc03g025640.2.1	3827	151.718934154221	17.6414813602401	-3.10435752704484	1.17895989046057e-14	Down	1.03791051304655e-16	NA	GO:0005506//iron ion binding;GO:0016491//oxidoreductase activity	NA	K07426//cytochrome P450, family 4, subfamily B, polypeptide 1 [EC:1.14.14.1];K20661;K20660//null	gi|723679660|ref|XP_010317607.1|//PREDICTED: cytokinin hydroxylase [Solanum lycopersicum]
Solyc04g080420.3.1	1323	59.8937183227863	137.165273599369	1.1954386721868	0.040364243800716	Up	0.00978430484605016	NA	NA	NA	K03695//ATP-dependent Clp protease ATP-binding subunit ClpB;K04506//E3 ubiquitin-protein ligase SIAH1 [EC:2.3.2.27]	gi|723695773|ref|XP_010320393.1|//PREDICTED: jacalin-related lectin 3-like [Solanum lycopersicum]
Solyc01g066730.3.1	2628	1.25315252709868	9.59088761048378	2.93610231635425	0.00180434431840371	Up	0.000225848515700871	NA	NA	NA	K12412//pheromone receptor transcription factor	gi|723658235|ref|XP_010321380.1|//PREDICTED: fibrinogen alpha-1 chain-like [Solanum lycopersicum]
Solyc09g097910.3.1	1638	298.110126607725	712.614372281937	1.25727619701886	6.03218899681867e-07	Up	2.34433831215714e-08	NA	GO:0003676//nucleic acid binding	NA	K02945//small subunit ribosomal protein S1	gi|460405109|ref|XP_004248019.1|//PREDICTED: uncharacterized protein LOC101267163 isoform X1 [Solanum lycopersicum]
Solyc01g068490.3.1	2946	461.377596437345	1346.16038457444	1.54483044963698	3.47027184943967e-11	Up	5.6271150004082e-13	NA	NA	NA	K08332//vacuolar protein 8	gi|723657750|ref|XP_004229286.2|//PREDICTED: U-box domain-containing protein 44-like [Solanum lycopersicum]
Solyc09g007340.3.1	2423	161.318633995587	63.266505910681	-1.35039926868985	3.32654490318649e-07	Down	1.21647917452869e-08	NA	NA	NA	K17398//DNA (cytosine-5)-methyltransferase 3A [EC:2.1.1.37]	gi|460402388|ref|XP_004246694.1|//PREDICTED: uncharacterized protein LOC101257296 [Solanum lycopersicum]
Solyc10g084530.1.1	276	29.0206152966789	8.06907833545615	-1.84660230700739	0.0030961185066465	Down	0.000433549777341545	NA	NA	NA	NA	gi|460408163|ref|XP_004249516.1|//PREDICTED: protein GPR107-like [Solanum lycopersicum]
Solyc09g091670.3.1	4620	2320.66792948141	770.798755915428	-1.59011395018807	3.18459139598705e-20	Down	1.44971993572021e-22	GO:0031224//intrinsic component of membrane	GO:0032559//adenyl ribonucleotide binding;GO:0017111//nucleoside-triphosphatase activity	GO:0006950//response to stress;GO:0051234//establishment of localization;GO:0009207//purine ribonucleoside triphosphate catabolic process	K05681//ATP-binding cassette, subfamily G (WHITE), member 2	gi|460404747|ref|XP_004247842.1|//PREDICTED: pleiotropic drug resistance protein 1 [Solanum lycopersicum]
Solyc10g007360.3.1	1789	39.2239153589213	86.3737449279005	1.13885928870997	0.0209027587110768	Up	0.00432131900366316	NA	NA	NA	K03327//multidrug resistance protein, MATE family	gi|460405547|ref|XP_004248237.1|//PREDICTED: MATE efflux family protein LAL5-like [Solanum lycopersicum];gi|147858860|emb|CAN78689.1|//hypothetical protein VITISV_039558 [Vitis vinifera];gi|460406069|ref|XP_004248496.1|//PREDICTED: MATE efflux family protein LAL5-like [Solanum lycopersicum]
Solyc02g088345.1.1	1517	2392.59989175894	771.637540641801	-1.63258392070715	1.32530944001918e-06	Down	5.66921306735068e-08	NA	NA	NA	K08819//cyclin-dependent kinase 12/13 [EC:2.7.11.22 2.7.11.23];K13424//WRKY transcription factor 33	gi|460372768|ref|XP_004232197.1|//PREDICTED: probable WRKY transcription factor 3 [Solanum lycopersicum]
Solyc01g105780.3.1	2239	588.335994867406	215.182277700734	-1.45108104100744	9.63517493953055e-07	Down	3.92584441667103e-08	NA	NA	NA	K09518//DnaJ homolog subfamily B member 12;K09510//DnaJ homolog subfamily B member 4;K09511	gi|460369422|ref|XP_004230561.1|//PREDICTED: uncharacterized protein LOC101249308 [Solanum lycopersicum]
Solyc09g007310.3.1	8539	183.099567207947	452.156837298161	1.30419489855536	7.97361821854777e-13	Up	9.77953175036333e-15	GO:0005634//nucleus;GO:0005737//cytoplasm	GO:0004842//ubiquitin-protein transferase activity;GO:0016874//ligase activity	GO:0042787//protein ubiquitination involved in ubiquitin-dependent protein catabolic process	K10590//E3 ubiquitin-protein ligase TRIP12 [EC:2.3.2.26]	gi|460402392|ref|XP_004246696.1|//PREDICTED: E3 ubiquitin-protein ligase UPL4 [Solanum lycopersicum]
Solyc10g047040.3.1	1827	115.120865389568	234.271157866106	1.02503000642091	0.00563432716646551	Up	0.000889028146582256	NA	NA	NA	K18753//butyrate response factor 1;K15308//tristetraprolin	gi|460406720|ref|XP_004248809.1|//PREDICTED: zinc finger protein 36, C3H1 type-like 1 [Solanum lycopersicum]
Solyc07g043310.3.1	2199	17397.4376779014	7295.85425549497	-1.25372602418702	1.08355068314794e-07	Down	3.57106997154853e-09	NA	GO:0008483//transaminase activity;GO:0048037//cofactor binding	NA	K16871//4-aminobutyrate---pyruvate transaminase [EC:2.6.1.96]	gi|894216246|ref|NP_001234336.2|//gamma aminobutyrate transaminase 1, mitochondrial [Solanum lycopersicum];gi|971569389|ref|XP_015169135.1|//PREDICTED: gamma aminobutyrate transaminase 1, mitochondrial isoform X2 [Solanum tuberosum]
Solyc03g123430.3.1	1290	22.9231471083835	1.45854145079034	-3.97420683225761	3.54721385622467e-06	Down	1.69753800794499e-07	NA	NA	NA	K09285//AP2-like factor, ANT lineage	gi|723684729|ref|XP_010318466.1|//PREDICTED: AP2-like ethylene-responsive transcription factor AIL1 isoform X1 [Solanum lycopersicum]
Solyc09g066080.2.1	3727	115.494183901353	241.294103894777	1.06297246152763	2.68205292220388e-06	Up	1.24314868327885e-07	NA	NA	NA	K10683//BRCA1-associated RING domain protein 1	gi|723731085|ref|XP_004247224.2|//PREDICTED: protein BREAST CANCER SUSCEPTIBILITY 1 homolog [Solanum lycopersicum]
Solyc11g066800.2.1	1985	444.52791203589	142.411688237569	-1.64220645082179	4.42879984643769e-06	Down	2.18940669609448e-07	GO:0031224//intrinsic component of membrane	NA	NA	K14209//solute carrier family 36 (proton-coupled amino acid transporter);K15015//solute carrier family 32 (vesicular inhibitory amino acid transporter)	gi|460411213|ref|XP_004251008.1|//PREDICTED: GABA transporter 1 [Solanum lycopersicum]
Solyc08g082820.3.1	2472	20684.0199159776	3546.339112842	-2.54411419577447	2.19150448095445e-24	Down	5.85390587463379e-27	GO:0044432//endoplasmic reticulum part	GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	GO:0008152//metabolic process;GO:0050896//response to stimulus	K09490//heat shock 70kDa protein 5	gi|910242123|ref|NP_001234636.2|//luminal-binding protein precursor [Solanum lycopersicum];gi|698515700|ref|XP_009802727.1|//PREDICTED: luminal-binding protein [Nicotiana sylvestris]
Solyc08g081380.3.1	3420	168.637222636144	67.967884782432	-1.31099788112979	0.000900452623215644	Down	9.92598264116568e-05	NA	NA	NA	NA	gi|460400109|ref|XP_004245578.1|//PREDICTED: BTB/POZ domain-containing protein At1g63850 [Solanum lycopersicum]
Solyc05g009360.3.1	1854	4821.08891282883	10006.8140273559	1.05355177960642	7.05120101455199e-07	Up	2.78811597678485e-08	NA	NA	NA	NA	gi|460386488|ref|XP_004238930.1|//PREDICTED: uncharacterized protein LOC101254996 [Solanum lycopersicum]
Solyc01g068380.3.1	2233	72.5792565706187	154.358055593611	1.08865159139059	0.000927821622505859	Up	0.000102994075181204	NA	NA	NA	K14407//cleavage stimulation factor subunit 2	gi|723657781|ref|XP_004229163.2|//PREDICTED: nucleotide pyrophosphatase/phosphodiesterase-like [Solanum lycopersicum]
Solyc06g076170.3.1	3326	231.116932898613	45.4662834113046	-2.34575398087817	6.64206033953467e-12	Down	9.4708083848143e-14	NA	GO:0008422//beta-glucosidase activity;GO:0043167//ion binding	GO:0044238//primary metabolic process	K20617;K00512//steroid 17alpha-monooxygenase / 17alpha-hydroxyprogesterone aldolase [EC:1.14.14.19 4.1.2.30];K19891//glucan endo-1,3-beta-glucosidase 1/2/3 [EC:3.2.1.39]	gi|460391228|ref|XP_004241225.1|//PREDICTED: glucan endo-1,3-beta-glucosidase-like [Solanum lycopersicum];gi|460391230|ref|XP_004241226.1|//PREDICTED: cytochrome P450 71A9-like [Solanum lycopersicum]
Solyc03g120830.3.1	1897	10.6381513734488	37.6138095595622	1.82201496043776	0.00236769060022355	Up	0.00031319789881061	NA	NA	NA	NA	gi|460379818|ref|XP_004235657.1|//PREDICTED: uncharacterized protein LOC101259623 [Solanum lycopersicum]
Solyc11g072930.2.1	4819	1098.51525739007	505.731173349663	-1.11911229336877	2.21154366291379e-05	Down	1.370358319345e-06	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460412127|ref|XP_004251454.1|//PREDICTED: putative leucine-rich repeat receptor-like protein kinase At2g19210 [Solanum lycopersicum]
Solyc04g072940.3.1	799	40.7157303917442	15.6719015439256	-1.37740604352984	0.0155050283311699	Down	0.00299075546478209	NA	NA	NA	NA	gi|460384395|ref|XP_004237897.1|//PREDICTED: nucleolar transcription factor 1 [Solanum lycopersicum]
Solyc05g013460.3.1	1976	210.840813922934	528.37334419937	1.3254035196652	0.00374939170915527	Up	0.000547174207667919	NA	NA	NA	K03327//multidrug resistance protein, MATE family	gi|460386888|ref|XP_004239126.1|//PREDICTED: protein TRANSPARENT TESTA 12-like [Solanum lycopersicum]
Solyc03g117640.1.1	1218	412.420317782626	148.240731792998	-1.47617350007802	1.02846819951286e-12	Down	1.2884872476967e-14	NA	NA	NA	K20716	gi|460380290|ref|XP_004235890.1|//PREDICTED: mitogen-activated protein kinase kinase kinase YODA-like [Solanum lycopersicum]
Solyc01g008140.3.1	3042	2164.22743950696	1041.98186619812	-1.0545219501692	3.10240679760342e-07	Down	1.12751127407258e-08	GO:0016020//membrane	GO:0000166//nucleotide binding;GO:0004672//protein kinase activity;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K13415//protein brassinosteroid insensitive 1 [EC:2.7.10.1 2.7.11.1]	gi|460365292|ref|XP_004228537.1|//PREDICTED: phytosulfokine receptor 1 [Solanum lycopersicum]
Solyc02g087680.1.1	1560	9.34308610053388	68.4363260419863	2.87279124362847	7.85738699379963e-07	Up	3.13645131693808e-08	NA	NA	NA	K09272//structure-specific recognition protein 1	gi|970007947|ref|XP_015064895.1|//PREDICTED: FACT complex subunit SSRP1-like [Solanum pennellii]
