Bicluster # 1 GeneMerge v1.2; C:\AGO\AGB_FV_Sin_Traslape\GOAGB_FV_Sin_Traslapecluster1.txt Gene Association File: S_cerevisiae.BP Description File: GO.BP.use Population File: pop.txt Study File: C:\AGO\AGB_FV_Sin_Traslape\AGB_FV_Sin_Traslapecluster1.txt GMRG_Term Pop_freq Pop_frac Study_frac Raw_es e-score Description Contributing_genes GO:0006607 0.00768459739391914 23/2993 1/71 NA NA NLS-bearing substrate import into nucleus YKL068W GO:0006408 0.00768459739391914 23/2993 1/71 NA NA snRNA export from nucleus YKL068W GO:0006096 0.00534580688272636 16/2993 1/71 NA NA glycolysis YGR240C GO:0006360 0.00801871032408954 24/2993 2/71 0.109613983541996 1 transcription from RNA polymerase I promoter YBR154C YJR063W GO:0015741 0.000334112930170398 1/2993 1/71 NA NA fumarate transport YJR095W GO:0042138 0.00200467758102239 6/2993 1/71 NA NA meiotic DNA double-strand break formation YGL213C GO:0006623 0.00668225860340795 20/2993 1/71 NA NA protein targeting to vacuole YNL093W GO:0006609 0.00768459739391914 23/2993 1/71 NA NA mRNA-binding (hnRNP) protein import into nucleus YKL068W GO:0008299 0.00100233879051119 3/2993 1/71 NA NA isoprenoid biosynthetic process YNR043W GO:0000027 0.0100233879051119 30/2993 6/71 5.45143879286259e-005 0.00403406470671832 ribosomal large subunit assembly and maintenance YDR418W YEL054C YGR085C YLR340W YLR448W YML073C GO:0006364 0.0106916137654527 32/2993 1/71 NA NA rRNA processing YGL030W GO:0006893 0.00467758102238557 14/2993 1/71 NA NA Golgi to plasma membrane transport YJL085W GO:0006413 0.00935516204477113 28/2993 2/71 0.141471054329615 1 translational initiation YER025W YMR260C GO:0006436 0.000668225860340795 2/2993 1/71 NA NA tryptophanyl-tRNA aminoacylation YOL097C GO:0006412 0.0811894420314066 243/2993 31/71 1.74735717028951e-016 1.29304430601424e-014 translation YBL072C YDL081C YDL082W YDR064W YDR418W YEL054C YGL030W YGR034W YGR085C YHL033C YHR064C YJL190C YJR123W YKL180W YLR048W YLR185W YLR264W YLR333C YLR340W YLR344W YLR367W YLR388W YLR448W YML073C YMR142C YNL178W YNL301C YPL079W YPL090C YPL198W YPL220W GO:0019344 0.000668225860340795 2/2993 1/71 NA NA cysteine biosynthetic process YGR155W GO:0006487 0.0100233879051119 30/2993 1/71 NA NA protein amino acid N-linked glycosylation YPL050C GO:0008150 0.0180420982292015 54/2993 2/71 0.368460821180734 1 biological_process YGR240C YKL068W GO:0006561 0.00100233879051119 3/2993 1/71 NA NA proline biosynthetic process YDR300C GO:0006430 0.000668225860340795 2/2993 1/71 NA NA lysyl-tRNA aminoacylation YDR037W GO:0007059 0.00902104911460073 27/2993 1/71 NA NA chromosome segregation YIL144W GO:0006904 0.00200467758102239 6/2993 1/71 NA NA vesicle docking during exocytosis YJL085W GO:0006999 0.00835282325425994 25/2993 1/71 NA NA nuclear pore organization and biogenesis YKL068W GO:0006110 0.000668225860340795 2/2993 1/71 NA NA regulation of glycolysis YIL107C GO:0042254 0.0370865352489141 111/2993 4/71 0.268573963208892 1 ribosome biogenesis and assembly YDR300C YGR123C YJR063W YML093W GO:0006610 0.00768459739391914 23/2993 1/71 NA NA ribosomal protein import into nucleus YKL068W GO:0005993 0.00100233879051119 3/2993 1/71 NA NA trehalose catabolic process YPR026W GO:0006611 0.00935516204477113 28/2993 1/71 NA NA protein export from nucleus YKL068W GO:0007121 0.00902104911460073 27/2993 1/71 NA NA bipolar bud site selection YJL085W GO:0006407 0.00868693618443034 26/2993 1/71 NA NA rRNA export from nucleus YKL068W GO:0006415 0.00100233879051119 3/2993 1/71 NA NA translational termination YBR143C GO:0006365 0.0200467758102239 60/2993 1/71 NA NA 35S primary transcript processing YLL011W GO:0006566 0.00167056465085199 5/2993 1/71 NA NA threonine metabolic process YCR053W GO:0006402 0.00968927497494153 29/2993 1/71 NA NA mRNA catabolic process YGL213C GO:0007020 0.00768459739391914 23/2993 1/71 NA NA microtubule nucleation YIL144W GO:0006608 0.00768459739391914 23/2993 1/71 NA NA snRNP protein import into nucleus YKL068W GO:0015986 0.00434346809221517 13/2993 1/71 NA NA ATP synthesis coupled proton transport YBR039W GO:0006906 0.00768459739391914 23/2993 1/71 NA NA vesicle fusion YJL085W GO:0007039 0.00233879051119278 7/2993 1/71 NA NA vacuolar protein catabolic process YMR174C GO:0006379 0.00467758102238557 14/2993 1/71 NA NA mRNA cleavage YNL317W GO:0030490 0.0106916137654527 32/2993 2/71 0.175017839589913 1 processing of 20S pre-rRNA YLL011W YML093W GO:0030467 0.00100233879051119 3/2993 1/71 NA NA establishment and/or maintenance of cell polarity (sensu Fungi) YDR093W GO:0006378 0.00501169395255596 15/2993 1/71 NA NA mRNA polyadenylation YNL317W GO:0000154 0.00367524223187437 11/2993 1/71 NA NA rRNA modification YLL011W GO:0017148 0.000668225860340795 2/2993 1/71 NA NA negative regulation of protein biosynthetic process YGL030W GO:0045332 0.00233879051119278 7/2993 1/71 NA NA phospholipid translocation YDR093W GO:0006598 0.00100233879051119 3/2993 1/71 NA NA polyamine catabolic process YMR169C GO:0042493 0.021049114600735 63/2993 1/71 NA NA response to drug YGR155W GO:0006468 0.0304042766455062 91/2993 1/71 NA NA protein amino acid phosphorylation YOR351C GO:0000910 0.0113598396257935 34/2993 2/71 0.192244589986164 1 cytokinesis YBR143C YJL085W GO:0006696 0.00768459739391914 23/2993 1/71 NA NA ergosterol biosynthetic process YNR043W GO:0019483 0.000668225860340795 2/2993 1/71 NA NA beta-alanine biosynthetic process YMR169C GO:0006886 0.00467758102238557 14/2993 1/71 NA NA intracellular protein transport YDR093W GO:0006003 0.000668225860340795 2/2993 1/71 NA NA fructose 2,6-bisphosphate metabolic process YIL107C GO:0006508 0.00534580688272636 16/2993 1/71 NA NA proteolysis YLR244C GO:0006350 0.00902104911460073 27/2993 1/71 NA NA transcription YLR182W GO:0006461 0.00601403274306716 18/2993 1/71 NA NA protein complex assembly YGL213C GO:0006406 0.0136986301369863 41/2993 1/71 NA NA mRNA export from nucleus YKL068W GO:0006950 0.0180420982292015 54/2993 3/71 0.13498322975931 1 response to stress YIL101C YMR169C YPR026W GO:0006414 0.00534580688272636 16/2993 3/71 0.00574002997777394 0.424762218355272 translational elongation YDL081C YDR385W YLR340W GO:0043330 0.00233879051119278 7/2993 1/71 NA NA response to exogenous dsRNA YGL213C GO:0006434 0.000668225860340795 2/2993 1/71 NA NA seryl-tRNA aminoacylation YDR023W GO:0006450 0.00334112930170398 10/2993 1/71 NA NA regulation of translational fidelity YHR064C GO:0000028 0.00367524223187437 11/2993 1/71 NA NA ribosomal small subunit assembly and maintenance YLR048W GO:0000083 0.00300701637153358 9/2993 1/71 NA NA G1/S-specific transcription in mitotic cell cycle YLR182W GO:0006897 0.0183762111593719 55/2993 3/71 0.140464670320072 1 endocytosis YCR053W YDR093W YNL093W GO:0006470 0.00902104911460073 27/2993 1/71 NA NA protein amino acid dephosphorylation YGR123C GO:0006974 0.00768459739391914 23/2993 1/71 NA NA response to DNA damage stimulus YNL178W GO:0006409 0.00902104911460073 27/2993 1/71 NA NA tRNA export from nucleus YKL068W GO:0006366 0.0140327430671567 42/2993 1/71 NA NA transcription from RNA polymerase II promoter YBR154C GO:0006446 0.00300701637153358 9/2993 2/71 0.0179356614880106 1 regulation of translational initiation YKR026C YOR260W GO:0006267 0.00434346809221517 13/2993 1/71 NA NA pre-replicative complex formation YJL194W GO:0007126 0.0113598396257935 34/2993 3/71 0.0452911842598202 1 meiosis YLR182W YNL012W YOR351C GO:0048025 0.000334112930170398 1/2993 1/71 NA NA negative regulation of nuclear mRNA splicing, via spliceosome YGL030W GO:0006383 0.00701637153357835 21/2993 1/71 NA NA transcription from RNA polymerase III promoter YBR154C GO:0000723 0.0547945205479452 164/2993 6/71 0.190974252704122 1 telomere maintenance YDL081C YDR300C YDR418W YJL190C YLR264W YMR142C GO:0015744 0.000334112930170398 1/2993 1/71 NA NA succinate transport YJR095W Total number of genes: 2993 Total number of Study genes: 71 Total number of Study gene GMRG terms (pop non-singletons): 77 (74) Genes with GMRG information: 70 Genes with no GMRG information: 1 These are: YFR031C-A Bicluster # 2 GeneMerge v1.2; C:\AGO\AGB_FV_Sin_Traslape\GOAGB_FV_Sin_Traslapecluster2.txt Gene Association File: S_cerevisiae.BP Description File: GO.BP.use Population File: pop.txt Study File: C:\AGO\AGB_FV_Sin_Traslape\AGB_FV_Sin_Traslapecluster2.txt GMRG_Term Pop_freq Pop_frac Study_frac Raw_es e-score Description Contributing_genes GO:0006879 0.00668225860340795 20/2993 1/72 NA NA iron ion homeostasis YJR049C GO:0006260 0.00634814567323755 19/2993 1/72 NA NA DNA replication YER070W GO:0006308 0.000334112930170398 1/2993 1/72 NA NA DNA catabolic process YJL208C GO:0006360 0.00801871032408954 24/2993 4/72 0.00227303457430541 0.136382074458325 transcription from RNA polymerase I promoter YJL148W YNL248C YOR224C YPR110C GO:0006741 0.000334112930170398 1/2993 1/72 NA NA NADP biosynthetic process YJR049C GO:0007035 0.00534580688272636 16/2993 1/72 NA NA vacuolar acidification YGR020C GO:0009082 0.00233879051119278 7/2993 1/72 NA NA branched chain family amino acid biosynthetic process YHR208W GO:0000154 0.00367524223187437 11/2993 1/72 NA NA rRNA modification YER127W GO:0006597 0.000668225860340795 2/2993 1/72 NA NA spermine biosynthetic process YLR146C GO:0017148 0.000668225860340795 2/2993 1/72 NA NA negative regulation of protein biosynthetic process YGL030W GO:0006826 0.00100233879051119 3/2993 1/72 NA NA iron ion transport YKL220C GO:0006457 0.00868693618443034 26/2993 1/72 NA NA protein folding YJL111W GO:0008361 0.00634814567323755 19/2993 1/72 NA NA regulation of cell size YNL248C GO:0006468 0.0304042766455062 91/2993 1/72 NA NA protein amino acid phosphorylation YMR001C GO:0000027 0.0100233879051119 30/2993 6/72 5.90569451859412e-005 0.00354341671115647 ribosomal large subunit assembly and maintenance YDR418W YEL054C YLR075W YLR276C YLR340W YLR448W GO:0006364 0.0106916137654527 32/2993 1/72 NA NA rRNA processing YGL030W GO:0006413 0.00935516204477113 28/2993 3/72 0.0284300012107474 1 translational initiation YKR059W YMR309C YPL237W GO:0006474 0.00167056465085199 5/2993 1/72 NA NA N-terminal protein amino acid acetylation YDL040C GO:0001302 0.00701637153357835 21/2993 1/72 NA NA replicative cell aging YHL003C GO:0006261 0.00601403274306716 18/2993 1/72 NA NA DNA-dependent DNA replication YMR001C GO:0007010 0.00467758102238557 14/2993 1/72 NA NA cytoskeleton organization and biogenesis YJL111W GO:0015677 0.00167056465085199 5/2993 1/72 NA NA copper ion import YKL220C GO:0006412 0.0811894420314066 243/2993 25/72 8.0812191395564e-011 4.84873148373384e-009 translation YBL027W YBR031W YDL075W YDL081C YDL082W YDR012W YDR025W YDR418W YEL054C YGL030W YGL076C YIL133C YJL190C YJR123W YKL006W YKR094C YLR075W YLR167W YLR340W YLR367W YLR448W YML063W YNL069C YNL301C YOR167C GO:0000082 0.0103575008352823 31/2993 1/72 NA NA G1/S transition of mitotic cell cycle YOL133W GO:0006310 0.00467758102238557 14/2993 1/72 NA NA DNA recombination YJL208C GO:0008150 0.0180420982292015 54/2993 1/72 NA NA biological_process YMR001C GO:0030150 0.00501169395255596 15/2993 2/72 0.0489638541020402 1 protein import into mitochondrial matrix YLR008C YOR232W GO:0006561 0.00100233879051119 3/2993 1/72 NA NA proline biosynthetic process YDR300C GO:0016567 0.00968927497494153 29/2993 3/72 0.0311750116068889 1 protein ubiquitination YKR094C YLR167W YOL133W GO:0031146 0.00233879051119278 7/2993 1/72 NA NA SCF-dependent proteasomal ubiquitin-dependent protein catabolic process YOL133W GO:0006121 0.00133645172068159 4/2993 1/72 NA NA mitochondrial electron transport, succinate to ubiquinone YDR178W GO:0006414 0.00534580688272636 16/2993 3/72 0.00597001383979117 0.35820083038747 translational elongation YDL081C YJL102W YLR340W GO:0006450 0.00334112930170398 10/2993 1/72 NA NA regulation of translational fidelity YDR025W GO:0006434 0.000668225860340795 2/2993 1/72 NA NA seryl-tRNA aminoacylation YDR023W GO:0006099 0.00467758102238557 14/2993 1/72 NA NA tricarboxylic acid cycle YDR178W GO:0000122 0.0113598396257935 34/2993 1/72 NA NA negative regulation of transcription from RNA polymerase II promoter YDR443C GO:0042254 0.0370865352489141 111/2993 13/72 1.40170687659034e-006 8.41024125954206e-005 ribosome biogenesis and assembly YDR300C YER127W YHR065C YJL148W YJL208C YKR060W YKR094C YLR167W YLR276C YML093W YMR309C YNL248C YPR110C GO:0000028 0.00367524223187437 11/2993 2/72 0.0272806295171459 1 ribosomal small subunit assembly and maintenance YDR025W YLR167W GO:0006635 0.00300701637153358 9/2993 1/72 NA NA fatty acid beta-oxidation YIL160C GO:0009073 0.00167056465085199 5/2993 2/72 0.00544590496067478 0.326754297640487 aromatic amino acid family biosynthetic process YBR249C YGL148W GO:0006883 0.000668225860340795 2/2993 1/72 NA NA sodium ion homeostasis YDR436W GO:0042256 0.000334112930170398 1/2993 1/72 NA NA mature ribosome assembly YPR041W GO:0006401 0.00133645172068159 4/2993 1/72 NA NA RNA catabolic process YJL208C GO:0006810 0.0147009689274975 44/2993 2/72 0.28607394268667 1 transport YKR103W YLR083C GO:0015940 0.00267290344136318 8/2993 1/72 NA NA pantothenate biosynthetic process YLR146C GO:0009083 0.000668225860340795 2/2993 1/72 NA NA branched chain family amino acid catabolic process YHR208W GO:0007323 0.00267290344136318 8/2993 1/72 NA NA peptide pheromone maturation YDR410C GO:0006388 0.00400935516204477 12/2993 1/72 NA NA tRNA splicing YKL205W GO:0006415 0.00100233879051119 3/2993 1/72 NA NA translational termination YDR172W GO:0006365 0.0200467758102239 60/2993 6/72 0.00281517008470097 0.168910205082058 35S primary transcript processing YDR280W YER127W YGR158C YHR065C YKR060W YLR276C GO:0000288 0.00367524223187437 11/2993 1/72 NA NA mRNA catabolic process, deadenylation-dependent decay YDR172W GO:0006409 0.00902104911460073 27/2993 1/72 NA NA tRNA export from nucleus YKL205W GO:0006429 0.000668225860340795 2/2993 1/72 NA NA leucyl-tRNA aminoacylation YPL160W GO:0006402 0.00968927497494153 29/2993 2/72 0.15311011626723 1 mRNA catabolic process YDR280W YGR158C GO:0006366 0.0140327430671567 42/2993 1/72 NA NA transcription from RNA polymerase II promoter YOR224C GO:0008033 0.00434346809221517 13/2993 1/72 NA NA tRNA processing YDL051W GO:0015986 0.00434346809221517 13/2993 1/72 NA NA ATP synthesis coupled proton transport YPL271W GO:0006446 0.00300701637153358 9/2993 1/72 NA NA regulation of translational initiation YPR041W GO:0000086 0.00735048446374875 22/2993 1/72 NA NA G2/M transition of mitotic cell cycle YOL133W GO:0048025 0.000334112930170398 1/2993 1/72 NA NA negative regulation of nuclear mRNA splicing, via spliceosome YGL030W GO:0030490 0.0106916137654527 32/2993 1/72 NA NA processing of 20S pre-rRNA YML093W GO:0006383 0.00701637153357835 21/2993 2/72 0.0893463109953087 1 transcription from RNA polymerase III promoter YOR224C YPR110C GO:0046513 0.000668225860340795 2/2993 1/72 NA NA ceramide biosynthetic process YHL003C GO:0000723 0.0547945205479452 164/2993 7/72 0.0965696502408974 1 telomere maintenance YDL081C YDR300C YDR418W YDR443C YER070W YJL190C YKR059W Total number of genes: 2993 Total number of Study genes: 72 Total number of Study gene GMRG terms (pop non-singletons): 64 (60) Genes with GMRG information: 71 Genes with no GMRG information: 1 These are: YFR031C-A Bicluster # 3 GeneMerge v1.2; C:\AGO\AGB_FV_Sin_Traslape\GOAGB_FV_Sin_Traslapecluster3.txt Gene Association File: S_cerevisiae.BP Description File: GO.BP.use Population File: pop.txt Study File: C:\AGO\AGB_FV_Sin_Traslape\AGB_FV_Sin_Traslapecluster3.txt GMRG_Term Pop_freq Pop_frac Study_frac Raw_es e-score Description Contributing_genes GO:0030489 0.00233879051119278 7/2993 1/57 NA NA processing of 27S pre-rRNA YGL120C GO:0006360 0.00801871032408954 24/2993 1/57 NA NA transcription from RNA polymerase I promoter YJR063W GO:0000162 0.00334112930170398 10/2993 1/57 NA NA tryptophan biosynthetic process YHL011C GO:0008654 0.00434346809221517 13/2993 1/57 NA NA phospholipid biosynthetic process YPR140W GO:0001403 0.0100233879051119 30/2993 1/57 NA NA invasive growth (sensu Saccharomyces) YGL208W GO:0006623 0.00668225860340795 20/2993 1/57 NA NA protein targeting to vacuole YPR185W GO:0006914 0.00267290344136318 8/2993 1/57 NA NA autophagy YPR185W GO:0042273 0.00200467758102239 6/2993 1/57 NA NA ribosomal large subunit biogenesis and assembly YGL120C GO:0000032 0.00267290344136318 8/2993 1/57 NA NA cell wall mannoprotein biosynthetic process YDR245W GO:0006432 0.000668225860340795 2/2993 1/57 NA NA phenylalanyl-tRNA aminoacylation YFL022C GO:0007165 0.00935516204477113 28/2993 1/57 NA NA signal transduction YGL208W GO:0030148 0.00501169395255596 15/2993 1/57 NA NA sphingolipid biosynthetic process YLR372W GO:0000027 0.0100233879051119 30/2993 4/57 0.0022411232264075 0.177048734886192 ribosomal large subunit assembly and maintenance YEL054C YFL002C YLR276C YML073C GO:0006364 0.0106916137654527 32/2993 2/57 0.123010008569586 1 rRNA processing YGL120C YNL302C GO:0042144 0.00434346809221517 13/2993 1/57 NA NA vacuole fusion, non-autophagic YML001W GO:0006348 0.0133645172068159 40/2993 1/57 NA NA chromatin silencing at telomere YDL084W GO:0006979 0.0126962913464751 38/2993 1/57 NA NA response to oxidative stress YKL026C GO:0030497 0.00100233879051119 3/2993 1/57 NA NA fatty acid elongation YLR372W GO:0000370 0.00100233879051119 3/2993 1/57 NA NA U2-type nuclear mRNA branch site recognition YDL084W GO:0001302 0.00701637153357835 21/2993 1/57 NA NA replicative cell aging YGL208W GO:0045944 0.0160374206481791 48/2993 1/57 NA NA positive regulation of transcription from RNA polymerase II promoter YHR006W GO:0009743 0.000334112930170398 1/2993 1/57 NA NA response to carbohydrate stimulus YOR113W GO:0006412 0.0811894420314066 243/2993 20/57 5.72294763248457e-009 4.52112862966281e-007 translation YBL087C YBR031W YBR048W YDL202W YDR025W YEL054C YER102W YGL103W YGR027C YHL015W YIL018W YJL177W YJL190C YKL006W YKL180W YKR057W YLR029C YLR264W YML073C YNL302C GO:0006606 0.00735048446374875 22/2993 1/57 NA NA protein import into nucleus YMR235C GO:0006487 0.0100233879051119 30/2993 1/57 NA NA protein amino acid N-linked glycosylation YJL002C GO:0006431 0.00100233879051119 3/2993 1/57 NA NA methionyl-tRNA aminoacylation YGR264C GO:0008150 0.0180420982292015 54/2993 1/57 NA NA biological_process YHL015W GO:0016072 0.000668225860340795 2/2993 1/57 NA NA rRNA metabolic process YMR235C GO:0009072 0.000668225860340795 2/2993 1/57 NA NA aromatic amino acid family metabolic process YGL202W GO:0008202 0.000668225860340795 2/2993 1/57 NA NA steroid metabolic process YGR177C GO:0000391 0.00100233879051119 3/2993 1/57 NA NA U2-dependent spliceosome disassembly YGL120C GO:0042254 0.0370865352489141 111/2993 8/57 0.00100715131770717 0.0795649540988663 ribosome biogenesis and assembly YEL026W YFL002C YGL120C YHL011C YHR196W YJR063W YLR276C YPR144C GO:0006633 0.00167056465085199 5/2993 1/57 NA NA fatty acid biosynthetic process YLR372W GO:0006404 0.000334112930170398 1/2993 1/57 NA NA RNA import into nucleus YMR235C GO:0007117 0.00434346809221517 13/2993 1/57 NA NA budding cell bud growth YDR507C GO:0006591 0.000334112930170398 1/2993 1/57 NA NA ornithine metabolic process YJL088W GO:0007007 0.000334112930170398 1/2993 1/57 NA NA inner mitochondrial membrane organization and biogenesis YPR140W GO:0007569 0.000668225860340795 2/2993 1/57 NA NA cell aging YGL208W GO:0000054 0.00167056465085199 5/2993 1/57 NA NA ribosome export from nucleus YMR235C GO:0006407 0.00868693618443034 26/2993 1/57 NA NA rRNA export from nucleus YMR235C GO:0006415 0.00100233879051119 3/2993 1/57 NA NA translational termination YBR143C GO:0006365 0.0200467758102239 60/2993 5/57 0.00515178528620589 0.406991037610266 35S primary transcript processing YFL002C YGL120C YGR158C YLR276C YPR144C GO:0008645 0.00534580688272636 16/2993 1/57 NA NA hexose transport YHR096C GO:0006402 0.00968927497494153 29/2993 1/57 NA NA mRNA catabolic process YGR158C GO:0030490 0.0106916137654527 32/2993 3/57 0.0219744440771549 1 processing of 20S pre-rRNA YEL026W YGL120C YHR196W GO:0006338 0.0106916137654527 32/2993 1/57 NA NA chromatin remodeling YLR095C GO:0006526 0.00334112930170398 10/2993 1/57 NA NA arginine biosynthetic process YJL088W GO:0007015 0.0163715335783495 49/2993 1/57 NA NA actin filament organization YDR245W GO:0000105 0.00467758102238557 14/2993 2/57 0.0280041679179047 1 histidine biosynthetic process YHL011C YIL020C GO:0000921 0.000668225860340795 2/2993 1/57 NA NA septin ring assembly YDR507C GO:0009086 0.00200467758102239 6/2993 1/57 NA NA methionine biosynthetic process YGL184C GO:0006080 0.000668225860340795 2/2993 1/57 NA NA mannan metabolic process YDR245W GO:0015802 0.00133645172068159 4/2993 1/57 NA NA basic amino acid transport YNL268W GO:0042493 0.021049114600735 63/2993 1/57 NA NA response to drug YIL018W GO:0000398 0.0173738723688607 52/2993 2/57 0.260527664398037 1 nuclear mRNA splicing, via spliceosome YDL084W YEL026W GO:0008361 0.00634814567323755 19/2993 1/57 NA NA regulation of cell size YHL011C GO:0000056 0.00133645172068159 4/2993 1/57 NA NA ribosomal small subunit export from nucleus YNL302C GO:0006468 0.0304042766455062 91/2993 2/57 0.52251896892097 1 protein amino acid phosphorylation YDR507C YGL208W GO:0000910 0.0113598396257935 34/2993 1/57 NA NA cytokinesis YBR143C GO:0000135 0.00133645172068159 4/2993 1/57 NA NA septin checkpoint YDR507C GO:0000002 0.00701637153357835 21/2993 1/57 NA NA mitochondrial genome maintenance YBR192W GO:0006207 0.00167056465085199 5/2993 1/57 NA NA 'de novo' pyrimidine base biosynthetic process YHL011C GO:0006461 0.00601403274306716 18/2993 1/57 NA NA protein complex assembly YPR140W GO:0006406 0.0136986301369863 41/2993 1/57 NA NA mRNA export from nucleus YDL084W GO:0006896 0.00233879051119278 7/2993 1/57 NA NA Golgi to vacuole transport YML001W GO:0006830 0.000334112930170398 1/2993 1/57 NA NA high-affinity zinc ion transport YGL255W GO:0006355 0.00768459739391914 23/2993 1/57 NA NA regulation of transcription, DNA-dependent YOR113W GO:0006166 0.00167056465085199 5/2993 1/57 NA NA purine ribonucleoside salvage YHL011C GO:0006414 0.00534580688272636 16/2993 1/57 NA NA translational elongation YPR080W GO:0042274 0.00233879051119278 7/2993 2/57 0.00703881839967636 0.556066653574433 ribosomal small subunit biogenesis and assembly YNL302C YPR144C GO:0006450 0.00334112930170398 10/2993 2/57 0.014539514995211 1 regulation of translational fidelity YBR048W YDR025W GO:0032048 0.000334112930170398 1/2993 1/57 NA NA cardiolipin metabolic process YPR140W GO:0042149 0.00133645172068159 4/2993 1/57 NA NA cellular response to glucose starvation YGL208W GO:0016192 0.00968927497494153 29/2993 1/57 NA NA vesicle-mediated transport YML001W GO:0000028 0.00367524223187437 11/2993 2/57 0.0175549724934637 1 ribosomal small subunit assembly and maintenance YBR048W YDR025W GO:0006897 0.0183762111593719 55/2993 1/57 NA NA endocytosis YML001W GO:0000011 0.00467758102238557 14/2993 1/57 NA NA vacuole inheritance YML001W GO:0006864 0.000334112930170398 1/2993 1/57 NA NA pyrimidine nucleotide transport YBR192W GO:0018279 0.000668225860340795 2/2993 1/57 NA NA protein amino acid N-linked glycosylation via asparagine YJL002C GO:0006409 0.00902104911460073 27/2993 1/57 NA NA tRNA export from nucleus YPR080W GO:0006189 0.00200467758102239 6/2993 1/57 NA NA 'de novo' IMP biosynthetic process YHL011C GO:0006491 0.00133645172068159 4/2993 1/57 NA NA N-glycan processing YDR245W GO:0007120 0.00534580688272636 16/2993 1/57 NA NA axial bud site selection YDR507C GO:0006446 0.00300701637153358 9/2993 1/57 NA NA regulation of translational initiation YLR291C GO:0006892 0.00100233879051119 3/2993 1/57 NA NA post-Golgi vesicle-mediated transport YLR372W GO:0042775 0.000334112930170398 1/2993 1/57 NA NA ATP synthesis coupled electron transport (sensu Eukaryota) YPR140W GO:0000723 0.0547945205479452 164/2993 7/57 0.0341039489513549 1 telomere maintenance YBR048W YHL011C YJL190C YKR057W YLR264W YLR372W YML001W Total number of genes: 2993 Total number of Study genes: 57 Total number of Study gene GMRG terms (pop non-singletons): 87 (79) Genes with GMRG information: 57 Genes with no GMRG information: These are: Bicluster # 4 GeneMerge v1.2; C:\AGO\AGB_FV_Sin_Traslape\GOAGB_FV_Sin_Traslapecluster4.txt Gene Association File: S_cerevisiae.BP Description File: GO.BP.use Population File: pop.txt Study File: C:\AGO\AGB_FV_Sin_Traslape\AGB_FV_Sin_Traslapecluster4.txt GMRG_Term Pop_freq Pop_frac Study_frac Raw_es e-score Description Contributing_genes GO:0007124 0.0167056465085199 50/2993 2/60 0.265033650061219 1 pseudohyphal growth YER118C YOR032C GO:0030489 0.00233879051119278 7/2993 1/60 NA NA processing of 27S pre-rRNA YKR081C GO:0006096 0.00534580688272636 16/2993 2/60 0.0396034201242521 1 glycolysis YGR192C YHR174W GO:0006268 0.00400935516204477 12/2993 1/60 NA NA DNA unwinding during replication YGL113W GO:0006066 0.000668225860340795 2/2993 1/60 NA NA alcohol metabolic process YER024W GO:0009082 0.00233879051119278 7/2993 1/60 NA NA branched chain family amino acid biosynthetic process YER086W GO:0006623 0.00668225860340795 20/2993 1/60 NA NA protein targeting to vacuole YNL093W GO:0000096 0.00200467758102239 6/2993 1/60 NA NA sulfur amino acid metabolic process YPL273W GO:0000032 0.00267290344136318 8/2993 1/60 NA NA cell wall mannoprotein biosynthetic process YDL055C GO:0006605 0.00167056465085199 5/2993 1/60 NA NA protein targeting YGL178W GO:0006094 0.00467758102238557 14/2993 2/60 0.030810065404812 1 gluconeogenesis YGR192C YHR174W GO:0000027 0.0100233879051119 30/2993 5/60 0.000265317122088805 0.0193681499124828 ribosomal large subunit assembly and maintenance YDL031W YDR418W YGR085C YKR081C YML073C GO:0006364 0.0106916137654527 32/2993 2/60 0.133800263411767 1 rRNA processing YER006W YLR002C GO:0009298 0.000668225860340795 2/2993 1/60 NA NA GDP-mannose biosynthetic process YDL055C GO:0006413 0.00935516204477113 28/2993 3/60 0.0175760509899858 1 translational initiation YGR054W YKR059W YPR163C GO:0006555 0.00467758102238557 14/2993 2/60 0.030810065404812 1 methionine metabolic process YER052C YHR025W GO:0001302 0.00701637153357835 21/2993 1/60 NA NA replicative cell aging YGL178W GO:0009090 0.00100233879051119 3/2993 1/60 NA NA homoserine biosynthetic process YER052C GO:0006412 0.0811894420314066 243/2993 23/60 4.68021318777149e-011 3.41655562707319e-009 translation YDR418W YDR447C YER102W YER117W YGL031C YGR085C YGR118W YGR148C YHR010W YIL133C YJL177W YJL190C YKL006W YKL180W YLR192C YLR264W YLR388W YML073C YMR142C YNL096C