Solyc12g042110.2.1	791	98.5581319807673	210.391678187595	1.09403082421836	0.000857462132822624	Up	9.36175737190088e-05	NA	NA	NA	K07466//replication factor A1;K12819//pre-mRNA-processing factor SLU7;K17790//mitochondrial import inner membrane translocase subunit TIM22	gi|970045593|ref|XP_015084256.1|//PREDICTED: uncharacterized protein LOC107027670 [Solanum pennellii];gi|723750607|ref|XP_010314233.1|//PREDICTED: uncharacterized protein LOC101250282 [Solanum lycopersicum];gi|971587613|ref|XP_015161150.1|//PREDICTED: replication protein A 70 kDa DNA-binding subunit D-like [Solanum tuberosum]
Solyc11g065990.2.1	1389	94.1348281961186	28.5552590444276	-1.72097212064645	0.000431568119992011	Down	4.19390689969663e-05	GO:0043232//intracellular non-membrane-bounded organelle	GO:0032559//adenyl ribonucleotide binding	NA	K10355//actin, other eukaryote	gi|460411105|ref|XP_004250955.1|//PREDICTED: actin-97-like [Solanum lycopersicum]
Solyc03g113670.3.1	618	80.6091605337422	210.429787577384	1.38432323808401	9.94286738056925e-05	Up	7.60865020770423e-06	NA	NA	NA	NA	gi|595851982|ref|XP_007210222.1|//hypothetical protein PRUPE_ppa015613mg, partial [Prunus persica]
Solyc05g006323.1.1	1341	132.339086457269	1.6000951988238	-6.36993767363355	4.46952004648683e-20	Down	2.06828805762935e-22	NA	NA	NA	K18756//protein bicaudal C	gi|460386064|ref|XP_004238720.1|//PREDICTED: uncharacterized protein LOC101267602 [Solanum lycopersicum]
Solyc04g064860.1.1	702	223.474906378334	60.6644048457304	-1.88119068165831	2.61528614696432e-13	Down	2.89275442892216e-15	NA	NA	NA	K12412//pheromone receptor transcription factor;K09260//MADS-box transcription enhancer factor 2A;K04454//MADS-box transcription enhancer factor 2C	gi|460384122|ref|XP_004237763.1|//PREDICTED: agamous-like MADS-box protein AGL62 [Solanum lycopersicum]
Solyc01g009870.3.1	1706	111.43679255107	459.02596762679	2.04235013183743	1.27562703214171e-06	Up	5.41829540740404e-08	NA	NA	NA	K18696//glycerophosphodiester phosphodiesterase [EC:3.1.4.46]	gi|460365079|ref|XP_004228433.1|//PREDICTED: glycerophosphodiester phosphodiesterase GDPD3-like isoform X1 [Solanum lycopersicum]
Solyc12g042890.2.1	1213	164.833562725273	666.915731655061	2.0164944527419	0.00110792006202918	Up	0.000126756392348786	NA	GO:0003824//catalytic activity	NA	K06130//lysophospholipase II [EC:3.1.1.5]	gi|460413914|ref|XP_004252320.1|//PREDICTED: acyl-protein thioesterase 2-like [Solanum lycopersicum]
Solyc05g006830.3.1	2046	202.074741469963	517.616574881363	1.3569948134825	0.000352006527675206	Up	3.30155106656993e-05	NA	NA	NA	K03671//thioredoxin 1	gi|460386125|ref|XP_004238750.1|//PREDICTED: thioredoxin H2-like [Solanum lycopersicum]
Solyc03g013240.3.1	1696	125.928124733553	274.486676607745	1.12413559357941	0.000814448604869692	Up	8.80021216397951e-05	NA	NA	NA	K10755//replication factor C subunit 2/4	gi|460377016|ref|XP_004234292.1|//PREDICTED: uncharacterized protein LOC101263285 [Solanum lycopersicum]
Solyc01g007070.3.1	3015	7246.92892499864	3195.9908363063	-1.18110647330249	4.69683167534099e-07	Down	1.77765713521183e-08	GO:0005634//nucleus;GO:0005737//cytoplasm	GO:0003677//DNA binding;GO:0046982//protein heterodimerization activity;GO:0042803//protein homodimerization activity	GO:0006355//regulation of transcription, DNA-templated;GO:0010197//polar nucleus fusion;GO:0010201//response to continuous far red light stimulus by the high-irradiance response system	K16670//homeobox protein Meis2;K15613//homeobox protein Meis1	gi|460365445|ref|XP_004228612.1|//PREDICTED: BEL1-like homeodomain protein 1 [Solanum lycopersicum]
Solyc11g040330.2.1	1962	107.724481796303	48.1745587644478	-1.16100280053896	0.000786440578303719	Down	8.44136557524647e-05	NA	NA	NA	K01181//endo-1,4-beta-xylanase [EC:3.2.1.8]	gi|460410588|ref|XP_004250707.1|//PREDICTED: uncharacterized protein LOC101263970 isoform X1 [Solanum lycopersicum]
BGI_novel_G000296	628	32.8888876582643	8.51792538435905	-1.9490262180347	0.00584330239532596	Down	0.000928377201484632	NA	NA	NA	K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6];K03549//KUP system potassium uptake protein;K12447//UDP-sugar pyrophosphorylase [EC:2.7.7.64];K05658//ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:3.6.3.44]	gi|147773621|emb|CAN74198.1|//hypothetical protein VITISV_005765 [Vitis vinifera]
Solyc05g012060.3.1	5047	59.5124154316751	27.4003535808351	-1.1189961634907	0.0408750342341301	Down	0.00993580121093733	NA	NA	NA	NA	gi|460387586|ref|XP_004239457.1|//PREDICTED: uncharacterized protein LOC101261411 isoform X1 [Solanum lycopersicum]
Solyc02g071710.2.1	1631	88.0183275108371	202.384170191057	1.20122058810278	0.0158837869854412	Up	0.00307935117893072	NA	NA	NA	K21026;K17604//zinc finger SWIM domain-containing protein 3;K01188//beta-glucosidase [EC:3.2.1.21];K00679//phospholipid:diacylglycerol acyltransferase [EC:2.3.1.158];K10960//geranylgeranyl reductase [EC:1.3.1.83]	gi|460374417|ref|XP_004233007.1|//PREDICTED: GDSL esterase/lipase At1g29670-like [Solanum lycopersicum]
Solyc11g064790.2.1	1434	3039.22819556506	1383.57885740054	-1.13530012833331	6.41234961956338e-10	Down	1.34857164685325e-11	GO:0031224//intrinsic component of membrane	GO:0004175//endopeptidase activity	NA	K09595//minor histocompatibility antigen H13 [EC:3.4.23.-]	gi|460410973|ref|XP_004250889.1|//PREDICTED: signal peptide peptidase-like [Solanum lycopersicum]
Solyc04g018080.3.1	2787	957.197943613616	475.560285709422	-1.00918905759135	0.000262062734519516	Down	2.34357832939387e-05	NA	NA	NA	K14972//PAX-interacting protein 1	gi|565383634|ref|XP_006358039.1|//PREDICTED: mediator of RNA polymerase II transcription subunit 15a-like [Solanum tuberosum]
Solyc04g051880.2.1	2891	167.054696353011	32.1449872827115	-2.37765485616255	2.02884397073186e-08	Down	5.73999498115261e-10	NA	NA	NA	K15032//mTERF domain-containing protein, mitochondrial	gi|723693146|ref|XP_010319917.1|//PREDICTED: uncharacterized protein LOC104647052 [Solanum lycopersicum]
Solyc09g082505.1.1	2976	647.798268955051	232.577441458252	-1.47783344167512	0.021872975546878	Down	0.00457538540408736	NA	NA	NA	K14963//COMPASS component SWD3	gi|723731991|ref|XP_010326688.1|//PREDICTED: protein tesmin/TSO1-like CXC 2 isoform X2 [Solanum lycopersicum];gi|970053146|ref|XP_015088205.1|//PREDICTED: protein tesmin/TSO1-like CXC 2 isoform X1 [Solanum pennellii];gi|723731988|ref|XP_004247675.2|//PREDICTED: protein tesmin/TSO1-like CXC 2 isoform X1 [Solanum lycopersicum]
Solyc09g007950.2.1	1374	102.706400746269	50.6014903244124	-1.02127431320594	0.016598570840936	Down	0.00325664209689545	NA	NA	NA	NA	gi|970049528|ref|XP_015086278.1|//PREDICTED: uncharacterized protein LOC107029390 [Solanum pennellii]
Solyc03g112350.3.1	3736	1852.24157858019	867.327562016472	-1.09462341287365	6.90144615923416e-05	Down	5.00601512227369e-06	NA	GO:0005524//ATP binding;GO:0004386//helicase activity;GO:0003676//nucleic acid binding	NA	K12823//ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]	gi|565355136|ref|XP_006344459.1|//PREDICTED: DEAD-box ATP-dependent RNA helicase 20 [Solanum tuberosum];gi|460381029|ref|XP_004236255.1|//PREDICTED: DEAD-box ATP-dependent RNA helicase 20 [Solanum lycopersicum];gi|970017899|ref|XP_015070098.1|//PREDICTED: DEAD-box ATP-dependent RNA helicase 20 [Solanum pennellii]
Solyc08g077120.2.1	1093	22.3882974214815	3.18721153953891	-2.8123781376963	0.00332518585468547	Down	0.000472381557083985	NA	NA	NA	K17964//leucine-rich PPR motif-containing protein, mitochondrial	gi|460400717|ref|XP_004245879.1|//PREDICTED: pentatricopeptide repeat-containing protein At5g46580, chloroplastic [Solanum lycopersicum]
Solyc01g104434.1.1	1476	122.929076841192	254.182841925504	1.04804044581581	0.000594694271472201	Up	6.11250846373985e-05	NA	NA	NA	K14297//nuclear pore complex protein Nup98-Nup96	gi|971553928|ref|XP_015165055.1|//PREDICTED: nuclear pore complex protein NUP98B-like isoform X1 [Solanum tuberosum]
Solyc07g065860.3.1	5200	104.445385618416	647.009886007355	2.63103900032835	5.91106763850407e-13	Up	7.11640949707037e-15	GO:0031224//intrinsic component of membrane	GO:0032559//adenyl ribonucleotide binding;GO:0004672//protein kinase activity	GO:0006464//cellular protein modification process	K00924;K17422//large subunit ribosomal protein L41;K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|460396930|ref|XP_004244023.1|//PREDICTED: probable LRR receptor-like serine/threonine-protein kinase At4g26540 [Solanum lycopersicum]
Solyc09g007750.3.1	2217	61.7921158739363	27.1137198354745	-1.18839971914335	0.0345061358594913	Down	0.00805815635724227	NA	GO:0000166//nucleotide binding	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|460402317|ref|XP_004246660.1|//PREDICTED: serine/threonine-protein kinase-like protein CCR1 isoform X1 [Solanum lycopersicum]
Solyc01g008980.3.1	1303	51.8792599294574	116.842859076511	1.17133976117103	0.0065442604230746	Up	0.00106436560605536	NA	NA	NA	K14432//ABA responsive element binding factor	gi|444300784|gb|AGD98701.1|//bZIP transcription factor family protein 3 [Camellia sinensis]
Solyc03g111280.1.1	1479	132.458899220817	305.066318537877	1.20357813095377	0.00159776279150827	Up	0.000195722936386416	NA	NA	NA	K20665	gi|460381637|ref|XP_004236553.1|//PREDICTED: cytochrome P450 94B3-like [Solanum lycopersicum]
Solyc01g102860.2.1	1110	101.269890215358	206.050501098422	1.02479267948461	0.00473734922420359	Up	0.000722187323418847	NA	NA	NA	NA	gi|460369099|ref|XP_004230401.1|//PREDICTED: uncharacterized protein LOC101252228 [Solanum lycopersicum]
Solyc05g054260.3.1	3230	2109.12078774076	1023.29814463428	-1.04341517454	1.08785545086431e-06	Down	4.55114846260765e-08	GO:0015630//microtubule cytoskeleton	GO:0032559//adenyl ribonucleotide binding;GO:0003774//motor activity	GO:0007017//microtubule-based process	K10393//kinesin family member 2/24	gi|460388313|ref|XP_004239812.1|//PREDICTED: kinesin-13A-like [Solanum lycopersicum]