YNL178W YPL220W YPR043W GO:0000147 0.00400935516204477 12/2993 1/60 NA NA actin cortical patch assembly YIL095W GO:0006486 0.00634814567323755 19/2993 1/60 NA NA protein amino acid glycosylation YDL055C GO:0006616 0.00267290344136318 8/2993 1/60 NA NA SRP-dependent cotranslational protein targeting to membrane, translocation YLR378C GO:0030473 0.00334112930170398 10/2993 1/60 NA NA nuclear migration, microtubule-mediated YML124C GO:0009228 0.00400935516204477 12/2993 1/60 NA NA thiamin biosynthetic process YMR096W GO:0042254 0.0370865352489141 111/2993 4/60 0.181006388167025 1 ribosome biogenesis and assembly YDL031W YER006W YKR081C YLR002C GO:0045047 0.00267290344136318 8/2993 1/60 NA NA protein targeting to ER YLR378C GO:0009092 0.00100233879051119 3/2993 1/60 NA NA homoserine metabolic process YHR025W GO:0000321 0.00100233879051119 3/2993 1/60 NA NA re-entry into mitotic cell cycle after pheromone arrest YGL178W GO:0006740 0.00100233879051119 3/2993 1/60 NA NA NADPH regeneration YNL009W GO:0006529 0.000668225860340795 2/2993 1/60 NA NA asparagine biosynthetic process YGR124W GO:0006415 0.00100233879051119 3/2993 1/60 NA NA translational termination YBR143C GO:0042147 0.00267290344136318 8/2993 1/60 NA NA retrograde transport, endosome to Golgi YLR039C GO:0006365 0.0200467758102239 60/2993 2/60 0.339791245503448 1 35S primary transcript processing YDL031W YGR195W GO:0000288 0.00367524223187437 11/2993 1/60 NA NA mRNA catabolic process, deadenylation-dependent decay YGL178W GO:0006566 0.00167056465085199 5/2993 2/60 0.00380194302489593 0.277541840817403 threonine metabolic process YER052C YHR025W GO:0006402 0.00968927497494153 29/2993 1/60 NA NA mRNA catabolic process YGR195W GO:0009437 0.00100233879051119 3/2993 1/60 NA NA carnitine metabolic process YER024W GO:0030490 0.0106916137654527 32/2993 1/60 NA NA processing of 20S pre-rRNA YLR192C GO:0000079 0.00467758102238557 14/2993 1/60 NA NA regulation of cyclin-dependent protein kinase activity YBL056W GO:0007035 0.00534580688272636 16/2993 1/60 NA NA vacuolar acidification YOR270C GO:0007015 0.0163715335783495 49/2993 1/60 NA NA actin filament organization YIL095W GO:0001308 0.00233879051119278 7/2993 1/60 NA NA loss of chromatin silencing during replicative cell aging YGL178W GO:0031204 0.00100233879051119 3/2993 1/60 NA NA posttranslational protein targeting to membrane, translocation YLR378C GO:0000743 0.00100233879051119 3/2993 1/60 NA NA nuclear migration during conjugation with cellular fusion YML124C GO:0006008 0.000668225860340795 2/2993 1/60 NA NA glucose 1-phosphate utilization YKL127W GO:0042493 0.021049114600735 63/2993 2/60 0.361868020359609 1 response to drug YER052C YER117W GO:0006090 0.00167056465085199 5/2993 1/60 NA NA pyruvate metabolic process YLR134W GO:0045143 0.00100233879051119 3/2993 1/60 NA NA homologous chromosome segregation YML124C GO:0006468 0.0304042766455062 91/2993 1/60 NA NA protein amino acid phosphorylation YIL095W GO:0000910 0.0113598396257935 34/2993 2/60 0.147620868165301 1 cytokinesis YBR143C YIL095W GO:0006270 0.00835282325425994 25/2993 2/60 0.0883364680564178 1 DNA replication initiation YGL113W YLR002C GO:0007232 0.000334112930170398 1/2993 1/60 NA NA osmosensory signaling pathway via Sho1 osmosensor YER118C GO:0008614 0.00133645172068159 4/2993 1/60 NA NA pyridoxine metabolic process YMR096W GO:0007047 0.021049114600735 63/2993 1/60 NA NA cell wall organization and biogenesis YGL178W GO:0006886 0.00467758102238557 14/2993 1/60 NA NA intracellular protein transport YLR039C GO:0006508 0.00534580688272636 16/2993 1/60 NA NA proteolysis YHR047C GO:0006461 0.00601403274306716 18/2993 1/60 NA NA protein complex assembly YOR270C GO:0006830 0.000334112930170398 1/2993 1/60 NA NA high-affinity zinc ion transport YGL255W GO:0030100 0.00100233879051119 3/2993 1/60 NA NA regulation of endocytosis YIL095W GO:0043330 0.00233879051119278 7/2993 1/60 NA NA response to exogenous dsRNA YGR195W GO:0006450 0.00334112930170398 10/2993 1/60 NA NA regulation of translational fidelity YGR118W GO:0000070 0.0100233879051119 30/2993 1/60 NA NA mitotic sister chromatid segregation YML124C GO:0000028 0.00367524223187437 11/2993 1/60 NA NA ribosomal small subunit assembly and maintenance YDR447C GO:0005977 0.00400935516204477 12/2993 1/60 NA NA glycogen metabolic process YHR047C GO:0006635 0.00300701637153358 9/2993 1/60 NA NA fatty acid beta-oxidation YNL009W GO:0006797 0.000334112930170398 1/2993 1/60 NA NA polyphosphate metabolic process YOR270C GO:0015914 0.00167056465085199 5/2993 1/60 NA NA phospholipid transport YJL145W GO:0006102 0.00167056465085199 5/2993 1/60 NA NA isocitrate metabolic process YNL009W GO:0006897 0.0183762111593719 55/2993 1/60 NA NA endocytosis YNL093W GO:0006470 0.00902104911460073 27/2993 1/60 NA NA protein amino acid dephosphorylation YBL056W GO:0006974 0.00768459739391914 23/2993 1/60 NA NA response to DNA damage stimulus YNL178W GO:0019655 0.00167056465085199 5/2993 1/60 NA NA glucose catabolic process to ethanol YLR134W GO:0006549 0.000334112930170398 1/2993 1/60 NA NA isoleucine metabolic process YHR025W GO:0006010 0.000668225860340795 2/2993 1/60 NA NA glucose 6-phosphate utilization YKL127W GO:0006424 0.000668225860340795 2/2993 1/60 NA NA glutamyl-tRNA aminoacylation YGL245W GO:0000173 0.00167056465085199 5/2993 1/60 NA NA inactivation of MAPK activity during osmolarity sensing YBL056W GO:0000723 0.0547945205479452 164/2993 8/60 0.0152764244801678 1 telomere maintenance YDR418W YDR447C YGR118W YJL190C YKR059W YLR192C YLR264W YMR142C Total number of genes: 2993 Total number of Study genes: 60 Total number of Study gene GMRG terms (pop non-singletons): 77 (73) Genes with GMRG information: 60 Genes with no GMRG information: These are: Bicluster # 5 GeneMerge v1.2; C:\AGO\AGB_FV_Sin_Traslape\GOAGB_FV_Sin_Traslapecluster5.txt Gene Association File: S_cerevisiae.BP Description File: GO.BP.use Population File: pop.txt Study File: C:\AGO\AGB_FV_Sin_Traslape\AGB_FV_Sin_Traslapecluster5.txt GMRG_Term Pop_freq Pop_frac Study_frac Raw_es e-score Description Contributing_genes GO:0007124 0.0167056465085199 50/2993 2/77 0.370434420062603 1 pseudohyphal growth YLR229C YPL203W GO:0030489 0.00233879051119278 7/2993 2/77 0.01261791515431 0.958961551727559 processing of 27S pre-rRNA YCL054W YGL246C GO:0030437 0.0113598396257935 34/2993 1/77 NA NA sporulation (sensu Fungi) YNL307C GO:0005981 0.00133645172068159 4/2993 1/77 NA NA regulation of glycogen catabolic process YPL219W GO:0008654 0.00434346809221517 13/2993 1/77 NA NA phospholipid biosynthetic process YBL039C GO:0001403 0.0100233879051119 30/2993 1/77 NA NA invasive growth (sensu Saccharomyces) YLR229C GO:0030846 0.00267290344136318 8/2993 1/77 NA NA transcription termination from Pol II promoter, RNA polymerase(A) coupled YGL246C GO:0046685 0.00233879051119278 7/2993 1/77 NA NA response to arsenic YDL020C GO:0006457 0.00868693618443034 26/2993 2/77 0.143010477926683 1 protein folding YJL014W YJR064W GO:0045941 0.00267290344136318 8/2993 1/77 NA NA positive regulation of transcription YDL020C GO:0000027 0.0100233879051119 30/2993 4/77 0.00667924605356124 0.507622700070655 ribosomal large subunit assembly and maintenance YEL054C YGL078C YGR085C YPR102C GO:0006364 0.0106916137654527 32/2993 2/77 0.198324937459541 1 rRNA processing YER006W YMR229C GO:0000290 0.00233879051119278 7/2993 1/77 NA NA deadenylation-dependent decapping YJL124C GO:0006413 0.00935516204477113 28/2993 3/77 0.0338048301683951 1 translational initiation YJL138C YMR309C YOR361C GO:0006979 0.0126962913464751 38/2993 1/77 NA NA response to oxidative stress YKL026C GO:0007266 0.00467758102238557 14/2993 1/77 NA NA Rho protein signal transduction YLR229C GO:0006555 0.00467758102238557 14/2993 1/77 NA NA methionine metabolic process YDR502C GO:0045944 0.0160374206481791 48/2993 1/77 NA NA positive regulation of transcription from RNA polymerase II promoter YKL020C GO:0006412 0.0811894420314066 243/2993 25/77 4.24427294116724e-010 3.2256474352871e-008 translation YBL092W YBR031W YBR048W YCR003W YDR025W YDR341C YEL054C YER131W YGL076C YGL135W YGR085C YHR064C YJL189W YJL190C YLL045C YLR048W YLR192C YMR242C YNL069C YNL301C YOR167C YOR312C YPL090C YPL220W YPR102C GO:0006606 0.00735048446374875 22/2993 1/77 NA NA protein import into nucleus YMR308C GO:0006431 0.00100233879051119 3/2993 1/77 NA NA methionyl-tRNA aminoacylation YGR264C GO:0007533 0.000668225860340795 2/2993 1/77 NA NA mating type switching YOR191W GO:0007096 0.00601403274306716 18/2993 1/77 NA NA regulation of exit from mitosis YLR229C GO:0006570 0.000334112930170398 1/2993 1/77 NA NA tyrosine metabolic process YBR166C GO:0006396 0.00200467758102239 6/2993 1/77 NA NA RNA processing YLR107W GO:0006486 0.00634814567323755 19/2993 2/77 0.0842751372767415 1 protein amino acid glycosylation YEL042W YJL183W GO:0006333 0.00668225860340795 20/2993 1/77 NA NA chromatin assembly or disassembly YOR191W GO:0007059 0.00902104911460073 27/2993 1/77 NA NA chromosome segregation YDR254W GO:0030468 0.0140327430671567 42/2993 1/77 NA NA establishment of cell polarity (sensu Fungi) YLR229C GO:0000302 0.000334112930170398 1/2993 1/77 NA NA response to reactive oxygen species YGR088W GO:0009228 0.00400935516204477 12/2993 1/77 NA NA thiamin biosynthetic process YPL214C GO:0031167 0.000668225860340795 2/2993 1/77 NA NA rRNA methylation YCL054W GO:0007118 0.00367524223187437 11/2993 1/77 NA NA budding cell apical bud growth YLR229C GO:0042254 0.0370865352489141 111/2993 10/77 0.00044428760580907 0.0337658580414893 ribosome biogenesis and assembly YER006W YGR128C YHR196W YLR249W YLR409C YML093W YMR229C YMR309C YOR243C YOR312C GO:0006883 0.000668225860340795 2/2993 1/77 NA NA sodium ion homeostasis YDR436W GO:0006810 0.0147009689274975 44/2993 1/77 NA NA transport YNL125C GO:0040031 0.000334112930170398 1/2993 1/77 NA NA snRNA modification YOR243C GO:0000715 0.00233879051119278 7/2993 1/77 NA NA nucleotide-excision repair, DNA damage recognition YER162C GO:0006365 0.0200467758102239 60/2993 3/77 0.199365146961762 1 35S primary transcript processing YGL078C YLR409C YMR229C GO:0000288 0.00367524223187437 11/2993 1/77 NA NA mRNA catabolic process, deadenylation-dependent decay YJL124C GO:0006429 0.000668225860340795 2/2993 1/77 NA NA leucyl-tRNA aminoacylation YPL160W GO:0008645 0.00534580688272636 16/2993 1/77 NA NA hexose transport YMR011W GO:0006402 0.00968927497494153 29/2993 1/77 NA NA mRNA catabolic process YJL124C GO:0015833 0.000334112930170398 1/2993 1/77 NA NA peptide transport YKR093W GO:0000086 0.00735048446374875 22/2993 1/77 NA NA G2/M transition of mitotic cell cycle YDL020C GO:0007265 0.00367524223187437 11/2993 1/77 NA NA Ras protein signal transduction YPL203W GO:0006303 0.00567991981289676 17/2993 1/77 NA NA double-strand break repair via nonhomologous end joining YNL307C GO:0030490 0.0106916137654527 32/2993 5/77 0.00115613500287542 0.0878662602185319 processing of 20S pre-rRNA YGR128C YHR196W YLR192C YML093W YMR229C GO:0007035 0.00534580688272636 16/2993 1/77 NA NA vacuolar acidification YLR447C GO:0006075 0.000668225860340795 2/2993 1/77 NA NA 1,3-beta-glucan biosynthetic process YGR032W GO:0045739 0.000334112930170398 1/2993 1/77 NA NA positive regulation of DNA repair YDL020C GO:0000398 0.0173738723688607 52/2993 1/77 NA NA nuclear mRNA splicing, via spliceosome YFR005C GO:0006241 0.000668225860340795 2/2993 1/77 NA NA CTP biosynthetic process YBL039C GO:0006468 0.0304042766455062 91/2993 3/77 0.417298306736771 1 protein amino acid phosphorylation YJL141C YNL307C YPL203W GO:0007119 0.00300701637153358 9/2993 1/77 NA NA budding cell isotropic bud growth YLR229C GO:0006696 0.00768459739391914 23/2993 2/77 0.116844376056448 1 ergosterol biosynthetic process YGL001C YLR100W GO:0019856 0.000668225860340795 2/2993 1/77 NA NA pyrimidine base biosynthetic process YBL039C GO:0007047 0.021049114600735 63/2993 1/77 NA NA cell wall organization and biogenesis YGR032W GO:0007010 0.00467758102238557 14/2993 2/77 0.0486799742459652 1 cytoskeleton organization and biogenesis YJL014W YJR064W GO:0006400 0.00634814567323755 19/2993 2/77 0.0842751372767415 1 tRNA modification YER168C YOR243C GO:0006406 0.0136986301369863 41/2993 1/77 NA NA mRNA export from nucleus YMR308C GO:0006950 0.0180420982292015 54/2993 2/77 0.407360172559193 1 response to stress YGR088W YNL307C GO:0006414 0.00534580688272636 16/2993 1/77 NA NA translational elongation YLR249W GO:0001522 0.00100233879051119 3/2993 1/77 NA NA pseudouridine synthesis YOR243C GO:0006450 0.00334112930170398 10/2993 3/77 0.00172534578350581 0.131126279546442 regulation of translational fidelity YBR048W YDR025W YHR064C GO:0000070 0.0100233879051119 30/2993 1/77 NA NA mitotic sister chromatid segregation YNL307C GO:0000028 0.00367524223187437 11/2993 3/77 0.00232862816549424 0.176975740577562 ribosomal small subunit assembly and maintenance YBR048W YDR025W YLR048W GO:0006631 0.00400935516204477 12/2993 1/77 NA NA fatty acid metabolic process YKL020C GO:0030476 0.00567991981289676 17/2993 1/77 NA NA spore wall assembly (sensu Fungi) YGR032W GO:0031384 0.00133645172068159 4/2993 1/77 NA NA regulation of initiation of mating projection growth YLR229C GO:0007323 0.00267290344136318 8/2993 1/77 NA NA peptide pheromone maturation YJR117W GO:0006388 0.00400935516204477 12/2993 1/77 NA NA tRNA splicing YKL205W GO:0009409 0.00167056465085199 5/2993 2/77 0.00621317345945772 0.472201182918786 response to cold YGR088W YKL020C GO:0006409 0.00902104911460073 27/2993 1/77 NA NA tRNA export from nucleus YKL205W GO:0007034 0.00334112930170398 10/2993 1/77 NA NA vacuolar transport YLR447C GO:0006446 0.00300701637153358 9/2993 2/77 0.0209209868018676 1 regulation of translational initiation YJL138C YLR291C GO:0007126 0.0113598396257935 34/2993 1/77 NA NA meiosis YNL307C GO:0005979 0.00167056465085199 5/2993 1/77 NA NA regulation of glycogen biosynthetic process YPL219W GO:0045732 0.000334112930170398 1/2993 1/77 NA NA positive regulation of protein catabolic process YDL020C GO:0000750 0.00801871032408954 24/2993 1/77 NA NA pheromone-dependent signal transduction during conjugation with cellular fusion YLR229C GO:0006887 0.00601403274306716 18/2993 1/77 NA NA exocytosis YLR229C GO:0000723 0.0547945205479452 164/2993 5/77 0.415488957207159 1 telomere maintenance YBR048W YDL020C YGL135W YJL190C YLR192C Total number of genes: 2993 Total number of Study genes: 77 Total number of Study gene GMRG terms (pop non-singletons): 82 (76) Genes with GMRG information: 77 Genes with no GMRG information: These are: Bicluster # 6 GeneMerge v1.2; C:\AGO\AGB_FV_Sin_Traslape\GOAGB_FV_Sin_Traslapecluster6.txt Gene Association File: S_cerevisiae.BP Description File: GO.BP.use Population File: pop.txt Study File: C:\AGO\AGB_FV_Sin_Traslape\AGB_FV_Sin_Traslapecluster6.txt GMRG_Term Pop_freq Pop_frac Study_frac Raw_es e-score Description Contributing_genes GO:0007124 0.0167056465085199 50/2993 1/66 NA NA pseudohyphal growth YHR084W GO:0030489 0.00233879051119278 7/2993 2/66 0.00936499640805934 0.730469719828628 processing of 27S pre-rRNA YCL054W YGL120C GO:0000747 0.00467758102238557 14/2993 1/66 NA NA conjugation with cellular fusion YHR084W GO:0030437 0.0113598396257935 34/2993 1/66 NA NA sporulation (sensu Fungi) YMR139W GO:0000162 0.00334112930170398 10/2993 2/66 0.0192291404704361 1 tryptophan biosynthetic process YER090W YOL061W GO:0001403 0.0100233879051119 30/2993 1/66 NA NA invasive growth (sensu Saccharomyces) YHR084W GO:0006423 0.000334112930170398 1/2993 1/66 NA NA cysteinyl-tRNA aminoacylation YNL247W GO:0000096 0.00200467758102239 6/2993 2/66 0.00678546985549455 0.529266648728575 sulfur amino acid metabolic process YPL038W YPL273W GO:0042273 0.00200467758102239 6/2993 1/66 NA NA ribosomal large subunit biogenesis and assembly YGL120C GO:0007103 0.00334112930170398 10/2993 1/66 NA NA spindle pole body duplication in nuclear envelope YML031W GO:0006457 0.00868693618443034 26/2993 1/66 NA NA protein folding YJR064W GO:0030036 0.00567991981289676 17/2993 1/66 NA NA actin cytoskeleton organization and biogenesis YDL047W GO:0000027 0.0100233879051119 30/2993 4/66 0.00384045614013262 0.299555578930344 ribosomal large subunit assembly and maintenance YDR418W YLR340W YNR038W YOR063W GO:0006364 0.0106916137654527 32/2993 1/66 NA NA rRNA processing YGL120C GO:0006413 0.00935516204477113 28/2993 4/66 0.00296581419635152 0.231333507315419 translational initiation YJL138C YKR059W YMR146C YMR309C GO:0006979 0.0126962913464751 38/2993 1/66 NA NA response to oxidative stress YKL026C GO:0006555 0.00467758102238557 14/2993 1/66 NA NA methionine metabolic process YHR025W GO:0006534 0.000668225860340795 2/2993 1/66 NA NA cysteine metabolic process YNL247W GO:0006665 0.00200467758102239 6/2993 1/66 NA NA sphingolipid metabolic process YKL126W GO:0001302 0.00701637153357835 21/2993 1/66 NA NA replicative cell aging YDL047W GO:0006436 0.000668225860340795 2/2993 1/66 NA NA tryptophanyl-tRNA aminoacylation YOL097C GO:0006412 0.0811894420314066 243/2993 25/66 8.65242392069437e-012 6.74889065814161e-010 translation YBL072C YBR189W YDL083C YDR064W YDR341C YDR382W YDR418W YER074W YGL135W YGL147C YGR214W YHL033C YIL018W YJL190C YLR029C YLR048W YLR167W YLR185W YLR340W YMR143W YOL120C YOR063W YOR167C YOR369C YPL090C GO:0006606 0.00735048446374875 22/2993 1/66 NA NA protein import into nucleus YML031W GO:0006431 0.00100233879051119 3/2993 1/66 NA NA methionyl-tRNA aminoacylation YGR264C GO:0008150 0.0180420982292015 54/2993 1/66 NA NA biological_process YPL038W GO:0006790 0.000334112930170398 1/2993 1/66 NA NA sulfur metabolic process YFR055W GO:0006486 0.00634814567323755 19/2993 1/66 NA NA protein amino acid glycosylation YJL183W GO:0006430 0.000668225860340795 2/2993 1/66 NA NA lysyl-tRNA aminoacylation YDR037W GO:0006878 0.00200467758102239 6/2993 1/66 NA NA copper ion homeostasis YFR055W GO:0000122 0.0113598396257935 34/2993 1/66 NA NA negative regulation of transcription from RNA polymerase II promoter YDR028C GO:0031167 0.000668225860340795 2/2993 1/66 NA NA rRNA methylation YCL054W GO:0000391 0.00100233879051119 3/2993 1/66 NA NA U2-dependent spliceosome disassembly YGL120C GO:0042254 0.0370865352489141 111/2993 8/66 0.00265153117131592 0.206819431362642 ribosome biogenesis and assembly YBL024W YGL120C YGR123C YLR167W YMR093W YMR309C YNL247W YNR038W GO:0009092 0.00100233879051119 3/2993 1/66 NA NA homoserine metabolic process YHR025W GO:0006810 0.0147009689274975 44/2993 1/66 NA NA transport YLR083C GO:0006415 0.00100233879051119 3/2993 1/66 NA NA translational termination YDR172W GO:0006365 0.0200467758102239 60/2993 2/66 0.383682290248534 1 35S primary transcript processing YGL120C YNR038W GO:0000288 0.00367524223187437 11/2993 1/66 NA NA mRNA catabolic process, deadenylation-dependent decay YDR172W GO:0030488 0.00367524223187437 11/2993 1/66 NA NA tRNA methylation YBL024W GO:0008645 0.00534580688272636 16/2993 2/66 0.0471108559405949 1 hexose transport YHR096C YOL156W GO:0006566 0.00167056465085199 5/2993 1/66 NA NA threonine metabolic process YHR025W GO:0007020 0.00768459739391914 23/2993 1/66 NA NA microtubule nucleation YML031W GO:0007039 0.00233879051119278 7/2993 1/66 NA NA vacuolar protein catabolic process YDR028C GO:0030490 0.0106916137654527 32/2993 2/66 0.155997999194559 1 processing of 20S pre-rRNA YGL120C YMR093W GO:0006879 0.00668225860340795 20/2993 1/66 NA NA iron ion homeostasis YKL134C GO:0000105 0.00467758102238557 14/2993 2/66 0.0367459344408492 1 histidine biosynthetic process YER055C YOL061W GO:0042493 0.021049114600735 63/2993 1/66 NA NA response to drug YIL018W GO:0006090 0.00167056465085199 5/2993 1/66 NA NA pyruvate metabolic process YLR044C GO:0006468 0.0304042766455062 91/2993 3/66 0.325055218516062 1 protein amino acid phosphorylation YDL047W YKL126W YMR139W GO:0007047 0.021049114600735 63/2993 1/66 NA NA cell wall organization and biogenesis YDL047W GO:0006508 0.00534580688272636 16/2993 1/66 NA NA proteolysis YMR139W GO:0007010 0.00467758102238557 14/2993 1/66 NA NA cytoskeleton organization and biogenesis YJR064W GO:0000082 0.0103575008352823 31/2993 1/66 NA NA G1/S transition of mitotic cell cycle YDL047W GO:0006207 0.00167056465085199 5/2993 1/66 NA NA 'de novo' pyrimidine base biosynthetic process YOL061W GO:0045449 0.00200467758102239 6/2993 1/66 NA NA regulation of transcription YPL038W GO:0016575 0.00634814567323755 19/2993 1/66 NA NA histone deacetylation YMR053C GO:0006627 0.00167056465085199 5/2993 1/66 NA NA mitochondrial protein processing YKL134C GO:0006166 0.00167056465085199 5/2993 1/66 NA NA purine ribonucleoside salvage YOL061W GO:0006950 0.0180420982292015 54/2993 1/66 NA NA response to stress YMR139W GO:0016567 0.00968927497494153 29/2993 2/66 0.133048442961726 1 protein ubiquitination YIL038C YLR167W GO:0006414 0.00534580688272636 16/2993 2/66 0.0471108559405949 1 translational elongation YDR382W YLR340W GO:0006450 0.00334112930170398 10/2993 1/66 NA NA regulation of translational fidelity YBR189W GO:0006405 0.00167056465085199 5/2993 1/66 NA NA RNA export from nucleus YML031W GO:0009396 0.00133645172068159 4/2993 1/66 NA NA folic acid and derivative biosynthetic process YNL256W GO:0007243 0.00100233879051119 3/2993 1/66 NA NA protein kinase cascade YDL047W GO:0006357 0.0203808887403943 61/2993 1/66 NA NA regulation of transcription from RNA polymerase II promoter YIL038C GO:0000028 0.00367524223187437 11/2993 3/66 0.00148954263082796 0.116184325204581 ribosomal small subunit assembly and maintenance YGR214W YLR048W YLR167W GO:0005977 0.00400935516204477 12/2993 1/66 NA NA glycogen metabolic process YDR028C GO:0000289 0.00233879051119278 7/2993 1/66 NA NA poly(A) tail shortening YIL038C GO:0006631 0.00400935516204477 12/2993 1/66 NA NA fatty acid metabolic process YOR100C GO:0006897 0.0183762111593719 55/2993 1/66 NA NA endocytosis YKL126W GO:0006109 0.00267290344136318 8/2993 1/66 NA NA regulation of carbohydrate metabolic process YDR028C GO:0006470 0.00902104911460073 27/2993 1/66 NA NA protein amino acid dephosphorylation YGR123C GO:0019655 0.00167056465085199 5/2993 1/66 NA NA glucose catabolic process to ethanol YLR044C GO:0006281 0.0160374206481791 48/2993 1/66 NA NA DNA repair YDL047W GO:0042219 0.000334112930170398 1/2993 1/66 NA NA amino acid derivative catabolic process YKL218C GO:0006549 0.000334112930170398 1/2993 1/66 NA NA isoleucine metabolic process YHR025W GO:0006189 0.00200467758102239 6/2993 1/66 NA NA 'de novo' IMP biosynthetic process YOL061W GO:0006446 0.00300701637153358 9/2993 1/66 NA NA regulation of translational initiation YJL138C GO:0007329 0.00133645172068159 4/2993 1/66 NA NA positive regulation of transcription from RNA polymerase II promoter by pheromones YHR084W GO:0006888 0.0106916137654527 32/2993 1/66 NA NA ER to Golgi vesicle-mediated transport YER074W GO:0000723 0.0547945205479452 164/2993 8/66 0.0259781801079368 1 telomere maintenance YDL047W YDL083C YDR418W YGL135W YJL190C YKR059W YMR143W YOL061W Total number of genes: 2993 Total number of Study genes: 66 Total number of Study gene GMRG terms (pop non-singletons): 82 (78) Genes with GMRG information: 66 Genes with no GMRG information: These are: Bicluster # 7 GeneMerge v1.2; C:\AGO\AGB_FV_Sin_Traslape\GOAGB_FV_Sin_Traslapecluster7.txt Gene Association File: S_cerevisiae.BP Description File: GO.BP.use Population File: pop.txt Study File: C:\AGO\AGB_FV_Sin_Traslape\AGB_FV_Sin_Traslapecluster7.txt GMRG_Term Pop_freq Pop_frac Study_frac Raw_es e-score Description Contributing_genes GO:0000132 0.00267290344136318 8/2993 1/63 NA NA establishment of mitotic spindle orientation YFL039C GO:0030489 0.00233879051119278 7/2993 1/63 NA NA processing of 27S pre-rRNA YGL120C GO:0030437 0.0113598396257935 34/2993 1/63 NA NA sporulation (sensu Fungi) YFL039C GO:0006607 0.00768459739391914 23/2993 1/63 NA NA NLS-bearing substrate import into nucleus YKR082W GO:0030037 0.00133645172068159 4/2993 1/63 NA NA actin filament reorganization during cell cycle YFL039C GO:0006408 0.00768459739391914 23/2993 1/63 NA NA snRNA export from nucleus YKR082W GO:0006360 0.00801871032408954 24/2993 1/63 NA NA transcription from RNA polymerase I promoter YPR110C GO:0000055 0.00200467758102239 6/2993 1/63 NA NA ribosomal large subunit export from nucleus YHR170W GO:0006390 0.000668225860340795 2/2993 1/63 NA NA transcription from mitochondrial promoter YFL036W GO:0006423 0.000334112930170398 1/2993 1/63 NA NA cysteinyl-tRNA aminoacylation YNL247W GO:0015883 0.000334112930170398 1/2993 1/63 NA NA FAD transport YIL134W GO:0006609 0.00768459739391914 23/2993 1/63 NA NA mRNA-binding (hnRNP) protein import into nucleus YKR082W GO:0042273 0.00200467758102239 6/2993 1/63 NA NA ribosomal large subunit biogenesis and assembly YGL120C GO:0006122 0.00233879051119278 7/2993 1/63 NA NA mitochondrial electron transport, ubiquinol to cytochrome c YEL024W GO:0050000 0.00133645172068159 4/2993 1/63 NA NA chromosome localization YKR082W GO:0000184 0.00200467758102239 6/2993 1/63 NA NA mRNA catabolic process, nonsense-mediated decay YNL112W GO:0030148 0.00501169395255596 15/2993 1/63 NA NA sphingolipid biosynthetic process YLR372W GO:0000027 0.0100233879051119 30/2993 4/63 0.00324113589014543 0.291702230113088 ribosomal large subunit assembly and maintenance YDL014W YGR085C YHR170W YLR340W GO:0006364 0.0106916137654527 32/2993 1/63 NA NA rRNA processing YGL120C GO:0006413 0.00935516204477113 28/2993 2/63 0.116290829890828 1 translational initiation YJL138C YJR007W GO:0009306 0.00133645172068159 4/2993 1/63 NA NA protein secretion YFL039C GO:0006534 0.000668225860340795 2/2993 1/63 NA NA cysteine metabolic process YNL247W GO:0030497 0.00100233879051119 3/2993 1/63 NA NA fatty acid elongation YLR372W GO:0045944 0.0160374206481791 48/2993 1/63 NA NA positive regulation of transcription from RNA polymerase II promoter YKL020C GO:0006418 0.000334112930170398 1/2993 1/63 NA NA tRNA aminoacylation for protein translation YGL105W GO:0006261 0.00601403274306716 18/2993 1/63 NA NA DNA-dependent DNA replication YMR001C GO:0006412 0.0811894420314066 243/2993 26/63 2.92844137027408e-013 2.63559723324667e-011 translation YBL072C YBR181C YBR191W YCR003W YDL219W YDR341C YDR471W YGL103W YGR085C YHR141C YIL018W YIL133C YJL189W YKL006W YLL018C YLL045C YLR048W YLR333C YLR340W YLR344W YMR143W YMR194W YNL069C YNL096C YNL301C YPL198W GO:0007096 0.00601403274306716 18/2993 1/63 NA NA regulation of exit from mitosis YML064C GO:0008150 0.0180420982292015 54/2993 1/63 NA NA biological_process YMR001C GO:0030150 0.00501169395255596 15/2993 1/63 NA NA protein import into mitochondrial matrix YOR232W GO:0030050 0.000668225860340795 2/2993 1/63 NA NA vesicle transport along actin filament YFL039C GO:0006629 0.00367524223187437 11/2993 1/63 NA NA lipid metabolic process YDR058C GO:0001300 0.00167056465085199 5/2993 1/63 NA NA chronological cell aging YFL039C GO:0006970 0.0103575008352823 31/2993 1/63 NA NA response to osmotic stress YFL039C GO:0030468 0.0140327430671567 42/2993 1/63 NA NA establishment of cell polarity (sensu Fungi) YFL039C GO:0006999 0.00835282325425994 25/2993 1/63 NA NA nuclear pore organization and biogenesis YKR082W GO:0008535 0.00133645172068159 4/2993 1/63 NA NA cytochrome c oxidase complex assembly YLL018C GO:0030473 0.00334112930170398 10/2993 1/63 NA NA nuclear migration, microtubule-mediated YML085C GO:0006110 0.000668225860340795 2/2993 1/63 NA NA regulation of glycolysis YIL107C GO:0000391 0.00100233879051119 3/2993 1/63 NA NA U2-dependent spliceosome disassembly YGL120C GO:0042254 0.0370865352489141 111/2993 9/63 0.000422636699579503 0.0380373029621553 ribosome biogenesis and assembly YDL014W YDR324C YGL120C YHR169W YHR170W YJL109C YJL125C YNL247W YPR110C GO:0000001 0.00634814567323755 19/2993 1/63 NA NA mitochondrion inheritance YFL039C GO:0006610 0.00768459739391914 23/2993 1/63 NA NA ribosomal protein import into nucleus YKR082W GO:0005993 0.00100233879051119 3/2993 1/63 NA NA trehalose catabolic process YPR026W GO:0006611 0.00935516204477113 28/2993 1/63 NA NA protein export from nucleus YKR082W GO:0006633 0.00167056465085199 5/2993 1/63 NA NA fatty acid biosynthetic process YLR372W GO:0006810 0.0147009689274975 44/2993 1/63 NA NA transport YCR011C GO:0000715 0.00233879051119278 7/2993 1/63 NA NA nucleotide-excision repair, DNA damage recognition YER162C GO:0006407 0.00868693618443034 26/2993 1/63 NA NA rRNA export from nucleus YKR082W GO:0006365 0.0200467758102239 60/2993 4/63 0.0360957102659022 1 35S primary transcript processing YDL014W YGL120C YHR169W YNL112W GO:0030488 0.00367524223187437 11/2993 1/63 NA NA tRNA methylation YJL125C GO:0016573 0.00835282325425994 25/2993 1/63 NA NA histone acetylation YFL039C GO:0006608 0.00768459739391914 23/2993 1/63 NA NA snRNP protein import into nucleus YKR082W GO:0019478 0.000334112930170398 1/2993 1/63 NA NA D-amino acid catabolic process YDL219W GO:0006913 0.00233879051119278 7/2993 1/63 NA NA nucleocytoplasmic transport YAR002W GO:0001510 0.000334112930170398 1/2993 1/63 NA NA RNA methylation YDL014W GO:0000916 0.00100233879051119 3/2993 1/63 NA NA cytokinesis, contractile ring contraction YFL039C GO:0030490 0.0106916137654527 32/2993 4/63 0.00412117326066581 0.370905593459923 processing of 20S pre-rRNA YDL014W YDR324C YGL120C YJL109C GO:0006259 0.00267290344136318 8/2993 1/63 NA NA DNA metabolic process YKR082W GO:0030001 0.000334112930170398 1/2993 1/63 NA NA metal ion transport YLL018C GO:0000154 0.00367524223187437 11/2993 1/63 NA NA rRNA modification YDL014W GO:0016579 0.00534580688272636 16/2993 1/63 NA NA protein deubiquitination YER098W GO:0000743 0.00100233879051119 3/2993 1/63 NA NA nuclear migration during conjugation with cellular fusion YML085C GO:0042493 0.021049114600735 63/2993 1/63 NA NA response to drug YIL018W GO:0015908 0.00100233879051119 3/2993 1/63 NA NA fatty acid transport YKL188C GO:0045143 0.00100233879051119 3/2993 1/63 NA NA homologous chromosome segregation YML085C GO:0006468 0.0304042766455062 91/2993 1/63 NA NA protein amino acid phosphorylation YMR001C GO:0007119 0.00300701637153358 9/2993 1/63 NA NA budding cell isotropic bud growth YFL039C GO:0000910 0.0113598396257935 34/2993 1/63 NA NA cytokinesis YFL039C GO:0007047 0.021049114600735 63/2993 1/63 NA NA cell wall organization and biogenesis YFL039C GO:0000196 0.00133645172068159 4/2993 1/63 NA NA MAPKKK cascade during cell wall biogenesis YDR466W GO:0006003 0.000668225860340795 2/2993 1/63 NA NA fructose 2,6-bisphosphate metabolic process YIL107C GO:0031126 0.00167056465085199 5/2993 1/63 NA NA snoRNA 3'-end processing YDL014W GO:0006400 0.00634814567323755 19/2993 1/63 NA NA tRNA modification YPL086C GO:0000002 0.00701637153357835 21/2993 1/63 NA NA mitochondrial genome maintenance YFL036W GO:0000059 0.00133645172068159 4/2993 1/63 NA NA protein import into nucleus, docking YAR002W GO:0006406 0.0136986301369863 41/2993 1/63 NA NA mRNA export from nucleus YKR082W GO:0006950 0.0180420982292015 54/2993 1/63 NA NA response to stress YPR026W GO:0006414 0.00534580688272636 16/2993 1/63 NA NA translational elongation YLR340W GO:0000070 0.0100233879051119 30/2993 1/63 NA NA mitotic sister chromatid segregation YML085C GO:0000028 0.00367524223187437 11/2993 1/63 NA NA ribosomal small subunit assembly and maintenance YLR048W GO:0006357 0.0203808887403943 61/2993 2/63 0.369534482372981 1 regulation of transcription from RNA polymerase II promoter YFL039C YPL086C GO:0006631 0.00400935516204477 12/2993 1/63 NA NA fatty acid metabolic process YKL020C GO:0006897 0.0183762111593719 55/2993 1/63 NA NA endocytosis YFL039C GO:0000011 0.00467758102238557 14/2993 1/63 NA NA vacuole inheritance YFL039C GO:0006281 0.0160374206481791 48/2993 1/63 NA NA DNA repair YFL039C GO:0009409 0.00167056465085199 5/2993 1/63 NA NA response to cold YKL020C GO:0006409 0.00902104911460073 27/2993 2/63 0.109414274401435 1 tRNA export from nucleus YGL105W YKR082W GO:0006890 0.00534580688272636 16/2993 1/63 NA NA retrograde vesicle-mediated transport, Golgi to ER YPL010W GO:0009060 0.0123621784163047 37/2993 1/63 NA NA aerobic respiration YEL024W GO:0006366 0.0140327430671567 42/2993 1/63 NA NA transcription from RNA polymerase II promoter YIL021W GO:0006446 0.00300701637153358 9/2993 1/63 NA NA regulation of translational initiation YJL138C GO:0006892 0.00100233879051119 3/2993 1/63 NA NA post-Golgi vesicle-mediated transport YLR372W GO:0006383 0.00701637153357835 21/2993 1/63 NA NA transcription from RNA polymerase III promoter YPR110C GO:0006887 0.00601403274306716 18/2993 1/63 NA NA exocytosis YFL039C GO:0000723 0.0547945205479452 164/2993 3/63 0.680784164211991 1 telomere maintenance YAR002W YLR372W YMR143W Total number of genes: 2993 Total number of Study genes: 63 Total number of Study gene GMRG terms (pop non-singletons): 96 (90) Genes with GMRG information: 62 Genes with no GMRG information: 1 These are: YJR094W-A Bicluster # 8 GeneMerge v1.2; C:\AGO\AGB_FV_Sin_Traslape\GOAGB_FV_Sin_Traslapecluster8.txt Gene Association File: S_cerevisiae.BP Description File: GO.BP.use Population File: pop.txt Study File: C:\AGO\AGB_FV_Sin_Traslape\AGB_FV_Sin_Traslapecluster8.txt GMRG_Term Pop_freq Pop_frac Study_frac Raw_es e-score Description Contributing_genes GO:0000747 0.00467758102238557 14/2993 1/46 NA NA conjugation with cellular fusion YGL099W GO:0030437 0.0113598396257935 34/2993 1/46 NA NA sporulation (sensu Fungi) YGL099W GO:0006607 0.00768459739391914 23/2993 1/46 NA NA NLS-bearing substrate import into nucleus YGR119C GO:0030037 0.00133645172068159 4/2993 1/46 NA NA actin filament reorganization during cell cycle YDL226C GO:0006408 0.00768459739391914 23/2993 1/46 NA NA snRNA export from nucleus YGR119C GO:0008654 0.00434346809221517 13/2993 1/46 NA NA phospholipid biosynthetic process YBL039C GO:0006423 0.000334112930170398 1/2993 1/46 NA NA cysteinyl-tRNA aminoacylation YNL247W GO:0006609 0.00768459739391914 23/2993 1/46 NA NA mRNA-binding (hnRNP) protein import into nucleus YGR119C GO:0006457 0.00868693618443034 26/2993 1/46 NA NA protein folding YJR064W GO:0006432 0.000668225860340795 2/2993 1/46 NA NA phenylalanyl-tRNA aminoacylation YFL022C GO:0030148 0.00501169395255596 15/2993 2/46 0.0213690166859751 1 sphingolipid biosynthetic process YCR034W YDR062W GO:0006364 0.0106916137654527 32/2993 3/46 0.0123414993030249 0.826880453302669 rRNA processing YLR002C YMR302C YNL302C GO:0006348 0.0133645172068159 40/2993 1/46 NA NA chromatin silencing at telomere YDR440W GO:0006413 0.00935516204477113 28/2993 2/46 0.0678471208862677 1 translational initiation YJL138C YKR059W GO:0006817 0.00300701637153358 9/2993 1/46 NA NA phosphate transport YJL198W GO:0006555 0.00467758102238557 14/2993 1/46 NA NA methionine metabolic process YHR025W GO:0006534 0.000668225860340795 2/2993 1/46 NA NA cysteine metabolic process YNL247W GO:0030497 0.00100233879051119 3/2993 1/46 NA NA fatty acid elongation YCR034W GO:0005978 0.00200467758102239 6/2993 1/46 NA NA glycogen biosynthetic process YEL011W GO:0006412 0.0811894420314066 243/2993 8/46 0.0293362117324194 1 translation YDL082W YGR118W YGR148C YHR203C YML063W YNL096C YNL209W YNL302C GO:0006606 0.00735048446374875 22/2993 1/46 NA NA protein import into nucleus YGR119C GO:0007096 0.00601403274306716 18/2993 1/46 NA NA regulation of exit from mitosis YFR028C GO:0006486 0.00634814567323755 19/2993 2/46 0.0334752146513083 1 protein amino acid glycosylation YEL042W YJL183W GO:0006430 0.000668225860340795 2/2993 1/46 NA NA lysyl-tRNA aminoacylation YDR037W GO:0007059 0.00902104911460073 27/2993 1/46 NA NA chromosome segregation YDR409W GO:0006999 0.00835282325425994 25/2993 1/46 NA NA nuclear pore organization and biogenesis YGR119C GO:0006891 0.00467758102238557 14/2993 1/46 NA NA intra-Golgi vesicle-mediated transport YLR268W GO:0042254 0.0370865352489141 111/2993 6/46 0.0063431752755058 0.424992743458889 ribosome biogenesis and assembly YBL024W YEL026W YGL099W YLR002C YMR128W YNL247W GO:0006610 0.00768459739391914 23/2993 1/46 NA NA ribosomal protein import into nucleus YGR119C GO:0006611 0.00935516204477113 28/2993 1/46 NA NA protein export from nucleus YGR119C GO:0009092 0.00100233879051119 3/2993 1/46 NA NA homoserine metabolic process YHR025W GO:0006810 0.0147009689274975 44/2993 1/46 NA NA transport YLR083C GO:0000054 0.00167056465085199 5/2993 1/46 NA NA ribosome export from nucleus YGL099W GO:0006407 0.00868693618443034 26/2993 1/46 NA NA rRNA export from nucleus YGR119C GO:0030488 0.00367524223187437 11/2993 1/46 NA NA tRNA methylation YBL024W GO:0008645 0.00534580688272636 16/2993 1/46 NA NA hexose transport YHR096C GO:0006566 0.00167056465085199 5/2993 1/46 NA NA threonine metabolic process YHR025W GO:0006608 0.00768459739391914 23/2993 1/46 NA NA snRNP protein import into nucleus YGR119C GO:0006906 0.00768459739391914 23/2993 1/46 NA NA vesicle fusion YLR268W GO:0007039 0.00233879051119278 7/2993 1/46 NA NA vacuolar protein catabolic process YMR174C GO:0009437 0.00100233879051119 3/2993 1/46 NA NA carnitine metabolic process YML042W GO:0030490 0.0106916137654527 32/2993 2/46 0.0856823709901175 1 processing of 20S pre-rRNA YEL026W YMR128W GO:0016571 0.00534580688272636 16/2993 1/46 NA NA histone methylation YDR440W GO:0016925 0.00167056465085199 5/2993 1/46 NA NA protein sumoylation YDR409W GO:0008612 0.000334112930170398 1/2993 1/46 NA NA hypusine biosynthetic process from peptidyl-lysine YHR068W GO:0009229 0.000334112930170398 1/2993 1/46 NA NA thiamin diphosphate biosynthetic process YOR143C GO:0007242 0.000668225860340795 2/2993 1/46 NA NA intracellular signaling cascade YNL255C GO:0000398 0.0173738723688607 52/2993 1/46 NA NA nuclear mRNA splicing, via spliceosome YEL026W GO:0000056 0.00133645172068159 4/2993 1/46 NA NA ribosomal small subunit export from nucleus YNL302C GO:0006241 0.000668225860340795 2/2993 1/46 NA NA CTP biosynthetic process YBL039C GO:0006270 0.00835282325425994 25/2993 1/46 NA NA DNA replication initiation YLR002C GO:0019856 0.000668225860340795 2/2993 1/46 NA NA pyrimidine base biosynthetic process YBL039C GO:0006865 0.00501169395255596 15/2993 1/46 NA NA amino acid transport YFL055W GO:0043001 0.00100233879051119 3/2993 1/46 NA NA Golgi to plasma membrane protein transport YDL226C GO:0007010 0.00467758102238557 14/2993 1/46 NA NA cytoskeleton organization and biogenesis YJR064W GO:0000002 0.00701637153357835 21/2993 1/46 NA NA mitochondrial genome maintenance YMR302C GO:0016575 0.00634814567323755 19/2993 1/46 NA NA histone deacetylation YMR053C GO:0006406 0.0136986301369863 41/2993 1/46 NA NA mRNA export from nucleus YGR119C GO:0042274 0.00233879051119278 7/2993 1/46 NA NA ribosomal small subunit biogenesis and assembly YNL302C GO:0006450 0.00334112930170398 10/2993 2/46 0.00961595945936536 0.644269283777479 regulation of translational fidelity YGR118W YNL209W GO:0016192 0.00968927497494153 29/2993 1/46 NA NA vesicle-mediated transport YCR034W GO:0051083 0.00167056465085199 5/2993 1/46 NA NA cotranslational protein folding YNL209W GO:0006470 0.00902104911460073 27/2993 1/46 NA NA protein amino acid dephosphorylation YFR028C GO:0045333 0.000334112930170398 1/2993 1/46 NA NA cellular respiration YJL045W GO:0006549 0.000334112930170398 1/2993 1/46 NA NA isoleucine metabolic process YHR025W GO:0006409 0.00902104911460073 27/2993 1/46 NA NA tRNA export from nucleus YGR119C GO:0040020 0.00367524223187437 11/2993 1/46 NA NA regulation of meiosis YDR440W GO:0006890 0.00534580688272636 16/2993 2/46 0.0241853726061964 1 retrograde vesicle-mediated transport, Golgi to ER YDL226C YLR268W GO:0006366 0.0140327430671567 42/2993 1/46 NA NA transcription from RNA polymerase II promoter YIL021W GO:0006446 0.00300701637153358 9/2993 1/46 NA NA regulation of translational initiation YJL138C GO:0006888 0.0106916137654527 32/2993 2/46 0.0856823709901175 1 ER to Golgi vesicle-mediated transport YDL226C YLR268W GO:0000723 0.0547945205479452 164/2993 3/46 0.466133563597953 1 telomere maintenance YGR118W YHR203C YKR059W Total number of genes: 2993 Total number of Study genes: 46 Total number of Study gene GMRG terms (pop non-singletons): 72 (67) Genes with GMRG information: 45 Genes with no GMRG information: 1 These are: YHR005C-A Bicluster # 9 GeneMerge v1.2; C:\AGO\AGB_FV_Sin_Traslape\GOAGB_FV_Sin_Traslapecluster9.txt Gene Association File: S_cerevisiae.BP Description File: GO.BP.use Population File: pop.txt Study File: C:\AGO\AGB_FV_Sin_Traslape\AGB_FV_Sin_Traslapecluster9.txt GMRG_Term Pop_freq Pop_frac Study_frac Raw_es e-score Description Contributing_genes GO:0030489 0.00233879051119278 7/2993 2/44 0.0042333744915925 0.15240148169733 processing of 27S pre-rRNA YCL054W YGL246C GO:0006360 0.00801871032408954 24/2993 2/44 0.0475118870667096 1 transcription from RNA polymerase I promoter YOR210W YPR110C GO:0009082 0.00233879051119278 7/2993 1/44 NA NA branched chain family amino acid biosynthetic process YHR208W GO:0000154 0.00367524223187437 11/2993 3/44 0.000450721031665478 0.0162259571399572 rRNA modification YER127W YNL075W YPL266W GO:0000055 0.00200467758102239 6/2993 1/44 NA NA ribosomal large subunit export from nucleus YLL034C GO:0006423 0.000334112930170398 1/2993 1/44 NA NA cysteinyl-tRNA aminoacylation YNL247W GO:0030846 0.00267290344136318 8/2993 1/44 NA NA transcription termination from Pol II promoter, RNA polymerase(A) coupled YGL246C GO:0000398 0.0173738723688607 52/2993 1/44 NA NA nuclear mRNA splicing, via spliceosome YEL026W GO:0000027 0.0100233879051119 30/2993 2/44 0.0708696949996902 1 ribosomal large subunit assembly and maintenance YGL078C YLL008W GO:0006696 0.00768459739391914 23/2993 1/44 NA NA ergosterol biosynthetic process YPL117C GO:0006364 0.0106916137654527 32/2993 1/44 NA NA rRNA processing YBR247C GO:0042144 0.00434346809221517 13/2993 1/44 NA NA vacuole fusion, non-autophagic YNL015W GO:0006413 0.00935516204477113 28/2993 5/44 4.16100630884201e-005 0.00149796227118312 translational initiation YBR079C YER025W YJL138C YJR007W YMR146C GO:0006534 0.000668225860340795 2/2993 1/44 NA NA cysteine metabolic process YNL247W GO:0006412 0.0811894420314066 243/2993 14/44 4.69865424902914e-006 0.000169151552965049 translation YBL027W YBR191W YCL037C YDL136W YDR025W YDR471W YDR500C YGL123W YGR214W YJL189W YLR185W YMR143W YOR293W YPL198W GO:0031118 0.00100233879051119 3/2993 1/44 NA NA rRNA pseudouridine synthesis YLR175W GO:0006606 0.00735048446374875 22/2993 1/44 NA NA protein import into nucleus YMR235C GO:0006431 0.00100233879051119 3/2993 1/44 NA NA methionyl-tRNA aminoacylation YGR264C GO:0006400 0.00634814567323755 19/2993 1/44 NA NA tRNA modification YKR056W GO:0016072 0.000668225860340795 2/2993 1/44 NA NA rRNA metabolic process YMR235C GO:0042274 0.00233879051119278 7/2993 1/44 NA NA ribosomal small subunit biogenesis and assembly YLR186W GO:0006450 0.00334112930170398 10/2993 2/44 0.00882053849359972 0.31753938576959 regulation of translational fidelity YDR025W YGL123W GO:0031167 0.000668225860340795 2/2993 1/44 NA NA rRNA methylation YCL054W GO:0000028 0.00367524223187437 11/2993 2/44 0.0106804979295852 0.384497925465069 ribosomal small subunit assembly and maintenance YDR025W YGR214W GO:0042254 0.0370865352489141 111/2993 15/44 1.25185103194884e-011 4.50666371501582e-010 ribosome biogenesis and assembly YBR247C YCL037C YEL026W YER127W YHR089C YKL099C YKR056W YKR092C YLL008W YLR175W YLR186W YNL075W YNL247W YPL266W YPR110C GO:0030162 0.000668225860340795 2/2993 1/44 NA NA regulation of proteolysis YNL015W GO:0006404 0.000334112930170398 1/2993 1/44 NA NA RNA import into nucleus YMR235C GO:0009083 0.000668225860340795 2/2993 1/44 NA NA branched chain family amino acid catabolic process YHR208W GO:0006281 0.0160374206481791 48/2993 1/44 NA NA DNA repair YKR056W GO:0000054 0.00167056465085199 5/2993 1/44 NA NA ribosome export from nucleus YMR235C GO:0006407 0.00868693618443034 26/2993 1/44 NA NA rRNA export from nucleus YMR235C GO:0006365 0.0200467758102239 60/2993 9/44 1.15931807970917e-007 4.17354508695303e-006 35S primary transcript processing YBR247C YER127W YGL078C YHR089C YLL008W YLR175W YLR186W YNL075W YPL266W GO:0006366 0.0140327430671567 42/2993 1/44 NA NA transcription from RNA polymerase II promoter YOR210W GO:0006446 0.00300701637153358 9/2993 1/44 NA NA regulation of translational initiation YJL138C GO:0006913 0.00233879051119278 7/2993 1/44 NA NA nucleocytoplasmic transport YKR092C GO:0030490 0.0106916137654527 32/2993 3/44 0.010924236971236 0.393272530964496 processing of 20S pre-rRNA YEL026W YKL099C YNL075W GO:0006383 0.00701637153357835 21/2993 3/44 0.00327814920868651 0.118013371512714 transcription from RNA polymerase III promoter YKL144C YOR210W YPR110C GO:0000723 0.0547945205479452 164/2993 1/44 NA NA telomere maintenance YMR143W Total number of genes: 2993 Total number of Study genes: 44 Total number of Study gene GMRG terms (pop non-singletons): 38 (36) Genes with GMRG information: 44 Genes with no GMRG information: These are: Bicluster # 10 GeneMerge v1.2; C:\AGO\AGB_FV_Sin_Traslape\GOAGB_FV_Sin_Traslapecluster10.txt Gene Association File: S_cerevisiae.BP Description File: GO.BP.use Population File: pop.txt Study File: C:\AGO\AGB_FV_Sin_Traslape\AGB_FV_Sin_Traslapecluster10.txt GMRG_Term Pop_freq Pop_frac Study_frac Raw_es e-score Description Contributing_genes GO:0030489 0.00233879051119278 7/2993 4/54 3.18571520148161e-006 0.000181585766484452 processing of 27S pre-rRNA YCL054W YGL120C YKR081C YNL002C GO:0000747 0.00467758102238557 14/2993 1/54 NA NA conjugation with cellular fusion YDR312W GO:0030437 0.0113598396257935 34/2993 1/54 NA NA sporulation (sensu Fungi) YIR026C GO:0006308 0.000334112930170398 1/2993 1/54 NA NA DNA catabolic process YJL208C GO:0006360 0.00801871032408954 24/2993 2/54 0.0684847730712886 1 transcription from RNA polymerase I promoter YJL148W YNL113W GO:0000162 0.00334112930170398 10/2993 1/54 NA NA tryptophan biosynthetic process YHL011C GO:0009082 0.00233879051119278 7/2993 1/54 NA NA branched chain family amino acid biosynthetic process YHR208W GO:0008654 0.00434346809221517 13/2993 2/54 0.0219456115705992 1 phospholipid biosynthetic process YBL039C YKR067W GO:0000154 0.00367524223187437 11/2993 3/54 0.00082724567084008 0.0471530032378846 rRNA modification YER127W YPL266W YPR137W GO:0000055 0.00200467758102239 6/2993 1/54 NA NA ribosomal large subunit export from nucleus YHR170W GO:0006623 0.00668225860340795 20/2993 1/54 NA NA protein targeting to vacuole YOL082W GO:0000105 0.00467758102238557 14/2993 1/54 NA NA histidine biosynthetic process YHL011C GO:0042273 0.00200467758102239 6/2993 2/54 0.00457591344815772 0.26082706654499 ribosomal large subunit biogenesis and assembly YGL120C YNL002C GO:0043630 0.00100233879051119 3/2993 1/54 NA NA ncRNA polyadenylation during polyadenylation-dependent ncRNA catabolic process YNL299W GO:0016076 0.000668225860340795 2/2993 1/54 NA NA snRNA catabolic process YNL299W GO:0006006 0.00467758102238557 14/2993 2/54 0.0253105161679709 1 glucose metabolic process YHR043C YJL155C GO:0005992 0.00133645172068159 4/2993 1/54 NA NA trehalose biosynthetic process YML100W GO:0006241 0.000668225860340795 2/2993 1/54 NA NA CTP biosynthetic process YBL039C GO:0016075 0.00100233879051119 3/2993 1/54 NA NA rRNA catabolic process YNL299W GO:0008361 0.00634814567323755 19/2993 1/54 NA NA regulation of cell size YHL011C GO:0006270 0.00835282325425994 25/2993 1/54 NA NA DNA replication initiation YLR002C GO:0030433 0.00567991981289676 17/2993 1/54 NA NA ER-associated protein catabolic process YHR043C GO:0000027 0.0100233879051119 30/2993 6/54 1.10666058704634e-005 0.000630796534616412 ribosomal large subunit assembly and maintenance YDR312W YGL078C YHR170W YKR024C YKR081C YLR276C GO:0006364 0.0106916137654527 32/2993 5/54 0.000220317526006166 0.0125580989823515 rRNA processing YDR083W YDR365C YGL120C YLR002C YPL043W GO:0019856 0.000668225860340795 2/2993 1/54 NA NA pyrimidine base biosynthetic process YBL039C GO:0006413 0.00935516204477113 28/2993 2/54 0.0896465596257387 1 translational initiation YGR162W YNL062C GO:0006850 0.000334112930170398 1/2993 1/54 NA NA mitochondrial pyruvate transport YIL006W GO:0045944 0.0160374206481791 48/2993 1/54 NA NA positive regulation of transcription from RNA polymerase II promoter YIR018W GO:0006400 0.00634814567323755 19/2993 1/54 NA NA tRNA modification YKR056W GO:0006207 0.00167056465085199 5/2993 1/54 NA NA 'de novo' pyrimidine base biosynthetic process YHL011C GO:0006310 0.00467758102238557 14/2993 1/54 NA NA DNA recombination YJL208C GO:0008150 0.0180420982292015 54/2993 1/54 NA NA biological_process YML100W GO:0009072 0.000668225860340795 2/2993 1/54 NA NA aromatic amino acid family metabolic process YHR137W GO:0006950 0.0180420982292015 54/2993 2/54 0.254522265503248 1 response to stress YHR043C YML100W GO:0006166 0.00167056465085199 5/2993 1/54 NA NA purine ribonucleoside salvage YHL011C GO:0031167 0.000668225860340795 2/2993 1/54 NA NA rRNA methylation YCL054W GO:0000391 0.00100233879051119 3/2993 1/54 NA NA U2-dependent spliceosome disassembly YGL120C GO:0042254 0.0370865352489141 111/2993 35/54 2.80810984971251e-039 1.60062261433613e-037 ribosome biogenesis and assembly YDL201W YDR083W YDR165W YDR312W YDR324C YDR365C YDR398W YER127W YGL120C YGR128C YGR162W YHL011C YHR065C YHR169W YHR170W YHR196W YIR026C YJL033W YJL125C YJL148W YJL208C YKL099C YKR024C YKR056W YKR060W YKR081C YKR092C YLR002C YLR276C YMR128W YNL002C YNL062C YNL113W YPL043W YPL266W GO:0043629 0.000668225860340795 2/2993 1/54 NA NA ncRNA polyadenylation YNL299W GO:0005977 0.00400935516204477 12/2993 1/54 NA NA glycogen metabolic process YIR026C GO:0016077 0.000668225860340795 2/2993 1/54 NA NA snoRNA catabolic process YNL299W GO:0000083 0.00300701637153358 9/2993 1/54 NA NA G1/S-specific transcription in mitotic cell cycle YIR018W GO:0006883 0.000668225860340795 2/2993 1/54 NA NA sodium ion homeostasis YDR436W GO:0007064 0.00434346809221517 13/2993 1/54 NA NA mitotic sister chromatid cohesion YNL299W GO:0006401 0.00133645172068159 4/2993 1/54 NA NA RNA catabolic process YJL208C GO:0000719 0.000334112930170398 1/2993 1/54 NA NA photoreactive repair YOR386W GO:0006810 0.0147009689274975 44/2993 1/54 NA NA transport YIL006W GO:0009083 0.000668225860340795 2/2993 1/54 NA NA branched chain family amino acid catabolic process YHR208W GO:0006281 0.0160374206481791 48/2993 1/54 NA NA DNA repair YKR056W GO:0006415 0.00100233879051119 3/2993 1/54 NA NA translational termination YDR172W GO:0042779 0.000334112930170398 1/2993 1/54 NA NA removal of tRNA 3'-trailer sequence YKR079C GO:0006365 0.0200467758102239 60/2993 11/54 4.01123112190877e-009 2.286401739488e-007 35S primary transcript processing YER127W YGL078C YGL120C YHR065C YHR169W YJL033W YKR024C YKR060W YLR276C YPL266W YPR137W GO:0000288 0.00367524223187437 11/2993 1/54 NA NA mRNA catabolic process, deadenylation-dependent decay YDR172W GO:0030488 0.00367524223187437 11/2993 4/54 2.84629027055671e-005 0.00162238545421733 tRNA methylation YDL201W YDR165W YJL125C YNL062C GO:0006189 0.00200467758102239 6/2993 1/54 NA NA 'de novo' IMP biosynthetic process YHL011C GO:0043132 0.000668225860340795 2/2993 1/54 NA NA NAD transport YIL006W GO:0007126 0.0113598396257935 34/2993 1/54 NA NA meiosis YIR026C GO:0006913 0.00233879051119278 7/2993 1/54 NA NA nucleocytoplasmic transport YKR092C GO:0030490 0.0106916137654527 32/2993 8/54 4.9652027893407e-008 2.8301655899242e-006 processing of 20S pre-rRNA YDR324C YDR398W YGL120C YGR128C YHR196W YKL099C YMR128W YPR137W GO:0006383 0.00701637153357835 21/2993 2/54 0.0539147008222785 1 transcription from RNA polymerase III promoter YDL150W YNL113W GO:0000723 0.0547945205479452 164/2993 2/54 0.805703739429549 1 telomere maintenance YDR083W YHL011C Total number of genes: 2993 Total number of Study genes: 54 Total number of Study gene GMRG terms (pop non-singletons): 61 (57) Genes with GMRG information: 54 Genes with no GMRG information: These are: Bicluster # 11 GeneMerge v1.2; C:\AGO\AGB_FV_Sin_Traslape\GOAGB_FV_Sin_Traslapecluster11.txt Gene Association File: S_cerevisiae.BP Description File: GO.BP.use Population File: pop.txt Study File: C:\AGO\AGB_FV_Sin_Traslape\AGB_FV_Sin_Traslapecluster11.txt GMRG_Term Pop_freq Pop_frac Study_frac Raw_es e-score Description Contributing_genes GO:0030489 0.00233879051119278 7/2993 1/44 NA NA processing of 27S pre-rRNA YCL054W GO:0000747 0.00467758102238557 14/2993 1/44 NA NA conjugation with cellular fusion YDR312W GO:0006360 0.00801871032408954 24/2993 2/44 0.0475118870667096 1 transcription from RNA polymerase I promoter YNL113W YNL248C GO:0006296 0.000668225860340795 2/2993 1/44 NA NA nucleotide-excision repair, DNA incision, 5'-to lesion YPL022W GO:0009082 0.00233879051119278 7/2993 1/44 NA NA branched chain family amino acid biosynthetic process YJR148W GO:0001403 0.0100233879051119 30/2993 1/44 NA NA invasive growth (sensu Saccharomyces) YGL208W GO:0042273 0.00200467758102239 6/2993 1/44 NA NA ribosomal large subunit biogenesis and assembly YHR052W GO:0007165 0.00935516204477113 