Solyc06g051330.1.1	1636	30.4691587145986	71.771475265868	1.23606090942293	0.00444180233309037	Up	0.000667440124844354	NA	NA	NA	K12447//UDP-sugar pyrophosphorylase [EC:2.7.7.64];K08235//xyloglucan:xyloglucosyl transferase [EC:2.4.1.207];K06892//feruloyl-CoA ortho-hydroxylase [EC:1.14.11.-];K17982//geranyllinalool synthase [EC:4.2.3.144]	gi|723688342|ref|XP_010319082.1|//PREDICTED: uncharacterized protein LOC101254987 [Solanum lycopersicum]
Solyc09g063025.1.1	2087	903.866407191373	321.034650990715	-1.49338053234839	2.07884210450724e-05	Down	1.27327123631971e-06	NA	NA	NA	K20362//protein transport protein YIF1	gi|723730164|ref|XP_010326324.1|//PREDICTED: protein YIF1B-like isoform X1 [Solanum lycopersicum];gi|460403257|ref|XP_004247109.1|//PREDICTED: transcription factor PIF1-like [Solanum lycopersicum]
Solyc03g006470.3.1	1620	42.4802927968498	14.5749080351866	-1.54330692966901	0.0195100503041832	Down	0.00397100722895526	NA	NA	NA	NA	gi|460376672|ref|XP_004234121.1|//PREDICTED: CBS domain-containing protein CBSX5-like [Solanum lycopersicum]
Solyc05g050220.3.1	2273	43.9392605456376	175.399215532386	1.99705979944241	5.33766503776656e-07	Up	2.04831389711132e-08	NA	GO:0043565//sequence-specific DNA binding;GO:0005488//binding;GO:0003700//transcription factor activity, sequence-specific DNA binding	GO:0006355//regulation of transcription, DNA-templated	K09060//plant G-box-binding factor	gi|723702575|ref|XP_010321523.1|//PREDICTED: transcriptional activator TAF-1-like [Solanum lycopersicum]
Solyc01g107460.2.1	1037	2.65240450754994	10.0078173309674	1.91575464490763	0.0350672346011649	Up	0.00821929539372676	NA	NA	NA	NA	gi|460369762|ref|XP_004230726.1|//PREDICTED: uncharacterized protein LOC101248432 [Solanum lycopersicum]
Solyc09g009530.3.1	1486	278.115504245757	590.686313024019	1.08670800963613	4.52661582857277e-09	Up	1.12352096426646e-10	NA	NA	NA	NA	gi|460402074|ref|XP_004246539.1|//PREDICTED: uncharacterized protein LOC101261737 [Solanum lycopersicum]
Solyc03g059050.2.1	1051	37.7521883640401	8.00175786460292	-2.23817139680567	0.000858697685927493	Down	9.38493896771771e-05	NA	NA	NA	NA	gi|970056625|ref|XP_015054929.1|//PREDICTED: uncharacterized protein LOC107001369 [Solanum pennellii]
Solyc05g055470.3.1	2282	5133.69551563803	2256.20275342937	-1.1861010096317	1.52888711139431e-07	Down	5.2055787652816e-09	NA	NA	NA	K12581//CCR4-NOT transcription complex subunit 7/8;K13126//polyadenylate-binding protein	gi|460388105|ref|XP_004239710.1|//PREDICTED: NAC domain-containing protein 78-like [Solanum lycopersicum]
Solyc06g007620.3.1	1155	159.274987742958	604.687602233864	1.92467027363808	4.08943142151515e-10	Up	8.30809995341679e-12	NA	NA	NA	NA	gi|460389602|ref|XP_004240440.1|//PREDICTED: uncharacterized protein LOC101251683 [Solanum lycopersicum]
Solyc07g006370.1.1	1704	825.675582488871	252.837090845631	-1.70736692099164	3.2500447887083e-05	Down	2.13123704541707e-06	NA	NA	NA	K13754//solute carrier family 24 (sodium/potassium/calcium exchanger), member 6	gi|723712369|ref|XP_010323232.1|//PREDICTED: cation/calcium exchanger 1-like [Solanum lycopersicum]
Solyc11g066060.2.1	2236	67579.2497112092	19656.7932666762	-1.78155234810102	8.85162918141856e-13	Down	1.09563054954353e-14	NA	GO:0032559//adenyl ribonucleotide binding	GO:0050896//response to stimulus	K03283//heat shock 70kDa protein 1/8	gi|807045793|ref|NP_001234491.2|//heat shock cognate 70 kDa protein 1 [Solanum lycopersicum];gi|460411111|ref|XP_004250958.1|//PREDICTED: heat shock cognate 70 kDa protein 2-like [Solanum lycopersicum]
Solyc02g082180.3.1	2939	494.697990321094	173.800275770658	-1.50911766735926	1.48416718458809e-05	Down	8.66043379720139e-07	GO:0043231//intracellular membrane-bounded organelle	GO:0032559//adenyl ribonucleotide binding;GO:0003676//nucleic acid binding	GO:0006259//DNA metabolic process	K02542//DNA replication licensing factor MCM6 [EC:3.6.4.12]	gi|460373595|ref|XP_004232601.1|//PREDICTED: DNA replication licensing factor MCM6 [Solanum lycopersicum]
Solyc12g014430.2.1	2608	806.478024997637	244.536533655789	-1.72158520388745	1.06759585961137e-10	Down	1.91187219403692e-12	NA	GO:0016740//transferase activity	NA	K10999//cellulose synthase A [EC:2.4.1.12]	gi|460413047|ref|XP_004251907.1|//PREDICTED: cellulose synthase-like protein G3 [Solanum lycopersicum]
Solyc04g079050.2.1	2795	70.210481787887	12.6760250231596	-2.4695840150945	3.11817804857526e-06	Down	1.46875805749294e-07	NA	NA	NA	K17193//anthocyanidin 3-O-glucoside 2'''-O-xylosyltransferase [EC:2.4.2.51]	gi|460384935|ref|XP_004238162.1|//PREDICTED: UDP-glycosyltransferase 79B6-like [Solanum lycopersicum]
Solyc08g016440.3.1	989	2801.99606358638	5754.13141401576	1.0381432410294	0.000297366533011542	Up	2.71858794288204e-05	NA	NA	NA	NA	NA
Solyc06g072330.3.1	1819	226.206581551061	89.9105931811707	-1.33107789776715	0.0177103766398591	Down	0.00353259583780961	NA	GO:0005515//protein binding	NA	K09539//DnaJ homolog subfamily C member 19	gi|460391730|ref|XP_004241472.1|//PREDICTED: mitochondrial import inner membrane translocase subunit TIM14-3-like [Solanum lycopersicum]
Solyc12g087940.2.1	1366	336.134124430146	37.2882872353682	-3.17224257651651	1.68752911433555e-05	Down	1.00185137036173e-06	NA	NA	NA	K00924;K02882//large subunit ribosomal protein L18Ae	gi|460414727|ref|XP_004252715.1|//PREDICTED: protein ASPARTIC PROTEASE IN GUARD CELL 2-like [Solanum lycopersicum]
Solyc06g062930.1.1	381	19.0755235908509	5.33202955706712	-1.83896597428083	0.0255469902081639	Down	0.00552172531022956	NA	NA	NA	NA	gi|723710103|ref|XP_010322826.1|//PREDICTED: uncharacterized protein LOC104648074 [Solanum lycopersicum]
Solyc04g016160.3.1	4409	649.582231776966	161.953648790946	-2.00393119838265	6.72219379301605e-16	Down	4.87737980721184e-18	NA	NA	NA	K18134//protein O-GlcNAc transferase [EC:2.4.1.255]	gi|723688818|ref|XP_004236597.2|//PREDICTED: F-box/LRR-repeat protein At5g63520-like [Solanum lycopersicum];gi|460381731|ref|XP_004236596.1|//PREDICTED: EGF domain-specific O-linked N-acetylglucosamine transferase-like [Solanum lycopersicum]
Solyc04g074480.3.1	2080	51245.4939931473	8535.39424551312	-2.58589545703177	1.14876542812229e-31	Down	1.72876663374311e-34	GO:0009536//plastid	GO:0016765//transferase activity, transferring alkyl or aryl (other than methyl) groups	GO:0008652//cellular amino acid biosynthetic process	K01626//3-deoxy-7-phosphoheptulonate synthase [EC:2.5.1.54]	gi|350534836|ref|NP_001234418.1|//phospho-2-dehydro-3-deoxyheptonate aldolase 2, chloroplastic [Solanum lycopersicum]
Solyc12g009840.2.1	2684	171.674833403489	83.5452304579805	-1.0390491903537	0.0069564950157055	Down	0.00114602200201457	NA	NA	NA	K01507//inorganic pyrophosphatase [EC:3.6.1.1]	gi|460412703|ref|XP_004251737.1|//PREDICTED: pyrophosphate-energized vacuolar membrane proton pump-like [Solanum lycopersicum]
Solyc06g033850.3.1	1549	48.1765577263432	118.010326590069	1.29250988926374	0.000245966907241283	Up	2.17927790275854e-05	NA	NA	GO:0009743//response to carbohydrate	K09286//EREBP-like factor	gi|698545629|ref|XP_009767453.1|//PREDICTED: dehydration-responsive element-binding protein 2D-like [Nicotiana sylvestris];gi|697134931|ref|XP_009621512.1|//PREDICTED: dehydration-responsive element-binding protein 2D-like [Nicotiana tomentosiformis]
Solyc05g051270.3.1	1068	35.583713060637	88.0099848948886	1.30645014980466	0.0100813522586324	Up	0.00178339045598532	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460389227|ref|XP_004240260.1|//PREDICTED: cysteine-rich repeat secretory protein 60-like [Solanum lycopersicum]
Solyc01g100040.3.1	1537	7314.78927461077	14916.2276720554	1.02799451406435	2.47023690982625e-07	Up	8.72668343990537e-09	NA	GO:0016791//phosphatase activity	NA	K10147//protein phosphatase 1D [EC:3.1.3.16];K19704//protein phosphatase PTC1 [EC:3.1.3.16];K17506//protein phosphatase 1L [EC:3.1.3.16];K19477//cGMP-dependent protein kinase 2 [EC:2.7.11.12]	gi|460368831|ref|XP_004230268.1|//PREDICTED: probable protein phosphatase 2C 34 [Solanum lycopersicum]
Solyc04g077120.3.1	3342	1083.51824478799	2603.54656971945	1.26475476607924	0.000405925597930853	Up	3.91111909819757e-05	NA	NA	NA	K00913//inositol-1,3,4-trisphosphate 5/6-kinase / inositol-tetrakisphosphate 1-kinase [EC:2.7.1.159 2.7.1.134]	gi|460384703|ref|XP_004238049.1|//PREDICTED: inositol-tetrakisphosphate 1-kinase 2 isoform X2 [Solanum lycopersicum]
Solyc05g017785.1.1	1466	231.795985552299	480.345246118755	1.05121612893708	1.58608769365132e-06	Up	6.88617456160128e-08	NA	NA	NA	NA	NA
Solyc03g095850.1.1	1782	37.3231850853745	5.5682180394427	-2.74478449788933	0.00436522293891253	Down	0.000653141144772579	NA	NA	NA	K15502//serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A;K01599//uroporphyrinogen decarboxylase [EC:4.1.1.37]	gi|723683400|ref|XP_004235235.2|//PREDICTED: peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase A-like [Solanum lycopersicum]
Solyc07g048100.2.1	10645	27.6997686030248	8.24014964549219	-1.74913148154248	0.0417364013476504	Down	0.0101978607347919	NA	NA	NA	K15601//lysine-specific demethylase 3 [EC:1.14.11.-]	gi|723716017|ref|XP_010323867.1|//PREDICTED: uncharacterized protein LOC101260553 isoform X2 [Solanum lycopersicum]
Solyc09g092220.3.1	2049	15.3802135665897	37.1308244824799	1.27154181388565	0.0311738575858416	Up	0.00705809913286663	NA	NA	NA	NA	gi|460404812|ref|XP_004247874.1|//PREDICTED: probable magnesium transporter NIPA2 [Solanum lycopersicum];gi|970052211|ref|XP_015087708.1|//PREDICTED: probable magnesium transporter NIPA1 isoform X1 [Solanum pennellii]
Solyc07g052480.3.1	3041	5290.51680178324	2222.3425185496	-1.25132746900413	0.0069521483910725	Down	0.00114456739500878	GO:0005777//peroxisome	GO:0016833//oxo-acid-lyase activity	GO:0044262//cellular carbohydrate metabolic process;GO:0043436//oxoacid metabolic process;GO:0009060//aerobic respiration	K01637//isocitrate lyase [EC:4.1.3.1]	gi|922959962|ref|NP_001233878.2|//isocitrate lyase [Solanum lycopersicum]
Solyc04g078250.3.1	1711	613.849864901363	267.851164384659	-1.19645427743535	0.00253808097418682	Down	0.000340893494275657	NA	NA	NA	K12347//natural resistance-associated macrophage protein	gi|460384835|ref|XP_004238113.1|//PREDICTED: metal transporter Nramp2 [Solanum lycopersicum]