28/2993 1/44 NA NA signal transduction YGL208W GO:0016075 0.00100233879051119 3/2993 1/44 NA NA rRNA catabolic process YJL050W GO:0000027 0.0100233879051119 30/2993 3/44 0.00912642863789909 0.666229290566634 ribosomal large subunit assembly and maintenance YDR312W YLR276C YNR038W GO:0006364 0.0106916137654527 32/2993 3/44 0.010924236971236 0.797469298900228 rRNA processing YER006W YJL010C YLR002C GO:0006348 0.0133645172068159 40/2993 1/44 NA NA chromatin silencing at telomere YGL037C GO:0000290 0.00233879051119278 7/2993 1/44 NA NA deadenylation-dependent decapping YER035W GO:0007005 0.00367524223187437 11/2993 1/44 NA NA mitochondrion organization and biogenesis YNL055C GO:0000735 0.00133645172068159 4/2993 1/44 NA NA removal of nonhomologous ends YPL022W GO:0006413 0.00935516204477113 28/2993 1/44 NA NA translational initiation YNL062C GO:0006817 0.00300701637153358 9/2993 1/44 NA NA phosphate transport YER053C GO:0006098 0.00200467758102239 6/2993 1/44 NA NA pentose-phosphate shunt YOR095C GO:0005978 0.00200467758102239 6/2993 1/44 NA NA glycogen biosynthetic process YEL011W GO:0001302 0.00701637153357835 21/2993 2/44 0.0371645821226279 1 replicative cell aging YGL037C YGL208W GO:0045944 0.0160374206481791 48/2993 1/44 NA NA positive regulation of transcription from RNA polymerase II promoter YIR033W GO:0006412 0.0811894420314066 243/2993 1/44 NA NA translation YJR145C GO:0008150 0.0180420982292015 54/2993 1/44 NA NA biological_process YER053C GO:0006110 0.000668225860340795 2/2993 1/44 NA NA regulation of glycolysis YIL107C GO:0000122 0.0113598396257935 34/2993 1/44 NA NA negative regulation of transcription from RNA polymerase II promoter YGR044C GO:0031167 0.000668225860340795 2/2993 1/44 NA NA rRNA methylation YCL054W GO:0042254 0.0370865352489141 111/2993 18/44 2.03000429125669e-015 1.48190313261738e-013 ribosome biogenesis and assembly YDL148C YDL201W YDR312W YDR398W YER006W YHR052W YHR196W YJL010C YJL050W YLR002C YLR276C YNL062C YNL113W YNL248C YNR038W YOR001W YOR095C YOR243C GO:0043634 0.00133645172068159 4/2993 2/44 0.00124405154965149 0.0908157631245588 polyadenylation-dependent ncRNA catabolic process YJL050W YOR001W GO:0005975 0.00367524223187437 11/2993 1/44 NA NA carbohydrate metabolic process YIL154C GO:0006810 0.0147009689274975 44/2993 3/44 0.0258182453453136 1 transport YDR406W YLR083C YNL275W GO:0040031 0.000334112930170398 1/2993 1/44 NA NA snRNA modification YOR243C GO:0007569 0.000668225860340795 2/2993 1/44 NA NA cell aging YGL208W GO:0006365 0.0200467758102239 60/2993 5/44 0.00163058862170031 0.119032969384122 35S primary transcript processing YDL148C YJL050W YLR276C YNR038W YOR001W GO:0030488 0.00367524223187437 11/2993 2/44 0.0106804979295852 0.779676348859723 tRNA methylation YDL201W YNL062C GO:0030163 0.00233879051119278 7/2993 1/44 NA NA protein catabolic process YHR052W GO:0006402 0.00968927497494153 29/2993 1/44 NA NA mRNA catabolic process YOR001W GO:0006312 0.00167056465085199 5/2993 1/44 NA NA mitotic recombination YPL022W GO:0030490 0.0106916137654527 32/2993 4/44 0.001083079929544 0.0790648348567119 processing of 20S pre-rRNA YDL148C YDR398W YHR196W YJR145C GO:0006879 0.00668225860340795 20/2993 1/44 NA NA iron ion homeostasis YEL065W GO:0006259 0.00267290344136318 8/2993 1/44 NA NA DNA metabolic process YIL036W GO:0030003 0.00200467758102239 6/2993 1/44 NA NA cation homeostasis YOR129C GO:0006280 0.00300701637153358 9/2993 1/44 NA NA mutagenesis YIL139C GO:0000710 0.00233879051119278 7/2993 1/44 NA NA meiotic mismatch repair YPL022W GO:0016579 0.00534580688272636 16/2993 1/44 NA NA protein deubiquitination YER098W GO:0043630 0.00100233879051119 3/2993 1/44 NA NA ncRNA polyadenylation during polyadenylation-dependent ncRNA catabolic process YJL050W GO:0042493 0.021049114600735 63/2993 1/44 NA NA response to drug YOR129C GO:0008361 0.00634814567323755 19/2993 1/44 NA NA regulation of cell size YNL248C GO:0046713 0.000334112930170398 1/2993 1/44 NA NA boron transport YNL275W GO:0006468 0.0304042766455062 91/2993 1/44 NA NA protein amino acid phosphorylation YGL208W GO:0006270 0.00835282325425994 25/2993 1/44 NA NA DNA replication initiation YLR002C GO:0016078 0.000668225860340795 2/2993 1/44 NA NA tRNA catabolic process YJL050W GO:0006003 0.000668225860340795 2/2993 1/44 NA NA fructose 2,6-bisphosphate metabolic process YIL107C GO:0046855 0.000668225860340795 2/2993 1/44 NA NA inositol phosphate dephosphorylation YDR287W GO:0000082 0.0103575008352823 31/2993 1/44 NA NA G1/S transition of mitotic cell cycle YJL098W GO:0006400 0.00634814567323755 19/2993 1/44 NA NA tRNA modification YOR243C GO:0006367 0.0147009689274975 44/2993 1/44 NA NA transcription initiation from RNA polymerase II promoter YIL036W GO:0006406 0.0136986301369863 41/2993 1/44 NA NA mRNA export from nucleus YJL050W GO:0019358 0.000668225860340795 2/2993 1/44 NA NA nicotinate nucleotide salvage YGL037C GO:0008615 0.000334112930170398 1/2993 1/44 NA NA pyridoxine biosynthetic process YOR095C GO:0015892 0.00167056465085199 5/2993 1/44 NA NA siderophore-iron transport YEL065W GO:0030969 0.000668225860340795 2/2993 1/44 NA NA UFP-specific transcription factor mRNA processing during unfolded protein response YJL087C GO:0042274 0.00233879051119278 7/2993 1/44 NA NA ribosomal small subunit biogenesis and assembly YDL148C GO:0001522 0.00100233879051119 3/2993 1/44 NA NA pseudouridine synthesis YOR243C GO:0042149 0.00133645172068159 4/2993 1/44 NA NA cellular response to glucose starvation YGL208W GO:0006631 0.00400935516204477 12/2993 1/44 NA NA fatty acid metabolic process YIR033W GO:0000183 0.00367524223187437 11/2993 1/44 NA NA chromatin silencing at rDNA YGL037C GO:0009083 0.000668225860340795 2/2993 1/44 NA NA branched chain family amino acid catabolic process YJR148W GO:0006281 0.0160374206481791 48/2993 2/44 0.156111357065335 1 DNA repair YIL139C YIL154C GO:0006388 0.00400935516204477 12/2993 1/44 NA NA tRNA splicing YJL087C GO:0009409 0.00167056465085199 5/2993 1/44 NA NA response to cold YIR033W GO:0000736 0.000668225860340795 2/2993 1/44 NA NA double-strand break repair via single-strand annealing, removal of nonhomologous ends YPL022W GO:0006811 0.000668225860340795 2/2993 1/44 NA NA ion transport YNL055C GO:0009060 0.0123621784163047 37/2993 1/44 NA NA aerobic respiration YNL055C GO:0007126 0.0113598396257935 34/2993 1/44 NA NA meiosis YGR044C GO:0006751 0.000334112930170398 1/2993 1/44 NA NA glutathione catabolic process YLR299W GO:0006383 0.00701637153357835 21/2993 1/44 NA NA transcription from RNA polymerase III promoter YNL113W GO:0000723 0.0547945205479452 164/2993 2/44 0.704728118113831 1 telomere maintenance YIL036W YJR145C Total number of genes: 2993 Total number of Study genes: 44 Total number of Study gene GMRG terms (pop non-singletons): 77 (73) Genes with GMRG information: 44 Genes with no GMRG information: These are: Bicluster # 12 GeneMerge v1.2; C:\AGO\AGB_FV_Sin_Traslape\GOAGB_FV_Sin_Traslapecluster12.txt Gene Association File: S_cerevisiae.BP Description File: GO.BP.use Population File: pop.txt Study File: C:\AGO\AGB_FV_Sin_Traslape\AGB_FV_Sin_Traslapecluster12.txt GMRG_Term Pop_freq Pop_frac Study_frac Raw_es e-score Description Contributing_genes GO:0046470 0.000334112930170398 1/2993 1/67 NA NA phosphatidylcholine metabolic process YMR079W GO:0000747 0.00467758102238557 14/2993 2/67 0.0377759137048584 1 conjugation with cellular fusion YCR002C YGL099W GO:0030437 0.0113598396257935 34/2993 2/67 0.175773629694937 1 sporulation (sensu Fungi) YGL099W YMR079W GO:0006360 0.00801871032408954 24/2993 2/67 0.0994115182065295 1 transcription from RNA polymerase I promoter YJL025W YPR187W GO:0007067 0.00200467758102239 6/2993 1/67 NA NA mitosis YDR159W GO:0000096 0.00200467758102239 6/2993 1/67 NA NA sulfur amino acid metabolic process YPL273W GO:0006122 0.00233879051119278 7/2993 1/67 NA NA mitochondrial electron transport, ubiquinol to cytochrome c YJL166W GO:0006432 0.000668225860340795 2/2993 1/67 NA NA phenylalanyl-tRNA aminoacylation YFL022C GO:0030433 0.00567991981289676 17/2993 1/67 NA NA ER-associated protein catabolic process YIL030C GO:0000027 0.0100233879051119 30/2993 2/67 0.144065164522166 1 ribosomal large subunit assembly and maintenance YLR276C YLR340W GO:0015718 0.000334112930170398 1/2993 1/67 NA NA monocarboxylic acid transport YNL065W GO:0006364 0.0106916137654527 32/2993 3/67 0.0334812676872931 1 rRNA processing YDR365C YHR062C YMR229C GO:0006893 0.00467758102238557 14/2993 2/67 0.0377759137048584 1 Golgi to plasma membrane transport YMR079W YMR183C GO:0000084 0.00133645172068159 4/2993 1/67 NA NA S phase of mitotic cell cycle YLR210W GO:0006413 0.00935516204477113 28/2993 1/67 NA NA translational initiation YPR163C GO:0046488 0.000334112930170398 1/2993 1/67 NA NA phosphatidylinositol metabolic process YMR079W GO:0006412 0.0811894420314066 243/2993 21/67 2.36584535691555e-008 1.63243329627173e-006 translation YCR031C YDR447C YDR471W YGL076C YGL135W YGR214W YIL018W YIL052C YIL078W YJL177W YJL190C YKL180W YKR094C YLR192C YLR340W YMR121C YMR242C YNL162W YNL209W YNL301C YPL079W GO:0006487 0.0100233879051119 30/2993 4/67 0.0040559362128897 0.279859598689389 protein amino acid N-linked glycosylation YGL022W YGL027C YOR067C YPL050C GO:0008150 0.0180420982292015 54/2993 1/67 NA NA biological_process YNL162W GO:0006561 0.00100233879051119 3/2993 1/67 NA NA proline biosynthetic process YOR323C GO:0009072 0.000668225860340795 2/2993 1/67 NA NA aromatic amino acid family metabolic process YGL202W GO:0030468 0.0140327430671567 42/2993 1/67 NA NA establishment of cell polarity (sensu Fungi) YCR002C GO:0006488 0.00200467758102239 6/2993 1/67 NA NA dolichol-linked oligosaccharide biosynthetic process YOR067C GO:0042254 0.0370865352489141 111/2993 7/67 0.0110465266386849 0.76221033806926 ribosome biogenesis and assembly YDR365C YER127W YGL099W YKR094C YLR129W YLR276C YMR229C GO:0006611 0.00935516204477113 28/2993 1/67 NA NA protein export from nucleus YDR159W GO:0042256 0.000334112930170398 1/2993 1/67 NA NA mature ribosome assembly YPR041W GO:0009272 0.00100233879051119 3/2993 1/67 NA NA cell wall biosynthetic process (sensu Fungi) YBR229C GO:0007121 0.00902104911460073 27/2993 1/67 NA NA bipolar bud site selection YCR002C GO:0000902 0.00367524223187437 11/2993 1/67 NA NA cell morphogenesis YCR002C GO:0000054 0.00167056465085199 5/2993 1/67 NA NA ribosome export from nucleus YGL099W GO:0006365 0.0200467758102239 60/2993 4/67 0.0437957958654178 1 35S primary transcript processing YDL111C YER127W YLR276C YMR229C GO:0006402 0.00968927497494153 29/2993 1/67 NA NA mRNA catabolic process YDL111C GO:0008033 0.00434346809221517 13/2993 1/67 NA NA tRNA processing YHR062C GO:0006906 0.00768459739391914 23/2993 1/67 NA NA vesicle fusion YMR183C GO:0006913 0.00233879051119278 7/2993 1/67 NA NA nucleocytoplasmic transport YNL189W GO:0000086 0.00735048446374875 22/2993 1/67 NA NA G2/M transition of mitotic cell cycle YLR210W GO:0030490 0.0106916137654527 32/2993 4/67 0.00514636602699674 0.355099255862775 processing of 20S pre-rRNA YCR031C YLR129W YLR192C YMR229C GO:0000079 0.00467758102238557 14/2993 1/67 NA NA regulation of cyclin-dependent protein kinase activity YLR210W GO:0006338 0.0106916137654527 32/2993 1/67 NA NA chromatin remodeling YLR321C GO:0007035 0.00534580688272636 16/2993 2/67 0.0484104363937433 1 vacuolar acidification YGR020C YOR270C GO:0006302 0.00300701637153358 9/2993 1/67 NA NA double-strand break repair YLR321C GO:0000154 0.00367524223187437 11/2993 1/67 NA NA rRNA modification YER127W GO:0000105 0.00467758102238557 14/2993 1/67 NA NA histidine biosynthetic process YER055C GO:0007242 0.000668225860340795 2/2993 1/67 NA NA intracellular signaling cascade YNL255C GO:0042493 0.021049114600735 63/2993 1/67 NA NA response to drug YIL018W GO:0006468 0.0304042766455062 91/2993 1/67 NA NA protein amino acid phosphorylation YER123W GO:0000910 0.0113598396257935 34/2993 1/67 NA NA cytokinesis YCR002C GO:0006696 0.00768459739391914 23/2993 1/67 NA NA ergosterol biosynthetic process YMR202W GO:0007047 0.021049114600735 63/2993 3/67 0.165745726926841 1 cell wall organization and biogenesis YCR002C YGL027C YLR433C GO:0015719 0.000334112930170398 1/2993 1/67 NA NA allantoate transport YJR152W GO:0006461 0.00601403274306716 18/2993 1/67 NA NA protein complex assembly YOR270C GO:0006406 0.0136986301369863 41/2993 1/67 NA NA mRNA export from nucleus YDR159W GO:0006627 0.00167056465085199 5/2993 1/67 NA NA mitochondrial protein processing YHR024C GO:0016567 0.00968927497494153 29/2993 1/67 NA NA protein ubiquitination YKR094C GO:0006414 0.00534580688272636 16/2993 1/67 NA NA translational elongation YLR340W GO:0006450 0.00334112930170398 10/2993 1/67 NA NA regulation of translational fidelity YNL209W GO:0051083 0.00167056465085199 5/2993 1/67 NA NA cotranslational protein folding YNL209W GO:0000028 0.00367524223187437 11/2993 3/67 0.00155621006377499 0.107378494400474 ribosomal small subunit assembly and maintenance YCR031C YDR447C YGR214W GO:0000754 0.00200467758102239 6/2993 1/67 NA NA adaptation to pheromone during conjugation with cellular fusion YLR433C GO:0006797 0.000334112930170398 1/2993 1/67 NA NA polyphosphate metabolic process YOR270C GO:0015914 0.00167056465085199 5/2993 1/67 NA NA phospholipid transport YMR079W GO:0030476 0.00567991981289676 17/2993 2/67 0.054088486885984 1 spore wall assembly (sensu Fungi) YCR002C YDR096W GO:0006490 0.00100233879051119 3/2993 1/67 NA NA oligosaccharide-lipid intermediate assembly YOR067C GO:0006388 0.00400935516204477 12/2993 1/67 NA NA tRNA splicing YOL102C GO:0006916 0.000334112930170398 1/2993 1/67 NA NA anti-apoptosis YLR150W GO:0006873 0.00367524223187437 11/2993 1/67 NA NA cell ion homeostasis YLR433C GO:0009060 0.0123621784163047 37/2993 1/67 NA NA aerobic respiration YJL166W GO:0006366 0.0140327430671567 42/2993 3/67 0.0662419798679288 1 transcription from RNA polymerase II promoter YMR005W YOR151C YPR187W GO:0007120 0.00534580688272636 16/2993 1/67 NA NA axial bud site selection YCR002C GO:0030029 0.00100233879051119 3/2993 1/67 NA NA actin filament-based process YDR159W GO:0015893 0.00133645172068159 4/2993 1/67 NA NA drug transport YNL065W GO:0006446 0.00300701637153358 9/2993 2/67 0.0160583627665489 1 regulation of translational initiation YOR260W YPR041W GO:0000753 0.00200467758102239 6/2993 1/67 NA NA cellular morphogenesis during conjugation with cellular fusion YCR002C GO:0006644 0.00267290344136318 8/2993 1/67 NA NA phospholipid metabolic process YDR096W GO:0006383 0.00701637153357835 21/2993 1/67 NA NA transcription from RNA polymerase III promoter YPR187W GO:0000723 0.0547945205479452 164/2993 8/67 0.0281699380796266 1 telomere maintenance YCR031C YDR447C YGL135W YIL052C YJL190C YLR150W YLR192C YMR202W Total number of genes: 2993 Total number of Study genes: 67 Total number of Study gene GMRG terms (pop non-singletons): 76 (69) Genes with GMRG information: 67 Genes with no GMRG information: These are: Bicluster # 13 GeneMerge v1.2; C:\AGO\AGB_FV_Sin_Traslape\GOAGB_FV_Sin_Traslapecluster13.txt Gene Association File: S_cerevisiae.BP Description File: GO.BP.use Population File: pop.txt Study File: C:\AGO\AGB_FV_Sin_Traslape\AGB_FV_Sin_Traslapecluster13.txt GMRG_Term Pop_freq Pop_frac Study_frac Raw_es e-score Description Contributing_genes GO:0007124 0.0167056465085199 50/2993 1/71 NA NA pseudohyphal growth YER118C GO:0046470 0.000334112930170398 1/2993 1/71 NA NA phosphatidylcholine metabolic process YMR079W GO:0030437 0.0113598396257935 34/2993 1/71 NA NA sporulation (sensu Fungi) YMR079W GO:0006421 0.000334112930170398 1/2993 1/71 NA NA asparaginyl-tRNA aminoacylation YHR019C GO:0017148 0.000668225860340795 2/2993 1/71 NA NA negative regulation of protein biosynthetic process YOR276W GO:0006457 0.00868693618443034 26/2993 1/71 NA NA protein folding YIL142W GO:0042493 0.021049114600735 63/2993 1/71 NA NA response to drug YER117W GO:0000398 0.0173738723688607 52/2993 1/71 NA NA nuclear mRNA splicing, via spliceosome YEL026W GO:0006468 0.0304042766455062 91/2993 1/71 NA NA protein amino acid phosphorylation YLR248W GO:0007232 0.000334112930170398 1/2993 1/71 NA NA osmosensory signaling pathway via Sho1 osmosensor YER118C GO:0000027 0.0100233879051119 30/2993 3/71 0.0328548418274178 1 ribosomal large subunit assembly and maintenance YLR448W YML073C YOL127W GO:0006696 0.00768459739391914 23/2993 1/71 NA NA ergosterol biosynthetic process YML008C GO:0006364 0.0106916137654527 32/2993 2/71 0.175017839589913 1 rRNA processing YDR365C YMR229C GO:0000290 0.00233879051119278 7/2993 1/71 NA NA deadenylation-dependent decapping YER035W GO:0019933 0.00100233879051119 3/2993 1/71 NA NA cAMP-mediated signaling YGL248W GO:0006893 0.00467758102238557 14/2993 1/71 NA NA Golgi to plasma membrane transport YMR079W GO:0006413 0.00935516204477113 28/2993 2/71 0.141471054329615 1 translational initiation YER025W YMR309C GO:0006865 0.00501169395255596 15/2993 1/71 NA NA amino acid transport YBR132C GO:0005978 0.00200467758102239 6/2993 1/71 NA NA glycogen biosynthetic process YKR058W GO:0046488 0.000334112930170398 1/2993 1/71 NA NA phosphatidylinositol metabolic process YMR079W GO:0007010 0.00467758102238557 14/2993 1/71 NA NA cytoskeleton organization and biogenesis YIL142W GO:0006412 0.0811894420314066 243/2993 36/71 8.24226520627544e-022 3.46175138663568e-020 translation YBL087C YBR191W YDL081C YDL082W YDL191W YDR064W YDR450W YER074W YER102W YER117W YER131W YGL103W YGL135W YGL147C YIL052C YJL190C YJR145C YKL006W YKL156W YKR057W YLR048W YLR448W YML024W YML026C YML063W YML073C YMR142C YMR194W YNL067W YNL301C YOL127W YOR182C YOR312C YOR369C YPL079W YPL090C GO:0031118 0.00100233879051119 3/2993 1/71 NA NA rRNA pseudouridine synthesis YLR175W GO:0006606 0.00735048446374875 22/2993 1/71 NA NA protein import into nucleus YMR308C GO:0015879 0.000334112930170398 1/2993 1/71 NA NA carnitine transport YBR132C GO:0006400 0.00634814567323755 19/2993 1/71 NA NA tRNA modification YPL086C GO:0008150 0.0180420982292015 54/2993 1/71 NA NA biological_process YNL067W GO:0030150 0.00501169395255596 15/2993 2/71 0.0477408327786712 1 protein import into mitochondrial matrix YJL143W YLR008C GO:0006406 0.0136986301369863 41/2993 1/71 NA NA mRNA export from nucleus YMR308C GO:0015846 0.00267290344136318 8/2993 1/71 NA NA polyamine transport YBR132C GO:0006970 0.0103575008352823 31/2993 1/71 NA NA response to osmotic stress YBR132C GO:0006414 0.00534580688272636 16/2993 4/71 0.000426762383847642 0.0179240201216009 translational elongation YDL081C YDR385W YJL102W YKL081W GO:0006434 0.000668225860340795 2/2993 1/71 NA NA seryl-tRNA aminoacylation YDR023W GO:0000028 0.00367524223187437 11/2993 2/71 0.026576109210302 1 ribosomal small subunit assembly and maintenance YLR048W YML024W GO:0006357 0.0203808887403943 61/2993 1/71 NA NA regulation of transcription from RNA polymerase II promoter YPL086C GO:0042254 0.0370865352489141 111/2993 8/71 0.00421029548143769 0.176832410220383 ribosome biogenesis and assembly YDR365C YEL026W YHR089C YLR129W YLR175W YMR229C YMR309C YOR312C GO:0015914 0.00167056465085199 5/2993 2/71 0.00529821362254135 0.222524972146737 phospholipid transport YJL145W YMR079W GO:0006631 0.00400935516204477 12/2993 1/71 NA NA fatty acid metabolic process YBR132C GO:0006810 0.0147009689274975 44/2993 1/71 NA NA transport YLR083C GO:0006916 0.000334112930170398 1/2993 1/71 NA NA anti-apoptosis YLR150W GO:0040020 0.00367524223187437 11/2993 1/71 NA NA regulation of meiosis YLR248W GO:0006365 0.0200467758102239 60/2993 5/71 0.0129382054010418 0.543404626843755 35S primary transcript processing YGR158C YHR089C YLR175W YMR229C YPR112C GO:0006402 0.00968927497494153 29/2993 1/71 NA NA mRNA catabolic process YGR158C GO:0007231 0.00200467758102239 6/2993 1/71 NA NA osmosensory signaling pathway YLR248W GO:0006888 0.0106916137654527 32/2993 1/71 NA NA ER to Golgi vesicle-mediated transport YER074W GO:0030490 0.0106916137654527 32/2993 4/71 0.00633124011504489 0.265912084831885 processing of 20S pre-rRNA YEL026W YJR145C YLR129W YMR229C GO:0006383 0.00701637153357835 21/2993 1/71 NA NA transcription from RNA polymerase III promoter YKL144C GO:0000723 0.0547945205479452 164/2993 12/71 0.000370237466331125 0.0155499735859072 telomere maintenance YBR132C YDL081C YDR450W YGL135W YIL052C YJL190C YJR145C YKR057W YLR150W YML024W YMR142C YOR182C Total number of genes: 2993 Total number of Study genes: 71 Total number of Study gene GMRG terms (pop non-singletons): 48 (42) Genes with GMRG information: 69 Genes with no GMRG information: 2 These are: YBR084C-A YHR143W-A Bicluster # 14 GeneMerge v1.2; C:\AGO\AGB_FV_Sin_Traslape\GOAGB_FV_Sin_Traslapecluster14.txt Gene Association File: S_cerevisiae.BP Description File: GO.BP.use Population File: pop.txt Study File: C:\AGO\AGB_FV_Sin_Traslape\AGB_FV_Sin_Traslapecluster14.txt GMRG_Term Pop_freq Pop_frac Study_frac Raw_es e-score Description Contributing_genes GO:0030437 0.0113598396257935 34/2993 1/33 NA NA sporulation (sensu Fungi) YHL027W GO:0006526 0.00334112930170398 10/2993 1/33 NA NA arginine biosynthetic process YJL088W GO:0045821 0.00100233879051119 3/2993 1/33 NA NA positive regulation of glycolysis YOR344C GO:0000096 0.00200467758102239 6/2993 1/33 NA NA sulfur amino acid metabolic process YPL273W GO:0000743 0.00100233879051119 3/2993 1/33 NA NA nuclear migration during conjugation with cellular fusion YML124C GO:0007031 0.00534580688272636 16/2993 1/33 NA NA peroxisome organization and biogenesis YDR244W GO:0007129 0.00167056465085199 5/2993 1/33 NA NA synapsis YDR285W GO:0009268 0.00100233879051119 3/2993 1/33 NA NA response to pH YHL027W GO:0045143 0.00100233879051119 3/2993 1/33 NA NA homologous chromosome segregation YML124C GO:0006468 0.0304042766455062 91/2993 1/33 NA NA protein amino acid phosphorylation YLL019C GO:0030148 0.00501169395255596 15/2993 1/33 NA NA sphingolipid biosynthetic process YGR143W GO:0000910 0.0113598396257935 34/2993 1/33 NA NA cytokinesis YBR143C GO:0007047 0.021049114600735 63/2993 1/33 NA NA cell wall organization and biogenesis YGR143W GO:0006413 0.00935516204477113 28/2993 2/33 0.0372752697496721 1 translational initiation YMR309C YOR361C GO:0006003 0.000668225860340795 2/2993 1/33 NA NA fructose 2,6-bisphosphate metabolic process YIL107C GO:0006350 0.00902104911460073 27/2993 1/33 NA NA transcription YOR344C GO:0006412 0.0811894420314066 243/2993 9/33 0.000899279761115061 0.0359711904446024 translation YBR031W YDR012W YER131W YGR118W YHR064C YHR203C YLR048W YMR257C YNL209W GO:0016575 0.00634814567323755 19/2993 1/33 NA NA histone deacetylation YMR053C GO:0006414 0.00534580688272636 16/2993 1/33 NA NA translational elongation YBR118W GO:0000752 0.00100233879051119 3/2993 1/33 NA NA agglutination during conjugation with cellular fusion YJR004C GO:0016556 0.000334112930170398 1/2993 1/33 NA NA mRNA modification YGL192W GO:0030473 0.00334112930170398 10/2993 1/33 NA NA nuclear migration, microtubule-mediated YML124C GO:0006110 0.000668225860340795 2/2993 1/33 NA NA regulation of glycolysis YIL107C GO:0006450 0.00334112930170398 10/2993 3/33 0.000139115514400531 0.00556462057602124 regulation of translational fidelity YGR118W YHR064C YNL209W GO:0051083 0.00167056465085199 5/2993 1/33 NA NA cotranslational protein folding YNL209W GO:0000122 0.0113598396257935 34/2993 1/33 NA NA negative regulation of transcription from RNA polymerase II promoter YHL027W GO:0000028 0.00367524223187437 11/2993 1/33 NA NA ribosomal small subunit assembly and maintenance YLR048W GO:0000070 0.0100233879051119 30/2993 1/33 NA NA mitotic sister chromatid segregation YML124C GO:0042254 0.0370865352489141 111/2993 3/33 0.121436960214919 1 ribosome biogenesis and assembly YDR324C YJL109C YMR309C GO:0000083 0.00300701637153358 9/2993 1/33 NA NA G1/S-specific transcription in mitotic cell cycle YOR344C GO:0006883 0.000668225860340795 2/2993 1/33 NA NA sodium ion homeostasis YDR436W GO:0006625 0.00200467758102239 6/2993 1/33 NA NA protein targeting to peroxisome YDR244W GO:0006591 0.000334112930170398 1/2993 1/33 NA NA ornithine metabolic process YJL088W GO:0009272 0.00100233879051119 3/2993 1/33 NA NA cell wall biosynthetic process (sensu Fungi) YHL027W GO:0006415 0.00100233879051119 3/2993 1/33 NA NA translational termination YBR143C GO:0006365 0.0200467758102239 60/2993 1/33 NA NA 35S primary transcript processing YGL171W GO:0006409 0.00902104911460073 27/2993 1/33 NA NA tRNA export from nucleus YBR118W GO:0006078 0.00100233879051119 3/2993 1/33 NA NA 1,6-beta-glucan biosynthetic process YGR143W GO:0006446 0.00300701637153358 9/2993 1/33 NA NA regulation of translational initiation YER165W GO:0007126 0.0113598396257935 34/2993 2/33 0.0531079798114913 1 meiosis YGL192W YHL027W GO:0030490 0.0106916137654527 32/2993 2/33 0.0475971639933738 1 processing of 20S pre-rRNA YDR324C YJL109C GO:0000723 0.0547945205479452 164/2993 2/33 0.547635401634753 1 telomere maintenance YGR118W YHR203C Total number of genes: 2993 Total number of Study genes: 33 Total number of Study gene GMRG terms (pop non-singletons): 42 (40) Genes with GMRG information: 31 Genes with no GMRG information: 2 These are: YFR031C-A YJR094W-A Bicluster # 15 GeneMerge v1.2; C:\AGO\AGB_FV_Sin_Traslape\GOAGB_FV_Sin_Traslapecluster15.txt Gene Association File: S_cerevisiae.BP Description File: GO.BP.use Population File: pop.txt Study File: C:\AGO\AGB_FV_Sin_Traslape\AGB_FV_Sin_Traslapecluster15.txt GMRG_Term Pop_freq Pop_frac Study_frac Raw_es e-score Description Contributing_genes GO:0030489 0.00233879051119278 7/2993 1/56 NA NA processing of 27S pre-rRNA YGL120C GO:0006360 0.00801871032408954 24/2993 2/56 0.072995261184133 1 transcription from RNA polymerase I promoter YJL148W YPR110C GO:0000162 0.00334112930170398 10/2993 1/56 NA NA tryptophan biosynthetic process YBL068W GO:0009051 0.00133645172068159 4/2993 1/56 NA NA pentose-phosphate shunt, oxidative branch YHR183W GO:0009082 0.00233879051119278 7/2993 1/56 NA NA branched chain family amino acid biosynthetic process YJR016C GO:0008654 0.00434346809221517 13/2993 1/56 NA NA phospholipid biosynthetic process YDR018C GO:0006421 0.000334112930170398 1/2993 1/56 NA NA asparaginyl-tRNA aminoacylation YHR019C GO:0006423 0.000334112930170398 1/2993 1/56 NA NA cysteinyl-tRNA aminoacylation YNL247W GO:0006623 0.00668225860340795 20/2993 1/56 NA NA protein targeting to vacuole YBL078C GO:0019740 0.00267290344136318 8/2993 1/56 NA NA nitrogen utilization YNR002C GO:0006914 0.00267290344136318 8/2993 1/56 NA NA autophagy YBL078C GO:0042273 0.00200467758102239 6/2993 1/56 NA NA ribosomal large subunit biogenesis and assembly YGL120C GO:0030148 0.00501169395255596 15/2993 1/56 NA NA sphingolipid biosynthetic process YDR062W GO:0000027 0.0100233879051119 30/2993 2/56 0.107240787294473 1 ribosomal large subunit assembly and maintenance YDR418W YOL127W GO:0006364 0.0106916137654527 32/2993 3/56 0.0209683506100096 1 rRNA processing YGL120C YLR002C YMR302C GO:0000290 0.00233879051119278 7/2993 1/56 NA NA deadenylation-dependent decapping YER035W GO:0000161 0.000334112930170398 1/2993 1/56 NA NA MAPKKK cascade during osmolarity sensing YCL032W GO:0006413 0.00935516204477113 28/2993 3/56 0.014596681451143 1 translational initiation YJL138C YKR059W YMR309C GO:0006979 0.0126962913464751 38/2993 1/56 NA NA response to oxidative stress YHR183W GO:0046686 0.00133645172068159 4/2993 1/56 NA NA response to cadmium ion YDR423C GO:0006534 0.000668225860340795 2/2993 1/56 NA NA cysteine metabolic process YNL247W GO:0045944 0.0160374206481791 48/2993 2/56 0.226085261501811 1 positive regulation of transcription from RNA polymerase II promoter YDR423C YHR006W GO:0006436 0.000668225860340795 2/2993 1/56 NA NA tryptophanyl-tRNA aminoacylation YOL097C GO:0006412 0.0811894420314066 243/2993 8/56 0.0797183628082942 1 translation YDR237W YDR341C YDR418W YHL033C YHR064C YLR333C YML063W YOL127W GO:0031118 0.00100233879051119 3/2993 1/56 NA NA rRNA pseudouridine synthesis YLR175W GO:0006606 0.00735048446374875 22/2993 2/56 0.0625500996534887 1 protein import into nucleus YJR132W YMR308C GO:0006629 0.00367524223187437 11/2993 1/56 NA NA lipid metabolic process YBR177C GO:0000147 0.00400935516204477 12/2993 1/56 NA NA actin cortical patch assembly YKL013C GO:0006430 0.000668225860340795 2/2993 1/56 NA NA lysyl-tRNA aminoacylation YDR037W GO:0015696 0.00200467758102239 6/2993 1/56 NA NA ammonium transport YNR002C GO:0000391 0.00100233879051119 3/2993 1/56 NA NA U2-dependent spliceosome disassembly YGL120C GO:0006574 0.000334112930170398 1/2993 1/56 NA NA valine catabolic process YFL018C GO:0042254 0.0370865352489141 111/2993 8/56 0.000892975714139282 0.0660802028463069 ribosome biogenesis and assembly YBL068W YGL120C YJL148W YLR002C YLR175W YMR309C YNL247W YPR110C GO:0000001 0.00634814567323755 19/2993 1/56 NA NA mitochondrion inheritance YKL013C GO:0015940 0.00267290344136318 8/2993 1/56 NA NA pantothenate biosynthetic process YLR146C GO:0018063 0.000668225860340795 2/2993 1/56 NA NA cytochrome c-heme linkage YKL087C GO:0001402 0.00200467758102239 6/2993 1/56 NA NA signal transduction during filamentous growth YCL032W GO:0006365 0.0200467758102239 60/2993 4/56 0.0246752337668011 1 35S primary transcript processing YCR035C YGL120C YGR195W YLR175W GO:0006402 0.00968927497494153 29/2993 2/56 0.101266089757552 1 mRNA catabolic process YCR035C YGR195W GO:0030490 0.0106916137654527 32/2993 1/56 NA NA processing of 20S pre-rRNA YGL120C GO:0006879 0.00668225860340795 20/2993 1/56 NA NA iron ion homeostasis YPL135W GO:0006338 0.0106916137654527 32/2993 1/56 NA NA chromatin remodeling YDR190C GO:0007035 0.00534580688272636 16/2993 1/56 NA NA vacuolar acidification YEL051W GO:0006597 0.000668225860340795 2/2993 1/56 NA NA spermine biosynthetic process YLR146C GO:0000105 0.00467758102238557 14/2993 1/56 NA NA histidine biosynthetic process YBL068W GO:0006564 0.000668225860340795 2/2993 1/56 NA NA L-serine biosynthetic process YFL018C GO:0042493 0.021049114600735 63/2993 2/56 0.330900659118508 1 response to drug YNL231C YOR153W GO:0016126 0.00133645172068159 4/2993 1/56 NA NA sterol biosynthetic process YNL231C GO:0000398 0.0173738723688607 52/2993 1/56 NA NA nuclear mRNA splicing, via spliceosome YGR075C GO:0032447 0.000668225860340795 2/2993 1/56 NA NA protein urmylation YGR200C GO:0006546 0.000668225860340795 2/2993 1/56 NA NA glycine catabolic process YFL018C GO:0006270 0.00835282325425994 25/2993 1/56 NA NA DNA replication initiation YLR002C GO:0016226 0.00200467758102239 6/2993 1/56 NA NA iron-sulfur cluster assembly YPL135W GO:0006865 0.00501169395255596 15/2993 1/56 NA NA amino acid transport YBR069C GO:0006400 0.00634814567323755 19/2993 1/56 NA NA tRNA modification YGR200C GO:0000002 0.00701637153357835 21/2993 1/56 NA NA mitochondrial genome maintenance YMR302C GO:0051791 0.000334112930170398 1/2993 1/56 NA NA medium-chain fatty acid metabolic process YBR177C GO:0006207 0.00167056465085199 5/2993 1/56 NA NA 'de novo' pyrimidine base biosynthetic process YBL068W GO:0006406 0.0136986301369863 41/2993 1/56 NA NA mRNA export from nucleus YMR308C GO:0006501 0.000668225860340795 2/2993 1/56 NA NA C-terminal protein lipidation YBL078C GO:0006355 0.00768459739391914 23/2993 1/56 NA NA regulation of transcription, DNA-dependent YFL028C GO:0006166 0.00167056465085199 5/2993 1/56 NA NA purine ribonucleoside salvage YBL068W GO:0006414 0.00534580688272636 16/2993 1/56 NA NA translational elongation YDR385W GO:0043330 0.00233879051119278 7/2993 1/56 NA NA response to exogenous dsRNA YGR195W GO:0006450 0.00334112930170398 10/2993 1/56 NA NA regulation of translational fidelity YHR064C GO:0006425 0.000334112930170398 1/2993 1/56 NA NA glutaminyl-tRNA aminoacylation YOR168W GO:0051083 0.00167056465085199 5/2993 1/56 NA NA cotranslational protein folding YPL037C GO:0006357 0.0203808887403943 61/2993 2/56 0.317007597329906 1 regulation of transcription from RNA polymerase II promoter YDR190C YGR200C GO:0015805 0.000668225860340795 2/2993 1/56 NA NA S-adenosylmethionine transport YPL274W GO:0015914 0.00167056465085199 5/2993 1/56 NA NA phospholipid transport YNL231C GO:0006189 0.00200467758102239 6/2993 1/56 NA NA 'de novo' IMP biosynthetic process YBL068W GO:0019236 0.000668225860340795 2/2993 1/56 NA NA response to pheromone YCL032W GO:0006366 0.0140327430671567 42/2993 1/56 NA NA transcription from RNA polymerase II promoter YOR151C GO:0015893 0.00133645172068159 4/2993 1/56 NA NA drug transport YOR153W GO:0006446 0.00300701637153358 9/2993 1/56 NA NA regulation of translational initiation YJL138C GO:0006552 0.000668225860340795 2/2993 1/56 NA NA leucine catabolic process YFL018C GO:0006086 0.000668225860340795 2/2993 1/56 NA NA acetyl-CoA biosynthetic process from pyruvate YFL018C GO:0000750 0.00801871032408954 24/2993 1/56 NA NA pheromone-dependent signal transduction during conjugation with cellular fusion YCL032W GO:0006383 0.00701637153357835 21/2993 1/56 NA NA transcription from RNA polymerase III promoter YPR110C GO:0000723 0.0547945205479452 164/2993 2/56 0.82180329491699 1 telomere maintenance YDR418W YKR059W GO:0006550 0.000334112930170398 1/2993 1/56 NA NA isoleucine catabolic process YFL018C Total number of genes: 2993 Total number of Study genes: 56 Total number of Study gene GMRG terms (pop non-singletons): 81 (74) Genes with GMRG information: 55 Genes with no GMRG information: 1 These are: YHR143W-A Bicluster # 16 GeneMerge v1.2; C:\AGO\AGB_FV_Sin_Traslape\GOAGB_FV_Sin_Traslapecluster16.txt Gene Association File: S_cerevisiae.BP Description File: GO.BP.use Population File: pop.txt Study File: C:\AGO\AGB_FV_Sin_Traslape\AGB_FV_Sin_Traslapecluster16.txt GMRG_Term Pop_freq Pop_frac Study_frac Raw_es e-score Description Contributing_genes GO:0007124 0.0167056465085199 50/2993 2/70 0.32744884324782 1 pseudohyphal growth YER118C YHR084W GO:0030489 0.00233879051119278 7/2993 1/70 NA NA processing of 27S pre-rRNA YGL120C GO:0000747 0.00467758102238557 14/2993 2/70 0.0409333114138145 1 conjugation with cellular fusion YGL099W YHR084W GO:0030259 0.000334112930170398 1/2993 1/70 NA NA lipid glycosylation YGL225W GO:0030437 0.0113598396257935 34/2993 2/70 0.18810505743052 1 sporulation (sensu Fungi) YER096W YGL099W GO:0006426 0.000668225860340795 2/2993 1/70 NA NA glycyl-tRNA aminoacylation YBR121C GO:0006360 0.00801871032408954 24/2993 2/70 0.107036615283224 1 transcription from RNA polymerase I promoter YNL248C YOR224C GO:0000162 0.00334112930170398 10/2993 1/70 NA NA tryptophan biosynthetic process YGL026C GO:0009082 0.00233879051119278 7/2993 1/70 NA NA branched chain family amino acid biosynthetic process YHR208W GO:0001403 0.0100233879051119 30/2993 1/70 NA NA invasive growth (sensu Saccharomyces) YHR084W GO:0006623 0.00668225860340795 20/2993 1/70 NA NA protein targeting to vacuole YNL093W GO:0009749 0.00167056465085199 5/2993 1/70 NA NA response to glucose stimulus YNL154C GO:0042273 0.00200467758102239 6/2993 1/70 NA NA ribosomal large subunit biogenesis and assembly YGL120C GO:0007103 0.00334112930170398 10/2993 1/70 NA NA spindle pole body duplication in nuclear envelope YML031W GO:0006457 0.00868693618443034 26/2993 3/70 0.0216751487342559 1 protein folding YBL075C YJL014W YJR064W GO:0048017 0.00400935516204477 12/2993 1/70 NA NA inositol lipid-mediated signaling YKL212W GO:0006353 0.000668225860340795 2/2993 1/70 NA NA transcription termination YBR121C GO:0008299 0.00100233879051119 3/2993 1/70 NA NA isoprenoid biosynthetic process YNR043W GO:0006432 0.000668225860340795 2/2993 1/70 NA NA phenylalanyl-tRNA aminoacylation YLR060W GO:0016075 0.00100233879051119 3/2993 1/70 NA NA rRNA catabolic process YJL050W GO:0000027 0.0100233879051119 30/2993 4/70 0.00475152666327519 0.451395033011143 ribosomal large subunit assembly and maintenance YLL008W YLR276C YLR340W YPR102C GO:0006364 0.0106916137654527 32/2993 2/70 0.171181174805278 1 rRNA processing YGL120C YMR302C GO:0006348 0.0133645172068159 40/2993 1/70 NA NA chromatin silencing at telomere YJL080C GO:0000290 0.00233879051119278 7/2993 1/70 NA NA deadenylation-dependent decapping YER035W GO:0006413 0.00935516204477113 28/2993 1/70 NA NA translational initiation YKR059W GO:0006979 0.0126962913464751 38/2993 1/70 NA NA response to oxidative stress YKL026C GO:0006412 0.0811894420314066 243/2993 10/70 0.0536222466349547 1 translation YBR031W YDR341C YHR064C YIL018W YJL190C YLR192C YLR340W YNL209W YOR369C YPR102C GO:0031118 0.00100233879051119 3/2993 1/70 NA NA rRNA pseudouridine synthesis YLR175W GO:0006606 0.00735048446374875 22/2993 4/70 0.00146033420519466 0.138731749493493 protein import into nucleus YER009W YGL016W YML031W YMR308C GO:0006487 0.0100233879051119 30/2993 3/70 0.0316778871480403 1 protein amino acid N-linked glycosylation YGL225W YIL085C YJL002C GO:0007059 0.00902104911460073 27/2993 1/70 NA NA chromosome segregation YJL080C GO:0006616 0.00267290344136318 8/2993 1/70 NA NA SRP-dependent cotranslational protein targeting to membrane, translocation YBL075C GO:0045141 0.000668225860340795 2/2993 1/70 NA NA telomere clustering YJL080C GO:0000391 0.00100233879051119 3/2993 1/70 NA NA U2-dependent spliceosome disassembly YGL120C GO:0042254 0.0370865352489141 111/2993 9/70 0.000934066511221516 0.088736318566044 ribosome biogenesis and assembly YGL099W YGL120C YHR196W YJL050W YLL008W YLR175W YLR276C YLR409C YNL248C GO:0006511 0.0170397594386903 51/2993 1/70 NA NA ubiquitin-dependent protein catabolic process YOR259C GO:0043634 0.00133645172068159 4/2993 1/70 NA NA polyadenylation-dependent ncRNA catabolic process YJL050W GO:0005975 0.00367524223187437 11/2993 1/70 NA NA carbohydrate metabolic process YDR272W GO:0042256 0.000334112930170398 1/2993 1/70 NA NA mature ribosome assembly YPR041W GO:0006810 0.0147009689274975 44/2993 2/70 0.275053054040121 1 transport YLR083C YOL163W GO:0000902 0.00367524223187437 11/2993 1/70 NA NA cell morphogenesis YNL154C GO:0030466 0.00768459739391914 23/2993 1/70 NA NA chromatin silencing at silent mating-type cassette YJL080C GO:0000321 0.00100233879051119 3/2993 1/70 NA NA re-entry into mitotic cell cycle after pheromone arrest YIL122W GO:0008298 0.00300701637153358 9/2993 1/70 NA NA intracellular mRNA localization YJL080C GO:0046967 0.000334112930170398 1/2993 1/70 NA NA cytosol to ER transport YOR254C GO:0000054 0.00167056465085199 5/2993 1/70 NA NA ribosome export from nucleus YGL099W GO:0015780 0.000668225860340795 2/2993 1/70 NA NA nucleotide-sugar transport YGL225W GO:0006529 0.000668225860340795 2/2993 1/70 NA NA asparagine biosynthetic process YGR124W GO:0006415 0.00100233879051119 3/2993 1/70 NA NA translational termination YBR143C GO:0006365 0.0200467758102239 60/2993 7/70 0.000407065441412507 0.0386712169341882 35S primary transcript processing YGL120C YJL050W YLL008W YLL011W YLR175W YLR276C YLR409C GO:0008645 0.00534580688272636 16/2993 1/70 NA NA hexose transport YHR096C GO:0006566 0.00167056465085199 5/2993 1/70 NA NA threonine metabolic process YCR053W GO:0007020 0.00768459739391914 23/2993 1/70 NA NA microtubule nucleation YML031W GO:0045722 0.000668225860340795 2/2993 1/70 NA NA positive regulation of gluconeogenesis YJL089W GO:0008033 0.00434346809221517 13/2993 1/70 NA NA tRNA processing YDL051W GO:0006913 0.00233879051119278 7/2993 1/70 NA NA nucleocytoplasmic transport YER009W GO:0006493 0.00467758102238557 14/2993 1/70 NA NA protein amino acid O-linked glycosylation YGL257C GO:0006620 0.00167056465085199 5/2993 1/70 NA NA posttranslational protein targeting to membrane YOR254C GO:0030490 0.0106916137654527 32/2993 4/70 0.00601947113575768 0.57184975789698 processing of 20S pre-rRNA YGL120C YHR196W YLL011W YLR192C GO:0006769 0.000334112930170398 1/2993 1/70 NA NA nicotinamide metabolic process YLR285W GO:0006097 0.00133645172068159 4/2993 1/70 NA NA glyoxylate cycle YNL117W GO:0000154 0.00367524223187437 11/2993 1/70 NA NA rRNA modification YLL011W GO:0017157 0.000334112930170398 1/2993 1/70 NA NA regulation of exocytosis YKL212W GO:0043630 0.00100233879051119 3/2993 1/70 NA NA ncRNA polyadenylation during polyadenylation-dependent ncRNA catabolic process YJL050W GO:0042493 0.021049114600735 63/2993 3/70 0.181459770443665 1 response to drug YGL016W YIL018W YJL080C GO:0008361 0.00634814567323755 19/2993 2/70 0.071396222293809 1 regulation of cell size YGL016W YNL248C GO:0006468 0.0304042766455062 91/2993 1/70 NA NA protein amino acid phosphorylation YNL154C GO:0016078 0.000668225860340795 2/2993 1/70 NA NA tRNA catabolic process YJL050W GO:0000910 0.0113598396257935 34/2993 2/70 0.18810505743052 1 cytokinesis YBR143C YNL154C GO:0007232 0.000334112930170398 1/2993 1/70 NA NA osmosensory signaling pathway via Sho1 osmosensor YER118C GO:0006816 0.00167056465085199 5/2993 1/70 NA NA calcium ion transport YNL291C GO:0006696 0.00768459739391914 23/2993 1/70 NA NA ergosterol biosynthetic process YNR043W GO:0007047 0.021049114600735 63/2993 1/70 NA NA cell wall organization and biogenesis YIL085C GO:0006614 0.000334112930170398 1/2993 1/70 NA NA SRP-dependent cotranslational protein targeting to membrane YOR254C GO:0006508 0.00534580688272636 16/2993 1/70 NA NA proteolysis YDR144C GO:0046855 0.000668225860340795 2/2993 1/70 NA NA inositol phosphate dephosphorylation YDR287W GO:0007010 0.00467758102238557 14/2993 2/70 0.0409333114138145 1 cytoskeleton organization and biogenesis YJL014W YJR064W GO:0006400 0.00634814567323755 19/2993 1/70 NA NA tRNA modification YPL086C GO:0000002 0.00701637153357835 21/2993 1/70 NA NA mitochondrial genome maintenance YMR302C GO:0006406 0.0136986301369863 41/2993 2/70 0.24875768835838 1 mRNA export from nucleus YJL050W YMR308C GO:0006950 0.0180420982292015 54/2993 1/70 NA NA response to stress YBL075C GO:0006414 0.00534580688272636 16/2993 1/70 NA NA translational elongation YLR340W GO:0006450 0.00334112930170398 10/2993 2/70 0.02149538526192 1 regulation of translational fidelity YHR064C YNL209W GO:0006530 0.00167056465085199 5/2993 1/70 NA NA asparagine catabolic process YDR321W GO:0006405 0.00167056465085199 5/2993 1/70 NA NA RNA export from nucleus YML031W GO:0051083 0.00167056465085199 5/2993 1/70 NA NA cotranslational protein folding YNL209W GO:0006031 0.000668225860340795 2/2993 1/70 NA NA chitin biosynthetic process YER096W GO:0006357 0.0203808887403943 61/2993 2/70 0.420502350344973 1 regulation of transcription from RNA polymerase II promoter YJL089W YPL086C GO:0000083 0.00300701637153358 9/2993 1/70 NA NA G1/S-specific transcription in mitotic cell cycle YIL122W GO:0006897 0.0183762111593719 55/2993 3/70 0.136218483970193 1 endocytosis YCR053W YNL093W YNL154C GO:0000183 0.00367524223187437 11/2993 1/70 NA NA chromatin silencing at rDNA YLR285W GO:0009083 0.000668225860340795 2/2993 1/70 NA NA branched chain family amino acid catabolic process YHR208W GO:0018279 0.000668225860340795 2/2993 1/70 NA NA protein amino acid N-linked glycosylation via asparagine YJL002C GO:0019243 0.00100233879051119 3/2993 1/70 NA NA methylglyoxal catabolic process to D-lactate YDR272W GO:0006366 0.0140327430671567 42/2993 1/70 NA NA transcription from RNA polymerase II promoter YOR224C GO:0006446 0.00300701637153358 9/2993 2/70 0.01745776183989 1 regulation of translational initiation YLR291C YPR041W GO:0006751 0.000334112930170398 1/2993 1/70 NA NA glutathione catabolic process YLR299W GO:0007329 0.00133645172068159 4/2993 1/70 NA NA positive regulation of transcription from RNA polymerase II promoter by pheromones YHR084W GO:0046856 0.00200467758102239 6/2993 1/70 NA NA phosphoinositide dephosphorylation YKL212W GO:0000750 0.00801871032408954 24/2993 1/70 NA NA pheromone-dependent signal transduction during conjugation with cellular fusion YJL080C GO:0006383 0.00701637153357835 21/2993 1/70 NA NA transcription from RNA polymerase III promoter YOR224C GO:0006887 0.00601403274306716 18/2993 1/70 NA NA exocytosis YKL212W GO:0000723 0.0547945205479452 164/2993 3/70 0.748391515584057 1 telomere maintenance YJL190C YKR059W YLR192C Total number of genes: 2993 Total number of Study genes: 70 Total number of Study gene GMRG terms (pop non-singletons): 103 (95) Genes with GMRG information: 70 Genes with no GMRG information: These are: Bicluster # 17 GeneMerge v1.2; C:\AGO\AGB_FV_Sin_Traslape\GOAGB_FV_Sin_Traslapecluster17.txt Gene Association File: S_cerevisiae.BP Description File: GO.BP.use Population File: pop.txt Study File: C:\AGO\AGB_FV_Sin_Traslape\AGB_FV_Sin_Traslapecluster17.txt GMRG_Term Pop_freq Pop_frac Study_frac Raw_es e-score Description Contributing_genes GO:0006118 0.00267290344136318 8/2993 1/53 NA NA electron transport YML054C GO:0045821 0.00100233879051119 3/2993 1/53 NA NA positive regulation of glycolysis YNL199C GO:0009098 0.00167056465085199 5/2993 1/53 NA NA leucine biosynthetic process YOR108W GO:0006623 0.00668225860340795 20/2993 1/53 NA NA protein targeting to vacuole YBL078C GO:0006914 0.00267290344136318 8/2993 1/53 NA NA autophagy YBL078C GO:0006796 0.00133645172068159 4/2993 1/53 NA NA phosphate metabolic process YBR092C GO:0030472 0.00668225860340795 20/2993 1/53 NA NA mitotic spindle organization and biogenesis in nucleus YPL152W GO:0006006 0.00467758102238557 14/2993 1/53 NA NA glucose metabolic process YHR043C GO:0042493 0.021049114600735 63/2993 1/53 NA NA response to drug YGR155W GO:0015908 0.00100233879051119 3/2993 1/53 NA NA fatty acid transport YKL188C GO:0007165 0.00935516204477113 28/2993 1/53 NA NA signal transduction YGL121C GO:0030433 0.00567991981289676 17/2993 1/53 NA NA ER-associated protein catabolic process YHR043C GO:0000027 0.0100233879051119 30/2993 3/53 0.0151940767180351 0.805286066055863 ribosomal large subunit assembly and maintenance YEL054C YGR085C YOR063W GO:0008614 0.00133645172068159 4/2993 1/53 NA NA pyridoxine metabolic process YNL333W GO:0042144 0.00434346809221517 13/2993 1/53 NA NA vacuole fusion, non-autophagic YNL015W GO:0000290 0.00233879051119278 7/2993 1/53 NA NA deadenylation-dependent decapping YLR270W GO:0006413 0.00935516204477113 28/2993 4/53 0.00131024537747182 0.0694430050060063 translational initiation YGR162W YJL138C YKR059W YMR146C GO:0006626 0.00167056465085199 5/2993 1/53 NA NA protein targeting to mitochondrion YGR028W GO:0006865 0.00501169395255596 15/2993 1/53 NA NA amino acid transport YNL101W GO:0006749 0.00133645172068159 4/2993 1/53 NA NA glutathione metabolic process YIR038C GO:0006508 0.00534580688272636 16/2993 1/53 NA NA proteolysis YDR144C GO:0001302 0.00701637153357835 21/2993 1/53 NA NA replicative cell aging YHL003C GO:0045944 0.0160374206481791 48/2993 2/53 0.208268663467649 1 positive regulation of transcription from RNA polymerase II promoter YNL199C YOR162C GO:0006412 0.0811894420314066 243/2993 14/53 5.03914662382523e-005 0.00267074771062737 translation YDL083C YDR025W YDR382W YEL054C YGL147C YGR034W YGR085C YGR214W YJL190C YJR123W YJR145C YLR061W YLR367W YOR063W GO:0000082 0.0103575008352823 31/2993 1/53 NA NA G1/S transition of mitotic cell cycle YGL229C GO:0019344 0.000668225860340795 2/2993 1/53 NA NA cysteine biosynthetic process YGR155W GO:0042723 0.000334112930170398 1/2993 1/53 NA NA thiamin and derivative metabolic process YBR092C GO:0000002 0.00701637153357835 21/2993 1/53 NA NA mitochondrial genome maintenance YMR072W GO:0006487 0.0100233879051119 30/2993 1/53 NA NA protein amino acid N-linked glycosylation YPL050C GO:0006419 0.000334112930170398 1/2993 1/53 NA NA alanyl-tRNA aminoacylation YOR335C GO:0008150 0.0180420982292015 54/2993 2/53 0.247771458886341 1 biological_process YML054C YPL152W GO:0006855 0.00167056465085199 5/2993 1/53 NA NA multidrug transport YOR162C GO:0006629 0.00367524223187437 11/2993 1/53 NA NA lipid metabolic process YDR058C GO:0006561 0.00100233879051119 3/2993 1/53 NA NA proline biosynthetic process YDR300C GO:0006501 0.000668225860340795 2/2993 1/53 NA NA C-terminal protein lipidation YBL078C GO:0006970 0.0103575008352823 31/2993 1/53 NA NA response to osmotic stress YPL152W GO:0006950 0.0180420982292015 54/2993 1/53 NA NA response to stress YHR043C GO:0006414 0.00534580688272636 16/2993 2/53 0.0315086259729658 1 translational elongation YDR382W YLR069C GO:0006450 0.00334112930170398 10/2993 1/53 NA NA regulation of translational fidelity YDR025W GO:0009228 0.00400935516204477 12/2993 1/53 NA NA thiamin biosynthetic process YNL333W GO:0000028 0.00367524223187437 11/2993 2/53 0.0152792968646814 0.809802733828115 ribosomal small subunit assembly and maintenance YDR025W YGR214W GO:0000001 0.00634814567323755 19/2993 1/53 NA NA mitochondrion inheritance YMR072W GO:0042254 0.0370865352489141 111/2993 3/53 0.313615596756094 1 ribosome biogenesis and assembly YDR300C YGR162W YHR089C GO:0030162 0.000668225860340795 2/2993 1/53 NA NA regulation of proteolysis YNL015W GO:0005975 0.00367524223187437 11/2993 1/53 NA NA carbohydrate metabolic process YOR040W GO:0000715 0.00233879051119278 7/2993 1/53 NA NA nucleotide-excision repair, DNA damage recognition YJR052W GO:0042147 0.00267290344136318 8/2993 1/53 NA NA retrograde transport, endosome to Golgi YDR425W GO:0040020 0.00367524223187437 11/2993 1/53 NA NA regulation of meiosis YOR229W GO:0006365 0.0200467758102239 60/2993 1/53 NA NA 35S primary transcript processing YHR089C GO:0019243 0.00100233879051119 3/2993 1/53 NA NA methylglyoxal catabolic process to D-lactate YOR040W GO:0007034 0.00334112930170398 10/2993 1/53 NA NA vacuolar transport YNL101W GO:0006446 0.00300701637153358 9/2993 2/53 0.0102301782222482 0.542199445779154 regulation of translational initiation YGR083C YJL138C GO:0030490 0.0106916137654527 32/2993 1/53 NA NA processing of 20S pre-rRNA YJR145C GO:0046513 0.000668225860340795 2/2993 1/53 NA NA ceramide biosynthetic process YHL003C GO:0000723 0.0547945205479452 164/2993 6/53 0.0672270202303474 1 telomere maintenance YDL083C YDR300C YJL190C YJR145C YKR059W YOR040W Total number of genes: 2993 Total number of Study genes: 53 Total number of Study gene GMRG terms (pop non-singletons): 55 (53) Genes with GMRG information: 50 Genes with no GMRG information: 3 These are: YER056C-A YFR031C-A YJR094W-A Bicluster # 18 GeneMerge v1.2; C:\AGO\AGB_FV_Sin_Traslape\GOAGB_FV_Sin_Traslapecluster18.txt Gene Association File: S_cerevisiae.BP Description File: GO.BP.use Population File: pop.txt Study File: C:\AGO\AGB_FV_Sin_Traslape\AGB_FV_Sin_Traslapecluster18.txt GMRG_Term Pop_freq Pop_frac Study_frac Raw_es e-score Description Contributing_genes GO:0007124 0.0167056465085199 50/2993 1/74 NA NA pseudohyphal growth YJL164C GO:0030489 0.00233879051119278 7/2993 1/74 NA NA processing of 27S pre-rRNA YGL120C GO:0000747 0.00467758102238557 14/2993 1/74 NA NA conjugation with cellular fusion YGL099W GO:0030437 0.0113598396257935 34/2993 1/74 NA NA sporulation (sensu Fungi) YGL099W GO:0006360 0.00801871032408954 24/2993 3/74 0.0202278591567548 1 transcription from RNA polymerase I promoter YOR224C YPR110C YPR187W GO:0007021 0.00167056465085199 5/2993 1/74 NA NA tubulin folding YML094W GO:0009082 0.00233879051119278 7/2993 2/74 0.0116869778591388 0.712905649407467 branched chain family amino acid biosynthetic process YHR208W YLR355C GO:0007067 0.00200467758102239 6/2993 1/74 NA NA mitosis YBL009W GO:0018195 0.000334112930170398 1/2993 1/74 NA NA peptidyl-arginine modification YBR034C GO:0042273 0.00200467758102239 6/2993 1/74 NA NA ribosomal large subunit biogenesis and assembly YGL120C GO:0000184 0.00200467758102239 6/2993 1/74 NA NA mRNA catabolic process, nonsense-mediated decay YOL139C GO:0000027 0.0100233879051119 30/2993 5/74 0.000709223940144041 0.0432626603487865 ribosomal large subunit assembly and maintenance YDR418W YEL054C YGR085C YML073C YOR063W GO:0006364 0.0106916137654527 32/2993 4/74 0.00733098595738492 0.44719014340048 rRNA processing YDR365C YGL120C YLR002C YMR302C GO:0006413 0.00935516204477113 28/2993 3/74 0.0305199109240785 1 translational initiation YJL138C YOL139C YPR163C GO:0006412 0.0811894420314066 243/2993 35/74 6.18690549687215e-020 3.77401235309201e-018 translation YBL027W YBL092W YBR181C YBR191W YDR025W YDR064W YDR418W YDR450W YEL054C YER074W YER117W YER131W YGL076C YGR027C YGR085C YGR148C YHL033C YIL018W YJL189W YJR123W YKR094C YLL045C YLR185W YLR388W YML024W YML063W YML073C YMR121C YMR142C YMR143W YNL069C YNL178W YNL301C YOL040C YOR063W GO:0031118 0.00100233879051119 3/2993 1/74 NA NA rRNA pseudouridine synthesis YLR175W GO:0006487 0.0100233879051119 30/2993 1/74 NA NA protein amino acid N-linked glycosylation YMR149W GO:0006537 0.00400935516204477 12/2993 1/74 NA NA glutamate biosynthetic process YLR142W GO:0006121 0.00133645172068159 4/2993 1/74 NA NA mitochondrial electron transport, succinate to ubiquinone YKL148C GO:0000391 0.00100233879051119 3/2993 1/74 NA NA U2-dependent spliceosome disassembly YGL120C GO:0042254 0.0370865352489141 111/2993 11/74 6.49064940072805e-005 0.00395929613444411 ribosome biogenesis and assembly YBR034C YDR365C YGL099W YGL120C YGR123C YKR060W YKR094C YLR002C YLR175W YOR243C YPR110C GO:0005975 0.00367524223187437 11/2993 1/74 NA NA carbohydrate metabolic process