Solyc07g064690.1.1	390	313.293668169316	125.26014913256	-1.32258811067	3.56135294925944e-11	Down	5.80160205804867e-13	NA	NA	NA	NA	gi|460397104|ref|XP_004244108.1|//PREDICTED: uncharacterized protein LOC101245381 [Solanum lycopersicum]
Solyc10g079810.1.1	243	286.020224309191	123.001931200781	-1.21743619578355	1.27354922959524e-07	Down	4.27391238825791e-09	NA	NA	NA	NA	NA
Solyc12g041980.2.1	1406	185.103073452481	407.805943566875	1.13955395213961	3.97704000963901e-07	Up	1.47829779139328e-08	GO:0031436//BRCA1-BARD1 complex;GO:0005886//plasma membrane;GO:0070531//BRCA1-A complex	GO:0008270//zinc ion binding;GO:0004842//ubiquitin-protein transferase activity	GO:0016567//protein ubiquitination;GO:0042127//regulation of cell proliferation;GO:0035067//negative regulation of histone acetylation;GO:0071158//positive regulation of cell cycle arrest;GO:0045944//positive regulation of transcription from RNA polymerase II promoter;GO:0045717//negative regulation of fatty acid biosynthetic process;GO:0035066//positive regulation of histone acetylation;GO:0000724//double-strand break repair via homologous recombination	K10683//BRCA1-associated RING domain protein 1	gi|565370035|ref|XP_006351634.1|//PREDICTED: BRCA1-associated RING domain protein 1-like [Solanum tuberosum];gi|970027203|ref|XP_015074908.1|//PREDICTED: BRCA1-associated RING domain protein 1-like [Solanum pennellii]
Solyc03g031530.3.1	1712	108.139318424302	47.3932523106404	-1.19013759574103	0.0116462917405545	Down	0.00211850340728295	NA	NA	NA	NA	gi|460377374|ref|XP_004234468.1|//PREDICTED: uncharacterized protein LOC101251260 [Solanum lycopersicum]
BGI_novel_G000271	1569	57.2159510632249	191.113907860161	1.7399434580258	0.000106950228161907	Up	8.25665418315398e-06	NA	NA	NA	K01601//ribulose-bisphosphate carboxylase large chain [EC:4.1.1.39];K07759//poly(ADP-ribose) glycohydrolase [EC:3.2.1.143];K15502//serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit A;K02469//DNA gyrase subunit A [EC:5.99.1.3];K01247//DNA-3-methyladenine glycosylase II [EC:3.2.2.21]	gi|723707251|ref|XP_010322369.1|//PREDICTED: uncharacterized protein LOC101252695 isoform X1 [Solanum lycopersicum]
Solyc12g006230.2.1	881	71.4239135661209	33.5863296987245	-1.08853303937539	0.0170047290079801	Down	0.00335616284333573	NA	NA	NA	K16285//RING/U-box domain-containing protein [EC:2.3.2.27]	gi|723747243|ref|XP_010313683.1|//PREDICTED: probable E3 ubiquitin-protein ligase XERICO [Solanum lycopersicum]
Solyc08g074682.1.1	1776	4439.04271384492	1223.77847868702	-1.85890615745	1.90536635591612e-09	Down	4.35840009178706e-11	GO:0009534//chloroplast thylakoid	GO:0043169//cation binding;GO:0016682//oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor	GO:0008152//metabolic process	K00422//polyphenol oxidase [EC:1.10.3.1]	gi|460401025|ref|XP_004246030.1|//PREDICTED: polyphenol oxidase D, chloroplastic [Solanum lycopersicum]
BGI_novel_G000427	1632	546.785198573847	103.537780436747	-2.40081689359053	0.0147852056062232	Down	0.0028190903691625	NA	NA	NA	K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6];K20093//DNA excision repair protein ERCC-6-like [EC:3.6.4.12];K03549//KUP system potassium uptake protein;K12447//UDP-sugar pyrophosphorylase [EC:2.7.7.64];K05658//ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:3.6.3.44]	gi|147785835|emb|CAN73071.1|//hypothetical protein VITISV_032383 [Vitis vinifera]
Solyc04g082040.3.1	3058	168.596643374354	439.242577013234	1.38144209194214	2.73849545922211e-11	Up	4.30658804347195e-13	NA	NA	NA	NA	gi|460385876|ref|XP_004238626.1|//PREDICTED: mechanosensitive ion channel protein 8-like [Solanum lycopersicum]
Solyc05g006880.1.1	390	46.4486850419927	122.143771061139	1.3948706329468	7.11286849289802e-05	Up	5.17810403828355e-06	NA	NA	NA	NA	gi|460386139|ref|XP_004238757.1|//PREDICTED: uncharacterized protein LOC101253779 [Solanum lycopersicum]
Solyc10g039230.1.1	3813	216.099218318236	990.194796016722	2.1960185135759	9.67173850552411e-18	Up	5.93112632204827e-20	NA	NA	NA	NA	gi|970028174|ref|XP_015075387.1|//PREDICTED: uncharacterized protein LOC107019387 [Solanum pennellii]
Solyc06g048620.3.1	4542	149.397139327867	61.7092260514148	-1.27559441778701	0.0185691252886665	Down	0.00373967372724725	GO:0016020//membrane	GO:0000166//nucleotide binding;GO:0004672//protein kinase activity;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K20718	gi|460390944|ref|XP_004241084.1|//PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At3g28040 [Solanum lycopersicum]
Solyc03g053027.1.1	2425	176.759980292328	365.98049671941	1.04997509327404	2.48878499818116e-06	Up	1.13765002738529e-07	NA	NA	NA	K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6];K04508//transducin (beta)-like 1;K12606//CCR4-NOT transcription complex subunit 9;K12447//UDP-sugar pyrophosphorylase [EC:2.7.7.64];K01456//peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase [EC:3.5.1.52]	gi|970028460|ref|XP_015075544.1|//PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC107019641 [Solanum pennellii];gi|971564890|ref|XP_015167893.1|//PREDICTED: uncharacterized protein LOC107062130 [Solanum tuberosum];gi|698527353|ref|XP_009760520.1|//PREDICTED: ribonuclease 3-like protein 2 isoform X1 [Nicotiana sylvestris];gi|802563284|ref|XP_012066815.1|//PREDICTED: uncharacterized protein LOC105629785 [Jatropha curcas]
Solyc01g068190.3.1	744	170.859643742501	388.258034844765	1.18420410156313	2.11835300993985e-08	Up	6.03308212386931e-10	NA	NA	NA	NA	gi|460366610|ref|XP_004229174.1|//PREDICTED: uncharacterized protein LOC101258592 [Solanum lycopersicum]
Solyc01g111250.3.1	1061	1617.78477487277	546.978722219485	-1.56446307123604	7.36203664297151e-06	Down	3.94414604198323e-07	NA	GO:0004620//phospholipase activity;GO:0042578//phosphoric ester hydrolase activity	GO:0007165//signal transduction;GO:0044238//primary metabolic process	K01771//1-phosphatidylinositol phosphodiesterase [EC:4.6.1.13]	gi|565387781|ref|XP_006359666.1|//PREDICTED: PI-PLC X-box domain-containing protein DDB_G0293730-like [Solanum tuberosum];gi|723666276|ref|XP_004231014.2|//PREDICTED: uncharacterized protein LOC101258705 [Solanum lycopersicum]
Solyc02g085110.3.1	2918	51.1833122618773	8.25158184745731	-2.6329308935596	0.000141850928353951	Down	1.14633481604322e-05	NA	NA	NA	K05909//laccase [EC:1.10.3.2]	gi|460373222|ref|XP_004232420.1|//PREDICTED: laccase-11 [Solanum lycopersicum]
Solyc05g010440.2.1	1441	152.033936576062	67.8304147386238	-1.16438917474791	0.00057608239880459	Down	5.89519986737579e-05	GO:0044464//cell part	GO:0016772//transferase activity, transferring phosphorus-containing groups	GO:0006644//phospholipid metabolic process	K00993//ethanolaminephosphotransferase [EC:2.7.8.1]	gi|723698224|ref|XP_010320804.1|//PREDICTED: choline/ethanolaminephosphotransferase 1-like [Solanum lycopersicum]
Solyc08g078040.3.1	3410	22509.5771275951	9862.25865116607	-1.19054895900731	8.37365809206175e-08	Down	2.69508085871828e-09	NA	GO:0016709//oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen	GO:0008152//metabolic process	K00480//salicylate hydroxylase [EC:1.14.13.1];K09838//zeaxanthin epoxidase [EC:1.14.13.90]	gi|460400583|ref|XP_004245813.1|//PREDICTED: LOW QUALITY PROTEIN: zeaxanthin epoxidase, chloroplastic-like [Solanum lycopersicum]
Solyc02g093830.3.1	1891	15233.5311352684	7441.40313039959	-1.03360381487734	3.38036241080326e-07	Down	1.23870315580225e-08	GO:0044424//intracellular part;GO:0005737//cytoplasm	GO:0050661//NADP binding;GO:0016616//oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor;GO:0000166//nucleotide binding;GO:0004345//glucose-6-phosphate dehydrogenase activity	GO:0006006//glucose metabolic process;GO:0006098//pentose-phosphate shunt;GO:0055114//oxidation-reduction process;GO:0019318//hexose metabolic process	K00036//glucose-6-phosphate 1-dehydrogenase [EC:1.1.1.49 1.1.1.363]	gi|460371960|ref|XP_004231802.1|//PREDICTED: glucose-6-phosphate 1-dehydrogenase, cytoplasmic isoform [Solanum lycopersicum]
Solyc01g099160.3.1	2882	69.4561461069216	154.910383179406	1.1572595792484	0.00800621531108462	Up	0.00135424921138587	NA	GO:0016702//oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen;GO:0046914//transition metal ion binding	GO:0006633//fatty acid biosynthetic process	K15718//linoleate 9S-lipoxygenase [EC:1.13.11.58]	gi|350538669|ref|NP_001234098.1|//lipoxygenase [Solanum lycopersicum]
Solyc03g111720.3.1	933	10188.1160377024	2139.38130860363	-2.25162174984493	4.14914568161595e-21	Down	1.62344300559842e-23	NA	GO:0016671//oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor;GO:0008113//peptide-methionine (S)-S-oxide reductase activity	GO:0006979//response to oxidative stress;GO:0043170//macromolecule metabolic process;GO:0030091//protein repair;GO:0055114//oxidation-reduction process	K07304//peptide-methionine (S)-S-oxide reductase [EC:1.8.4.11]	gi|994314812|ref|NP_001307131.1|//peptide methionine sulfoxide reductase [Solanum lycopersicum]
Solyc01g091470.3.1	3082	51.0319098983189	11.8465076008789	-2.10693782704049	0.00102223763777367	Down	0.000115413056420309	NA	NA	NA	NA	gi|460367930|ref|XP_004229823.1|//PREDICTED: putative DNA-binding protein ESCAROLA [Solanum lycopersicum]
Solyc12g043110.2.1	3196	2784.98408274489	1341.99293707717	-1.05329200339284	5.86427182268739e-07	Down	2.27246048809933e-08	NA	GO:0032440//2-alkenal reductase [NAD(P)] activity;GO:0005524//ATP binding;GO:0032559//adenyl ribonucleotide binding;GO:0016628//oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor	GO:0008152//metabolic process;GO:0050896//response to stimulus;GO:0055114//oxidation-reduction process	K09489//heat shock 70kDa protein 4	gi|460413943|ref|XP_004252334.1|//PREDICTED: heat shock 70 kDa protein 15-like [Solanum lycopersicum];gi|697113898|ref|XP_009610834.1|//PREDICTED: heat shock 70 kDa protein 15-like isoform X1 [Nicotiana tomentosiformis]