YIL154C GO:0000074 0.00668225860340795 20/2993 1/74 NA NA regulation of progression through cell cycle YOL139C GO:0040031 0.000334112930170398 1/2993 1/74 NA NA snRNA modification YOR243C GO:0000054 0.00167056465085199 5/2993 1/74 NA NA ribosome export from nucleus YGL099W GO:0006365 0.0200467758102239 60/2993 5/74 0.0152931681974281 0.932883260043111 35S primary transcript processing YDR280W YGL120C YKR060W YLR175W YPL235W GO:0006402 0.00968927497494153 29/2993 1/74 NA NA mRNA catabolic process YDR280W GO:0010133 0.000668225860340795 2/2993 1/74 NA NA proline catabolic process to glutamate YLR142W GO:0007265 0.00367524223187437 11/2993 1/74 NA NA Ras protein signal transduction YJL164C GO:0030490 0.0106916137654527 32/2993 1/74 NA NA processing of 20S pre-rRNA YGL120C GO:0006879 0.00668225860340795 20/2993 1/74 NA NA iron ion homeostasis YMR301C GO:0006338 0.0106916137654527 32/2993 1/74 NA NA chromatin remodeling YPL235W GO:0006783 0.00267290344136318 8/2993 1/74 NA NA heme biosynthetic process YDR232W GO:0006613 0.000334112930170398 1/2993 1/74 NA NA cotranslational protein targeting to membrane YBR283C GO:0000105 0.00467758102238557 14/2993 1/74 NA NA histidine biosynthetic process YIL020C GO:0042493 0.021049114600735 63/2993 3/74 0.203015744906727 1 response to drug YDR293C YER117W YIL018W GO:0000056 0.00133645172068159 4/2993 1/74 NA NA ribosomal small subunit export from nucleus YOL040C GO:0006270 0.00835282325425994 25/2993 1/74 NA NA DNA replication initiation YLR002C GO:0006468 0.0304042766455062 91/2993 2/74 0.66567083435952 1 protein amino acid phosphorylation YBL009W YJL164C GO:0007047 0.021049114600735 63/2993 1/74 NA NA cell wall organization and biogenesis YDR293C GO:0006400 0.00634814567323755 19/2993 1/74 NA NA tRNA modification YOR243C GO:0000002 0.00701637153357835 21/2993 2/74 0.0936345603927078 1 mitochondrial genome maintenance YLR355C YMR302C GO:0045449 0.00200467758102239 6/2993 1/74 NA NA regulation of transcription YDR232W GO:0006406 0.0136986301369863 41/2993 1/74 NA NA mRNA export from nucleus YBR034C GO:0016567 0.00968927497494153 29/2993 1/74 NA NA protein ubiquitination YKR094C GO:0006414 0.00534580688272636 16/2993 2/74 0.0578732141554957 1 translational elongation YDR385W YKL081W GO:0006450 0.00334112930170398 10/2993 1/74 NA NA regulation of translational fidelity YDR025W GO:0001522 0.00100233879051119 3/2993 1/74 NA NA pseudouridine synthesis YOR243C GO:0009396 0.00133645172068159 4/2993 1/74 NA NA folic acid and derivative biosynthetic process YGR267C GO:0006099 0.00467758102238557 14/2993 1/74 NA NA tricarboxylic acid cycle YKL148C GO:0006357 0.0203808887403943 61/2993 1/74 NA NA regulation of transcription from RNA polymerase II promoter YPL235W GO:0000028 0.00367524223187437 11/2993 2/74 0.0287127796714797 1 ribosomal small subunit assembly and maintenance YDR025W YML024W GO:0015914 0.00167056465085199 5/2993 1/74 NA NA phospholipid transport YJL145W GO:0006470 0.00902104911460073 27/2993 1/74 NA NA protein amino acid dephosphorylation YGR123C GO:0016074 0.00100233879051119 3/2993 1/74 NA NA snoRNA metabolic process YPL235W GO:0006974 0.00768459739391914 23/2993 1/74 NA NA response to DNA damage stimulus YNL178W GO:0009083 0.000668225860340795 2/2993 1/74 NA NA branched chain family amino acid catabolic process YHR208W GO:0006281 0.0160374206481791 48/2993 1/74 NA NA DNA repair YIL154C GO:0006366 0.0140327430671567 42/2993 2/74 0.278562654303996 1 transcription from RNA polymerase II promoter YOR224C YPR187W GO:0006446 0.00300701637153358 9/2993 2/74 0.0194032348640811 1 regulation of translational initiation YJL138C YLR291C GO:0007126 0.0113598396257935 34/2993 1/74 NA NA meiosis YBL009W GO:0006888 0.0106916137654527 32/2993 1/74 NA NA ER to Golgi vesicle-mediated transport YER074W GO:0000723 0.0547945205479452 164/2993 6/74 0.217138868053827 1 telomere maintenance YBR283C YDR418W YDR450W YML024W YMR142C YMR143W GO:0006383 0.00701637153357835 21/2993 3/74 0.0140137637194762 0.85483958688805 transcription from RNA polymerase III promoter YOR224C YPR110C YPR187W Total number of genes: 2993 Total number of Study genes: 74 Total number of Study gene GMRG terms (pop non-singletons): 64 (61) Genes with GMRG information: 72 Genes with no GMRG information: 2 These are: YER056C-A YFR031C-A Bicluster # 19 GeneMerge v1.2; C:\AGO\AGB_FV_Sin_Traslape\GOAGB_FV_Sin_Traslapecluster19.txt Gene Association File: S_cerevisiae.BP Description File: GO.BP.use Population File: pop.txt Study File: C:\AGO\AGB_FV_Sin_Traslape\AGB_FV_Sin_Traslapecluster19.txt GMRG_Term Pop_freq Pop_frac Study_frac Raw_es e-score Description Contributing_genes GO:0000747 0.00467758102238557 14/2993 1/41 NA NA conjugation with cellular fusion YGL099W GO:0030437 0.0113598396257935 34/2993 1/41 NA NA sporulation (sensu Fungi) YGL099W GO:0006308 0.000334112930170398 1/2993 1/41 NA NA DNA catabolic process YJL208C GO:0006275 0.000668225860340795 2/2993 1/41 NA NA regulation of DNA replication YDR069C GO:0007035 0.00534580688272636 16/2993 1/41 NA NA vacuolar acidification YPL234C GO:0000154 0.00367524223187437 11/2993 1/41 NA NA rRNA modification YLL011W GO:0000055 0.00200467758102239 6/2993 1/41 NA NA ribosomal large subunit export from nucleus YHR170W GO:0000710 0.00233879051119278 7/2993 1/41 NA NA meiotic mismatch repair YDR097C GO:0017148 0.000668225860340795 2/2993 1/41 NA NA negative regulation of protein biosynthetic process YGL030W GO:0016579 0.00534580688272636 16/2993 1/41 NA NA protein deubiquitination YDR069C GO:0008315 0.000334112930170398 1/2993 1/41 NA NA meiotic G2/MI transition YGR108W GO:0030472 0.00668225860340795 20/2993 1/41 NA NA mitotic spindle organization and biogenesis in nucleus YGR108W GO:0015908 0.00100233879051119 3/2993 1/41 NA NA fatty acid transport YKL188C GO:0000398 0.0173738723688607 52/2993 1/41 NA NA nuclear mRNA splicing, via spliceosome YEL026W GO:0006468 0.0304042766455062 91/2993 1/41 NA NA protein amino acid phosphorylation YJL141C GO:0000027 0.0100233879051119 30/2993 2/41 0.0625681720990987 1 ribosomal large subunit assembly and maintenance YGR085C YHR170W GO:0000910 0.0113598396257935 34/2993 1/41 NA NA cytokinesis YCR057C GO:0006364 0.0106916137654527 32/2993 2/41 0.0701383141393638 1 rRNA processing YGL030W YPL043W GO:0006413 0.00935516204477113 28/2993 1/41 NA NA translational initiation YER025W GO:0006979 0.0126962913464751 38/2993 1/41 NA NA response to oxidative stress YKL026C GO:0006003 0.000668225860340795 2/2993 1/41 NA NA fructose 2,6-bisphosphate metabolic process YIL107C GO:0006508 0.00534580688272636 16/2993 1/41 NA NA proteolysis YLR244C GO:0006412 0.0811894420314066 243/2993 15/41 2.67710371727389e-007 1.28500978429147e-005 translation YER131W YGL030W YGR034W YGR085C YGR118W YGR214W YHR010W YIL148W YKL006W YKL156W YLR388W YMR230W YOR312C YOR369C YPL198W GO:0006400 0.00634814567323755 19/2993 1/41 NA NA tRNA modification YOR243C GO:0006310 0.00467758102238557 14/2993 1/41 NA NA DNA recombination YJL208C GO:0008150 0.0180420982292015 54/2993 1/41 NA NA biological_process YMR230W GO:0006406 0.0136986301369863 41/2993 1/41 NA NA mRNA export from nucleus YDR395W GO:0006396 0.00200467758102239 6/2993 1/41 NA NA RNA processing YFL001W GO:0030468 0.0140327430671567 42/2993 1/41 NA NA establishment of cell polarity (sensu Fungi) YCR057C GO:0016567 0.00968927497494153 29/2993 1/41 NA NA protein ubiquitination YIL148W GO:0001522 0.00100233879051119 3/2993 1/41 NA NA pseudouridine synthesis YOR243C GO:0006110 0.000668225860340795 2/2993 1/41 NA NA regulation of glycolysis YIL107C GO:0006450 0.00334112930170398 10/2993 1/41 NA NA regulation of translational fidelity YGR118W GO:0051083 0.00167056465085199 5/2993 1/41 NA NA cotranslational protein folding YHR193C GO:0000028 0.00367524223187437 11/2993 1/41 NA NA ribosomal small subunit assembly and maintenance YGR214W GO:0008277 0.000334112930170398 1/2993 1/41 NA NA regulation of G-protein coupled receptor protein signaling pathway YDR085C GO:0042254 0.0370865352489141 111/2993 13/41 9.16121922784607e-010 4.39738522936611e-008 ribosome biogenesis and assembly YCR057C YEL026W YGL099W YGR123C YHR170W YHR196W YIL148W YJL208C YLR409C YMR239C YOR243C YOR312C YPL043W GO:0006511 0.0170397594386903 51/2993 1/41 NA NA ubiquitin-dependent protein catabolic process YDR069C GO:0006897 0.0183762111593719 55/2993 1/41 NA NA endocytosis YDR069C GO:0006470 0.00902104911460073 27/2993 1/41 NA NA protein amino acid dephosphorylation YGR123C GO:0006401 0.00133645172068159 4/2993 1/41 NA NA RNA catabolic process YJL208C GO:0000767 0.000668225860340795 2/2993 1/41 NA NA cellular morphogenesis during conjugation YDR085C GO:0040031 0.000334112930170398 1/2993 1/41 NA NA snRNA modification YOR243C GO:0006298 0.00567991981289676 17/2993 1/41 NA NA mismatch repair YDR097C GO:0000054 0.00167056465085199 5/2993 1/41 NA NA ribosome export from nucleus YGL099W GO:0006365 0.0200467758102239 60/2993 4/41 0.0084972603832813 0.407868498397503 35S primary transcript processing YCR057C YLL011W YLR409C YMR239C GO:0006913 0.00233879051119278 7/2993 1/41 NA NA nucleocytoplasmic transport YDR395W GO:0000086 0.00735048446374875 22/2993 1/41 NA NA G2/M transition of mitotic cell cycle YGR108W GO:0048025 0.000334112930170398 1/2993 1/41 NA NA negative regulation of nuclear mRNA splicing, via spliceosome YGL030W GO:0030490 0.0106916137654527 32/2993 4/41 0.000826379935325983 0.0396662368956472 processing of 20S pre-rRNA YCR057C YEL026W YHR196W YLL011W GO:0000750 0.00801871032408954 24/2993 1/41 NA NA pheromone-dependent signal transduction during conjugation with cellular fusion YDR085C GO:0000079 0.00467758102238557 14/2993 1/41 NA NA regulation of cyclin-dependent protein kinase activity YGR108W GO:0000723 0.0547945205479452 164/2993 2/41 0.666970991218686 1 telomere maintenance YDR069C YGR118W Total number of genes: 2993 Total number of Study genes: 41 Total number of Study gene GMRG terms (pop non-singletons): 53 (48) Genes with GMRG information: 41 Genes with no GMRG information: These are: Bicluster # 20 GeneMerge v1.2; C:\AGO\AGB_FV_Sin_Traslape\GOAGB_FV_Sin_Traslapecluster20.txt Gene Association File: S_cerevisiae.BP Description File: GO.BP.use Population File: pop.txt Study File: C:\AGO\AGB_FV_Sin_Traslape\AGB_FV_Sin_Traslapecluster20.txt GMRG_Term Pop_freq Pop_frac Study_frac Raw_es e-score Description Contributing_genes GO:0030437 0.0113598396257935 34/2993 1/77 NA NA sporulation (sensu Fungi) YIR026C GO:0006426 0.000668225860340795 2/2993 2/77 0.000653485584009726 0.0561997602248364 glycyl-tRNA aminoacylation YBR121C YPR081C GO:0006308 0.000334112930170398 1/2993 1/77 NA NA DNA catabolic process YJL208C GO:0006360 0.00801871032408954 24/2993 3/77 0.0224700246132251 1 transcription from RNA polymerase I promoter YJL148W YNL248C YPR110C GO:0000162 0.00334112930170398 10/2993 1/77 NA NA tryptophan biosynthetic process YKL181W GO:0006672 0.000668225860340795 2/2993 1/77 NA NA ceramide metabolic process YPL087W GO:0000055 0.00200467758102239 6/2993 1/77 NA NA ribosomal large subunit export from nucleus YHR170W GO:0030004 0.00100233879051119 3/2993 1/77 NA NA monovalent inorganic cation homeostasis YOR054C GO:0007131 0.00567991981289676 17/2993 1/77 NA NA meiotic recombination YHL024W GO:0006423 0.000334112930170398 1/2993 1/77 NA NA cysteinyl-tRNA aminoacylation YNL247W GO:0006623 0.00668225860340795 20/2993 1/77 NA NA protein targeting to vacuole YBL078C GO:0006914 0.00267290344136318 8/2993 1/77 NA NA autophagy YBL078C GO:0009749 0.00167056465085199 5/2993 1/77 NA NA response to glucose stimulus YNL154C GO:0000096 0.00200467758102239 6/2993 1/77 NA NA sulfur amino acid metabolic process YPL273W GO:0042273 0.00200467758102239 6/2993 1/77 NA NA ribosomal large subunit biogenesis and assembly YFR001W GO:0006353 0.000668225860340795 2/2993 1/77 NA NA transcription termination YBR121C GO:0016075 0.00100233879051119 3/2993 1/77 NA NA rRNA catabolic process YJL050W GO:0042989 0.000334112930170398 1/2993 1/77 NA NA sequestering of actin monomers YGR080W GO:0030148 0.00501169395255596 15/2993 1/77 NA NA sphingolipid biosynthetic process YLR372W GO:0000027 0.0100233879051119 30/2993 5/77 0.000851724278709813 0.0732482879690439 ribosomal large subunit assembly and maintenance YDR418W YGL078C YHR170W YLR448W YML073C GO:0006364 0.0106916137654527 32/2993 2/77 0.198324937459541 1 rRNA processing YDR083W YLR002C GO:0042144 0.00434346809221517 13/2993 1/77 NA NA vacuole fusion, non-autophagic YHR138C GO:0009408 0.00534580688272636 16/2993 1/77 NA NA response to heat YPL087W GO:0006413 0.00935516204477113 28/2993 1/77 NA NA translational initiation YGR162W GO:0006817 0.00300701637153358 9/2993 1/77 NA NA phosphate transport YER053C GO:0006098 0.00200467758102239 6/2993 1/77 NA NA pentose-phosphate shunt YOR095C GO:0006534 0.000668225860340795 2/2993 1/77 NA NA cysteine metabolic process YNL247W GO:0030497 0.00100233879051119 3/2993 1/77 NA NA fatty acid elongation YLR372W GO:0001302 0.00701637153357835 21/2993 1/77 NA NA replicative cell aging YKL113C GO:0006412 0.0811894420314066 243/2993 30/77 2.41311512712799e-014 2.07527900933007e-012 translation YBL027W YBR189W YDL184C YDR418W YDR500C YER074W YER102W YER131W YGR148C YHR203C YIL018W YJL177W YKL180W YLL045C YLR185W YLR388W YLR448W YML026C YML063W YML073C YMR242C YNL067W YNL069C YNL096C YNL162W YNL178W YOR234C YOR293W YOR312C YPL079W GO:0031118 0.00100233879051119 3/2993 1/77 NA NA rRNA pseudouridine synthesis YLR175W GO:0006310 0.00467758102238557 14/2993 1/77 NA NA DNA recombination YJL208C GO:0008150 0.0180420982292015 54/2993 3/77 0.160550146003121 1 biological_process YER053C YNL067W YNL162W GO:0006279 0.00133645172068159 4/2993 1/77 NA NA premeiotic DNA synthesis YHL024W GO:0042254 0.0370865352489141 111/2993 21/77 9.76756928236701e-014 8.40010958283563e-012 ribosome biogenesis and assembly YDR083W YGR162W YHR170W YIR026C YJL050W YJL109C YJL125C YJL148W YJL208C YKR056W YKR060W YLR002C YLR175W YLR249W YNL247W YNL248C YNR003C YOR056C YOR095C YOR312C YPR110C GO:0008154 0.00167056465085199 5/2993 1/77 NA NA actin polymerization and/or depolymerization YGR080W GO:0008277 0.000334112930170398 1/2993 1/77 NA NA regulation of G-protein coupled receptor protein signaling pathway YDR085C GO:0043634 0.00133645172068159 4/2993 1/77 NA NA polyadenylation-dependent ncRNA catabolic process YJL050W GO:0006633 0.00167056465085199 5/2993 1/77 NA NA fatty acid biosynthetic process YLR372W GO:0006401 0.00133645172068159 4/2993 1/77 NA NA RNA catabolic process YJL208C GO:0000902 0.00367524223187437 11/2993 1/77 NA NA cell morphogenesis YNL154C GO:0007121 0.00902104911460073 27/2993 1/77 NA NA bipolar bud site selection YGR080W GO:0006810 0.0147009689274975 44/2993 1/77 NA NA transport YLR083C GO:0008298 0.00300701637153358 9/2993 1/77 NA NA intracellular mRNA localization YFR001W GO:0006365 0.0200467758102239 60/2993 4/77 0.066798972058866 1 35S primary transcript processing YGL078C YJL050W YKR060W YLR175W GO:0030488 0.00367524223187437 11/2993 1/77 NA NA tRNA methylation YJL125C GO:0006303 0.00567991981289676 17/2993 1/77 NA NA double-strand break repair via nonhomologous end joining YKL113C GO:0030490 0.0106916137654527 32/2993 2/77 0.198324937459541 1 processing of 20S pre-rRNA YJL109C YOR056C GO:0006879 0.00668225860340795 20/2993 1/77 NA NA iron ion homeostasis YLR205C GO:0043248 0.00133645172068159 4/2993 1/77 NA NA proteasome assembly YOR056C GO:0006260 0.00634814567323755 19/2993 1/77 NA NA DNA replication YKL113C GO:0042167 0.000334112930170398 1/2993 1/77 NA NA heme catabolic process YLR205C GO:0007015 0.0163715335783495 49/2993 1/77 NA NA actin filament organization YNL293W GO:0000731 0.00133645172068159 4/2993 1/77 NA NA DNA synthesis during DNA repair YKL113C GO:0000105 0.00467758102238557 14/2993 1/77 NA NA histidine biosynthetic process YKL181W GO:0043630 0.00100233879051119 3/2993 1/77 NA NA ncRNA polyadenylation during polyadenylation-dependent ncRNA catabolic process YJL050W GO:0042493 0.021049114600735 63/2993 1/77 NA NA response to drug YIL018W GO:0008361 0.00634814567323755 19/2993 1/77 NA NA regulation of cell size YNL248C GO:0006468 0.0304042766455062 91/2993 2/77 0.687069065334253 1 protein amino acid phosphorylation YLL019C YNL154C GO:0016078 0.000668225860340795 2/2993 1/77 NA NA tRNA catabolic process YJL050W GO:0000910 0.0113598396257935 34/2993 1/77 NA NA cytokinesis YNL154C GO:0006270 0.00835282325425994 25/2993 1/77 NA NA DNA replication initiation YLR002C GO:0015937 0.00233879051119278 7/2993 1/77 NA NA coenzyme A biosynthetic process YOR054C GO:0000082 0.0103575008352823 31/2993 1/77 NA NA G1/S transition of mitotic cell cycle YOR054C GO:0006400 0.00634814567323755 19/2993 1/77 NA NA tRNA modification YKR056W GO:0006207 0.00167056465085199 5/2993 1/77 NA NA 'de novo' pyrimidine base biosynthetic process YKL181W GO:0016575 0.00634814567323755 19/2993 1/77 NA NA histone deacetylation YMR053C GO:0006406 0.0136986301369863 41/2993 1/77 NA NA mRNA export from nucleus YJL050W GO:0006501 0.000668225860340795 2/2993 1/77 NA NA C-terminal protein lipidation YBL078C GO:0008615 0.000334112930170398 1/2993 1/77 NA NA pyridoxine biosynthetic process YOR095C GO:0006166 0.00167056465085199 5/2993 1/77 NA NA purine ribonucleoside salvage YKL181W GO:0006950 0.0180420982292015 54/2993 1/77 NA NA response to stress YIL101C GO:0006414 0.00534580688272636 16/2993 1/77 NA NA translational elongation YLR249W GO:0042274 0.00233879051119278 7/2993 1/77 NA NA ribosomal small subunit biogenesis and assembly YOR056C GO:0007050 0.00100233879051119 3/2993 1/77 NA NA cell cycle arrest YJL157C GO:0006450 0.00334112930170398 10/2993 1/77 NA NA regulation of translational fidelity YBR189W GO:0009396 0.00133645172068159 4/2993 1/77 NA NA folic acid and derivative biosynthetic process YNL256W GO:0005977 0.00400935516204477 12/2993 1/77 NA NA glycogen metabolic process YIR026C GO:0009073 0.00167056465085199 5/2993 1/77 NA NA aromatic amino acid family biosynthetic process YBR249C GO:0006897 0.0183762111593719 55/2993 1/77 NA NA endocytosis YNL154C GO:0006974 0.00768459739391914 23/2993 1/77 NA NA response to DNA damage stimulus YNL178W GO:0030435 0.00200467758102239 6/2993 1/77 NA NA sporulation YHL024W GO:0000767 0.000668225860340795 2/2993 1/77 NA NA cellular morphogenesis during conjugation YDR085C GO:0006281 0.0160374206481791 48/2993 2/77 0.351643651593776 1 DNA repair YKL113C YKR056W GO:0006189 0.00200467758102239 6/2993 1/77 NA NA 'de novo' IMP biosynthetic process YKL181W GO:0007126 0.0113598396257935 34/2993 2/77 0.217330560471931 1 meiosis YHL024W YIR026C GO:0006892 0.00100233879051119 3/2993 1/77 NA NA post-Golgi vesicle-mediated transport YLR372W GO:0006888 0.0106916137654527 32/2993 1/77 NA NA ER to Golgi vesicle-mediated transport YER074W GO:0000750 0.00801871032408954 24/2993 2/77 0.125423862551279 1 pheromone-dependent signal transduction during conjugation with cellular fusion YDR085C YJL157C GO:0006383 0.00701637153357835 21/2993 3/77 0.015601314744216 1 transcription from RNA polymerase III promoter YDL150W YNR003C YPR110C GO:0006887 0.00601403274306716 18/2993 1/77 NA NA exocytosis YNL293W GO:0000723 0.0547945205479452 164/2993 5/77 0.415488957207159 1 telomere maintenance YDR083W YDR418W YHR203C YKL113C YLR372W Total number of genes: 2993 Total number of Study genes: 77 Total number of Study gene GMRG terms (pop non-singletons): 92 (86) Genes with GMRG information: 77 Genes with no GMRG information: These are: Bicluster # 21 GeneMerge v1.2; C:\AGO\AGB_FV_Sin_Traslape\GOAGB_FV_Sin_Traslapecluster21.txt Gene Association File: S_cerevisiae.BP Description File: GO.BP.use Population File: pop.txt Study File: C:\AGO\AGB_FV_Sin_Traslape\AGB_FV_Sin_Traslapecluster21.txt GMRG_Term Pop_freq Pop_frac Study_frac Raw_es e-score Description Contributing_genes GO:0007124 0.0167056465085199 50/2993 1/60 NA NA pseudohyphal growth YJL164C GO:0030489 0.00233879051119278 7/2993 2/60 0.00777997896122965 0.45123877975132 processing of 27S pre-rRNA YGL120C YNL163C GO:0000747 0.00467758102238557 14/2993 2/60 0.030810065404812 1 conjugation with cellular fusion YGL099W YHR066W GO:0030437 0.0113598396257935 34/2993 1/60 NA NA sporulation (sensu Fungi) YGL099W GO:0006096 0.00534580688272636 16/2993 2/60 0.0396034201242521 1 glycolysis YCL040W YFR053C GO:0006360 0.00801871032408954 24/2993 4/60 0.00114925553784981 0.0666568211952891 transcription from RNA polymerase I promoter YJL148W YML043C YNL248C YPR010C GO:0000162 0.00334112930170398 10/2993 1/60 NA NA tryptophan biosynthetic process YHL011C GO:0018216 0.000334112930170398 1/2993 1/60 NA NA peptidyl-arginine methylation YDR465C GO:0009082 0.00233879051119278 7/2993 2/60 0.00777997896122965 0.45123877975132 branched chain family amino acid biosynthetic process YER086W YJR016C GO:0008654 0.00434346809221517 13/2993 1/60 NA NA phospholipid biosynthetic process YBL039C GO:0000154 0.00367524223187437 11/2993 3/60 0.00112751380364217 0.0653958006112457 rRNA modification YLL011W YNL075W YPL266W GO:0000055 0.00200467758102239 6/2993 1/60 NA NA ribosomal large subunit export from nucleus YHR170W GO:0001403 0.0100233879051119 30/2993 1/60 NA NA invasive growth (sensu Saccharomyces) YGL208W GO:0006013 0.00133645172068159 4/2993 2/60 0.00231095801101597 0.134035564638926 mannose metabolic process YCL040W YFR053C GO:0019568 0.00133645172068159 4/2993 1/60 NA NA arabinose catabolic process YJR096W GO:0006421 0.000334112930170398 1/2993 1/60 NA NA asparaginyl-tRNA aminoacylation YHR019C GO:0006824 0.000668225860340795 2/2993 1/60 NA NA cobalt ion transport YMR243C GO:0000105 0.00467758102238557 14/2993 1/60 NA NA histidine biosynthetic process YHL011C GO:0042273 0.00200467758102239 6/2993 2/60 0.00562949744702943 0.326510851927707 ribosomal large subunit biogenesis and assembly YGL120C YNL163C GO:0006006 0.00467758102238557 14/2993 2/60 0.030810065404812 1 glucose metabolic process YCL040W YFR053C GO:0007165 0.00935516204477113 28/2993 1/60 NA NA signal transduction YGL208W GO:0006241 0.000668225860340795 2/2993 1/60 NA NA CTP biosynthetic process YBL039C GO:0008361 0.00634814567323755 19/2993 3/60 0.00590673673126234 0.342590730413216 regulation of cell size YHL011C YHR066W YNL248C GO:0006468 0.0304042766455062 91/2993 2/60 0.550493593117075 1 protein amino acid phosphorylation YGL208W YJL164C GO:0000027 0.0100233879051119 30/2993 5/60 0.000265317122088805 0.0153883930811507 ribosomal large subunit assembly and maintenance YFL002C YHR066W YHR170W YLL008W YLR276C GO:0006364 0.0106916137654527 32/2993 3/60 0.0251505102572555 1 rRNA processing YGL120C YMR229C YNL061W GO:0000290 0.00233879051119278 7/2993 1/60 NA NA deadenylation-dependent decapping YLR270W GO:0019856 0.000668225860340795 2/2993 1/60 NA NA pyrimidine base biosynthetic process YBL039C GO:0006413 0.00935516204477113 28/2993 2/60 0.107189889345836 1 translational initiation YER025W YMR309C GO:0006749 0.00133645172068159 4/2993 2/60 0.00231095801101597 0.134035564638926 glutathione metabolic process YIR038C YMR243C GO:0005978 0.00200467758102239 6/2993 1/60 NA NA glycogen biosynthetic process YLR258W GO:0046323 0.00100233879051119 3/2993 2/60 0.00117059101856803 0.0678942790769458 glucose import YCL040W YFR053C GO:0001302 0.00701637153357835 21/2993 1/60 NA NA replicative cell aging YGL208W GO:0006412 0.0811894420314066 243/2993 5/60 0.544813281655851 1 translation YBR181C YER102W YKL142W YKL156W YPL220W GO:0031118 0.00100233879051119 3/2993 1/60 NA NA rRNA pseudouridine synthesis YLR175W GO:0006487 0.0100233879051119 30/2993 1/60 NA NA protein amino acid N-linked glycosylation YPL050C GO:0006400 0.00634814567323755 19/2993 1/60 NA NA tRNA modification YOR243C GO:0006207 0.00167056465085199 5/2993 1/60 NA NA 'de novo' pyrimidine base biosynthetic process YHL011C GO:0005998 0.000334112930170398 1/2993 1/60 NA NA xylulose catabolic process YGR194C GO:0032445 0.000668225860340795 2/2993 1/60 NA NA fructose import YFR053C GO:0006166 0.00167056465085199 5/2993 1/60 NA NA purine ribonucleoside salvage YHL011C GO:0006950 0.0180420982292015 54/2993 1/60 NA NA response to stress YIL101C GO:0006414 0.00534580688272636 16/2993 1/60 NA NA translational elongation YLR249W GO:0042843 0.00133645172068159 4/2993 1/60 NA NA D-xylose catabolic process YJR096W GO:0001522 0.00100233879051119 3/2993 1/60 NA NA pseudouridine synthesis YOR243C GO:0042149 0.00133645172068159 4/2993 1/60 NA NA cellular response to glucose starvation YGL208W GO:0006829 0.00100233879051119 3/2993 1/60 NA NA zinc ion transport YMR243C GO:0006530 0.00167056465085199 5/2993 1/60 NA NA asparagine catabolic process YDR321W GO:0009396 0.00133645172068159 4/2993 1/60 NA NA folic acid and derivative biosynthetic process YNL256W GO:0000391 0.00100233879051119 3/2993 1/60 NA NA U2-dependent spliceosome disassembly YGL120C GO:0042254 0.0370865352489141 111/2993 29/60 3.26015610836607e-027 1.89089054285232e-025 ribosome biogenesis and assembly YDL201W YDR120C YDR398W YDR465C YFL002C YGL099W YGL120C YGR128C YHL011C YHR170W YJL033W YJL148W YKL078W YKR060W YLL008W YLR175W YLR249W YLR276C YLR409C YMR093W YMR128W YMR229C YMR309C YNL061W YNL075W YNL248C YOR243C YPL266W YPR010C GO:0040031 0.000334112930170398 1/2993 1/60 NA NA snRNA modification YOR243C GO:0007569 0.000668225860340795 2/2993 1/60 NA NA cell aging YGL208W GO:0000054 0.00167056465085199 5/2993 1/60 NA NA ribosome export from nucleus YGL099W GO:0006000 0.00100233879051119 3/2993 1/60 NA NA fructose metabolic process YFR053C GO:0006365 0.0200467758102239 60/2993 13/60 5.49401607632287e-011 3.18652932426726e-009 35S primary transcript processing YFL002C YGL120C YGL171W YJL033W YKR060W YLL008W YLL011W YLR175W YLR276C YLR409C YMR229C YNL075W YPL266W GO:0006882 0.00200467758102239 6/2993 1/60 NA NA zinc ion homeostasis YMR243C GO:0030488 0.00367524223187437 11/2993 2/60 0.0193519847126322 1 tRNA methylation YDL201W YDR120C GO:0006189 0.00200467758102239 6/2993 1/60 NA NA 'de novo' IMP biosynthetic process YHL011C GO:0006427 0.000334112930170398 1/2993 1/60 NA NA histidyl-tRNA aminoacylation YPR033C GO:0007265 0.00367524223187437 11/2993 1/60 NA NA Ras protein signal transduction YJL164C GO:0030490 0.0106916137654527 32/2993 8/60 1.16905411440846e-007 6.78051386356906e-006 processing of 20S pre-rRNA YDR398W YGL120C YGR128C YLL011W YMR093W YMR128W YMR229C YNL075W GO:0000723 0.0547945205479452 164/2993 1/60 NA NA telomere maintenance YHL011C Total number of genes: 2993 Total number of Study genes: 60 Total number of Study gene GMRG terms (pop non-singletons): 63 (58) Genes with GMRG information: 59 Genes with no GMRG information: 1 These are: YJR094W-A Bicluster # 22 GeneMerge v1.2; C:\AGO\AGB_FV_Sin_Traslape\GOAGB_FV_Sin_Traslapecluster22.txt Gene Association File: S_cerevisiae.BP Description File: GO.BP.use Population File: pop.txt Study File: C:\AGO\AGB_FV_Sin_Traslape\AGB_FV_Sin_Traslapecluster22.txt GMRG_Term Pop_freq Pop_frac Study_frac Raw_es e-score Description Contributing_genes GO:0030489 0.00233879051119278 7/2993 1/36 NA NA processing of 27S pre-rRNA YHR088W GO:0000747 0.00467758102238557 14/2993 1/36 NA NA conjugation with cellular fusion YHR066W GO:0006607 0.00768459739391914 23/2993 1/36 NA NA NLS-bearing substrate import into nucleus YKL068W GO:0006408 0.00768459739391914 23/2993 1/36 NA NA snRNA export from nucleus YKL068W GO:0006360 0.00801871032408954 24/2993 1/36 NA NA transcription from RNA polymerase I promoter YER148W GO:0006289 0.00668225860340795 20/2993 1/36 NA NA nucleotide-excision repair YIL128W GO:0000154 0.00367524223187437 11/2993 1/36 NA NA rRNA modification YNL075W GO:0006609 0.00768459739391914 23/2993 1/36 NA NA mRNA-binding (hnRNP) protein import into nucleus YKL068W GO:0016579 0.00534580688272636 16/2993 1/36 NA NA protein deubiquitination YER098W GO:0006457 0.00868693618443034 26/2993 1/36 NA NA protein folding YJL014W GO:0042493 0.021049114600735 63/2993 1/36 NA NA response to drug YER117W GO:0000398 0.0173738723688607 52/2993 1/36 NA NA nuclear mRNA splicing, via spliceosome YEL026W GO:0006499 0.00133645172068159 4/2993 1/36 NA NA N-terminal protein myristoylation YIL009W GO:0008361 0.00634814567323755 19/2993 1/36 NA NA regulation of cell size YHR066W GO:0000027 0.0100233879051119 30/2993 3/36 0.00519290076237658 0.22848763354457 ribosomal large subunit assembly and maintenance YHR066W YHR088W YLR340W GO:0006364 0.0106916137654527 32/2993 1/36 NA NA rRNA processing YER006W GO:0006413 0.00935516204477113 28/2993 1/36 NA NA translational initiation YJR007W GO:0006555 0.00467758102238557 14/2993 1/36 NA NA methionine metabolic process YIL128W GO:0007010 0.00467758102238557 14/2993 1/36 NA NA cytoskeleton organization and biogenesis YJL014W GO:0006412 0.0811894420314066 243/2993 17/36 3.56764935232974e-010 1.56976571502509e-008 translation YDL075W YDR025W YDR064W YDR450W YDR471W YDR500C YER117W YGL123W YGR034W YGR148C YHR010W YIL052C YJL189W YKR057W YLR340W YLR388W YPL090C GO:0006431 0.00100233879051119 3/2993 1/36 NA NA methionyl-tRNA aminoacylation YGR264C GO:0006545 0.000668225860340795 2/2993 1/36 NA NA glycine biosynthetic process YEL046C GO:0005998 0.000334112930170398 1/2993 1/36 NA NA xylulose catabolic process YGR194C GO:0006367 0.0147009689274975 44/2993 1/36 NA NA transcription initiation from RNA polymerase II promoter YER148W GO:0008150 0.0180420982292015 54/2993 1/36 NA NA biological_process YKL068W GO:0006567 0.00100233879051119 3/2993 1/36 NA NA threonine catabolic process YEL046C GO:0006629 0.00367524223187437 11/2993 1/36 NA NA lipid metabolic process YIL009W GO:0006406 0.0136986301369863 41/2993 1/36 NA NA mRNA export from nucleus YKL068W GO:0006999 0.00835282325425994 25/2993 1/36 NA NA nuclear pore organization and biogenesis YKL068W GO:0006414 0.00534580688272636 16/2993 1/36 NA NA translational elongation YLR340W GO:0042274 0.00233879051119278 7/2993 1/36 NA NA ribosomal small subunit biogenesis and assembly YPR144C GO:0006450 0.00334112930170398 10/2993 2/36 0.00595868858742523 0.26218229784671 regulation of translational fidelity YDR025W YGL123W GO:0000028 0.00367524223187437 11/2993 1/36 NA NA ribosomal small subunit assembly and maintenance YDR025W GO:0042254 0.0370865352489141 111/2993 8/36 3.5347399361879e-005 0.00155528557192268 ribosome biogenesis and assembly YEL026W YER006W YHR088W YHR169W YMR239C YNL075W YPR144C YPR190C GO:0006610 0.00768459739391914 23/2993 1/36 NA NA ribosomal protein import into nucleus YKL068W GO:0006611 0.00935516204477113 28/2993 1/36 NA NA protein export from nucleus YKL068W GO:0006407 0.00868693618443034 26/2993 1/36 NA NA rRNA export from nucleus YKL068W GO:0006365 0.0200467758102239 60/2993 4/36 0.00532462431249357 0.234283469749717 35S primary transcript processing YHR169W YMR239C YNL075W YPR144C GO:0006409 0.00902104911460073 27/2993 1/36 NA NA tRNA export from nucleus YKL068W GO:0006608 0.00768459739391914 23/2993 1/36 NA NA snRNP protein import into nucleus YKL068W GO:0006366 0.0140327430671567 42/2993 2/36 0.0897549816924154 1 transcription from RNA polymerase II promoter YER148W YIL128W GO:0006384 0.00367524223187437 11/2993 1/36 NA NA transcription initiation from RNA polymerase III promoter YER148W GO:0030490 0.0106916137654527 32/2993 2/36 0.0556828082873997 1 processing of 20S pre-rRNA YEL026W YNL075W GO:0006383 0.00701637153357835 21/2993 2/36 0.0255951622664778 1 transcription from RNA polymerase III promoter YER148W YPR190C GO:0000723 0.0547945205479452 164/2993 4/36 0.131531706220673 1 telomere maintenance YDR450W YIL052C YIL128W YKR057W Total number of genes: 2993 Total number of Study genes: 36 Total number of Study gene GMRG terms (pop non-singletons): 45 (44) Genes with GMRG information: 36 Genes with no GMRG information: These are: Bicluster # 23 GeneMerge v1.2; C:\AGO\AGB_FV_Sin_Traslape\GOAGB_FV_Sin_Traslapecluster23.txt Gene Association File: S_cerevisiae.BP Description File: GO.BP.use Population File: pop.txt Study File: C:\AGO\AGB_FV_Sin_Traslape\AGB_FV_Sin_Traslapecluster23.txt GMRG_Term Pop_freq Pop_frac Study_frac Raw_es e-score Description Contributing_genes GO:0007124 0.0167056465085199 50/2993 3/58 0.0712976157369732 1 pseudohyphal growth YHR084W YIL131C YOR032C GO:0030489 0.00233879051119278 7/2993 3/58 0.000228857760957838 0.0221992028129103 processing of 27S pre-rRNA YGL120C YHR088W YNL163C GO:0000747 0.00467758102238557 14/2993 2/58 0.0289271535171693 1 conjugation with cellular fusion YHR066W YHR084W GO:0006360 0.00801871032408954 24/2993 2/58 0.0776014871299642 1 transcription from RNA polymerase I promoter YJL148W YNL113W GO:0000162 0.00334112930170398 10/2993 1/58 NA NA tryptophan biosynthetic process YBL068W GO:0006289 0.00668225860340795 20/2993 2/58 0.0560973369228016 1 nucleotide-excision repair YJR006W YJR043C GO:0009082 0.00233879051119278 7/2993 1/58 NA NA branched chain family amino acid biosynthetic process YHR208W GO:0001403 0.0100233879051119 30/2993 1/58 NA NA invasive growth (sensu Saccharomyces) YHR084W GO:0019568 0.00133645172068159 4/2993 1/58 NA NA arabinose catabolic process YJR096W GO:0019740 0.00267290344136318 8/2993 1/58 NA NA nitrogen utilization YCR010C GO:0042273 0.00200467758102239 6/2993 2/58 0.00526683884572363 0.510883368035192 ribosomal large subunit biogenesis and assembly YGL120C YNL163C GO:0007103 0.00334112930170398 10/2993 1/58 NA NA spindle pole body duplication in nuclear envelope YNL188W GO:0006122 0.00233879051119278 7/2993 1/58 NA NA mitochondrial electron transport, ubiquinol to cytochrome c YJL166W GO:0006085 0.000668225860340795 2/2993 1/58 NA NA acetyl-CoA biosynthetic process YLR153C GO:0030447 0.00434346809221517 13/2993 2/58 0.0251033560345087 1 filamentous growth YBR171W YMR307W GO:0030148 0.00501169395255596 15/2993 1/58 NA NA sphingolipid biosynthetic process YLR372W GO:0030433 0.00567991981289676 17/2993 1/58 NA NA ER-associated protein catabolic process YNR026C GO:0000027 0.0100233879051119 30/2993 3/58 0.0193520505080363 1 ribosomal large subunit assembly and maintenance YHR066W YHR088W YLR276C GO:0006364 0.0106916137654527 32/2993 1/58 NA NA rRNA processing YGL120C GO:0006348 0.0133645172068159 40/2993 1/58 NA NA chromatin silencing at telomere YJL080C GO:0019933 0.00100233879051119 3/2993 1/58 NA NA cAMP-mediated signaling YOR360C GO:0000084 0.00133645172068159 4/2993 1/58 NA NA S phase of mitotic cell cycle YLR210W GO:0030497 0.00100233879051119 3/2993 1/58 NA NA fatty acid elongation YLR372W GO:0045944 0.0160374206481791 48/2993 1/58 NA NA positive regulation of transcription from RNA polymerase II promoter YKL112W GO:0006412 0.0811894420314066 243/2993 11/58 0.00591544003223252 0.573797683126555 translation YER074W YGL076C YGR118W YIL018W YIL148W YKL180W YLR367W YML063W YNL162W YNL178W YPL220W GO:0006487 0.0100233879051119 30/2993 1/58 NA NA protein amino acid N-linked glycosylation YJL002C GO:0000742 0.00267290344136318 8/2993 1/58 NA NA karyogamy during conjugation with cellular fusion YNL188W GO:0008150 0.0180420982292015 54/2993 1/58 NA NA biological_process YNL162W GO:0006333 0.00668225860340795 20/2993 1/58 NA NA chromatin assembly or disassembly YNL030W GO:0007059 0.00902104911460073 27/2993 1/58 NA NA chromosome segregation YJL080C GO:0015696 0.00200467758102239 6/2993 1/58 NA NA ammonium transport YCR010C GO:0006846 0.000334112930170398 1/2993 1/58 NA NA acetate transport YCR010C GO:0000122 0.0113598396257935 34/2993 1/58 NA NA negative regulation of transcription from RNA polymerase II promoter YKL112W GO:0007535 0.00167056465085199 5/2993 1/58 NA NA donor selection YIL131C GO:0045141 0.000668225860340795 2/2993 1/58 NA NA telomere clustering YJL080C GO:0000391 0.00100233879051119 3/2993 1/58 NA NA U2-dependent spliceosome disassembly YGL120C GO:0042254 0.0370865352489141 111/2993 9/58 0.000222189182159441 0.0215523506694658 ribosome biogenesis and assembly YBL068W YDR398W YGL120C YHR088W YIL148W YJL148W YLR276C YLR409C YNL113W GO:0006511 0.0170397594386903 51/2993 1/58 NA NA ubiquitin-dependent protein catabolic process YOR157C GO:0005975 0.00367524223187437 11/2993 1/58 NA NA carbohydrate metabolic process YGL156W GO:0006633 0.00167056465085199 5/2993 1/58 NA NA fatty acid biosynthetic process YLR372W GO:0006272 0.00434346809221517 13/2993 2/58 0.0251033560345087 1 leading strand elongation YJR006W YJR043C GO:0006810 0.0147009689274975 44/2993 1/58 NA NA transport YLR083C GO:0030466 0.00768459739391914 23/2993 3/58 0.0092887400335622 0.901007783255534 chromatin silencing at silent mating-type cassette YIL131C YJL080C YKL112W GO:0008298 0.00300701637153358 9/2993 1/58 NA NA intracellular mRNA localization YJL080C GO:0000715 0.00233879051119278 7/2993 1/58 NA NA nucleotide-excision repair, DNA damage recognition YKL112W GO:0006298 0.00567991981289676 17/2993 2/58 0.0416610851271226 1 mismatch repair YJR006W YJR043C GO:0006529 0.000668225860340795 2/2993 1/58 NA NA asparagine biosynthetic process YGR124W GO:0006365 0.0200467758102239 60/2993 3/58 0.108936885346564 1 35S primary transcript processing YGL120C YLR276C YLR409C GO:0016573 0.00835282325425994 25/2993 1/58 NA NA histone acetylation YLR153C GO:0008645 0.00534580688272636 16/2993 1/58 NA NA hexose transport YHR096C GO:0006566 0.00167056465085199 5/2993 1/58 NA NA threonine metabolic process YCR053W GO:0006273 0.00534580688272636 16/2993 2/58 0.0372154064888144 1 lagging strand elongation YJR006W YJR043C GO:0006620 0.00167056465085199 5/2993 1/58 NA NA posttranslational protein targeting to membrane YBR171W GO:0000086 0.00735048446374875 22/2993 2/58 0.0665535175598902 1 G2/M transition of mitotic cell cycle YLR210W YPR119W GO:0030490 0.0106916137654527 32/2993 2/58 0.12658155088194 1 processing of 20S pre-rRNA YDR398W YGL120C GO:0000079 0.00467758102238557 14/2993 2/58 0.0289271535171693 1 regulation of cyclin-dependent protein kinase activity YLR210W YPR119W GO:0006338 0.0106916137654527 32/2993 1/58 NA NA chromatin remodeling YKL112W GO:0045786 0.000334112930170398 1/2993 1/58 NA NA negative regulation of progression through cell cycle YIL131C GO:0006260 0.00634814567323755 19/2993 1/58 NA NA DNA replication YKL112W GO:0006259 0.00267290344136318 8/2993 1/58 NA NA DNA metabolic process YCR010C GO:0006280 0.00300701637153358 9/2993 2/58 0.0121760665486679 1 mutagenesis YJR006W YJR043C GO:0009313 0.000334112930170398 1/2993 1/58 NA NA oligosaccharide catabolic process YGL156W GO:0000105 0.00467758102238557 14/2993 1/58 NA NA histidine biosynthetic process YBL068W GO:0006301 0.00400935516204477 12/2993 2/58 0.0215060973272623 1 postreplication repair YJR006W YJR043C GO:0042493 0.021049114600735 63/2993 2/58 0.34644020482749 1 response to drug YIL018W YJL080C GO:0008361 0.00634814567323755 19/2993 1/58 NA NA regulation of cell size YHR066W GO:0006468 0.0304042766455062 91/2993 1/58 NA NA protein amino acid phosphorylation YCR091W GO:0007047 0.021049114600735 63/2993 1/58 NA NA cell wall organization and biogenesis YMR307W GO:0046855 0.000668225860340795 2/2993 1/58 NA NA inositol phosphate dephosphorylation YHR046C GO:0000002 0.00701637153357835 21/2993 1/58 NA NA mitochondrial genome maintenance YMR211W GO:0006207 0.00167056465085199 5/2993 1/58 NA NA 'de novo' pyrimidine base biosynthetic process YBL068W GO:0006461 0.00601403274306716 18/2993 1/58 NA NA protein complex assembly YML019W GO:0045787 0.000668225860340795 2/2993 1/58 NA NA positive regulation of progression through cell cycle YIL131C GO:0006284 0.00300701637153358 9/2993 3/58 0.000534253321775918 0.051822572212264 base-excision repair YJR006W YJR043C YKL114C GO:0016567 0.00968927497494153 29/2993 2/58 0.107431424343308 1 protein ubiquitination YIL148W YPR072W GO:0006166 0.00167056465085199 5/2993 1/58 NA NA purine ribonucleoside salvage YBL068W GO:0042843 0.00133645172068159 4/2993 1/58 NA NA D-xylose catabolic process YJR096W GO:0006369 0.00233879051119278 7/2993 1/58 NA NA transcription termination from RNA polymerase II promoter YIL131C GO:0006450 0.00334112930170398 10/2993 1/58 NA NA regulation of translational fidelity YGR118W GO:0006368 0.0100233879051119 30/2993 2/58 0.113722808188703 1 RNA elongation from RNA polymerase II promoter YIL131C YPR072W GO:0051083 0.00167056465085199 5/2993 1/58 NA NA cotranslational protein folding YHR193C GO:0006357 0.0203808887403943 61/2993 1/58 NA NA regulation of transcription from RNA polymerase II promoter YPR072W GO:0000289 0.00233879051119278 7/2993 1/58 NA NA poly(A) tail shortening YPR072W GO:0006897 0.0183762111593719 55/2993 1/58 NA NA endocytosis YCR053W GO:0006974 0.00768459739391914 23/2993 1/58 NA NA response to DNA damage stimulus YNL178W GO:0009083 0.000668225860340795 2/2993 1/58 NA NA branched chain family amino acid catabolic process YHR208W GO:0018279 0.000668225860340795 2/2993 2/58 0.000369176920836676 0.0358101613211576 protein amino acid N-linked glycosylation via asparagine YJL002C YML019W GO:0006916 0.000334112930170398 1/2993 1/58 NA NA anti-apoptosis YLR150W GO:0006189 0.00200467758102239 6/2993 1/58 NA NA 'de novo' IMP biosynthetic process YBL068W GO:0009060 0.0123621784163047 37/2993 1/58 NA NA aerobic respiration YJL166W GO:0019236 0.000668225860340795 2/2993 1/58 NA NA response to pheromone YCR091W GO:0006446 0.00300701637153358 9/2993 1/58 NA NA regulation of translational initiation YKR026C GO:0007126 0.0113598396257935 34/2993 1/58 NA NA meiosis YCR010C GO:0006276 0.00167056465085199 5/2993 1/58 NA NA plasmid maintenance YMR211W GO:0007329 0.00133645172068159 4/2993 1/58 NA NA positive regulation of transcription from RNA polymerase II promoter by pheromones YHR084W GO:0006892 0.00100233879051119 3/2993 1/58 NA NA post-Golgi vesicle-mediated transport YLR372W GO:0000117 0.00100233879051119 3/2993 1/58 NA NA G2/M-specific transcription in mitotic cell cycle YIL131C GO:0006888 0.0106916137654527 32/2993 2/58 0.12658155088194 1 ER to Golgi vesicle-mediated transport YER074W YNR026C GO:0000750 0.00801871032408954 24/2993 1/58 NA NA pheromone-dependent signal transduction during conjugation with cellular fusion YJL080C GO:0006383 0.00701637153357835 21/2993 1/58 NA NA transcription from RNA polymerase III promoter YNL113W GO:0000723 0.0547945205479452 164/2993 5/58 0.209729874817194 1 telomere maintenance YGR118W YJR043C YKL114C YLR150W YLR372W Total number of genes: 2993 Total number of Study genes: 58 Total number of Study gene GMRG terms (pop non-singletons): 101 (97) Genes with GMRG information: 58 Genes with no GMRG information: These are: Bicluster # 24 GeneMerge v1.2; C:\AGO\AGB_FV_Sin_Traslape\GOAGB_FV_Sin_Traslapecluster24.txt Gene Association File: S_cerevisiae.BP Description File: GO.BP.use Population File: pop.txt Study File: C:\AGO\AGB_FV_Sin_Traslape\AGB_FV_Sin_Traslapecluster24.txt GMRG_Term Pop_freq Pop_frac Study_frac Raw_es e-score Description Contributing_genes GO:0030489 0.00233879051119278 7/2993 1/72 NA NA processing of 27S pre-rRNA YKR081C GO:0046470 0.000334112930170398 1/2993 1/72 NA NA phosphatidylcholine metabolic process YMR079W GO:0000747 0.00467758102238557 14/2993 1/72 NA NA conjugation with cellular fusion YGL099W GO:0030437 0.0113598396257935 34/2993 2/72 0.196397277407211 1 sporulation (sensu Fungi) YGL099W YMR079W GO:0006096 0.00534580688272636 16/2993 1/72 NA NA glycolysis YMR205C GO:0000162 0.00334112930170398 10/2993 1/72 NA NA tryptophan biosynthetic process YKL211C GO:0006289 0.00668225860340795 20/2993 1/72 NA NA nucleotide-excision repair YBR088C GO:0009082 0.00233879051119278 7/2993 1/72 NA NA branched chain family amino acid biosynthetic process YER086W GO:0008654 0.00434346809221517 13/2993 1/72 NA NA phospholipid biosynthetic process YBL039C GO:0007131 0.00567991981289676 17/2993 1/72 NA NA meiotic recombination YHL024W GO:0019740 0.00267290344136318 8/2993 1/72 NA NA nitrogen utilization YNR002C GO:0000707 0.00133645172068159 4/2993 1/72 NA NA meiotic DNA recombinase assembly YDR076W GO:0006914 0.00267290344136318 8/2993 1/72 NA NA autophagy YPR181C GO:0048017 0.00400935516204477 12/2993 1/72 NA NA inositol lipid-mediated signaling YKL212W GO:0000032 0.00267290344136318 8/2993 1/72 NA NA cell wall mannoprotein biosynthetic process YDL055C GO:0006432 0.000668225860340795 2/2993 1/72 NA NA phenylalanyl-tRNA aminoacylation YLR060W GO:0006094 0.00467758102238557 14/2993 1/72 NA NA gluconeogenesis YKR097W GO:0000184 0.00200467758102239 6/2993 1/72 NA NA mRNA catabolic process, nonsense-mediated decay YMR125W GO:0030433 0.00567991981289676 17/2993 1/72 NA NA ER-associated protein catabolic process YPR181C GO:0000027 0.0100233879051119 30/2993 3/72 0.034054720556363 1 ribosomal large subunit assembly and maintenance YKR081C YLR276C YOL077C GO:0006364 0.0106916137654527 32/2993 2/72 0.178869360336774 1 rRNA processing YDR365C YLR002C GO:0006348 0.0133645172068159 40/2993 1/72 NA NA chromatin silencing at telomere YBR088C GO:0000290 0.00233879051119278 7/2993 2/72 0.0110844581136708 1 deadenylation-dependent decapping YER035W YGL222C GO:0006893 0.00467758102238557 14/2993 1/72 NA NA Golgi to plasma membrane transport YMR079W GO:0009298 0.000668225860340795 2/2993 1/72 NA NA GDP-mannose biosynthetic process YDL055C GO:0006413 0.00935516204477113 28/2993 3/72 0.0284300012107474 1 translational initiation YGR054W YJL138C YKR059W GO:0006979 0.0126962913464751 38/2993 1/72 NA NA response to oxidative stress YPL091W GO:0005978 0.00200467758102239 6/2993 1/72 NA NA glycogen biosynthetic process YJL137C GO:0046488 0.000334112930170398 1/2993 1/72 NA NA phosphatidylinositol metabolic process YMR079W GO:0006412 0.0811894420314066 243/2993 9/72 0.12553727838564 1 translation YDL081C YGL135W YHR064C YIL018W YJL177W YJL189W YJL190C YLR264W YNL069C GO:0031118 0.00100233879051119 3/2993 1/72 NA NA rRNA pseudouridine synthesis YLR175W GO:0006606 0.00735048446374875 22/2993 1/72 NA NA protein import into nucleus YMR235C GO:0006487 0.0100233879051119 30/2993 1/72 NA NA protein amino acid N-linked glycosylation YGL027C GO:0008150 0.0180420982292015 54/2993 1/72 NA NA biological_process YNL130C GO:0006656 0.00233879051119278 7/2993 1/72 NA NA phosphatidylcholine biosynthetic process YNL130C GO:0006629 0.00367524223187437 11/2993 1/72 NA NA lipid metabolic process YDR058C GO:0006396 0.00200467758102239 6/2993 1/72 NA NA RNA processing YFL001W GO:0016072 0.000668225860340795 2/2993 1/72 NA NA rRNA metabolic process YMR235C GO:0006486 0.00634814567323755 19/2993 1/72 NA NA protein amino acid glycosylation YDL055C GO:0007059 0.00902104911460073 27/2993 1/72 NA NA chromosome segregation YBR156C GO:0006895 0.00133645172068159 4/2993 1/72 NA NA Golgi to endosome transport YIL048W GO:0008535 0.00133645172068159 4/2993 1/72 NA NA cytochrome c oxidase complex assembly YDR079W GO:0015696 0.00200467758102239 6/2993 1/72 NA NA ammonium transport YNR002C GO:0030473 0.00334112930170398 10/2993 1/72 NA NA nuclear migration, microtubule-mediated YML124C GO:0006116 0.00334112930170398 10/2993 1/72 NA NA NADH oxidation YGL256W GO:0009228 0.00400935516204477 12/2993 1/72 NA NA thiamin biosynthetic process YMR096W GO:0006279 0.00133645172068159 4/2993 1/72 NA NA premeiotic DNA synthesis YHL024W GO:0042254 0.0370865352489141 111/2993 11/72 4.99650881290867e-005 0.00509643898916684 ribosome biogenesis and assembly YBL024W YDL148C YDR365C YGL099W YGR123C YKR081C YLR002C YLR175W YLR276C YLR409C YOL077C GO:0006404 0.000334112930170398 1/2993 1/72 NA NA RNA import into nucleus YMR235C GO:0000730 0.00100233879051119 3/2993 1/72 NA NA DNA recombinase assembly YDR076W GO:0006591 0.000334112930170398 1/2993 1/72 NA NA ornithine metabolic process YJL088W GO:0006272 0.00434346809221517 13/2993 1/72 NA NA leading strand elongation YBR088C GO:0006810 0.0147009689274975 44/2993 1/72 NA NA transport YNL125C GO:0030466 0.00768459739391914 23/2993 1/72 NA NA chromatin silencing at silent mating-type cassette YBR088C GO:0006298 0.00567991981289676 17/2993 1/72 NA NA mismatch repair YBR088C GO:0000054 0.00167056465085199 5/2993 2/72 0.00544590496067478 0.555482305988827 ribosome export from nucleus YGL099W YMR235C GO:0006407 0.00868693618443034 26/2993 1/72 NA NA rRNA export from nucleus YMR235C GO:0006415 0.00100233879051119 3/2993 1/72 NA NA translational termination YBR143C GO:0006365 0.0200467758102239 60/2993 5/72 0.0136936557977843 1 35S primary transcript processing YDL148C YGL171W YLR175W YLR276C YLR409C GO:0030488 0.00367524223187437 11/2993 1/72 NA NA tRNA methylation YBL024W GO:0006429 0.000668225860340795 2/2993 1/72 NA NA leucyl-tRNA aminoacylation YPL160W GO:0008645 0.00534580688272636 16/2993 1/72 NA NA hexose transport YJL219W GO:0006273 0.00534580688272636 16/2993 1/72 NA NA lagging strand elongation YBR088C GO:0030491 0.00133645172068159 4/2993 1/72 NA NA heteroduplex formation YDR076W GO:0030490 0.0106916137654527 32/2993 1/72 NA NA processing of 20S pre-rRNA YDL148C GO:0006113 0.00167056465085199 5/2993 1/72 NA NA fermentation YGL256W GO:0006338 0.0106916137654527 32/2993 1/72 NA NA chromatin remodeling YDR190C GO:0006526 0.00334112930170398 10/2993 1/72 NA NA arginine biosynthetic process YJL088W GO:0007035 0.00534580688272636 16/2993 1/72 NA NA vacuolar acidification YLR447C GO:0008612 0.000334112930170398 1/2993 1/72 NA NA hypusine biosynthetic process from peptidyl-lysine YHR068W GO:0006280 0.00300701637153358 9/2993 1/72 NA NA mutagenesis YBR088C GO:0017157 0.000334112930170398 1/2993 1/72 NA NA regulation of exocytosis YKL212W GO:0000105 0.00467758102238557 14/2993 1/72 NA NA histidine biosynthetic process YIL020C GO:0006301 0.00400935516204477 12/2993 1/72 NA NA postreplication repair YBR088C GO:0000743 0.00100233879051119 3/2993 1/72 NA NA nuclear migration during conjugation with cellular fusion YML124C GO:0042493 0.021049114600735 63/2993 1/72 NA NA response to drug YIL018W GO:0000398 0.0173738723688607 52/2993 1/72 NA NA nuclear mRNA splicing, via spliceosome YMR125W GO:0006241 0.000668225860340795 2/2993 1/72 NA NA CTP biosynthetic process YBL039C GO:0045143 0.00100233879051119 3/2993 1/72 NA NA homologous chromosome segregation YML124C GO:0006468 0.0304042766455062 91/2993 2/72 0.650771298976773 1 protein amino acid phosphorylation YBR156C YJL006C GO:0000910 0.0113598396257935 34/2993 1/72 NA NA cytokinesis YBR143C GO:0006270 0.00835282325425994 25/2993 1/72 NA NA DNA replication initiation YLR002C GO:0008614 0.00133645172068159 4/2993 1/72 NA NA pyridoxine metabolic process YMR096W GO:0019856 0.000668225860340795 2/2993 1/72 NA NA pyrimidine base biosynthetic process YBL039C GO:0007047 0.021049114600735 63/2993 2/72 0.451213157678612 1 cell wall organization and biogenesis YGL027C YJL159W GO:0006886 0.00467758102238557 14/2993 1/72 NA NA intracellular protein transport YIL048W GO:0006474 0.00167056465085199 5/2993 1/72 NA NA N-terminal protein amino acid acetylation YHR013C GO:0045002 0.00167056465085199 5/2993 1/72 NA NA double-strand break repair via single-strand annealing YDR076W GO:0006284 0.00300701637153358 9/2993 1/72 NA NA base-excision repair YBR088C GO:0006448 0.000334112930170398 1/2993 1/72 NA NA regulation of translational elongation YPL048W GO:0006950 0.0180420982292015 54/2993 2/72 0.375012895957107 1 response to stress YIL101C YJR032W GO:0006414 0.00534580688272636 16/2993 1/72 NA NA translational elongation YDL081C GO:0042274 0.00233879051119278 7/2993 1/72 NA NA ribosomal small subunit biogenesis and assembly YDL148C GO:0006450 0.00334112930170398 10/2993 1/72 NA NA regulation of translational fidelity YHR064C GO:0006425 0.000334112930170398 1/2993 1/72 NA NA glutaminyl-tRNA aminoacylation YOR168W GO:0000070 0.0100233879051119 30/2993 1/72 NA NA mitotic sister chromatid segregation YML124C GO:0006357 0.0203808887403943 61/2993 2/72 0.43469987328625 1 regulation of transcription from RNA polymerase II promoter YDR190C YJL006C GO:0015914 0.00167056465085199 5/2993 1/72 NA NA phospholipid transport YMR079W GO:0006470 0.00902104911460073 27/2993 1/72 NA NA protein amino acid dephosphorylation YGR123C GO:0030435 0.00200467758102239 6/2993 1/72 NA NA sporulation YHL024W GO:0006281 0.0160374206481791 48/2993 1/72 NA NA DNA repair YML021C GO:0006890 0.00534580688272636 16/2993 1/72 NA NA retrograde vesicle-mediated transport, Golgi to ER YIL048W GO:0007034 0.00334112930170398 10/2993 1/72 NA NA vacuolar transport YLR447C GO:0009060 0.0123621784163047 37/2993 1/72 NA NA aerobic respiration YDR079W GO:0006446 0.00300701637153358 9/2993 1/72 NA NA regulation of translational initiation YJL138C GO:0007126 0.0113598396257935 34/2993 1/72 NA NA meiosis YHL024W GO:0006888 0.0106916137654527 32/2993 1/72 NA NA ER to Golgi vesicle-mediated transport YPR181C GO:0046856 0.00200467758102239 6/2993 1/72 NA NA phosphoinositide dephosphorylation YKL212W GO:0006887 0.00601403274306716 18/2993 1/72 NA NA exocytosis YKL212W GO:0000723 0.0547945205479452 164/2993 8/72 0.0410627886726939 1 telomere maintenance YBR156C YDL081C YGL135W YHR013C YJL190C YKR059W YLR264W YMR125W Total number of genes: 2993 Total number of Study genes: 72 Total number of Study gene GMRG terms (pop non-singletons): 110 (102) Genes