Solyc09g074590.1.1	309	9.27295918473848	1.88846025047273	-2.2958193875339	0.015944271495447	Down	0.00309647590141073	NA	GO:0015036//disulfide oxidoreductase activity	GO:0019725//cellular homeostasis	K03676//glutaredoxin 3	gi|460403963|ref|XP_004247455.1|//PREDICTED: monothiol glutaredoxin-S2-like [Solanum lycopersicum]
Solyc06g053700.1.1	348	295.706306290846	143.98677357791	-1.03822871716371	1.05960298331389e-05	Down	5.91990380068142e-07	NA	NA	NA	NA	gi|460390805|ref|XP_004241015.1|//PREDICTED: uncharacterized protein At4g14450, chloroplastic-like [Solanum lycopersicum]
Solyc01g108050.3.1	619	92.3900805004569	340.153266396507	1.88037507345905	2.81915422760576e-06	Up	1.31836294391044e-07	NA	NA	NA	K17065//dynamin 1-like protein [EC:3.6.5.5]	gi|697163923|ref|XP_009590783.1|//PREDICTED: dynamin-related protein 3B-like isoform X1 [Nicotiana tomentosiformis]
Solyc01g099290.3.1	2334	214.083394320537	463.967572278051	1.11585108032839	2.70638744938877e-06	Up	1.25850071009952e-07	NA	NA	NA	K03347//cullin 1	gi|460368718|ref|XP_004230212.1|//PREDICTED: cullin-1 isoform X1 [Solanum lycopersicum]
BGI_novel_G000494	218	13.582865262905	3.22372883782929	-2.07498554110312	0.038947354172911	Down	0.00937051655138322	NA	NA	NA	NA	gi|970035445|ref|XP_015079056.1|//PREDICTED: uncharacterized protein LOC107023007 [Solanum pennellii]
Solyc02g092120.3.1	900	2470.74867616444	964.46469942782	-1.35714792763722	2.72166756202143e-07	Down	9.75827383975329e-09	NA	NA	NA	NA	gi|807201098|ref|NP_001293111.1|//phytosulfokines 2 precursor [Solanum lycopersicum]
Solyc01g099020.3.1	1390	314.395736758239	145.651122507277	-1.11006483450617	0.000309543937733618	Down	2.84622040564696e-05	NA	NA	NA	K21026	gi|460368680|ref|XP_004230193.1|//PREDICTED: acetylajmalan esterase [Solanum lycopersicum]
Solyc07g054560.1.1	867	61.6375363692472	17.2325767999322	-1.83867075404125	0.0136962913710565	Down	0.00257127516710203	NA	NA	NA	NA	gi|460395498|ref|XP_004243320.1|//PREDICTED: serine/arginine repetitive matrix protein 1-like [Solanum lycopersicum]
Solyc05g039950.2.1	1763	89.7434238686401	9.35604923215766	-3.26183486802339	3.90890662062755e-07	Down	1.45150144264838e-08	NA	NA	NA	K13065//shikimate O-hydroxycinnamoyltransferase [EC:2.3.1.133];K15400//omega-hydroxypalmitate O-feruloyl transferase [EC:2.3.1.188];K19861//benzyl alcohol O-benzoyltransferase [EC:2.3.1.196 2.3.1.232]	gi|460389055|ref|XP_004240174.1|//PREDICTED: deacetylvindoline O-acetyltransferase-like isoform X1 [Solanum lycopersicum]
Solyc02g083280.3.1	941	518.507376231142	2228.93885473454	2.10392062254898	5.20820140069085e-19	Up	2.7432212042766e-21	NA	GO:0004871//signal transducer activity	NA	K15692//E3 ubiquitin-protein ligase RNF13 [EC:2.3.2.27]	gi|460373452|ref|XP_004232533.1|//PREDICTED: thiosulfate sulfurtransferase 16, chloroplastic isoform X2 [Solanum lycopersicum];gi|723672885|ref|XP_010316446.1|//PREDICTED: thiosulfate sulfurtransferase 16, chloroplastic isoform X1 [Solanum lycopersicum]
Solyc03g114585.1.1	1662	72.676666984461	152.543432695337	1.06965590735639	0.0131255102377631	Up	0.00244189797312787	NA	GO:0003824//catalytic activity	GO:0008152//metabolic process	K11129//H/ACA ribonucleoprotein complex subunit 2	gi|970019193|ref|XP_015070791.1|//PREDICTED: uridine-cytidine kinase C [Solanum pennellii]
Solyc06g060640.1.1	405	14.2252382834921	3.05296593830098	-2.22016942025364	0.019428863158241	Down	0.00395228980799884	NA	NA	NA	K02883//large subunit ribosomal protein L18e;K11855//ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12]	gi|460392808|ref|XP_004242005.1|//PREDICTED: 14 kDa proline-rich protein DC2.15-like [Solanum lycopersicum]
Solyc06g062370.3.1	959	758.939645309845	163.357357853313	-2.21595372252585	0.0269822618639786	Down	0.00591065631971955	NA	NA	NA	K20728	gi|460392702|ref|XP_004241953.1|//PREDICTED: acid phosphatase 1 [Solanum lycopersicum]
Solyc06g053440.3.1	1080	343.619162043661	1013.12063656591	1.5599235759479	2.98267883911503e-06	Up	1.40268944653641e-07	NA	NA	NA	NA	gi|460390769|ref|XP_004240997.1|//PREDICTED: uncharacterized protein LOC101245659 [Solanum lycopersicum]
Solyc06g073760.3.1	1181	1415.64181049512	162.244309835492	-3.12521649038018	1.05695071456284e-22	Down	3.30048567752882e-25	NA	NA	NA	K05349//beta-glucosidase [EC:3.2.1.21]	gi|460391525|ref|XP_004241371.1|//PREDICTED: lysosomal beta glucosidase-like [Solanum lycopersicum]
Solyc03g025935.1.1	802	1.34180039089826	56.0325644560961	5.38402354804967	3.92542098861206e-13	Up	4.5781809874708e-15	NA	NA	NA	K10269//F-box and leucine-rich repeat protein 3	gi|565373534|ref|XP_006353326.1|//PREDICTED: F-box/LRR-repeat protein At3g48880-like [Solanum tuberosum]
Solyc02g055440.3.1	1758	672.180944290206	1824.85427129035	1.44085970898501	8.75433034235549e-22	Up	3.03009176635329e-24	NA	NA	NA	K02184//formin 2	gi|971546812|ref|XP_015163266.1|//PREDICTED: uncharacterized protein LOC102605046 isoform X2 [Solanum tuberosum];gi|565356934|ref|XP_006345315.1|//PREDICTED: uncharacterized protein LOC102605612 isoform X2 [Solanum tuberosum];gi|460371813|ref|XP_004231729.1|//PREDICTED: uncharacterized protein LOC101246579 [Solanum lycopersicum]
Solyc06g069710.3.1	2141	341.963951654431	788.431747745449	1.20514161996765	0.00415839772286977	Up	0.000616250136583297	NA	NA	NA	K12581//CCR4-NOT transcription complex subunit 7/8;K13126//polyadenylate-binding protein;K05941//glutathione gamma-glutamylcysteinyltransferase [EC:2.3.2.15];K01054//acylglycerol lipase [EC:3.1.1.23]	gi|460391961|ref|XP_004241586.1|//PREDICTED: NAC domain-containing protein 100-like [Solanum lycopersicum]
Solyc02g061770.3.1	869	914.392715965361	320.922415711067	-1.51058934896497	1.24687431699627e-05	Down	7.10221112088924e-07	GO:0044421//extracellular region part	GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds	GO:0006950//response to stress;GO:0006026//aminoglycan catabolic process	K20547;K01183//chitinase [EC:3.2.1.14]	gi|525314362|ref|NP_001266258.1|//basic endochitinase precursor [Solanum lycopersicum]
Solyc07g005090.3.1	1217	2900.2960131576	744.567991589042	-1.96172465138708	5.57205615733525e-14	Down	5.38757875257772e-16	NA	GO:0004553//hydrolase activity, hydrolyzing O-glycosyl compounds	GO:0005975//carbohydrate metabolic process	K01183//chitinase [EC:3.2.1.14]	gi|460393931|ref|XP_004242561.1|//PREDICTED: acidic mammalian chitinase-like [Solanum lycopersicum]
Solyc08g077980.3.1	1317	6251.85472759393	2554.23332320764	-1.29139393741098	2.93925457770333e-13	Down	3.29532680269222e-15	GO:0016020//membrane;GO:0016021//integral component of membrane	NA	NA	NA	gi|350535435|ref|NP_001234450.1|//Bax inhibitor [Solanum lycopersicum];gi|183447473|gb|ACC62519.1|//Bax inhibitor [Capsicum annuum]
Solyc03g120310.3.1	2929	795.688032043525	380.579349372155	-1.06400561794329	1.30527151756358e-08	Down	3.5700992974745e-10	NA	NA	NA	K06119//sulfoquinovosyltransferase [EC:2.4.1.-];K03843//alpha-1,3/alpha-1,6-mannosyltransferase [EC:2.4.1.132 2.4.1.257]	gi|460379905|ref|XP_004235700.1|//PREDICTED: uncharacterized protein LOC101247116 [Solanum lycopersicum];gi|723685332|ref|XP_010318559.1|//PREDICTED: F-box/kelch-repeat protein At1g80440-like [Solanum lycopersicum]
Solyc02g086130.3.1	3525	469.373972051823	218.965103400483	-1.10003687809499	0.02886339848586	Down	0.00641077854707673	NA	NA	NA	NA	gi|460373075|ref|XP_004232348.1|//PREDICTED: uncharacterized protein LOC101265984 [Solanum lycopersicum]
Solyc07g052450.2.1	840	22.134935078918	4.07295755906002	-2.44217645566777	0.00182342785113937	Down	0.000228648797134971	GO:0016020//membrane	NA	NA	K15283//solute carrier family 35, member E1	gi|565403673|ref|XP_006367280.1|//PREDICTED: glucose-6-phosphate/phosphate translocator 2, chloroplastic-like [Solanum tuberosum]
Solyc01g090560.3.1	825	90.0634870231117	186.082017938532	1.04692440583892	0.0225254320406547	Up	0.00474152717334323	NA	NA	NA	K09286//EREBP-like factor	gi|460367812|ref|XP_004229764.1|//PREDICTED: ethylene-responsive transcription factor ERF038-like [Solanum lycopersicum]
Solyc05g007930.3.1	3397	298.338169800222	795.324537436392	1.41459511190113	4.09926267564901e-18	Up	2.37504308521425e-20	GO:0031224//intrinsic component of membrane;GO:0043231//intracellular membrane-bounded organelle;GO:0005794//Golgi apparatus;GO:0016021//integral component of membrane	GO:0030246//carbohydrate binding;GO:0016758//transferase activity, transferring hexosyl groups;GO:0010488//UDP-galactose:N-glycan beta-1,3-galactosyltransferase activity	GO:0006486//protein glycosylation;GO:0006464//cellular protein modification process;GO:0010493//Lewis a epitope biosynthetic process	K14413//beta-1,3-galactosyltransferase [EC:2.4.1.-]	gi|460386276|ref|XP_004238825.1|//PREDICTED: beta-1,3-galactosyltransferase 15 [Solanum lycopersicum]
Solyc08g005100.3.1	1200	129.395557453968	37.8858549343066	-1.77205687673118	0.000152137568237964	Down	1.2432008962109e-05	NA	NA	NA	NA	gi|723719221|ref|XP_010324467.1|//PREDICTED: uncharacterized protein LOC101268014 [Solanum lycopersicum]
Solyc01g028860.3.1	3244	11730.3928303436	5547.38242989975	-1.08037223583728	1.88863538752584e-09	Down	4.31302362764555e-11	NA	NA	NA	K20102//YTH domain-containing family protein	gi|460366135|ref|XP_004228948.1|//PREDICTED: uncharacterized protein LOC101253713 [Solanum lycopersicum]
Solyc12g009530.1.1	1467	1441.64468608159	2.10651443372302	-9.41864211905581	5.2690468144283e-59	Down	1.98233514463066e-62	NA	NA	NA	K10406//kinesin family member C2/C3	gi|970064679|ref|XP_015059311.1|//PREDICTED: receptor-like protein 12 [Solanum pennellii]
Solyc12g098660.2.1	1662	108.070938910123	263.764715441633	1.2872729604097	1.9282021790351e-07	Up	6.68849664812024e-09	NA	NA	NA	K12462//Rho GDP-dissociation inhibitor	gi|723753127|ref|XP_010314742.1|//PREDICTED: pheophytinase, chloroplastic isoform X2 [Solanum lycopersicum];gi|460415253|ref|XP_004252974.1|//PREDICTED: pheophytinase, chloroplastic isoform X1 [Solanum lycopersicum];gi|971554800|ref|XP_015165264.1|//PREDICTED: pheophytinase, chloroplastic isoform X2 [Solanum tuberosum]
Solyc04g045475.1.1	773	19.7091406413747	63.1841721296169	1.68069832986717	0.000460757458231402	Up	4.52783476636728e-05	NA	NA	NA	NA	gi|970025657|ref|XP_015074140.1|//PREDICTED: uncharacterized protein At1g04910 [Solanum pennellii]
Solyc09g011330.2.1	2313	322.375575155765	658.546288644101	1.03054240786798	0.0161494142862892	Up	0.00314542956208124	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460402725|ref|XP_004246861.1|//PREDICTED: putative receptor protein kinase ZmPK1 [Solanum lycopersicum]
Solyc04g056630.3.1	2022	969.453231734286	411.06814956938	-1.23779370849541	3.24313147430886e-06	Down	1.53249553488786e-07	NA	NA	NA	NA	gi|460383311|ref|XP_004237371.1|//PREDICTED: CBS domain-containing protein CBSX6 [Solanum lycopersicum]
Solyc01g017087.1.1	264	89.2777659068311	238.543690279319	1.41788069546308	3.63637295969718e-09	Up	8.68734698798988e-11	GO:0030529//intracellular ribonucleoprotein complex;GO:0009536//plastid	GO:0003723//RNA binding;GO:0005198//structural molecule activity	GO:0010467//gene expression	K02963//small subunit ribosomal protein S18	gi|11465981|ref|NP_054523.1|//ribosomal protein S18 [Nicotiana tabacum]
BGI_novel_G000162	2532	287.29603425262	688.956191841	1.26187417175724	0.00129831200864926	Up	0.000153423552263631	NA	NA	NA	NA	gi|460400215|ref|XP_004245631.1|//PREDICTED: uncharacterized protein LOC101265850 [Solanum lycopersicum]
Solyc03g006970.1.1	2328	248.848073363455	45.9761449508971	-2.43630780954549	0.000383705118430228	Down	3.66382088252791e-05	NA	GO:0004175//endopeptidase activity;GO:0005515//protein binding	GO:0044092//negative regulation of molecular function;GO:0019538//protein metabolic process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K11262//acetyl-CoA carboxylase / biotin carboxylase 1 [EC:6.4.1.2 6.3.4.14];K13199//plasminogen activator inhibitor 1 RNA-binding protein;K01183//chitinase [EC:3.2.1.14]	gi|350537305|ref|NP_001234288.1|//SBT2 protein precursor [Solanum lycopersicum]
BGI_novel_G000012	520	19.5644300804894	5.58731028945224	-1.80800723735193	0.0232484123773148	Down	0.00492519977790293	NA	NA	NA	K14565//nucleolar protein 58;K11131//H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-]	gi|15144506|gb|AAK84473.1|//unknown [Solanum lycopersicum]
Solyc12g010870.2.1	1327	222.877371366559	499.144096501271	1.16320621536122	5.34318624820953e-05	Up	3.74706514923347e-06	NA	NA	NA	K02116//ATP synthase protein I	gi|460412833|ref|XP_004251802.1|//PREDICTED: uncharacterized protein LOC101257837 [Solanum lycopersicum]
Solyc01g097230.3.1	460	120.613600975942	46.7840584661929	-1.36630367725942	6.10224126973306e-05	Down	4.35150084657275e-06	NA	NA	NA	K20359//PRA1 family protein 1	gi|460368468|ref|XP_004230088.1|//PREDICTED: PRA1 family protein F3 [Solanum lycopersicum]
Solyc05g005190.3.1	856	10907.7187188314	5083.62598639519	-1.10141960546682	1.11730975572658e-10	Down	2.01771513449495e-12	GO:0043231//intracellular membrane-bounded organelle	GO:0032561//guanyl ribonucleotide binding	GO:0006464//cellular protein modification process;GO:0035556//intracellular signal transduction;GO:0015031//protein transport	K07937//ADP-ribosylation factor 1	gi|697151091|ref|XP_009629758.1|//PREDICTED: ADP-ribosylation factor 2 isoform X1 [Nicotiana tomentosiformis]
Solyc03g119580.1.1	1158	49.6638643908742	3.06843423767082	-4.01662195406234	4.8949656632225e-06	Down	2.45669081818616e-07	NA	NA	NA	K09286//EREBP-like factor	gi|460381359|ref|XP_004236418.1|//PREDICTED: uncharacterized protein LOC101265720 [Solanum lycopersicum]
Solyc01g104410.3.1	1917	88.2669216401202	201.027458544554	1.18744778515248	0.000109677847785078	Up	8.50023951983675e-06	NA	NA	NA	K05841//sterol 3beta-glucosyltransferase [EC:2.4.1.173]	gi|460369330|ref|XP_004230516.1|//PREDICTED: sterol 3-beta-glucosyltransferase UGT80B1 [Solanum lycopersicum]
Solyc01g057680.3.1	1004	111.899351743663	313.351932712809	1.48558221299912	6.84956973753113e-07	Up	2.68777322657824e-08	NA	NA	NA	K13420//LRR receptor-like serine/threonine-protein kinase FLS2 [EC:2.7.11.1]	gi|723751177|ref|XP_004252390.2|//PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Solanum lycopersicum];gi|971575440|ref|XP_015170720.1|//PREDICTED: probable leucine-rich repeat receptor-like protein kinase At1g35710 [Solanum tuberosum]
Solyc08g082590.3.1	1507	29.259871035909	62.3651773469512	1.09181728993763	0.0212409123377838	Up	0.00440641048271407	NA	NA	NA	K17479//glutaredoxin domain-containing cysteine-rich protein 1	gi|460399956|ref|XP_004245502.1|//PREDICTED: glutaredoxin domain-containing cysteine-rich protein 1 [Solanum lycopersicum]
Solyc12g049420.2.1	1177	1474.07798750516	5575.74020413176	1.9193504882713	6.49665615735857e-10	Up	1.37119040793008e-11	NA	NA	NA	K08517//vesicle transport protein SEC22	gi|460414081|ref|XP_004252403.1|//PREDICTED: 25.3 kDa vesicle transport protein [Solanum lycopersicum]
Solyc07g007360.2.1	1618	281.625241776622	137.064939749814	-1.03891705998705	5.09344278455743e-05	Down	3.53394588298111e-06	NA	NA	NA	K14861//nucleolar pre-ribosomal-associated protein 1	gi|723712612|ref|XP_010323271.1|//PREDICTED: uncharacterized protein LOC101255505 [Solanum lycopersicum]
Solyc02g072120.3.1	1147	91.9308028842253	30.3716446070355	-1.59782330881518	2.22370749510687e-05	Down	1.3797573138859e-06	GO:0031224//intrinsic component of membrane;GO:0043231//intracellular membrane-bounded organelle	GO:0005048//signal sequence binding;GO:0004871//signal transducer activity	GO:0006810//transport;GO:0035437//maintenance of protein localization in endoplasmic reticulum	K10949//ER lumen protein retaining receptor	gi|460374531|ref|XP_004233064.1|//PREDICTED: ER lumen protein-retaining receptor A isoform X1 [Solanum lycopersicum]
Solyc03g096780.1.1	342	316.700411745895	786.622513123737	1.31255273374872	1.05041721741911e-10	Up	1.87715642691526e-12	NA	NA	NA	NA	gi|460379031|ref|XP_004235268.1|//PREDICTED: uncharacterized protein LOC101243970 [Solanum lycopersicum]
Solyc07g066310.3.1	782	18525.6672248246	38298.2848884748	1.0477542814926	1.10328015403034e-13	Up	1.11241189345422e-15	GO:0009523//photosystem II;GO:0009534//chloroplast thylakoid	NA	GO:0044237//cellular metabolic process	K03541//photosystem II 10kDa protein	gi|350537547|ref|NP_001234042.1|//photosystem II 10 kDa polypeptide, chloroplastic [Solanum lycopersicum]
Solyc01g112100.3.1	2071	235.274863631619	544.281166021985	1.21000492107745	1.74032239726069e-09	Up	3.94813546105417e-11	NA	GO:0004497//monooxygenase activity;GO:0050662//coenzyme binding	NA	K00485//dimethylaniline monooxygenase (N-oxide forming) [EC:1.14.13.8]	gi|460370495|ref|XP_004231088.1|//PREDICTED: probable flavin-containing monooxygenase 1 [Solanum lycopersicum]
Solyc03g078490.3.1	1642	14962.8039013688	4810.15362650809	-1.63722567267589	2.04728914635036e-08	Down	5.79988234462687e-10	NA	GO:0016757//transferase activity, transferring glycosyl groups	NA	K04628//2-hydroxyacylsphingosine 1-beta-galactosyltransferase [EC:2.4.1.45];K13030//cyanohydrin beta-glucosyltransferase [EC:2.4.1.85]	gi|460378617|ref|XP_004235065.1|//PREDICTED: 7-deoxyloganetin glucosyltransferase-like [Solanum lycopersicum]
Solyc05g055310.3.1	616	1495.63937409936	3598.72017450964	1.26672156996422	6.07288747504517e-13	Up	7.34249390753205e-15	NA	GO:0043169//cation binding	GO:0006812//cation transport	K07213//copper chaperone	gi|350538525|ref|NP_001234347.1|//copper chaperone [Solanum lycopersicum]
Solyc08g081660.2.1	456	26.7311077141852	55.854743776709	1.06316019199728	0.0336447869306629	Up	0.00778336323689414	NA	NA	NA	NA	gi|970027753|ref|XP_015075168.1|//PREDICTED: ethylene-responsive transcription factor ERF116-like [Solanum pennellii]
Solyc12g007180.2.1	2508	1237.58623546481	458.755582790689	-1.43173143627537	1.65414791626803e-06	Down	7.2314517633689e-08	NA	NA	NA	NA	gi|723747525|ref|XP_010313729.1|//PREDICTED: protein tesmin/TSO1-like CXC 5 isoform X1 [Solanum lycopersicum];gi|460412455|ref|XP_004251614.1|//PREDICTED: protein tesmin/TSO1-like CXC 5 isoform X2 [Solanum lycopersicum]
Solyc01g103110.3.1	2110	586.188344627041	1215.92086801507	1.05261315356362	1.68084661684396e-08	Up	4.70485283270091e-10	NA	NA	NA	K09919//uncharacterized protein	gi|460369137|ref|XP_004230420.1|//PREDICTED: uncharacterized protein LOC101258197 [Solanum lycopersicum];gi|971553739|ref|XP_015165013.1|//PREDICTED: uncharacterized protein LOC102578218 isoform X1 [Solanum tuberosum]
Solyc02g090500.3.1	3706	144.340965987535	332.444096981181	1.20363094579684	0.00769029439359243	Up	0.00129213148087975	NA	NA	NA	NA	gi|970006767|ref|XP_015064247.1|//PREDICTED: uncharacterized protein LOC107009425 [Solanum pennellii];gi|969999284|ref|XP_015081908.1|//PREDICTED: high mobility group B protein 10-like [Solanum pennellii]
Solyc10g085130.2.1	1178	49.6267291813474	109.351497949785	1.13978370610739	0.00617887458734871	Up	0.0009912235229667	NA	GO:0046914//transition metal ion binding	NA	NA	gi|460408426|ref|XP_004249646.1|//PREDICTED: uncharacterized protein LOC101243841 [Solanum lycopersicum]
Solyc07g052250.3.1	360	22.0162694090797	130.278183579174	2.56495357565022	0.000299031281982914	Up	2.73718250212351e-05	NA	NA	NA	NA	NA
Solyc10g005630.3.1	2262	249.605953848844	87.7436429100616	-1.50828583717964	2.17682751291223e-05	Down	1.34475198502704e-06	NA	GO:0004713//protein tyrosine kinase activity;GO:0032559//adenyl ribonucleotide binding	GO:0006464//cellular protein modification process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460405769|ref|XP_004248347.1|//PREDICTED: putative serine/threonine-protein kinase [Solanum lycopersicum]
Solyc03g005160.3.1	2969	6.40820727714064	1.4759991226583	-2.11822894944709	0.0354590462814802	Down	0.00833114161128082	NA	GO:0046872//metal ion binding;GO:0016491//oxidoreductase activity	GO:0008152//metabolic process	K00276//primary-amine oxidase [EC:1.4.3.21]	gi|460376450|ref|XP_004234011.1|//PREDICTED: primary amine oxidase [Solanum lycopersicum]
Solyc12g098630.2.1	4433	76.281719939027	18.514875151071	-2.04265255154171	0.0269822618639786	Down	0.00591214044754745	NA	NA	NA	K10400//kinesin family member 15	gi|723753133|ref|XP_010314743.1|//PREDICTED: kinesin-like protein KIN12B [Solanum lycopersicum]
Solyc07g006130.2.1	2176	720.776529064288	358.39392457258	-1.00800585155435	0.0028219776835259	Down	0.000387305289296558	GO:0005737//cytoplasm	GO:0016149//translation release factor activity, codon specific	GO:0006415//translational termination	K03265//peptide chain release factor subunit 1	gi|460394082|ref|XP_004242634.1|//PREDICTED: eukaryotic peptide chain release factor subunit 1-3-like [Solanum lycopersicum]
Solyc01g098210.3.1	1303	500.481638470291	228.608642224435	-1.1304371972254	4.71590948151826e-08	Down	1.44245086850051e-09	NA	NA	NA	NA	gi|969997097|ref|XP_015066071.1|//PREDICTED: transmembrane protein adipocyte-associated 1 [Solanum pennellii];gi|460368591|ref|XP_004230149.1|//PREDICTED: transmembrane protein adipocyte-associated 1 [Solanum lycopersicum]
Solyc05g054590.3.1	1601	192.230412168284	94.0771286606463	-1.03092066511857	0.022107310822318	Down	0.00463521607271551	NA	GO:0016831//carboxy-lyase activity;GO:0048040//UDP-glucuronate decarboxylase activity;GO:0048037//cofactor binding	GO:0008152//metabolic process	K08678//UDP-glucuronate decarboxylase [EC:4.1.1.35]	gi|970026611|ref|XP_015074621.1|//PREDICTED: UDP-glucuronic acid decarboxylase 6-like [Solanum pennellii]
Solyc08g074730.2.1	2131	31.3873082190473	77.3487534972727	1.30119673386674	0.00166761208937916	Up	0.000205847827887623	NA	NA	NA	K10798//poly [ADP-ribose] polymerase [EC:2.4.2.30]	gi|723726191|ref|XP_010325650.1|//PREDICTED: poly [ADP-ribose] polymerase 2-like [Solanum lycopersicum];gi|970045767|ref|XP_015084364.1|//PREDICTED: LOW QUALITY PROTEIN: poly [ADP-ribose] polymerase 2-like [Solanum pennellii]
Solyc03g096770.1.1	348	76.8974527202288	246.638634622949	1.68139109405548	5.77947640530916e-06	Up	2.96366679474657e-07	NA	NA	NA	NA	gi|460379029|ref|XP_004235267.1|//PREDICTED: uncharacterized protein LOC101243684 [Solanum lycopersicum]
Solyc07g006035.1.1	6549	504.383244166362	1311.32611565509	1.37843426156056	1.88089781419781e-06	Up	8.35681586767045e-08	NA	GO:0005488//binding	NA	K03255//protein TIF31	gi|723712262|ref|XP_010323210.1|//PREDICTED: clustered mitochondria protein homolog isoform X2 [Solanum lycopersicum];gi|723712259|ref|XP_010323209.1|//PREDICTED: clustered mitochondria protein homolog isoform X1 [Solanum lycopersicum]
Solyc01g009760.3.1	937	197.460240197648	426.27145438338	1.11021026004044	1.39837124931794e-05	Up	8.10192522178191e-07	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K03868//RING-box protein 1	gi|460365093|ref|XP_004228440.1|//PREDICTED: GEM-like protein 5 [Solanum lycopersicum]
Solyc10g081040.1.1	588	3895.90274730487	1851.15821526079	-1.07352945903748	3.00955485445253e-12	Down	4.07024806893402e-14	NA	NA	NA	NA	gi|460407788|ref|XP_004249332.1|//PREDICTED: uncharacterized protein LOC101251527 [Solanum lycopersicum]
Solyc08g061210.3.1	1340	416.342637781146	1028.51335985239	1.3047173158292	6.25844809734463e-10	Up	1.31149570738185e-11	NA	NA	NA	NA	NA
Solyc09g007347.1.1	4633	111.459729073623	43.7918815955368	-1.34778720758294	0.0107248647542958	Down	0.00192167015227316	NA	NA	NA	K14306//nuclear pore complex protein Nup62	gi|723728479|ref|XP_010326018.1|//PREDICTED: uncharacterized protein LOC101247653 isoform X2 [Solanum lycopersicum]
Solyc06g082210.1.1	669	43.4410516180792	13.2493275168222	-1.7131398921595	0.0163560811197059	Down	0.00319552781243916	NA	NA	NA	NA	gi|460393816|ref|XP_004242504.1|//PREDICTED: protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 5-like [Solanum lycopersicum]
Solyc01g101130.3.1	2670	1343.8064333776	3152.64345409934	1.23023667651298	0.000150006134610527	Up	1.2246550493034e-05	NA	NA	NA	K20827;K20283//golgin subfamily A member 4;K12472//epidermal growth factor receptor substrate 15;K09291//nucleoprotein TPR;K06636//structural maintenance of chromosome 1;K10400//kinesin family member 15	gi|969996321|ref|XP_015062576.1|//PREDICTED: myosin-11-like isoform X2 [Solanum pennellii];gi|460369005|ref|XP_004230355.1|//PREDICTED: myosin-11 [Solanum lycopersicum];gi|565385276|ref|XP_006358538.1|//PREDICTED: myosin-11-like isoform X1 [Solanum tuberosum]
Solyc02g085285.1.1	3071	2949.0347128886	6600.98334315058	1.1624381532287	0.000117872138444751	Up	9.2328740497356e-06	NA	NA	NA	NA	NA
Solyc09g089500.3.1	529	38.3580492023206	9.25039278958661	-2.05194281857192	0.0434346560733216	Down	0.0107491786173931	NA	NA	NA	NA	gi|723732301|ref|XP_010326741.1|//PREDICTED: proteinase inhibitor I-B-like isoform X2 [Solanum lycopersicum]
Solyc03g115720.3.1	2007	237.570073175345	607.317687966223	1.35409827736341	7.75635546341191e-15	Up	6.4831093084829e-17	NA	NA	NA	K20779;K09553//stress-induced-phosphoprotein 1	gi|723686837|ref|XP_010318821.1|//PREDICTED: LON peptidase N-terminal domain and RING finger protein 1 [Solanum lycopersicum]
Solyc11g007420.1.1	390	565.874220231576	1416.16440963265	1.32343544628149	8.20946253201863e-08	Up	2.63456416095255e-09	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|723741012|ref|XP_004249994.2|//PREDICTED: glycerophosphodiester phosphodiesterase protein kinase domain-containing GDPDL2-like [Solanum lycopersicum]
Solyc08g013690.1.1	1170	155.368253494198	60.6258623743602	-1.35768647785044	3.51454283928534e-06	Down	1.68058086859732e-07	NA	NA	NA	K09287//RAV-like factor	gi|460398365|ref|XP_004244732.1|//PREDICTED: B3 domain-containing protein Os03g0120900-like [Solanum lycopersicum]
Solyc09g005000.1.1	2025	1875.96088520548	881.726324842199	-1.08922690859488	0.00200111663232209	Down	0.000256727152604151	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1]	gi|460402568|ref|XP_004246783.1|//PREDICTED: lectin-domain containing receptor kinase VI.3-like [Solanum lycopersicum]
Solyc03g044790.3.1	1001	91.353610678788	336.411224034626	1.88069218405254	6.25211637721465e-07	Up	2.4345148421434e-08	NA	NA	NA	K08233//polyneuridine-aldehyde esterase [EC:3.1.1.78]	gi|350538063|ref|NP_001233813.1|//methylesterase [Solanum lycopersicum]
Solyc08g068600.3.1	1505	6120.1847697895	792.703605265302	-2.94872176588229	4.68104939316415e-23	Down	1.37367137948384e-25	NA	GO:0048037//cofactor binding;GO:0016830//carbon-carbon lyase activity	GO:0043436//oxoacid metabolic process	K01590//histidine decarboxylase [EC:4.1.1.22]	gi|460399503|ref|XP_004245279.1|//PREDICTED: histidine decarboxylase-like [Solanum lycopersicum]
BGI_novel_G000483	3628	74.5507108880957	27.1716337718091	-1.4561207952693	0.00493804080701683	Down	0.000756869008569847	NA	NA	NA	K03006//DNA-directed RNA polymerase II subunit RPB1 [EC:2.7.7.6];K08176//MFS transporter, PHS family, inorganic phosphate transporter;K03549//KUP system potassium uptake protein;K12447//UDP-sugar pyrophosphorylase [EC:2.7.7.64]	gi|723681009|ref|XP_010317833.1|//PREDICTED: uncharacterized protein LOC104646241 [Solanum lycopersicum]
Solyc10g084960.2.1	1448	2748.78652306526	5621.1941013802	1.03208176416553	5.09394324132353e-07	Up	1.95095343102609e-08	NA	GO:0016765//transferase activity, transferring alkyl or aryl (other than methyl) groups	GO:0009755//hormone-mediated signaling pathway	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|460408228|ref|XP_004249548.1|//PREDICTED: probable glutathione S-transferase [Solanum lycopersicum]
Solyc04g008920.1.1	642	51.0943786175184	7.31961833345922	-2.80332424598144	0.00184322132520511	Down	0.000231893608408047	NA	NA	NA	K06997//PLP dependent protein	gi|723691047|ref|XP_010319550.1|//PREDICTED: UPF0481 protein At3g47200-like [Solanum lycopersicum]
Solyc05g005580.3.1	2491	24.8111890371659	5.64483372803209	-2.13598788448738	0.0252587953486336	Down	0.00544042902072713	NA	NA	NA	NA	gi|460385964|ref|XP_004238670.1|//PREDICTED: uncharacterized protein LOC101252685 [Solanum lycopersicum]
Solyc09g083190.3.1	988	291.733681144787	798.457755828767	1.452564123264	7.79456107000976e-05	Up	5.75354733610201e-06	NA	NA	NA	NA	gi|460404325|ref|XP_004247633.1|//PREDICTED: uncharacterized protein LOC101266364 [Solanum lycopersicum]
Solyc02g082770.3.1	2998	439.864709005719	1088.28091050996	1.30691923621107	2.54837138341608e-07	Up	9.06785910822447e-09	GO:0016021//integral component of membrane	GO:0052866//phosphatidylinositol phosphate phosphatase activity	GO:0016311//dephosphorylation	K08739//DNA mismatch repair protein MLH3	gi|697176649|ref|XP_009597276.1|//PREDICTED: phosphoinositide phosphatase SAC6-like [Nicotiana tomentosiformis];gi|971539159|ref|XP_015160667.1|//PREDICTED: DNA mismatch repair protein MLH3 isoform X7 [Solanum tuberosum];gi|565347642|ref|XP_006340833.1|//PREDICTED: phosphoinositide phosphatase SAC6 [Solanum tuberosum]
Solyc05g016395.1.1	774	19.1868240013496	72.1626951244066	1.91113729950545	0.00186288048622696	Up	0.000235348106574497	NA	NA	NA	K09651//rhomboid domain-containing protein 1 [EC:3.4.21.-]	gi|698524903|ref|XP_009759262.1|//PREDICTED: uncharacterized protein At3g17611 [Nicotiana sylvestris]
Solyc01g087840.3.1	2658	114.273384997172	40.5337763126441	-1.49529293491586	0.00346990925954462	Down	0.000498946320164769	NA	GO:0004175//endopeptidase activity;GO:0005515//protein binding	GO:0044092//negative regulation of molecular function;GO:0019538//protein metabolic process	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K13199//plasminogen activator inhibitor 1 RNA-binding protein;K12663//Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase [EC:5.3.3.-];K01183//chitinase [EC:3.2.1.14]	gi|3970757|emb|CAA07062.1|//SBT4E protein [Solanum lycopersicum]
Solyc10g080010.2.1	1890	2949.90548141193	943.112397267294	-1.64516710723059	3.47570026997575e-13	Down	3.98829413973892e-15	NA	GO:0016740//transferase activity	NA	K18134//protein O-GlcNAc transferase [EC:2.4.1.255]	gi|460407630|ref|XP_004249254.1|//PREDICTED: EGF domain-specific O-linked N-acetylglucosamine transferase [Solanum lycopersicum]
Solyc07g005840.2.1	3345	147.567372137422	41.7267074357842	-1.82233077951804	0.00372363184168014	Down	0.000542154071757041	GO:0031224//intrinsic component of membrane	GO:0016759//cellulose synthase activity;GO:0046914//transition metal ion binding	GO:0045229//external encapsulating structure organization;GO:0009250//glucan biosynthetic process	K10999//cellulose synthase A [EC:2.4.1.12]	gi|460394041|ref|XP_004242614.1|//PREDICTED: cellulose synthase A catalytic subunit 7 [UDP-forming] [Solanum lycopersicum]
Solyc11g012610.2.1	1804	141.628799732187	28.4835508031815	-2.31391375114931	0.000710960927071267	Down	7.50012956925445e-05	NA	NA	NA	NA	gi|460409724|ref|XP_004250288.1|//PREDICTED: uncharacterized protein LOC101263179 [Solanum lycopersicum]
Solyc02g094190.3.1	2715	256.187415485977	13.8633502279035	-4.20785176141049	8.96816087889233e-32	Down	1.31587010638375e-34	NA	NA	NA	K14794//ribosomal RNA-processing protein 12	gi|460371906|ref|XP_004231775.1|//PREDICTED: probable transporter mch1 [Solanum lycopersicum]
Solyc03g031440.3.1	1042	107.751685854026	242.885778034186	1.1725675751803	2.99735086580463e-05	Up	1.94636102121099e-06	NA	GO:0000166//nucleotide binding;GO:0003824//catalytic activity	NA	K03809//NAD(P)H dehydrogenase (quinone) [EC:1.6.5.2]	gi|698521517|ref|XP_009757565.1|//PREDICTED: minor allergen Alt a 7-like [Nicotiana sylvestris]
Solyc02g078410.1.1	489	364.093027975835	178.762266804975	-1.02626487071563	4.26160338989203e-05	Down	2.87794510340714e-06	NA	NA	NA	NA	gi|460374119|ref|XP_004232859.1|//PREDICTED: uncharacterized protein LOC101245223 [Solanum lycopersicum]
Solyc07g065340.1.1	996	773.432619069425	327.749680402033	-1.23868123689032	0.00115607054895739	Down	0.000133222125336963	GO:0044424//intracellular part	GO:0016412//serine O-acyltransferase activity	GO:0006563//L-serine metabolic process	K00640//serine O-acetyltransferase [EC:2.3.1.30]	gi|723719082|ref|XP_004244065.2|//PREDICTED: LOW QUALITY PROTEIN: serine acetyltransferase 1, chloroplastic-like [Solanum lycopersicum]
Solyc03g118020.3.1	3503	15625.5930677673	6524.05069321167	-1.26007105091255	2.24489709918718e-11	Down	3.49359593185909e-13	GO:0031332//RNAi effector complex	GO:0016787//hydrolase activity;GO:0005488//binding	GO:0016458//gene silencing	K15979//staphylococcal nuclease domain-containing protein 1	gi|460380231|ref|XP_004235861.1|//PREDICTED: staphylococcal nuclease domain-containing protein 1 [Solanum lycopersicum]
Solyc10g051380.2.1	851	1935.89903522452	6176.4185023831	1.67376679785897	1.26430747793117e-25	Up	2.80640109849281e-28	NA	GO:0005488//binding	NA	K12741//heterogeneous nuclear ribonucleoprotein A1/A3;K13195//cold-inducible RNA-binding protein;K13098//RNA-binding protein FUS	gi|970054854|ref|XP_015089072.1|//PREDICTED: glycine-rich RNA-binding protein-like [Solanum pennellii];gi|685341703|ref|XP_009107498.1|//PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial [Brassica rapa]
Solyc06g009020.2.1	1403	46199.4703734217	19999.4458097839	-1.20791628973748	6.9979861867144e-08	Down	2.22471720382756e-09	NA	GO:0016765//transferase activity, transferring alkyl or aryl (other than methyl) groups	GO:0009755//hormone-mediated signaling pathway	K00799//glutathione S-transferase [EC:2.5.1.18]	gi|460389800|ref|XP_004240536.1|//PREDICTED: glutathione S-transferase [Solanum lycopersicum]
Solyc12g009510.1.1	2924	4797.33019470234	1106.3407210875	-2.1164359794548	1.4939983369651e-10	Down	2.78227681263252e-12	NA	NA	NA	K10406//kinesin family member C2/C3	gi|970064679|ref|XP_015059311.1|//PREDICTED: receptor-like protein 12 [Solanum pennellii];gi|723747890|ref|XP_010313777.1|//PREDICTED: receptor-like protein 12 [Solanum lycopersicum];gi|723747887|ref|XP_010313776.1|//PREDICTED: receptor-like protein 12 [Solanum lycopersicum]
Solyc09g090300.3.1	521	3.82986910591084	14.6379664666033	1.93434815480547	0.0348660977563616	Up	0.00816120561043311	NA	NA	NA	K16904//dCTP diphosphatase [EC:3.6.1.12]	gi|460404548|ref|XP_004247743.1|//PREDICTED: dCTP pyrophosphatase 1-like isoform X1 [Solanum lycopersicum]
Solyc08g081260.1.1	2994	64.0892200830238	30.1862968420744	-1.08618793095078	0.0189709456282596	Down	0.00383844039084952	NA	GO:0000166//nucleotide binding	GO:0050896//response to stimulus	NA	gi|460401191|ref|XP_004246111.1|//PREDICTED: uncharacterized protein LOC101259964 [Solanum lycopersicum]
Solyc10g044510.2.1	2638	1203.71742836094	2605.17313682886	1.11388249514016	0.00032997653082153	Up	3.06389043667244e-05	NA	NA	NA	K08472//mlo protein	gi|460406802|ref|XP_004248847.1|//PREDICTED: MLO-like protein 4 [Solanum lycopersicum]
Solyc08g067180.3.1	1065	258.130310571987	51.1662682521326	-2.33483463658502	0.00137737671786111	Down	0.000164943193865761	NA	NA	NA	K14651//transcription initiation factor TFIID subunit 15;K15407//queuine tRNA-ribosyltransferase subunit QTRTD1 [EC:2.4.2.29]	gi|970044532|ref|XP_015083686.1|//PREDICTED: transcription initiation factor TFIID subunit 15 isoform X1 [Solanum pennellii]
Solyc06g074370.2.1	1149	52.3454492027123	25.2904607913029	-1.04947079480655	0.0291329858628715	Down	0.00648625629620521	GO:0031228//intrinsic component of Golgi membrane	GO:0016757//transferase activity, transferring glycosyl groups	GO:0006464//cellular protein modification process	K03368//beta-galactoside alpha-2,3-sialyltransferase (sialyltransferase 4B) [EC:2.4.99.4];K00780//beta-galactoside alpha-2,3-sialyltransferase (sialyltransferase 4A) [EC:2.4.99.4]	gi|460391415|ref|XP_004241316.1|//PREDICTED: CMP-N-acetylneuraminate-beta-galactosamide-alpha-2,3-sialyltransferase 1 [Solanum lycopersicum]
Solyc02g067780.3.1	2271	132.196790009002	29.9704760381834	-2.14107324157977	8.53782015689409e-07	Down	3.43375837009774e-08	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K04730//interleukin-1 receptor-associated kinase 1 [EC:2.7.11.1]	gi|970007067|ref|XP_015064401.1|//PREDICTED: putative cysteine-rich receptor-like protein kinase 43 isoform X2 [Solanum pennellii]
Solyc08g076490.2.1	1468	257.096423130983	830.156546562023	1.69107387923669	2.1399468301293e-12	Up	2.79368528989792e-14	NA	NA	NA	K13448//calcium-binding protein CML	gi|723726410|ref|XP_010325688.1|//PREDICTED: mitogen-activated protein kinase kinase kinase NPK1-like [Solanum lycopersicum]
Solyc04g081660.2.1	354	41.3594720703463	15.5619255631701	-1.41019718659508	0.0388234485704791	Down	0.00932755991614295	NA	NA	NA	K05868//cyclin B	gi|565350348|ref|XP_006342132.1|//PREDICTED: G2/mitotic-specific cyclin-2-like [Solanum tuberosum]
Solyc02g062780.3.1	1819	2230.54178949449	4876.41957543091	1.12842808578633	3.86619496341900e-09	Up	9.32366806452813e-11	NA	GO:0005524//ATP binding;GO:0003676//nucleic acid binding	NA	K19001//ATP-dependent DNA helicase	gi|460375444|ref|XP_004233516.1|//PREDICTED: F-box protein At5g07610 [Solanum lycopersicum];gi|460376365|ref|XP_004233969.1|//PREDICTED: ATP-dependent DNA helicase DDM1-like [Solanum lycopersicum]
Solyc01g105180.3.1	1684	356.074939062483	784.978712388227	1.14047262965917	2.63084625325067e-11	Up	4.11821192741035e-13	NA	NA	NA	NA	gi|723664452|ref|XP_010315105.1|//PREDICTED: protein DA1-related 6-like isoform X4 [Solanum lycopersicum];gi|460369432|ref|XP_004230566.1|//PREDICTED: protein DA1-like isoform X2 [Solanum lycopersicum]
Solyc05g010080.3.1	3852	74.5400335206685	33.5355257948363	-1.15232524597471	0.00555358556587571	Down	0.000872453917414855	NA	NA	NA	K17808//mitochondrial protein import protein ZIM17	gi|971552654|ref|XP_015164773.1|//PREDICTED: uncharacterized protein LOC102593015 isoform X2 [Solanum tuberosum]
Solyc09g072990.3.1	2049	301.111742927904	607.36852069074	1.01227316478128	1.8828373683308e-05	Up	1.12913572803586e-06	NA	NA	NA	K06634//cyclin H	gi|460404038|ref|XP_004247492.1|//PREDICTED: uncharacterized protein LOC101268799 [Solanum lycopersicum]
Solyc07g043240.3.1	1416	68.9009799866192	27.6580122549892	-1.31682702707765	0.0171567788532	Down	0.00339456358122568	NA	NA	NA	K01051//pectinesterase [EC:3.1.1.11]	gi|460396163|ref|XP_004243648.1|//PREDICTED: probable pectinesterase 8 [Solanum lycopersicum]
Solyc03g116630.3.1	1165	576.172666839858	227.878332469435	-1.3382374676047	8.2928016722249e-09	Down	2.19643806517921e-10	NA	NA	NA	NA	gi|460380438|ref|XP_004235963.1|//PREDICTED: uncharacterized protein LOC101253674 [Solanum lycopersicum]
Solyc04g080550.3.1	1362	42.7043153683155	14.3260128639151	-1.57574472221309	0.00903890121056687	Down	0.00156565467168735	NA	NA	NA	K13081//leucoanthocyanidin reductase [EC:1.17.1.3]	gi|970022980|ref|XP_015072827.1|//PREDICTED: isoflavone reductase-like protein [Solanum pennellii]
Solyc12g013850.2.1	2500	9.19297024987217	39.2861763694746	2.09541878363599	0.00186140244479498	Up	0.000235091347147357	NA	NA	NA	K20891	gi|723748529|ref|XP_010313899.1|//PREDICTED: xylosyltransferase 1-like [Solanum lycopersicum]
Solyc06g048930.3.1	2323	33.4350939598826	86.1892427185975	1.3661446461372	0.000213757355784015	Up	1.85047282038758e-05	NA	GO:0004871//signal transducer activity;GO:0016772//transferase activity, transferring phosphorus-containing groups	GO:0007165//signal transduction;GO:0006351//transcription, DNA-templated;GO:0006796//phosphate-containing compound metabolic process	K14492//two-component response regulator ARR-A family	gi|723705799|ref|XP_010322123.1|//PREDICTED: LOW QUALITY PROTEIN: two-component response regulator ARR17 [Solanum lycopersicum]
Solyc08g079980.1.1	2271	7.21248956099738	278.813216827573	5.27265781626725	2.49065328856078e-29	Up	4.12297760333614e-32	NA	NA	NA	K04733//interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1];K08653//membrane-bound transcription factor site-1 protease [EC:3.4.21.112];K13199//plasminogen activator inhibitor 1 RNA-binding protein;K01183//chitinase [EC:3.2.1.14]	gi|723724629|ref|XP_004245672.2|//PREDICTED: LOW QUALITY PROTEIN: subtilisin-like protease SDD1 [Solanum lycopersicum]
Solyc12g005640.2.1	755	2613.01871888068	584.004448378783	-2.16166619641892	2.58646724408715e-10	Down	5.09897981904314e-12	NA	NA	NA	K09422//myb proto-oncogene protein, plant	gi|460413310|ref|XP_004252033.1|//PREDICTED: myb-related protein Myb4-like [Solanum lycopersicum]
Solyc00g050430.3.1	2603	116.12871713618	31.6005013103774	-1.87770542561382	0.0223435919997458	Down	0.0046956849101046	NA	NA	NA	K16190//glucuronokinase [EC:2.7.1.43];K13422//transcription factor MYC2	gi|460416079|ref|XP_004253378.1|//PREDICTED: transcription factor bHLH93 [Solanum lycopersicum]