with GMRG information: 71 Genes with no GMRG information: 1 These are: YFR031C-A Bicluster # 25 GeneMerge v1.2; C:\AGO\AGB_FV_Sin_Traslape\GOAGB_FV_Sin_Traslapecluster25.txt Gene Association File: S_cerevisiae.BP Description File: GO.BP.use Population File: pop.txt Study File: C:\AGO\AGB_FV_Sin_Traslape\AGB_FV_Sin_Traslapecluster25.txt GMRG_Term Pop_freq Pop_frac Study_frac Raw_es e-score Description Contributing_genes GO:0006997 0.00100233879051119 3/2993 1/67 NA NA nuclear organization and biogenesis YLR293C GO:0043248 0.00133645172068159 4/2993 1/67 NA NA proteasome assembly YOR056C GO:0006360 0.00801871032408954 24/2993 3/67 0.0155071117791776 0.852891147854767 transcription from RNA polymerase I promoter YJL148W YJR063W YPR110C GO:0007067 0.00200467758102239 6/2993 1/67 NA NA mitosis YBL009W GO:0000055 0.00200467758102239 6/2993 1/67 NA NA ribosomal large subunit export from nucleus YNR053C GO:0006421 0.000334112930170398 1/2993 1/67 NA NA asparaginyl-tRNA aminoacylation YHR019C GO:0006075 0.000668225860340795 2/2993 1/67 NA NA 1,3-beta-glucan biosynthetic process YLR342W GO:0006623 0.00668225860340795 20/2993 1/67 NA NA protein targeting to vacuole YOL082W GO:0017148 0.000668225860340795 2/2993 2/67 0.000493799257090081 0.0271589591399545 negative regulation of protein biosynthetic process YGL030W YOR276W GO:0000105 0.00467758102238557 14/2993 1/67 NA NA histidine biosynthetic process YER055C GO:0018195 0.000334112930170398 1/2993 1/67 NA NA peptidyl-arginine modification YBR034C GO:0007103 0.00334112930170398 10/2993 1/67 NA NA spindle pole body duplication in nuclear envelope YML031W GO:0006006 0.00467758102238557 14/2993 1/67 NA NA glucose metabolic process YJL155C GO:0042493 0.021049114600735 63/2993 1/67 NA NA response to drug YIL018W GO:0000398 0.0173738723688607 52/2993 1/67 NA NA nuclear mRNA splicing, via spliceosome YEL026W GO:0006468 0.0304042766455062 91/2993 1/67 NA NA protein amino acid phosphorylation YBL009W GO:0000027 0.0100233879051119 30/2993 2/67 0.144065164522166 1 ribosomal large subunit assembly and maintenance YDR418W YOL077C GO:0006364 0.0106916137654527 32/2993 2/67 0.159767744779413 1 rRNA processing YGL030W YLR293C GO:0000770 0.000334112930170398 1/2993 1/67 NA NA peptide pheromone export YKL209C GO:0007047 0.021049114600735 63/2993 1/67 NA NA cell wall organization and biogenesis YLR342W GO:0006413 0.00935516204477113 28/2993 1/67 NA NA translational initiation YJR007W GO:0006979 0.0126962913464751 38/2993 1/67 NA NA response to oxidative stress YKL026C GO:0006865 0.00501169395255596 15/2993 1/67 NA NA amino acid transport YBR132C GO:0006003 0.000668225860340795 2/2993 1/67 NA NA fructose 2,6-bisphosphate metabolic process YIL107C GO:0006412 0.0811894420314066 243/2993 33/67 1.57218215900502e-019 8.64700187452763e-018 translation YBR031W YDL191W YDR012W YDR025W YDR064W YDR418W YDR447C YDR450W YDR500C YER131W YGL030W YGL076C YGL123W YGL189C YHL001W YHR021C YHR203C YIL018W YJR145C YKL156W YKR094C YLR048W YLR061W YLR185W YLR388W YNL096C YNL178W YOR293W YOR312C YOR369C YPL081W YPL220W YPR043W GO:0000282 0.00300701637153358 9/2993 1/67 NA NA bud site selection YGR152C GO:0006606 0.00735048446374875 22/2993 1/67 NA NA protein import into nucleus YML031W GO:0015879 0.000334112930170398 1/2993 1/67 NA NA carnitine transport YBR132C GO:0006400 0.00634814567323755 19/2993 1/67 NA NA tRNA modification YNL292W GO:0008150 0.0180420982292015 54/2993 1/67 NA NA biological_process YLR342W GO:0006406 0.0136986301369863 41/2993 1/67 NA NA mRNA export from nucleus YBR034C GO:0006430 0.000668225860340795 2/2993 1/67 NA NA lysyl-tRNA aminoacylation YDR037W GO:0015846 0.00267290344136318 8/2993 1/67 NA NA polyamine transport YBR132C GO:0006970 0.0103575008352823 31/2993 1/67 NA NA response to osmotic stress YBR132C GO:0016567 0.00968927497494153 29/2993 1/67 NA NA protein ubiquitination YKR094C GO:0006950 0.0180420982292015 54/2993 1/67 NA NA response to stress YIL101C GO:0042274 0.00233879051119278 7/2993 1/67 NA NA ribosomal small subunit biogenesis and assembly YOR056C GO:0006110 0.000668225860340795 2/2993 1/67 NA NA regulation of glycolysis YIL107C GO:0006450 0.00334112930170398 10/2993 3/67 0.00115014479037085 0.0632579634703965 regulation of translational fidelity YDR025W YGL123W YPL081W GO:0006434 0.000668225860340795 2/2993 1/67 NA NA seryl-tRNA aminoacylation YDR023W GO:0006405 0.00167056465085199 5/2993 1/67 NA NA RNA export from nucleus YML031W GO:0042254 0.0370865352489141 111/2993 13/67 5.86348603093983e-007 3.22491731701691e-005 ribosome biogenesis and assembly YBR034C YDR165W YEL026W YJL148W YJR063W YKR060W YKR094C YMR093W YNR053C YOL077C YOR056C YOR312C YPR110C GO:0000028 0.00367524223187437 11/2993 3/67 0.00155621006377499 0.0855915535076245 ribosomal small subunit assembly and maintenance YDR025W YDR447C YLR048W GO:0006631 0.00400935516204477 12/2993 2/67 0.0281952505561715 1 fatty acid metabolic process YBR132C YOR100C GO:0007264 0.00701637153357835 21/2993 1/67 NA NA small GTPase mediated signal transduction YGR152C GO:0006897 0.0183762111593719 55/2993 1/67 NA NA endocytosis YLR342W GO:0042256 0.000334112930170398 1/2993 1/67 NA NA mature ribosome assembly YPR041W GO:0006974 0.00768459739391914 23/2993 1/67 NA NA response to DNA damage stimulus YNL178W GO:0042255 0.00133645172068159 4/2993 1/67 NA NA ribosome assembly YNR053C GO:0007121 0.00902104911460073 27/2993 1/67 NA NA bipolar bud site selection YGR152C GO:0006365 0.0200467758102239 60/2993 1/67 NA NA 35S primary transcript processing YKR060W GO:0030488 0.00367524223187437 11/2993 1/67 NA NA tRNA methylation YDR165W GO:0007020 0.00768459739391914 23/2993 1/67 NA NA microtubule nucleation YML031W GO:0007120 0.00534580688272636 16/2993 1/67 NA NA axial bud site selection YGR152C GO:0006446 0.00300701637153358 9/2993 2/67 0.0160583627665489 0.883209952160187 regulation of translational initiation YOR260W YPR041W GO:0007126 0.0113598396257935 34/2993 1/67 NA NA meiosis YBL009W GO:0006913 0.00233879051119278 7/2993 1/67 NA NA nucleocytoplasmic transport YLR293C GO:0048025 0.000334112930170398 1/2993 1/67 NA NA negative regulation of nuclear mRNA splicing, via spliceosome YGL030W GO:0030490 0.0106916137654527 32/2993 4/67 0.00514636602699674 0.283050131484821 processing of 20S pre-rRNA YEL026W YJR145C YMR093W YOR056C GO:0006383 0.00701637153357835 21/2993 1/67 NA NA transcription from RNA polymerase III promoter YPR110C GO:0000723 0.0547945205479452 164/2993 7/67 0.071351292853075 1 telomere maintenance YBR132C YDR418W YDR447C YDR450W YHR021C YHR203C YJR145C Total number of genes: 2993 Total number of Study genes: 67 Total number of Study gene GMRG terms (pop non-singletons): 61 (55) Genes with GMRG information: 66 Genes with no GMRG information: 1 These are: YBR084C-A Bicluster # 26 GeneMerge v1.2; C:\AGO\AGB_FV_Sin_Traslape\GOAGB_FV_Sin_Traslapecluster26.txt Gene Association File: S_cerevisiae.BP Description File: GO.BP.use Population File: pop.txt Study File: C:\AGO\AGB_FV_Sin_Traslape\AGB_FV_Sin_Traslapecluster26.txt GMRG_Term Pop_freq Pop_frac Study_frac Raw_es e-score Description Contributing_genes GO:0007124 0.0167056465085199 50/2993 1/72 NA NA pseudohyphal growth YIL131C GO:0045014 0.000668225860340795 2/2993 1/72 NA NA negative regulation of transcription by glucose YLR417W GO:0006360 0.00801871032408954 24/2993 2/72 0.112208488892939 1 transcription from RNA polymerase I promoter YJR063W YNL248C GO:0006066 0.000668225860340795 2/2993 1/72 NA NA alcohol metabolic process YER024W GO:0009082 0.00233879051119278 7/2993 1/72 NA NA branched chain family amino acid biosynthetic process YER086W GO:0007067 0.00200467758102239 6/2993 1/72 NA NA mitosis YGL021W GO:0015741 0.000334112930170398 1/2993 1/72 NA NA fumarate transport YJR095W GO:0001403 0.0100233879051119 30/2993 1/72 NA NA invasive growth (sensu Saccharomyces) YGL208W GO:0006423 0.000334112930170398 1/2993 1/72 NA NA cysteinyl-tRNA aminoacylation YNL247W GO:0006623 0.00668225860340795 20/2993 2/72 0.0820761712896888 1 protein targeting to vacuole YKR001C YLR417W GO:0006914 0.00267290344136318 8/2993 1/72 NA NA autophagy YPR181C GO:0006457 0.00868693618443034 26/2993 1/72 NA NA protein folding YJL111W GO:0048017 0.00400935516204477 12/2993 1/72 NA NA inositol lipid-mediated signaling YKL212W GO:0000032 0.00267290344136318 8/2993 1/72 NA NA cell wall mannoprotein biosynthetic process YDR245W GO:0006006 0.00467758102238557 14/2993 1/72 NA NA glucose metabolic process YKL038W GO:0030036 0.00567991981289676 17/2993 1/72 NA NA actin cytoskeleton organization and biogenesis YKR001C GO:0007165 0.00935516204477113 28/2993 1/72 NA NA signal transduction YGL208W GO:0030447 0.00434346809221517 13/2993 2/72 0.0375109978581844 1 filamentous growth YBR171W YMR307W GO:0030433 0.00567991981289676 17/2993 1/72 NA NA ER-associated protein catabolic process YPR181C GO:0030503 0.00367524223187437 11/2993 1/72 NA NA regulation of cell redox homeostasis YML028W GO:0000290 0.00233879051119278 7/2993 1/72 NA NA deadenylation-dependent decapping YNL118C GO:0007005 0.00367524223187437 11/2993 3/72 0.00191789847073421 0.207133034839295 mitochondrion organization and biogenesis YBR179C YLL001W YNL066W GO:0006413 0.00935516204477113 28/2993 1/72 NA NA translational initiation YNL062C GO:0006979 0.0126962913464751 38/2993 1/72 NA NA response to oxidative stress YML028W GO:0006098 0.00200467758102239 6/2993 1/72 NA NA pentose-phosphate shunt YPR074C GO:0006555 0.00467758102238557 14/2993 1/72 NA NA methionine metabolic process YER043C GO:0006534 0.000668225860340795 2/2993 1/72 NA NA cysteine metabolic process YNL247W GO:0001302 0.00701637153357835 21/2993 1/72 NA NA replicative cell aging YGL208W GO:0045944 0.0160374206481791 48/2993 1/72 NA NA positive regulation of transcription from RNA polymerase II promoter YMR280C GO:0006412 0.0811894420314066 243/2993 8/72 0.2262233187934 1 translation YBL092W YDR341C YLR344W YML026C YMR097C YNL096C YNL209W YNR022C GO:0006606 0.00735048446374875 22/2993 1/72 NA NA protein import into nucleus YMR235C GO:0006487 0.0100233879051119 30/2993 2/72 0.161614073103753 1 protein amino acid N-linked glycosylation YJL002C YML115C GO:0046324 0.000334112930170398 1/2993 1/72 NA NA regulation of glucose import YKL038W GO:0016072 0.000668225860340795 2/2993 1/72 NA NA rRNA metabolic process YMR235C GO:0000147 0.00400935516204477 12/2993 2/72 0.0322341018717518 1 actin cortical patch assembly YIL062C YKL013C GO:0006537 0.00400935516204477 12/2993 1/72 NA NA glutamate biosynthetic process YLR142W GO:0030473 0.00334112930170398 10/2993 2/72 0.0226692238723444 1 nuclear migration, microtubule-mediated YML085C YML124C GO:0006891 0.00467758102238557 14/2993 1/72 NA NA intra-Golgi vesicle-mediated transport YLR268W GO:0007535 0.00167056465085199 5/2993 1/72 NA NA donor selection YIL131C GO:0042254 0.0370865352489141 111/2993 4/72 0.276930225764868 1 ribosome biogenesis and assembly YJR063W YNL062C YNL247W YNL248C GO:0045053 0.00233879051119278 7/2993 2/72 0.0110844581136708 1 protein retention in Golgi YKR001C YLR417W GO:0000001 0.00634814567323755 19/2993 2/72 0.0750029990273197 1 mitochondrion inheritance YIL062C YKL013C GO:0006404 0.000334112930170398 1/2993 1/72 NA NA RNA import into nucleus YMR235C GO:0000902 0.00367524223187437 11/2993 1/72 NA NA cell morphogenesis YGR059W GO:0006810 0.0147009689274975 44/2993 1/72 NA NA transport YLR083C GO:0030466 0.00768459739391914 23/2993 2/72 0.104424972840111 1 chromatin silencing at silent mating-type cassette YIL131C YNL261W GO:0007569 0.000668225860340795 2/2993 1/72 NA NA cell aging YGL208W GO:0000054 0.00167056465085199 5/2993 1/72 NA NA ribosome export from nucleus YMR235C GO:0006407 0.00868693618443034 26/2993 1/72 NA NA rRNA export from nucleus YMR235C GO:0006365 0.0200467758102239 60/2993 2/72 0.426347038883995 1 35S primary transcript processing YGR195W YHR069C GO:0030488 0.00367524223187437 11/2993 1/72 NA NA tRNA methylation YNL062C GO:0006437 0.000668225860340795 2/2993 1/72 NA NA tyrosyl-tRNA aminoacylation YGR185C GO:0046688 0.000668225860340795 2/2993 1/72 NA NA response to copper ion YGL166W GO:0006402 0.00968927497494153 29/2993 5/72 0.000530452349643484 0.0572888537614962 mRNA catabolic process YBL026W YDR378C YGR195W YHR069C YNL118C GO:0045722 0.000668225860340795 2/2993 1/72 NA NA positive regulation of gluconeogenesis YMR280C GO:0006906 0.00768459739391914 23/2993 1/72 NA NA vesicle fusion YLR268W GO:0009437 0.00100233879051119 3/2993 1/72 NA NA carnitine metabolic process YER024W GO:0006620 0.00167056465085199 5/2993 1/72 NA NA posttranslational protein targeting to membrane YBR171W GO:0006379 0.00467758102238557 14/2993 2/72 0.0430933517498685 1 mRNA cleavage YLR277C YPR107C GO:0010133 0.000668225860340795 2/2993 1/72 NA NA proline catabolic process to glutamate YLR142W GO:0016925 0.00167056465085199 5/2993 1/72 NA NA protein sumoylation YDR510W GO:0045786 0.000334112930170398 1/2993 1/72 NA NA negative regulation of progression through cell cycle YIL131C GO:0051260 0.000334112930170398 1/2993 1/72 NA NA protein homooligomerization YLL001W GO:0007035 0.00534580688272636 16/2993 1/72 NA NA vacuolar acidification YOR270C GO:0006378 0.00501169395255596 15/2993 2/72 0.0489638541020402 1 mRNA polyadenylation YLR277C YPR107C GO:0006071 0.000668225860340795 2/2993 1/72 NA NA glycerol metabolic process YHL032C GO:0017157 0.000334112930170398 1/2993 1/72 NA NA regulation of exocytosis YKL212W GO:0007015 0.0163715335783495 49/2993 1/72 NA NA actin filament organization YDR245W GO:0000105 0.00467758102238557 14/2993 1/72 NA NA histidine biosynthetic process YBR248C GO:0006080 0.000668225860340795 2/2993 1/72 NA NA mannan metabolic process YDR245W GO:0000743 0.00100233879051119 3/2993 2/72 0.00168583224566083 0.18206988253137 nuclear migration during conjugation with cellular fusion YML085C YML124C GO:0015802 0.00133645172068159 4/2993 1/72 NA NA basic amino acid transport YNL270C GO:0007031 0.00534580688272636 16/2993 1/72 NA NA peroxisome organization and biogenesis YKR001C GO:0000398 0.0173738723688607 52/2993 2/72 0.357496473315299 1 nuclear mRNA splicing, via spliceosome YBL026W YDR378C GO:0045143 0.00100233879051119 3/2993 2/72 0.00168583224566083 0.18206988253137 homologous chromosome segregation YML085C YML124C GO:0008361 0.00634814567323755 19/2993 1/72 NA NA regulation of cell size YNL248C GO:0031087 0.000334112930170398 1/2993 1/72 NA NA deadenylation-independent decapping YNL118C GO:0006468 0.0304042766455062 91/2993 3/72 0.375652849963235 1 protein amino acid phosphorylation YGL021W YGL208W YLL019C GO:0006270 0.00835282325425994 25/2993 1/72 NA NA DNA replication initiation YNL261W GO:0006696 0.00768459739391914 23/2993 1/72 NA NA ergosterol biosynthetic process YGR175C GO:0007047 0.021049114600735 63/2993 2/72 0.451213157678612 1 cell wall organization and biogenesis YGR059W YMR307W GO:0008053 0.00100233879051119 3/2993 1/72 NA NA mitochondrial fusion YBR179C GO:0016481 0.00167056465085199 5/2993 1/72 NA NA negative regulation of transcription YKL038W GO:0007010 0.00467758102238557 14/2993 1/72 NA NA cytoskeleton organization and biogenesis YJL111W GO:0006367 0.0147009689274975 44/2993 2/72 0.28607394268667 1 transcription initiation from RNA polymerase II promoter YGL166W YPR025C GO:0043162 0.00133645172068159 4/2993 1/72 NA NA ubiquitin-dependent protein catabolic process via the multivesicular body pathway YLR417W GO:0006461 0.00601403274306716 18/2993 1/72 NA NA protein complex assembly YOR270C GO:0045787 0.000668225860340795 2/2993 1/72 NA NA positive regulation of progression through cell cycle YIL131C GO:0006355 0.00768459739391914 23/2993 1/72 NA NA regulation of transcription, DNA-dependent YFL028C GO:0006369 0.00233879051119278 7/2993 1/72 NA NA transcription termination from RNA polymerase II promoter YIL131C GO:0043330 0.00233879051119278 7/2993 1/72 NA NA response to exogenous dsRNA YGR195W GO:0016259 0.000334112930170398 1/2993 1/72 NA NA selenocysteine metabolic process YER043C GO:0006450 0.00334112930170398 10/2993 1/72 NA NA regulation of translational fidelity YNL209W GO:0042149 0.00133645172068159 4/2993 1/72 NA NA cellular response to glucose starvation YGL208W GO:0006434 0.000668225860340795 2/2993 1/72 NA NA seryl-tRNA aminoacylation YDR023W GO:0016192 0.00968927497494153 29/2993 2/72 0.15311011626723 1 vesicle-mediated transport YER136W YPR029C GO:0006368 0.0100233879051119 30/2993 1/72 NA NA RNA elongation from RNA polymerase II promoter YIL131C GO:0009127 0.000334112930170398 1/2993 1/72 NA NA purine nucleoside monophosphate biosynthetic process YBR248C GO:0051083 0.00167056465085199 5/2993 2/72 0.00544590496067478 0.588157735752876 cotranslational protein folding YNL209W YPL037C GO:0000070 0.0100233879051119 30/2993 2/72 0.161614073103753 1 mitotic sister chromatid segregation YML085C YML124C GO:0006635 0.00300701637153358 9/2993 1/72 NA NA fatty acid beta-oxidation YKR009C GO:0006797 0.000334112930170398 1/2993 1/72 NA NA polyphosphate metabolic process YOR270C GO:0006631 0.00400935516204477 12/2993 1/72 NA NA fatty acid metabolic process YGR037C GO:0015727 0.000334112930170398 1/2993 1/72 NA NA lactate transport YKL217W GO:0042255 0.00133645172068159 4/2993 1/72 NA NA ribosome assembly YMR097C GO:0000266 0.000668225860340795 2/2993 1/72 NA NA mitochondrial fission YLL001W GO:0030476 0.00567991981289676 17/2993 1/72 NA NA spore wall assembly (sensu Fungi) YGR059W GO:0015909 0.000334112930170398 1/2993 1/72 NA NA long-chain fatty acid transport YGR037C GO:0007070 0.00267290344136318 8/2993 1/72 NA NA negative regulation of transcription from RNA polymerase II promoter, mitotic YPR025C GO:0018279 0.000668225860340795 2/2993 1/72 NA NA protein amino acid N-linked glycosylation via asparagine YJL002C GO:0006890 0.00534580688272636 16/2993 1/72 NA NA retrograde vesicle-mediated transport, Golgi to ER YLR268W GO:0006491 0.00133645172068159 4/2993 1/72 NA NA N-glycan processing YDR245W GO:0007034 0.00334112930170398 10/2993 1/72 NA NA vacuolar transport YKR001C GO:0006267 0.00434346809221517 13/2993 1/72 NA NA pre-replicative complex formation YNL261W GO:0006446 0.00300701637153358 9/2993 1/72 NA NA regulation of translational initiation YGR083C GO:0000753 0.00200467758102239 6/2993 1/72 NA NA cellular morphogenesis during conjugation with cellular fusion YGR059W GO:0000117 0.00100233879051119 3/2993 1/72 NA NA G2/M-specific transcription in mitotic cell cycle YIL131C GO:0006888 0.0106916137654527 32/2993 2/72 0.178869360336774 1 ER to Golgi vesicle-mediated transport YLR268W YPR181C GO:0046856 0.00200467758102239 6/2993 1/72 NA NA phosphoinositide dephosphorylation YKL212W GO:0015744 0.000334112930170398 1/2993 1/72 NA NA succinate transport YJR095W GO:0006887 0.00601403274306716 18/2993 1/72 NA NA exocytosis YKL212W GO:0000723 0.0547945205479452 164/2993 1/72 NA NA telomere maintenance YLR417W Total number of genes: 2993 Total number of Study genes: 72 Total number of Study gene GMRG terms (pop non-singletons): 122 (108) Genes with GMRG information: 72 Genes with no GMRG information: These are: Bicluster # 27 GeneMerge v1.2; C:\AGO\AGB_FV_Sin_Traslape\GOAGB_FV_Sin_Traslapecluster27.txt Gene Association File: S_cerevisiae.BP Description File: GO.BP.use Population File: pop.txt Study File: C:\AGO\AGB_FV_Sin_Traslape\AGB_FV_Sin_Traslapecluster27.txt GMRG_Term Pop_freq Pop_frac Study_frac Raw_es e-score Description Contributing_genes GO:0030489 0.00233879051119278 7/2993 2/54 0.00633239148016509 0.379943488809905 processing of 27S pre-rRNA YGL120C YNL002C GO:0006123 0.00233879051119278 7/2993 1/54 NA NA mitochondrial electron transport, cytochrome c to oxygen YHR051W GO:0006308 0.000334112930170398 1/2993 1/54 NA NA DNA catabolic process YJL208C GO:0006360 0.00801871032408954 24/2993 1/54 NA NA transcription from RNA polymerase I promoter YOR210W GO:0000162 0.00334112930170398 10/2993 1/54 NA NA tryptophan biosynthetic process YHL011C GO:0006672 0.000668225860340795 2/2993 1/54 NA NA ceramide metabolic process YBR183W GO:0006421 0.000334112930170398 1/2993 1/54 NA NA asparaginyl-tRNA aminoacylation YHR019C GO:0006423 0.000334112930170398 1/2993 1/54 NA NA cysteinyl-tRNA aminoacylation YNL247W GO:0000096 0.00200467758102239 6/2993 1/54 NA NA sulfur amino acid metabolic process YPL273W GO:0042273 0.00200467758102239 6/2993 3/54 0.00010691865973795 0.00641511958427701 ribosomal large subunit biogenesis and assembly YGL120C YHR052W YNL002C GO:0006122 0.00233879051119278 7/2993 1/54 NA NA mitochondrial electron transport, ubiquinol to cytochrome c YJL166W GO:0006457 0.00868693618443034 26/2993 1/54 NA NA protein folding YIL142W GO:0048017 0.00400935516204477 12/2993 1/54 NA NA inositol lipid-mediated signaling YOL065C GO:0000032 0.00267290344136318 8/2993 1/54 NA NA cell wall mannoprotein biosynthetic process YDR245W GO:0000027 0.0100233879051119 30/2993 2/54 0.10086728329659 1 ribosomal large subunit assembly and maintenance YDR418W YOR063W GO:0006364 0.0106916137654527 32/2993 3/54 0.0190348952117661 1 rRNA processing YGL030W YGL120C YMR229C GO:0006413 0.00935516204477113 28/2993 2/54 0.0896465596257387 1 translational initiation YKR059W YPR163C GO:0006979 0.0126962913464751 38/2993 2/54 0.149062963624792 1 response to oxidative stress YBR006W YIR037W GO:0006534 0.000668225860340795 2/2993 1/54 NA NA cysteine metabolic process YNL247W GO:0006412 0.0811894420314066 243/2993 18/54 8.61602382213214e-008 5.16961429327929e-006 translation YBL087C YBR189W YDR341C YDR418W YGL030W YGL076C YGL123W YHL001W YHR010W YIL133C YKR057W YKR094C YLR048W YLR167W YML063W YMR142C YOR063W YPR043W GO:0006310 0.00467758102238557 14/2993 1/54 NA NA DNA recombination YJL208C GO:0006430 0.000668225860340795 2/2993 1/54 NA NA lysyl-tRNA aminoacylation YDR037W GO:0015846 0.00267290344136318 8/2993 1/54 NA NA polyamine transport YBR132C GO:0006970 0.0103575008352823 31/2993 1/54 NA NA response to osmotic stress YBR132C GO:0000391 0.00100233879051119 3/2993 1/54 NA NA U2-dependent spliceosome disassembly YGL120C GO:0042254 0.0370865352489141 111/2993 12/54 3.45640676382587e-007 2.07384405829552e-005 ribosome biogenesis and assembly YDR324C YGL120C YHL011C YHR052W YJL208C YKR094C YLR167W YLR249W YMR229C YNL002C YNL247W YPL212C GO:0008277 0.000334112930170398 1/2993 1/54 NA NA regulation of G-protein coupled receptor protein signaling pathway YDR085C GO:0006401 0.00133645172068159 4/2993 1/54 NA NA RNA catabolic process YJL208C GO:0006365 0.0200467758102239 60/2993 3/54 0.0925334188459963 1 35S primary transcript processing YGL120C YLL011W YMR229C GO:0030163 0.00233879051119278 7/2993 1/54 NA NA protein catabolic process YHR052W GO:0030490 0.0106916137654527 32/2993 4/54 0.00234077476880417 0.14044648612825 processing of 20S pre-rRNA YDR324C YGL120C YLL011W YMR229C GO:0000154 0.00367524223187437 11/2993 1/54 NA NA rRNA modification YLL011W GO:0007015 0.0163715335783495 49/2993 1/54 NA NA actin filament organization YDR245W GO:0017148 0.000668225860340795 2/2993 2/54 0.000319595991359521 0.0191757594815713 negative regulation of protein biosynthetic process YGL030W YOR276W GO:0006538 0.000668225860340795 2/2993 1/54 NA NA glutamate catabolic process YBR006W GO:0000105 0.00467758102238557 14/2993 2/54 0.0253105161679709 1 histidine biosynthetic process YHL011C YIL020C GO:0006080 0.000668225860340795 2/2993 1/54 NA NA mannan metabolic process YDR245W GO:0008361 0.00634814567323755 19/2993 1/54 NA NA regulation of cell size YHL011C GO:0006865 0.00501169395255596 15/2993 1/54 NA NA amino acid transport YBR132C GO:0006400 0.00634814567323755 19/2993 1/54 NA NA tRNA modification YPL212C GO:0015879 0.000334112930170398 1/2993 1/54 NA NA carnitine transport YBR132C GO:0007010 0.00467758102238557 14/2993 1/54 NA NA cytoskeleton organization and biogenesis YIL142W GO:0006207 0.00167056465085199 5/2993 1/54 NA NA 'de novo' pyrimidine base biosynthetic process YHL011C GO:0043162 0.00133645172068159 4/2993 1/54 NA NA ubiquitin-dependent protein catabolic process via the multivesicular body pathway YKL034W GO:0006166 0.00167056465085199 5/2993 1/54 NA NA purine ribonucleoside salvage YHL011C GO:0016567 0.00968927497494153 29/2993 3/54 0.014565282541311 0.87391695247866 protein ubiquitination YKL034W YKR094C YLR167W GO:0006414 0.00534580688272636 16/2993 3/54 0.00263362013861457 0.158017208316874 translational elongation YDR385W YKL081W YLR249W GO:0006434 0.000668225860340795 2/2993 1/54 NA NA seryl-tRNA aminoacylation YDR023W GO:0006450 0.00334112930170398 10/2993 2/54 0.0131064360208522 0.786386161251129 regulation of translational fidelity YBR189W YGL123W GO:0006530 0.00167056465085199 5/2993 1/54 NA NA asparagine catabolic process YDR321W GO:0000028 0.00367524223187437 11/2993 2/54 0.0158351449875215 0.950108699251288 ribosomal small subunit assembly and maintenance YLR048W YLR167W GO:0006631 0.00400935516204477 12/2993 1/54 NA NA fatty acid metabolic process YBR132C GO:0030476 0.00567991981289676 17/2993 1/54 NA NA spore wall assembly (sensu Fungi) YDR096W GO:0000767 0.000668225860340795 2/2993 1/54 NA NA cellular morphogenesis during conjugation YDR085C GO:0006873 0.00367524223187437 11/2993 1/54 NA NA cell ion homeostasis YOR267C GO:0009060 0.0123621784163047 37/2993 1/54 NA NA aerobic respiration YJL166W GO:0006189 0.00200467758102239 6/2993 1/54 NA NA 'de novo' IMP biosynthetic process YHL011C GO:0006491 0.00133645172068159 4/2993 1/54 NA NA N-glycan processing YDR245W GO:0006366 0.0140327430671567 42/2993 1/54 NA NA transcription from RNA polymerase II promoter YOR210W GO:0006644 0.00267290344136318 8/2993 1/54 NA NA phospholipid metabolic process YDR096W GO:0048025 0.000334112930170398 1/2993 1/54 NA NA negative regulation of nuclear mRNA splicing, via spliceosome YGL030W GO:0000750 0.00801871032408954 24/2993 1/54 NA NA pheromone-dependent signal transduction during conjugation with cellular fusion YDR085C GO:0046856 0.00200467758102239 6/2993 1/54 NA NA phosphoinositide dephosphorylation YOL065C GO:0000723 0.0547945205479452 164/2993 6/54 0.0723567120406251 1 telomere maintenance YBR132C YDR418W YHL011C YKR057W YKR059W YMR142C GO:0006887 0.00601403274306716 18/2993 1/54 NA NA exocytosis YOL065C GO:0006383 0.00701637153357835 21/2993 1/54 NA NA transcription from RNA polymerase III promoter YOR210W Total number of genes: 2993 Total number of Study genes: 54 Total number of Study gene GMRG terms (pop non-singletons): 66 (60) Genes with GMRG information: 54 Genes with no GMRG information: These are: